Query 026295
Match_columns 240
No_of_seqs 271 out of 1222
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 10:09:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026295.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026295hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pm7_B Protein transport prote 100.0 2.2E-34 7.6E-39 221.8 24.7 208 1-238 1-216 (297)
2 4gqb_B Methylosome protein 50; 100.0 9.2E-35 3.2E-39 228.3 22.4 187 5-239 123-312 (344)
3 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-33 6.5E-38 221.0 26.5 197 3-239 9-207 (345)
4 2ynn_A Coatomer subunit beta'; 100.0 1.2E-33 4.1E-38 218.4 24.8 190 2-237 6-195 (304)
5 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.9E-32 1.3E-36 213.5 28.8 197 6-239 58-265 (345)
6 1vyh_C Platelet-activating fac 100.0 6E-33 2.1E-37 222.9 23.0 186 4-238 103-288 (410)
7 2hes_X YDR267CP; beta-propelle 100.0 4E-32 1.4E-36 212.2 26.6 200 3-238 8-209 (330)
8 3frx_A Guanine nucleotide-bind 100.0 2E-32 6.8E-37 213.0 24.6 197 3-239 11-209 (319)
9 3frx_A Guanine nucleotide-bind 100.0 1.6E-32 5.4E-37 213.5 23.8 187 4-239 60-250 (319)
10 3ow8_A WD repeat-containing pr 100.0 1E-32 3.5E-37 214.8 22.4 186 5-239 118-303 (321)
11 3bg1_A Protein SEC13 homolog; 100.0 5.5E-33 1.9E-37 215.8 20.1 205 4-238 8-224 (316)
12 3ow8_A WD repeat-containing pr 100.0 2.7E-32 9.4E-37 212.4 23.3 187 4-239 75-261 (321)
13 2ynn_A Coatomer subunit beta'; 100.0 6.3E-32 2.1E-36 208.8 25.0 191 4-239 92-283 (304)
14 2hes_X YDR267CP; beta-propelle 100.0 2.4E-31 8.1E-36 207.8 28.2 200 8-238 57-262 (330)
15 4ery_A WD repeat-containing pr 100.0 4.2E-32 1.4E-36 210.2 23.7 188 4-239 18-205 (312)
16 1vyh_C Platelet-activating fac 100.0 5.8E-32 2E-36 217.2 25.1 190 3-239 186-393 (410)
17 2pbi_B Guanine nucleotide-bind 100.0 1.3E-31 4.4E-36 211.2 26.0 190 5-239 150-339 (354)
18 4gqb_B Methylosome protein 50; 100.0 1.4E-31 4.9E-36 210.1 26.0 187 8-239 81-270 (344)
19 2pm7_B Protein transport prote 100.0 1.5E-31 5.1E-36 206.0 25.2 207 4-239 48-267 (297)
20 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-31 1.5E-35 206.2 27.8 229 2-239 4-319 (351)
21 1got_B GT-beta; complex (GTP-b 100.0 2.7E-31 9.3E-36 208.3 26.7 191 3-239 49-239 (340)
22 3jrp_A Fusion protein of prote 100.0 4.3E-31 1.5E-35 208.9 26.9 205 2-238 4-218 (379)
23 4g56_B MGC81050 protein; prote 100.0 3E-32 1E-36 215.1 19.4 183 6-237 136-322 (357)
24 1got_B GT-beta; complex (GTP-b 100.0 2.8E-31 9.4E-36 208.2 24.6 188 4-239 138-325 (340)
25 2pbi_B Guanine nucleotide-bind 100.0 3.1E-31 1E-35 209.1 24.6 197 3-239 58-297 (354)
26 2xzm_R RACK1; ribosome, transl 100.0 1.7E-30 6E-35 203.9 27.7 196 3-239 15-226 (343)
27 1nr0_A Actin interacting prote 100.0 3.6E-31 1.2E-35 222.6 24.8 199 4-239 54-337 (611)
28 2xzm_R RACK1; ribosome, transl 100.0 1.7E-30 5.9E-35 203.9 26.2 184 4-238 71-267 (343)
29 4e54_B DNA damage-binding prot 100.0 6.7E-32 2.3E-36 218.4 18.1 191 5-239 115-309 (435)
30 3bg1_A Protein SEC13 homolog; 100.0 2.7E-31 9.1E-36 206.3 19.2 206 4-239 52-275 (316)
31 3dwl_C Actin-related protein 2 100.0 3.7E-31 1.3E-35 209.8 19.2 202 3-238 49-263 (377)
32 3iz6_a 40S ribosomal protein R 100.0 1.8E-31 6E-36 212.4 15.6 197 3-239 60-262 (380)
33 4ery_A WD repeat-containing pr 100.0 1E-29 3.6E-34 196.7 25.0 122 4-141 60-181 (312)
34 1nr0_A Actin interacting prote 100.0 6.6E-30 2.3E-34 214.9 24.9 197 4-238 142-379 (611)
35 1erj_A Transcriptional repress 100.0 5.7E-30 1.9E-34 204.5 22.9 189 7-239 62-269 (393)
36 4aow_A Guanine nucleotide-bind 100.0 2.7E-29 9.1E-34 196.1 25.5 195 4-239 33-228 (340)
37 3dm0_A Maltose-binding peripla 100.0 1.2E-29 4.2E-34 216.2 25.4 197 4-239 377-574 (694)
38 3dwl_C Actin-related protein 2 100.0 1.1E-30 3.7E-35 207.1 16.0 199 6-239 8-218 (377)
39 1erj_A Transcriptional repress 100.0 6.7E-29 2.3E-33 198.3 26.1 184 11-239 125-323 (393)
40 2ymu_A WD-40 repeat protein; u 100.0 1.3E-29 4.4E-34 211.4 22.9 183 4-239 380-562 (577)
41 3jro_A Fusion protein of prote 100.0 3E-29 1E-33 215.5 25.4 206 1-238 1-216 (753)
42 3dm0_A Maltose-binding peripla 100.0 6.9E-30 2.4E-34 217.7 20.9 187 4-238 425-614 (694)
43 3iz6_a 40S ribosomal protein R 100.0 2.7E-30 9.1E-35 205.6 17.2 199 4-239 152-357 (380)
44 3ei3_B DNA damage-binding prot 100.0 5.7E-29 1.9E-33 197.8 24.8 191 4-239 68-264 (383)
45 4g56_B MGC81050 protein; prote 100.0 9.9E-30 3.4E-34 200.7 19.7 196 5-239 38-239 (357)
46 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-29 7.2E-34 201.7 21.5 193 5-239 77-280 (402)
47 3jrp_A Fusion protein of prote 100.0 2.3E-28 8E-33 193.2 26.9 204 4-239 50-269 (379)
48 3mmy_A MRNA export factor; mRN 100.0 9.2E-29 3.1E-33 194.7 24.1 125 4-141 34-161 (368)
49 4h5i_A Guanine nucleotide-exch 100.0 6.2E-29 2.1E-33 196.7 23.1 188 8-239 132-325 (365)
50 2ymu_A WD-40 repeat protein; u 100.0 4.3E-29 1.5E-33 208.2 23.1 193 4-239 11-234 (577)
51 3k26_A Polycomb protein EED; W 100.0 5.4E-29 1.8E-33 196.0 20.7 205 8-239 68-348 (366)
52 3dw8_B Serine/threonine-protei 100.0 2.6E-28 9E-33 197.4 23.8 200 7-239 26-298 (447)
53 3zwl_B Eukaryotic translation 100.0 3.7E-28 1.3E-32 191.3 23.7 195 4-239 27-231 (369)
54 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-29 1.6E-33 205.4 19.1 193 5-239 203-410 (524)
55 1k8k_C P40, ARP2/3 complex 41 100.0 7.5E-28 2.6E-32 190.1 24.6 197 5-239 4-215 (372)
56 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-28 8E-33 211.3 22.7 188 2-236 6-194 (814)
57 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-27 7.4E-32 187.4 26.0 197 4-238 47-256 (372)
58 3vl1_A 26S proteasome regulato 100.0 2.4E-28 8.2E-33 196.2 20.5 192 10-239 98-303 (420)
59 1gxr_A ESG1, transducin-like e 100.0 2.5E-27 8.6E-32 184.4 25.3 184 7-239 95-278 (337)
60 1gxr_A ESG1, transducin-like e 100.0 1.6E-27 5.6E-32 185.5 23.3 188 6-239 48-237 (337)
61 4aez_A CDC20, WD repeat-contai 100.0 1.5E-27 5.1E-32 190.9 22.9 182 8-239 133-316 (401)
62 3vl1_A 26S proteasome regulato 100.0 1.3E-27 4.4E-32 191.9 22.0 186 5-236 135-345 (420)
63 2j04_B YDR362CP, TAU91; beta p 100.0 8E-29 2.7E-33 204.0 15.1 162 4-207 261-427 (524)
64 4gq1_A NUP37; propeller, trans 100.0 1.5E-28 5.1E-33 196.4 15.9 206 4-239 131-372 (393)
65 3sfz_A APAF-1, apoptotic pepti 100.0 3.1E-27 1.1E-31 212.6 25.4 165 5-209 611-775 (1249)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-27 1.2E-31 188.7 22.6 191 4-239 126-326 (402)
67 2xyi_A Probable histone-bindin 100.0 3.1E-27 1.1E-31 190.8 22.3 204 5-239 177-391 (430)
68 3ei3_B DNA damage-binding prot 100.0 7.4E-27 2.5E-31 185.6 23.4 172 6-215 115-289 (383)
69 2xyi_A Probable histone-bindin 100.0 1.2E-27 4.1E-32 193.2 19.1 204 5-239 124-334 (430)
70 3jro_A Fusion protein of prote 100.0 6.2E-27 2.1E-31 201.1 24.5 204 4-239 48-267 (753)
71 2j04_A TAU60, YPL007P, hypothe 100.0 3.9E-27 1.3E-31 191.6 21.8 185 7-238 83-279 (588)
72 1r5m_A SIR4-interacting protei 100.0 1.5E-26 5.2E-31 185.3 22.4 195 4-239 144-407 (425)
73 4gga_A P55CDC, cell division c 100.0 6E-26 2E-30 182.7 25.6 199 5-239 143-377 (420)
74 4a11_B DNA excision repair pro 100.0 1.8E-26 6.1E-31 184.1 22.4 201 4-239 38-258 (408)
75 4e54_B DNA damage-binding prot 100.0 1.2E-27 4.2E-32 193.4 15.7 169 5-211 160-330 (435)
76 3dw8_B Serine/threonine-protei 100.0 8.9E-27 3E-31 188.4 20.7 177 6-210 174-375 (447)
77 2oaj_A Protein SNI1; WD40 repe 100.0 6.2E-27 2.1E-31 204.2 21.0 186 5-239 13-224 (902)
78 3gre_A Serine/threonine-protei 100.0 8.1E-27 2.8E-31 188.4 20.2 197 6-237 60-268 (437)
79 1sq9_A Antiviral protein SKI8; 100.0 7.7E-27 2.6E-31 186.0 19.7 193 4-238 111-366 (397)
80 2pm9_A Protein WEB1, protein t 100.0 6.4E-27 2.2E-31 187.4 18.8 195 6-239 162-396 (416)
81 3i2n_A WD repeat-containing pr 100.0 2.2E-26 7.7E-31 180.5 21.4 199 4-239 106-334 (357)
82 3f3f_A Nucleoporin SEH1; struc 100.0 8.6E-26 2.9E-30 176.0 24.2 184 5-210 53-339 (351)
83 3zwl_B Eukaryotic translation 100.0 7.2E-26 2.5E-30 178.2 23.4 193 4-239 69-272 (369)
84 1r5m_A SIR4-interacting protei 99.9 3.2E-26 1.1E-30 183.4 21.6 180 8-238 107-301 (425)
85 3lrv_A PRE-mRNA-splicing facto 99.9 1.4E-26 4.7E-31 181.7 18.7 171 7-215 123-299 (343)
86 4aow_A Guanine nucleotide-bind 99.9 8E-26 2.7E-30 176.4 22.8 188 4-238 81-268 (340)
87 2pm9_A Protein WEB1, protein t 99.9 5.8E-27 2E-31 187.7 16.7 193 4-238 108-317 (416)
88 4h5i_A Guanine nucleotide-exch 99.9 4.7E-26 1.6E-30 180.2 21.6 166 7-209 174-344 (365)
89 3i2n_A WD repeat-containing pr 99.9 2.6E-26 8.8E-31 180.2 19.3 189 7-239 63-272 (357)
90 3v7d_B Cell division control p 99.9 2E-25 6.7E-30 181.6 25.0 191 4-237 157-363 (464)
91 3odt_A Protein DOA1; ubiquitin 99.9 2E-25 6.8E-30 172.1 23.8 184 3-238 12-196 (313)
92 3mkq_A Coatomer beta'-subunit; 99.9 5.1E-26 1.7E-30 196.7 22.7 190 3-239 49-241 (814)
93 3sfz_A APAF-1, apoptotic pepti 99.9 8.4E-26 2.9E-30 203.3 24.7 205 4-239 652-895 (1249)
94 3v7d_B Cell division control p 99.9 1.9E-25 6.6E-30 181.7 23.7 190 4-239 116-323 (464)
95 4a11_B DNA excision repair pro 99.9 2E-25 6.8E-30 178.0 23.2 174 7-210 97-278 (408)
96 1sq9_A Antiviral protein SKI8; 99.9 1.2E-25 4.1E-30 179.1 21.8 176 6-209 183-396 (397)
97 4aez_A CDC20, WD repeat-contai 99.9 1.6E-25 5.4E-30 179.2 22.6 187 4-239 171-362 (401)
98 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.5E-25 5.2E-30 181.9 22.4 195 7-239 100-320 (450)
99 1yfq_A Cell cycle arrest prote 99.9 2.2E-25 7.5E-30 174.1 22.2 210 5-239 7-264 (342)
100 4ggc_A P55CDC, cell division c 99.9 1.1E-24 3.6E-29 168.5 25.8 198 6-239 64-297 (318)
101 1pgu_A Actin interacting prote 99.9 3.1E-25 1.1E-29 185.9 24.0 191 4-238 58-264 (615)
102 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-26 7.5E-31 200.8 17.6 201 5-237 431-692 (902)
103 3odt_A Protein DOA1; ubiquitin 99.9 1.5E-24 5E-29 167.2 25.4 178 4-238 99-278 (313)
104 3gre_A Serine/threonine-protei 99.9 2.7E-25 9.4E-30 179.5 21.6 199 8-237 167-418 (437)
105 3k26_A Polycomb protein EED; W 99.9 1.3E-25 4.4E-30 176.7 18.5 195 6-236 15-241 (366)
106 2w18_A PALB2, fancn, partner a 99.9 1.3E-25 4.3E-30 172.6 17.4 158 6-206 175-355 (356)
107 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-24 4.6E-29 171.2 22.5 175 5-209 15-272 (355)
108 4gga_A P55CDC, cell division c 99.9 4E-24 1.4E-28 172.1 25.4 180 12-239 108-289 (420)
109 3lrv_A PRE-mRNA-splicing facto 99.9 1.8E-25 6.2E-30 175.3 16.7 185 10-239 77-273 (343)
110 4ggc_A P55CDC, cell division c 99.9 6E-24 2E-28 164.2 24.6 180 12-239 28-209 (318)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.8E-24 9.6E-29 174.4 23.6 199 7-237 147-365 (450)
112 1pgu_A Actin interacting prote 99.9 9.9E-25 3.4E-29 182.8 21.1 193 6-238 15-219 (615)
113 4gq1_A NUP37; propeller, trans 99.9 1.5E-25 5.3E-30 178.9 13.6 178 12-210 92-288 (393)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 8.2E-24 2.8E-28 171.3 23.1 182 5-238 235-419 (445)
115 2w18_A PALB2, fancn, partner a 99.9 3.1E-24 1E-28 164.9 18.8 182 10-239 112-339 (356)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.8E-23 1.3E-27 167.5 25.3 179 5-237 195-373 (445)
117 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-24 3.7E-29 177.4 15.8 189 6-235 12-235 (588)
118 1p22_A F-BOX/WD-repeat protein 99.9 5.1E-23 1.7E-27 166.3 24.4 179 4-236 168-346 (435)
119 1p22_A F-BOX/WD-repeat protein 99.9 6.1E-23 2.1E-27 165.8 23.5 176 7-236 131-306 (435)
120 3mmy_A MRNA export factor; mRN 99.9 1.5E-23 5.1E-28 164.9 17.5 170 3-208 80-346 (368)
121 1yfq_A Cell cycle arrest prote 99.9 1.9E-23 6.4E-28 163.1 17.5 204 4-239 94-305 (342)
122 2oit_A Nucleoporin 214KDA; NH2 99.9 8.3E-23 2.8E-27 165.0 14.6 192 10-238 37-252 (434)
123 3bws_A Protein LP49; two-domai 99.9 1.2E-21 4.2E-26 157.8 19.7 184 5-239 165-357 (433)
124 2oit_A Nucleoporin 214KDA; NH2 99.9 7.2E-22 2.5E-26 159.5 18.2 177 8-209 91-279 (434)
125 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-21 4.2E-26 154.3 18.9 166 22-210 148-338 (355)
126 1l0q_A Surface layer protein; 99.9 6.5E-21 2.2E-25 151.5 22.6 178 9-239 31-212 (391)
127 3bws_A Protein LP49; two-domai 99.9 1.5E-21 5.3E-26 157.2 15.3 179 10-239 123-315 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.8E-20 9.5E-25 149.5 21.2 185 4-239 173-366 (415)
129 1l0q_A Surface layer protein; 99.9 2.3E-19 7.7E-24 142.6 23.1 178 9-239 73-256 (391)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.7E-19 5.9E-24 144.9 19.2 180 5-237 218-408 (415)
131 1ri6_A Putative isomerase YBHE 99.8 8E-18 2.7E-22 131.0 25.3 200 7-239 35-243 (343)
132 2ojh_A Uncharacterized protein 99.8 4.7E-19 1.6E-23 134.9 17.6 188 5-239 37-229 (297)
133 2ecf_A Dipeptidyl peptidase IV 99.8 4.7E-18 1.6E-22 145.7 17.5 198 9-239 36-298 (741)
134 3hfq_A Uncharacterized protein 99.8 3.9E-16 1.3E-20 122.1 26.3 203 7-239 83-298 (347)
135 3hfq_A Uncharacterized protein 99.8 1.7E-16 5.7E-21 124.3 24.0 199 8-239 38-252 (347)
136 2ojh_A Uncharacterized protein 99.8 1E-17 3.5E-22 127.5 15.7 190 10-239 85-284 (297)
137 1ri6_A Putative isomerase YBHE 99.8 4.6E-16 1.6E-20 121.0 24.7 196 10-240 129-336 (343)
138 1xfd_A DIP, dipeptidyl aminope 99.8 1.3E-18 4.6E-23 148.7 10.5 200 11-238 18-266 (723)
139 3vgz_A Uncharacterized protein 99.8 1.3E-16 4.6E-21 124.7 21.0 177 12-239 143-326 (353)
140 3u4y_A Uncharacterized protein 99.8 1E-16 3.5E-21 124.5 19.6 187 9-239 40-233 (331)
141 3vgz_A Uncharacterized protein 99.7 1.9E-16 6.4E-21 123.9 19.4 185 8-239 39-243 (353)
142 1nir_A Nitrite reductase; hemo 99.7 7.1E-16 2.4E-20 127.8 23.2 161 11-210 180-357 (543)
143 1nir_A Nitrite reductase; hemo 99.7 5.3E-16 1.8E-20 128.5 21.5 187 16-239 144-336 (543)
144 1xfd_A DIP, dipeptidyl aminope 99.7 2.1E-17 7.3E-22 141.3 13.4 192 11-239 62-318 (723)
145 1k32_A Tricorn protease; prote 99.7 5.9E-17 2E-21 143.9 15.6 183 8-239 294-484 (1045)
146 3scy_A Hypothetical bacterial 99.7 9.6E-15 3.3E-19 114.9 26.5 190 11-235 156-360 (361)
147 2ecf_A Dipeptidyl peptidase IV 99.7 3.3E-16 1.1E-20 134.3 19.5 188 4-239 146-392 (741)
148 3u4y_A Uncharacterized protein 99.7 2.3E-15 8E-20 116.8 20.7 178 15-239 3-188 (331)
149 2z3z_A Dipeptidyl aminopeptida 99.7 1.6E-16 5.6E-21 135.5 14.9 194 5-239 116-368 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.7 1E-15 3.5E-20 130.6 19.0 184 12-239 183-413 (706)
151 3scy_A Hypothetical bacterial 99.7 3.8E-14 1.3E-18 111.4 26.3 204 8-239 48-271 (361)
152 1z68_A Fibroblast activation p 99.7 8E-17 2.7E-21 137.8 8.9 194 13-238 19-264 (719)
153 1pby_B Quinohemoprotein amine 99.7 3E-15 1E-19 116.1 16.7 111 11-140 35-163 (337)
154 1jof_A Carboxy-CIS,CIS-muconat 99.7 4E-14 1.4E-18 111.7 22.4 192 11-239 41-267 (365)
155 1k32_A Tricorn protease; prote 99.7 2E-15 7E-20 134.1 16.5 157 5-206 332-500 (1045)
156 1z68_A Fibroblast activation p 99.6 5.9E-16 2E-20 132.4 10.6 99 12-130 62-189 (719)
157 4a5s_A Dipeptidyl peptidase 4 99.6 2.1E-15 7.1E-20 129.5 13.2 111 10-140 17-141 (740)
158 1pby_B Quinohemoprotein amine 99.6 2.7E-14 9.1E-19 110.7 17.2 159 11-210 83-312 (337)
159 1jmx_B Amine dehydrogenase; ox 99.6 2.9E-14 9.9E-19 111.1 16.4 113 11-140 44-175 (349)
160 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.5E-12 5.2E-17 102.6 24.0 171 8-209 143-342 (365)
161 3pe7_A Oligogalacturonate lyas 99.6 1.6E-13 5.3E-18 108.8 18.4 191 5-239 26-250 (388)
162 3o4h_A Acylamino-acid-releasin 99.6 4.8E-14 1.6E-18 117.8 14.8 174 12-238 112-293 (582)
163 3o4h_A Acylamino-acid-releasin 99.6 3.9E-14 1.3E-18 118.4 13.3 177 5-238 59-257 (582)
164 1xip_A Nucleoporin NUP159; bet 99.5 1.2E-13 4.3E-18 108.8 13.9 175 11-238 39-225 (388)
165 1jmx_B Amine dehydrogenase; ox 99.5 5.5E-13 1.9E-17 103.9 16.8 154 14-210 4-177 (349)
166 4a5s_A Dipeptidyl peptidase 4 99.5 4.5E-13 1.6E-17 115.1 17.0 108 13-138 65-200 (740)
167 3fvz_A Peptidyl-glycine alpha- 99.5 1.3E-11 4.5E-16 95.9 20.1 192 10-236 24-250 (329)
168 3fvz_A Peptidyl-glycine alpha- 99.5 7.9E-12 2.7E-16 97.2 18.8 187 10-238 91-303 (329)
169 2oiz_A Aromatic amine dehydrog 99.5 9.5E-12 3.3E-16 98.0 19.4 69 14-89 54-140 (361)
170 2dg1_A DRP35, lactonase; beta 99.4 9.7E-11 3.3E-15 90.9 22.7 190 6-239 41-245 (333)
171 1xip_A Nucleoporin NUP159; bet 99.4 6.3E-12 2.2E-16 99.1 15.4 140 6-180 85-226 (388)
172 3azo_A Aminopeptidase; POP fam 99.4 3.4E-12 1.2E-16 108.1 14.5 155 14-208 81-272 (662)
173 1q7f_A NHL, brain tumor CG1071 99.4 6.9E-11 2.4E-15 89.8 19.7 155 10-208 121-280 (286)
174 3azo_A Aminopeptidase; POP fam 99.4 4.5E-12 1.5E-16 107.4 14.4 199 4-239 18-254 (662)
175 1q7f_A NHL, brain tumor CG1071 99.4 2.9E-10 9.8E-15 86.3 22.3 181 9-238 76-262 (286)
176 2xdw_A Prolyl endopeptidase; a 99.4 3.8E-11 1.3E-15 102.7 19.1 195 10-238 125-347 (710)
177 2gop_A Trilobed protease; beta 99.4 1.7E-10 5.7E-15 89.9 19.6 167 7-236 102-311 (347)
178 3e5z_A Putative gluconolactona 99.3 1.4E-10 4.9E-15 88.5 18.3 186 6-239 24-230 (296)
179 3c5m_A Oligogalacturonate lyas 99.3 2.8E-12 9.7E-17 101.6 8.0 184 12-239 38-250 (396)
180 3no2_A Uncharacterized protein 99.3 7.5E-11 2.6E-15 89.4 15.3 155 20-215 4-161 (276)
181 2gop_A Trilobed protease; beta 99.3 3.8E-10 1.3E-14 87.9 19.2 109 10-139 59-206 (347)
182 3e5z_A Putative gluconolactona 99.3 2.3E-10 7.9E-15 87.4 16.5 185 7-239 66-269 (296)
183 2dg1_A DRP35, lactonase; beta 99.3 1.6E-09 5.3E-14 84.0 21.4 192 8-239 85-292 (333)
184 3g4e_A Regucalcin; six bladed 99.3 4.4E-09 1.5E-13 80.4 23.1 189 8-239 52-254 (297)
185 3pe7_A Oligogalacturonate lyas 99.2 1.6E-10 5.3E-15 91.5 12.9 175 5-210 183-384 (388)
186 2xdw_A Prolyl endopeptidase; a 99.2 2.1E-09 7.2E-14 91.9 20.6 187 12-239 173-392 (710)
187 2bkl_A Prolyl endopeptidase; m 99.2 1.8E-10 6.3E-15 98.2 14.0 116 8-137 119-258 (695)
188 1rwi_B Serine/threonine-protei 99.2 4.1E-10 1.4E-14 84.6 13.9 179 10-239 67-246 (270)
189 1rwi_B Serine/threonine-protei 99.2 5.7E-10 1.9E-14 83.8 14.1 177 11-238 25-203 (270)
190 1qks_A Cytochrome CD1 nitrite 99.2 8.1E-09 2.8E-13 85.8 21.5 162 10-210 197-375 (567)
191 3dsm_A Uncharacterized protein 99.2 5.2E-09 1.8E-13 81.2 18.9 181 10-240 84-280 (328)
192 1qks_A Cytochrome CD1 nitrite 99.2 1.2E-08 4.1E-13 84.8 21.5 183 18-239 164-354 (567)
193 3dsm_A Uncharacterized protein 99.1 1.4E-08 4.6E-13 78.9 20.0 184 10-240 44-238 (328)
194 2z2n_A Virginiamycin B lyase; 99.1 2.8E-08 9.7E-13 75.4 20.5 182 7-238 12-194 (299)
195 3no2_A Uncharacterized protein 99.1 1.7E-08 5.9E-13 76.4 17.9 158 10-215 37-202 (276)
196 2bkl_A Prolyl endopeptidase; m 99.1 6.6E-09 2.3E-13 88.7 16.7 183 13-239 171-375 (695)
197 2ghs_A AGR_C_1268P; regucalcin 99.1 2.7E-07 9.2E-12 71.5 24.2 187 8-239 88-284 (326)
198 2z2n_A Virginiamycin B lyase; 99.1 1.2E-07 4.2E-12 71.8 21.8 180 9-238 56-236 (299)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.9E-07 6.6E-12 71.4 22.1 187 8-239 69-280 (314)
200 2oiz_A Aromatic amine dehydrog 99.0 1.3E-08 4.5E-13 80.1 15.2 144 20-208 14-182 (361)
201 1yr2_A Prolyl oligopeptidase; 99.0 3.1E-08 1E-12 85.2 18.6 186 10-235 163-372 (741)
202 3c5m_A Oligogalacturonate lyas 99.0 1.6E-08 5.6E-13 79.9 14.8 171 6-210 184-384 (396)
203 3hrp_A Uncharacterized protein 99.0 1.5E-07 5E-12 75.3 20.1 163 11-208 132-298 (409)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 9E-08 3.1E-12 73.3 18.1 162 10-208 117-299 (314)
205 3g4e_A Regucalcin; six bladed 98.9 1.1E-06 3.6E-11 67.1 22.6 184 11-238 14-210 (297)
206 2ece_A 462AA long hypothetical 98.9 5.4E-07 1.9E-11 71.8 21.1 199 11-240 139-394 (462)
207 2qc5_A Streptogramin B lactona 98.9 1.2E-06 4.2E-11 66.3 22.5 180 9-238 19-199 (300)
208 1yr2_A Prolyl oligopeptidase; 98.9 4.5E-07 1.5E-11 78.0 21.9 184 13-239 212-419 (741)
209 3dr2_A Exported gluconolactona 98.9 2.5E-07 8.4E-12 70.9 17.5 182 7-239 83-289 (305)
210 2qc5_A Streptogramin B lactona 98.9 1.8E-06 6.1E-11 65.4 22.1 179 10-238 62-241 (300)
211 2mad_H Methylamine dehydrogena 98.8 4.1E-06 1.4E-10 66.1 22.8 69 14-90 70-157 (373)
212 3iuj_A Prolyl endopeptidase; h 98.8 1.4E-07 4.9E-12 80.5 15.3 118 8-140 127-268 (693)
213 3dr2_A Exported gluconolactona 98.8 9.4E-07 3.2E-11 67.6 18.2 163 7-209 42-225 (305)
214 2qe8_A Uncharacterized protein 98.8 9.7E-07 3.3E-11 68.8 18.0 189 8-238 65-302 (343)
215 3sjl_D Methylamine dehydrogena 98.8 6.1E-07 2.1E-11 70.7 16.0 117 14-154 37-177 (386)
216 2ghs_A AGR_C_1268P; regucalcin 98.7 1.1E-05 3.6E-10 62.4 21.9 180 12-238 51-241 (326)
217 2mad_H Methylamine dehydrogena 98.7 2.6E-06 9E-11 67.2 18.5 106 16-140 27-156 (373)
218 2hz6_A Endoplasmic reticulum t 98.7 1.8E-09 6E-14 85.3 0.2 147 20-215 8-156 (369)
219 3sjl_D Methylamine dehydrogena 98.7 2.1E-06 7.3E-11 67.6 16.9 108 14-140 82-208 (386)
220 3nol_A Glutamine cyclotransfer 98.6 1.4E-05 4.7E-10 59.2 18.2 187 7-240 38-238 (262)
221 2iwa_A Glutamine cyclotransfer 98.6 1.5E-05 5.2E-10 59.5 18.7 189 7-240 16-219 (266)
222 2qe8_A Uncharacterized protein 98.6 6.9E-06 2.4E-10 63.9 16.8 119 8-140 15-154 (343)
223 3hrp_A Uncharacterized protein 98.5 8.7E-06 3E-10 65.0 16.8 166 9-206 218-408 (409)
224 2ece_A 462AA long hypothetical 98.5 3E-05 1E-09 61.9 19.0 182 19-239 93-333 (462)
225 3c75_H MADH, methylamine dehyd 98.5 8.7E-06 3E-10 65.1 15.3 152 14-209 122-296 (426)
226 2hz6_A Endoplasmic reticulum t 98.5 8.9E-09 3E-13 81.3 -2.1 159 12-215 40-199 (369)
227 3nok_A Glutaminyl cyclase; bet 98.4 2.9E-05 1E-09 57.6 16.3 189 7-240 50-248 (268)
228 3c75_H MADH, methylamine dehyd 98.4 1.4E-05 4.8E-10 63.9 15.6 113 19-155 82-218 (426)
229 3mbr_X Glutamine cyclotransfer 98.4 0.00018 6.2E-09 52.8 20.0 186 7-240 16-217 (243)
230 1mda_H Methylamine dehydrogena 98.4 3.2E-05 1.1E-09 60.7 17.2 68 14-88 69-157 (368)
231 1yiq_A Quinohemoprotein alcoho 98.3 6.5E-05 2.2E-09 64.1 16.8 70 14-90 239-339 (689)
232 3iuj_A Prolyl endopeptidase; h 98.2 0.00016 5.3E-09 61.8 18.3 182 13-239 178-383 (693)
233 1fwx_A Nitrous oxide reductase 98.2 0.00046 1.6E-08 57.1 19.1 186 20-238 100-342 (595)
234 1fwx_A Nitrous oxide reductase 98.2 3.3E-05 1.1E-09 63.8 12.4 162 10-208 134-361 (595)
235 1kb0_A Quinohemoprotein alcoho 98.1 0.00017 5.9E-09 61.4 16.0 71 13-90 246-347 (677)
236 1npe_A Nidogen, entactin; glyc 98.1 0.00089 3.1E-08 49.9 18.0 113 11-139 37-154 (267)
237 3qqz_A Putative uncharacterize 98.0 0.0024 8.3E-08 47.3 22.0 203 3-239 20-236 (255)
238 2iwa_A Glutamine cyclotransfer 97.9 0.0017 5.7E-08 48.5 16.1 157 20-210 74-239 (266)
239 1kb0_A Quinohemoprotein alcoho 97.9 0.00061 2.1E-08 58.0 15.3 76 80-180 457-532 (677)
240 1npe_A Nidogen, entactin; glyc 97.8 0.005 1.7E-07 45.7 20.2 178 10-238 79-262 (267)
241 1mda_H Methylamine dehydrogena 97.8 0.00011 3.8E-09 57.7 8.8 91 32-140 47-158 (368)
242 3hxj_A Pyrrolo-quinoline quino 97.7 0.001 3.6E-08 50.8 13.3 145 11-206 138-282 (330)
243 2xe4_A Oligopeptidase B; hydro 97.7 0.0017 5.9E-08 55.9 15.8 115 11-140 175-304 (751)
244 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0019 6.5E-08 50.6 15.0 153 20-215 52-214 (376)
245 3tc9_A Hypothetical hydrolase; 97.7 0.0061 2.1E-07 48.9 18.0 158 11-208 138-301 (430)
246 1yiq_A Quinohemoprotein alcoho 97.6 0.0026 9E-08 54.3 15.6 83 80-191 455-537 (689)
247 3mbr_X Glutamine cyclotransfer 97.6 0.0047 1.6E-07 45.3 14.6 142 20-191 73-223 (243)
248 3hxj_A Pyrrolo-quinoline quino 97.6 0.0017 5.9E-08 49.5 13.1 148 10-208 177-324 (330)
249 3nok_A Glutaminyl cyclase; bet 97.6 0.0063 2.1E-07 45.2 15.1 140 22-191 107-254 (268)
250 3nol_A Glutamine cyclotransfer 97.6 0.0095 3.2E-07 44.1 15.6 137 18-180 93-237 (262)
251 2fp8_A Strictosidine synthase; 97.4 0.016 5.4E-07 44.3 16.4 112 11-138 127-267 (322)
252 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.008 2.7E-07 47.0 14.7 136 21-205 239-375 (376)
253 2p9w_A MAL S 1 allergenic prot 97.4 0.02 6.9E-07 43.9 16.1 161 12-208 15-215 (334)
254 3ii7_A Kelch-like protein 7; p 97.3 0.015 5.2E-07 44.0 15.2 162 20-220 101-282 (306)
255 3v65_B Low-density lipoprotein 97.3 0.033 1.1E-06 43.9 16.8 158 11-208 117-277 (386)
256 2p4o_A Hypothetical protein; p 97.2 0.039 1.3E-06 41.8 21.5 185 10-239 72-270 (306)
257 1kv9_A Type II quinohemoprotei 97.2 0.017 5.7E-07 49.1 15.6 70 14-90 234-334 (668)
258 3v64_C Agrin; beta propeller, 97.2 0.05 1.7E-06 42.3 17.9 159 11-209 74-235 (349)
259 3v65_B Low-density lipoprotein 97.2 0.055 1.9E-06 42.7 17.0 110 12-139 79-189 (386)
260 1ijq_A LDL receptor, low-densi 97.2 0.05 1.7E-06 41.6 20.3 162 10-208 30-195 (316)
261 3v64_C Agrin; beta propeller, 97.1 0.057 2E-06 41.9 18.0 113 10-140 34-147 (349)
262 2vpj_A Kelch-like protein 12; 97.1 0.029 1E-06 42.3 14.8 162 20-220 112-288 (301)
263 1zgk_A Kelch-like ECH-associat 97.1 0.019 6.3E-07 43.7 13.4 162 20-220 121-297 (308)
264 2xbg_A YCF48-like protein; pho 97.1 0.061 2.1E-06 41.3 16.7 111 8-133 161-272 (327)
265 3p5b_L Low density lipoprotein 97.1 0.075 2.6E-06 42.1 18.7 163 10-208 112-277 (400)
266 2fp8_A Strictosidine synthase; 97.1 0.064 2.2E-06 40.9 18.2 114 11-140 81-216 (322)
267 2xn4_A Kelch-like protein 2; s 97.0 0.03 1E-06 42.3 13.4 158 20-216 108-282 (302)
268 2p4o_A Hypothetical protein; p 96.9 0.081 2.8E-06 40.1 23.1 114 10-140 32-147 (306)
269 4hw6_A Hypothetical protein, I 96.9 0.13 4.4E-06 41.3 16.9 158 11-208 140-304 (433)
270 2xbg_A YCF48-like protein; pho 96.9 0.1 3.5E-06 40.0 18.2 110 9-136 121-230 (327)
271 3m0c_C LDL receptor, low-densi 96.8 0.2 6.9E-06 43.4 18.9 118 10-139 424-545 (791)
272 2vpj_A Kelch-like protein 12; 96.8 0.09 3.1E-06 39.6 15.2 162 20-217 62-238 (301)
273 2ad6_A Methanol dehydrogenase 96.8 0.081 2.8E-06 44.1 15.5 25 186-215 477-501 (571)
274 1k3i_A Galactose oxidase precu 96.8 0.014 4.8E-07 49.5 11.1 114 14-140 190-323 (656)
275 3ii7_A Kelch-like protein 7; p 96.8 0.052 1.8E-06 41.0 13.4 105 20-140 55-178 (306)
276 3qqz_A Putative uncharacterize 96.8 0.1 3.5E-06 38.6 20.5 170 11-205 71-250 (255)
277 2xe4_A Oligopeptidase B; hydro 96.7 0.11 3.7E-06 44.8 16.4 73 13-89 224-304 (751)
278 2xn4_A Kelch-like protein 2; s 96.7 0.1 3.6E-06 39.3 14.6 159 20-217 61-236 (302)
279 1ijq_A LDL receptor, low-densi 96.7 0.14 4.7E-06 39.1 18.4 173 23-240 3-177 (316)
280 3sov_A LRP-6, low-density lipo 96.6 0.16 5.3E-06 38.9 16.5 159 11-208 36-197 (318)
281 1flg_A Protein (quinoprotein e 96.5 0.098 3.4E-06 43.7 14.5 25 186-215 499-523 (582)
282 2ad6_A Methanol dehydrogenase 96.5 0.067 2.3E-06 44.6 13.3 61 79-155 443-503 (571)
283 1w6s_A Methanol dehydrogenase 96.5 0.19 6.4E-06 42.2 15.9 69 14-90 245-343 (599)
284 1flg_A Protein (quinoprotein e 96.4 0.093 3.2E-06 43.8 13.7 61 79-155 465-525 (582)
285 1kv9_A Type II quinohemoprotei 96.4 0.14 4.8E-06 43.6 15.0 61 79-155 437-497 (668)
286 4a2l_A BT_4663, two-component 96.4 0.41 1.4E-05 41.5 22.0 187 10-238 357-554 (795)
287 3pbp_A Nucleoporin NUP82; beta 96.4 0.12 4.1E-06 41.1 13.1 121 11-135 67-207 (452)
288 3pbp_A Nucleoporin NUP82; beta 96.3 0.31 1E-05 38.9 17.1 115 19-141 30-159 (452)
289 4asc_A Kelch repeat and BTB do 96.3 0.23 8E-06 37.6 14.3 109 16-140 41-174 (315)
290 1zgk_A Kelch-like ECH-associat 96.3 0.07 2.4E-06 40.4 11.3 159 20-217 70-247 (308)
291 2woz_A Kelch repeat and BTB do 96.2 0.2 7E-06 38.0 13.8 108 17-140 53-184 (318)
292 1cru_A Protein (soluble quinop 96.2 0.36 1.2E-05 38.9 17.8 114 11-129 28-163 (454)
293 1k3i_A Galactose oxidase precu 96.2 0.077 2.6E-06 45.0 12.1 120 61-209 190-324 (656)
294 4asc_A Kelch repeat and BTB do 96.2 0.28 9.7E-06 37.1 15.1 112 20-151 98-228 (315)
295 3tc9_A Hypothetical hydrolase; 96.0 0.11 3.9E-06 41.5 11.8 114 10-139 179-300 (430)
296 4hw6_A Hypothetical protein, I 95.9 0.49 1.7E-05 37.9 16.4 116 12-138 230-372 (433)
297 1n7d_A LDL receptor, low-densi 95.9 0.016 5.5E-07 49.5 6.5 162 11-208 407-571 (699)
298 1tl2_A L10, protein (tachylect 95.9 0.16 5.4E-06 36.7 10.5 109 11-133 42-156 (236)
299 3kya_A Putative phosphatase; s 95.9 0.58 2E-05 38.2 19.2 115 11-139 140-277 (496)
300 2uvk_A YJHT; unknown function, 95.8 0.46 1.6E-05 36.6 14.1 88 31-129 168-261 (357)
301 2woz_A Kelch repeat and BTB do 95.7 0.26 9E-06 37.4 12.4 112 20-151 109-238 (318)
302 2p9w_A MAL S 1 allergenic prot 95.6 0.24 8.1E-06 38.1 11.4 117 12-140 65-215 (334)
303 3sre_A PON1, serum paraoxonase 95.6 0.57 2E-05 36.4 24.2 165 11-208 51-252 (355)
304 2g8s_A Glucose/sorbosone dehyd 95.6 0.31 1.1E-05 37.8 12.5 113 11-128 19-148 (353)
305 1w6s_A Methanol dehydrogenase 95.4 0.41 1.4E-05 40.1 13.3 29 120-154 483-511 (599)
306 3sov_A LRP-6, low-density lipo 95.4 0.65 2.2E-05 35.4 16.7 113 11-140 80-197 (318)
307 3m0c_C LDL receptor, low-densi 95.3 1.3 4.4E-05 38.5 19.0 114 11-140 472-589 (791)
308 4a2l_A BT_4663, two-component 95.3 1.3 4.4E-05 38.4 22.6 112 10-140 406-526 (795)
309 3p5b_L Low density lipoprotein 94.8 1.2 4.1E-05 35.2 20.4 114 11-140 160-277 (400)
310 3amr_A 3-phytase; beta-propell 94.7 1.1 3.9E-05 34.7 20.8 149 15-193 31-200 (355)
311 2zwa_A Leucine carboxyl methyl 94.7 0.84 2.9E-05 39.0 13.3 109 20-141 451-578 (695)
312 2ism_A Putative oxidoreductase 94.5 1.3 4.4E-05 34.3 17.4 72 57-140 31-114 (352)
313 2uvk_A YJHT; unknown function, 94.4 1.3 4.4E-05 34.1 14.4 97 20-130 19-128 (357)
314 1n7d_A LDL receptor, low-densi 94.3 0.12 4.1E-06 44.2 7.3 112 12-140 455-571 (699)
315 3kya_A Putative phosphatase; s 94.2 1.9 6.4E-05 35.2 16.2 146 59-239 141-322 (496)
316 3v9f_A Two-component system se 94.2 2.4 8.4E-05 36.5 20.5 110 10-140 363-478 (781)
317 2zwa_A Leucine carboxyl methyl 94.0 1.8 6.1E-05 37.0 13.9 163 19-210 396-579 (695)
318 3a9g_A Putative uncharacterize 94.0 1.7 5.8E-05 33.7 14.9 110 11-128 30-153 (354)
319 3s94_A LRP-6, low-density lipo 93.9 2.6 8.7E-05 35.5 18.6 160 10-209 40-203 (619)
320 2ism_A Putative oxidoreductase 93.3 2.2 7.6E-05 32.9 15.7 107 11-127 32-152 (352)
321 3amr_A 3-phytase; beta-propell 93.3 2.3 7.8E-05 33.0 18.6 156 30-207 98-262 (355)
322 3a9g_A Putative uncharacterize 93.1 2.4 8.3E-05 32.8 17.0 73 56-140 28-114 (354)
323 3sre_A PON1, serum paraoxonase 93.0 2.6 8.8E-05 32.8 17.6 105 59-180 52-177 (355)
324 3das_A Putative oxidoreductase 92.7 2.8 9.4E-05 32.5 13.4 114 10-128 32-158 (347)
325 4a0p_A LRP6, LRP-6, low-densit 92.1 4.9 0.00017 33.9 19.5 159 11-210 38-199 (628)
326 2wg3_C Hedgehog-interacting pr 91.0 5.3 0.00018 32.3 13.0 117 11-129 15-158 (463)
327 3s94_A LRP-6, low-density lipo 90.6 7 0.00024 32.9 17.2 158 11-209 350-511 (619)
328 3v9f_A Two-component system se 90.4 8 0.00027 33.3 22.9 184 9-238 312-506 (781)
329 3ei3_A DNA damage-binding prot 89.3 13 0.00044 34.0 20.3 146 21-209 844-1000(1158)
330 2g8s_A Glucose/sorbosone dehyd 89.2 3.2 0.00011 32.1 9.4 29 108-138 18-46 (353)
331 1cru_A Protein (soluble quinop 89.2 7.6 0.00026 31.2 16.4 54 57-117 27-86 (454)
332 3ei3_A DNA damage-binding prot 84.4 24 0.00084 32.2 24.3 77 8-89 552-636 (1158)
333 4gq2_M Nucleoporin NUP120; bet 83.9 16 0.00054 32.6 11.8 31 109-141 237-267 (950)
334 1tl2_A L10, protein (tachylect 81.7 13 0.00043 27.0 11.2 115 13-141 91-209 (236)
335 1xi4_A Clathrin heavy chain; a 80.9 24 0.00081 33.2 11.6 32 172-213 263-294 (1630)
336 3f7f_A Nucleoporin NUP120; nuc 80.7 14 0.00047 31.7 9.6 21 120-140 230-250 (729)
337 2be1_A Serine/threonine-protei 78.9 20 0.00069 27.6 9.5 63 22-90 11-77 (339)
338 4a0p_A LRP6, LRP-6, low-densit 78.5 29 0.001 29.2 19.9 103 11-126 341-449 (628)
339 2be1_A Serine/threonine-protei 76.4 7.8 0.00027 29.9 6.5 118 70-215 10-137 (339)
340 4gq2_M Nucleoporin NUP120; bet 71.0 8 0.00027 34.4 6.1 37 11-52 237-273 (950)
341 4fhn_B Nucleoporin NUP120; pro 70.1 15 0.00053 33.4 7.8 30 110-141 240-269 (1139)
342 3das_A Putative oxidoreductase 68.5 38 0.0013 26.1 16.2 85 48-139 23-115 (347)
343 3sbq_A Nitrous-oxide reductase 68.4 17 0.00057 30.4 6.9 78 108-208 323-408 (638)
344 2xzh_A Clathrin heavy chain 1; 66.1 44 0.0015 25.9 22.0 154 15-208 72-236 (365)
345 1xi4_A Clathrin heavy chain; a 65.8 93 0.0032 29.5 13.1 116 17-158 73-199 (1630)
346 3sbq_A Nitrous-oxide reductase 62.5 69 0.0024 26.9 10.4 78 59-141 325-409 (638)
347 4fhn_B Nucleoporin NUP120; pro 61.2 7.8 0.00027 35.3 4.2 37 11-52 239-275 (1139)
348 3f7f_A Nucleoporin NUP120; nuc 58.1 21 0.00071 30.7 5.9 36 11-53 223-258 (729)
349 2wg3_C Hedgehog-interacting pr 57.5 74 0.0025 25.6 13.0 29 57-87 14-43 (463)
350 1sqj_A OXG-RCBH, oligoxylogluc 54.8 1.1E+02 0.0036 26.6 15.4 131 9-151 14-159 (789)
351 2xzh_A Clathrin heavy chain 1; 54.5 73 0.0025 24.7 19.9 122 11-140 153-290 (365)
352 3zwu_A Alkaline phosphatase PH 53.1 78 0.0027 26.5 8.5 56 14-76 480-548 (592)
353 1sqj_A OXG-RCBH, oligoxylogluc 51.4 1.2E+02 0.0042 26.3 13.6 158 56-237 14-179 (789)
354 1bpo_A Protein (clathrin); cla 43.8 1.3E+02 0.0044 24.4 20.6 155 14-208 70-235 (494)
355 3b7f_A Glycosyl hydrolase, BNR 39.7 1.3E+02 0.0044 23.2 17.5 113 10-131 55-199 (394)
356 4a9v_A PHOX; hydrolase, beta-p 35.8 1.9E+02 0.0067 24.2 8.4 59 11-76 477-548 (592)
357 3s25_A Hypothetical 7-bladed b 34.4 1.4E+02 0.0049 22.2 12.2 101 15-138 109-212 (302)
358 2cn3_A Xyloglucanase, beta-1,4 34.3 2.2E+02 0.0076 24.4 16.7 131 11-151 24-171 (737)
359 3u12_A USP37 protein; structur 31.7 1.1E+02 0.0037 20.0 7.2 11 131-141 24-34 (141)
360 1bpo_A Protein (clathrin); cla 30.9 2.2E+02 0.0074 23.2 20.8 123 10-140 151-289 (494)
361 3zwu_A Alkaline phosphatase PH 23.5 2.9E+02 0.01 23.1 7.3 58 60-126 479-547 (592)
362 3kvp_A Uncharacterized protein 22.3 1.1E+02 0.0039 17.1 3.2 29 186-220 31-59 (72)
No 1
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.2e-34 Score=221.80 Aligned_cols=208 Identities=26% Similarity=0.421 Sum_probs=162.6
Q ss_pred CcchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 1 MDKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 1 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
|...+.+|.+.|++++|+|+|++||+|+.|++|+||++... ..+++..+.+|.++|.+++|+|+..+.+|++++.|+
T Consensus 1 ~~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~---~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 1 MVVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp -CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred CceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC---CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 44567889999999999999999999999999999999743 335677889999999999998743378999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
+|++||+..+ .+..+..+..|...|.+++|+|...+.+|++++.|++|++||++..... ....+..|...+
T Consensus 78 ~v~iWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~----~~~~~~~h~~~v 148 (297)
T 2pm7_B 78 KVMIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT----SPIIIDAHAIGV 148 (297)
T ss_dssp EEEEEEBSSS-----CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB----CCEEEECCSSCE
T ss_pred EEEEEEcCCC-----ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce----eeeeeecccCcc
Confidence 9999999754 1245566778889999999999333889999999999999999863111 123345565555
Q ss_pred eccccccceeeeEEEeCCCCC--------CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEE
Q 026295 161 TMFRKASCISASISWNPQKGE--------NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAV 232 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~--------~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v 232 (240)
. +++|+|+... ..+.+|++|+.| +.|+|||+++....+.....+. +|...|++|
T Consensus 149 ~----------~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-----~~v~lwd~~~~~~~~~~~~~l~---~H~~~V~~v 210 (297)
T 2pm7_B 149 N----------SASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLE---GHSDWVRDV 210 (297)
T ss_dssp E----------EEEECCCC------------CCEEEEEETT-----SCEEEEEEETTTTEEEEEEEEC---CCSSCEEEE
T ss_pred c----------eEeecCCcccccccCCCCCCcceEEEEcCC-----CcEEEEEEcCCCceEEEEEEec---CCCCceEEE
Confidence 5 8999997421 112389999999 9999999987665444444444 688899999
Q ss_pred EEecCC
Q 026295 233 AWALNI 238 (240)
Q Consensus 233 ~~sp~~ 238 (240)
+|+|++
T Consensus 211 ~~sp~~ 216 (297)
T 2pm7_B 211 AWSPTV 216 (297)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.2e-35 Score=228.25 Aligned_cols=187 Identities=15% Similarity=0.118 Sum_probs=155.9
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCC-CEEEEEecCCeEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFG-DAVACICSDGSLL 83 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~d~~v~ 83 (240)
+.+|.+.|++++|+|+|++|++|+.|++|+|||+. +.+++..+.+|...|.+++|+++ + .+|++++.|++|+
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-----~~~~~~~~~~h~~~V~~~~~~~~--~~~~l~s~s~D~~v~ 195 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-----QQVVLSSYRAHAAQVTCVAASPH--KDSVFLSCSEDNRIL 195 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEECSS--CTTEEEEEETTSCEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-----CCcEEEEEcCcCCceEEEEecCC--CCCceeeeccccccc
Confidence 34799999999999999999999999999999998 66889999999999999999998 6 5789999999999
Q ss_pred EEEeeeccCCCcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
+||++.+ ++...+. .+...+.+++|+|. ++.+|++|+.||+|++||+++ .+++..+..|...|.
T Consensus 196 iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~p~-~~~~l~sg~~dg~v~~wd~~~------~~~~~~~~~h~~~v~ 261 (344)
T 4gqb_B 196 LWDTRCP-------KPASQIGCSAPGYLPTSLAWHPQ-QSEVFVFGDENGTVSLVDTKS------TSCVLSSAVHSQCVT 261 (344)
T ss_dssp EEETTSS-------SCEEECC----CCCEEEEEECSS-CTTEEEEEETTSEEEEEESCC--------CCEEEECCSSCEE
T ss_pred ccccccc-------ceeeeeecceeeccceeeeecCC-CCcceEEeccCCcEEEEECCC------CcEEEEEcCCCCCEE
Confidence 9999876 5555553 34567899999883 456789999999999999987 567778888887777
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++.. +|++|+.| ++|+|||+.+++ . ..+ .+|.+.|++|+|+|++.
T Consensus 262 ----------~v~fsp~g~~----~lasgs~D-----~~i~vwd~~~~~----~-~~~---~~H~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 262 ----------GLVFSPHSVP----FLASLSED-----CSLAVLDSSLSE----L-FRS---QAHRDFVRDATWSPLNH 312 (344)
T ss_dssp ----------EEEECSSSSC----CEEEEETT-----SCEEEECTTCCE----E-EEE---CCCSSCEEEEEECSSST
T ss_pred ----------EEEEccCCCe----EEEEEeCC-----CeEEEEECCCCc----E-EEE---cCCCCCEEEEEEeCCCC
Confidence 9999998742 79999999 999999987643 1 222 36888999999999975
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=220.98 Aligned_cols=197 Identities=19% Similarity=0.363 Sum_probs=161.9
Q ss_pred chhccccc-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeE-eeecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 3 KAVATLDK-GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLK-TKVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 3 ~~~~~h~~-~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
+.+..|.+ .|.+++|+|+|++||+|+.|++|+||++... ....... ..+|...|.+++|+|+ +++|++++.|+
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~---~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s~D~ 83 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD---SWICKSVLSEGHQRTVRKVAWSPC--GNYLASASFDA 83 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT---EEEEEEEECSSCSSCEEEEEECTT--SSEEEEEETTS
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC---cceeeeeeccccCCcEEEEEECCC--CCEEEEEECCC
Confidence 45778887 8999999999999999999999999999743 2222222 3589999999999999 99999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
.|++|++.... +.++..+.+|...|.+++|+| ++.+|++++.|++|++||++... ...+...+..|...+
T Consensus 84 ~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 84 TTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVDEED---EYECVSVLNSHTQDV 153 (345)
T ss_dssp CEEEEEECCC------EEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECTTS---CEEEEEEECCCCSCE
T ss_pred cEEEEEccCCC-----eEEEEEccCCCCCceEEEEeC--CCCEEEEEECCCeEEEEECCCCC---CeEEEEEecCcCCCe
Confidence 99999987542 256788889999999999999 99999999999999999997631 234555666776666
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. +++|+|++. +|++|+.| +.|++|+..... +.....+. +|...|++++|+|++.
T Consensus 154 ~----------~~~~~p~~~-----~l~s~s~d-----~~i~~w~~~~~~--~~~~~~~~---~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 154 K----------HVVWHPSQE-----LLASASYD-----DTVKLYREEEDD--WVCCATLE---GHESTVWSLAFDPSGQ 207 (345)
T ss_dssp E----------EEEECSSSS-----CEEEEETT-----SCEEEEEEETTE--EEEEEEEC---CCSSCEEEEEECTTSS
T ss_pred E----------EEEECCCCC-----EEEEEeCC-----CcEEEEEecCCC--EEEEEEec---CCCCceEEEEECCCCC
Confidence 6 999999987 89999999 999999988653 22333333 6888999999999974
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-33 Score=218.40 Aligned_cols=190 Identities=13% Similarity=0.199 Sum_probs=163.6
Q ss_pred cchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 2 DKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 2 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+.+..|.+.|.+++|+|++++|++|+.||+|+|||+. +...+..+..|..+|.+++|+|+ +++|++++.|+.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-----~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~ 78 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-----TQVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFR 78 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----CCceeEEeeccCCcEEEEEEeCC--CCEEEEECCCCE
Confidence 45688999999999999999999999999999999998 56788889999999999999999 999999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
|++||+..+ +++..+.+|...|.+++|+| ++.+|++++.|++|++||+++. ..+...+..|...+.
T Consensus 79 i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~--~~~~l~sgs~D~~v~lWd~~~~-----~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 79 IRVFNYNTG-------EKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENN-----WALEQTFEGHEHFVM 144 (304)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEEGGGT-----TEEEEEECCCCSCEE
T ss_pred EEEEECCCC-------cEEEEEeCCCCcEEEEEEcC--CCCEEEEECCCCeEEEEECCCC-----cchhhhhcccCCcEE
Confidence 999999876 78889999999999999999 9999999999999999999863 355566777777776
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
+++|+|... .+|++|+.| +.|++||+......... ..+|...|..++|+|.
T Consensus 145 ----------~v~~~p~~~----~~l~sgs~D-----~~v~iwd~~~~~~~~~~------~~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 145 ----------CVAFNPKDP----STFASGCLD-----RTVKVWSLGQSTPNFTL------TTGQERGVNYVDYYPL 195 (304)
T ss_dssp ----------EEEECTTCT----TEEEEEETT-----SEEEEEETTCSSCSEEE------ECCCTTCEEEEEECCS
T ss_pred ----------EEEECCCCC----CEEEEEeCC-----CeEEEEECCCCCcccee------ccCCcCcEEEEEEEEc
Confidence 999999542 189999999 99999999765433222 1246668999999884
No 5
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=213.48 Aligned_cols=197 Identities=23% Similarity=0.444 Sum_probs=163.1
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
.+|.+.|.+++|+|++++|++|+.|++|+||++... ..+++..+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~---~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD---DFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVW 132 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC----EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC---CeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEE
Confidence 569999999999999999999999999999998743 45678889999999999999999 9999999999999999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
|+.... ...++..+..|...|.+++|+| ++.+|++++.|++|++||.+.. .+.+...+..|...|.
T Consensus 133 d~~~~~----~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~i~~w~~~~~----~~~~~~~~~~h~~~v~---- 198 (345)
T 3fm0_A 133 EVDEED----EYECVSVLNSHTQDVKHVVWHP--SQELLASASYDDTVKLYREEED----DWVCCATLEGHESTVW---- 198 (345)
T ss_dssp EECTTS----CEEEEEEECCCCSCEEEEEECS--SSSCEEEEETTSCEEEEEEETT----EEEEEEEECCCSSCEE----
T ss_pred ECCCCC----CeEEEEEecCcCCCeEEEEECC--CCCEEEEEeCCCcEEEEEecCC----CEEEEEEecCCCCceE----
Confidence 997642 2356777888999999999999 9999999999999999999762 2345566777777776
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCC-----------cceeEeeecCCCCCCceEEEEE
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNR-----------WLPVAELALPEDRSDEVYAVAW 234 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~-----------~~~~~~~~~~~~h~~~v~~v~~ 234 (240)
+++|+|++. +|++|+.| +.|+||+....... +.....+. ..|...|++++|
T Consensus 199 ------~l~~sp~g~-----~l~s~s~D-----~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~ 260 (345)
T 3fm0_A 199 ------SLAFDPSGQ-----RLASCSDD-----RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS--GFHSRTIYDIAW 260 (345)
T ss_dssp ------EEEECTTSS-----EEEEEETT-----SCEEEEEEECTTCTTCCCCC---CEEEEEEEEC--SSCSSCEEEEEE
T ss_pred ------EEEECCCCC-----EEEEEeCC-----CeEEEeccccCCCCccceeeccCCccceeEEec--CCCCCcEEEEEE
Confidence 999999987 89999999 99999998543221 11222222 237889999999
Q ss_pred ecCCC
Q 026295 235 ALNIG 239 (240)
Q Consensus 235 sp~~~ 239 (240)
+|+++
T Consensus 261 ~~~~~ 265 (345)
T 3fm0_A 261 CQLTG 265 (345)
T ss_dssp CTTTC
T ss_pred ecCCC
Confidence 99875
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6e-33 Score=222.94 Aligned_cols=186 Identities=17% Similarity=0.212 Sum_probs=164.8
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|.+.|++++|+|++++|++|+.|++|+|||+. +.+....+.+|...|.+++|+|+ +.+|++++.|++|+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~-----~~~~~~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE-----TGDFERTLKGHTDSVQDISFDHS--GKLLASCSADMTIK 175 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT-----TCCCCEEECCCSSCEEEEEECTT--SSEEEEEETTSCCC
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----CCcEEEEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEE
Confidence 366899999999999999999999999999999998 55677888999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||+... +++..+.+|...|.+++|+| ++.+|++++.|++|++||+++ ..+...+..|...+.
T Consensus 176 iwd~~~~-------~~~~~~~~h~~~V~~v~~~p--~~~~l~s~s~D~~i~~wd~~~------~~~~~~~~~h~~~v~-- 238 (410)
T 1vyh_C 176 LWDFQGF-------ECIRTMHGHDHNVSSVSIMP--NGDHIVSASRDKTIKMWEVQT------GYCVKTFTGHREWVR-- 238 (410)
T ss_dssp EEETTSS-------CEEECCCCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTT------CCEEEEEECCSSCEE--
T ss_pred EEeCCCC-------ceeEEEcCCCCCEEEEEEeC--CCCEEEEEeCCCeEEEEECCC------CcEEEEEeCCCccEE--
Confidence 9999765 78889999999999999999 999999999999999999987 566777888877776
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
++.|+|++. +|++|+.| +.|++||+.+... ...+. +|...|++++|+|+.
T Consensus 239 --------~~~~~~~g~-----~l~s~s~D-----~~v~vwd~~~~~~----~~~~~---~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 239 --------MVRPNQDGT-----LIASCSND-----QTVRVWVVATKEC----KAELR---EHRHVVECISWAPES 288 (410)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----SCEEEEETTTCCE----EEEEC---CCSSCEEEEEECCSC
T ss_pred --------EEEECCCCC-----EEEEEcCC-----CeEEEEECCCCce----eeEec---CCCceEEEEEEcCcc
Confidence 899999987 89999999 9999999977542 23333 577799999999974
No 7
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-32 Score=212.17 Aligned_cols=200 Identities=19% Similarity=0.289 Sum_probs=155.4
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe-ee-cCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT-KV-HAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
+.+.+|.+.|.+++|+++ +||+|+.|++|+||++... ....+..+ .+ |...|.+++|+|+ +.+|++++.|+
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~---~~~~~~~~~~~~h~~~v~~v~~sp~--~~~las~s~D~ 80 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD---DFTLIDVLDETAHKKAIRSVAWRPH--TSLLAAGSFDS 80 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS---CCEEEEEECTTCCCSCEEEEEECTT--SSEEEEEETTS
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC---CeEEEEEEecCCccCCEEEEEECCC--CCEEEEEeCCC
Confidence 457889999999999987 9999999999999999743 23455555 34 9999999999999 99999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
.|++|++.........+.++..+.+|...|.+++|+| ++.+|++++.|++|++||++... ...+++..+..|...+
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~g~~las~s~D~~v~iwd~~~~~--~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWETDESG--EEYECISVLQEHSQDV 156 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECT--TSCEEEEEETTSCEEEEECCTTC--CCCEEEEEECCCSSCE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC--CCCEEEEEeCCCEEEEEeccCCC--CCeEEEEEeccCCCce
Confidence 9999998542111122367778889999999999999 99999999999999999995321 1245666677777777
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
. +++|+|++. +|++|+.| +.|+||+..... +.....+. +|...|++++|+|+.
T Consensus 157 ~----------~v~~~p~~~-----~l~s~s~D-----~~i~iW~~~~~~--~~~~~~~~---~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 157 K----------HVIWHPSEA-----LLASSSYD-----DTVRIWKDYDDD--WECVAVLN---GHEGTVWSSDFDKTE 209 (330)
T ss_dssp E----------EEEECSSSS-----EEEEEETT-----SCEEEEEEETTE--EEEEEEEC---CCSSCEEEEEECCSS
T ss_pred E----------EEEECCCCC-----EEEEEcCC-----CeEEEEECCCCC--eeEEEEcc---CCCCcEEEEEecCCC
Confidence 6 999999987 89999999 999999987642 22333333 688899999999983
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-32 Score=212.96 Aligned_cols=197 Identities=15% Similarity=0.166 Sum_probs=163.1
Q ss_pred chhcccccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 3 KAVATLDKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
..+.+|.+.|++++|+|++ ++|++|+.|++|++|++.........++..+.+|...|.+++|+|+ +.+|++++.|++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s~D~~ 88 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSASWDKT 88 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEeCCCE
Confidence 4578999999999999965 8999999999999999863322234567889999999999999999 999999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
|++||+..+ +++..+.+|...|.+++|+| ++.+|++++.|++|++||++. .....+..|...+.
T Consensus 89 v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~vwd~~~-------~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 89 LRLWDVATG-------ETYQRFVGHKSDVMSVDIDK--KASMIISGSRDKTIKVWTIKG-------QCLATLLGHNDWVS 152 (319)
T ss_dssp EEEEETTTT-------EEEEEEECCSSCEEEEEECT--TSCEEEEEETTSCEEEEETTS-------CEEEEECCCSSCEE
T ss_pred EEEEECCCC-------CeeEEEccCCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCC-------CeEEEEeccCCcEE
Confidence 999999877 88899999999999999999 999999999999999999874 45566667776666
Q ss_pred ccccccceeeeEEEeCCCCC-CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 162 MFRKASCISASISWNPQKGE-NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~-~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
++.|.|.... .+..+|++++.| +.|++||+.+.. ....+. +|...|++++|+|++.
T Consensus 153 ----------~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~----~~~~~~---~h~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 153 ----------QVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQ----IEADFI---GHNSNINTLTASPDGT 209 (319)
T ss_dssp ----------EEEECCC------CCEEEEEETT-----SCEEEEETTTTE----EEEEEC---CCCSCEEEEEECTTSS
T ss_pred ----------EEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcch----hheeec---CCCCcEEEEEEcCCCC
Confidence 8999986431 123479999998 999999987643 233333 6888999999999974
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-32 Score=213.52 Aligned_cols=187 Identities=16% Similarity=0.207 Sum_probs=161.0
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|...|.+++|+|++++|++|+.|++|+|||+. +.+.+..+.+|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA-----TGETYQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIK 132 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEECTT--SCEEEEEETTSCEE
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC-----CCCeeEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEE
Confidence 467899999999999999999999999999999998 66788899999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC----CCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccce
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS----TSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
+||++. .++..+.+|...|.++.|+|.. ++..+++++.|+.|++||+++ .+....+..|...
T Consensus 133 vwd~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~------~~~~~~~~~h~~~ 198 (319)
T 3frx_A 133 VWTIKG--------QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ------FQIEADFIGHNSN 198 (319)
T ss_dssp EEETTS--------CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT------TEEEEEECCCCSC
T ss_pred EEECCC--------CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc------chhheeecCCCCc
Confidence 999964 6778888999999999998831 244799999999999999987 5666777777777
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+. +++|+|++. +|++|+.| +.|+|||+.+.. ....+. +...|.+++|+|++.
T Consensus 199 v~----------~~~~sp~g~-----~l~s~~~d-----g~i~iwd~~~~~----~~~~~~----~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 199 IN----------TLTASPDGT-----LIASAGKD-----GEIMLWNLAAKK----AMYTLS----AQDEVFSLAFSPNRY 250 (319)
T ss_dssp EE----------EEEECTTSS-----EEEEEETT-----CEEEEEETTTTE----EEEEEE----CCSCEEEEEECSSSS
T ss_pred EE----------EEEEcCCCC-----EEEEEeCC-----CeEEEEECCCCc----EEEEec----CCCcEEEEEEcCCCC
Confidence 76 999999987 89999999 999999998754 233333 334899999999873
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=214.78 Aligned_cols=186 Identities=23% Similarity=0.336 Sum_probs=163.1
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|...+.+++|+|++++|++|+.|+.|++|++. ..+....+..|...|.+++|+|+ +++|++++.|+.|++
T Consensus 118 ~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~-----~~~~~~~~~~~~~~v~~~~~spd--g~~lasg~~dg~i~i 190 (321)
T 3ow8_A 118 IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE-----SGKKEYSLDTRGKFILSIAYSPD--GKYLASGAIDGIINI 190 (321)
T ss_dssp EECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT-----TCSEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEE
T ss_pred EeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC-----CCceeEEecCCCceEEEEEECCC--CCEEEEEcCCCeEEE
Confidence 55677789999999999999999999999999998 44566778888899999999999 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
||++.+ +++..+.+|...|.+++|+| ++.+|++++.|++|++||++. ..+...+..|...+.
T Consensus 191 wd~~~~-------~~~~~~~~h~~~v~~l~~sp--d~~~l~s~s~dg~i~iwd~~~------~~~~~~~~~h~~~v~--- 252 (321)
T 3ow8_A 191 FDIATG-------KLLHTLEGHAMPIRSLTFSP--DSQLLVTASDDGYIKIYDVQH------ANLAGTLSGHASWVL--- 252 (321)
T ss_dssp EETTTT-------EEEEEECCCSSCCCEEEECT--TSCEEEEECTTSCEEEEETTT------CCEEEEECCCSSCEE---
T ss_pred EECCCC-------cEEEEEcccCCceeEEEEcC--CCCEEEEEcCCCeEEEEECCC------cceeEEEcCCCCceE---
Confidence 999876 88889999999999999999 999999999999999999987 566677777877776
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++|+.| +.|+|||+.+.. ....+. +|...|++++|+|++.
T Consensus 253 -------~~~~sp~~~-----~l~s~s~D-----~~v~iwd~~~~~----~~~~~~---~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 253 -------NVAFCPDDT-----HFVSSSSD-----KSVKVWDVGTRT----CVHTFF---DHQDQVWGVKYNGNGS 303 (321)
T ss_dssp -------EEEECTTSS-----EEEEEETT-----SCEEEEETTTTE----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred -------EEEECCCCC-----EEEEEeCC-----CcEEEEeCCCCE----EEEEEc---CCCCcEEEEEECCCCC
Confidence 999999987 89999999 999999997653 333333 5778999999999874
No 11
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.5e-33 Score=215.83 Aligned_cols=205 Identities=24% Similarity=0.411 Sum_probs=154.6
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+... ...++..+.+|.+.|.+++|+|+..+.+|++++.|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~---~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG---GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT---EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC---CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 35689999999999999999999999999999999732 334677889999999999998642378999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||++.+ .+.....+.+|...|.+++|+|..++.+|++++.|++|++||++... .+.....+..|...+.
T Consensus 85 iWd~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~---~~~~~~~~~~h~~~v~-- 154 (316)
T 3bg1_A 85 IWREENG-----TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG---QWEVKKINNAHTIGCN-- 154 (316)
T ss_dssp EECCSSS-----CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS---CEEECCBTTSSSSCBC--
T ss_pred EEECCCC-----cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC---CcceeeeeccccCCcc--
Confidence 9999754 23566778889999999999994338899999999999999998631 1222333445554444
Q ss_pred ccccceeeeEEEeCCCCC------------CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEE
Q 026295 164 RKASCISASISWNPQKGE------------NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYA 231 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~------------~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~ 231 (240)
+++|+|+... ....+|++|+.| +.|+|||+.... .+..... ..+|..+|++
T Consensus 155 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~---l~~h~~~V~~ 217 (316)
T 3bg1_A 155 --------AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDG-QWKEEQK---LEAHSDWVRD 217 (316)
T ss_dssp --------CCEECCCCCC------CCSCCCCCCCBEECCBTT-----SBCCEEEECTTS-CEEEEEC---CBCCSSCEEE
T ss_pred --------eEEEccccCCccccccccccCccccceEEEecCC-----CeEEEEEeCCCC-ccceeee---cccCCCceEE
Confidence 8999997421 012389999999 999999996432 2223333 3468889999
Q ss_pred EEEecCC
Q 026295 232 VAWALNI 238 (240)
Q Consensus 232 v~~sp~~ 238 (240)
++|+|++
T Consensus 218 v~~sp~~ 224 (316)
T 3bg1_A 218 VAWAPSI 224 (316)
T ss_dssp EECCCCS
T ss_pred EEecCCC
Confidence 9999986
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-32 Score=212.35 Aligned_cols=187 Identities=13% Similarity=0.174 Sum_probs=165.2
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|...|.+++|++++.++++++.|++|+|||+. +.+.+..+..|...+.+++|+|+ +++|++++.|+.|+
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~-----~~~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-----NGKQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVN 147 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TTEEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-----CCCEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEE
Confidence 467899999999999999999999999999999998 56788888888999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+|++..+ +....+..+...|.+++|+| ++.+|++++.||.|++||+++ .+++..+..|...+.
T Consensus 148 i~~~~~~-------~~~~~~~~~~~~v~~~~~sp--dg~~lasg~~dg~i~iwd~~~------~~~~~~~~~h~~~v~-- 210 (321)
T 3ow8_A 148 IFGVESG-------KKEYSLDTRGKFILSIAYSP--DGKYLASGAIDGIINIFDIAT------GKLLHTLEGHAMPIR-- 210 (321)
T ss_dssp EEETTTC-------SEEEEEECSSSCEEEEEECT--TSSEEEEEETTSCEEEEETTT------TEEEEEECCCSSCCC--
T ss_pred EEEcCCC-------ceeEEecCCCceEEEEEECC--CCCEEEEEcCCCeEEEEECCC------CcEEEEEcccCCcee--
Confidence 9999776 67777888888999999999 999999999999999999987 577777877777776
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++|+.| +.|+|||+++.. ....+. +|...|++++|+|++.
T Consensus 211 --------~l~~spd~~-----~l~s~s~d-----g~i~iwd~~~~~----~~~~~~---~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 211 --------SLTFSPDSQ-----LLVTASDD-----GYIKIYDVQHAN----LAGTLS---GHASWVLNVAFCPDDT 261 (321)
T ss_dssp --------EEEECTTSC-----EEEEECTT-----SCEEEEETTTCC----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred --------EEEEcCCCC-----EEEEEcCC-----CeEEEEECCCcc----eeEEEc---CCCCceEEEEECCCCC
Confidence 999999987 89999999 999999987653 233333 6888999999999974
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.3e-32 Score=208.75 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=159.6
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|.+.|.+++|+|++++|++|+.|++|++||+... ..+...+.+|...|.+++|+|. .+.+|++++.|++|+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~----~~~~~~~~~h~~~v~~v~~~p~-~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPK-DPSTFASGCLDRTVK 166 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT----TEEEEEECCCCSCEEEEEECTT-CTTEEEEEETTSEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC----cchhhhhcccCCcEEEEEECCC-CCCEEEEEeCCCeEE
Confidence 46789999999999999999999999999999999732 2556778899999999999984 178999999999999
Q ss_pred EEEeeeccCCCcccEEEEEe-eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 84 LWEEIVEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
+||+... .+...+ ..+...+..+.|+|..++.+|++++.|++|++||+++ .+++..+..|...+.
T Consensus 167 iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~------~~~~~~~~~h~~~v~- 232 (304)
T 2ynn_A 167 VWSLGQS-------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT------KSCVATLEGHMSNVS- 232 (304)
T ss_dssp EEETTCS-------SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT------TEEEEEEECCSSCEE-
T ss_pred EEECCCC-------CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC------CccceeeCCCCCCEE-
Confidence 9999655 333333 3456789999998866788999999999999999987 577888888887777
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++|+.| +.|+|||..+.. ....+. .|...+++++|+|+++
T Consensus 233 ---------~~~~~p~~~-----~l~s~s~D-----g~i~iWd~~~~~----~~~~~~---~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 233 ---------FAVFHPTLP-----IIISGSED-----GTLKIWNSSTYK----VEKTLN---VGLERSWCIATHPTGR 283 (304)
T ss_dssp ---------EEEECSSSS-----EEEEEETT-----SCEEEEETTTCC----EEEEEC---CSSSSEEEEEECTTCG
T ss_pred ---------EEEECCCCC-----EEEEEcCC-----CeEEEEECCCCc----eeeecc---CCCccEEEEEECCCCC
Confidence 899999987 89999999 999999987654 333444 4666999999999874
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=207.81 Aligned_cols=200 Identities=23% Similarity=0.380 Sum_probs=155.7
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCC--CcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSS--SSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
|.+.|.+++|+|++++|++|+.|++|+||++..... ...+++..+.+|...|.+++|+|+ +++|++++.|++|++|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iw 134 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIW 134 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEE
Confidence 889999999999999999999999999999853210 134567788899999999999999 9999999999999999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
|+.... ..++++..+.+|...|.+++|+| ++.+|++++.|++|++||.... .++++..+..|...+.
T Consensus 135 d~~~~~---~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~D~~i~iW~~~~~----~~~~~~~~~~h~~~v~---- 201 (330)
T 2hes_X 135 ETDESG---EEYECISVLQEHSQDVKHVIWHP--SEALLASSSYDDTVRIWKDYDD----DWECVAVLNGHEGTVW---- 201 (330)
T ss_dssp ECCTTC---CCCEEEEEECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEEEETT----EEEEEEEECCCSSCEE----
T ss_pred eccCCC---CCeEEEEEeccCCCceEEEEECC--CCCEEEEEcCCCeEEEEECCCC----CeeEEEEccCCCCcEE----
Confidence 995321 22367788889999999999999 9999999999999999998752 2466777778877776
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCC----cceeEeeecCCCCCCceEEEEEecCC
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNR----WLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~----~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+++|+|+.. ..+|++|+.| ++|+||++...... +.....+ ...|...|++++|+|++
T Consensus 202 ------~~~~~~~~~---~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 202 ------SSDFDKTEG---VFRLCSGSDD-----STVRVWKYMGDDEDDQQEWVCEAIL--PDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp ------EEEECCSSS---SCEEEEEETT-----SCEEEEEEEEECTTSCEEEEEEEEC--CSCCSSCEEEEEECTTS
T ss_pred ------EEEecCCCC---eeEEEEEeCC-----CeEEEEEecCCCccccceeEEeeec--ccccccceEEEEEcCCC
Confidence 999999842 2279999999 99999999764321 1222222 22388899999999764
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.2e-32 Score=210.19 Aligned_cols=188 Identities=19% Similarity=0.260 Sum_probs=163.1
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|.+.|++++|+|++++|++|+.|+.|+||++. +.+....+.+|...|.+++|+|+ +++|++++.|+.|+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-----DGKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLK 90 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----TCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-----CcccchhhccCCCceEEEEEcCC--CCEEEEECCCCEEE
Confidence 467899999999999999999999999999999997 44667788899999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||+..+ +++..+..|...|.+++|+| ++.+|++++.|++|++||+++ .+....+..|...+.
T Consensus 91 vwd~~~~-------~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~iwd~~~------~~~~~~~~~~~~~v~-- 153 (312)
T 4ery_A 91 IWDVSSG-------KCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVS-- 153 (312)
T ss_dssp EEETTTC-------CEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTT------CCEEEEECCCSSCEE--
T ss_pred EEECCCC-------cEEEEEcCCCCCEEEEEEcC--CCCEEEEEeCCCcEEEEECCC------CEEEEEecCCCCcEE--
Confidence 9999776 78888999999999999999 999999999999999999987 466667777766666
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++++.| +.|++||+.+.... ..+ ...+...+..++|+|++.
T Consensus 154 --------~~~~~~~~~-----~l~~~~~d-----~~i~~wd~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~ 205 (312)
T 4ery_A 154 --------AVHFNRDGS-----LIVSSSYD-----GLCRIWDTASGQCL----KTL--IDDDNPPVSFVKFSPNGK 205 (312)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----SCEEEEETTTCCEE----EEE--CCSSCCCEEEEEECTTSS
T ss_pred --------EEEEcCCCC-----EEEEEeCC-----CcEEEEECCCCcee----eEE--eccCCCceEEEEECCCCC
Confidence 899999987 89999999 99999998765422 221 124566899999999874
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-32 Score=217.24 Aligned_cols=190 Identities=13% Similarity=0.163 Sum_probs=165.7
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+.+..|...|.+++|+|++++|++|+.|++|++||+. +..++..+.+|...|.++.|+|+ +.++++++.|+.|
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~-----~~~~~~~~~~h~~~v~~~~~~~~--g~~l~s~s~D~~v 258 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ-----TGYCVKTFTGHREWVRMVRPNQD--GTLIASCSNDQTV 258 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TCCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCE
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-----CCcEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCeE
Confidence 3467899999999999999999999999999999998 56788889999999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC------------------CCcEEEEEeCCCcEEEEEecCcccc
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS------------------TSLKLVAAYSDGHVKVYELLDPLIL 144 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------~~~~l~~~~~dg~v~iw~~~~~~~~ 144 (240)
++||+... .+...+..|...|.+++|+|.. .+.+|++++.|++|++||+++
T Consensus 259 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---- 327 (410)
T 1vyh_C 259 RVWVVATK-------ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---- 327 (410)
T ss_dssp EEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----
T ss_pred EEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC----
Confidence 99999776 7788888999999999999821 166899999999999999987
Q ss_pred cceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCC
Q 026295 145 KNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPED 224 (240)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~ 224 (240)
..+...+..|...+. +++|+|++. +|++|+.| +.|++||+.+.... ..+. +
T Consensus 328 --~~~~~~~~~h~~~v~----------~v~~~~~g~-----~l~s~s~D-----~~i~vwd~~~~~~~----~~~~---~ 378 (410)
T 1vyh_C 328 --GMCLMTLVGHDNWVR----------GVLFHSGGK-----FILSCADD-----KTLRVWDYKNKRCM----KTLN---A 378 (410)
T ss_dssp --TEEEEEEECCSSCEE----------EEEECSSSS-----CEEEEETT-----TEEEEECCTTSCCC----EEEE---C
T ss_pred --CceEEEEECCCCcEE----------EEEEcCCCC-----EEEEEeCC-----CeEEEEECCCCceE----EEEc---C
Confidence 577778888877777 999999987 89999998 99999999765433 3333 5
Q ss_pred CCCceEEEEEecCCC
Q 026295 225 RSDEVYAVAWALNIG 239 (240)
Q Consensus 225 h~~~v~~v~~sp~~~ 239 (240)
|...|++++|+|++.
T Consensus 379 h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 379 HEHFVTSLDFHKTAP 393 (410)
T ss_dssp CSSCEEEEEECSSSS
T ss_pred CCCcEEEEEEcCCCC
Confidence 777999999999874
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-31 Score=211.25 Aligned_cols=190 Identities=17% Similarity=0.247 Sum_probs=159.0
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|.+.|.+++|+|++++|++++.|++|++||+. +.+++..+.+|...|.++.|+|...+.+|++++.|+.|++
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~-----~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE-----SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC-----CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 55799999999999999999999999999999998 5678889999999999999988534789999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
||++.+ +++..+..|...|.+++|+| ++.+|++++.|++|++||++.. .....+..+.
T Consensus 225 wd~~~~-------~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~D~~v~lwd~~~~------~~~~~~~~~~------- 282 (354)
T 2pbi_B 225 WDMRSG-------QCVQAFETHESDVNSVRYYP--SGDAFASGSDDATCRLYDLRAD------REVAIYSKES------- 282 (354)
T ss_dssp EETTTC-------CEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTT------EEEEEECCTT-------
T ss_pred EECCCC-------cEEEEecCCCCCeEEEEEeC--CCCEEEEEeCCCeEEEEECCCC------cEEEEEcCCC-------
Confidence 999876 78888999999999999999 9999999999999999999873 3333332211
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
....+.+++|+|++. +|++|+.| +.|+|||+.++. ....+. +|...|++++|+||+.
T Consensus 283 -~~~~~~~~~~s~~g~-----~l~~g~~d-----~~i~vwd~~~~~----~~~~l~---~h~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 283 -IIFGASSVDFSLSGR-----LLFAGYND-----YTINVWDVLKGS----RVSILF---GHENRVSTLRVSPDGT 339 (354)
T ss_dssp -CCSCEEEEEECTTSS-----EEEEEETT-----SCEEEEETTTCS----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred -cccceeEEEEeCCCC-----EEEEEECC-----CcEEEEECCCCc----eEEEEE---CCCCcEEEEEECCCCC
Confidence 111234899999987 89999998 999999987654 223333 6888999999999974
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=210.10 Aligned_cols=187 Identities=14% Similarity=0.221 Sum_probs=149.1
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
|+..|.+++|+|++ +|++|+.||+|+|||+..... .......+.+|.+.|++++|+|+ +++|++++.|++|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~-~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENET-LIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSS-CEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCc-eeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEEC
Confidence 55689999999985 788999999999999974321 22233445689999999999999 999999999999999999
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCC-cEEEEEeCCCcEEEEEecCcccccceeEEeeeec--ccceeeccc
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTS-LKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN--AIDSVTMFR 164 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~v~~~~ 164 (240)
..+ +++..+.+|...|.+++|+| ++ .+|++++.|++|++||+++. +....+.. +...+
T Consensus 157 ~~~-------~~~~~~~~h~~~V~~~~~~~--~~~~~l~s~s~D~~v~iwd~~~~------~~~~~~~~~~~~~~~---- 217 (344)
T 4gqb_B 157 AQQ-------VVLSSYRAHAAQVTCVAASP--HKDSVFLSCSEDNRILLWDTRCP------KPASQIGCSAPGYLP---- 217 (344)
T ss_dssp TTT-------EEEEEECCCSSCEEEEEECS--SCTTEEEEEETTSCEEEEETTSS------SCEEECC----CCCE----
T ss_pred CCC-------cEEEEEcCcCCceEEEEecC--CCCCceeeecccccccccccccc------ceeeeeecceeeccc----
Confidence 877 89999999999999999998 66 46899999999999999873 44433322 22223
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.+++|+|.+.. +|++|+.| +.|+|||+++.+.. ..+. +|...|++|+|+|++.
T Consensus 218 ------~~~~~~p~~~~----~l~sg~~d-----g~v~~wd~~~~~~~----~~~~---~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 218 ------TSLAWHPQQSE----VFVFGDEN-----GTVSLVDTKSTSCV----LSSA---VHSQCVTGLVFSPHSV 270 (344)
T ss_dssp ------EEEEECSSCTT----EEEEEETT-----SEEEEEESCC--CC----EEEE---CCSSCEEEEEECSSSS
T ss_pred ------eeeeecCCCCc----ceEEeccC-----CcEEEEECCCCcEE----EEEc---CCCCCEEEEEEccCCC
Confidence 38999997642 88999998 99999999876533 2334 5778999999999974
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-31 Score=206.02 Aligned_cols=207 Identities=19% Similarity=0.319 Sum_probs=159.5
Q ss_pred hhcccccceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 4 AVATLDKGTTSSSWNYC--GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+.+|.+.|.+++|+++ +++|++|+.|++|+|||+... ....+..+.+|...|.+++|+|+..+.+|++++.|+.
T Consensus 48 ~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC---ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 46789999999999864 899999999999999999743 2234556778999999999998634689999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC-----------CCcEEEEEeCCCcEEEEEecCcccccceeEE
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS-----------TSLKLVAAYSDGHVKVYELLDPLILKNWQLQ 150 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 150 (240)
|++||++.... .....+..|...|.+++|+|.. ++.+|++++.|++|++||++.... .+.+.
T Consensus 125 v~~wd~~~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~--~~~~~ 197 (297)
T 2pm7_B 125 VSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLE 197 (297)
T ss_dssp EEEEEBCSSSC-----BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT--EEEEE
T ss_pred EEEEEecCCCc-----eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc--eEEEE
Confidence 99999975421 1235567888999999999821 156899999999999999986321 13455
Q ss_pred eeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
..+..|...|. +++|+|++. .+.+|++++.| ++|+||+++.....+.. ..+ ...+|...|+
T Consensus 198 ~~l~~H~~~V~----------~v~~sp~~~--~~~~las~s~D-----~~v~iWd~~~~~~~~~~-~~~-~~~~~~~~v~ 258 (297)
T 2pm7_B 198 STLEGHSDWVR----------DVAWSPTVL--LRSYMASVSQD-----RTCIIWTQDNEQGPWKK-TLL-KEEKFPDVLW 258 (297)
T ss_dssp EEECCCSSCEE----------EEEECCCCS--SSEEEEEEETT-----SCEEEEEESSTTSCCEE-EES-SSSCCSSCEE
T ss_pred EEecCCCCceE----------EEEECCCCC--CceEEEEEECC-----CcEEEEEeCCCCCccce-eee-ecccCCCcEE
Confidence 67777877777 999999851 12389999999 99999999875433322 111 1235778999
Q ss_pred EEEEecCCC
Q 026295 231 AVAWALNIG 239 (240)
Q Consensus 231 ~v~~sp~~~ 239 (240)
+++|+|++.
T Consensus 259 ~~~~s~~g~ 267 (297)
T 2pm7_B 259 RASWSLSGN 267 (297)
T ss_dssp EEEECSSSC
T ss_pred EEEECCCCC
Confidence 999999974
No 20
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.3e-31 Score=206.16 Aligned_cols=229 Identities=22% Similarity=0.429 Sum_probs=166.3
Q ss_pred cchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 2 DKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 2 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+-+.+|.+.|++++|+|++++|++|+.||.|+||++.... ...+....+.+|...|.+++|+|..++.+|++++.|+.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT-SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS-CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC-CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 34567899999999999999999999999999999997431 13467788889999999999999211899999999999
Q ss_pred EEEEEeeeccCC--CcccEEEEEeeeccccEEeEEEeecCC--CcEEEEEeCCCcEEEEEecCcccccceeEEeeeec--
Q 026295 82 LLLWEEIVEDAQ--PLQWKLCKSFESTSTQVLDVQFGVSST--SLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN-- 155 (240)
Q Consensus 82 v~iwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-- 155 (240)
|++||+..+... ...++++..+..|...|.+++|+| + +.+|++++.||.|++||+++......+........
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP--AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC--GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcC--CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 999999765321 234567888888999999999999 7 89999999999999999986543332221110000
Q ss_pred ---------------------------------------cc---ceeeccccccceeeeEEEeCCCCCCCCceEEEEecC
Q 026295 156 ---------------------------------------AI---DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNS 193 (240)
Q Consensus 156 ---------------------------------------~~---~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~d 193 (240)
.. ..+.....+...+.+++|+|++.. ...+|++|+.|
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~-~~~~l~s~~~d 239 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGR-WYQLIATGCKD 239 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSC-SSEEEEEEETT
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCC-cceEEEEEcCC
Confidence 00 001112223335569999999720 00289999999
Q ss_pred CCCCCCeEEEEEeecCCCCcc---------------------------------------eeEeeecCCCCCCceEEEEE
Q 026295 194 DTPQLNSSKVWEFDEAHNRWL---------------------------------------PVAELALPEDRSDEVYAVAW 234 (240)
Q Consensus 194 d~~~~~~i~iw~~~~~~~~~~---------------------------------------~~~~~~~~~~h~~~v~~v~~ 234 (240)
+.|++||+........ ....+....+|...|++++|
T Consensus 240 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 314 (351)
T 3f3f_A 240 -----GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW 314 (351)
T ss_dssp -----SCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEE
T ss_pred -----CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEE
Confidence 9999999987422110 11223334468889999999
Q ss_pred ecCCC
Q 026295 235 ALNIG 239 (240)
Q Consensus 235 sp~~~ 239 (240)
+|++.
T Consensus 315 s~~~~ 319 (351)
T 3f3f_A 315 NLTGT 319 (351)
T ss_dssp CSSSC
T ss_pred cCCCC
Confidence 99974
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-31 Score=208.27 Aligned_cols=191 Identities=17% Similarity=0.259 Sum_probs=163.3
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+.+.+|.+.|.+++|+|++++|++|+.||+|+|||+. +.+.+..+..|...|.+++|+|+ +.++++++.|+.|
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~-----~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v 121 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY-----TTNKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNIC 121 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-----TCCEEEEEECSSSCEEEEEECTT--SSEEEEEETTCEE
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-----CCCcceEeecCCccEEEEEECCC--CCEEEEEeCCCeE
Confidence 3477899999999999999999999999999999998 55677888899999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
++|++.... ........+.+|...|.++.|++ ++. +++++.|++|++||+++ .+....+..|...+.
T Consensus 122 ~iw~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~--~~~-l~s~s~d~~i~~wd~~~------~~~~~~~~~h~~~v~- 188 (340)
T 1got_B 122 SIYNLKTRE---GNVRVSRELAGHTGYLSCCRFLD--DNQ-IVTSSGDTTCALWDIET------GQQTTTFTGHTGDVM- 188 (340)
T ss_dssp EEEETTTCS---BSCEEEEEEECCSSCEEEEEEEE--TTE-EEEEETTSCEEEEETTT------TEEEEEECCCSSCEE-
T ss_pred EEEECccCC---CcceeEEEecCCCccEEEEEECC--CCc-EEEEECCCcEEEEECCC------CcEEEEEcCCCCceE-
Confidence 999986542 12256677888999999999998 766 89999999999999987 567777777877776
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++|+.| +.|++||++++. ....+. +|...|++++|+|++.
T Consensus 189 ---------~~~~~~~~~-----~l~sg~~d-----~~v~~wd~~~~~----~~~~~~---~h~~~v~~v~~~p~~~ 239 (340)
T 1got_B 189 ---------SLSLAPDTR-----LFVSGACD-----ASAKLWDVREGM----CRQTFT---GHESDINAICFFPNGN 239 (340)
T ss_dssp ---------EEEECTTSS-----EEEEEETT-----SCEEEEETTTCS----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred ---------EEEECCCCC-----EEEEEeCC-----CcEEEEECCCCe----eEEEEc---CCcCCEEEEEEcCCCC
Confidence 999999987 89999999 999999997654 223333 5777999999999874
No 22
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-31 Score=208.91 Aligned_cols=205 Identities=27% Similarity=0.427 Sum_probs=165.6
Q ss_pred cchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 2 DKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 2 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+.+.+|.+.|++++|+|++++|++|+.||.|+||++... +.+.+..+.+|...|.+++|+++..+.+|++++.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC---cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4568899999999999999999999999999999999743 5677888999999999999987644789999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCC--CcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccce
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSST--SLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
|++||+..+ .+..+..+..|...|.+++|+| + +.+|++++.|+.|++||++.... .....+..+...
T Consensus 81 v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~~~~~~~~ 149 (379)
T 3jrp_A 81 VLIWKEENG-----RWSQIAVHAVHSASVNSVQWAP--HEYGPLLLVASSDGKVSVVEFKENGT----TSPIIIDAHAIG 149 (379)
T ss_dssp EEEEEEETT-----EEEEEEEECCCSSCEEEEEECC--GGGCSEEEEEETTSEEEEEECCTTSC----CCEEEEECCTTC
T ss_pred EEEEEcCCC-----ceeEeeeecCCCcceEEEEeCC--CCCCCEEEEecCCCcEEEEecCCCCc----eeeEEecCCCCc
Confidence 999999875 1237777888999999999999 7 88999999999999999986321 222344556555
Q ss_pred eeccccccceeeeEEEeCCCCC--------CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEE
Q 026295 160 VTMFRKASCISASISWNPQKGE--------NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYA 231 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~--------~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~ 231 (240)
+. +++|+|.... .++.+|++++.| +.|++||+++....+.....+. +|...|++
T Consensus 150 v~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~---~h~~~v~~ 211 (379)
T 3jrp_A 150 VN----------SASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLE---GHSDWVRD 211 (379)
T ss_dssp EE----------EEEECCCC----------CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEEC---CCSSCEEE
T ss_pred eE----------EEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEe---cccCcEeE
Confidence 55 9999994100 012289999999 9999999998765555555554 57779999
Q ss_pred EEEecCC
Q 026295 232 VAWALNI 238 (240)
Q Consensus 232 v~~sp~~ 238 (240)
++|+|++
T Consensus 212 ~~~sp~~ 218 (379)
T 3jrp_A 212 VAWSPTV 218 (379)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999993
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3e-32 Score=215.09 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=152.5
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCC-CEEEEEecCCeEEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFG-DAVACICSDGSLLL 84 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~d~~v~i 84 (240)
.+|.+.|++++|+|++++|++|+.|+.|+|||+. +.+++..+.+|...|.+++|+++ + .++++++.|+.|++
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~-----~~~~~~~~~~h~~~v~~v~~s~~--~~~~~~s~~~dg~v~~ 208 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS-----QKAVLKSYNAHSSEVNCVAACPG--KDTIFLSCGEDGRILL 208 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEECTT--CSSCEEEEETTSCEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-----CCcEEEEEcCCCCCEEEEEEccC--CCceeeeeccCCceEE
Confidence 4688999999999999999999999999999998 66888899999999999999998 6 47899999999999
Q ss_pred EEeeeccCCCcccEEEEEe--eeccccEEeEEEeecCC-CcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 85 WEEIVEDAQPLQWKLCKSF--ESTSTQVLDVQFGVSST-SLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
||++.+ ++...+ ..+...+.+++|+| + +.+|++++.|+.|++||+++ .++...+..+...+.
T Consensus 209 wd~~~~-------~~~~~~~~~~~~~~v~~v~~sp--~~~~~la~g~~d~~i~~wd~~~------~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 209 WDTRKP-------KPATRIDFCASDTIPTSVTWHP--EKDDTFACGDETGNVSLVNIKN------PDSAQTSAVHSQNIT 273 (357)
T ss_dssp CCTTSS-------SCBCBCCCTTCCSCEEEEEECT--TSTTEEEEEESSSCEEEEESSC------GGGCEEECCCSSCEE
T ss_pred EECCCC-------ceeeeeeeccccccccchhhhh--cccceEEEeecccceeEEECCC------CcEeEEEeccceeEE
Confidence 999765 333333 34567799999998 5 46789999999999999987 455566677777666
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
+++|+|++.. +|++|+.| ++|+|||+++++ ....+ +|.+.|++|+|+|.
T Consensus 274 ----------~l~~sp~~~~----~lasgs~D-----~~i~iwd~~~~~----~~~~~----~H~~~V~~vafsP~ 322 (357)
T 4g56_B 274 ----------GLAYSYHSSP----FLASISED-----CTVAVLDADFSE----VFRDL----SHRDFVTGVAWSPL 322 (357)
T ss_dssp ----------EEEECSSSSC----CEEEEETT-----SCEEEECTTSCE----EEEEC----CCSSCEEEEEECSS
T ss_pred ----------EEEEcCCCCC----EEEEEeCC-----CEEEEEECCCCc----EeEEC----CCCCCEEEEEEeCC
Confidence 9999998742 79999999 999999987653 22222 58889999999994
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-31 Score=208.24 Aligned_cols=188 Identities=15% Similarity=0.193 Sum_probs=157.9
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|.+.|.+++|++++. |++++.|++|++||+. +.+++..+.+|.+.|.+++|+|+ +.++++++.|+.|+
T Consensus 138 ~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~sg~~d~~v~ 209 (340)
T 1got_B 138 ELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIE-----TGQQTTTFTGHTGDVMSLSLAPD--TRLFVSGACDASAK 209 (340)
T ss_dssp EEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEE
T ss_pred EecCCCccEEEEEECCCCc-EEEEECCCcEEEEECC-----CCcEEEEEcCCCCceEEEEECCC--CCEEEEEeCCCcEE
Confidence 3567999999999998775 8899999999999998 56788889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||++.+ .+...+..|...|.+++|+| ++.+|++++.||+|++||++. .+....+....
T Consensus 210 ~wd~~~~-------~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~d~~v~iwd~~~------~~~~~~~~~~~------ 268 (340)
T 1got_B 210 LWDVREG-------MCRQTFTGHESDINAICFFP--NGNAFATGSDDATCRLFDLRA------DQELMTYSHDN------ 268 (340)
T ss_dssp EEETTTC-------SEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTT------TEEEEEECCTT------
T ss_pred EEECCCC-------eeEEEEcCCcCCEEEEEEcC--CCCEEEEEcCCCcEEEEECCC------CcEEEEEccCC------
Confidence 9999776 78888999999999999999 999999999999999999987 33333332111
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
..+.+.+++|+|++. +|++|+.| +.|++||+.+.. ....+. +|..+|++++|+||+.
T Consensus 269 --~~~~v~~~~~s~~g~-----~l~~g~~d-----~~i~vwd~~~~~----~~~~~~---~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 269 --IICGITSVSFSKSGR-----LLLAGYDD-----FNCNVWDALKAD----RAGVLA---GHDNRVSCLGVTDDGM 325 (340)
T ss_dssp --CCSCEEEEEECTTSS-----EEEEEETT-----SEEEEEETTTCC----EEEEEE---CCSSCEEEEEECTTSS
T ss_pred --cccceEEEEECCCCC-----EEEEECCC-----CeEEEEEcccCc----EeeEee---cCCCcEEEEEEcCCCC
Confidence 122344899999987 89999998 999999987643 233344 5778999999999974
No 25
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-31 Score=209.12 Aligned_cols=197 Identities=17% Similarity=0.280 Sum_probs=159.4
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCC-----------------------------c--------
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSS-----------------------------S-------- 45 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-----------------------------~-------- 45 (240)
+.+.+|.+.|++++|+|++++|++|+.|++|+|||....... .
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 347789999999999999999999999999999997532100 0
Q ss_pred ------EEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC
Q 026295 46 ------FTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS 119 (240)
Q Consensus 46 ------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (240)
......+..|...|.++.|+|+ +..|++++.|++|++||+..+ +++..+.+|...|.+++|+|..
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNS--DMQILTASGDGTCALWDVESG-------QLLQSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECCCS
T ss_pred cccccccccceeeeccCCcEEEEEEeCC--CCEEEEEeCCCcEEEEeCCCC-------eEEEEEcCCCCCeEEEEEEeCC
Confidence 0011234568888999999998 889999999999999999776 7888999999999999998865
Q ss_pred CCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC
Q 026295 120 TSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN 199 (240)
Q Consensus 120 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~ 199 (240)
++.+|++++.||+|++||+++ .++...+..|...+. +++|+|++. +|++|+.| +
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~------~~~~~~~~~h~~~v~----------~v~~~p~~~-----~l~s~s~D-----~ 262 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDVN----------SVRYYPSGD-----AFASGSDD-----A 262 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTT------CCEEEEECCCSSCEE----------EEEECTTSS-----EEEEEETT-----S
T ss_pred CCCEEEEEeCCCeEEEEECCC------CcEEEEecCCCCCeE----------EEEEeCCCC-----EEEEEeCC-----C
Confidence 678999999999999999987 566777777777776 999999987 89999999 9
Q ss_pred eEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 200 SSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 200 ~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.|++||++.... ...+. ...+...+++++|+|++.
T Consensus 263 ~v~lwd~~~~~~----~~~~~-~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 263 TCRLYDLRADRE----VAIYS-KESIIFGASSVDFSLSGR 297 (354)
T ss_dssp CEEEEETTTTEE----EEEEC-CTTCCSCEEEEEECTTSS
T ss_pred eEEEEECCCCcE----EEEEc-CCCcccceeEEEEeCCCC
Confidence 999999876432 12222 223445799999999874
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-30 Score=203.89 Aligned_cols=196 Identities=16% Similarity=0.132 Sum_probs=157.1
Q ss_pred chhcccccceEEEEE-----CC-CCCEEEEEeCCCcEEEEeCCCCCCC--cEEEEeEeeecCccEEEEEEcCCCCCCEEE
Q 026295 3 KAVATLDKGTTSSSW-----NY-CGQRLATGSTDGTLSIFDSPDPSSS--SFTCNLKTKVHAGAILKVVWVPPEFGDAVA 74 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~-----s~-~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 74 (240)
..+.+|.+.|++++| ++ ++++|++|+.|++|+|||+...... ...+...+.+|...|.+++|+|+ +.+++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~--~~~l~ 92 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE--NCFAI 92 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--TTEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--CCEEE
Confidence 357889999999999 76 8999999999999999998643211 24567788899999999999999 99999
Q ss_pred EEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-
Q 026295 75 CICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF- 153 (240)
Q Consensus 75 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~- 153 (240)
+++.|++|++||++.+ +.+..+.+|...|.+++|+| ++.+|++++.|++|++||+.. .....+
T Consensus 93 s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp--~~~~l~s~~~d~~i~~wd~~~-------~~~~~~~ 156 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSP--DNRQILSAGAEREIKLWNILG-------ECKFSSA 156 (343)
T ss_dssp EEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECS--STTEEEEEETTSCEEEEESSS-------CEEEECC
T ss_pred EEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECC--CCCEEEEEcCCCEEEEEeccC-------Cceeeee
Confidence 9999999999999876 78888999999999999999 999999999999999999874 111111
Q ss_pred --ecccceeeccccccceeeeEEEeCCCCC-----CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCC
Q 026295 154 --QNAIDSVTMFRKASCISASISWNPQKGE-----NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRS 226 (240)
Q Consensus 154 --~~~~~~v~~~~~~~~~~~~v~~~p~~~~-----~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~ 226 (240)
..|...+. +++|+|.+.. +...+|++++.| +.|++||... .....+. +|.
T Consensus 157 ~~~~~~~~v~----------~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~-----~~~~~~~---~h~ 213 (343)
T 2xzm_R 157 EKENHSDWVS----------CVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNF-----QIRYTFK---AHE 213 (343)
T ss_dssp TTTSCSSCEE----------EEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTT-----EEEEEEE---CCS
T ss_pred cccCCCceee----------eeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCC-----ceeEEEc---Ccc
Confidence 13444444 8999998631 112389999999 9999999321 2233333 577
Q ss_pred CceEEEEEecCCC
Q 026295 227 DEVYAVAWALNIG 239 (240)
Q Consensus 227 ~~v~~v~~sp~~~ 239 (240)
..|++++|+||+.
T Consensus 214 ~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 214 SNVNHLSISPNGK 226 (343)
T ss_dssp SCEEEEEECTTSS
T ss_pred ccceEEEECCCCC
Confidence 7999999999974
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.6e-31 Score=222.62 Aligned_cols=199 Identities=16% Similarity=0.194 Sum_probs=152.8
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcE-------------------------------------
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSF------------------------------------- 46 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~------------------------------------- 46 (240)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+........
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 4678999999999999999999999999999999853210000
Q ss_pred ----EEEeEeeecCccEEEEEEcCCCCCC-EEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCC
Q 026295 47 ----TCNLKTKVHAGAILKVVWVPPEFGD-AVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTS 121 (240)
Q Consensus 47 ----~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (240)
.....+.+|...|.+++|+|+ +. .|++++.|++|++||.... ++...+.+|...|.+++|+| ++
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~--~~~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~V~~v~fsp--dg 202 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPS--RPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNP--DG 202 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSS--SSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECT--TS
T ss_pred eeCCCCcceecCCCCCceEEEECCC--CCeEEEEEeCCCeEEEEECCCC-------eEeeeeccccCceEEEEECC--CC
Confidence 001123467777888888877 65 5889999999999997654 78888999999999999999 99
Q ss_pred cEEEEEeCCCcEEEEEecCcccccceeEEeeee-------cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCC
Q 026295 122 LKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQ-------NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSD 194 (240)
Q Consensus 122 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd 194 (240)
.+|++++.|++|++||+.+ .+....+. .|...+. +++|+|++. +|++++.|
T Consensus 203 ~~las~s~D~~i~lwd~~~------g~~~~~~~~~~~~~~~h~~~V~----------~v~~spdg~-----~l~s~s~D- 260 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVD------GTKTGVFEDDSLKNVAHSGSVF----------GLTWSPDGT-----KIASASAD- 260 (611)
T ss_dssp SEEEEEETTSCEEEEETTT------CCEEEECBCTTSSSCSSSSCEE----------EEEECTTSS-----EEEEEETT-
T ss_pred CEEEEEECCCcEEEEECCC------CcEeeeeccccccccccCCCEE----------EEEECCCCC-----EEEEEeCC-
Confidence 9999999999999999876 34444442 4555554 999999987 89999999
Q ss_pred CCCCCeEEEEEeecCCCCccee------------------------------------EeeecCCCCCCceEEEEEecCC
Q 026295 195 TPQLNSSKVWEFDEAHNRWLPV------------------------------------AELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 195 ~~~~~~i~iw~~~~~~~~~~~~------------------------------------~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
++|+|||+.+........ .......+|...|++++|+||+
T Consensus 261 ----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg 336 (611)
T 1nr0_A 261 ----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG 336 (611)
T ss_dssp ----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred ----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC
Confidence 999999987643211110 0111234688899999999987
Q ss_pred C
Q 026295 239 G 239 (240)
Q Consensus 239 ~ 239 (240)
.
T Consensus 337 ~ 337 (611)
T 1nr0_A 337 K 337 (611)
T ss_dssp S
T ss_pred C
Confidence 4
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-30 Score=203.90 Aligned_cols=184 Identities=16% Similarity=0.188 Sum_probs=152.7
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|...|.+++|+|++.+|++|+.|++|+|||+. +.+.+..+.+|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~-----~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR-----TGTTYKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIK 143 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT-----SSCEEEEEECCCSCEEEEEECSS--TTEEEEEETTSCEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----CCcEEEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEE
Confidence 367899999999999999999999999999999998 55678889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEee---eccccEEeEEEeecCCC----------cEEEEEeCCCcEEEEEecCcccccceeEE
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSSTS----------LKLVAAYSDGHVKVYELLDPLILKNWQLQ 150 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~----------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 150 (240)
+||+.. ....... .|...|.+++|+| ++ .+|++++.|++|++||.. .+..
T Consensus 144 ~wd~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-------~~~~ 206 (343)
T 2xzm_R 144 LWNILG--------ECKFSSAEKENHSDWVSCVRYSP--IMKSANKVQPFAPYFASVGWDGRLKVWNTN-------FQIR 206 (343)
T ss_dssp EEESSS--------CEEEECCTTTSCSSCEEEEEECC--CCCSCSCCCSSCCEEEEEETTSEEEEEETT-------TEEE
T ss_pred EEeccC--------CceeeeecccCCCceeeeeeecc--ccccccccCCCCCEEEEEcCCCEEEEEcCC-------Ccee
Confidence 999974 2333332 6778899999998 55 689999999999999943 3555
Q ss_pred eeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
..+..|...+. +++|+|++. +|++|+.| +.|+|||+....... ..+. +...|+
T Consensus 207 ~~~~~h~~~v~----------~~~~s~~g~-----~l~sgs~d-----g~v~iwd~~~~~~~~---~~~~----~~~~v~ 259 (343)
T 2xzm_R 207 YTFKAHESNVN----------HLSISPNGK-----YIATGGKD-----KKLLIWDILNLTYPQ---REFD----AGSTIN 259 (343)
T ss_dssp EEEECCSSCEE----------EEEECTTSS-----EEEEEETT-----CEEEEEESSCCSSCS---EEEE----CSSCEE
T ss_pred EEEcCccccce----------EEEECCCCC-----EEEEEcCC-----CeEEEEECCCCcccc---eeec----CCCcEE
Confidence 66777777666 999999987 89999999 999999985433221 1221 344799
Q ss_pred EEEEecCC
Q 026295 231 AVAWALNI 238 (240)
Q Consensus 231 ~v~~sp~~ 238 (240)
+++|+|++
T Consensus 260 ~v~~sp~~ 267 (343)
T 2xzm_R 260 QIAFNPKL 267 (343)
T ss_dssp EEEECSSS
T ss_pred EEEECCCC
Confidence 99999986
No 29
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.7e-32 Score=218.41 Aligned_cols=191 Identities=15% Similarity=0.170 Sum_probs=151.1
Q ss_pred hcccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 5 VATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
...|+..|+|++|+| ++++||+|+.||.|+|||+... .......+.+|.+.|++|+|+|. .+.+|++++.|++|+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~---~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK---DKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTR 190 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC---SCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC---CceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEE
Confidence 456888999999999 5679999999999999999743 23345566789999999999984 278999999999999
Q ss_pred EEEeeeccCCCcccEEEEEee---eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
+||++.. ....+. .+...+.+++|+| ++.+|++|+.||.|++||++. +.+..+..|...|
T Consensus 191 iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~g~~dg~i~~wd~~~-------~~~~~~~~h~~~v 253 (435)
T 4e54_B 191 LQDFKGN--------ILRVFASSDTINIWFCSLDVSA--SSRMVVTGDNVGNVILLNMDG-------KELWNLRMHKKKV 253 (435)
T ss_dssp EEETTSC--------EEEEEECCSSCSCCCCCEEEET--TTTEEEEECSSSBEEEEESSS-------CBCCCSBCCSSCE
T ss_pred EeeccCC--------ceeEEeccCCCCccEEEEEECC--CCCEEEEEeCCCcEeeeccCc-------ceeEEEecccceE
Confidence 9999753 223332 3345678899999 999999999999999999864 3445566676666
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. +++|+|++.. +|++|+.| +.|+|||+++....... ....+|...|++++|+||+.
T Consensus 254 ~----------~v~~~p~~~~----~~~s~s~d-----~~v~iwd~~~~~~~~~~----~~~~~h~~~v~~~~~spdg~ 309 (435)
T 4e54_B 254 T----------HVALNPCCDW----FLATASVD-----QTVKIWDLRQVRGKASF----LYSLPHRHPVNAACFSPDGA 309 (435)
T ss_dssp E----------EEEECTTCSS----EEEEEETT-----SBCCEEETTTCCSSSCC----SBCCBCSSCEEECCBCTTSS
T ss_pred E----------eeeecCCCce----EEEEecCc-----ceeeEEecccccccceE----EEeeeccccccceeECCCCC
Confidence 6 9999998753 78899998 99999999876543322 12235888999999999974
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=2.7e-31 Score=206.33 Aligned_cols=206 Identities=20% Similarity=0.388 Sum_probs=158.8
Q ss_pred hhcccccceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 4 AVATLDKGTTSSSWNY--CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+.+|.+.|.+++|++ ++++|++|+.|++|+|||+... ....+..+.+|...|.+++|+|+..+.+|++++.|+.
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~---~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG---TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS---CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC---cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 4678999999999986 4899999999999999999742 2345667789999999999999744789999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC---------------CCcEEEEEeCCCcEEEEEecCcccccc
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS---------------TSLKLVAAYSDGHVKVYELLDPLILKN 146 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------~~~~l~~~~~dg~v~iw~~~~~~~~~~ 146 (240)
|++||++.. ..|.....+..|...|.+++|+|.. .+.+|++++.|++|++||++.. ..
T Consensus 129 i~lwd~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~---~~ 201 (316)
T 3bg1_A 129 ISLLTYTGE----GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED---GQ 201 (316)
T ss_dssp EEEEEECSS----SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT---SC
T ss_pred EEEEecCCC----CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC---Cc
Confidence 999999754 1234455666788899999999821 1468999999999999999642 12
Q ss_pred eeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCC-CcceeEeeecCCCC
Q 026295 147 WQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHN-RWLPVAELALPEDR 225 (240)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~-~~~~~~~~~~~~~h 225 (240)
+.+...+..|...|. +++|+|++. .+..+|++|+.| ++|+||++.+... .+.. ..+. +|
T Consensus 202 ~~~~~~l~~h~~~V~----------~v~~sp~~~-~~~~~las~s~D-----~~v~iw~~~~~~~~~~~~-~~~~---~~ 261 (316)
T 3bg1_A 202 WKEEQKLEAHSDWVR----------DVAWAPSIG-LPTSTIASCSQD-----GRVFIWTCDDASSNTWSP-KLLH---KF 261 (316)
T ss_dssp EEEEECCBCCSSCEE----------EEECCCCSS-CSCCEEEEEETT-----CEEEEEECSSTTCCCCBC-CEEE---EC
T ss_pred cceeeecccCCCceE----------EEEecCCCC-CCCceEEEEcCC-----CeEEEEEccCccccchhh-hhhh---cC
Confidence 355667777877777 999999862 112389999999 9999999876321 1111 1222 36
Q ss_pred CCceEEEEEecCCC
Q 026295 226 SDEVYAVAWALNIG 239 (240)
Q Consensus 226 ~~~v~~v~~sp~~~ 239 (240)
...|++++|+|++.
T Consensus 262 ~~~v~~v~~sp~g~ 275 (316)
T 3bg1_A 262 NDVVWHVSWSITAN 275 (316)
T ss_dssp SSCEEEEEECTTTC
T ss_pred CCcEEEEEEcCCCC
Confidence 67999999999974
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=3.7e-31 Score=209.79 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=154.3
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
..+..|.+.|.+++|+|++++|++++.|+.|+|||+.... .......+..|...|.+++|+|+ +.+|++++.|+.|
T Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i 124 (377)
T 3dwl_C 49 RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG--TWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVI 124 (377)
T ss_dssp CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCE
T ss_pred EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC--ceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeE
Confidence 3467899999999999999999999999999999998321 12256667789999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccc------------cceeE
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLIL------------KNWQL 149 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~------------~~~~~ 149 (240)
++||++... .|.....+.. |...|.+++|+| ++.+|++++.|++|++||+...... ...++
T Consensus 125 ~iwd~~~~~----~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 198 (377)
T 3dwl_C 125 SVCYFEQEN----DWWVSKHLKRPLRSTILSLDWHP--NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTV 198 (377)
T ss_dssp EECCC---------CCCCEEECSSCCSCEEEEEECT--TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEE
T ss_pred EEEEECCcc----cceeeeEeecccCCCeEEEEEcC--CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhh
Confidence 999998751 1224667777 899999999999 9999999999999999999632110 11344
Q ss_pred EeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCce
Q 026295 150 QAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEV 229 (240)
Q Consensus 150 ~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v 229 (240)
...+ .|...+. +++|+|++. +|++++.| +.|++||+.+..........+. +|...|
T Consensus 199 ~~~~-~~~~~v~----------~~~~sp~~~-----~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~---~~~~~v 254 (377)
T 3dwl_C 199 CAEY-PSGGWVH----------AVGFSPSGN-----ALAYAGHD-----SSVTIAYPSAPEQPPRALITVK---LSQLPL 254 (377)
T ss_dssp EECC-CCSSSEE----------EEEECTTSS-----CEEEEETT-----TEEC-CEECSTTSCEEECCCEE---CSSSCE
T ss_pred hhcc-cCCceEE----------EEEECCCCC-----EEEEEeCC-----CcEEEEECCCCCCcceeeEeec---CCCCce
Confidence 4444 5555555 999999987 89999999 9999999998765322233333 577799
Q ss_pred EEEEEecCC
Q 026295 230 YAVAWALNI 238 (240)
Q Consensus 230 ~~v~~sp~~ 238 (240)
++++|+|++
T Consensus 255 ~~~~~s~~~ 263 (377)
T 3dwl_C 255 RSLLWANES 263 (377)
T ss_dssp EEEEEEETT
T ss_pred EEEEEcCCC
Confidence 999999986
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.8e-31 Score=212.39 Aligned_cols=197 Identities=14% Similarity=0.239 Sum_probs=156.3
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+.+.+|.+.|++++|+|++++|++|+.|++|+|||+. +.+....+..|...|.+++|+|+ +++|++++.|+.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~-----~~~~~~~~~~h~~~v~~~~~s~~--g~~las~~~d~~v 132 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL-----TSQKTHAIKLHCPWVMECAFAPN--GQSVACGGLDSAC 132 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT-----TTEEEEEEECCCTTCCCCEECTT--SSEEEECCSSSCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC-----CCccceEEecCCCCEEEEEECCC--CCEEEEeeCCCcE
Confidence 3478899999999999999999999999999999998 56788889999999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-----eccc
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-----QNAI 157 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-----~~~~ 157 (240)
++|++...............+.+|...|.++.|.|. .+..|++++.|++|++||+++ .+.+..+ ..|.
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~-~~~~l~s~s~D~~i~~wd~~~------~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPD-QETRLITGSGDQTCVLWDVTT------GQRISIFGSEFPSGHT 205 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS-SSSCEEEECTTSCEEEECTTT------CCEEEEECCCSSSSCC
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecC-CCCEEEEECCCCcEEEEEcCC------CcEEEEeecccCCCCc
Confidence 999987532211122334567789999999999883 244699999999999999987 3444433 2333
Q ss_pred ceeeccccccceeeeEEEeCC-CCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEec
Q 026295 158 DSVTMFRKASCISASISWNPQ-KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~-~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 236 (240)
..+. +++|+|. +. +|++|+.| +.|++||++..... ...+. +|...|++++|+|
T Consensus 206 ~~v~----------~~~~~~~~~~-----~l~sgs~D-----~~v~~wd~~~~~~~---~~~~~---~h~~~v~~v~~~p 259 (380)
T 3iz6_a 206 ADVL----------SLSINSLNAN-----MFISGSCD-----TTVRLWDLRITSRA---VRTYH---GHEGDINSVKFFP 259 (380)
T ss_dssp SCEE----------EEEECSSSCC-----EEEEEETT-----SCEEEEETTTTCCC---CEEEC---CCSSCCCEEEECT
T ss_pred cCeE----------EEEeecCCCC-----EEEEEECC-----CeEEEEECCCCCcc---eEEEC---CcCCCeEEEEEec
Confidence 3443 8899874 44 89999999 99999998754322 22233 5888999999999
Q ss_pred CCC
Q 026295 237 NIG 239 (240)
Q Consensus 237 ~~~ 239 (240)
++.
T Consensus 260 ~~~ 262 (380)
T 3iz6_a 260 DGQ 262 (380)
T ss_dssp TSS
T ss_pred CCC
Confidence 974
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1e-29 Score=196.73 Aligned_cols=122 Identities=21% Similarity=0.333 Sum_probs=112.9
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|...|.+++|+|++++|++|+.|+.|++||+. +.+++..+.+|...|.++.|+|+ +.+|++++.|+.|+
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~-----~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~ 132 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-----SGKCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVR 132 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEE
T ss_pred hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC-----CCcEEEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEE
Confidence 466799999999999999999999999999999998 55678889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
+||++.+ +++..+..|...|.+++|+| ++.+|++++.||.|++||+++.
T Consensus 133 iwd~~~~-------~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~ 181 (312)
T 4ery_A 133 IWDVKTG-------KCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASG 181 (312)
T ss_dssp EEETTTC-------CEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTC
T ss_pred EEECCCC-------EEEEEecCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEECCCC
Confidence 9999776 77888888999999999999 9999999999999999999863
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=6.6e-30 Score=214.92 Aligned_cols=197 Identities=15% Similarity=0.254 Sum_probs=157.3
Q ss_pred hhcccccceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 4 AVATLDKGTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
.+.+|.+.|++++|+|+++ +|++|+.|++|++||.. +.+++..+.+|...|.+++|+|+ +++|++++.|++|
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~-----~~~~~~~l~~H~~~V~~v~fspd--g~~las~s~D~~i 214 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP-----PFKFKSTFGEHTKFVHSVRYNPD--GSLFASTGGDGTI 214 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT-----TBEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCE
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC-----CCeEeeeeccccCceEEEEECCC--CCEEEEEECCCcE
Confidence 4678999999999999987 69999999999999987 66788899999999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEee-------eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFE-------STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
++||+..+ +++..+. +|...|.+++|+| ++.+|++++.|++|++||+++. ++...+..
T Consensus 215 ~lwd~~~g-------~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg~~l~s~s~D~~v~lWd~~~~------~~~~~~~~ 279 (611)
T 1nr0_A 215 VLYNGVDG-------TKTGVFEDDSLKNVAHSGSVFGLTWSP--DGTKIASASADKTIKIWNVATL------KVEKTIPV 279 (611)
T ss_dssp EEEETTTC-------CEEEECBCTTSSSCSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTT------EEEEEEEC
T ss_pred EEEECCCC-------cEeeeeccccccccccCCCEEEEEECC--CCCEEEEEeCCCeEEEEeCCCC------ceeeeecC
Confidence 99998765 6666663 6889999999999 9999999999999999999863 22222211
Q ss_pred cc---------------------------------ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEE
Q 026295 156 AI---------------------------------DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSK 202 (240)
Q Consensus 156 ~~---------------------------------~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~ 202 (240)
+. ........+...+.+++|+|++. +|++++.| +.|+
T Consensus 280 ~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-----~l~s~s~D-----~~v~ 349 (611)
T 1nr0_A 280 GTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-----TLFSADAE-----GHIN 349 (611)
T ss_dssp CSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-----EEEEEETT-----SCEE
T ss_pred CCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-----EEEEEeCC-----CcEE
Confidence 00 00001112333456999999987 89999999 9999
Q ss_pred EEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 203 VWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 203 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+||+.++... .. ...+|...|.+++|+|++
T Consensus 350 ~Wd~~~~~~~----~~--~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 350 SWDISTGISN----RV--FPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EEETTTCCEE----EC--SSCSCSSCEEEEEECTTS
T ss_pred EEECCCCcee----ee--cccCCcceEEEEEECCCC
Confidence 9999875422 11 123688899999999864
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=5.7e-30 Score=204.54 Aligned_cols=189 Identities=17% Similarity=0.223 Sum_probs=148.9
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecC------------------ccEEEEEEcCCC
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHA------------------GAILKVVWVPPE 68 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~ 68 (240)
.|.+.|.+++|+|+|++||+|+ ++.++||++. +++.+..+..|. ..|.+++|+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~-----~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d- 134 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVS-----DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD- 134 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETT-----TCCEEEEECC-----------------CCCCBEEEEEECTT-
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEec-----CCCEEEEecCccccccccccccccccCCCceeEEEEEECCC-
Confidence 5899999999999999999987 6899999997 344555554332 24899999999
Q ss_pred CCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccccee
Q 026295 69 FGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 69 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 148 (240)
+.+|++++.|+.|++||+..+ +.+..+.+|...|.+++|+| ++.+|++++.|++|++||+++ .+
T Consensus 135 -g~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~------~~ 198 (393)
T 1erj_A 135 -GKFLATGAEDRLIRIWDIENR-------KIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTVRIWDLRT------GQ 198 (393)
T ss_dssp -SSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTT------TE
T ss_pred -CCEEEEEcCCCeEEEEECCCC-------cEEEEEccCCCCEEEEEEcC--CCCEEEEecCCCcEEEEECCC------Ce
Confidence 999999999999999999776 88888999999999999999 999999999999999999987 34
Q ss_pred EEeeeecccceeeccccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD 227 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 227 (240)
+...+.. ...+. +++|+| ++. +|++|+.| +.|++||+.++..............+|..
T Consensus 199 ~~~~~~~-~~~v~----------~~~~~~~~~~-----~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 199 CSLTLSI-EDGVT----------TVAVSPGDGK-----YIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp EEEEEEC-SSCEE----------EEEECSTTCC-----EEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSS
T ss_pred eEEEEEc-CCCcE----------EEEEECCCCC-----EEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCC
Confidence 4444432 23333 899999 555 89999999 99999998775432222111122246888
Q ss_pred ceEEEEEecCCC
Q 026295 228 EVYAVAWALNIG 239 (240)
Q Consensus 228 ~v~~v~~sp~~~ 239 (240)
.|++++|+|++.
T Consensus 258 ~v~~v~~~~~g~ 269 (393)
T 1erj_A 258 SVYSVVFTRDGQ 269 (393)
T ss_dssp CEEEEEECTTSS
T ss_pred CEEEEEECCCCC
Confidence 999999999974
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.7e-29 Score=196.07 Aligned_cols=195 Identities=15% Similarity=0.179 Sum_probs=159.6
Q ss_pred hhcccccceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 4 AVATLDKGTTSSSWNYC-GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+|++|.+.|++++|+|+ +++|+||+.|++|+|||+.........+...+.+|...|.+++|+|+ +.+|++++.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEEEEcccccc
Confidence 47889999999999997 68999999999999999975543355677888999999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
++|+.... ........+...+..+.+++ ++.+|++++.|+.+++||+... ......+..+...+.
T Consensus 111 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~~~~~d~~~~-----~~~~~~~~~~~~~v~- 175 (340)
T 4aow_A 111 RLWDLTTG-------TTTRRFVGHTKDVLSVAFSS--DNRQIVSGSRDKTIKLWNTLGV-----CKYTVQDESHSEWVS- 175 (340)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECT--TSSCEEEEETTSCEEEECTTSC-----EEEEECSSSCSSCEE-
T ss_pred eEEeeccc-------ceeeeecCCCCceeEEEEee--cCccceeecCCCeEEEEEeCCC-----ceEEEEeccccCccc-
Confidence 99999766 66677777778888899988 8999999999999999998752 233333445555555
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+++.. ..++++++.| +.|++||+.+.. ....+. +|..+|++++|+|++.
T Consensus 176 ---------~~~~~~~~~---~~~~~s~~~d-----~~i~i~d~~~~~----~~~~~~---~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 176 ---------CVRFSPNSS---NPIIVSCGWD-----KLVKVWNLANCK----LKTNHI---GHTGYLNTVTVSPDGS 228 (340)
T ss_dssp ---------EEEECSCSS---SCEEEEEETT-----SCEEEEETTTTE----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred ---------ceEEccCCC---CcEEEEEcCC-----CEEEEEECCCCc----eeeEec---CCCCcEEEEEECCCCC
Confidence 888988765 4478889988 999999987653 233333 5778999999999874
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.2e-29 Score=216.21 Aligned_cols=197 Identities=17% Similarity=0.227 Sum_probs=159.0
Q ss_pred hhcccccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 4 AVATLDKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
.+..|.+.|++++|+|++ ++|++|+.|++|+||++.............+.+|...|.+++|+|+ +.+|++++.|+.|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD--GQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC--CCEEEEEeCCCcE
Confidence 477899999999999875 7999999999999999975432234566778899999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
++||+..+ .....+.+|...|.+++|+| ++.+|++++.|++|++||...... .........|...+.
T Consensus 455 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~D~~i~iwd~~~~~~---~~~~~~~~~h~~~v~- 521 (694)
T 3dm0_A 455 RLWDLAAG-------VSTRRFVGHTKDVLSVAFSL--DNRQIVSASRDRTIKLWNTLGECK---YTISEGGEGHRDWVS- 521 (694)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECT--TSSCEEEEETTSCEEEECTTSCEE---EEECSSTTSCSSCEE-
T ss_pred EEEECCCC-------cceeEEeCCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEECCCCcc---eeeccCCCCCCCcEE-
Confidence 99999876 88889999999999999999 999999999999999999764100 111111123444444
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. ..+|++|+.| +.|+|||+++.. ....+. +|...|++++|+|++.
T Consensus 522 ---------~~~~~~~~~---~~~l~s~s~d-----~~v~vwd~~~~~----~~~~~~---~h~~~v~~v~~spdg~ 574 (694)
T 3dm0_A 522 ---------CVRFSPNTL---QPTIVSASWD-----KTVKVWNLSNCK----LRSTLA---GHTGYVSTVAVSPDGS 574 (694)
T ss_dssp ---------EEEECSCSS---SCEEEEEETT-----SCEEEEETTTCC----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred ---------EEEEeCCCC---cceEEEEeCC-----CeEEEEECCCCc----EEEEEc---CCCCCEEEEEEeCCCC
Confidence 999999874 2379999999 999999997643 233333 5788999999999974
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.1e-30 Score=207.08 Aligned_cols=199 Identities=13% Similarity=0.156 Sum_probs=153.4
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
..+.+.|++++|+|++++|++|+.|+.|+||++... ..+++..+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN---GWKHARTFSDHDKIVTCVDWAPK--SNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT---EEEECCCBCCCSSCEEEEEECTT--TCCEEEEETTSSEEEC
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC---ceEEEEEEecCCceEEEEEEeCC--CCEEEEEeCCCeEEEE
Confidence 346679999999999999999999999999999832 33778888999999999999999 9999999999999999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec-ccceeeccc
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN-AIDSVTMFR 164 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 164 (240)
|+..+. .+.+...+..|...|.+++|+| ++.+|++++.|+.|++||++.... +.+...+.. |...+.
T Consensus 83 d~~~~~----~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~h~~~v~--- 150 (377)
T 3dwl_C 83 EKRPDG----TWKQTLVLLRLNRAATFVRWSP--NEDKFAVGSGARVISVCYFEQEND---WWVSKHLKRPLRSTIL--- 150 (377)
T ss_dssp ----------CCCCEEECCCCSSCEEEEECCT--TSSCCEEEESSSCEEECCC--------CCCCEEECSSCCSCEE---
T ss_pred EcCCCC----ceeeeeEecccCCceEEEEECC--CCCEEEEEecCCeEEEEEECCccc---ceeeeEeecccCCCeE---
Confidence 998751 1236777788999999999999 999999999999999999986321 123445555 666665
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCc-----------ceeEeeecCCCCCCceEEEE
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRW-----------LPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~-----------~~~~~~~~~~~h~~~v~~v~ 233 (240)
+++|+|++. +|++++.| +.|++||+....... .....+... +|...|++++
T Consensus 151 -------~~~~~~~~~-----~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 212 (377)
T 3dwl_C 151 -------SLDWHPNNV-----LLAAGCAD-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG 212 (377)
T ss_dssp -------EEEECTTSS-----EEEEEESS-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE
T ss_pred -------EEEEcCCCC-----EEEEEeCC-----CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE
Confidence 999999987 89999999 999999996432110 011122223 6888999999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+|++.
T Consensus 213 ~sp~~~ 218 (377)
T 3dwl_C 213 FSPSGN 218 (377)
T ss_dssp ECTTSS
T ss_pred ECCCCC
Confidence 999974
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=6.7e-29 Score=198.34 Aligned_cols=184 Identities=22% Similarity=0.242 Sum_probs=147.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeec
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
.|++++|+|+|++|++|+.|+.|+|||+. +.+.+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~-----~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIE-----NRKIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECC-----CCcEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCC
Confidence 59999999999999999999999999998 55788889999999999999999 999999999999999999776
Q ss_pred cCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-------ecccceeecc
Q 026295 91 DAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-------QNAIDSVTMF 163 (240)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-------~~~~~~v~~~ 163 (240)
++...+. +...+.+++|+|. ++.+|++++.|+.|++||+++ ..+...+ ..|...+.
T Consensus 198 -------~~~~~~~-~~~~v~~~~~~~~-~~~~l~~~s~d~~v~iwd~~~------~~~~~~~~~~~~~~~~h~~~v~-- 260 (393)
T 1erj_A 198 -------QCSLTLS-IEDGVTTVAVSPG-DGKYIAAGSLDRAVRVWDSET------GFLVERLDSENESGTGHKDSVY-- 260 (393)
T ss_dssp -------EEEEEEE-CSSCEEEEEECST-TCCEEEEEETTSCEEEEETTT------CCEEEEEC------CCCSSCEE--
T ss_pred -------eeEEEEE-cCCCcEEEEEECC-CCCEEEEEcCCCcEEEEECCC------CcEEEeecccccCCCCCCCCEE--
Confidence 6666555 4577899999873 678899999999999999987 3444333 23444444
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCc--------ceeEeeecCCCCCCceEEEEEe
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRW--------LPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~--------~~~~~~~~~~~h~~~v~~v~~s 235 (240)
+++|+|++. +|++|+.| +.|++||+++..... .....+ .+|...|++++|+
T Consensus 261 --------~v~~~~~g~-----~l~s~s~d-----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~ 319 (393)
T 1erj_A 261 --------SVVFTRDGQ-----SVVSGSLD-----RSVKLWNLQNANNKSDSKTPNSGTCEVTY---IGHKDFVLSVATT 319 (393)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----SEEEEEEC---------------CEEEEE---ECCSSCEEEEEEC
T ss_pred --------EEEECCCCC-----EEEEEeCC-----CEEEEEECCCCCCcccccCCCCCcceEEE---ecccCcEEEEEEC
Confidence 999999987 89999999 999999997643211 112222 3688899999999
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
|++.
T Consensus 320 ~~~~ 323 (393)
T 1erj_A 320 QNDE 323 (393)
T ss_dssp GGGC
T ss_pred CCCC
Confidence 9863
No 40
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.3e-29 Score=211.35 Aligned_cols=183 Identities=19% Similarity=0.310 Sum_probs=159.0
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|...|.+++|+|++++|++++.|+.|++|+.. .+.+..+.+|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~------~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVK 451 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------CCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC------CCEEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEE
Confidence 466789999999999999999999999999999964 3467788899999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||... +.+..+..|...|.+++|+| ++.+|++++.|++|++||.. +++...+..|...+.
T Consensus 452 ~w~~~~--------~~~~~~~~~~~~v~~~~~sp--d~~~las~~~d~~i~iw~~~-------~~~~~~~~~h~~~v~-- 512 (577)
T 2ymu_A 452 LWNRNG--------QLLQTLTGHSSSVRGVAFSP--DGQTIASASDDKTVKLWNRN-------GQLLQTLTGHSSSVR-- 512 (577)
T ss_dssp EEETTS--------CEEEEEECCSSCEEEEEECT--TSCEEEEEETTSEEEEEETT-------SCEEEEEECCSSCEE--
T ss_pred EEECCC--------CEEEEEcCCCCCEEEEEEcC--CCCEEEEEeCCCEEEEEcCC-------CCEEEEEeCCCCCEE--
Confidence 999743 67788889999999999999 99999999999999999954 466777888877776
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++++.| +.|+|||.. +. ....+. +|+..|++|+|+||+.
T Consensus 513 --------~l~~s~dg~-----~l~s~~~d-----g~v~lwd~~-~~----~~~~~~---~h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 513 --------GVAFSPDGQ-----TIASASDD-----KTVKLWNRN-GQ----LLQTLT---GHSSSVWGVAFSPDGQ 562 (577)
T ss_dssp --------EEEECTTSS-----CEEEEETT-----SEEEEECTT-SC----EEEEEE---CCSSCEEEEEECTTSS
T ss_pred --------EEEEcCCCC-----EEEEEECc-----CEEEEEeCC-CC----EEEEEc---CCCCCEEEEEEcCCCC
Confidence 999999987 89999999 999999953 21 333444 6888999999999974
No 41
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-29 Score=215.50 Aligned_cols=206 Identities=28% Similarity=0.432 Sum_probs=162.1
Q ss_pred CcchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 1 MDKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 1 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
|...+.+|.+.|++++|+|++++|++|+.||.|+||++... +.+.+..+.+|.+.|.+++|+|+..+.+|++++.||
T Consensus 1 ~~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~---~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 1 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT---EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred CeeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC---CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 45678899999999999999999999999999999999743 567888899999999999999875578999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCC--CcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSST--SLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
.|++||+..+ .+.....+..|...|.+++|+| + +.++++++.||.|++||++.... .....+..+..
T Consensus 78 ~I~vwd~~~~-----~~~~~~~~~~h~~~V~~v~~sp--~~~~~~l~sgs~dg~I~vwdl~~~~~----~~~~~~~~~~~ 146 (753)
T 3jro_A 78 KVLIWKEENG-----RWSQIAVHAVHSASVNSVQWAP--HEYGPLLLVASSDGKVSVVEFKENGT----TSPIIIDAHAI 146 (753)
T ss_dssp CEEEEEEETT-----EEEEEEEECCCSSCEEEEEECC--GGGCSEEEEEETTSEEEEEECCSSSC----CCCEEEECCSS
T ss_pred eEEEEECCCC-----cccccccccCCCCCeEEEEECC--CCCCCEEEEEeCCCcEEEEEeecCCC----cceeEeecCCC
Confidence 9999999875 1247778888999999999999 7 89999999999999999987321 12223445555
Q ss_pred eeeccccccceeeeEEEeCCCCC--------CCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 159 SVTMFRKASCISASISWNPQKGE--------NQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~--------~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
.+. +++|+|.... .++.+|++|+.| |.|++||+++....+.....+. +|...|+
T Consensus 147 ~v~----------~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~~~---~h~~~V~ 208 (753)
T 3jro_A 147 GVN----------SASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLE---GHSDWVR 208 (753)
T ss_dssp CEE----------EEEECCCC---------CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEEEC---CCSSCEE
T ss_pred ceE----------EEEecCcccccccccccCCCCCEEEEEECC-----CeEEEEeccCCcccceeeeeec---CCCCcEE
Confidence 555 9999995100 012289999999 9999999998765545544444 5777999
Q ss_pred EEEEecCC
Q 026295 231 AVAWALNI 238 (240)
Q Consensus 231 ~v~~sp~~ 238 (240)
+++|+|++
T Consensus 209 ~l~~sp~~ 216 (753)
T 3jro_A 209 DVAWSPTV 216 (753)
T ss_dssp EEEECCCC
T ss_pred EEEeccCC
Confidence 99999993
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=6.9e-30 Score=217.73 Aligned_cols=187 Identities=19% Similarity=0.238 Sum_probs=156.7
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|...|.+++|+|++++|++|+.|++|+|||+. +...+..+.+|...|.+++|+|+ +.+|++++.|++|+
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~-----~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA-----AGVSTRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIK 497 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC-----CCcceeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEE
Confidence 467899999999999999999999999999999998 56788889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEE---eeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 84 LWEEIVEDAQPLQWKLCKS---FESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
+||.... ..... ..+|...|.+++|+|......+++++.|++|++||++. .++...+..|...+
T Consensus 498 iwd~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~------~~~~~~~~~h~~~v 564 (694)
T 3dm0_A 498 LWNTLGE-------CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN------CKLRSTLAGHTGYV 564 (694)
T ss_dssp EECTTSC-------EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT------CCEEEEECCCSSCE
T ss_pred EEECCCC-------cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC------CcEEEEEcCCCCCE
Confidence 9998543 22222 23578889999999932236799999999999999987 56677777887777
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
. +++|+|++. +|++|+.| +.|+|||+.++... ..+. +...|++++|+|++
T Consensus 565 ~----------~v~~spdg~-----~l~sg~~D-----g~i~iwd~~~~~~~----~~~~----~~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 565 S----------TVAVSPDGS-----LCASGGKD-----GVVLLWDLAEGKKL----YSLE----ANSVIHALCFSPNR 614 (694)
T ss_dssp E----------EEEECTTSS-----EEEEEETT-----SBCEEEETTTTEEE----ECCB----CSSCEEEEEECSSS
T ss_pred E----------EEEEeCCCC-----EEEEEeCC-----CeEEEEECCCCceE----EEec----CCCcEEEEEEcCCC
Confidence 6 999999987 89999999 99999999876422 2222 44589999999986
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=2.7e-30 Score=205.58 Aligned_cols=199 Identities=14% Similarity=0.185 Sum_probs=155.8
Q ss_pred hhcccccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe-----eecCccEEEEEEcCCCCCCEEEEEe
Q 026295 4 AVATLDKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKT-----KVHAGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
.+.+|.+.|.+++|+|++ .+|++|+.|++|++||+. +.+.+..+ .+|...|.++.|++. .+.+|++++
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~-----~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sgs 225 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVT-----TGQRISIFGSEFPSGHTADVLSLSINSL-NANMFISGS 225 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTT-----TCCEEEEECCCSSSSCCSCEEEEEECSS-SCCEEEEEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcC-----CCcEEEEeecccCCCCccCeEEEEeecC-CCCEEEEEE
Confidence 366899999999999974 679999999999999998 44555555 578999999999873 288999999
Q ss_pred cCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc
Q 026295 78 SDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 78 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
.|+.|++||++... ..+..+.+|...|.+++|+| ++.+|++++.||+|++||+++ ......+..+.
T Consensus 226 ~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~D~~i~lwd~~~------~~~~~~~~~~~ 291 (380)
T 3iz6_a 226 CDTTVRLWDLRITS------RAVRTYHGHEGDINSVKFFP--DGQRFGTGSDDGTCRLFDMRT------GHQLQVYNREP 291 (380)
T ss_dssp TTSCEEEEETTTTC------CCCEEECCCSSCCCEEEECT--TSSEEEEECSSSCEEEEETTT------TEEEEEECCCC
T ss_pred CCCeEEEEECCCCC------cceEEECCcCCCeEEEEEec--CCCeEEEEcCCCeEEEEECCC------CcEEEEecccc
Confidence 99999999996321 56778889999999999999 999999999999999999987 34444443322
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEee-ecCCCCCCceEEEEEec
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAEL-ALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~sp 236 (240)
.. .......+.+++|+|++. +|++|+.| +.|++||....... ..+ ....+|...|++++|+|
T Consensus 292 ~~---~~~~~~~v~~~~~s~~g~-----~l~~g~~d-----g~i~vwd~~~~~~~----~~~~~~~~~h~~~v~~l~~s~ 354 (380)
T 3iz6_a 292 DR---NDNELPIVTSVAFSISGR-----LLFAGYSN-----GDCYVWDTLLAEMV----LNLGTLQNSHEGRISCLGLSS 354 (380)
T ss_dssp SS---SCCSSCSCSEEEECSSSS-----EEEEECTT-----SCEEEEETTTCCEE----EEECCSCSSCCCCCCEEEECS
T ss_pred cc---cccccCceEEEEECCCCC-----EEEEEECC-----CCEEEEECCCCceE----EEEecccCCCCCceEEEEECC
Confidence 11 011122344899999988 89999998 99999998765422 222 12346888999999999
Q ss_pred CCC
Q 026295 237 NIG 239 (240)
Q Consensus 237 ~~~ 239 (240)
|+.
T Consensus 355 dg~ 357 (380)
T 3iz6_a 355 DGS 357 (380)
T ss_dssp SSS
T ss_pred CCC
Confidence 974
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=5.7e-29 Score=197.78 Aligned_cols=191 Identities=16% Similarity=0.155 Sum_probs=155.6
Q ss_pred hhcccccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC-CCCCCEEEEEecCCe
Q 026295 4 AVATLDKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP-PEFGDAVACICSDGS 81 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~ 81 (240)
.+..|.+.|++++|+|++ ++|++|+.|+.|+|||+... .........+|...|.+++|+| + +.+|++++.|+.
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~ 142 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ---NKTSFIQGMGPGDAITGMKFNQFN--TNQLFVSSIRGA 142 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST---TCEEEECCCSTTCBEEEEEEETTE--EEEEEEEETTTE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc---ccceeeecCCcCCceeEEEeCCCC--CCEEEEEeCCCE
Confidence 466899999999999999 99999999999999999843 2233333447999999999999 6 789999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeee---ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFES---TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
|++||+.. ..+..+.. +...|.+++|+| ++.+|++++.|+.|++||++ .+....+..|..
T Consensus 143 i~iwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~h~~ 205 (383)
T 3ei3_B 143 TTLRDFSG--------SVIQVFAKTDSWDYWYCCVDVSV--SRQMLATGDSTGRLLLLGLD-------GHEIFKEKLHKA 205 (383)
T ss_dssp EEEEETTS--------CEEEEEECCCCSSCCEEEEEEET--TTTEEEEEETTSEEEEEETT-------SCEEEEEECSSS
T ss_pred EEEEECCC--------CceEEEeccCCCCCCeEEEEECC--CCCEEEEECCCCCEEEEECC-------CCEEEEeccCCC
Confidence 99999974 34444443 447899999999 99999999999999999985 356667777777
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEec-C
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL-N 237 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~ 237 (240)
.+. +++|+|++.. +|++|+.| +.|++||+++..........+ +|...|++++|+| +
T Consensus 206 ~v~----------~~~~~~~~~~----~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~ 262 (383)
T 3ei3_B 206 KVT----------HAEFNPRCDW----LMATSSVD-----ATVKLWDLRNIKDKNSYIAEM----PHEKPVNAAYFNPTD 262 (383)
T ss_dssp CEE----------EEEECSSCTT----EEEEEETT-----SEEEEEEGGGCCSTTCEEEEE----ECSSCEEEEEECTTT
T ss_pred cEE----------EEEECCCCCC----EEEEEeCC-----CEEEEEeCCCCCcccceEEEe----cCCCceEEEEEcCCC
Confidence 776 9999999852 78999998 999999998855433344444 3777999999999 7
Q ss_pred CC
Q 026295 238 IG 239 (240)
Q Consensus 238 ~~ 239 (240)
+.
T Consensus 263 ~~ 264 (383)
T 3ei3_B 263 ST 264 (383)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=9.9e-30 Score=200.71 Aligned_cols=196 Identities=14% Similarity=0.176 Sum_probs=145.2
Q ss_pred hcccccceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGST------DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
...|+..|++++|+|||++||+|+. |+.|++|+...... ..........|...|.+++|+|+ +. +++++.
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~-~~~~~~~~~~~~~~V~~~~~s~d--~~-~l~~s~ 113 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP-NESLCTAGVQTEAGVTDVAWVSE--KG-ILVASD 113 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----CGGGCSEEEECSSCEEEEEEETT--TE-EEEEET
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc-ceeEecccCCCCCCEEEEEEcCC--CC-EEEEEC
Confidence 3469999999999999999999997 67899998863210 11122334578899999999998 65 556788
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
|++|++||+..+... ........+|...|.+++|+| ++.+|++++.|++|++||+++ .++...+..|..
T Consensus 114 dg~v~lWd~~~~~~~---~~~~~~~~~h~~~V~~v~~sp--dg~~l~sgs~dg~v~iwd~~~------~~~~~~~~~h~~ 182 (357)
T 4g56_B 114 SGAVELWEILEKESL---LVNKFAKYEHDDIVKTLSVFS--DGTQAVSGGKDFSVKVWDLSQ------KAVLKSYNAHSS 182 (357)
T ss_dssp TSCEEEC-----------CCCCEEECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTT------TEEEEEECCCSS
T ss_pred CCEEEEeecccccee---EEEeeccCCCCCCEEEEEECC--CCCEEEEEeCCCeEEEEECCC------CcEEEEEcCCCC
Confidence 999999999765210 001123346889999999999 999999999999999999987 577777878877
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
.+. +++|+|++.. +|++++.| +.|++||++++...... . ...|...|++++|+|+.
T Consensus 183 ~v~----------~v~~s~~~~~----~~~s~~~d-----g~v~~wd~~~~~~~~~~----~-~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 183 EVN----------CVAACPGKDT----IFLSCGED-----GRILLWDTRKPKPATRI----D-FCASDTIPTSVTWHPEK 238 (357)
T ss_dssp CEE----------EEEECTTCSS----CEEEEETT-----SCEEECCTTSSSCBCBC----C-CTTCCSCEEEEEECTTS
T ss_pred CEE----------EEEEccCCCc----eeeeeccC-----CceEEEECCCCceeeee----e-eccccccccchhhhhcc
Confidence 776 9999998742 78999998 99999999876533222 1 22466689999999986
Q ss_pred C
Q 026295 239 G 239 (240)
Q Consensus 239 ~ 239 (240)
+
T Consensus 239 ~ 239 (357)
T 4g56_B 239 D 239 (357)
T ss_dssp T
T ss_pred c
Confidence 5
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=2.1e-29 Score=201.66 Aligned_cols=193 Identities=16% Similarity=0.228 Sum_probs=157.0
Q ss_pred hcccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCC--cEEEEeEeeecCccEEEEEEcCCCCC-CEEEEEecCC
Q 026295 5 VATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSS--SFTCNLKTKVHAGAILKVVWVPPEFG-DAVACICSDG 80 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~d~ 80 (240)
+..|.+.|++++|+| ++++|++|+.||.|+||++...... ..+++..+.+|...|.+++|+|+ + .+|++++.|+
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg 154 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT--AQNVLLSAGCDN 154 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS--BTTEEEEEETTS
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC--CCCEEEEEcCCC
Confidence 567999999999999 8999999999999999999743100 01356678899999999999998 7 6999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEe--eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-eccc
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSF--ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAI 157 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~ 157 (240)
.|++||+..+ +.+..+ ..|...|.+++|+| ++.+|++++.||.|++||+++ .+....+ ..+.
T Consensus 155 ~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~------~~~~~~~~~~~~ 219 (402)
T 2aq5_A 155 VILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSR--DGALICTSCRDKRVRVIEPRK------GTVVAEKDRPHE 219 (402)
T ss_dssp CEEEEETTTT-------EEEEEECTTTCCSCEEEEEECT--TSSCEEEEETTSEEEEEETTT------TEEEEEEECSSC
T ss_pred EEEEEECCCC-------CccEEEecCCCCCceEEEEECC--CCCEEEEEecCCcEEEEeCCC------CceeeeeccCCC
Confidence 9999999876 788888 77889999999999 999999999999999999987 4556665 4454
Q ss_pred ce-eeccccccceeeeEEEeCCCCCCCCceEEEE---ecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 158 DS-VTMFRKASCISASISWNPQKGENQGSSFVLG---FNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 158 ~~-v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~---~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
.. +. .+.|+|++. +|++| +.| +.|++||+.+....... ..+ .|...|.+++
T Consensus 220 ~~~~~----------~~~~~~~~~-----~l~~g~~~~~d-----~~i~iwd~~~~~~~~~~-~~~----~~~~~v~~~~ 274 (402)
T 2aq5_A 220 GTRPV----------HAVFVSEGK-----ILTTGFSRMSE-----RQVALWDTKHLEEPLSL-QEL----DTSSGVLLPF 274 (402)
T ss_dssp SSSCC----------EEEECSTTE-----EEEEEECTTCC-----EEEEEEETTBCSSCSEE-EEC----CCCSSCEEEE
T ss_pred CCcce----------EEEEcCCCc-----EEEEeccCCCC-----ceEEEEcCccccCCceE-Eec----cCCCceeEEE
Confidence 33 33 899999876 78888 566 99999999876542211 121 3666899999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+|++.
T Consensus 275 ~s~~~~ 280 (402)
T 2aq5_A 275 FDPDTN 280 (402)
T ss_dssp EETTTT
T ss_pred EcCCCC
Confidence 999974
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-28 Score=193.21 Aligned_cols=204 Identities=19% Similarity=0.339 Sum_probs=163.4
Q ss_pred hhcccccceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 4 AVATLDKGTTSSSWNYC--GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+..|.+.|++++|+++ +++|++|+.||.|+|||+... ....+..+..|...|.+++|+|+..+.+|++++.|+.
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 126 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 126 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC---ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc
Confidence 46679999999999987 999999999999999999843 3447778888999999999998733689999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC-----------CCcEEEEEeCCCcEEEEEecCcccccceeEE
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS-----------TSLKLVAAYSDGHVKVYELLDPLILKNWQLQ 150 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 150 (240)
|++||+..... .....+..|...|.+++|+|.. ++.+|++++.||.|++||++.... .+.+.
T Consensus 127 i~v~d~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~ 199 (379)
T 3jrp_A 127 VSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLE 199 (379)
T ss_dssp EEEEECCTTSC-----CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT--EEEEE
T ss_pred EEEEecCCCCc-----eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc--ceeeE
Confidence 99999976522 3444567788999999998821 378899999999999999986422 14455
Q ss_pred eeeecccceeeccccccceeeeEEEeCC---CCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQ---KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD 227 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~---~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 227 (240)
..+..|...+. +++|+|+ +. +|++++.| +.|++||+......+.. .+.....|..
T Consensus 200 ~~~~~h~~~v~----------~~~~sp~~~~~~-----~l~s~~~d-----g~i~iwd~~~~~~~~~~--~~~~~~~~~~ 257 (379)
T 3jrp_A 200 STLEGHSDWVR----------DVAWSPTVLLRS-----YLASVSQD-----RTCIIWTQDNEQGPWKK--TLLKEEKFPD 257 (379)
T ss_dssp EEECCCSSCEE----------EEEECCCCSSSE-----EEEEEETT-----SCEEEEEESSTTSCCEE--EESSSSCCSS
T ss_pred EEEecccCcEe----------EEEECCCCCCCC-----eEEEEeCC-----CEEEEEeCCCCCcccee--eeeccccCCC
Confidence 66667777666 9999999 55 89999999 99999999886543222 2223345888
Q ss_pred ceEEEEEecCCC
Q 026295 228 EVYAVAWALNIG 239 (240)
Q Consensus 228 ~v~~v~~sp~~~ 239 (240)
.|++++|+|++.
T Consensus 258 ~v~~~~~s~~g~ 269 (379)
T 3jrp_A 258 VLWRASWSLSGN 269 (379)
T ss_dssp CEEEEEECSSSC
T ss_pred cEEEEEEcCCCC
Confidence 999999999975
No 48
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9.2e-29 Score=194.67 Aligned_cols=125 Identities=16% Similarity=0.263 Sum_probs=107.4
Q ss_pred hhcccccceEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 4 AVATLDKGTTSSSWNYC---GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
.+..|.+.|++++|+|+ |++|++|+.||.|+||++... .......+.+|...|.+++|+|+ +++|++++.|+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg 108 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS---GQTIPKAQQMHTGPVLDVCWSDD--GSKVFTASCDK 108 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT---SCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTS
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC---CceeEEEeccccCCEEEEEECcC--CCEEEEEcCCC
Confidence 46789999999999999 699999999999999999842 12344678889999999999999 99999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCc
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
.|++||+..+ +... +..|...|.+++|+|..++.+|++++.||.|++||+++.
T Consensus 109 ~v~iwd~~~~-------~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 109 TAKMWDLSSN-------QAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EEEEEETTTT-------EEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred cEEEEEcCCC-------Ccee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 9999999765 4444 566889999999944338999999999999999998764
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=6.2e-29 Score=196.69 Aligned_cols=188 Identities=15% Similarity=0.108 Sum_probs=142.0
Q ss_pred cccceEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 8 LDKGTTSSSWNYCGQRLATG--STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
++..+.+++|||||++|+++ +.|++|+|||+. +.+++..+. |.+.|.+++|+|+ |+++++++.++ +++|
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~-----~~~~~~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~ 202 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS-----DLTEKFEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVI 202 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT-----TTEEEEEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEE
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC-----CCcEEEEeC-CCCceEEEEEccC--CceEEecccee-EEEE
Confidence 44568899999999998754 478999999998 567777775 7788999999999 99999988555 5555
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC----cEEEEEecCcccccceeEEeeeecccceee
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG----HVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
+...+.. ........|...|.+++|+| ++.++++++.|+ .+++|++..... .......+..+...|.
T Consensus 203 ~~~~~~~-----~~~~~~~~~~~~v~~v~fsp--dg~~l~~~s~d~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 203 STVTGSC-----IARKTDFDKNWSLSKINFIA--DDTVLIAASLKKGKGIVLTKISIKSGNT--SVLRSKQVTNRFKGIT 273 (365)
T ss_dssp ETTTCCE-----EEEECCCCTTEEEEEEEEEE--TTEEEEEEEESSSCCEEEEEEEEETTEE--EEEEEEEEESSCSCEE
T ss_pred EeccCcc-----eeeeecCCCCCCEEEEEEcC--CCCEEEEEecCCcceeEEeeccccccee--cceeeeeecCCCCCeE
Confidence 5544310 22234456788999999999 999999999887 578888875211 0122334555665665
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +||+|+.| +.|+|||+.+.+ .... ...+|..+|++|+||||+.
T Consensus 274 ----------~~~~Spdg~-----~lasgs~D-----~~V~iwd~~~~~----~~~~--~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 274 ----------SMDVDMKGE-----LAVLASND-----NSIALVKLKDLS----MSKI--FKQAHSFAITEVTISPDST 325 (365)
T ss_dssp ----------EEEECTTSC-----EEEEEETT-----SCEEEEETTTTE----EEEE--ETTSSSSCEEEEEECTTSC
T ss_pred ----------eEEECCCCC-----ceEEEcCC-----CEEEEEECCCCc----EEEE--ecCcccCCEEEEEECCCCC
Confidence 999999998 99999999 999999988753 2222 1346888999999999984
No 50
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=4.3e-29 Score=208.21 Aligned_cols=193 Identities=18% Similarity=0.290 Sum_probs=153.2
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
+|++|.+.|++++|+|+|++||+|+.|+.|+|||.. .+++..+.+|.+.|.+++|+|+ +++|++++.|+.|+
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~------~~~~~~l~gh~~~V~~l~fspd--g~~las~~~d~~i~ 82 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPD--GQTIASASDDKTVK 82 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------SCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEE
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC------CCEEEEEeCCCCCEEEEEECCC--CCEEEEEeCCCEEE
Confidence 488999999999999999999999999999999954 3577889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee---
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV--- 160 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v--- 160 (240)
+||... +++..+.+|...|.+++|+| ++.+|++++.|+.+++|+...... .....+...+
T Consensus 83 vWd~~~--------~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 83 LWNRNG--------QLLQTLTGHSSSVRGVAFSP--DGQTIASASDDKTVKLWNRNGQLL-------QTLTGHSSSVWGV 145 (577)
T ss_dssp EEETTS--------CEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTCCEE-------EEECCCSSCEEEE
T ss_pred EEECCC--------CEEEEEECCCCCEEEEEECC--CCCEEEEEcCCCceeeccccccee-------eeccCCCCceeee
Confidence 999643 67888999999999999999 999999999999999999753210 0111110000
Q ss_pred ----------------------------eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCC
Q 026295 161 ----------------------------TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNR 212 (240)
Q Consensus 161 ----------------------------~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~ 212 (240)
.....+...+..+.|+|++. +|++++.| +.|++|+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d-----~~v~~w~~~~---- 211 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ-----TIASASDD-----KTVKLWNRNG---- 211 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSS-----CEEEEETT-----SEEEEECTTS----
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCC-----EEEEEcCC-----CEEEEEeCCC----
Confidence 00011222445788999887 89999999 9999999532
Q ss_pred cceeEeeecCCCCCCceEEEEEecCCC
Q 026295 213 WLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 213 ~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.....+. +|...|++++|+||+.
T Consensus 212 -~~~~~~~---~~~~~v~~~~~s~dg~ 234 (577)
T 2ymu_A 212 -QLLQTLT---GHSSSVRGVAFSPDGQ 234 (577)
T ss_dssp -CEEEEEE---CCSSCEEEEEECTTSS
T ss_pred -cEEEEEe---cCCCCEEEEEECCCCC
Confidence 1233334 5777999999999974
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=5.4e-29 Score=195.99 Aligned_cols=205 Identities=16% Similarity=0.292 Sum_probs=155.8
Q ss_pred cccceEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC-CCCCCEEEEEecCCeE
Q 026295 8 LDKGTTSSSWNYC----GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP-PEFGDAVACICSDGSL 82 (240)
Q Consensus 8 h~~~v~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v 82 (240)
|...|.+++|+|+ +++|++|+.||.|++||+. +.+.+..+.+|...|.+++|+| + +.+|++++.|+.|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-----~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~i 140 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-----TMQCIKHYVGHGNAINELKFHPRD--PNLLLSVSKDHAL 140 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT-----TCCEEEEEESCCSCEEEEEECSSC--TTEEEEEETTSCE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch-----hceEeeeecCCCCcEEEEEECCCC--CCEEEEEeCCCeE
Confidence 5678999999998 6799999999999999998 5567888889999999999999 7 8999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEe---eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccccee-----------
Q 026295 83 LLWEEIVEDAQPLQWKLCKSF---ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQ----------- 148 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~----------- 148 (240)
++||++.+ +.+..+ ..|...|.+++|+| ++.+|++++.||.|++||+++........
T Consensus 141 ~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
T 3k26_A 141 RLWNIQTD-------TLVAIFGGVEGHRDEVLSADYDL--LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTN 211 (366)
T ss_dssp EEEETTTT-------EEEEEECSTTSCSSCEEEEEECT--TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCS
T ss_pred EEEEeecC-------eEEEEecccccccCceeEEEECC--CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCc
Confidence 99999876 777777 67889999999999 99999999999999999998642210000
Q ss_pred -------------------------------E---------Eeeeeccc---------------ceeeccccccceeeeE
Q 026295 149 -------------------------------L---------QAEFQNAI---------------DSVTMFRKASCISASI 173 (240)
Q Consensus 149 -------------------------------~---------~~~~~~~~---------------~~v~~~~~~~~~~~~v 173 (240)
. +..+.... ..+.....+...+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (366)
T 3k26_A 212 RPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291 (366)
T ss_dssp SCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred ccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence 0 00000000 0011111122245578
Q ss_pred EEeCC--CCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 174 SWNPQ--KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 174 ~~~p~--~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+|+|+ +. +|++|+.| +.|++||+.+..........+..+. |...|++++|+|++.
T Consensus 292 ~~s~~~~~~-----~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 292 RFSMDFWQK-----MLALGNQV-----GKLYVWDLEVEDPHKAKCTTLTHHK-CGAAIRQTSFSRDSS 348 (366)
T ss_dssp CCEECTTSS-----EEEEECTT-----SCEEEEECCSSSGGGCEEEEECCTT-CCSCEEEEEECTTSS
T ss_pred EEcCCCCCc-----EEEEEecC-----CcEEEEECCCCCCccccceEEcccc-cCCceEEEEeCCCCC
Confidence 88888 65 89999998 9999999988765544444554332 367999999999874
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=2.6e-28 Score=197.36 Aligned_cols=200 Identities=14% Similarity=0.221 Sum_probs=148.6
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCC------CCcEEEEeEeeecC------------ccEEEEEEcCCC
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPS------SSSFTCNLKTKVHA------------GAILKVVWVPPE 68 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~h~------------~~v~~~~~~~~~ 68 (240)
.+.+.|++++|+|+|++||+|+.||.|+||++.... ....+....+.+|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~- 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ- 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC-
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC-
Confidence 356899999999999999999999999999997431 01334678888998 88999999998
Q ss_pred CC--CEEEEEecCCeEEEEEeeeccCC--------------------Ccc------------cEEEEE-eeeccccEEeE
Q 026295 69 FG--DAVACICSDGSLLLWEEIVEDAQ--------------------PLQ------------WKLCKS-FESTSTQVLDV 113 (240)
Q Consensus 69 ~~--~~l~s~~~d~~v~iwd~~~~~~~--------------------~~~------------~~~~~~-~~~~~~~v~~~ 113 (240)
+ .+|++++.|+.|++||+...... ... ..+... ..+|...|.++
T Consensus 105 -~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 105 -KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp -CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred -CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 6 78999999999999999764110 000 001112 24688999999
Q ss_pred EEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEee-------eecccceeeccccccceeeeEEEeCCC-CCCCCc
Q 026295 114 QFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAE-------FQNAIDSVTMFRKASCISASISWNPQK-GENQGS 185 (240)
Q Consensus 114 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~v~~~p~~-~~~~~~ 185 (240)
+|+| ++.+|+++ .|+.|++||++.. ...... +..|...+ .+++|+|++ .
T Consensus 184 ~~~~--~~~~l~s~-~d~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~v----------~~~~~~p~~~~----- 240 (447)
T 3dw8_B 184 SINS--DYETYLSA-DDLRINLWHLEIT-----DRSFNIVDIKPANMEELTEVI----------TAAEFHPNSCN----- 240 (447)
T ss_dssp EECT--TSSEEEEE-CSSEEEEEETTEE-----EEEEEEEECCCSSGGGCCCCE----------EEEEECSSCTT-----
T ss_pred EEcC--CCCEEEEe-CCCeEEEEECCCC-----CceeeeeecccccccccCcce----------EEEEECCCCCc-----
Confidence 9999 99999998 7999999999842 222322 23344444 499999998 5
Q ss_pred eEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC------------ceEEEEEecCCC
Q 026295 186 SFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD------------EVYAVAWALNIG 239 (240)
Q Consensus 186 ~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~------------~v~~v~~sp~~~ 239 (240)
+|++|+.| +.|++||+++..........+. +|.. .|++++|+|++.
T Consensus 241 ~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 241 TFVYSSSK-----GTIRLCDMRASALCDRHSKLFE---EPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp EEEEEETT-----SCEEEEETTTCSSSCTTCEEEC---CC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred EEEEEeCC-----CeEEEEECcCCccccceeeEec---cCCCccccccccccCceEEEEEECCCCC
Confidence 89999999 9999999987664222223333 3443 899999999874
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-28 Score=191.25 Aligned_cols=195 Identities=13% Similarity=0.149 Sum_probs=157.0
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|.+.|++++|+|++++|++|+.||.|+|||+. +.+.+..+.+|...|.+++|+|+ +++|++++.|+.|+
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL-----NGERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADYSIK 99 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT-----TCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----CchhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCCeEE
Confidence 478899999999999999999999999999999998 55778889999999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCccccccee-----EEeee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQ-----LQAEF 153 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~-----~~~~~ 153 (240)
+||+..+ +.+..+. +...+.+++|+| ++.++++++.+ +.|++||+.......... ....+
T Consensus 100 iwd~~~~-------~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 100 LWDVSNG-------QCVATWK-SPVPVKRVEFSP--CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEETTTC-------CEEEEEE-CSSCEEEEEECT--TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred EEECCCC-------cEEEEee-cCCCeEEEEEcc--CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 9999776 6677776 778999999999 99999999999 999999998643322111 11112
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
..+.. ...+.+++|+|++. +|++++.| +.|++||+.+.. .....+. .|...|++++
T Consensus 170 ~~~~~--------~~~~~~~~~~~~~~-----~l~~~~~d-----g~i~i~d~~~~~---~~~~~~~---~~~~~v~~~~ 225 (369)
T 3zwl_B 170 ITHEG--------LDAATVAGWSTKGK-----YIIAGHKD-----GKISKYDVSNNY---EYVDSID---LHEKSISDMQ 225 (369)
T ss_dssp ECCTT--------CCCEEEEEECGGGC-----EEEEEETT-----SEEEEEETTTTT---EEEEEEE---CCSSCEEEEE
T ss_pred cCCcC--------ccceeEEEEcCCCC-----EEEEEcCC-----CEEEEEECCCCc---EeEEEEe---cCCCceeEEE
Confidence 22221 11334899999987 89999998 999999987632 2233333 4677999999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+|++.
T Consensus 226 ~~~~~~ 231 (369)
T 3zwl_B 226 FSPDLT 231 (369)
T ss_dssp ECTTSS
T ss_pred ECCCCC
Confidence 999874
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-29 Score=205.44 Aligned_cols=193 Identities=13% Similarity=0.110 Sum_probs=146.7
Q ss_pred hcccccceEEEEECCC------CCEEEEEeCCCcEEEEeCCCCCCCc------EEEEeEeeecCccEEEEEEcCCCCCCE
Q 026295 5 VATLDKGTTSSSWNYC------GQRLATGSTDGTLSIFDSPDPSSSS------FTCNLKTKVHAGAILKVVWVPPEFGDA 72 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~------~~~l~~~~~d~~i~iw~~~~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~~ 72 (240)
+..|.+.|.+++|+|+ +.+||+++.||+|+|||+....... ..+...+.+|...|.+++|+++ ..
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~---~~ 279 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP---TT 279 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS---SE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC---Ce
Confidence 4456789999999996 5799999999999999997432110 0122467789999999999875 47
Q ss_pred EEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeE--EEeecCCC-cEEEEEeCCCcEEEEEecCcccccceeE
Q 026295 73 VACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDV--QFGVSSTS-LKLVAAYSDGHVKVYELLDPLILKNWQL 149 (240)
Q Consensus 73 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 149 (240)
|++|+.||+|++||++.+. .+...+..|...|.++ .|+| ++ .+|++++.|++|+|||+++. ++
T Consensus 280 lasgs~DgtV~lWD~~~~~------~~~~~~~~H~~~V~sv~~~~s~--~g~~~laS~S~D~tvklWD~~~~------~~ 345 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE------VPSFYDQVHDSYILSVSTAYSD--FEDTVVSTVAVDGYFYIFNPKDI------AT 345 (524)
T ss_dssp EEEEETTSEEEEEETTBCS------SCSEEEECSSSCEEEEEEECCT--TSCCEEEEEETTSEEEEECGGGH------HH
T ss_pred EEEEeCCCEEEEEECCCCC------CceEEeecccccEEEEEEEcCC--CCCeEEEEeccCCeEEEEECCCC------Cc
Confidence 9999999999999997541 3445678899999999 4566 77 78999999999999999873 33
Q ss_pred EeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCce
Q 026295 150 QAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEV 229 (240)
Q Consensus 150 ~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v 229 (240)
...+..+... ..+.+++|+|++. .|++++.| ++|++||++...... .+. +|.+.|
T Consensus 346 ~~~~~~~~~~--------~~v~~v~fsp~~~-----~l~s~~~d-----~tv~lwd~~~~~~~~----~l~---gH~~~V 400 (524)
T 2j04_B 346 TKTTVSRFRG--------SNLVPVVYCPQIY-----SYIYSDGA-----SSLRAVPSRAAFAVH----PLV---SRETTI 400 (524)
T ss_dssp HCEEEEECSC--------CSCCCEEEETTTT-----EEEEECSS-----SEEEEEETTCTTCCE----EEE---ECSSCE
T ss_pred cccccccccc--------CcccceEeCCCcC-----eEEEeCCC-----CcEEEEECcccccce----eee---cCCCce
Confidence 3333333210 0123899999987 78888888 999999998765332 233 478899
Q ss_pred EEEEEecCCC
Q 026295 230 YAVAWALNIG 239 (240)
Q Consensus 230 ~~v~~sp~~~ 239 (240)
++|+|+|++.
T Consensus 401 ~sva~Sp~g~ 410 (524)
T 2j04_B 401 TAIGVSRLHP 410 (524)
T ss_dssp EEEECCSSCC
T ss_pred EEEEeCCCCC
Confidence 9999999874
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=7.5e-28 Score=190.07 Aligned_cols=197 Identities=14% Similarity=0.199 Sum_probs=155.4
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|.+.|++++|+|++++|++|+.|+.|+||++... ..+.+..+.+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---KWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYV 78 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT---EEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC---cEEeeeeecCCCCcccEEEEeCC--CCEEEEEcCCCeEEE
Confidence 3458899999999999999999999999999999743 33478888999999999999999 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-ecccceeecc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAIDSVTMF 163 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 163 (240)
||+..+. +.....+..+...|.+++|+| ++.+|++++.|+.|++||++.... ......+ ..|...+.
T Consensus 79 wd~~~~~-----~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~d~~~~~~---~~~~~~~~~~~~~~i~-- 146 (372)
T 1k8k_C 79 WTLKGRT-----WKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVISICYFEQEND---WWVCKHIKKPIRSTVL-- 146 (372)
T ss_dssp EEEETTE-----EEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEEEEEEETTTT---EEEEEEECTTCCSCEE--
T ss_pred EECCCCe-----eeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCEEEEEEecCCCc---ceeeeeeecccCCCee--
Confidence 9997651 123444466888999999999 999999999999999999986321 1222222 33444454
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCC--------------CcceeEeeecCCCCCCce
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHN--------------RWLPVAELALPEDRSDEV 229 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~--------------~~~~~~~~~~~~~h~~~v 229 (240)
+++|+|++. +|++++.| +.|++||+..... .......+ .+|...|
T Consensus 147 --------~~~~~~~~~-----~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v 205 (372)
T 1k8k_C 147 --------SLDWHPNSV-----LLAAGSCD-----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES---SSSCGWV 205 (372)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC---CCCSSCE
T ss_pred --------EEEEcCCCC-----EEEEEcCC-----CCEEEEEcccccccccccccccccccchhhheEec---CCCCCeE
Confidence 999999887 89999998 9999999753210 11223333 3577899
Q ss_pred EEEEEecCCC
Q 026295 230 YAVAWALNIG 239 (240)
Q Consensus 230 ~~v~~sp~~~ 239 (240)
++++|+|++.
T Consensus 206 ~~~~~~~~~~ 215 (372)
T 1k8k_C 206 HGVCFSANGS 215 (372)
T ss_dssp EEEEECSSSS
T ss_pred EEEEECCCCC
Confidence 9999999873
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=2.3e-28 Score=211.27 Aligned_cols=188 Identities=13% Similarity=0.204 Sum_probs=163.0
Q ss_pred cchhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 2 DKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 2 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+.+.+|.+.|.+++|+|++++||+|+.||.|+|||+. +++.+..+.+|.++|.+++|+|+ +.+|++++.|+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~-----~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~ 78 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE-----TQVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFR 78 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC-----CCceEEEEecCCCcEEEEEEeCC--CCEEEEEeCCCe
Confidence 35688999999999999999999999999999999998 56788889999999999999999 999999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
|++||+.++ +.+..+..|...|.+++|+| ++.+|++++.||.|++||+.+. +.....+..|...+.
T Consensus 79 i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~-----~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 79 IRVFNYNTG-------EKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENN-----WALEQTFEGHEHFVM 144 (814)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECS--SSSEEEEEETTSEEEEEEGGGT-----SEEEEEEECCSSCEE
T ss_pred EEEEECCCC-------cEEEEEecCCCCEEEEEEeC--CCCEEEEEcCCCEEEEEECCCC-----ceEEEEEcCCCCcEE
Confidence 999999776 78888889999999999999 9999999999999999999763 356666777776666
Q ss_pred ccccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEec
Q 026295 162 MFRKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 236 (240)
+++|+| ++. +|++++.| +.|++||+.+....... .. +|...|+.++|+|
T Consensus 145 ----------~~~~~p~~~~-----~l~~~~~d-----g~v~vwd~~~~~~~~~~----~~--~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 145 ----------CVAFNPKDPS-----TFASGCLD-----RTVKVWSLGQSTPNFTL----TT--GQERGVNYVDYYP 194 (814)
T ss_dssp ----------EEEEETTEEE-----EEEEEETT-----SEEEEEETTCSSCSEEE----EC--CCTTCCCEEEECC
T ss_pred ----------EEEEEcCCCC-----EEEEEeCC-----CeEEEEECCCCcceeEE----ec--CCCCCEEEEEEEE
Confidence 999999 555 89999999 99999999776543322 11 3446899999999
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=2.2e-27 Score=187.43 Aligned_cols=197 Identities=16% Similarity=0.195 Sum_probs=156.5
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|...|.+++|+|++++|++++.|+.|++||+... .......+..|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR---TWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVIS 121 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT---EEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC---eeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEE
Confidence 46679999999999999999999999999999999733 33334445678999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEe-eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccc------------ccceeEE
Q 026295 84 LWEEIVEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLI------------LKNWQLQ 150 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~------------~~~~~~~ 150 (240)
+||+.... .+.....+ ..|...|.+++|+| ++.+|++++.||.|++||++.... ....+..
T Consensus 122 i~d~~~~~----~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (372)
T 1k8k_C 122 ICYFEQEN----DWWVCKHIKKPIRSTVLSLDWHP--NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELM 195 (372)
T ss_dssp EEEEETTT----TEEEEEEECTTCCSCEEEEEECT--TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEE
T ss_pred EEEecCCC----cceeeeeeecccCCCeeEEEEcC--CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhhe
Confidence 99998752 12333343 45788999999999 999999999999999999752110 1124555
Q ss_pred eeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
..+..+...+. +++|+|++. +|++++.| +.|++||+.+.. ....+. .|..+|+
T Consensus 196 ~~~~~~~~~v~----------~~~~~~~~~-----~l~~~~~d-----~~i~i~d~~~~~----~~~~~~---~~~~~v~ 248 (372)
T 1k8k_C 196 FESSSSCGWVH----------GVCFSANGS-----RVAWVSHD-----STVCLADADKKM----AVATLA---SETLPLL 248 (372)
T ss_dssp EECCCCSSCEE----------EEEECSSSS-----EEEEEETT-----TEEEEEEGGGTT----EEEEEE---CSSCCEE
T ss_pred EecCCCCCeEE----------EEEECCCCC-----EEEEEeCC-----CEEEEEECCCCc----eeEEEc---cCCCCeE
Confidence 55656655555 999999987 89999998 999999998764 333344 4667999
Q ss_pred EEEEecCC
Q 026295 231 AVAWALNI 238 (240)
Q Consensus 231 ~v~~sp~~ 238 (240)
+++|+|++
T Consensus 249 ~~~~~~~~ 256 (372)
T 1k8k_C 249 AVTFITES 256 (372)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99999986
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.4e-28 Score=196.17 Aligned_cols=192 Identities=16% Similarity=0.190 Sum_probs=151.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
..+....|++++++|++|+.|+.|+|||+. ..+....+.+|...|.+++|+|+ +.+|++++.|+.|++||+..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSN-----FNLQREIDQAHVSEITKLKFFPS--GEALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTT-----SCEEEEETTSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCC-----CcceeeecccccCccEEEEECCC--CCEEEEEeCCCeEEEEeCCC
Confidence 344555789999999999999999999998 55777777899999999999999 99999999999999999976
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc---ceeecc---
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI---DSVTMF--- 163 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~v~~~--- 163 (240)
+ +.+..+..|...|.+++|+| ++.+|++++.|++|++||+++ .+....+..+. ..+...
T Consensus 171 ~-------~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~------~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 171 G-------SNPRTLIGHRATVTDIAIID--RGRNVLSASLDGTIRLWECGT------GTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp C-------CCCEEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEETTT------TEEEEEECBTTBTTCCEEEEEEE
T ss_pred C-------cCceEEcCCCCcEEEEEEcC--CCCEEEEEcCCCcEEEeECCC------CceeEEeecCCCCCCCccEEEEe
Confidence 6 67778889999999999999 999999999999999999987 45555554321 111100
Q ss_pred --------ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe
Q 026295 164 --------RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 164 --------~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 235 (240)
......+.+++|+|++. +|++|+.| +.|++||+++.... ..+ ..+|...|++++|+
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~~~d-----g~i~i~d~~~~~~~----~~~--~~~~~~~v~~~~~~ 299 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGK-----YVIAGHVS-----GVITVHNVFSKEQT----IQL--PSKFTCSCNSLTVD 299 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTE-----EEEEEETT-----SCEEEEETTTCCEE----EEE--CCTTSSCEEEEEEC
T ss_pred cCCcceeeecccCcccceEEcCCCC-----EEEEEcCC-----CeEEEEECCCCcee----EEc--ccccCCCceeEEEe
Confidence 00012334667778776 89999998 99999999775422 111 23577899999999
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
|++.
T Consensus 300 ~~~~ 303 (420)
T 3vl1_A 300 GNNA 303 (420)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 9975
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=2.5e-27 Score=184.44 Aligned_cols=184 Identities=18% Similarity=0.254 Sum_probs=155.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWE 86 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd 86 (240)
.|...|.+++|+|++++|++++.|+.|++|++... .......+..|...|.+++|+|+ ++++++++.|+.|++||
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d 169 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---TPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWD 169 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---CcceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEe
Confidence 68889999999999999999999999999999843 33466777889999999999999 99999999999999999
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (240)
++.+ +.+..+..|...+.+++|+| ++.+|++++.||.|++||+++ .+....+. +...+.
T Consensus 170 ~~~~-------~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~~~d~~~------~~~~~~~~-~~~~v~----- 228 (337)
T 1gxr_A 170 LHNQ-------TLVRQFQGHTDGASCIDISN--DGTKLWTGGLDNTVRSWDLRE------GRQLQQHD-FTSQIF----- 228 (337)
T ss_dssp TTTT-------EEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTT------TEEEEEEE-CSSCEE-----
T ss_pred CCCC-------ceeeeeecccCceEEEEECC--CCCEEEEEecCCcEEEEECCC------CceEeeec-CCCceE-----
Confidence 9776 78888888999999999999 999999999999999999987 34444432 333344
Q ss_pred cceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 167 SCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 167 ~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++++.+ +.|++|++.+... ..+. .|...|++++|+|++.
T Consensus 229 -----~~~~s~~~~-----~l~~~~~~-----~~i~~~~~~~~~~-----~~~~---~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 229 -----SLGYCPTGE-----WLAVGMES-----SNVEVLHVNKPDK-----YQLH---LHESCVLSLKFAYCGK 278 (337)
T ss_dssp -----EEEECTTSS-----EEEEEETT-----SCEEEEETTSSCE-----EEEC---CCSSCEEEEEECTTSS
T ss_pred -----EEEECCCCC-----EEEEEcCC-----CcEEEEECCCCCe-----EEEc---CCccceeEEEECCCCC
Confidence 899999987 89999998 9999999977541 1222 4777999999999874
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.6e-27 Score=185.49 Aligned_cols=188 Identities=14% Similarity=0.257 Sum_probs=154.6
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
..|.+.|++++|+|++++|++++ ||.|++|++..... ...+..+. .|...|.+++|+|+ ++++++++.|+.|+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPD--GCTLIVGGEASTLS 122 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTT--SSEEEEEESSSEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCC--CCEEEEEcCCCcEE
Confidence 46899999999999999999999 99999999975421 11222333 78899999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||+..+.. .....+..+...|.+++|+| ++.++++++.||.|++||+++ .+....+..+...+.
T Consensus 123 ~~d~~~~~~-----~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~~~d~~~------~~~~~~~~~~~~~i~-- 187 (337)
T 1gxr_A 123 IWDLAAPTP-----RIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLHN------QTLVRQFQGHTDGAS-- 187 (337)
T ss_dssp EEECCCC-------EEEEEEECSSSCEEEEEECT--TSSEEEEEETTSCEEEEETTT------TEEEEEECCCSSCEE--
T ss_pred EEECCCCCc-----ceeeecccCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCC------CceeeeeecccCceE--
Confidence 999987521 36677778889999999999 999999999999999999987 566667777766666
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++++.| +.|++||+++... ...+ .|...+.+++|+|++.
T Consensus 188 --------~~~~~~~~~-----~l~~~~~d-----g~i~~~d~~~~~~----~~~~----~~~~~v~~~~~s~~~~ 237 (337)
T 1gxr_A 188 --------CIDISNDGT-----KLWTGGLD-----NTVRSWDLREGRQ----LQQH----DFTSQIFSLGYCPTGE 237 (337)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----SEEEEEETTTTEE----EEEE----ECSSCEEEEEECTTSS
T ss_pred --------EEEECCCCC-----EEEEEecC-----CcEEEEECCCCce----Eeee----cCCCceEEEEECCCCC
Confidence 999999887 89999998 9999999977542 2222 2556899999999874
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.5e-27 Score=190.93 Aligned_cols=182 Identities=15% Similarity=0.258 Sum_probs=153.8
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
|...|.+++|+|++++|++|+.||.|++||+. +.+.+..+.+|...|.+++| + +.++++++.|+.|++||+
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-----SQTKLRTMAGHQARVGCLSW--N--RHVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----TCCEEEEECCCSSCEEEEEE--E--TTEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECc-----CCeEEEEecCCCCceEEEEE--C--CCEEEEEcCCCCEEEEec
Confidence 78899999999999999999999999999998 55678888899999999999 4 678999999999999999
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
+... .....+..|...|.+++|+| ++.+|++++.||.|++||+++ .+....+..+...+.
T Consensus 204 ~~~~------~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~------~~~~~~~~~~~~~v~------ 263 (401)
T 4aez_A 204 RIAN------HQIGTLQGHSSEVCGLAWRS--DGLQLASGGNDNVVQIWDARS------SIPKFTKTNHNAAVK------ 263 (401)
T ss_dssp TSSS------CEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTC------SSEEEEECCCSSCCC------
T ss_pred ccCc------ceeeEEcCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEccCCC------CCccEEecCCcceEE------
Confidence 7432 67788888999999999999 999999999999999999987 456666666766666
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEe--cCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 168 CISASISWNPQKGENQGSSFVLGF--NSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~--~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++.. ++++++ .| +.|++||+.++.. ...+. |...|++++|+|++.
T Consensus 264 ----~~~~~p~~~~----ll~~~~gs~d-----~~i~i~d~~~~~~----~~~~~----~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 264 ----AVAWCPWQSN----LLATGGGTMD-----KQIHFWNAATGAR----VNTVD----AGSQVTSLIWSPHSK 316 (401)
T ss_dssp ----EEEECTTSTT----EEEEECCTTT-----CEEEEEETTTCCE----EEEEE----CSSCEEEEEECSSSS
T ss_pred ----EEEECCCCCC----EEEEecCCCC-----CEEEEEECCCCCE----EEEEe----CCCcEEEEEECCCCC
Confidence 9999998752 777765 56 9999999987542 23332 455899999999874
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.3e-27 Score=191.92 Aligned_cols=186 Identities=16% Similarity=0.239 Sum_probs=147.4
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|.+.|++++|+|++++|++|+.|+.|++||+. +.+.+..+.+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK-----DGSNPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRL 207 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TCCCCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC-----CCcCceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEE
Confidence 56899999999999999999999999999999998 44567788899999999999999 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeee---ccccE---------------------EeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 85 WEEIVEDAQPLQWKLCKSFES---TSTQV---------------------LDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~---~~~~v---------------------~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
||++.+ +.+..+.. +...+ .+++|+| ++.+|++++.||.|++||+++
T Consensus 208 wd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 208 WECGTG-------TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT--YGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTTT-------EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC--TTEEEEEEETTSCEEEEETTT
T ss_pred eECCCC-------ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC--CCCEEEEEcCCCeEEEEECCC
Confidence 999776 66666653 33344 4455566 889999999999999999987
Q ss_pred cccccceeEEeeee-cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEee
Q 026295 141 PLILKNWQLQAEFQ-NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAEL 219 (240)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~ 219 (240)
.+....+. .+...+. +++|+|++.. +|++|+.| +.|++||+++.... ...+
T Consensus 279 ------~~~~~~~~~~~~~~v~----------~~~~~~~~~~----~l~~g~~d-----g~i~vwd~~~~~~~---~~~~ 330 (420)
T 3vl1_A 279 ------KEQTIQLPSKFTCSCN----------SLTVDGNNAN----YIYAGYEN-----GMLAQWDLRSPECP---VGEF 330 (420)
T ss_dssp ------CCEEEEECCTTSSCEE----------EEEECSSCTT----EEEEEETT-----SEEEEEETTCTTSC---SEEE
T ss_pred ------CceeEEcccccCCCce----------eEEEeCCCCC----EEEEEeCC-----CeEEEEEcCCCcCc---hhhh
Confidence 33333332 3444454 9999999753 79999998 99999999876542 2222
Q ss_pred ecCCCCCCceEEEEEec
Q 026295 220 ALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 220 ~~~~~h~~~v~~v~~sp 236 (240)
.. .|...|+++.|.+
T Consensus 331 ~~--~~~~~v~~~~~~~ 345 (420)
T 3vl1_A 331 LI--NEGTPINNVYFAA 345 (420)
T ss_dssp EE--STTSCEEEEEEET
T ss_pred hc--cCCCCceEEEeCC
Confidence 22 2666899986653
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8e-29 Score=204.01 Aligned_cols=162 Identities=14% Similarity=0.125 Sum_probs=133.1
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEE--EEcCCCCC-CEEEEEecCC
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKV--VWVPPEFG-DAVACICSDG 80 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~-~~l~s~~~d~ 80 (240)
.+..|...|++++|++++ +|++|+.||+|++||+.... .+...+.+|...|.+| .|+|+ + .+|++++.|+
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~----~~~~~~~~H~~~V~sv~~~~s~~--g~~~laS~S~D~ 333 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE----VPSFYDQVHDSYILSVSTAYSDF--EDTVVSTVAVDG 333 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS----SCSEEEECSSSCEEEEEEECCTT--SCCEEEEEETTS
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC----CceEEeecccccEEEEEEEcCCC--CCeEEEEeccCC
Confidence 356788999999999864 89999999999999997321 2344578899999999 56776 7 8999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccc--cEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTST--QVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
+|+|||++.. +++..+.+|.. .|.+++|+| ++..+++++.|++|++||++. ..+...+..|..
T Consensus 334 tvklWD~~~~-------~~~~~~~~~~~~~~v~~v~fsp--~~~~l~s~~~d~tv~lwd~~~------~~~~~~l~gH~~ 398 (524)
T 2j04_B 334 YFYIFNPKDI-------ATTKTTVSRFRGSNLVPVVYCP--QIYSYIYSDGASSLRAVPSRA------AFAVHPLVSRET 398 (524)
T ss_dssp EEEEECGGGH-------HHHCEEEEECSCCSCCCEEEET--TTTEEEEECSSSEEEEEETTC------TTCCEEEEECSS
T ss_pred eEEEEECCCC-------CcccccccccccCcccceEeCC--CcCeEEEeCCCCcEEEEECcc------cccceeeecCCC
Confidence 9999999765 44445555542 478999999 899999999999999999987 344456667777
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEee
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFD 207 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~ 207 (240)
.|. +|+|+|++. +|++|+.| ++|+||++.
T Consensus 399 ~V~----------sva~Sp~g~-----~l~Sgs~D-----gtv~lwd~~ 427 (524)
T 2j04_B 399 TIT----------AIGVSRLHP-----MVLAGSAD-----GSLIITNAA 427 (524)
T ss_dssp CEE----------EEECCSSCC-----BCEEEETT-----TEEECCBSC
T ss_pred ceE----------EEEeCCCCC-----eEEEEECC-----CEEEEEech
Confidence 776 999999987 89999999 999999864
No 64
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.5e-28 Score=196.36 Aligned_cols=206 Identities=10% Similarity=0.026 Sum_probs=136.6
Q ss_pred hhcccccceEEEEECC--------CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCC-CEEE
Q 026295 4 AVATLDKGTTSSSWNY--------CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFG-DAVA 74 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~--------~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~ 74 (240)
.+.+|.+.|++++|+| ++++||+|+.|++|+|||+. +..++..+..|...|.+++|+|+ + .+|+
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~-----~~~~~~~~~~~~~~v~~v~~~p~--~~~~l~ 203 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT-----DEGPILAGYPLSSPGISVQFRPS--NPNQLI 203 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE-----TTEEEEEEEECSSCEEEEEEETT--EEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC-----CCceeeeecCCCCCcEEEEECCC--CCceEE
Confidence 4678999999999998 78999999999999999997 44566777789999999999998 6 5899
Q ss_pred EEecCCeEEEEEeeeccCCC---------cccE---------EEEEeeeccccEEeEEEe-ecCCCcEEEEEeCCCcEEE
Q 026295 75 CICSDGSLLLWEEIVEDAQP---------LQWK---------LCKSFESTSTQVLDVQFG-VSSTSLKLVAAYSDGHVKV 135 (240)
Q Consensus 75 s~~~d~~v~iwd~~~~~~~~---------~~~~---------~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~dg~v~i 135 (240)
+++.|++|++||++.+.... ..|. ......++...+.++.|+ | ++..+++++.|+++++
T Consensus 204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~--dg~~l~s~s~d~~i~v 281 (393)
T 4gq1_A 204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS--DGSGILAMCKSGAWLR 281 (393)
T ss_dssp EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT--TTCEEEEECTTSEEEE
T ss_pred ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC--CCCEEEEEeCCCCEEE
Confidence 99999999999987652100 0000 011123466788899997 5 8899999999999999
Q ss_pred EEecCcccccceeEEeeeecccceee-----cccc---ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEee
Q 026295 136 YELLDPLILKNWQLQAEFQNAIDSVT-----MFRK---ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFD 207 (240)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~---~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~ 207 (240)
||+... .....+..+...+. +... .........|+|... +.++++|+.| +.|+|||..
T Consensus 282 wd~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~sgs~D-----g~V~lwd~~ 347 (393)
T 4gq1_A 282 WNLFAN------NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM---DYFATAHSQH-----GLIQLINTY 347 (393)
T ss_dssp EEC-------------------------CCSCSEEEECSSCCSSCCEECSSCT---TEEEEEETTT-----TEEEEEETT
T ss_pred EECccC------CCCceEeeecCccccEEEccccccccccCcceeEEEccCCC---CEEEEEECCC-----CEEEEEECC
Confidence 999763 22222222211111 0000 000111344555443 3355566666 999999998
Q ss_pred cCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 208 EAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 208 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
++...... . +|..+|++|+||||+.
T Consensus 348 ~~~~~~~~----~---~~~~~V~svafspdG~ 372 (393)
T 4gq1_A 348 EKDSNSIP----I---QLGMPIVDFCWHQDGS 372 (393)
T ss_dssp CTTCCEEE----E---ECSSCEEEEEECTTSS
T ss_pred CCcEEEEe----c---CCCCcEEEEEEcCCCC
Confidence 76543222 2 3667999999999984
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=3.1e-27 Score=212.58 Aligned_cols=165 Identities=20% Similarity=0.319 Sum_probs=149.6
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+.+|.+.|++++|+|+|++|++|+.||+|+|||+. +.+.+..+.+|.+.|.+++|+|+ +.++++++.|+.|++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~-----~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE-----TGEKLLDIKAHEDEVLCCAFSSD--DSYIATCSADKKVKI 683 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----TCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECC-----CCCEEEEeccCCCCEEEEEEecC--CCEEEEEeCCCeEEE
Confidence 45799999999999999999999999999999998 66788889999999999999999 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
||+.++ +.+..+..|...|.+++|+|..++.++++++.|+.|++||+.+ ..+...+..|...+.
T Consensus 684 wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~------~~~~~~~~~h~~~v~--- 747 (1249)
T 3sfz_A 684 WDSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ------KECRNTMFGHTNSVN--- 747 (1249)
T ss_dssp EETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS------SSEEEEECCCSSCEE---
T ss_pred EECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC------cchhheecCCCCCEE---
Confidence 999876 8889999999999999999855566899999999999999987 566777777777776
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
+++|+|++. +|++++.| +.|++||+.+.
T Consensus 748 -------~~~~sp~~~-----~l~s~s~d-----g~v~vwd~~~~ 775 (1249)
T 3sfz_A 748 -------HCRFSPDDE-----LLASCSAD-----GTLRLWDVRSA 775 (1249)
T ss_dssp -------EEEECSSTT-----EEEEEESS-----SEEEEEEGGGT
T ss_pred -------EEEEecCCC-----EEEEEECC-----CeEEEEeCCCC
Confidence 999999987 89999999 99999998765
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=3.6e-27 Score=188.70 Aligned_cols=191 Identities=14% Similarity=0.164 Sum_probs=151.4
Q ss_pred hhcccccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe--eecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 4 AVATLDKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKT--KVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
.+..|...|.+++|+|++ ++|++++.|+.|+|||+. +.+.+..+ ..|...|.+++|+|+ +.+|++++.|+
T Consensus 126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-----~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 198 (402)
T 2aq5_A 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-----TGAAVLTLGPDVHPDTIYSVDWSRD--GALICTSCRDK 198 (402)
T ss_dssp EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT-----TTEEEEEECTTTCCSCEEEEEECTT--SSCEEEEETTS
T ss_pred EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-----CCCccEEEecCCCCCceEEEEECCC--CCEEEEEecCC
Confidence 366799999999999998 699999999999999998 55777788 789999999999999 99999999999
Q ss_pred eEEEEEeeeccCCCcccEEEEEe-eecccc-EEeEEEeecCCCcEEEEE---eCCCcEEEEEecCcccccceeEEeeee-
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSF-ESTSTQ-VLDVQFGVSSTSLKLVAA---YSDGHVKVYELLDPLILKNWQLQAEFQ- 154 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~---~~dg~v~iw~~~~~~~~~~~~~~~~~~- 154 (240)
.|++||++.+ +.+..+ ..|... +..+.|+| ++.+|+++ +.|+.|++||++.... ......
T Consensus 199 ~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~g~~~~~d~~i~iwd~~~~~~-----~~~~~~~ 264 (402)
T 2aq5_A 199 RVRVIEPRKG-------TVVAEKDRPHEGTRPVHAVFVS--EGKILTTGFSRMSERQVALWDTKHLEE-----PLSLQEL 264 (402)
T ss_dssp EEEEEETTTT-------EEEEEEECSSCSSSCCEEEECS--TTEEEEEEECTTCCEEEEEEETTBCSS-----CSEEEEC
T ss_pred cEEEEeCCCC-------ceeeeeccCCCCCcceEEEEcC--CCcEEEEeccCCCCceEEEEcCccccC-----CceEEec
Confidence 9999999876 777777 566655 89999999 99999998 7899999999986321 111111
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEe-cCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGF-NSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~-~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
.+...+. +++|+|++. +|++++ .| +.|++|++.+...... .+..+. |...|++++
T Consensus 265 ~~~~~v~----------~~~~s~~~~-----~l~~~g~~d-----g~i~i~d~~~~~~~~~---~l~~~~-~~~~v~~~~ 320 (402)
T 2aq5_A 265 DTSSGVL----------LPFFDPDTN-----IVYLCGKGD-----SSIRYFEITSEAPFLH---YLSMFS-SKESQRGMG 320 (402)
T ss_dssp CCCSSCE----------EEEEETTTT-----EEEEEETTC-----SCEEEEEECSSTTCEE---EEEEEC-CSSCCSEEE
T ss_pred cCCCcee----------EEEEcCCCC-----EEEEEEcCC-----CeEEEEEecCCCcceE---eecccc-cCCcccceE
Confidence 2223333 899999987 676554 56 9999999987653222 223333 667999999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+|++.
T Consensus 321 ~sp~~~ 326 (402)
T 2aq5_A 321 YMPKRG 326 (402)
T ss_dssp ECCGGG
T ss_pred Eecccc
Confidence 999864
No 67
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=3.1e-27 Score=190.83 Aligned_cols=204 Identities=16% Similarity=0.272 Sum_probs=158.2
Q ss_pred hcccccceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCC--cEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 5 VATLDKGTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSS--SFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
+..|...|.+++|+|+++ +|++|+.||.|++|++...... .......+..|...|.+++|+|. .+.+|++++.|+.
T Consensus 177 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQK 255 (430)
T ss_dssp EECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTSE
T ss_pred ecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCCe
Confidence 567899999999999998 9999999999999999853211 12234566789999999999994 1789999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
|++||++.... ..++..+..|...|++++|+| ++. ++++++.||.|++||++.. ...+..+..|...+
T Consensus 256 i~i~d~~~~~~----~~~~~~~~~~~~~v~~i~~~p--~~~~~l~tg~~dg~v~vwd~~~~-----~~~~~~~~~h~~~v 324 (430)
T 2xyi_A 256 LMIWDTRNNNT----SKPSHTVDAHTAEVNCLSFNP--YSEFILATGSADKTVALWDLRNL-----KLKLHSFESHKDEI 324 (430)
T ss_dssp EEEEETTCSCS----SSCSEEEECCSSCEEEEEECS--SCTTEEEEEETTSEEEEEETTCT-----TSCSEEEECCSSCE
T ss_pred EEEEECCCCCC----CcceeEeecCCCCeEEEEeCC--CCCCEEEEEeCCCeEEEEeCCCC-----CCCeEEeecCCCCE
Confidence 99999986421 135566678889999999999 776 6889999999999999863 23455666666666
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcc-------eeEeeecCCCCCCceEEEE
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWL-------PVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~-------~~~~~~~~~~h~~~v~~v~ 233 (240)
. +++|+|++.. +|++++.| +.|+|||+........ ....+..+.+|...|++++
T Consensus 325 ~----------~i~~sp~~~~----~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 325 F----------QVQWSPHNET----ILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp E----------EEEECSSCTT----EEEEEETT-----SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred E----------EEEECCCCCC----EEEEEeCC-----CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 6 9999999842 78999998 9999999987432210 0012234457888999999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+|++.
T Consensus 386 ~~p~~~ 391 (430)
T 2xyi_A 386 WNPNEP 391 (430)
T ss_dssp ECSSST
T ss_pred ECCCCC
Confidence 999874
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=7.4e-27 Score=185.58 Aligned_cols=172 Identities=16% Similarity=0.051 Sum_probs=139.5
Q ss_pred cccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 6 ATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 6 ~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
..|.+.|.+++|+| ++++|++++.|+.|++||+... ..........|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLL 189 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEE
Confidence 35899999999999 7899999999999999999842 22233333345588999999999 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
||++ + +++..+..|...|.+++|+| ++. +|++++.|+.|++||+++.... ..+...+ .+...+.
T Consensus 190 ~d~~-~-------~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~-~~~~~v~-- 254 (383)
T 3ei3_B 190 LGLD-G-------HEIFKEKLHKAKVTHAEFNP--RCDWLMATSSVDATVKLWDLRNIKDK--NSYIAEM-PHEKPVN-- 254 (383)
T ss_dssp EETT-S-------CEEEEEECSSSCEEEEEECS--SCTTEEEEEETTSEEEEEEGGGCCST--TCEEEEE-ECSSCEE--
T ss_pred EECC-C-------CEEEEeccCCCcEEEEEECC--CCCCEEEEEeCCCEEEEEeCCCCCcc--cceEEEe-cCCCceE--
Confidence 9994 3 67888889999999999999 888 8999999999999999863221 2333333 4555555
Q ss_pred ccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 164 RKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 164 ~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
+++|+| ++. +|++++.| +.|++||+.+.......
T Consensus 255 --------~~~~s~~~~~-----~l~~~~~d-----~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 255 --------AAYFNPTDST-----KLLTTDQR-----NEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp --------EEEECTTTSC-----EEEEEESS-----SEEEEEETTBTTSCSEE
T ss_pred --------EEEEcCCCCC-----EEEEEcCC-----CcEEEEECCCCcccccc
Confidence 999999 877 89999998 99999999887654333
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.2e-27 Score=193.22 Aligned_cols=204 Identities=13% Similarity=0.223 Sum_probs=156.2
Q ss_pred hcccccceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCC-----CcEEEEeEeeecCccEEEEEEcCCCCCC-EEEEEe
Q 026295 5 VATLDKGTTSSSWNYC-GQRLATGSTDGTLSIFDSPDPSS-----SSFTCNLKTKVHAGAILKVVWVPPEFGD-AVACIC 77 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~ 77 (240)
...|.+.|++++|+|+ +.+||+++.||.|+||++..... +....+..+.+|...|.+++|+|. +. +|++++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 201 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSAS 201 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEEC
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEe
Confidence 4568999999999997 68999999999999999974100 024567778899999999999998 77 999999
Q ss_pred cCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc
Q 026295 78 SDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 78 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
.||.|++|++...............+..|...|.+++|+|. ++.+|++++.||.|++||+++... ......+..|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg~i~i~d~~~~~~---~~~~~~~~~~~ 277 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQKLMIWDTRNNNT---SKPSHTVDAHT 277 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEETTCSCS---SSCSEEEECCS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCCeEEEEECCCCCC---CcceeEeecCC
Confidence 99999999997632111112234566788899999999883 456789999999999999986311 13344445565
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
..+. +++|+|++.. +|++|+.| +.|++||++..... ...+. +|...|++++|+|+
T Consensus 278 ~~v~----------~i~~~p~~~~----~l~tg~~d-----g~v~vwd~~~~~~~---~~~~~---~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 278 AEVN----------CLSFNPYSEF----ILATGSAD-----KTVALWDLRNLKLK---LHSFE---SHKDEIFQVQWSPH 332 (430)
T ss_dssp SCEE----------EEEECSSCTT----EEEEEETT-----SEEEEEETTCTTSC---SEEEE---CCSSCEEEEEECSS
T ss_pred CCeE----------EEEeCCCCCC----EEEEEeCC-----CeEEEEeCCCCCCC---eEEee---cCCCCEEEEEECCC
Confidence 5555 9999998752 78899998 99999999874322 23333 47779999999998
Q ss_pred CC
Q 026295 238 IG 239 (240)
Q Consensus 238 ~~ 239 (240)
+.
T Consensus 333 ~~ 334 (430)
T 2xyi_A 333 NE 334 (430)
T ss_dssp CT
T ss_pred CC
Confidence 73
No 70
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.2e-27 Score=201.12 Aligned_cols=204 Identities=19% Similarity=0.336 Sum_probs=163.6
Q ss_pred hhcccccceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 4 AVATLDKGTTSSSWNYC--GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.+..|.+.|++++|+++ +++|++|+.||.|++||+... ....+..+.+|...|.+++|+|+..+.++++++.||.
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~---~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC---cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 46679999999999988 999999999999999999843 3447778889999999999998633689999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC-----------CCcEEEEEeCCCcEEEEEecCcccccceeEE
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS-----------TSLKLVAAYSDGHVKVYELLDPLILKNWQLQ 150 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 150 (240)
|++||+..... .....+..|...|.+++|+|.. ++.++++++.||.|++||++..... ..+.
T Consensus 125 I~vwdl~~~~~-----~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~--~~~~ 197 (753)
T 3jro_A 125 VSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--YVLE 197 (753)
T ss_dssp EEEEECCSSSC-----CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE--EEEE
T ss_pred EEEEEeecCCC-----cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc--ceee
Confidence 99999976532 3344566788999999999821 3788999999999999999874222 3556
Q ss_pred eeeecccceeeccccccceeeeEEEeCC---CCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQ---KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD 227 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~---~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 227 (240)
..+..|...+. +++|+|+ +. +|++|+.| +.|++||+.+....... .+....+|..
T Consensus 198 ~~~~~h~~~V~----------~l~~sp~~~~~~-----~l~s~s~D-----g~I~iwd~~~~~~~~~~--~~~~~~~~~~ 255 (753)
T 3jro_A 198 STLEGHSDWVR----------DVAWSPTVLLRS-----YLASVSQD-----RTCIIWTQDNEQGPWKK--TLLKEEKFPD 255 (753)
T ss_dssp EEECCCSSCEE----------EEEECCCCSSSE-----EEEEEESS-----SCEEEEEESSSSSCCBC--CBSSSSCCSS
T ss_pred eeecCCCCcEE----------EEEeccCCCCCC-----EEEEEecC-----CEEEEecCCCCCCccee--EEeccCCCCC
Confidence 66677777776 9999999 55 89999999 99999999886533221 1223345888
Q ss_pred ceEEEEEecCCC
Q 026295 228 EVYAVAWALNIG 239 (240)
Q Consensus 228 ~v~~v~~sp~~~ 239 (240)
.|++++|+|++.
T Consensus 256 ~v~~l~~spdg~ 267 (753)
T 3jro_A 256 VLWRASWSLSGN 267 (753)
T ss_dssp CCCCEEECTTTC
T ss_pred ceEEEEEcCCCC
Confidence 999999999975
No 71
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.9e-27 Score=191.62 Aligned_cols=185 Identities=13% Similarity=0.088 Sum_probs=142.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc-----cEEEEEEcCCCCCCEEEEEecCCe
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG-----AILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.|++.|.+++|||+|++||+++.||.|+||+.. . ++..+. |.. .|.+++|+|+ |++|++++.||+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-----~--~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGt 152 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-----K--MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGE 152 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT-----E--EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC-----c--eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCE
Confidence 467889999999999999999999999999965 2 566666 665 4999999999 999999999999
Q ss_pred EEEEEeeeccCCCcccEEEEEe----eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeee-cc
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSF----ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQ-NA 156 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~ 156 (240)
|++||+..+.-.++.+-.+.++ .+|...|.+++|+| +| +++++.|++|++|++..... .+....+. .|
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP--dg--Laass~D~tVrlWd~~~~~~---~~~~~tL~~~h 225 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE--DV--LVAALSNNSVFSMTVSASSH---QPVSRMIQNAS 225 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET--TE--EEEEETTCCEEEECCCSSSS---CCCEEEEECCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcC--Cc--EEEEeCCCeEEEEECCCCcc---ccceeeecccc
Confidence 9999998652111222356776 45678999999999 88 88899999999999976310 01223443 45
Q ss_pred cceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEE--
Q 026295 157 IDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAW-- 234 (240)
Q Consensus 157 ~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-- 234 (240)
...|. +++|+ +. +||+++ + +.|++|++.+.... .+. . +|.+.|++++|
T Consensus 226 ~~~V~----------svaFs--g~-----~LASa~-~-----~tIkLWd~~~~~~~-----~~~-~-gh~~~V~~va~~~ 275 (588)
T 2j04_A 226 RRKIT----------DLKIV--DY-----KVVLTC-P-----GYVHKIDLKNYSIS-----SLK-T-GSLENFHIIPLNH 275 (588)
T ss_dssp SSCCC----------CEEEE--TT-----EEEEEC-S-----SEEEEEETTTTEEE-----EEE-C-SCCSCCCEEEETT
T ss_pred cCcEE----------EEEEE--CC-----EEEEEe-C-----CeEEEEECCCCeEE-----EEE-c-CCCceEEEEEeee
Confidence 55565 99999 34 788887 5 99999998764321 111 1 58889999999
Q ss_pred ecCC
Q 026295 235 ALNI 238 (240)
Q Consensus 235 sp~~ 238 (240)
+||+
T Consensus 276 s~d~ 279 (588)
T 2j04_A 276 EKES 279 (588)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 9986
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-26 Score=185.32 Aligned_cols=195 Identities=14% Similarity=0.187 Sum_probs=156.7
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCC---------------------------------------
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSS--------------------------------------- 44 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--------------------------------------- 44 (240)
.+..|...|.+++|+|++++|++++.|+.|++||+......
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (425)
T 1r5m_A 144 VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIP 223 (425)
T ss_dssp EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEE
T ss_pred eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEE
Confidence 46678999999999999999999999999999998632100
Q ss_pred ------------cEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEe
Q 026295 45 ------------SFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLD 112 (240)
Q Consensus 45 ------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 112 (240)
..+.+..+..|...|.+++|+|+ +.+|++++.|+.|++||+... +.+..+..+...|.+
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT--NKLLLSASDDGTLRIWHGGNG-------NSQNCFYGHSQSIVS 294 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT--TTEEEEEETTSCEEEECSSSB-------SCSEEECCCSSCEEE
T ss_pred cCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCC-------ccceEecCCCccEEE
Confidence 00112234568889999999999 999999999999999999876 667777888899999
Q ss_pred EEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEec
Q 026295 113 VQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFN 192 (240)
Q Consensus 113 ~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~ 192 (240)
++|+| ++ ++++++.|+.|++||+++ .+....+..+...+. +++|+|++. +|++++.
T Consensus 295 ~~~~~--~~-~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~i~----------~~~~s~~~~-----~l~~~~~ 350 (425)
T 1r5m_A 295 ASWVG--DD-KVISCSMDGSVRLWSLKQ------NTLLALSIVDGVPIF----------AGRISQDGQ-----KYAVAFM 350 (425)
T ss_dssp EEEET--TT-EEEEEETTSEEEEEETTT------TEEEEEEECTTCCEE----------EEEECTTSS-----EEEEEET
T ss_pred EEECC--CC-EEEEEeCCCcEEEEECCC------CcEeEecccCCccEE----------EEEEcCCCC-----EEEEEEC
Confidence 99999 88 899999999999999987 566667777666666 999999987 8999999
Q ss_pred CCCCCCCeEEEEEeecCCCCc----------------ceeEeeecCCCCCC--ceEEEEEecCCC
Q 026295 193 SDTPQLNSSKVWEFDEAHNRW----------------LPVAELALPEDRSD--EVYAVAWALNIG 239 (240)
Q Consensus 193 dd~~~~~~i~iw~~~~~~~~~----------------~~~~~~~~~~~h~~--~v~~v~~sp~~~ 239 (240)
| +.|++|++.+..... ..... ..+|.. .|++++|+|++.
T Consensus 351 d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 351 D-----GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS---YQSSQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp T-----SCEEEEECHHHHC--------------CEECCEEEE---ECCTTCCCCEEEEEECTTSS
T ss_pred C-----CeEEEEECCCCccceeeeecccccccCcccchhhhh---hcCcccCCceEEEEccCCCc
Confidence 8 999999997654110 02233 335755 999999999974
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=6e-26 Score=182.72 Aligned_cols=199 Identities=16% Similarity=0.240 Sum_probs=147.7
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|.+.|++++|+|+|++||+|+.||.|+|||+. +.+++..+.+|...+.++.| + +.++++++.|+.+++
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-----~~~~~~~~~~h~~~v~~~s~--~--~~~l~sgs~d~~i~~ 213 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----QQKRLRNMTSHSARVGSLSW--N--SYILSSGSRSGHIHH 213 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEE--E--TTEEEEEETTSEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-----CCcEEEEEeCCCCceEEEee--C--CCEEEEEeCCCceeE
Confidence 34577889999999999999999999999999998 66888999999999999887 3 678999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee---
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT--- 161 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~--- 161 (240)
||..... ..+..+..|...+..+.|+| ++.++++++.|+.|++|+........ ........+...+.
T Consensus 214 ~d~~~~~------~~~~~~~~h~~~~~~~~~~~--~g~~l~s~~~D~~v~i~~~~~~~~~~--~~~~~~~~~~~~V~~~~ 283 (420)
T 4gga_A 214 HDVRVAE------HHVATLSGHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGW--VPLQTFTQHQGAVKAVA 283 (420)
T ss_dssp EETTSSS------CEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEESSCCSSCS--CCSEEECCCSSCEEEEE
T ss_pred eeecccc------eeeEEecccccceeeeeecC--CCCeeeeeeccccceEEeeccccccc--eeeeeecccCCceeeee
Confidence 9987542 56778889999999999999 99999999999999999987532211 11111111111111
Q ss_pred --cc---------c--------------------cccceeeeEEEeCCCCCCCCceEEEEe--cCCCCCCCeEEEEEeec
Q 026295 162 --MF---------R--------------------KASCISASISWNPQKGENQGSSFVLGF--NSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 162 --~~---------~--------------------~~~~~~~~v~~~p~~~~~~~~~l~~~~--~dd~~~~~~i~iw~~~~ 208 (240)
+. + .....+.++.|+|++. .|++++ .| +.|+|||+.+
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~-----~lv~~sg~~d-----~~I~iwd~~~ 353 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK-----ELISGHGFAQ-----NQLVIWKYPT 353 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTT-----EEEEEECTTT-----CCEEEEETTT
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCC-----eEEEEEecCC-----CEEEEEECCC
Confidence 00 0 0011334666777765 454443 45 8888888876
Q ss_pred CCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 209 AHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 209 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.. ....+. +|.+.|++|+|+||+.
T Consensus 354 ~~----~v~~l~---gH~~~V~~l~~spdg~ 377 (420)
T 4gga_A 354 MA----KVAELK---GHTSRVLSLTMSPDGA 377 (420)
T ss_dssp CC----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred Cc----EEEEEc---CCCCCEEEEEEcCCCC
Confidence 43 334444 6888999999999985
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=184.08 Aligned_cols=201 Identities=16% Similarity=0.277 Sum_probs=153.0
Q ss_pred hhcccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCc-EEEEe--E-----eeecCccEEEEEEcC-CCCCCEE
Q 026295 4 AVATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSS-FTCNL--K-----TKVHAGAILKVVWVP-PEFGDAV 73 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~--~-----~~~h~~~v~~~~~~~-~~~~~~l 73 (240)
.+..|.+.|++++|+| ++++|++|+.||.|+||++....... ..... . ..+|...|.+++|+| + +.+|
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l 115 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD--TGMF 115 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC--TTCE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC--CcEE
Confidence 3567999999999999 99999999999999999998542111 11000 0 025899999999999 5 7899
Q ss_pred EEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC-CCcEEEEEeCCCcEEEEEecCcccccceeEEee
Q 026295 74 ACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS-TSLKLVAAYSDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 74 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
++++.|+.|++||+..+ +....+. +...+.++.|+|.. ++.++++++.||.|++||+++ .+....
T Consensus 116 ~s~~~d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~------~~~~~~ 181 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTL-------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS------GSCSHI 181 (408)
T ss_dssp EEEETTSEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS------SCCCEE
T ss_pred EEEeCCCeEEEeeCCCC-------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC------cceeee
Confidence 99999999999999876 6666665 56788999998732 344899999999999999987 455566
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCccee---------EeeecCC
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPV---------AELALPE 223 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~---------~~~~~~~ 223 (240)
+..|...+. +++|+|++.. +|++|+.| +.|++||++......... .......
T Consensus 182 ~~~~~~~v~----------~~~~~~~~~~----ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 182 LQGHRQEIL----------AVSWSPRYDY----ILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp ECCCCSCEE----------EEEECSSCTT----EEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred ecCCCCcEE----------EEEECCCCCc----EEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccc
Confidence 667776666 9999999862 58899998 999999997754221111 0011123
Q ss_pred CCCCceEEEEEecCCC
Q 026295 224 DRSDEVYAVAWALNIG 239 (240)
Q Consensus 224 ~h~~~v~~v~~sp~~~ 239 (240)
+|...|++++|+|++.
T Consensus 243 ~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGL 258 (408)
T ss_dssp SCSSCEEEEEECTTSS
T ss_pred cccCceeEEEEcCCCC
Confidence 5888999999999874
No 75
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=1.2e-27 Score=193.42 Aligned_cols=169 Identities=12% Similarity=0.019 Sum_probs=133.4
Q ss_pred hcccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 5 VATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
+.+|.+.|++++|+| ++++|++|+.||+|+|||+... ..........+...+.+++|+|+ +.+|++++.|+.|+
T Consensus 160 ~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 160 GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN---ILRVFASSDTINIWFCSLDVSAS--SRMVVTGDNVGNVI 234 (435)
T ss_dssp CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC---EEEEEECCSSCSCCCCCEEEETT--TTEEEEECSSSBEE
T ss_pred ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC---ceeEEeccCCCCccEEEEEECCC--CCEEEEEeCCCcEe
Confidence 457999999999998 6899999999999999999732 22222222234456789999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
+||++. +.+..+..|...|.+++|+| ++. +|++++.|++|++||++...... .......|...|.
T Consensus 235 ~wd~~~--------~~~~~~~~h~~~v~~v~~~p--~~~~~~~s~s~d~~v~iwd~~~~~~~~---~~~~~~~h~~~v~- 300 (435)
T 4e54_B 235 LLNMDG--------KELWNLRMHKKKVTHVALNP--CCDWFLATASVDQTVKIWDLRQVRGKA---SFLYSLPHRHPVN- 300 (435)
T ss_dssp EEESSS--------CBCCCSBCCSSCEEEEEECT--TCSSEEEEEETTSBCCEEETTTCCSSS---CCSBCCBCSSCEE-
T ss_pred eeccCc--------ceeEEEecccceEEeeeecC--CCceEEEEecCcceeeEEecccccccc---eEEEeeecccccc-
Confidence 999864 55667888999999999998 665 68899999999999998632211 1112234555555
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCC
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHN 211 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~ 211 (240)
+++|+|++. +|++++.| +.|+|||+.+...
T Consensus 301 ---------~~~~spdg~-----~l~s~~~D-----~~i~iwd~~~~~~ 330 (435)
T 4e54_B 301 ---------AACFSPDGA-----RLLTTDQK-----SEIRVYSASQWDC 330 (435)
T ss_dssp ---------ECCBCTTSS-----EEEEEESS-----SCEEEEESSSSSS
T ss_pred ---------ceeECCCCC-----eeEEEcCC-----CEEEEEECCCCcc
Confidence 899999987 89999999 9999999987653
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=8.9e-27 Score=188.38 Aligned_cols=177 Identities=14% Similarity=0.087 Sum_probs=132.2
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEe-------EeeecCccEEEEEEcCCCCC-CEEEEEe
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNL-------KTKVHAGAILKVVWVPPEFG-DAVACIC 77 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~~~-~~l~s~~ 77 (240)
..|...|.+++|+|++++|++| .|+.|+|||+... .+.+. .+.+|...|.+++|+|+ + .+|++++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~ 246 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEIT----DRSFNIVDIKPANMEELTEVITAAEFHPN--SCNTFVYSS 246 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEE----EEEEEEEECCCSSGGGCCCCEEEEEECSS--CTTEEEEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCC----CceeeeeecccccccccCcceEEEEECCC--CCcEEEEEe
Confidence 5799999999999999999999 7999999999821 22333 35589999999999998 8 8999999
Q ss_pred cCCeEEEEEeeeccCCCcccEEEEEeeeccc------------cEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccc
Q 026295 78 SDGSLLLWEEIVEDAQPLQWKLCKSFESTST------------QVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILK 145 (240)
Q Consensus 78 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~ 145 (240)
.|+.|++||++.+... ......+..+.. .|.+++|+| ++.+|++++. +.|++||++..
T Consensus 247 ~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~~-~~v~iwd~~~~---- 316 (447)
T 3dw8_B 247 SKGTIRLCDMRASALC---DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH--SGRYMMTRDY-LSVKVWDLNME---- 316 (447)
T ss_dssp TTSCEEEEETTTCSSS---CTTCEEECCC-----CCHHHHHTTCEEEEEECT--TSSEEEEEES-SEEEEEETTCC----
T ss_pred CCCeEEEEECcCCccc---cceeeEeccCCCccccccccccCceEEEEEECC--CCCEEEEeeC-CeEEEEeCCCC----
Confidence 9999999999765210 001456666654 899999999 9999999998 99999999852
Q ss_pred ceeEEeeeecccceeecc-----ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 146 NWQLQAEFQNAIDSVTMF-----RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~-----~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
.+++..+..|....... ......+..++|+|++. +|++|+.| +.|+|||+.++.
T Consensus 317 -~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-----~l~s~s~d-----g~v~iwd~~~~~ 375 (447)
T 3dw8_B 317 -NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-----VVMTGSYN-----NFFRMFDRNTKR 375 (447)
T ss_dssp -SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-----EEEEECST-----TEEEEEETTTCC
T ss_pred -ccccceeeccccccccccccccccccccceEEEECCCCC-----EEEEeccC-----CEEEEEEcCCCc
Confidence 23444555543211100 00000122489999987 89999999 999999987654
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.2e-27 Score=204.22 Aligned_cols=186 Identities=14% Similarity=0.242 Sum_probs=145.8
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
..+|.+.|++++|+|++++||+|+.||.|+||+.. ..+....+ .|...|.+++|+| +++|++++.|++|++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~-----~~~~~~~~-~~~~~V~~l~fsp---g~~L~S~s~D~~v~l 83 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ-----QVEVVIKL-EDRSAIKEMRFVK---GIYLVVINAKDTVYV 83 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECST-----TCEEEEEC-SSCCCEEEEEEET---TTEEEEEETTCEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCC-----CcEEEEEc-CCCCCEEEEEEcC---CCEEEEEECcCeEEE
Confidence 34788999999999999999999999999999987 44444444 4788999999998 569999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEE-----------eee
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQ-----------AEF 153 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-----------~~~ 153 (240)
||+..+ +++..+. +...|++++|+| ++.+|++|+.||+|++||+++. .+. ..+
T Consensus 84 Wd~~~~-------~~~~~~~-~~~~V~~v~~sp--~g~~l~sgs~dg~V~lwd~~~~------~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 84 LSLYSQ-------KVLTTVF-VPGKITSIDTDA--SLDWMLIGLQNGSMIVYDIDRD------QLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp EETTTC-------SEEEEEE-CSSCEEEEECCT--TCSEEEEEETTSCEEEEETTTT------EEEEEEECCHHHHHTCS
T ss_pred EECCCC-------cEEEEEc-CCCCEEEEEECC--CCCEEEEEcCCCcEEEEECCCC------ccccceecccccccccc
Confidence 999776 6666665 567899999999 9999999999999999999863 221 111
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC-----------
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP----------- 222 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~----------- 222 (240)
..|...| .+++|+|+.. .+|++|+.| +.| +||+++.... ..+..+
T Consensus 148 ~~h~~~V----------~sl~~sp~~~----~~l~~g~~d-----g~v-lWd~~~~~~~----~~~~~~~~~g~~~~~~~ 203 (902)
T 2oaj_A 148 AARLSPI----------VSIQWNPRDI----GTVLISYEY-----VTL-TYSLVENEIK----QSFIYELPPFAPGGDFS 203 (902)
T ss_dssp SSCCCCC----------CEEEEETTEE----EEEEEECSS-----CEE-EEETTTTEEE----EEECCCBCTTCCCSTTC
T ss_pred ccCCCCe----------EEEEEccCCC----CEEEEEeCC-----CcE-EEECCCCceE----EEEecccCCcCCCcccc
Confidence 2333334 4999999742 178888888 999 9999775422 222222
Q ss_pred ----CCCCCceEEEEEecCCC
Q 026295 223 ----EDRSDEVYAVAWALNIG 239 (240)
Q Consensus 223 ----~~h~~~v~~v~~sp~~~ 239 (240)
.+|...|++++|+||+.
T Consensus 204 ~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 204 EKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp CCTTSCBCCCEEEEEECTTSS
T ss_pred cccccccCCCeEEEEEcCCCC
Confidence 34567899999999974
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.1e-27 Score=188.41 Aligned_cols=197 Identities=15% Similarity=0.178 Sum_probs=144.6
Q ss_pred cccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCc-EEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 6 ATLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSS-FTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 6 ~~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
..|.+.|++++|+| ++++|++|+.||+|+|||+....... .+....+ .|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~--~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN--FDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC--CCEEEEEeCCCEEE
Confidence 67899999999999 99999999999999999986310001 1122222 58999999999998 99999999999999
Q ss_pred EEEeeec-cCC---CcccEEEEEee--e--ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec
Q 026295 84 LWEEIVE-DAQ---PLQWKLCKSFE--S--TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 84 iwd~~~~-~~~---~~~~~~~~~~~--~--~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
+||+... .+. ......+..+. . +...+.++.+....++.+|++++.|+.|++||+++ .++...+..
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~------~~~~~~~~~ 210 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT------LERLQIIEN 210 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT------CCEEEEEEC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC------CeeeEEEcc
Confidence 9999521 000 00001122221 1 34556677744334899999999999999999987 566667766
Q ss_pred --ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 156 --AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 156 --~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
|...+. +++|+|++. +|++|+.| +.|++||+++.. ....+. .+|..+|++++
T Consensus 211 ~~h~~~v~----------~~~~s~~~~-----~l~s~~~d-----g~i~iwd~~~~~----~~~~~~--~~~~~~v~~~~ 264 (437)
T 3gre_A 211 SPRHGAVS----------SICIDEECC-----VLILGTTR-----GIIDIWDIRFNV----LIRSWS--FGDHAPITHVE 264 (437)
T ss_dssp CGGGCCEE----------EEEECTTSC-----EEEEEETT-----SCEEEEETTTTE----EEEEEB--CTTCEEEEEEE
T ss_pred CCCCCceE----------EEEECCCCC-----EEEEEcCC-----CeEEEEEcCCcc----EEEEEe--cCCCCceEEEE
Confidence 566666 999999987 89999999 999999998643 222222 13666999998
Q ss_pred EecC
Q 026295 234 WALN 237 (240)
Q Consensus 234 ~sp~ 237 (240)
|+|.
T Consensus 265 ~~~~ 268 (437)
T 3gre_A 265 VCQF 268 (437)
T ss_dssp ECTT
T ss_pred eccc
Confidence 8875
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=7.7e-27 Score=185.99 Aligned_cols=193 Identities=16% Similarity=0.149 Sum_probs=151.1
Q ss_pred hhccc-----ccceEEEEEC----CCCCE-EEEEeCCCcEEEEeCCC------CCCCcEEEEeEe-------eecCccEE
Q 026295 4 AVATL-----DKGTTSSSWN----YCGQR-LATGSTDGTLSIFDSPD------PSSSSFTCNLKT-------KVHAGAIL 60 (240)
Q Consensus 4 ~~~~h-----~~~v~~~~~s----~~~~~-l~~~~~d~~i~iw~~~~------~~~~~~~~~~~~-------~~h~~~v~ 60 (240)
.+..| ...|.+++|+ |++++ |++++.|+.|++||+.. ...-.+.....+ ..|...|.
T Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (397)
T 1sq9_A 111 KLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 190 (397)
T ss_dssp EECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCC
T ss_pred eecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCce
Confidence 35556 5899999999 99999 99999999999999974 211011111144 34888999
Q ss_pred EEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeee---c---cccEEeEEEeecCCCcEEEEEeCC---C
Q 026295 61 KVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFES---T---STQVLDVQFGVSSTSLKLVAAYSD---G 131 (240)
Q Consensus 61 ~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~l~~~~~d---g 131 (240)
+++|+|+ + ++++++.|+.|++||++.. +++..+.. | ...|.+++|+| ++.+|++++.| |
T Consensus 191 ~~~~~~~--~-~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~h~~~~~~i~~i~~~~--~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 191 SVDISER--G-LIATGFNNGTVQISELSTL-------RPLYNFESQHSMINNSNSIRSVKFSP--QGSLLAIAHDSNSFG 258 (397)
T ss_dssp EEEECTT--S-EEEEECTTSEEEEEETTTT-------EEEEEEECCC---CCCCCEEEEEECS--STTEEEEEEEETTEE
T ss_pred EEEECCC--c-eEEEEeCCCcEEEEECCCC-------ceeEEEeccccccccCCccceEEECC--CCCEEEEEecCCCCc
Confidence 9999999 8 9999999999999999876 78888888 8 89999999999 99999999999 9
Q ss_pred cEEEEEecCcccccceeEEeeeec-------------ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCC
Q 026295 132 HVKVYELLDPLILKNWQLQAEFQN-------------AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQL 198 (240)
Q Consensus 132 ~v~iw~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~ 198 (240)
.|++||+++ .+....+.. |...+. +++|+|++. +|++++.|
T Consensus 259 ~i~i~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~~~~~~~~-----~l~~~~~d----- 312 (397)
T 1sq9_A 259 CITLYETEF------GERIGSLSVPTHSSQASLGEFAHSSWVM----------SLSFNDSGE-----TLCSAGWD----- 312 (397)
T ss_dssp EEEEEETTT------CCEEEEECBC--------CCBSBSSCEE----------EEEECSSSS-----EEEEEETT-----
T ss_pred eEEEEECCC------CcccceeccCcccccccccccccCCcEE----------EEEECCCCC-----EEEEEeCC-----
Confidence 999999987 455666665 555555 999999987 89999998
Q ss_pred CeEEEEEeecCCCCcceeEeee------cC------------CCCCCceEEEEEecCC
Q 026295 199 NSSKVWEFDEAHNRWLPVAELA------LP------------EDRSDEVYAVAWALNI 238 (240)
Q Consensus 199 ~~i~iw~~~~~~~~~~~~~~~~------~~------------~~h~~~v~~v~~sp~~ 238 (240)
+.|+|||+.+.. ....+. .+ ..|...|++++|+|++
T Consensus 313 g~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 313 GKLRFWDVKTKE----RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp SEEEEEETTTTE----EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred CeEEEEEcCCCc----eeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 999999997754 233333 22 1127899999999996
No 80
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.4e-27 Score=187.44 Aligned_cols=195 Identities=15% Similarity=0.203 Sum_probs=155.9
Q ss_pred cccccceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec------CccEEEEEEcCCCCC-CEEEEEe
Q 026295 6 ATLDKGTTSSSWNYC-GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH------AGAILKVVWVPPEFG-DAVACIC 77 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~-~~l~s~~ 77 (240)
..|...|.+++|+|+ +.+|++++.|+.|++||+. +.+.+..+..| ...|.+++|+|+ + .++++++
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~ 234 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK-----AKKEVIHLSYTSPNSGIKQQLSVVEWHPK--NSTRVATAT 234 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT-----TTEEEEEECCCCCSSCCCCCEEEEEECSS--CTTEEEEEE
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC-----CCCcceEEeccccccccCCceEEEEECCC--CCCEEEEEE
Confidence 568889999999999 7899999999999999998 45677777765 788999999998 6 6899999
Q ss_pred cCC---eEEEEEeeeccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee
Q 026295 78 SDG---SLLLWEEIVEDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF 153 (240)
Q Consensus 78 ~d~---~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~ 153 (240)
.|+ .|++||++... .++..+. .|...|.+++|+|. ++.+|++++.||.|++||+++ .+.+..+
T Consensus 235 ~d~~~~~i~~~d~~~~~------~~~~~~~~~~~~~v~~~~~s~~-~~~~l~s~~~dg~v~~wd~~~------~~~~~~~ 301 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNAN------TPLQTLNQGHQKGILSLDWCHQ-DEHLLLSSGRDNTVLLWNPES------AEQLSQF 301 (416)
T ss_dssp CCSSSCCCCEEETTSTT------SCSBCCCSCCSSCEEEEEECSS-CSSCEEEEESSSEEEEECSSS------CCEEEEE
T ss_pred CCCCCceEEEEeCCCCC------CCcEEeecCccCceeEEEeCCC-CCCeEEEEeCCCCEEEeeCCC------Cccceee
Confidence 998 99999997642 3455666 78899999999873 577899999999999999987 5677777
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeE----------ee----
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVA----------EL---- 219 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~----------~~---- 219 (240)
..|...+. +++|+|++.. +|++++.| +.|+||++.+......... .+
T Consensus 302 ~~~~~~v~----------~~~~s~~~~~----~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (416)
T 2pm9_A 302 PARGNWCF----------KTKFAPEAPD----LFACASFD-----NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNV 362 (416)
T ss_dssp ECSSSCCC----------CEEECTTCTT----EEEECCSS-----SEEEEEESCCCCCSSCC------------------
T ss_pred cCCCCceE----------EEEECCCCCC----EEEEEecC-----CcEEEEEccCCCCCcccccccccccCCcccccccc
Confidence 77777666 9999999821 89999998 9999999987653322100 00
Q ss_pred --------------ecCCCCCCceEEEEEecCCC
Q 026295 220 --------------ALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 220 --------------~~~~~h~~~v~~v~~sp~~~ 239 (240)
.....|..++++++|+||+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 396 (416)
T 2pm9_A 363 SREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK 396 (416)
T ss_dssp ----CCSCCCSSCCCCCSTTCCCSCCCEEETTTE
T ss_pred cccccccccccccccCCccccCCccceEEeeCCe
Confidence 11112677889999999973
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=180.52 Aligned_cols=199 Identities=15% Similarity=0.213 Sum_probs=148.1
Q ss_pred hhcccccceEEEE------ECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc----cEEEEE----EcCCCC
Q 026295 4 AVATLDKGTTSSS------WNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG----AILKVV----WVPPEF 69 (240)
Q Consensus 4 ~~~~h~~~v~~~~------~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~----~v~~~~----~~~~~~ 69 (240)
.+..|.+.|.+++ |+|++++|++++.|+.|++||+.... ..+..+..|.+ .+.++. |+|+
T Consensus 106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 179 (357)
T 3i2n_A 106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD----DPVANMEPVQGENKRDCWTVAFGNAYNQE-- 179 (357)
T ss_dssp EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS----SCSEEECCCTTSCCCCEEEEEEECCCC-C--
T ss_pred EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC----CcceeccccCCCCCCceEEEEEEeccCCC--
Confidence 4667999999995 57899999999999999999998431 13445544444 788888 6777
Q ss_pred CCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecC-CCcEEEEEeCCCcEEEEEecCccccccee
Q 026295 70 GDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSS-TSLKLVAAYSDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 70 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 148 (240)
+.++++++.|+.|++||++.. +. .....+...|.+++|+|.. ++.+|++++.||.|++||+++........
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~-------~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNM-------AL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTT-------EE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE
T ss_pred CCEEEEEccCCeEEEEECccC-------ce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee
Confidence 999999999999999999875 44 3345677899999998732 46789999999999999998743222221
Q ss_pred EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCc---------------
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRW--------------- 213 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~--------------- 213 (240)
. ..+..|...+. +++|+|++. .+|++++.| +.|++||++......
T Consensus 252 ~-~~~~~~~~~v~----------~~~~~~~~~----~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~ 311 (357)
T 3i2n_A 252 S-VSEKAHKSTVW----------QVRHLPQNR----ELFLTAGGA-----GGLHLWKYEYPIQRSKKDSEGIEMGVAGSV 311 (357)
T ss_dssp E-EEEECCSSCEE----------EEEEETTEE----EEEEEEETT-----SEEEEEEEECCSCC--CCTTSCCCCCCCEE
T ss_pred e-eccCCCcCCEE----------EEEECCCCC----cEEEEEeCC-----CcEEEeecCCCcccccccCCCCcccccccc
Confidence 1 13335655555 999999874 268999998 999999998754331
Q ss_pred ceeEeeecCCCCCCceEEEEEecCCC
Q 026295 214 LPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 214 ~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.....+ .+|...|++++|+|++.
T Consensus 312 ~~~~~~---~~~~~~v~~~~~s~~~~ 334 (357)
T 3i2n_A 312 SLLQNV---TLSTQPISSLDWSPDKR 334 (357)
T ss_dssp EEEEEE---ECCSSCEEEEEECSSST
T ss_pred ceeecc---ccCCCCeeEEEEcCCCC
Confidence 223333 36788999999999974
No 82
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=8.6e-26 Score=176.04 Aligned_cols=184 Identities=15% Similarity=0.317 Sum_probs=143.0
Q ss_pred hcccccceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCC----CcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec
Q 026295 5 VATLDKGTTSSSWNY--CGQRLATGSTDGTLSIFDSPDPSS----SSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
+..|...|.+++|+| ++++|++|+.|+.|++||+..... ...+.+..+..|...|.+++|+|+..+.++++++.
T Consensus 53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 567999999999999 699999999999999999974311 12367788889999999999998633688999999
Q ss_pred CCeEEEEEeeeccCC-----------------------------------------------------CcccEEEEEeee
Q 026295 79 DGSLLLWEEIVEDAQ-----------------------------------------------------PLQWKLCKSFES 105 (240)
Q Consensus 79 d~~v~iwd~~~~~~~-----------------------------------------------------~~~~~~~~~~~~ 105 (240)
|+.|++||++..... ......+..+..
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC
Confidence 999999998654210 011123555667
Q ss_pred ccccEEeEEEeecCCC----cEEEEEeCCCcEEEEEecCcccc-------------------------------------
Q 026295 106 TSTQVLDVQFGVSSTS----LKLVAAYSDGHVKVYELLDPLIL------------------------------------- 144 (240)
Q Consensus 106 ~~~~v~~~~~~~~~~~----~~l~~~~~dg~v~iw~~~~~~~~------------------------------------- 144 (240)
|...|.+++|+| ++ .+|++++.||.|++||++.....
T Consensus 213 h~~~i~~~~~~p--~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
T 3f3f_A 213 HKSLIRSISWAP--SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAEL 290 (351)
T ss_dssp CCSCEEEEEECC--CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCcceeEEEECC--CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeee
Confidence 889999999999 77 88999999999999999853110
Q ss_pred ---cceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 145 ---KNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 145 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
...+.+..+..|...+. +++|+|++. +|++|+.| +.|+||++.++.
T Consensus 291 ~~~~~~~~~~~~~~h~~~v~----------~~~~s~~~~-----~l~s~~~d-----g~v~iw~~~~~~ 339 (351)
T 3f3f_A 291 QSNLQVELLSEHDDHNGEVW----------SVSWNLTGT-----ILSSAGDD-----GKVRLWKATYSN 339 (351)
T ss_dssp CCSEEEEEEEEECTTSSCEE----------EEEECSSSC-----CEEEEETT-----SCEEEEEECTTS
T ss_pred cccccccEEEEEecccccEE----------EEEEcCCCC-----EEEEecCC-----CcEEEEecCcCc
Confidence 01234444455555554 999999987 89999999 999999998754
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.2e-26 Score=178.16 Aligned_cols=193 Identities=12% Similarity=0.167 Sum_probs=155.1
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC----
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD---- 79 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---- 79 (240)
.+..|.+.|.+++|+|++++|++++.|+.|++||+. +.+.+..+. +...|.+++|+|+ +.++++++.+
T Consensus 69 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----~~~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 69 TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS-----NGQCVATWK-SPVPVKRVEFSPC--GNYFLAILDNVMKN 140 (369)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-----TCCEEEEEE-CSSCEEEEEECTT--SSEEEEEECCBTTB
T ss_pred hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----CCcEEEEee-cCCCeEEEEEccC--CCEEEEecCCccCC
Confidence 466799999999999999999999999999999998 456666666 7889999999999 9999999998
Q ss_pred -CeEEEEEeeeccCCC----cccEEEEEeeeccc--cEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEee
Q 026295 80 -GSLLLWEEIVEDAQP----LQWKLCKSFESTST--QVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 80 -~~v~iwd~~~~~~~~----~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
+.|++||+....... ........+..+.. .+.+++|+| ++.+|++++.||.|++||+++. ......
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~ 213 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST--KGKYIIAGHKDGKISKYDVSNN-----YEYVDS 213 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG--GGCEEEEEETTSEEEEEETTTT-----TEEEEE
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC--CCCEEEEEcCCCEEEEEECCCC-----cEeEEE
Confidence 999999998653210 00012233344444 899999999 9999999999999999999863 355666
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEE
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAV 232 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v 232 (240)
+..+...+. +++|+|++. +|++++.| +.|++||+.+.. ....+. +...+..+
T Consensus 214 ~~~~~~~v~----------~~~~~~~~~-----~l~~~~~d-----~~i~v~d~~~~~----~~~~~~----~~~~~~~~ 265 (369)
T 3zwl_B 214 IDLHEKSIS----------DMQFSPDLT-----YFITSSRD-----TNSFLVDVSTLQ----VLKKYE----TDCPLNTA 265 (369)
T ss_dssp EECCSSCEE----------EEEECTTSS-----EEEEEETT-----SEEEEEETTTCC----EEEEEE----CSSCEEEE
T ss_pred EecCCCcee----------EEEECCCCC-----EEEEecCC-----ceEEEEECCCCc----eeeeec----CCCCceeE
Confidence 667766666 999999987 89999998 999999998754 223333 55589999
Q ss_pred EEecCCC
Q 026295 233 AWALNIG 239 (240)
Q Consensus 233 ~~sp~~~ 239 (240)
+|+|++.
T Consensus 266 ~~~~~~~ 272 (369)
T 3zwl_B 266 VITPLKE 272 (369)
T ss_dssp EECSSSS
T ss_pred EecCCCc
Confidence 9999874
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.2e-26 Score=183.43 Aligned_cols=180 Identities=16% Similarity=0.319 Sum_probs=149.4
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
|.+.|++++|+|++++|++|+.||.|++|+. +.+.+..+..|...|.+++|+|+ +.+|++++.|+.|++||+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK------TGALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNV 178 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET------TSCEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC------CCCeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEEC
Confidence 6789999999999999999999999999994 33567788899999999999999 999999999999999999
Q ss_pred eeccCCCcccEEEEEeeecccc---------------EEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEee
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQ---------------VLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
..+ +.+..+..+... +.+++|+| ++. +++++.||.|++||+++ .+....
T Consensus 179 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~g~i~~~d~~~------~~~~~~ 242 (425)
T 1r5m_A 179 ISG-------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD--DDK-FVIPGPKGAIFVYQITE------KTPTGK 242 (425)
T ss_dssp TTT-------EEEEEECCC---------------CCCBSCCEEEE--TTE-EEEECGGGCEEEEETTC------SSCSEE
T ss_pred CCC-------cEEEEeeccccCccceeeccccCCcceeeEEEEcC--CCE-EEEEcCCCeEEEEEcCC------Cceeee
Confidence 766 777777766665 99999998 655 88999999999999987 344555
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEE
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAV 232 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v 232 (240)
+..+...+. +++|+|++. +|++++.| +.|++||+.+.... ..+. +|...|+++
T Consensus 243 ~~~~~~~i~----------~~~~~~~~~-----~l~~~~~d-----~~i~i~d~~~~~~~----~~~~---~~~~~i~~~ 295 (425)
T 1r5m_A 243 LIGHHGPIS----------VLEFNDTNK-----LLLSASDD-----GTLRIWHGGNGNSQ----NCFY---GHSQSIVSA 295 (425)
T ss_dssp ECCCSSCEE----------EEEEETTTT-----EEEEEETT-----SCEEEECSSSBSCS----EEEC---CCSSCEEEE
T ss_pred eccCCCceE----------EEEECCCCC-----EEEEEcCC-----CEEEEEECCCCccc----eEec---CCCccEEEE
Confidence 566666666 999999987 89999998 99999999875433 2223 477799999
Q ss_pred EEecCC
Q 026295 233 AWALNI 238 (240)
Q Consensus 233 ~~sp~~ 238 (240)
+|+|++
T Consensus 296 ~~~~~~ 301 (425)
T 1r5m_A 296 SWVGDD 301 (425)
T ss_dssp EEETTT
T ss_pred EECCCC
Confidence 999986
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=181.65 Aligned_cols=171 Identities=13% Similarity=0.117 Sum_probs=131.4
Q ss_pred ccccceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee-ecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 7 TLDKGTTSSSWNY--CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK-VHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 7 ~h~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.|.+.|.+++|+| ++++|++|+.|++|++||+.. .+.+.... .|...|.+++|+|+ +.+|++|+.|+.|+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~-----~~~~~~~~~~~~~~i~~~~~~pd--g~~lasg~~dg~i~ 195 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED-----DSQYIVHSAKSDVEYSSGVLHKD--SLLLALYSPDGILD 195 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS-----SCEEEEECCCSSCCCCEEEECTT--SCEEEEECTTSCEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-----CcEEEEEecCCCCceEEEEECCC--CCEEEEEcCCCEEE
Confidence 3557899999999 999999999999999999983 34444443 45568999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEE-EEeee-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 84 LWEEIVEDAQPLQWKLC-KSFES-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
+||++.+ +.+ ..+.. |...|.+++|+| ++.+|++++ |+.|++||+++....... ..+..+...+.
T Consensus 196 iwd~~~~-------~~~~~~~~~~h~~~v~~l~fs~--~g~~l~s~~-~~~v~iwd~~~~~~~~~~---~~~~~~~~~~~ 262 (343)
T 3lrv_A 196 VYNLSSP-------DQASSRFPVDEEAKIKEVKFAD--NGYWMVVEC-DQTVVCFDLRKDVGTLAY---PTYTIPEFKTG 262 (343)
T ss_dssp EEESSCT-------TSCCEECCCCTTSCEEEEEECT--TSSEEEEEE-SSBEEEEETTSSTTCBSS---CCCBC-----C
T ss_pred EEECCCC-------CCCccEEeccCCCCEEEEEEeC--CCCEEEEEe-CCeEEEEEcCCCCcceee---ccccccccccc
Confidence 9999876 444 66777 899999999999 999999999 559999999874222111 11111111111
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEec-CCCCCCCeEEEEEeecCCCCcce
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFN-SDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~-dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
..+++|+|++. +|++++. | +.|+||++......|..
T Consensus 263 --------~~~~~~~~~g~-----~l~~~s~~d-----~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 263 --------TVTYDIDDSGK-----NMIAYSNES-----NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp --------CEEEEECTTSS-----EEEEEETTT-----TEEEEEEECTTTCSEEE
T ss_pred --------ceEEEECCCCC-----EEEEecCCC-----CcEEEEEEcccccceEe
Confidence 02699999987 8999888 6 99999999877766654
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=8e-26 Score=176.36 Aligned_cols=188 Identities=21% Similarity=0.260 Sum_probs=156.7
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+.+|...|.+++|+|++++|++|+.|+.|++|+.. ..........+...+..+.+++. +.+|++++.|+.++
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-----TGTTTRRFVGHTKDVLSVAFSSD--NRQIVSGSRDKTIK 153 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEE
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec-----ccceeeeecCCCCceeEEEEeec--CccceeecCCCeEE
Confidence 467799999999999999999999999999999998 44566666778888999999998 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||..... ........|...+..++|++.....++++++.|+.|++||+++ .++...+..|...+.
T Consensus 154 ~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~------~~~~~~~~~h~~~v~-- 219 (340)
T 4aow_A 154 LWNTLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN------CKLKTNHIGHTGYLN-- 219 (340)
T ss_dssp EECTTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT------TEEEEEECCCSSCEE--
T ss_pred EEEeCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC------CceeeEecCCCCcEE--
Confidence 99986531 3444556788899999998855567889999999999999987 577777777877776
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+++|+|++. +|++|+.| +.|++||+.+.. ....+. +...|.+++|+|++
T Consensus 220 --------~~~~s~~~~-----~l~s~s~D-----g~i~iwd~~~~~----~~~~~~----~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 220 --------TVTVSPDGS-----LCASGGKD-----GQAMLWDLNEGK----HLYTLD----GGDIINALCFSPNR 268 (340)
T ss_dssp --------EEEECTTSS-----EEEEEETT-----CEEEEEETTTTE----EEEEEE----CSSCEEEEEECSSS
T ss_pred --------EEEECCCCC-----EEEEEeCC-----CeEEEEEeccCc----eeeeec----CCceEEeeecCCCC
Confidence 999999987 89999999 999999987653 233333 44589999999985
No 87
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.8e-27 Score=187.71 Aligned_cols=193 Identities=13% Similarity=0.242 Sum_probs=152.6
Q ss_pred hhcccccceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCCC----cEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec
Q 026295 4 AVATLDKGTTSSSWNYC-GQRLATGSTDGTLSIFDSPDPSSS----SFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
.+..|.+.|.+++|+|+ +++|++++.|+.|++||+...... .......+..|...|.+++|+|+ .+.+|++++.
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~ 186 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS-LAHVFASAGS 186 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS-CTTEEEEESS
T ss_pred hccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC-CCcEEEEEcC
Confidence 36679999999999998 899999999999999999743200 00112234578999999999987 2478999999
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeec------cccEEeEEEeecCCC-cEEEEEeCCC---cEEEEEecCccccccee
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFEST------STQVLDVQFGVSSTS-LKLVAAYSDG---HVKVYELLDPLILKNWQ 148 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-~~l~~~~~dg---~v~iw~~~~~~~~~~~~ 148 (240)
|+.|++||++.+ +.+..+..+ ...|.+++|+| ++ .++++++.|+ .|++||+++. ..
T Consensus 187 dg~v~iwd~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~~~~i~~~d~~~~-----~~ 252 (416)
T 2pm9_A 187 SNFASIWDLKAK-------KEVIHLSYTSPNSGIKQQLSVVEWHP--KNSTRVATATGSDNDPSILIWDLRNA-----NT 252 (416)
T ss_dssp SSCEEEEETTTT-------EEEEEECCCCCSSCCCCCEEEEEECS--SCTTEEEEEECCSSSCCCCEEETTST-----TS
T ss_pred CCCEEEEECCCC-------CcceEEeccccccccCCceEEEEECC--CCCCEEEEEECCCCCceEEEEeCCCC-----CC
Confidence 999999999876 777777765 78899999999 76 6899999998 9999999873 13
Q ss_pred EEeeee-cccceeeccccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCC
Q 026295 149 LQAEFQ-NAIDSVTMFRKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRS 226 (240)
Q Consensus 149 ~~~~~~-~~~~~v~~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~ 226 (240)
....+. .|...+. +++|+| ++. +|++++.| +.|++||+.+.. ....+. +|.
T Consensus 253 ~~~~~~~~~~~~v~----------~~~~s~~~~~-----~l~s~~~d-----g~v~~wd~~~~~----~~~~~~---~~~ 305 (416)
T 2pm9_A 253 PLQTLNQGHQKGIL----------SLDWCHQDEH-----LLLSSGRD-----NTVLLWNPESAE----QLSQFP---ARG 305 (416)
T ss_dssp CSBCCCSCCSSCEE----------EEEECSSCSS-----CEEEEESS-----SEEEEECSSSCC----EEEEEE---CSS
T ss_pred CcEEeecCccCcee----------EEEeCCCCCC-----eEEEEeCC-----CCEEEeeCCCCc----cceeec---CCC
Confidence 334444 5555555 999999 665 89999998 999999988754 333344 577
Q ss_pred CceEEEEEecCC
Q 026295 227 DEVYAVAWALNI 238 (240)
Q Consensus 227 ~~v~~v~~sp~~ 238 (240)
..|++++|+|++
T Consensus 306 ~~v~~~~~s~~~ 317 (416)
T 2pm9_A 306 NWCFKTKFAPEA 317 (416)
T ss_dssp SCCCCEEECTTC
T ss_pred CceEEEEECCCC
Confidence 799999999987
No 88
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=4.7e-26 Score=180.18 Aligned_cols=166 Identities=10% Similarity=0.064 Sum_probs=133.1
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC----eE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG----SL 82 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~----~v 82 (240)
.|.+.|.+++|+|+|++|++++.++ +++|+.... ..........|...|.+++|+|+ +.++++++.|+ .+
T Consensus 174 ~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~---~~~~~~~~~~~~~~v~~v~fspd--g~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 174 ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTG---SCIARKTDFDKNWSLSKINFIAD--DTVLIAASLKKGKGIVL 247 (365)
T ss_dssp ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTC---CEEEEECCCCTTEEEEEEEEEET--TEEEEEEEESSSCCEEE
T ss_pred CCCCceEEEEEccCCceEEecccee-EEEEEeccC---cceeeeecCCCCCCEEEEEEcCC--CCEEEEEecCCcceeEE
Confidence 4778899999999999999998765 555555422 22233345578899999999999 99999998887 68
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-ecccceee
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAIDSVT 161 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~v~ 161 (240)
++|++..... .......+..|...|++++|+| +|.+|++|+.|++|+|||+++ ++++..+ ..|...|.
T Consensus 248 ~~~~~~~~~~---~~~~~~~~~~~~~~V~~~~~Sp--dg~~lasgs~D~~V~iwd~~~------~~~~~~~~~gH~~~V~ 316 (365)
T 4h5i_A 248 TKISIKSGNT---SVLRSKQVTNRFKGITSMDVDM--KGELAVLASNDNSIALVKLKD------LSMSKIFKQAHSFAIT 316 (365)
T ss_dssp EEEEEETTEE---EEEEEEEEESSCSCEEEEEECT--TSCEEEEEETTSCEEEEETTT------TEEEEEETTSSSSCEE
T ss_pred eeccccccee---cceeeeeecCCCCCeEeEEECC--CCCceEEEcCCCEEEEEECCC------CcEEEEecCcccCCEE
Confidence 8888865411 0123455677889999999999 999999999999999999987 5766664 57877777
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
+|+|+|++. +||+|+.| ++|+||++...
T Consensus 317 ----------~v~fSpdg~-----~laS~S~D-----~tvrvw~ip~~ 344 (365)
T 4h5i_A 317 ----------EVTISPDST-----YVASVSAA-----NTIHIIKLPLN 344 (365)
T ss_dssp ----------EEEECTTSC-----EEEEEETT-----SEEEEEECCTT
T ss_pred ----------EEEECCCCC-----EEEEEeCC-----CeEEEEEcCCC
Confidence 999999998 99999999 99999999654
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.6e-26 Score=180.20 Aligned_cols=189 Identities=16% Similarity=0.201 Sum_probs=146.5
Q ss_pred ccccceEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCCCcEE-EEeEeeecCccEEEEEE------cCCCCCCEEEEE
Q 026295 7 TLDKGTTSSSWNYC---GQRLATGSTDGTLSIFDSPDPSSSSFT-CNLKTKVHAGAILKVVW------VPPEFGDAVACI 76 (240)
Q Consensus 7 ~h~~~v~~~~~s~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~~~l~s~ 76 (240)
.|...|.+++|+|+ +++|++|+.|+.|++||+.. .+ .+..+.+|...|.++.| +|+ +.+|+++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~ 135 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA-----PEMPVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTG 135 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS-----CSSCSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC-----CCccEEEEEecccceEEEeeccccccCCC--ccEEEEE
Confidence 68889999999998 69999999999999999984 33 56778899999999965 566 8999999
Q ss_pred ecCCeEEEEEeeeccCCCcccEEEEEeeecc----ccEEeEE----EeecCCCcEEEEEeCCCcEEEEEecCccccccee
Q 026295 77 CSDGSLLLWEEIVEDAQPLQWKLCKSFESTS----TQVLDVQ----FGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 77 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~----~~v~~~~----~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 148 (240)
+.|+.|++||+.... .++..+..+. ..+.+++ |+| ++.++++++.||.|++||+++. +
T Consensus 136 ~~d~~i~vwd~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~------~ 201 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKD------DPVANMEPVQGENKRDCWTVAFGNAYNQ--EERVVCAGYDNGDIKLFDLRNM------A 201 (357)
T ss_dssp ETTSCEEEECTTSCS------SCSEEECCCTTSCCCCEEEEEEECCCC---CCCEEEEEETTSEEEEEETTTT------E
T ss_pred eCCCeEEEEeCCCCC------CcceeccccCCCCCCceEEEEEEeccCC--CCCEEEEEccCCeEEEEECccC------c
Confidence 999999999997652 1445554433 3788888 667 8999999999999999999873 3
Q ss_pred EEeeeecccceeeccccccceeeeEEEeC---CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCC
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNP---QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDR 225 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p---~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h 225 (240)
.. ....+...+. +++|+| ++. +|++++.| +.|++||+++......... ....+|
T Consensus 202 ~~-~~~~~~~~v~----------~~~~~~~~~~~~-----~l~~~~~d-----g~i~i~d~~~~~~~~~~~~--~~~~~~ 258 (357)
T 3i2n_A 202 LR-WETNIKNGVC----------SLEFDRKDISMN-----KLVATSLE-----GKFHVFDMRTQHPTKGFAS--VSEKAH 258 (357)
T ss_dssp EE-EEEECSSCEE----------EEEESCSSSSCC-----EEEEEEST-----TEEEEEEEEEEETTTEEEE--EEEECC
T ss_pred ee-eecCCCCceE----------EEEcCCCCCCCC-----EEEEECCC-----CeEEEEeCcCCCcccceee--eccCCC
Confidence 32 2234444555 999999 665 89999998 9999999988654433211 112257
Q ss_pred CCceEEEEEecCCC
Q 026295 226 SDEVYAVAWALNIG 239 (240)
Q Consensus 226 ~~~v~~v~~sp~~~ 239 (240)
...|++++|+|++.
T Consensus 259 ~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 259 KSTVWQVRHLPQNR 272 (357)
T ss_dssp SSCEEEEEEETTEE
T ss_pred cCCEEEEEECCCCC
Confidence 78999999999863
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=2e-25 Score=181.61 Aligned_cols=191 Identities=15% Similarity=0.177 Sum_probs=154.8
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|.+.|.+++|++++ +|++|+.||+|++||+. +.+.+..+.+|...|.+++|++...+.++++++.|+.|+
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~-----~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK-----KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC-----CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 466799999999999988 99999999999999998 567888899999999999998532278999999999999
Q ss_pred EEEeeeccCCCc----------------ccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccce
Q 026295 84 LWEEIVEDAQPL----------------QWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNW 147 (240)
Q Consensus 84 iwd~~~~~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~ 147 (240)
+||+........ ....+..+.+|...+.++ ++ ++.++++++.||.|++||+++ .
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~--~~~~l~~~~~d~~i~vwd~~~------~ 300 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG--HGNIVVSGSYDNTLIVWDVAQ------M 300 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE--ETTEEEEEETTSCEEEEETTT------T
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC--CCCEEEEEeCCCeEEEEECCC------C
Confidence 999976522100 000255666777888776 56 788999999999999999987 5
Q ss_pred eEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC
Q 026295 148 QLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD 227 (240)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 227 (240)
++...+..|...+. +++|+|++. +|++|+.| +.|++||+.++. ....+. +|..
T Consensus 301 ~~~~~~~~~~~~v~----------~~~~~~~~~-----~l~sg~~d-----g~i~vwd~~~~~----~~~~~~---~h~~ 353 (464)
T 3v7d_B 301 KCLYILSGHTDRIY----------STIYDHERK-----RCISASMD-----TTIRIWDLENGE----LMYTLQ---GHTA 353 (464)
T ss_dssp EEEEEECCCSSCEE----------EEEEETTTT-----EEEEEETT-----SCEEEEETTTTE----EEEEEC---CCSS
T ss_pred cEEEEecCCCCCEE----------EEEEcCCCC-----EEEEEeCC-----CcEEEEECCCCc----EEEEEe---CCCC
Confidence 77777777777776 999999987 89999999 999999998754 333333 5778
Q ss_pred ceEEEEEecC
Q 026295 228 EVYAVAWALN 237 (240)
Q Consensus 228 ~v~~v~~sp~ 237 (240)
.|++++|+++
T Consensus 354 ~v~~~~~~~~ 363 (464)
T 3v7d_B 354 LVGLLRLSDK 363 (464)
T ss_dssp CEEEEEECSS
T ss_pred cEEEEEEcCC
Confidence 9999999863
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-25 Score=172.05 Aligned_cols=184 Identities=14% Similarity=0.086 Sum_probs=151.2
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+.+.+|.+.|++++| +++++|++|+.||.|++||+. +.+....+..|...|.+++|+|+ +.++++++.|+.|
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~-----~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i 83 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD-----DQWLGTVVYTGQGFLNSVCYDSE--KELLLFGGKDTMI 83 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES-----SSEEEEEEEECSSCEEEEEEETT--TTEEEEEETTSCE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC-----CCEEEEEeecCCccEEEEEECCC--CCEEEEecCCCeE
Confidence 457889999999999 999999999999999999997 55777888899999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
++|++..... .+.+..+..|...|.+++| ++.++++++.||.|++|| . ......+..+...+.
T Consensus 84 ~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d--~------~~~~~~~~~~~~~v~- 146 (313)
T 3odt_A 84 NGVPLFATSG----EDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWK--E------GSLVYNLQAHNASVW- 146 (313)
T ss_dssp EEEETTCCTT----SCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEE--T------TEEEEEEECCSSCEE-
T ss_pred EEEEeeecCC----CCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEc--C------CcEEEecccCCCcee-
Confidence 9999876422 2556677889999999999 356899999999999999 2 355666677776666
Q ss_pred cccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 163 FRKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
++.|.| ++. +|++++.| +.|++||... ....+.. .|...|++++|+|++
T Consensus 147 ---------~~~~~~~~~~-----~l~~~~~d-----~~i~i~d~~~------~~~~~~~--~~~~~i~~~~~~~~~ 196 (313)
T 3odt_A 147 ---------DAKVVSFSEN-----KFLTASAD-----KTIKLWQNDK------VIKTFSG--IHNDVVRHLAVVDDG 196 (313)
T ss_dssp ---------EEEEEETTTT-----EEEEEETT-----SCEEEEETTE------EEEEECS--SCSSCEEEEEEEETT
T ss_pred ---------EEEEccCCCC-----EEEEEECC-----CCEEEEecCc------eEEEEec--cCcccEEEEEEcCCC
Confidence 899988 555 89999999 9999999321 2222221 277799999999986
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=5.1e-26 Score=196.67 Aligned_cols=190 Identities=17% Similarity=0.254 Sum_probs=156.5
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+.+..|.+.|++++|+|++++|++|+.||.|+||++. +++.+..+.+|.+.|.+++|+|+ +.+|++++.|+.|
T Consensus 49 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~-----~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i 121 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-----TGEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTV 121 (814)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-----TCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSEE
T ss_pred EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-----CCcEEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEE
Confidence 3466799999999999999999999999999999998 55778888899999999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc-ceee
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI-DSVT 161 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~v~ 161 (240)
++||+..+ +.....+..|...|.+++|+|. ++..+++++.||+|++||+... .....+..+. ..+.
T Consensus 122 ~vw~~~~~------~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~v~vwd~~~~------~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 122 KLWNWENN------WALEQTFEGHEHFVMCVAFNPK-DPSTFASGCLDRTVKVWSLGQS------TPNFTLTTGQERGVN 188 (814)
T ss_dssp EEEEGGGT------SEEEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEETTCS------SCSEEEECCCTTCCC
T ss_pred EEEECCCC------ceEEEEEcCCCCcEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC------cceeEEecCCCCCEE
Confidence 99999754 2667788889999999999872 4668999999999999999763 3333333332 3444
Q ss_pred ccccccceeeeEEEeC--CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 162 MFRKASCISASISWNP--QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p--~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+| ++. +|++++.| +.|++||+.++. ....+. +|...|++++|+|++.
T Consensus 189 ----------~~~~~~~~~~~-----~l~~~~~d-----g~i~~~d~~~~~----~~~~~~---~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 189 ----------YVDYYPLPDKP-----YMITASDD-----LTIKIWDYQTKS----CVATLE---GHMSNVSFAVFHPTLP 241 (814)
T ss_dssp ----------EEEECCSTTCC-----EEEEECTT-----SEEEEEETTTTE----EEEEEE---CCSSCEEEEEECSSSS
T ss_pred ----------EEEEEECCCCC-----EEEEEeCC-----CEEEEEECCCCc----EEEEEc---CCCCCEEEEEEcCCCC
Confidence 899999 655 89999998 999999987654 233333 5777999999999974
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=8.4e-26 Score=203.33 Aligned_cols=205 Identities=14% Similarity=0.138 Sum_probs=159.2
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|.+.|.+++|+|++++|++|+.|+.|+|||+. +++++..+.+|...|.+++|+|+..+.++++++.|+.|+
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA-----TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC-----CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 466799999999999999999999999999999998 567888999999999999999963367899999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecc-------
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNA------- 156 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~------- 156 (240)
+||+..+ .++..+.+|...|.+++|+| ++.++++++.||+|++||+++................
T Consensus 727 vwd~~~~-------~~~~~~~~h~~~v~~~~~sp--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1249)
T 3sfz_A 727 LWDLNQK-------ECRNTMFGHTNSVNHCRFSP--DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDV 797 (1249)
T ss_dssp EEETTSS-------SEEEEECCCSSCEEEEEECS--STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CC
T ss_pred EEECCCc-------chhheecCCCCCEEEEEEec--CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccc
Confidence 9999876 78888999999999999999 9999999999999999999764221110000000000
Q ss_pred -----cceeecc---------------------------ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEE
Q 026295 157 -----IDSVTMF---------------------------RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVW 204 (240)
Q Consensus 157 -----~~~v~~~---------------------------~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw 204 (240)
.....+. ..+...+.+++|+|++. ++++++.+ +.|++|
T Consensus 798 ~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-----~l~~~~~d-----g~v~vw 867 (1249)
T 3sfz_A 798 EVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-----LAVIALSQ-----YCVELW 867 (1249)
T ss_dssp CCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-----EEEEECSS-----SCEEEE
T ss_pred cceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-----EEEEEeCC-----CeEEEE
Confidence 0000000 01223455889999887 89999998 999999
Q ss_pred EeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 205 EFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
++.+.. ....+. +|...|++++|+|++.
T Consensus 868 d~~~~~----~~~~~~---~h~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 868 NIDSRL----KVADCR---GHLSWVHGVMFSPDGS 895 (1249)
T ss_dssp ETTTTE----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred EcCCCc----eeeecC---CCccceEEEEECCCCC
Confidence 988653 223333 6888999999999874
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=1.9e-25 Score=181.67 Aligned_cols=190 Identities=15% Similarity=0.223 Sum_probs=148.2
Q ss_pred hhcccccce-EEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 4 AVATLDKGT-TSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 4 ~~~~h~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
.+.+|.+.| .++.| ++++|++|+.||+|++||+. +.+.+..+.+|.+.|.+++|+|+ + ++++++.|+.|
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~-----~~~~~~~~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i 185 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI-----NKKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTV 185 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETT-----TTEEEEEECCCSSCEEEEEECST--T-EEEEEETTSCE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECC-----CCcEEEEEeCCCcCEEEEEEcCC--C-EEEEEeCCCCE
Confidence 467788775 56665 57899999999999999998 66788899999999999999887 5 89999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccccee--------------
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQ-------------- 148 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-------------- 148 (240)
++||+..+ +++..+..|...|.+++|++..++.++++++.||+|++||+++........
T Consensus 186 ~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 186 RVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EEEETTTT-------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EEEECCCC-------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 99999876 888899999999999999975588899999999999999998643221100
Q ss_pred ---EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCC
Q 026295 149 ---LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDR 225 (240)
Q Consensus 149 ---~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h 225 (240)
....+..|...+ .+ +++++. +|++|+.| +.|++||+.+.. ....+. +|
T Consensus 259 ~~~~~~~~~~~~~~v----------~~--~~~~~~-----~l~~~~~d-----~~i~vwd~~~~~----~~~~~~---~~ 309 (464)
T 3v7d_B 259 NPYFVGVLRGHMASV----------RT--VSGHGN-----IVVSGSYD-----NTLIVWDVAQMK----CLYILS---GH 309 (464)
T ss_dssp CTTEEEEECCCSSCE----------EE--EEEETT-----EEEEEETT-----SCEEEEETTTTE----EEEEEC---CC
T ss_pred CeEEEEEccCccceE----------EE--EcCCCC-----EEEEEeCC-----CeEEEEECCCCc----EEEEec---CC
Confidence 112222232222 24 356655 89999999 999999997643 233333 57
Q ss_pred CCceEEEEEecCCC
Q 026295 226 SDEVYAVAWALNIG 239 (240)
Q Consensus 226 ~~~v~~v~~sp~~~ 239 (240)
...|++++|+|++.
T Consensus 310 ~~~v~~~~~~~~~~ 323 (464)
T 3v7d_B 310 TDRIYSTIYDHERK 323 (464)
T ss_dssp SSCEEEEEEETTTT
T ss_pred CCCEEEEEEcCCCC
Confidence 77999999999864
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=2e-25 Score=178.01 Aligned_cols=174 Identities=11% Similarity=0.098 Sum_probs=134.7
Q ss_pred ccccceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCC-CCCEEEEEecCCeEEE
Q 026295 7 TLDKGTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPE-FGDAVACICSDGSLLL 84 (240)
Q Consensus 7 ~h~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~~~d~~v~i 84 (240)
.|...|.+++|+| ++++|++++.|+.|++||+. +.+....+. +...+.++.|++.. .+.++++++.|+.|++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN-----TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETT-----TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC-----CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 5899999999999 77899999999999999998 446666665 67889999998861 1459999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEeeeecccce----
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS---- 159 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~---- 159 (240)
||+..+ ..+..+..|...|.+++|+| ++. +|++++.||.|++||++... .....+..+...
T Consensus 171 ~d~~~~-------~~~~~~~~~~~~v~~~~~~~--~~~~ll~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 171 CDLKSG-------SCSHILQGHRQEILAVSWSP--RYDYILATASADSRVKLWDVRRAS-----GCLITLDQHNGKKSQA 236 (408)
T ss_dssp EESSSS-------CCCEEECCCCSCEEEEEECS--SCTTEEEEEETTSCEEEEETTCSS-----CCSEECCTTTTCSCCC
T ss_pred EeCCCc-------ceeeeecCCCCcEEEEEECC--CCCcEEEEEcCCCcEEEEECCCCC-----ccccccccccccccee
Confidence 999876 66778888999999999999 887 58999999999999998642 112222111000
Q ss_pred -eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 160 -VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 160 -v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
......+...+.+++|+|++. +|++++.| +.|++||+.+..
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d-----g~i~vwd~~~~~ 278 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGL-----HLLTVGTD-----NRMRLWNSSNGE 278 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSS-----EEEEEETT-----SCEEEEETTTCC
T ss_pred eccccccccCceeEEEEcCCCC-----EEEEecCC-----CeEEEEECCCCc
Confidence 000011223445999999987 89999998 999999987654
No 96
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=1.2e-25 Score=179.10 Aligned_cols=176 Identities=16% Similarity=0.149 Sum_probs=141.5
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee---c---CccEEEEEEcCCCCCCEEEEEecC
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV---H---AGAILKVVWVPPEFGDAVACICSD 79 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~~~l~s~~~d 79 (240)
..|...|.+++|+|++ +|++++.|+.|++||+. +.+.+..+.. | ...|.+++|+|+ +.+|++++.|
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~h~~~~~~i~~i~~~~~--~~~l~~~~~d 254 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELS-----TLRPLYNFESQHSMINNSNSIRSVKFSPQ--GSLLAIAHDS 254 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT-----TTEEEEEEECCC---CCCCCEEEEEECSS--TTEEEEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC-----CCceeEEEeccccccccCCccceEEECCC--CCEEEEEecC
Confidence 3478899999999999 99999999999999998 5577888888 8 999999999999 9999999999
Q ss_pred ---CeEEEEEeeeccCCCcccEEEEEeee-------------ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccc
Q 026295 80 ---GSLLLWEEIVEDAQPLQWKLCKSFES-------------TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLI 143 (240)
Q Consensus 80 ---~~v~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~ 143 (240)
+.|++||+... +++..+.. |...|.+++|+| ++.+|++++.||.|++||+++
T Consensus 255 ~~~g~i~i~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~--- 322 (397)
T 1sq9_A 255 NSFGCITLYETEFG-------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND--SGETLCSAGWDGKLRFWDVKT--- 322 (397)
T ss_dssp TTEEEEEEEETTTC-------CEEEEECBC--------CCBSBSSCEEEEEECS--SSSEEEEEETTSEEEEEETTT---
T ss_pred CCCceEEEEECCCC-------cccceeccCcccccccccccccCCcEEEEEECC--CCCEEEEEeCCCeEEEEEcCC---
Confidence 99999999766 77888887 899999999999 999999999999999999987
Q ss_pred ccceeEEeeee------cccceee-----ccccccceeeeEEEeCCCC-----CCCCceEEEEecCCCCCCCeEEEEEee
Q 026295 144 LKNWQLQAEFQ------NAIDSVT-----MFRKASCISASISWNPQKG-----ENQGSSFVLGFNSDTPQLNSSKVWEFD 207 (240)
Q Consensus 144 ~~~~~~~~~~~------~~~~~v~-----~~~~~~~~~~~v~~~p~~~-----~~~~~~l~~~~~dd~~~~~~i~iw~~~ 207 (240)
.+.+..+. .+..... ....+...+.+++|+|++. ...+.+|++++.| +.|++|++.
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d-----g~i~iw~~~ 394 (397)
T 1sq9_A 323 ---KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD-----RSIRWFREA 394 (397)
T ss_dssp ---TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT-----TEEEEEEEE
T ss_pred ---CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC-----CcEEEEEcC
Confidence 56666666 4400000 0000123344999999971 0011289999999 999999998
Q ss_pred cC
Q 026295 208 EA 209 (240)
Q Consensus 208 ~~ 209 (240)
++
T Consensus 395 ~g 396 (397)
T 1sq9_A 395 GG 396 (397)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.6e-25 Score=179.19 Aligned_cols=187 Identities=16% Similarity=0.202 Sum_probs=150.2
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|...|.+++| ++++|++|+.|+.|++||+... ...+..+.+|.+.|.+++|+|+ +.+|++++.|+.|+
T Consensus 171 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 171 TMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA----NHQIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQ 242 (401)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS----SCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEE
T ss_pred EecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC----cceeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEE
Confidence 45679999999999 5679999999999999999742 2456778889999999999998 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEe--CCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAY--SDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
+||++.. .++..+..|...|.+++|+| ++. ++++++ .|+.|++||+++ .+....+. +...+
T Consensus 243 iwd~~~~-------~~~~~~~~~~~~v~~~~~~p--~~~~ll~~~~gs~d~~i~i~d~~~------~~~~~~~~-~~~~v 306 (401)
T 4aez_A 243 IWDARSS-------IPKFTKTNHNAAVKAVAWCP--WQSNLLATGGGTMDKQIHFWNAAT------GARVNTVD-AGSQV 306 (401)
T ss_dssp EEETTCS-------SEEEEECCCSSCCCEEEECT--TSTTEEEEECCTTTCEEEEEETTT------CCEEEEEE-CSSCE
T ss_pred EccCCCC-------CccEEecCCcceEEEEEECC--CCCCEEEEecCCCCCEEEEEECCC------CCEEEEEe-CCCcE
Confidence 9999876 77888888999999999998 664 455554 799999999987 45555553 33334
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEE--ecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLG--FNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~--~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
. +++|+|++. +|+++ +.| +.|++|++.+.... ....+. +|...|++++|+||+
T Consensus 307 ~----------~~~~s~~~~-----~l~~~~g~~d-----g~i~v~~~~~~~~~--~~~~~~---~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 307 T----------SLIWSPHSK-----EIMSTHGFPD-----NNLSIWSYSSSGLT--KQVDIP---AHDTRVLYSALSPDG 361 (401)
T ss_dssp E----------EEEECSSSS-----EEEEEECTTT-----CEEEEEEEETTEEE--EEEEEE---CCSSCCCEEEECTTS
T ss_pred E----------EEEECCCCC-----eEEEEeecCC-----CcEEEEecCCccce--eEEEec---CCCCCEEEEEECCCC
Confidence 4 899999987 77774 366 99999999875422 222333 577799999999987
Q ss_pred C
Q 026295 239 G 239 (240)
Q Consensus 239 ~ 239 (240)
.
T Consensus 362 ~ 362 (401)
T 4aez_A 362 R 362 (401)
T ss_dssp S
T ss_pred C
Confidence 4
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-25 Score=181.90 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=147.2
Q ss_pred ccccceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 7 TLDKGTTSSSWNYCGQRL-ATGSTDGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.|.+.|.+++|+|++++| ++|+.|+.|+||++... .++.+..+. .|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKT---SKNVLKLRKRFCFSKRPNAISIAED--DTTVIIADKFGDVY 174 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSS---SSSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCC---CCceeeeeecccCCCCceEEEEcCC--CCEEEEEeCCCcEE
Confidence 566789999999999996 89999999999999721 112333443 56789999999999 99999999999999
Q ss_pred EEEeeeccCCCcccE-EEEEeeeccccEEeEEEeecCC---CcEEEEEeCCCcEEEEEecCcccccceeEEee-eecccc
Q 026295 84 LWEEIVEDAQPLQWK-LCKSFESTSTQVLDVQFGVSST---SLKLVAAYSDGHVKVYELLDPLILKNWQLQAE-FQNAID 158 (240)
Q Consensus 84 iwd~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~~~~~~ 158 (240)
+|++...... . +...+.+|...|.+++|+| + +.+|++++.|++|++||+++ ...+.. +..|..
T Consensus 175 ~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~sp--~~~~~~~l~s~~~d~~i~vwd~~~------~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 175 SIDINSIPEE----KFTQEPILGHVSMLTDVHLIK--DSDGHQFIITSDRDEHIKISHYPQ------CFIVDKWLFGHKH 242 (450)
T ss_dssp EEETTSCCCS----SCCCCCSEECSSCEEEEEEEE--CTTSCEEEEEEETTSCEEEEEESC------TTCEEEECCCCSS
T ss_pred EEecCCcccc----cccceeeecccCceEEEEEcC--CCCCCcEEEEEcCCCcEEEEECCC------CceeeeeecCCCC
Confidence 9998765210 1 3336678889999999999 8 88999999999999999986 344444 345666
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEe-----e-------------e
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAE-----L-------------A 220 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~-----~-------------~ 220 (240)
.+. +++|+ ++. +|++++.| +.|++||+.++......... + .
T Consensus 243 ~v~----------~~~~s-d~~-----~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 243 FVS----------SICCG-KDY-----LLLSAGGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp CEE----------EEEEC-STT-----EEEEEESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred ceE----------EEEEC-CCC-----EEEEEeCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 666 99999 776 89999998 99999999876532221100 0 0
Q ss_pred cCCCCCCceEEEEEecCCC
Q 026295 221 LPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 221 ~~~~h~~~v~~v~~sp~~~ 239 (240)
....+...|.+++|+|++.
T Consensus 302 ~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp ---CBCCCEEEEEECSSSS
T ss_pred ccccceEEEEEEEEeCCCC
Confidence 0002345799999999864
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=2.2e-25 Score=174.10 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=151.4
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCC-EEEEEecCCeEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGD-AVACICSDGSLL 83 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~d~~v~ 83 (240)
...|.+.|.+++|+|++++|++++.|+.|+||++.... .......+..|...|.+++|+|+ +. +|++++.|+.|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA--KNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT--TEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC--ccccceeeeecCCceEEEEECCC--CCcEEEEEcCCCeEE
Confidence 45799999999999999999999999999999997442 22334556689999999999999 99 999999999999
Q ss_pred EEEe-eeccCCCcccEEEEEeee--ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC---------ccccccee---
Q 026295 84 LWEE-IVEDAQPLQWKLCKSFES--TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD---------PLILKNWQ--- 148 (240)
Q Consensus 84 iwd~-~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~---------~~~~~~~~--- 148 (240)
+||+ ..+ ....+.. |...|.+++|+| +.+|++++.|+.|++||+++ ........
T Consensus 83 ~wd~~~~~--------~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 151 (342)
T 1yfq_A 83 KVDLIGSP--------SFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151 (342)
T ss_dssp EECSSSSS--------SEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCC
T ss_pred EEEeccCC--------ceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCC
Confidence 9999 764 2366777 889999999987 66799999999999999875 32111110
Q ss_pred EEee-------------------eeccc---c-eeeccccccceeeeEEEeC-CCCCCCCceEEEEecCCCCCCCeEEEE
Q 026295 149 LQAE-------------------FQNAI---D-SVTMFRKASCISASISWNP-QKGENQGSSFVLGFNSDTPQLNSSKVW 204 (240)
Q Consensus 149 ~~~~-------------------~~~~~---~-~v~~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~~~~~i~iw 204 (240)
.+.. +.... . .......+...+.+++|+| ++. +|++++.| +.|++|
T Consensus 152 ~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-----~l~~~~~d-----g~i~i~ 221 (342)
T 1yfq_A 152 KIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-----GYACSSID-----GRVAVE 221 (342)
T ss_dssp CEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-----EEEEEETT-----SEEEEE
T ss_pred ceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-----EEEEEecC-----CcEEEE
Confidence 0000 00000 0 0000011222566899999 876 89999998 999999
Q ss_pred EeecC--CCCcceeEeeecCC------CCCCceEEEEEecCCC
Q 026295 205 EFDEA--HNRWLPVAELALPE------DRSDEVYAVAWALNIG 239 (240)
Q Consensus 205 ~~~~~--~~~~~~~~~~~~~~------~h~~~v~~v~~sp~~~ 239 (240)
+++.. .........+..+. +|...|++++|+|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 264 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK 264 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC
Confidence 99876 11112233334332 2455999999999874
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.1e-24 Score=168.45 Aligned_cols=198 Identities=16% Similarity=0.219 Sum_probs=147.7
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
..|...|++++|+|++++|++|+.|++|+||++. +.+++..+.+|...+.++.+ . +.++++++.++.+++|
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~-----~~~~~~~~~~h~~~~~~~~~--~--~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----QQKRLRNMTSHSARVGSLSW--N--SYILSSGSRSGHIHHH 134 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-----TTEEEEEEECCSSCEEEEEE--E--TTEEEEEETTSEEEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-----CceeEEEecCccceEEEeec--C--CCEEEEEecCCceEee
Confidence 4677889999999999999999999999999998 66888999999998887665 4 6789999999999999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee----
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT---- 161 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~---- 161 (240)
+..... ..+..+..|...+..+.|++ ++.++++++.|++|++||+++......... ....+...+.
T Consensus 135 ~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 135 DVRVAE------HHVATLSGHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGWVPLQ--TFTQHQGAVKAVAW 204 (318)
T ss_dssp ETTSSS------CEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEESSCBTTBSCCSE--EECCCCSCEEEEEE
T ss_pred ecCCCc------eeEEEEcCccCceEEEEEcC--CCCEEEEEecCcceeEEECCCCccccccee--eecccCCceEEEEe
Confidence 986542 56777888999999999988 999999999999999999976432111100 0000000000
Q ss_pred -c-----------------------------cccccceeeeEEEeCCCCCCCCceEEEEe--cCCCCCCCeEEEEEeecC
Q 026295 162 -M-----------------------------FRKASCISASISWNPQKGENQGSSFVLGF--NSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 162 -~-----------------------------~~~~~~~~~~v~~~p~~~~~~~~~l~~~~--~dd~~~~~~i~iw~~~~~ 209 (240)
+ .......+..+.|+|.+. .+++++ .| +.|+|||+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~sg~~d-----~~i~iwd~~~~ 274 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK-----ELISGHGFAQ-----NQLVIWKYPTM 274 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTT-----EEEEEECTTT-----CCEEEEETTTC
T ss_pred cCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccccc-----ceEEEEEcCC-----CEEEEEECCCC
Confidence 0 000112445777888876 455443 56 99999998875
Q ss_pred CCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 210 HNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 210 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. ....+. +|.+.|++|+|+||+.
T Consensus 275 ~----~~~~l~---gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 275 A----KVAELK---GHTSRVLSLTMSPDGA 297 (318)
T ss_dssp C----EEEEEC---CCSSCEEEEEECTTSS
T ss_pred c----EEEEEc---CCCCCEEEEEEcCCCC
Confidence 4 334444 6888999999999975
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=3.1e-25 Score=185.89 Aligned_cols=191 Identities=13% Similarity=0.222 Sum_probs=156.8
Q ss_pred hhcccccc-eEEEEECC--CCCEEEEEeCCCcEEEEeCCCCC---CCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe
Q 026295 4 AVATLDKG-TTSSSWNY--CGQRLATGSTDGTLSIFDSPDPS---SSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 4 ~~~~h~~~-v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
.+..|.+. |++++|+| ++++|++|+.||.|+||++.... ....+.+..+..|...|.+++|+|+ ++++++++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~ 135 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVG 135 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEE
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEec
Confidence 46779999 99999999 99999999999999999996110 0012567778889999999999999 99999999
Q ss_pred cC----CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEee
Q 026295 78 SD----GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 78 ~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
.+ +.|++||. + ..+..+..|...|.+++|+| ++. .+++++.|+.|++||+.+ .+....
T Consensus 136 ~~~~~~~~v~~~d~--~-------~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~vwd~~~------~~~~~~ 198 (615)
T 1pgu_A 136 EGRDNFGVFISWDS--G-------NSLGEVSGHSQRINACHLKQ--SRPMRSMTVGDDGSVVFYQGPP------FKFSAS 198 (615)
T ss_dssp CCSSCSEEEEETTT--C-------CEEEECCSCSSCEEEEEECS--SSSCEEEEEETTTEEEEEETTT------BEEEEE
T ss_pred cCCCCccEEEEEEC--C-------CcceeeecCCccEEEEEECC--CCCcEEEEEeCCCcEEEEeCCC------cceeee
Confidence 87 68999983 3 67788889999999999999 886 799999999999999887 677777
Q ss_pred eecccc---eeeccccccceeeeEEEeCC-CCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEee-ecCCCCCC
Q 026295 153 FQNAID---SVTMFRKASCISASISWNPQ-KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAEL-ALPEDRSD 227 (240)
Q Consensus 153 ~~~~~~---~v~~~~~~~~~~~~v~~~p~-~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~-~~~~~h~~ 227 (240)
+..|.. .+. +++|+|+ +. +|++++.| +.|++||+.++. ....+ ....+|..
T Consensus 199 ~~~~~~~~~~v~----------~~~~~~~~~~-----~l~~~~~d-----g~i~vwd~~~~~----~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 199 DRTHHKQGSFVR----------DVEFSPDSGE-----FVITVGSD-----RKISCFDGKSGE----FLKYIEDDQEPVQG 254 (615)
T ss_dssp ECSSSCTTCCEE----------EEEECSTTCC-----EEEEEETT-----CCEEEEETTTCC----EEEECCBTTBCCCS
T ss_pred ecccCCCCceEE----------EEEECCCCCC-----EEEEEeCC-----CeEEEEECCCCC----EeEEecccccccCC
Confidence 777766 666 9999999 76 89999998 999999987654 22222 11115778
Q ss_pred ceEEEEEecCC
Q 026295 228 EVYAVAWALNI 238 (240)
Q Consensus 228 ~v~~v~~sp~~ 238 (240)
.|++++|+ ++
T Consensus 255 ~v~~~~~~-~~ 264 (615)
T 1pgu_A 255 GIFALSWL-DS 264 (615)
T ss_dssp CEEEEEES-SS
T ss_pred ceEEEEEc-CC
Confidence 99999998 65
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.2e-26 Score=200.76 Aligned_cols=201 Identities=11% Similarity=0.129 Sum_probs=146.1
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEE-EEeEee-----ecCccEEEEEEcCCCCCCEEEEEec
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFT-CNLKTK-----VHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~-----~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
+.+|...+.+++|+|++++|++|+.|++|++||+......... ....+. +|...|.+++|+|+ +++|++++.
T Consensus 431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspd--g~~LAsgs~ 508 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAE--TLELAVSIE 508 (902)
T ss_dssp CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETT--TTEEEEEET
T ss_pred ccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCC--CCeEEEEec
Confidence 5667777888889999999999999999999999743210100 001121 78899999999999 999999999
Q ss_pred CCeEEEEEeeeccCC--------------------------------------CcccEEEEEeeeccccEEeEEEeecCC
Q 026295 79 DGSLLLWEEIVEDAQ--------------------------------------PLQWKLCKSFESTSTQVLDVQFGVSST 120 (240)
Q Consensus 79 d~~v~iwd~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (240)
|++|+||++..+... ...++++..+.+|...|++++|+| +
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp--d 586 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN--I 586 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB--T
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC--C
Confidence 999999999765100 001356778888999999999999 9
Q ss_pred CcEEEEEeCCCcEEEEEecCcccccceeEEe-----eee-cccceeeccccccceeeeEEEe-----CCCCCCCCceEEE
Q 026295 121 SLKLVAAYSDGHVKVYELLDPLILKNWQLQA-----EFQ-NAIDSVTMFRKASCISASISWN-----PQKGENQGSSFVL 189 (240)
Q Consensus 121 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-----~~~-~~~~~v~~~~~~~~~~~~v~~~-----p~~~~~~~~~l~~ 189 (240)
| +||+|+.|++|++||++++ ..+. .+. .|...|. +++|+ |++. .+.+|++
T Consensus 587 G-~lAsgs~D~tv~lwd~~~~------~~~~~~~~~~~~~gh~~~V~----------sv~Fs~~~~~~Dg~--~~~~l~s 647 (902)
T 2oaj_A 587 G-FVGIAYAAGSLMLIDRRGP------AIIYMENIREISGAQSACVT----------CIEFVIMEYGDDGY--SSILMVC 647 (902)
T ss_dssp S-EEEEEETTSEEEEEETTTT------EEEEEEEGGGTCSSCCCCEE----------EEEEEEEECTTSSS--EEEEEEE
T ss_pred c-EEEEEeCCCcEEEEECCCC------eEEEEeehhHhccccccceE----------EEEEEEEecCCCCC--cceEEEE
Confidence 9 9999999999999998763 2221 222 4444455 99999 8751 1238999
Q ss_pred EecCCCCCCCeEEEEEe---ecCCCCcceeEeeecCC--CCCCceEEEE-EecC
Q 026295 190 GFNSDTPQLNSSKVWEF---DEAHNRWLPVAELALPE--DRSDEVYAVA-WALN 237 (240)
Q Consensus 190 ~~~dd~~~~~~i~iw~~---~~~~~~~~~~~~~~~~~--~h~~~v~~v~-~sp~ 237 (240)
|+.| ++|++||+ .++.. ...+.++. .|.++|..++ |+.+
T Consensus 648 gs~D-----~tv~~wd~~p~~~g~~----~~~~~~~~~~~~~~~v~~i~~~~~~ 692 (902)
T 2oaj_A 648 GTDM-----GEVITYKILPASGGKF----DVQLMDITNVTSKGPIHKIDAFSKE 692 (902)
T ss_dssp EETT-----SEEEEEEEEECGGGCE----EEEEEEEEECCSSCCCCEEEEEETT
T ss_pred EecC-----CcEEEEEEecCCCCcE----EEEecCceecCCCCceEEEEeEecC
Confidence 9999 99999999 44332 22222221 2456888887 7743
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-24 Score=167.19 Aligned_cols=178 Identities=14% Similarity=0.217 Sum_probs=150.4
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC-CCCCCEEEEEecCCeE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP-PEFGDAVACICSDGSL 82 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v 82 (240)
.+..|...|.+++| ++++|++++.|+.|++||.. +....+..|...+.++.|.| + +.++++++.|+.|
T Consensus 99 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~-------~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i 167 (313)
T 3odt_A 99 TLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG-------SLVYNLQAHNASVWDAKVVSFS--ENKFLTASADKTI 167 (313)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-------EEEEEEECCSSCEEEEEEEETT--TTEEEEEETTSCE
T ss_pred chhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-------cEEEecccCCCceeEEEEccCC--CCEEEEEECCCCE
Confidence 35678899999999 67899999999999999933 56777888999999999988 6 8999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
++||. . .....+.. +...+.+++|+| ++. +++++.||.|++||+++ .+....+..|...+.
T Consensus 168 ~i~d~--~-------~~~~~~~~~~~~~i~~~~~~~--~~~-~~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 168 KLWQN--D-------KVIKTFSGIHNDVVRHLAVVD--DGH-FISCSNDGLIKLVDMHT------GDVLRTYEGHESFVY 229 (313)
T ss_dssp EEEET--T-------EEEEEECSSCSSCEEEEEEEE--TTE-EEEEETTSEEEEEETTT------CCEEEEEECCSSCEE
T ss_pred EEEec--C-------ceEEEEeccCcccEEEEEEcC--CCe-EEEccCCCeEEEEECCc------hhhhhhhhcCCceEE
Confidence 99994 3 56666766 889999999999 888 99999999999999987 567777777777776
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+++|+|++ .|++++.| +.|++||+.+.. ....+. .|...|++++|+|++
T Consensus 230 ----------~~~~~~~~------~l~~~~~d-----g~v~iwd~~~~~----~~~~~~---~~~~~i~~~~~~~~~ 278 (313)
T 3odt_A 230 ----------CIKLLPNG------DIVSCGED-----RTVRIWSKENGS----LKQVIT---LPAISIWSVDCMSNG 278 (313)
T ss_dssp ----------EEEECTTS------CEEEEETT-----SEEEEECTTTCC----EEEEEE---CSSSCEEEEEECTTS
T ss_pred ----------EEEEecCC------CEEEEecC-----CEEEEEECCCCc----eeEEEe---ccCceEEEEEEccCC
Confidence 99999988 48899998 999999988764 233334 466699999999986
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.7e-25 Score=179.46 Aligned_cols=199 Identities=12% Similarity=0.093 Sum_probs=151.1
Q ss_pred cccceEEEE--ECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee--cCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 8 LDKGTTSSS--WNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV--HAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 8 h~~~v~~~~--~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
+...+.++. +++++++|++|+.|+.|++||+. +.+++..+.. |.+.|.+++|+|+ +.+|++++.|+.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-----~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~ 239 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR-----TLERLQIIENSPRHGAVSSICIDEE--CCVLILGTTRGIID 239 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT-----TCCEEEEEECCGGGCCEEEEEECTT--SCEEEEEETTSCEE
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC-----CCeeeEEEccCCCCCceEEEEECCC--CCEEEEEcCCCeEE
Confidence 456677777 66889999999999999999998 5567788887 8999999999999 99999999999999
Q ss_pred EEEeeeccCCCcccEEEEEee-eccccEEeEEEeec--CCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE-STSTQVLDVQFGVS--STSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
+||++.+ +++..+. .+...|.+++|+|. +++.+|++++.||.|++||+++ .++...+..+...+
T Consensus 240 iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~ 306 (437)
T 3gre_A 240 IWDIRFN-------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK------GHCQYAFINSDEQP 306 (437)
T ss_dssp EEETTTT-------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT------TEEEEEEESSSSCC
T ss_pred EEEcCCc-------cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC------CcEEEEEEcCCCCC
Confidence 9999876 7888776 67789999977763 3678999999999999999987 45666666553322
Q ss_pred e-----ccc-----------cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeE-------
Q 026295 161 T-----MFR-----------KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVA------- 217 (240)
Q Consensus 161 ~-----~~~-----------~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~------- 217 (240)
. +.+ .+...+.+++|+ ++. +|++|+.| +.|++||+.++........
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-----~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~ 375 (437)
T 3gre_A 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-----ILLTDEAT-----SSIVMFSLNELSSSKAVISPSRFSDV 375 (437)
T ss_dssp CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-----EEEEEGGG-----TEEEEEETTCGGGCEEEECC--CCCE
T ss_pred ccceecccccccccceecccccCCceEEEEEC-Cce-----EEEecCCC-----CeEEEEECCCcccceEEecccccCce
Confidence 2 110 133346689999 444 89999999 9999999987654322210
Q ss_pred -----------------------eeecCCCCCCceEEEEEecC
Q 026295 218 -----------------------ELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 218 -----------------------~~~~~~~h~~~v~~v~~sp~ 237 (240)
.......|.+.|++++|+|+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 376 FIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp EEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred EEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 00111238889999999998
No 105
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=1.3e-25 Score=176.65 Aligned_cols=195 Identities=11% Similarity=0.141 Sum_probs=146.8
Q ss_pred cccccceEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCC--CCEEEEEe
Q 026295 6 ATLDKGTTSSSWNYC----GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEF--GDAVACIC 77 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~--~~~l~s~~ 77 (240)
.+|.+.|++++|+|+ ...+++++.++.|+||++.... ....+..+. .|...|.+++|+|+.. +.+|++++
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 469999999999984 4566666667799999998321 122222222 2667899999998822 45899999
Q ss_pred cCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee---e
Q 026295 78 SDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF---Q 154 (240)
Q Consensus 78 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~---~ 154 (240)
.|+.|++||+..+ +.+..+..|...|.+++|+|. ++.+|++++.||.|++||+++ .+....+ .
T Consensus 93 ~dg~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~ 158 (366)
T 3k26_A 93 SRGIIRIINPITM-------QCIKHYVGHGNAINELKFHPR-DPNLLLSVSKDHALRLWNIQT------DTLVAIFGGVE 158 (366)
T ss_dssp TTCEEEEECTTTC-------CEEEEEESCCSCEEEEEECSS-CTTEEEEEETTSCEEEEETTT------TEEEEEECSTT
T ss_pred CCCEEEEEEchhc-------eEeeeecCCCCcEEEEEECCC-CCCEEEEEeCCCeEEEEEeec------CeEEEEecccc
Confidence 9999999999766 778888899999999999873 567899999999999999987 4555555 4
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCccee------------------
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPV------------------ 216 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~------------------ 216 (240)
.+...+. +++|+|++. +|++++.| +.|++||+++........
T Consensus 159 ~~~~~v~----------~~~~~~~~~-----~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 159 GHRDEVL----------SADYDLLGE-----KIMSCGMD-----HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp SCSSCEE----------EEEECTTSS-----EEEEEETT-----SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred cccCcee----------EEEECCCCC-----EEEEecCC-----CCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 5555555 999999887 89999998 999999997643211110
Q ss_pred ---EeeecCCCCCCceEEEEEec
Q 026295 217 ---AELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 217 ---~~~~~~~~h~~~v~~v~~sp 236 (240)
..+....+|...|++++|++
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~~ 241 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWLG 241 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEET
T ss_pred eccCccccccCCcceEEEEEEcC
Confidence 01112234888999999983
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.3e-25 Score=172.59 Aligned_cols=158 Identities=11% Similarity=0.108 Sum_probs=118.9
Q ss_pred cccccceEEEEECC---CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc---cEEEEEEcCCCCCCEE------
Q 026295 6 ATLDKGTTSSSWNY---CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG---AILKVVWVPPEFGDAV------ 73 (240)
Q Consensus 6 ~~h~~~v~~~~~s~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l------ 73 (240)
..|...+..++|++ ++.+||+|+.|++|+|||+. +++++.++.+|.. .+.+++|+|+ |.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~-----TGk~l~tL~g~~~~v~~v~~vafSpd--G~~lvs~s~~ 247 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK-----TGQLLKKMHIDDSYQASVCHKAYSEM--GLLFIVLSHP 247 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-----TCCEEEEEECCC---CCCEEEEEEET--TEEEEEEC--
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-----CCcEEEEEcCCCcceeeeEEEEECCC--CCEEEEeccC
Confidence 34666666677777 56789999999999999998 7788888886543 5777899998 8876
Q ss_pred ------EEEecCCeEEEEEeeeccCCCcccEEEEEe-----eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcc
Q 026295 74 ------ACICSDGSLLLWEEIVEDAQPLQWKLCKSF-----ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPL 142 (240)
Q Consensus 74 ------~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 142 (240)
++|+.|++|++||..++ +.+..+ .+|...+. ..+. ++.++++++.|++|+|||+.+
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tg-------k~l~v~~~~~p~Gh~~~~l--sg~~--sg~~lASgS~DgTIkIWDl~t-- 314 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTT-------LSVGVMLYCLPPGQAGRFL--EGDV--KDHCAAAILTSGTIAIWDLLL-- 314 (356)
T ss_dssp ----------CCEEEEEEETTTT-------EEEEEEEECCCTTCCCCEE--EEEE--ETTEEEEEETTSCEEEEETTT--
T ss_pred CCcceeeccCCCcEEEEEECCCC-------EEEEEEEeeccCCCcceeE--cccc--CCCEEEEEcCCCcEEEEECCC--
Confidence 56788999999999766 655544 24444433 3333 577899999999999999988
Q ss_pred cccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEe
Q 026295 143 ILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEF 206 (240)
Q Consensus 143 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~ 206 (240)
+++..++..|...+. ..++|+|++. +|++|+.| ++|+|||+
T Consensus 315 ----Gk~l~tL~gH~~~vv---------s~vafSPDG~-----~LaSGS~D-----~TIklWd~ 355 (356)
T 2w18_A 315 ----GQCTALLPPVSDQHW---------SFVKWSGTDS-----HLLAGQKD-----GNIFVYHY 355 (356)
T ss_dssp ----CSEEEEECCC--CCC---------CEEEECSSSS-----EEEEECTT-----SCEEEEEE
T ss_pred ----CcEEEEecCCCCCeE---------EEEEECCCCC-----EEEEEECC-----CcEEEecC
Confidence 688888887765433 1589999988 89999998 99999996
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.4e-24 Score=171.18 Aligned_cols=175 Identities=11% Similarity=0.082 Sum_probs=121.0
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---------C---------------------------CcEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPS---------S---------------------------SSFTC 48 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---------~---------------------------~~~~~ 48 (240)
+..|.+.|.+++|+|+|++|++|+.++ ++||++.... . .+.++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 367889999999999999999887764 6788754210 0 01223
Q ss_pred EeEeeecCccEEEEEEcCCC---------------CC------------------CEEEE--EecCCeEEEEEeeeccCC
Q 026295 49 NLKTKVHAGAILKVVWVPPE---------------FG------------------DAVAC--ICSDGSLLLWEEIVEDAQ 93 (240)
Q Consensus 49 ~~~~~~h~~~v~~~~~~~~~---------------~~------------------~~l~s--~~~d~~v~iwd~~~~~~~ 93 (240)
+..+. +...|.++.|+++. .+ .+++. ++.||.|++||+..+...
T Consensus 94 ~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~ 172 (355)
T 3vu4_A 94 VSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSA 172 (355)
T ss_dssp EEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC----
T ss_pred EEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcc
Confidence 33333 45678888886640 01 12333 456777777777643100
Q ss_pred --------CcccEE-EEEeeeccccEEeEEEeecCCCcEEEEEeCCCc-EEEEEecCcccccceeEEeeee-c-ccceee
Q 026295 94 --------PLQWKL-CKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGH-VKVYELLDPLILKNWQLQAEFQ-N-AIDSVT 161 (240)
Q Consensus 94 --------~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-v~iw~~~~~~~~~~~~~~~~~~-~-~~~~v~ 161 (240)
.....+ +..+.+|...|.+++|+| ++.+|++++.|++ |++||+++ ++++..+. + |...+.
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~--~g~~l~s~s~d~~~v~iwd~~~------~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 173 TTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR--KSDMVATCSQDGTIIRVFKTED------GVLVREFRRGLDRADVV 244 (355)
T ss_dssp --------------CCEEECCCSSCEEEEEECT--TSSEEEEEETTCSEEEEEETTT------CCEEEEEECTTCCSCEE
T ss_pred ccccccccccccCcccEEEEccCCceEEEEECC--CCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCCCCCcEE
Confidence 000112 677888999999999999 9999999999998 99999987 56777776 3 666666
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
+++|+|++. +|++++.| +.|+|||+...
T Consensus 245 ----------~~~~s~~~~-----~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 245 ----------DMKWSTDGS-----KLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp ----------EEEECTTSC-----EEEEEETT-----CEEEEEESSCC
T ss_pred ----------EEEECCCCC-----EEEEEECC-----CEEEEEEccCC
Confidence 999999987 89999999 99999999764
No 108
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=4e-24 Score=172.09 Aligned_cols=180 Identities=21% Similarity=0.336 Sum_probs=147.3
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeE--eeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 12 TTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLK--TKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
++.|+||++ ++||+|. |++|+|||.. ++++... +.+|...|++|+|+|+ |.+|++|+.|+.|++||+..
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~-----tg~~~~~~~~~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSAS-----SGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETT-----TCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTT
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECC-----CCCEEEEEEecCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCC
Confidence 567999975 5888876 8999999998 4444444 4467888999999999 99999999999999999987
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccce
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCI 169 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (240)
+ +++..+.+|...+.++++ ++.+|++++.|+.+++||.... ...+..+..|...+.
T Consensus 179 ~-------~~~~~~~~h~~~v~~~s~----~~~~l~sgs~d~~i~~~d~~~~-----~~~~~~~~~h~~~~~-------- 234 (420)
T 4gga_A 179 Q-------KRLRNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVA-----EHHVATLSGHSQEVC-------- 234 (420)
T ss_dssp T-------EEEEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSS-----SCEEEEEECCSSCEE--------
T ss_pred C-------cEEEEEeCCCCceEEEee----CCCEEEEEeCCCceeEeeeccc-----ceeeEEeccccccee--------
Confidence 6 889999999999988877 5678999999999999998763 344556667766665
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.+.|+|++. ++++++.| +.|+||+..++........... .|...|.+++|+|+..
T Consensus 235 --~~~~~~~g~-----~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~---~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 235 --GLRWAPDGR-----HLASGGND-----NLVNVWPSAPGEGGWVPLQTFT---QHQGAVKAVAWCPWQS 289 (420)
T ss_dssp --EEEECTTSS-----EEEEEETT-----SCEEEEESSCCSSCSCCSEEEC---CCSSCEEEEEECTTCT
T ss_pred --eeeecCCCC-----eeeeeecc-----ccceEEeeccccccceeeeeec---ccCCceeeeeeCCCcc
Confidence 899999987 89999999 9999999987765544433333 5777999999999764
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=175.30 Aligned_cols=185 Identities=9% Similarity=0.001 Sum_probs=134.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----CCcEEEEeEee-ecCccEEEEEEcC--CCCCCEEEEEecCCeE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPS----SSSFTCNLKTK-VHAGAILKVVWVP--PEFGDAVACICSDGSL 82 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~-~h~~~v~~~~~~~--~~~~~~l~s~~~d~~v 82 (240)
..|.++.|+|+ +++++.|++|++|+..... ..+.+.+..+. .|.+.|.+++|+| + +.++++++.|+.|
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i 151 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVN--TEYFIWADNRGTI 151 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC-----CCEEEEEETTCCE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCC--CCEEEEEeCCCcE
Confidence 45667778887 9999999999999876210 00122233333 6778899999999 8 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEE-eeeec-ccce
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQ-AEFQN-AIDS 159 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~~~-~~~~ 159 (240)
++||++.+ ++..... .+...+.+++|+| ++.+|++|+.||.|++||+++. +.. ..+.. |...
T Consensus 152 ~~wd~~~~-------~~~~~~~~~~~~~i~~~~~~p--dg~~lasg~~dg~i~iwd~~~~------~~~~~~~~~~h~~~ 216 (343)
T 3lrv_A 152 GFQSYEDD-------SQYIVHSAKSDVEYSSGVLHK--DSLLLALYSPDGILDVYNLSSP------DQASSRFPVDEEAK 216 (343)
T ss_dssp EEEESSSS-------CEEEEECCCSSCCCCEEEECT--TSCEEEEECTTSCEEEEESSCT------TSCCEECCCCTTSC
T ss_pred EEEECCCC-------cEEEEEecCCCCceEEEEECC--CCCEEEEEcCCCEEEEEECCCC------CCCccEEeccCCCC
Confidence 99999876 5555443 3455799999999 9999999999999999999873 333 44555 6666
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE--EEEEecC
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY--AVAWALN 237 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~--~v~~sp~ 237 (240)
+. +++|+|++. +|++++ + +.|++||++........ ..+..|...+. +++|+|+
T Consensus 217 v~----------~l~fs~~g~-----~l~s~~-~-----~~v~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 217 IK----------EVKFADNGY-----WMVVEC-D-----QTVVCFDLRKDVGTLAY----PTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp EE----------EEEECTTSS-----EEEEEE-S-----SBEEEEETTSSTTCBSS----CCCBC-----CCEEEEECTT
T ss_pred EE----------EEEEeCCCC-----EEEEEe-C-----CeEEEEEcCCCCcceee----cccccccccccceEEEECCC
Confidence 66 999999987 888888 6 89999999876543222 22222333444 6999998
Q ss_pred CC
Q 026295 238 IG 239 (240)
Q Consensus 238 ~~ 239 (240)
+.
T Consensus 272 g~ 273 (343)
T 3lrv_A 272 GK 273 (343)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=6e-24 Score=164.24 Aligned_cols=180 Identities=21% Similarity=0.334 Sum_probs=144.9
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe--eecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 12 TTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT--KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
+++|+||+++ +||+|. |++|+|||+. +++++..+ .+|...|.+++|+|+ +++|++|+.|+.|++|++..
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~-----tg~~~~~~~~~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSAS-----SGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETT-----TCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTT
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECC-----CCCEEEEEEecCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCC
Confidence 4679999876 777765 8999999998 55555555 467888999999999 99999999999999999987
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccce
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCI 169 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (240)
+ +++..+.+|...+.++.+ ++..+++++.++.+++|+.... ......+..|...+.
T Consensus 99 ~-------~~~~~~~~h~~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------- 154 (318)
T 4ggc_A 99 Q-------KRLRNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVA-----EHHVATLSGHSQEVC-------- 154 (318)
T ss_dssp T-------EEEEEEECCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSS-----SCEEEEEECCSSCEE--------
T ss_pred c-------eeEEEecCccceEEEeec----CCCEEEEEecCCceEeeecCCC-----ceeEEEEcCccCceE--------
Confidence 7 888999999888876554 6678999999999999998763 344556666666665
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.+.|.+.+. +|++++.| +.|++||+.++........... .|...|.+++|+|+..
T Consensus 155 --~~~~~~~~~-----~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 155 --GLRWAPDGR-----HLASGGND-----NLVNVWPSAPGEGGWVPLQTFT---QHQGAVKAVAWCPWQS 209 (318)
T ss_dssp --EEEECTTSS-----EEEEEETT-----SCEEEEESSCBTTBSCCSEEEC---CCCSCEEEEEECTTST
T ss_pred --EEEEcCCCC-----EEEEEecC-----cceeEEECCCCcccccceeeec---ccCCceEEEEecCCCC
Confidence 889999987 89999999 9999999988765444433333 4666999999999764
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.8e-24 Score=174.44 Aligned_cols=199 Identities=8% Similarity=-0.028 Sum_probs=147.5
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEE-EEeEeeecCccEEEEEEcCC-CCCCEEEEEecCCeEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFT-CNLKTKVHAGAILKVVWVPP-EFGDAVACICSDGSLLL 84 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~d~~v~i 84 (240)
.|...|.+++|+|++++|++|+.++.|++|++.... ... ....+.+|...|.+++|+|+ ..+.+|++++.|+.|++
T Consensus 147 ~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 147 CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP--EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI 224 (450)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC--CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc--cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE
Confidence 466889999999999999999999999999997432 111 33367789999999999985 23678999999999999
Q ss_pred EEeeeccCCCcccEEEEE-eeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc--ee-
Q 026295 85 WEEIVEDAQPLQWKLCKS-FESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID--SV- 160 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~v- 160 (240)
||+..+ ..+.. +.+|...|.+++|+ ++.+|++++.|++|++||+++ +++...+..+.. .+
T Consensus 225 wd~~~~-------~~~~~~~~~h~~~v~~~~~s---d~~~l~s~~~d~~v~vwd~~~------~~~~~~~~~~~~~~~~~ 288 (450)
T 2vdu_B 225 SHYPQC-------FIVDKWLFGHKHFVSSICCG---KDYLLLSAGGDDKIFAWDWKT------GKNLSTFDYNSLIKPYL 288 (450)
T ss_dssp EEESCT-------TCEEEECCCCSSCEEEEEEC---STTEEEEEESSSEEEEEETTT------CCEEEEEECHHHHGGGC
T ss_pred EECCCC-------ceeeeeecCCCCceEEEEEC---CCCEEEEEeCCCeEEEEECCC------CcEeeeecchhhhhhhh
Confidence 999765 55555 55788999999996 788999999999999999987 455554442210 00
Q ss_pred ------------eccccccceeeeEEEeCCCCCCCCceEEEEe-cCCCCCCCeEEEEEe-ecCCCCcceeEeeecCCCCC
Q 026295 161 ------------TMFRKASCISASISWNPQKGENQGSSFVLGF-NSDTPQLNSSKVWEF-DEAHNRWLPVAELALPEDRS 226 (240)
Q Consensus 161 ------------~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~-~dd~~~~~~i~iw~~-~~~~~~~~~~~~~~~~~~h~ 226 (240)
.........+..++|+|++. +|++++ .+ +.|+||++ ......+.....+.. |
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-----~l~~~~~~d-----~~i~iw~~~~~~~~~l~~~~~~~~---~- 354 (450)
T 2vdu_B 289 NDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP-----FVAFFVEAT-----KCIIILEMSEKQKGDLALKQIITF---P- 354 (450)
T ss_dssp CTTSBC----------CBCCCEEEEEECSSSS-----EEEEEETTC-----SEEEEEEECSSSTTCEEEEEEEEC---S-
T ss_pred hhcccccccccccccccceEEEEEEEEeCCCC-----EEEEEECCC-----CeEEEEEeccCCCCceeeccEecc---C-
Confidence 00001112345899999887 888888 56 99999999 222223344445553 3
Q ss_pred CceEEEEEecC
Q 026295 227 DEVYAVAWALN 237 (240)
Q Consensus 227 ~~v~~v~~sp~ 237 (240)
..|++++|+|+
T Consensus 355 ~~v~~~~~~~~ 365 (450)
T 2vdu_B 355 YNVISLSAHND 365 (450)
T ss_dssp SCEEEEEEETT
T ss_pred CceEEEEecCC
Confidence 58999999995
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=9.9e-25 Score=182.81 Aligned_cols=193 Identities=11% Similarity=0.081 Sum_probs=153.2
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCcc-EEEEEEcC--CCCCCEEEEEecCCeE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGA-ILKVVWVP--PEFGDAVACICSDGSL 82 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~~~~l~s~~~d~~v 82 (240)
..|.+.|.+++|+|++++|++++ ++.|+||++..... ..+....+.+|... |.+++|+| + +++|++++.|+.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~-~~~~~~~~~~h~~~~v~~~~~sp~~~--~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDS-KVPPVVQFTGHGSSVVTTVKFSPIKG--SQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCC-SSCSEEEECTTTTSCEEEEEECSSTT--CCEEEEEETTSEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCC-ccccceEEecCCCceEEEEEECcCCC--CCEEEEecCCCEE
Confidence 35788999999999999999998 78999999982200 00567788899999 99999999 9 9999999999999
Q ss_pred EEEEeeeccC-CCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC----CcEEEEEecCcccccceeEEeeeeccc
Q 026295 83 LLWEEIVEDA-QPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD----GHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 83 ~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
++||+..+.. ..........+..+...|.+++|+| ++.+|++++.+ +.|.+||. .+....+..|.
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~~~~~~~~v~~~d~--------~~~~~~~~~~~ 160 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF--EGRRLCVVGEGRDNFGVFISWDS--------GNSLGEVSGHS 160 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT--TSSEEEEEECCSSCSEEEEETTT--------CCEEEECCSCS
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeC--CCCEEEEeccCCCCccEEEEEEC--------CCcceeeecCC
Confidence 9999964300 0001166777888899999999999 99999999988 68888883 34555666777
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC---ceEEEEE
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD---EVYAVAW 234 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~---~v~~v~~ 234 (240)
..+. +++|+|++.. +|++++.| +.|++||+.+.. ....+. +|.. .|++++|
T Consensus 161 ~~v~----------~~~~~~~~~~----~l~~~~~d-----~~v~vwd~~~~~----~~~~~~---~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 161 QRIN----------ACHLKQSRPM----RSMTVGDD-----GSVVFYQGPPFK----FSASDR---THHKQGSFVRDVEF 214 (615)
T ss_dssp SCEE----------EEEECSSSSC----EEEEEETT-----TEEEEEETTTBE----EEEEEC---SSSCTTCCEEEEEE
T ss_pred ccEE----------EEEECCCCCc----EEEEEeCC-----CcEEEEeCCCcc----eeeeec---ccCCCCceEEEEEE
Confidence 6666 9999999852 68999998 999999976543 333333 5777 8999999
Q ss_pred ecC-C
Q 026295 235 ALN-I 238 (240)
Q Consensus 235 sp~-~ 238 (240)
+|+ +
T Consensus 215 ~~~~~ 219 (615)
T 1pgu_A 215 SPDSG 219 (615)
T ss_dssp CSTTC
T ss_pred CCCCC
Confidence 999 5
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=1.5e-25 Score=178.91 Aligned_cols=178 Identities=12% Similarity=0.131 Sum_probs=120.1
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC--------CCCCCEEEEEecCCeEE
Q 026295 12 TTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP--------PEFGDAVACICSDGSLL 83 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~~~l~s~~~d~~v~ 83 (240)
+....+++++.+||+|+.|++|+|||...........+..+.+|.+.|++++|+| + +++|++++.|++|+
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d--~~~las~s~D~tv~ 169 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA--EQVIASVGDDCTLI 169 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE--EEEEEEEETTSEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC--CCEEEEEECCCeEE
Confidence 3334445567789999999999999997432112234455679999999999997 5 78999999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCC-cEEEEEeCCCcEEEEEecCcccccceeEEe--------eee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTS-LKLVAAYSDGHVKVYELLDPLILKNWQLQA--------EFQ 154 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--------~~~ 154 (240)
|||+... .++..+..+...|.+++|+| ++ .+|++++.|++|++||+++........... ...
T Consensus 170 ~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p--~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 170 IWRLTDE-------GPILAGYPLSSPGISVQFRP--SNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp EEEEETT-------EEEEEEEECSSCEEEEEEET--TEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred EEECCCC-------ceeeeecCCCCCcEEEEECC--CCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 9999876 77777788889999999999 76 479999999999999998743221110000 000
Q ss_pred cc-cceeeccccccceeeeEEEe-CCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 155 NA-IDSVTMFRKASCISASISWN-PQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 155 ~~-~~~v~~~~~~~~~~~~v~~~-p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
.. .........+...+.++.|. |++. .|++++.| +.+++||+....
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~-----~l~s~s~d-----~~i~vwd~~~~~ 288 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGS-----GILAMCKS-----GAWLRWNLFANN 288 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTC-----EEEEECTT-----SEEEEEEC----
T ss_pred cccceeeeecccccccceeeeeecCCCC-----EEEEEeCC-----CCEEEEECccCC
Confidence 00 00000001122244578886 6665 89999998 999999987654
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=8.2e-24 Score=171.35 Aligned_cols=182 Identities=15% Similarity=0.232 Sum_probs=131.0
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|...|.+++| ++++|++|+.|+.|++||+. +.+++..+.+|...|.++.| + +.++++++.|+.|++
T Consensus 235 ~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 235 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE-----TETCLHTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRV 303 (445)
T ss_dssp EECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG-----GTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSCEEE
T ss_pred EcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC-----CCcEeEEecCCCCceEEEEE--C--CCEEEEEeCCCeEEE
Confidence 4567777777777 56777788888888888776 55667777778888888887 4 677888888888888
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec---ccceee
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN---AIDSVT 161 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~---~~~~v~ 161 (240)
||+..+ +++..+..|...+.++.+ ++.++++++.||.|++||+++ .+....+.. +...+.
T Consensus 304 ~d~~~~-------~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 304 WDVETG-------NCIHTLTGHQSLTSGMEL----KDNILVSGNADSTVKIWDIKT------GQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp EETTTC-------CEEEEECCCCSCEEEEEE----ETTEEEEEETTSCEEEEETTT------CCEEEEECSTTSCSSCEE
T ss_pred EECCCC-------CEEEEEcCCcccEEEEEE----eCCEEEEEeCCCeEEEEECCC------CcEEEEEccCCCCCCCEE
Confidence 887665 667777777777777666 345788888888888888876 455555543 333343
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+++|++ . +|++|+.| |.|++||+.++........ ....+|...|++++|+|++
T Consensus 367 ----------~~~~~~--~-----~l~s~~~d-----g~v~iwd~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 367 ----------CLQFNK--N-----FVITSSDD-----GTVKLWDLKTGEFIRNLVT--LESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp ----------EEEECS--S-----EEEEEETT-----SEEEEEETTTCCEEEEEEE--CTTGGGTCEEEEEEECSSE
T ss_pred ----------EEEECC--C-----EEEEEeCC-----CeEEEEECCCCceeeeeec--cccCCCCceEEEEEecCCE
Confidence 888864 3 89999999 9999999987653221111 1123577899999999985
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=3.1e-24 Score=164.91 Aligned_cols=182 Identities=10% Similarity=0.050 Sum_probs=125.2
Q ss_pred cceEEEEECCC----CCEEEEEeC--------------------CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEc
Q 026295 10 KGTTSSSWNYC----GQRLATGST--------------------DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWV 65 (240)
Q Consensus 10 ~~v~~~~~s~~----~~~l~~~~~--------------------d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 65 (240)
..|++++|+|+ ++.+++++. |+.|++|++.. .++.+..+.+|...+..++|+
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~----dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE----DGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT----TSCEEEEEEECCCSSCEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC----CCceeeeeccCCCceeeEEee
Confidence 46888888888 777777663 78888888853 345666777888888888888
Q ss_pred C-CCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeecc---ccEEeEEEeecCCCcEE------------EEEeC
Q 026295 66 P-PEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTS---TQVLDVQFGVSSTSLKL------------VAAYS 129 (240)
Q Consensus 66 ~-~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l------------~~~~~ 129 (240)
+ +..+.+|++++.|++|+|||+.++ +++.++.++. ..+.+++|+| +|.++ ++|+.
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TG-------k~l~tL~g~~~~v~~v~~vafSp--dG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTG-------QLLKKMHIDDSYQASVCHKAYSE--MGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTC-------CEEEEEECCC---CCCEEEEEEE--TTEEEEEEC------------C
T ss_pred ccCCCCceEEEecCCCcEEEEECCCC-------cEEEEEcCCCcceeeeEEEEECC--CCCEEEEeccCCCcceeeccCC
Confidence 8 212789999999999999999877 8888887643 3567779999 89876 56788
Q ss_pred CCcEEEEEecCcccccceeEEeeee-----cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEE
Q 026295 130 DGHVKVYELLDPLILKNWQLQAEFQ-----NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVW 204 (240)
Q Consensus 130 dg~v~iw~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw 204 (240)
|++|++||..+ ++.+..+. +|...+. +.+++ +. ++++|+.| ++|+||
T Consensus 259 D~tIklWd~~t------gk~l~v~~~~~p~Gh~~~~l----------sg~~s--g~-----~lASgS~D-----gTIkIW 310 (356)
T 2w18_A 259 VFQLIVINPKT------TLSVGVMLYCLPPGQAGRFL----------EGDVK--DH-----CAAAILTS-----GTIAIW 310 (356)
T ss_dssp CEEEEEEETTT------TEEEEEEEECCCTTCCCCEE----------EEEEE--TT-----EEEEEETT-----SCEEEE
T ss_pred CcEEEEEECCC------CEEEEEEEeeccCCCcceeE----------ccccC--CC-----EEEEEcCC-----CcEEEE
Confidence 99999999987 34433321 1211111 22333 33 78888888 999999
Q ss_pred EeecCCCCcceeEeeecCCCCCCceE-EEEEecCCC
Q 026295 205 EFDEAHNRWLPVAELALPEDRSDEVY-AVAWALNIG 239 (240)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~ 239 (240)
|+.+++. ...+. +|...+. .++||||+.
T Consensus 311 Dl~tGk~----l~tL~---gH~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 311 DLLLGQC----TALLP---PVSDQHWSFVKWSGTDS 339 (356)
T ss_dssp ETTTCSE----EEEEC---CC--CCCCEEEECSSSS
T ss_pred ECCCCcE----EEEec---CCCCCeEEEEEECCCCC
Confidence 9988653 33344 4666655 589999974
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=3.8e-23 Score=167.45 Aligned_cols=179 Identities=17% Similarity=0.286 Sum_probs=120.7
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
+..|...|.+++|+ +++|++|+.|+.|++||+. +.+.+..+.+|...|.++.| + +.++++++.|+.|++
T Consensus 195 ~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~-----~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 195 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE-----TGQCLHVLMGHVAAVRCVQY--D--GRRVVSGAYDFMVKV 263 (445)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS-----SCCEEEEEECCSSCEEEEEE--C--SSCEEEEETTSCEEE
T ss_pred ECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC-----CCcEEEEEcCCcccEEEEEE--C--CCEEEEEcCCCEEEE
Confidence 44566666666663 4556666666666666665 33455566666667777766 3 566667777777777
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
||+..+ +++..+..|...|.+++| ++.++++++.||.|++||+++ .+....+..+...+.
T Consensus 264 wd~~~~-------~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~v~--- 323 (445)
T 2ovr_B 264 WDPETE-------TCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVET------GNCIHTLTGHQSLTS--- 323 (445)
T ss_dssp EEGGGT-------EEEEEECCCSSCEEEEEE----CSSEEEEEETTSCEEEEETTT------CCEEEEECCCCSCEE---
T ss_pred EECCCC-------cEeEEecCCCCceEEEEE----CCCEEEEEeCCCeEEEEECCC------CCEEEEEcCCcccEE---
Confidence 776555 666667777777777776 556677777777777777766 455555555544443
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
++.++ +. +|++|+.| +.|++||+.++. ....+..+..|...|++++|+++
T Consensus 324 -------~~~~~--~~-----~l~~~~~d-----g~i~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~ 373 (445)
T 2ovr_B 324 -------GMELK--DN-----ILVSGNAD-----STVKIWDIKTGQ----CLQTLQGPNKHQSAVTCLQFNKN 373 (445)
T ss_dssp -------EEEEE--TT-----EEEEEETT-----SCEEEEETTTCC----EEEEECSTTSCSSCEEEEEECSS
T ss_pred -------EEEEe--CC-----EEEEEeCC-----CeEEEEECCCCc----EEEEEccCCCCCCCEEEEEECCC
Confidence 55554 33 79999998 999999997654 34455555568889999999763
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-24 Score=177.39 Aligned_cols=189 Identities=11% Similarity=0.142 Sum_probs=135.3
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCC--C----------------------cEEEEeEee-ecCccEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSS--S----------------------SFTCNLKTK-VHAGAIL 60 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~----------------------~~~~~~~~~-~h~~~v~ 60 (240)
++....|.+++|+|||+++|+++.|++|+ |...... + +.+....+. .|...|.
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 45667999999999999999999999996 4321100 0 001001111 4577899
Q ss_pred EEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccc-----cEEeEEEeecCCCcEEEEEeCCCcEEE
Q 026295 61 KVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTST-----QVLDVQFGVSSTSLKLVAAYSDGHVKV 135 (240)
Q Consensus 61 ~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg~v~i 135 (240)
+++|+|+ |.+|++++.||.|++||.. .++..+. |.. .|.+++|+| +|++|++|+.||+|++
T Consensus 90 ~vawSPd--G~~LAs~s~dg~V~iwd~~---------~~l~~l~-~~~~~~~~sv~svafSP--DG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 90 VCKPSPI--DDWMAVLSNNGNVSVFKDN---------KMLTNLD-SKGNLSSRTYHCFEWNP--IESSIVVGNEDGELQF 155 (588)
T ss_dssp EEEECSS--SSCEEEEETTSCEEEEETT---------EEEEECC-CSSCSTTTCEEEEEECS--SSSCEEEEETTSEEEE
T ss_pred EEEECCC--CCEEEEEeCCCcEEEEeCC---------ceeeecc-CCCccccccEEEEEEcC--CCCEEEEEcCCCEEEE
Confidence 9999999 9999999999999999953 3555566 544 599999999 9999999999999999
Q ss_pred EEecCccc-ccceeEEeee----ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 136 YELLDPLI-LKNWQLQAEF----QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 136 w~~~~~~~-~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
||+.+... ..++-....+ .+|..+|. +++|+|++ +++++.| +.|++|++....
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~----------sVawSPdg-------Laass~D-----~tVrlWd~~~~~ 213 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVT----------HIVWYEDV-------LVAALSN-----NSVFSMTVSASS 213 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEE----------EEEEETTE-------EEEEETT-----CCEEEECCCSSS
T ss_pred EECCCCccccccceeeeeeecccccccccEE----------EEEEcCCc-------EEEEeCC-----CeEEEEECCCCc
Confidence 99986210 0011134454 33444555 99999975 6778888 999999998765
Q ss_pred CCcceeEeeecCCCCCCceEEEEEe
Q 026295 211 NRWLPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 211 ~~~~~~~~~~~~~~h~~~v~~v~~s 235 (240)
.. .....+. .+|...|.+|+|+
T Consensus 214 ~~-~~~~tL~--~~h~~~V~svaFs 235 (588)
T 2j04_A 214 HQ-PVSRMIQ--NASRRKITDLKIV 235 (588)
T ss_dssp SC-CCEEEEE--CCCSSCCCCEEEE
T ss_pred cc-cceeeec--ccccCcEEEEEEE
Confidence 22 1112231 1466799999998
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=5.1e-23 Score=166.32 Aligned_cols=179 Identities=15% Similarity=0.238 Sum_probs=146.3
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
.+..|.+.|.+++| ++++|++|+.||.|++||+. +.+.+..+.+|...|.+++|+ +.++++++.|+.|+
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~-----~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~ 236 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN-----TGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIA 236 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-----SCCEEEEECCCCSCEEEEECC----TTEEEEEETTSCEE
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-----CCcEEEEEcCCCCcEEEEEEc----CCEEEEeeCCCcEE
Confidence 46679999999998 78899999999999999998 557788888999999999994 45899999999999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+||+..... ......+.+|...|.+++| ++.++++++.||.|++||+++ .+....+..|...+.
T Consensus 237 vwd~~~~~~----~~~~~~~~~~~~~v~~~~~----~~~~l~s~~~dg~i~vwd~~~------~~~~~~~~~~~~~v~-- 300 (435)
T 1p22_A 237 VWDMASPTD----ITLRRVLVGHRAAVNVVDF----DDKYIVSASGDRTIKVWNTST------CEFVRTLNGHKRGIA-- 300 (435)
T ss_dssp EEECSSSSC----CEEEEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTT------CCEEEEEECCSSCEE--
T ss_pred EEeCCCCCC----ceeeeEecCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCc------CcEEEEEcCCCCcEE--
Confidence 999976521 2344667788999999998 567899999999999999987 567777777776666
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEec
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 236 (240)
++.|++ . +|++|+.| +.|++||++++. ....+. +|...|++++|++
T Consensus 301 --------~~~~~~--~-----~l~~g~~d-----g~i~iwd~~~~~----~~~~~~---~h~~~v~~~~~~~ 346 (435)
T 1p22_A 301 --------CLQYRD--R-----LVVSGSSD-----NTIRLWDIECGA----CLRVLE---GHEELVRCIRFDN 346 (435)
T ss_dssp --------EEEEET--T-----EEEEEETT-----SCEEEEETTTCC----EEEEEC---CCSSCEEEEECCS
T ss_pred --------EEEeCC--C-----EEEEEeCC-----CeEEEEECCCCC----EEEEEe---CCcCcEEEEEecC
Confidence 788853 3 89999999 999999998754 233333 5777999999943
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=6.1e-23 Score=165.83 Aligned_cols=176 Identities=17% Similarity=0.313 Sum_probs=142.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWE 86 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd 86 (240)
.|...|.+++| ++++|++|+.||.|++||+. +.+.+..+.+|.+.|.+++| + +.++++++.||.|++||
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~-----~~~~~~~~~~h~~~v~~l~~--~--~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN-----TLECKRILTGHTGSVLCLQY--D--ERVIITGSSDSTVRVWD 199 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESS-----SCCEEEEECCCSSCEEEEEC--C--SSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC-----CCeEEEEEcCCCCcEEEEEE--C--CCEEEEEcCCCeEEEEE
Confidence 35567888876 79999999999999999998 56778889999999999999 5 78999999999999999
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (240)
+..+ +.+..+..|...|.+++|++ .++++++.||.|++||+++... ......+..|...+.
T Consensus 200 ~~~~-------~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~vwd~~~~~~---~~~~~~~~~~~~~v~----- 260 (435)
T 1p22_A 200 VNTG-------EMLNTLIHHCEAVLHLRFNN----GMMVTCSKDRSIAVWDMASPTD---ITLRRVLVGHRAAVN----- 260 (435)
T ss_dssp SSSC-------CEEEEECCCCSCEEEEECCT----TEEEEEETTSCEEEEECSSSSC---CEEEEEECCCSSCEE-----
T ss_pred CCCC-------cEEEEEcCCCCcEEEEEEcC----CEEEEeeCCCcEEEEeCCCCCC---ceeeeEecCCCCcEE-----
Confidence 9876 78888999999999999953 4799999999999999986321 122244556665555
Q ss_pred cceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEec
Q 026295 167 SCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 167 ~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 236 (240)
+++| ++. +|++|+.| +.|++||+.+.. ....+. +|...|.+++|++
T Consensus 261 -----~~~~--~~~-----~l~s~~~d-----g~i~vwd~~~~~----~~~~~~---~~~~~v~~~~~~~ 306 (435)
T 1p22_A 261 -----VVDF--DDK-----YIVSASGD-----RTIKVWNTSTCE----FVRTLN---GHKRGIACLQYRD 306 (435)
T ss_dssp -----EEEE--ETT-----EEEEEETT-----SEEEEEETTTCC----EEEEEE---CCSSCEEEEEEET
T ss_pred -----EEEe--CCC-----EEEEEeCC-----CeEEEEECCcCc----EEEEEc---CCCCcEEEEEeCC
Confidence 8888 333 89999999 999999998754 333334 5777999999965
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=164.86 Aligned_cols=170 Identities=19% Similarity=0.210 Sum_probs=133.4
Q ss_pred chhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEE--cCCCCCCEEEEEecCC
Q 026295 3 KAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVW--VPPEFGDAVACICSDG 80 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~l~s~~~d~ 80 (240)
..+..|.+.|.+++|+|++++|++++.||.|++||+. +.+.+. +..|...|.+++| +++ +.+|++++.|+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-----~~~~~~-~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg 151 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS-----SNQAIQ-IAQHDAPVKTIHWIKAPN--YSCVMTGSWDK 151 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----TTEEEE-EEECSSCEEEEEEEECSS--CEEEEEEETTS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC-----CCCcee-eccccCceEEEEEEeCCC--CCEEEEccCCC
Confidence 3466799999999999999999999999999999998 334444 5679999999999 777 89999999999
Q ss_pred eEEEEEeeeccCC------C-----------------------------------------c-----------c------
Q 026295 81 SLLLWEEIVEDAQ------P-----------------------------------------L-----------Q------ 96 (240)
Q Consensus 81 ~v~iwd~~~~~~~------~-----------------------------------------~-----------~------ 96 (240)
.|++||++.+... . . .
T Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 152 TLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp EEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 9999997653210 0 0 0
Q ss_pred -----------c--------EEEEEeeeccc------------cEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccc
Q 026295 97 -----------W--------KLCKSFESTST------------QVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILK 145 (240)
Q Consensus 97 -----------~--------~~~~~~~~~~~------------~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~ 145 (240)
| .....+..|.. .|.+++|+| ++.+|++++.||.|++||+.+
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~s~~~dg~i~iwd~~~----- 304 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP--VHGTLATVGSDGRFSFWDKDA----- 304 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT--TTCCEEEEETTSCEEEEETTT-----
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec--CCCEEEEEccCCeEEEEECCC-----
Confidence 0 00112222333 699999999 999999999999999999987
Q ss_pred ceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 146 NWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.+++..+..|...+. +++|+|++. +|++|+.| +..+.|++..
T Consensus 305 -~~~~~~~~~~~~~v~----------~~~~s~~g~-----~l~~~s~d-----~~~~~~~~~~ 346 (368)
T 3mmy_A 305 -RTKLKTSEQLDQPIS----------ACCFNHNGN-----IFAYASSY-----DWSKGHEFYN 346 (368)
T ss_dssp -TEEEEECCCCSSCEE----------EEEECTTSS-----CEEEEECC-----CSTTCGGGCC
T ss_pred -CcEEEEecCCCCCce----------EEEECCCCC-----eEEEEecc-----cccccccccC
Confidence 577777777777776 999999998 89999988 6666555443
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.9e-23 Score=163.10 Aligned_cols=204 Identities=15% Similarity=0.084 Sum_probs=144.6
Q ss_pred hhcc--cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCc----EEEEeEeeecCccEEEEEEcCCCCCCEEEEEe
Q 026295 4 AVAT--LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSS----FTCNLKTKVHAGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 4 ~~~~--h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
.+.. |...|.+++|+| +++|++++.|+.|++||+....... .+++..+. |...|.+++|+|+ + +++++
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~--l~~~~ 167 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS--R--LIVGM 167 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS--E--EEEEE
T ss_pred eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC--c--EEEEe
Confidence 3556 999999999999 9999999999999999987200000 44555555 8899999999887 5 88999
Q ss_pred cCCeEEEEEeee-ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecc
Q 026295 78 SDGSLLLWEEIV-EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNA 156 (240)
Q Consensus 78 ~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 156 (240)
.|+.|++||++. ... ........+...+.+++|+|. ++.++++++.||.|++|++.........+....+..+
T Consensus 168 ~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDD-----NGTIEESGLKYQIRDVALLPK-EQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp STTEEEEEESSCCTTC-----CCEEEECSCSSCEEEEEECSG-GGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred CCCeEEEEECCccccc-----cceeeecCCCCceeEEEECCC-CCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 999999999976 321 222333456788999999751 4678999999999999999763111001333444444
Q ss_pred cceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCC-CCceEEEEEe
Q 026295 157 IDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDR-SDEVYAVAWA 235 (240)
Q Consensus 157 ~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s 235 (240)
..... ...+...+.+++|+|++. +|++++.| +.|++||+.+.. ....+. +| ..+|++++
T Consensus 242 ~~~~~-~~~~~~~i~~~~~s~~~~-----~l~~~~~d-----g~i~vwd~~~~~----~~~~~~---~~h~~~v~~~~-- 301 (342)
T 1yfq_A 242 RLNLK-DTNLAYPVNSIEFSPRHK-----FLYTAGSD-----GIISCWNLQTRK----KIKNFA---KFNEDSVVKIA-- 301 (342)
T ss_dssp CCCTT-CCSSCCCEEEEEECTTTC-----CEEEEETT-----SCEEEEETTTTE----EEEECC---CCSSSEEEEEE--
T ss_pred ccccc-ccccceeEEEEEEcCCCC-----EEEEecCC-----ceEEEEcCccHh----Hhhhhh---cccCCCceEec--
Confidence 33000 001112334999999987 89999998 999999987654 233333 45 77999999
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
|++.
T Consensus 302 ~~~~ 305 (342)
T 1yfq_A 302 CSDN 305 (342)
T ss_dssp ECSS
T ss_pred CCCC
Confidence 7763
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=8.3e-23 Score=164.99 Aligned_cols=192 Identities=14% Similarity=0.169 Sum_probs=137.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCC------CC--CcEE---EEeEeeecCccEEEEEEcCCCCCCEEE----
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDP------SS--SSFT---CNLKTKVHAGAILKVVWVPPEFGDAVA---- 74 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~------~~--~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~l~---- 74 (240)
..+..+++++++.++++++.++ ++||+.... .. .... .... ..+...|.+++|+|+ +++|+
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spd--g~~lav~~~ 112 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCD--NLTLSACMM 112 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTT--SCEEEEEEE
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCC--CCEEEEEEe
Confidence 3588899999999999999988 888875310 00 0000 0011 135678999999999 99999
Q ss_pred EEecCCeEEEEEeeeccC----CCcccEEEEEeeeccccEEeEEEeecCC-CcEEEEEeCCCcEEEEEecCcccccceeE
Q 026295 75 CICSDGSLLLWEEIVEDA----QPLQWKLCKSFESTSTQVLDVQFGVSST-SLKLVAAYSDGHVKVYELLDPLILKNWQL 149 (240)
Q Consensus 75 s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 149 (240)
+++.|+.|++||+..... ....+..+..+.+|...|.+++|+| + +.+|++++.||+|++||+++ ...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p--~~~~~las~s~Dg~v~iwD~~~------~~~ 184 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNP--TVPSMVAVCLADGSIAVLQVTE------TVK 184 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECS--SCTTEEEEEETTSCEEEEEESS------SEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECC--CCCCEEEEEECCCeEEEEEcCC------Ccc
Confidence 788899999999875310 0011233556667899999999999 6 78899999999999999987 333
Q ss_pred EeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC----CCC
Q 026295 150 QAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP----EDR 225 (240)
Q Consensus 150 ~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~----~~h 225 (240)
......|...+. +++|+|++. +|++|+.| +.|++||.+ ... ...+..+ .+|
T Consensus 185 ~~~~~~~~~~v~----------~v~wspdg~-----~lasgs~d-----g~v~iwd~~-~~~----~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 185 VCATLPSTVAVT----------SVCWSPKGK-----QLAVGKQN-----GTVVQYLPT-LQE----KKVIPCPPFYESDH 239 (434)
T ss_dssp EEEEECGGGCEE----------EEEECTTSS-----CEEEEETT-----SCEEEECTT-CCE----EEEECCCTTCCTTS
T ss_pred eeeccCCCCcee----------EEEEcCCCC-----EEEEEcCC-----CcEEEEccC-Ccc----cccccCCcccCCCC
Confidence 333344555555 999999987 89999998 999999987 221 1222222 124
Q ss_pred CCceEEEEEecCC
Q 026295 226 SDEVYAVAWALNI 238 (240)
Q Consensus 226 ~~~v~~v~~sp~~ 238 (240)
...|.+++|+|+.
T Consensus 240 ~~~v~~v~w~~~~ 252 (434)
T 2oit_A 240 PVRVLDVLWIGTY 252 (434)
T ss_dssp CEEEEEEEEEETT
T ss_pred ceeEEEEEEecCc
Confidence 4589999999874
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=1.2e-21 Score=157.77 Aligned_cols=184 Identities=9% Similarity=0.057 Sum_probs=143.1
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEE
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLL 83 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~ 83 (240)
+..|.+.|.+++|+++++++++++.|+.|++||+. +.+.+..+..|...+.+++|+|+ +..++ +++.|+.|+
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~ 237 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-----TLAYKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDIS 237 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----TCCEEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-----CceEEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEE
Confidence 45788899999999999999999999999999998 55677778888899999999999 88775 455799999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe--------CCCcEEEEEecCcccccceeEEeeeec
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY--------SDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
+||+..+ +.+..+..+ ..+.+++|+| ++.++++++ .|+.|++||+++ .+....+ .
T Consensus 238 ~~d~~~~-------~~~~~~~~~-~~~~~~~~~~--~g~~l~~~~~~~~~~~~~dg~i~~~d~~~------~~~~~~~-~ 300 (433)
T 3bws_A 238 VIDRKTK-------LEIRKTDKI-GLPRGLLLSK--DGKELYIAQFSASNQESGGGRLGIYSMDK------EKLIDTI-G 300 (433)
T ss_dssp EEETTTT-------EEEEECCCC-SEEEEEEECT--TSSEEEEEEEESCTTCSCCEEEEEEETTT------TEEEEEE-E
T ss_pred EEECCCC-------cEEEEecCC-CCceEEEEcC--CCCEEEEEECCCCccccCCCeEEEEECCC------CcEEeec-c
Confidence 9999765 666666654 5589999999 998888887 588999999986 3443333 2
Q ss_pred ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe
Q 026295 156 AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 156 ~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 235 (240)
+...+. .++|+|++. .++++++.+ +.|++||+.+.. ....+. +...+.+++|+
T Consensus 301 ~~~~~~----------~~~~~~~g~----~l~~~~~~~-----~~v~v~d~~~~~----~~~~~~----~~~~~~~~~~s 353 (433)
T 3bws_A 301 PPGNKR----------HIVSGNTEN----KIYVSDMCC-----SKIEVYDLKEKK----VQKSIP----VFDKPNTIALS 353 (433)
T ss_dssp EEECEE----------EEEECSSTT----EEEEEETTT-----TEEEEEETTTTE----EEEEEE----CSSSEEEEEEC
T ss_pred CCCCcc----------eEEECCCCC----EEEEEecCC-----CEEEEEECCCCc----EEEEec----CCCCCCeEEEc
Confidence 222333 789999985 145565666 999999987643 223332 45589999999
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
|++.
T Consensus 354 ~dg~ 357 (433)
T 3bws_A 354 PDGK 357 (433)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9974
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=7.2e-22 Score=159.51 Aligned_cols=177 Identities=12% Similarity=0.080 Sum_probs=126.4
Q ss_pred cccceEEEEECCCCCEEE----EEeCCCcEEEEeCCCC-----CC-CcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe
Q 026295 8 LDKGTTSSSWNYCGQRLA----TGSTDGTLSIFDSPDP-----SS-SSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~----~~~~d~~i~iw~~~~~-----~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
|...|.+++|+|+|++|+ +|+.|+.|+|||+... .. .....+..+.+|...|.+++|+|+ .+.+|++++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~-~~~~las~s 169 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT-VPSMVAVCL 169 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS-CTTEEEEEE
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC-CCCEEEEEE
Confidence 456799999999999999 7889999999998521 00 012235566789999999999996 268899999
Q ss_pred cCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc
Q 026295 78 SDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 78 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
.|++|++||++.+ ........|...|.+++|+| +|.+|++++.||+|++||++. +....+..+.
T Consensus 170 ~Dg~v~iwD~~~~-------~~~~~~~~~~~~v~~v~wsp--dg~~lasgs~dg~v~iwd~~~-------~~~~~~~~~~ 233 (434)
T 2oit_A 170 ADGSIAVLQVTET-------VKVCATLPSTVAVTSVCWSP--KGKQLAVGKQNGTVVQYLPTL-------QEKKVIPCPP 233 (434)
T ss_dssp TTSCEEEEEESSS-------EEEEEEECGGGCEEEEEECT--TSSCEEEEETTSCEEEECTTC-------CEEEEECCCT
T ss_pred CCCeEEEEEcCCC-------cceeeccCCCCceeEEEEcC--CCCEEEEEcCCCcEEEEccCC-------cccccccCCc
Confidence 9999999999875 55556667888999999999 999999999999999999872 2222222221
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCC--CCeEEEEEeecC
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ--LNSSKVWEFDEA 209 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~--~~~i~iw~~~~~ 209 (240)
.. ...+...+.+++|+++.. ++++....|+.. ...+++|++...
T Consensus 234 ~~---~~~~~~~v~~v~w~~~~~-----~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 234 FY---ESDHPVRVLDVLWIGTYV-----FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TC---CTTSCEEEEEEEEEETTE-----EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cc---CCCCceeEEEEEEecCce-----EEEEEccCCCccCCCCceEEEEeccC
Confidence 10 001112344899999774 454433322100 024899999765
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.2e-21 Score=154.28 Aligned_cols=166 Identities=16% Similarity=0.192 Sum_probs=117.9
Q ss_pred CEEEE--EeCCCcEEEEeCCCCCC----------CcEEE-EeEeeecCccEEEEEEcCCCCCCEEEEEecCCe-EEEEEe
Q 026295 22 QRLAT--GSTDGTLSIFDSPDPSS----------SSFTC-NLKTKVHAGAILKVVWVPPEFGDAVACICSDGS-LLLWEE 87 (240)
Q Consensus 22 ~~l~~--~~~d~~i~iw~~~~~~~----------~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~-v~iwd~ 87 (240)
.+++. |+.||.|++||+..... ....+ +..+.+|.+.|.+++|+|+ +.+|++++.|++ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~--g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK--SDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT--SSEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC--CCEEEEEeCCCCEEEEEEC
Confidence 45555 57889999999873210 00012 6778899999999999999 999999999998 999999
Q ss_pred eeccCCCcccEEEEEee-e-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-ecccc------
Q 026295 88 IVEDAQPLQWKLCKSFE-S-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAID------ 158 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~------ 158 (240)
+.+ +++..+. + |...|.+++|+| ++.+|++++.|++|++||++.+.......+...+ .....
T Consensus 226 ~~~-------~~~~~~~~g~h~~~v~~~~~s~--~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 226 EDG-------VLVREFRRGLDRADVVDMKWST--DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp TTC-------CEEEEEECTTCCSCEEEEEECT--TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred CCC-------cEEEEEEcCCCCCcEEEEEECC--CCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 876 7888888 4 889999999999 9999999999999999999764221111000000 00000
Q ss_pred --eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 159 --SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 159 --~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
.+... .......++|+|++. +|++++.| |.+++|++....
T Consensus 297 ~~~~~~~--~~~~~~~~a~~~d~~-----~l~~~~~d-----g~~~~~~~~~~~ 338 (355)
T 3vu4_A 297 NFKLSVD--KHVRGCKIAWISESS-----LVVVWPHT-----RMIETFKVVFDD 338 (355)
T ss_dssp EEECCCC--TTCCCCEEEESSSSE-----EEEEETTT-----TEEEEEEEEEET
T ss_pred EEEeccC--CCCCceEEEEeCCCC-----EEEEEeCC-----CeEEEEEEEcCC
Confidence 00000 000113689999987 89999888 999999997654
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=6.5e-21 Score=151.54 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=135.8
Q ss_pred ccceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEE-EecCCeEEEEE
Q 026295 9 DKGTTSSSWNYCGQRL-ATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVAC-ICSDGSLLLWE 86 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s-~~~d~~v~iwd 86 (240)
...+.+++|+|++++| ++++.|+.|++||+. +.+.+..+..+. .+.+++|+|+ +++++. +..++.|++||
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-----~~~~~~~~~~~~-~v~~~~~spd--g~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA-----TNNVIATVPAGS-SPQGVAVSPD--GKQVYVTNMASSTLSVID 102 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETT-----TTEEEEEEECSS-SEEEEEECTT--SSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECC-----CCeEEEEEECCC-CccceEECCC--CCEEEEEECCCCEEEEEE
Confidence 3468999999999976 677789999999998 556777776554 8999999999 887754 44679999999
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEE-EEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKL-VAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
+..+ +.+..+..+ ..+.+++|+| ++.++ ++++.++.|++||+.+ .+....+..+.. +.
T Consensus 103 ~~~~-------~~~~~~~~~-~~~~~~~~s~--dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~~-~~---- 161 (391)
T 1l0q_A 103 TTSN-------TVAGTVKTG-KSPLGLALSP--DGKKLYVTNNGDKTVSVINTVT------KAVINTVSVGRS-PK---- 161 (391)
T ss_dssp TTTT-------EEEEEEECS-SSEEEEEECT--TSSEEEEEETTTTEEEEEETTT------TEEEEEEECCSS-EE----
T ss_pred CCCC-------eEEEEEeCC-CCcceEEECC--CCCEEEEEeCCCCEEEEEECCC------CcEEEEEecCCC-cc----
Confidence 9876 666666644 5789999999 88876 6778899999999987 455555544322 23
Q ss_pred ccceeeeEEEeCCCCCCCCceE-EEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 166 ASCISASISWNPQKGENQGSSF-VLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l-~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+|++. .| ++++.+ +.|++||+.+.. ....+. +...+.+++|+|++.
T Consensus 162 ------~~~~~~dg~-----~l~~~~~~~-----~~v~~~d~~~~~----~~~~~~----~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 162 ------GIAVTPDGT-----KVYVANFDS-----MSISVIDTVTNS----VIDTVK----VEAAPSGIAVNPEGT 212 (391)
T ss_dssp ------EEEECTTSS-----EEEEEETTT-----TEEEEEETTTTE----EEEEEE----CSSEEEEEEECTTSS
T ss_pred ------eEEECCCCC-----EEEEEeCCC-----CEEEEEECCCCe----EEEEEe----cCCCccceEECCCCC
Confidence 899999986 55 555666 999999987653 222332 445899999999974
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=1.5e-21 Score=157.18 Aligned_cols=179 Identities=6% Similarity=-0.048 Sum_probs=139.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEe-----EeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNL-----KTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
..+.+++|+|++.++++++.++.|++||+. +++... .+.+|.+.|.+++|+++ +.++++++.|+.|++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~-----~g~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDIN-----SGQTVRLSPPEKYKKKLGFVETISIPEH--NELWVSQMQANAVHV 195 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETT-----TCCEEEECCCHHHHTTCCEEEEEEEGGG--TEEEEEEGGGTEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECC-----CCeEeeecCcccccccCCceeEEEEcCC--CEEEEEECCCCEEEE
Confidence 456789999977888888889999999998 334444 34478889999999988 999999999999999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEE-EeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVA-AYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
||+..+ +.+..+..+...+.+++|+| ++.++++ ++.|+.|++||+++ .+....+..+. .+.
T Consensus 196 ~d~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~~~d~~~------~~~~~~~~~~~-~~~-- 257 (433)
T 3bws_A 196 FDLKTL-------AYKATVDLTGKWSKILLYDP--IRDLVYCSNWISEDISVIDRKT------KLEIRKTDKIG-LPR-- 257 (433)
T ss_dssp EETTTC-------CEEEEEECSSSSEEEEEEET--TTTEEEEEETTTTEEEEEETTT------TEEEEECCCCS-EEE--
T ss_pred EECCCc-------eEEEEEcCCCCCeeEEEEcC--CCCEEEEEecCCCcEEEEECCC------CcEEEEecCCC-Cce--
Confidence 999765 67777878888999999999 8887754 44799999999986 45444443322 233
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEec--------CCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFN--------SDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~--------dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 235 (240)
.++|+|++. +|++++. | +.|++||+.++.. ...+ .|...+.+++|+
T Consensus 258 --------~~~~~~~g~-----~l~~~~~~~~~~~~~d-----g~i~~~d~~~~~~----~~~~----~~~~~~~~~~~~ 311 (433)
T 3bws_A 258 --------GLLLSKDGK-----ELYIAQFSASNQESGG-----GRLGIYSMDKEKL----IDTI----GPPGNKRHIVSG 311 (433)
T ss_dssp --------EEEECTTSS-----EEEEEEEESCTTCSCC-----EEEEEEETTTTEE----EEEE----EEEECEEEEEEC
T ss_pred --------EEEEcCCCC-----EEEEEECCCCccccCC-----CeEEEEECCCCcE----Eeec----cCCCCcceEEEC
Confidence 899999987 7777773 5 8999999976532 2222 244478999999
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
|++.
T Consensus 312 ~~g~ 315 (433)
T 3bws_A 312 NTEN 315 (433)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 9874
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=2.8e-20 Score=149.51 Aligned_cols=185 Identities=12% Similarity=0.044 Sum_probs=134.5
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecC
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDG---TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSD 79 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d 79 (240)
.+..|.+.|.+++|+|+|++|++++.++ .|++||+.. .+.. .+..|...+.+++|+|+ |+.|+ +++.+
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-----g~~~-~l~~~~~~~~~~~~spd--g~~la~~~~~~ 244 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-----GAVR-QVASFPRHNGAPAFSPD--GSKLAFALSKT 244 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-----CCEE-EEECCSSCEEEEEECTT--SSEEEEEECTT
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-----CcEE-EeecCCCcccCEEEcCC--CCEEEEEEecC
Confidence 4567888999999999999999999885 999999983 3333 45667889999999999 99777 66666
Q ss_pred Ce--EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC-CC--cEEEEEecCcccccceeEEeeee
Q 026295 80 GS--LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS-DG--HVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 80 ~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-dg--~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
+. |.+||+..+ + ...+..+...+..++|+| +|.+|++++. ++ .|.+||+.+ .+. ..+.
T Consensus 245 g~~~i~~~d~~~~-------~-~~~l~~~~~~~~~~~~sp--dg~~l~~~s~~~g~~~i~~~d~~~------~~~-~~l~ 307 (415)
T 2hqs_A 245 GSLNLYVMDLASG-------Q-IRQVTDGRSNNTEPTWFP--DSQNLAFTSDQAGRPQVYKVNING------GAP-QRIT 307 (415)
T ss_dssp SSCEEEEEETTTC-------C-EEECCCCSSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTS------SCC-EECC
T ss_pred CCceEEEEECCCC-------C-EEeCcCCCCcccceEECC--CCCEEEEEECCCCCcEEEEEECCC------CCE-EEEe
Confidence 54 888998654 3 355666778899999999 9998888876 45 566667765 221 2222
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAW 234 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 234 (240)
.+...+. .++|+|++. +|++++.+++. ..|++||+.++.. ..+. .|. .+.+++|
T Consensus 308 ~~~~~~~----------~~~~spdG~-----~l~~~~~~~g~--~~i~~~d~~~~~~-----~~l~---~~~-~~~~~~~ 361 (415)
T 2hqs_A 308 WEGSQNQ----------DADVSSDGK-----FMVMVSSNGGQ--QHIAKQDLATGGV-----QVLS---STF-LDETPSL 361 (415)
T ss_dssp CSSSEEE----------EEEECTTSS-----EEEEEEECSSC--EEEEEEETTTCCE-----EECC---CSS-SCEEEEE
T ss_pred cCCCccc----------CeEECCCCC-----EEEEEECcCCc--eEEEEEECCCCCE-----EEec---CCC-CcCCeEE
Confidence 2333333 789999997 78887764200 4899999876542 1222 233 8999999
Q ss_pred ecCCC
Q 026295 235 ALNIG 239 (240)
Q Consensus 235 sp~~~ 239 (240)
+||+.
T Consensus 362 spdg~ 366 (415)
T 2hqs_A 362 APNGT 366 (415)
T ss_dssp CTTSS
T ss_pred cCCCC
Confidence 99974
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.86 E-value=2.3e-19 Score=142.64 Aligned_cols=178 Identities=12% Similarity=0.117 Sum_probs=134.5
Q ss_pred ccceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEE-EEEecCCeEEEEE
Q 026295 9 DKGTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAV-ACICSDGSLLLWE 86 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~d~~v~iwd 86 (240)
...+.+++|+|++++|+.+ +.++.|++||+. +.+.+..+..+ ..+.+++|+|+ ++.+ ++++.|+.|++||
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~-----~~~~~~~~~~~-~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT-----SNTVAGTVKTG-KSPLGLALSPD--GKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETT-----TTEEEEEEECS-SSEEEEEECTT--SSEEEEEETTTTEEEEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECC-----CCeEEEEEeCC-CCcceEEECCC--CCEEEEEeCCCCEEEEEE
Confidence 3489999999999987554 467999999998 45666666654 56899999999 8876 6778899999999
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEE-EEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKL-VAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
+..+ +.+..+..+ ..+..++|+| ++.++ ++++.++.|++||+++ .+....+.. ...+.
T Consensus 145 ~~~~-------~~~~~~~~~-~~~~~~~~~~--dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~-~~~~~---- 203 (391)
T 1l0q_A 145 TVTK-------AVINTVSVG-RSPKGIAVTP--DGTKVYVANFDSMSISVIDTVT------NSVIDTVKV-EAAPS---- 203 (391)
T ss_dssp TTTT-------EEEEEEECC-SSEEEEEECT--TSSEEEEEETTTTEEEEEETTT------TEEEEEEEC-SSEEE----
T ss_pred CCCC-------cEEEEEecC-CCcceEEECC--CCCEEEEEeCCCCEEEEEECCC------CeEEEEEec-CCCcc----
Confidence 9766 666666654 5668999999 88876 5777889999999987 344444432 22333
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEe---cCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGF---NSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~---~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+++|+|++. +|++++ .+ +.|++||+.+.. ....+.. | ..+.+++|+||+.
T Consensus 204 ------~~~~~~~g~-----~l~~~~~~~~~-----~~v~~~d~~~~~----~~~~~~~---~-~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 204 ------GIAVNPEGT-----KAYVTNVDKYF-----NTVSMIDTGTNK----ITARIPV---G-PDPAGIAVTPDGK 256 (391)
T ss_dssp ------EEEECTTSS-----EEEEEEECSSC-----CEEEEEETTTTE----EEEEEEC---C-SSEEEEEECTTSS
T ss_pred ------ceEECCCCC-----EEEEEecCcCC-----CcEEEEECCCCe----EEEEEec---C-CCccEEEEccCCC
Confidence 899999987 777777 45 999999987653 2333332 2 2589999999974
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=1.7e-19 Score=144.90 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=129.8
Q ss_pred hcccccceEEEEECCCCCEEE-EEeCCCc--EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-CC
Q 026295 5 VATLDKGTTSSSWNYCGQRLA-TGSTDGT--LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-DG 80 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~-~~~~d~~--i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d~ 80 (240)
+..|.+.+.+++|+|+|++|+ +++.++. |++||+.. .+. ..+..|...+.+++|+|+ |+.|+.++. ++
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-----~~~-~~l~~~~~~~~~~~~spd--g~~l~~~s~~~g 289 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-----GQI-RQVTDGRSNNTEPTWFPD--SQNLAFTSDQAG 289 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-----CCE-EECCCCSSCEEEEEECTT--SSEEEEEECTTS
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-----CCE-EeCcCCCCcccceEECCC--CCEEEEEECCCC
Confidence 556778899999999999888 6666655 88999873 333 456678889999999999 998888775 45
Q ss_pred --eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC---CcEEEEEecCcccccceeEEeeeec
Q 026295 81 --SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD---GHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 81 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
.|.+||+..+ + ...+..+...+..++|+| +|++|++++.+ ..|.+||+.+ .+. ..+..
T Consensus 290 ~~~i~~~d~~~~-------~-~~~l~~~~~~~~~~~~sp--dG~~l~~~~~~~g~~~i~~~d~~~------~~~-~~l~~ 352 (415)
T 2hqs_A 290 RPQVYKVNINGG-------A-PQRITWEGSQNQDADVSS--DGKFMVMVSSNGGQQHIAKQDLAT------GGV-QVLSS 352 (415)
T ss_dssp SCEEEEEETTSS-------C-CEECCCSSSEEEEEEECT--TSSEEEEEEECSSCEEEEEEETTT------CCE-EECCC
T ss_pred CcEEEEEECCCC-------C-EEEEecCCCcccCeEECC--CCCEEEEEECcCCceEEEEEECCC------CCE-EEecC
Confidence 5666676543 2 233444556788999999 99999888764 5899999986 232 22333
Q ss_pred ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC--eEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 156 AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN--SSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 156 ~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~--~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
+. .+. +++|+|++. +|++++.++ + .|++||+.... ...+. +|.+.|++++
T Consensus 353 ~~-~~~----------~~~~spdg~-----~l~~~s~~~----~~~~l~~~d~~g~~-----~~~l~---~~~~~v~~~~ 404 (415)
T 2hqs_A 353 TF-LDE----------TPSLAPNGT-----MVIYSSSQG----MGSVLNLVSTDGRF-----KARLP---ATDGQVKFPA 404 (415)
T ss_dssp SS-SCE----------EEEECTTSS-----EEEEEEEET----TEEEEEEEETTSCC-----EEECC---CSSSEEEEEE
T ss_pred CC-CcC----------CeEEcCCCC-----EEEEEEcCC----CccEEEEEECCCCc-----EEEee---CCCCCCcCCc
Confidence 22 333 899999987 788888772 3 78888875432 23333 4666999999
Q ss_pred EecC
Q 026295 234 WALN 237 (240)
Q Consensus 234 ~sp~ 237 (240)
|+|-
T Consensus 405 ~~~~ 408 (415)
T 2hqs_A 405 WSPY 408 (415)
T ss_dssp ECCC
T ss_pred cccc
Confidence 9994
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=8e-18 Score=131.01 Aligned_cols=200 Identities=11% Similarity=0.043 Sum_probs=132.6
Q ss_pred ccccceEEEEECCCCCEEEEEeCC-CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-CCeEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTD-GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-DGSLLL 84 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d~~v~i 84 (240)
.|...+.+++|+|+|++|++++.+ +.|++|++.... +..+.+..+..+. .+..++|+|+ ++++++++. ++.|.+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-GALTFAAESALPG-SLTHISTDHQ--GQFVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEECSS-CCSEEEECTT--SSEEEEEETTTTEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC-CceeeccccccCC-CCcEEEEcCC--CCEEEEEecCCCeEEE
Confidence 456678899999999999998887 999999997221 1445555665544 7889999999 987766654 889999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCcccccceeEEe--eeecccceee
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILKNWQLQA--EFQNAIDSVT 161 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~~~v~ 161 (240)
||+..+ ........+... ..+..++|+| ++.++++++ .++.|.+||+.+... ..... .+.....
T Consensus 111 ~d~~~~----~~~~~~~~~~~~-~~~~~~~~s~--dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~--- 177 (343)
T 1ri6_A 111 TRLEDG----LPVGVVDVVEGL-DGCHSANISP--DNRTLWVPALKQDRICLFTVSDDGH---LVAQDPAEVTTVEG--- 177 (343)
T ss_dssp EEEETT----EEEEEEEEECCC-TTBCCCEECT--TSSEEEEEEGGGTEEEEEEECTTSC---EEEEEEEEEECSTT---
T ss_pred EECCCC----ccccccccccCC-CCceEEEECC--CCCEEEEecCCCCEEEEEEecCCCc---eeeecccccccCCC---
Confidence 999421 011444444433 4688999999 998888777 889999999975211 11111 1111111
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEe-cCCCCCCCeEEEEEeecCCCCcceeEeeecC-CC--CCCceEEEEEecC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGF-NSDTPQLNSSKVWEFDEAHNRWLPVAELALP-ED--RSDEVYAVAWALN 237 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~-~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~-~~--h~~~v~~v~~sp~ 237 (240)
..+..++|+|++. +|++++ .+ +.|++|++............+... .+ ....+.+++|+||
T Consensus 178 ------~~~~~~~~~pdg~-----~l~~~~~~~-----~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 178 ------AGPRHMVFHPNEQ-----YAYCVNELN-----SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp ------CCEEEEEECTTSS-----EEEEEETTT-----TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred ------CCcceEEECCCCC-----EEEEEeCCC-----CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 1223799999986 565555 55 999999996533333222222211 11 1346778999999
Q ss_pred CC
Q 026295 238 IG 239 (240)
Q Consensus 238 ~~ 239 (240)
+.
T Consensus 242 g~ 243 (343)
T 1ri6_A 242 GR 243 (343)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=4.7e-19 Score=134.89 Aligned_cols=188 Identities=9% Similarity=0.016 Sum_probs=131.2
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec-CccEEEEEEcCCCCCCEEEEEe--cCCe
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH-AGAILKVVWVPPEFGDAVACIC--SDGS 81 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~--~d~~ 81 (240)
+..|...|.+++|+|+|++|++++ ++.|++||+... .+.......+ ...+.+++|+|+ +++|++++ .++.
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD----PSPEKVDTGFATICNNDHGISPD--GALYAISDKVEFGK 109 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC----CSCEECCCTTCCCBCSCCEECTT--SSEEEEEECTTTSS
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC----CCceEeccccccccccceEECCC--CCEEEEEEeCCCCc
Confidence 556888999999999999999987 689999999841 2333334444 367889999999 99999988 4456
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEE-EEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLV-AAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
..||.+.... .....+..+ ..+..++|+| ++.+|+ +++.++.+++|++.... .+ ...+..+...+
T Consensus 110 ~~l~~~~~~~------~~~~~~~~~-~~~~~~~~sp--dg~~l~~~~~~~~~~~l~~~~~~~----~~-~~~~~~~~~~~ 175 (297)
T 2ojh_A 110 SAIYLLPSTG------GTPRLMTKN-LPSYWHGWSP--DGKSFTYCGIRDQVFDIYSMDIDS----GV-ETRLTHGEGRN 175 (297)
T ss_dssp CEEEEEETTC------CCCEECCSS-SSEEEEEECT--TSSEEEEEEEETTEEEEEEEETTT----CC-EEECCCSSSCE
T ss_pred ceEEEEECCC------CceEEeecC-CCccceEECC--CCCEEEEEECCCCceEEEEEECCC----Cc-ceEcccCCCcc
Confidence 7777765332 123333333 3488899999 998776 77889999999975321 11 22333333333
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEec-CCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFN-SDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~-dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. +++|+|++. +|++++. + +.++||++...... ...+. .|...+..++|+||+.
T Consensus 176 ~----------~~~~s~dg~-----~l~~~~~~~-----~~~~i~~~~~~~~~---~~~~~---~~~~~~~~~~~s~dg~ 229 (297)
T 2ojh_A 176 D----------GPDYSPDGR-----WIYFNSSRT-----GQMQIWRVRVDGSS---VERIT---DSAYGDWFPHPSPSGD 229 (297)
T ss_dssp E----------EEEECTTSS-----EEEEEECTT-----SSCEEEEEETTSSC---EEECC---CCSEEEEEEEECTTSS
T ss_pred c----------cceECCCCC-----EEEEEecCC-----CCccEEEECCCCCC---cEEEe---cCCcccCCeEECCCCC
Confidence 3 899999987 6776664 5 99999999743322 22222 3556899999999974
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=4.7e-18 Score=145.72 Aligned_cols=198 Identities=13% Similarity=0.105 Sum_probs=130.4
Q ss_pred ccceEEEEECCCCCEEEEEeC-CC-----cEEEEeCCCCCCCcEEEEeEeeecC------------------------cc
Q 026295 9 DKGTTSSSWNYCGQRLATGST-DG-----TLSIFDSPDPSSSSFTCNLKTKVHA------------------------GA 58 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~~~~h~------------------------~~ 58 (240)
...+.+++|+|||++|++++. |+ .|++||+.. ++....+..+. ..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-----CCEEEEECGGGTC--------------------CCEE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-----CceeEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 346899999999999999998 88 899999983 33333443332 23
Q ss_pred EEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEe
Q 026295 59 ILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYEL 138 (240)
Q Consensus 59 v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~ 138 (240)
+..++|+|+ |++|++++. +.|.+||+..+.. .....+..+...+..++|+| +|++|++++ ++.|.+||+
T Consensus 111 v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SP--DG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSP--KGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp SCCCEECTT--SSEEEEEET-TEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECT--TSSEEEEEE-TTEEEEEET
T ss_pred cceeEECCC--CCEEEEEeC-CcEEEEECCCCCc-----ceEEEcccCCcccccccCCC--CCCEEEEEe-CCcEEEEec
Confidence 789999999 999998876 8999999976410 03334555667899999999 999998887 468999998
Q ss_pred cCcccccceeEEeeeecccceeecc------ccccceeeeEEEeCCCCCCCCceEEEEecCCCC----------------
Q 026295 139 LDPLILKNWQLQAEFQNAIDSVTMF------RKASCISASISWNPQKGENQGSSFVLGFNSDTP---------------- 196 (240)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~---------------- 196 (240)
.+ .+.......+...+... ......+..++|+|++. .|++++.|...
T Consensus 180 ~~------g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-----~l~~~~~d~~~~~~~~~~~~~p~~~~~ 248 (741)
T 2ecf_A 180 AS------GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-----AIAYARIDESPVPVQKRYEVYADRTDV 248 (741)
T ss_dssp TT------TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-----CEEEEEEECTTSCEEEEEEECSSCEEE
T ss_pred CC------CCEEEeccCCccceeccccceeeeeccccccceEECCCCC-----EEEEEEEcCCCCceEecCCCCCCcccc
Confidence 76 23222211111111000 00000123799999998 78888765100
Q ss_pred ------------CCCeEEEEEeec-CCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 197 ------------QLNSSKVWEFDE-AHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 197 ------------~~~~i~iw~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
....|++||+.+ +... .+.....|...+..++| ||+.
T Consensus 249 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~-pDg~ 298 (741)
T 2ecf_A 249 IEQRYPAAGDANVQVKLGVISPAEQAQTQ-----WIDLGKEQDIYLARVNW-RDPQ 298 (741)
T ss_dssp EEEECCBTTSCCCEEEEEEECSSTTCCCE-----EECCCSCSSEEEEEEEE-EETT
T ss_pred eEeecCCCCCCCCeeEEEEEECCCCCceE-----EecCCCCcceEEEEEEe-CCCC
Confidence 000778888766 5422 11111246678999999 9974
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=3.9e-16 Score=122.15 Aligned_cols=203 Identities=7% Similarity=-0.017 Sum_probs=130.0
Q ss_pred ccccceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeee---------cCccEEEEEEcCCCCCCEEEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKV---------HAGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~~~l~s~ 76 (240)
.+...+..++|+|+|++|++++ .++.|++|++...+ ....+..+.. +...+.+++|+|+ |+++++.
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd--g~l~v~~ 158 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG--ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD--NRLAVID 158 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS--CEEEEEEEECCCCCSSTTCSSCCEEEEEECTT--SCEEEEE
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC--CeeecceeecCCCCCCccccCCCceEEEECCC--CcEEEEe
Confidence 3566788999999999988888 67899999996432 3344444432 1224889999999 8866666
Q ss_pred ecCCeEEEEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEE-EeCCCcEEEEEecCcccccceeEEeeee
Q 026295 77 CSDGSLLLWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVA-AYSDGHVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 77 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
..++.|.+|++... ........+.. ....+..++|+| +|+++++ ...++.|.+|++.... ........+.
T Consensus 159 ~~~~~v~~~~~~~~----g~~~~~~~~~~~~g~~p~~~~~sp--dg~~l~v~~~~~~~v~v~~~~~~~--g~~~~~~~~~ 230 (347)
T 3hfq_A 159 LGSDKVYVYNVSDA----GQLSEQSVLTMEAGFGPRHLVFSP--DGQYAFLAGELSSQIASLKYDTQT--GAFTQLGIVK 230 (347)
T ss_dssp TTTTEEEEEEECTT----SCEEEEEEEECCTTCCEEEEEECT--TSSEEEEEETTTTEEEEEEEETTT--TEEEEEEEEE
T ss_pred CCCCEEEEEEECCC----CcEEEeeeEEcCCCCCCceEEECC--CCCEEEEEeCCCCEEEEEEecCCC--CceEEeeeee
Confidence 67889999999721 11122333322 233677899999 9986655 5578899999987411 1122232322
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEE-ecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLG-FNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~-~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
....... ....+..++|+|++. +|+++ ..+ +.|.+|++.... .......+. .+...+..++
T Consensus 231 ~~~~~~~----~~~~~~~i~~spdG~-----~l~v~~~~~-----~~v~v~~~~~~g-~~~~~~~~~---~~~~~~~~~~ 292 (347)
T 3hfq_A 231 TIPADYT----AHNGAAAIRLSHDGH-----FLYVSNRGY-----NTLAVFAVTADG-HLTLIQQIS---TEGDFPRDFD 292 (347)
T ss_dssp SSCTTCC----SCCEEEEEEECTTSC-----EEEEEEETT-----TEEEEEEECGGG-CEEEEEEEE---CSSSCCCEEE
T ss_pred ecCCCCC----CCCcceeEEECCCCC-----EEEEEeCCC-----CEEEEEEECCCC-cEEEeEEEe---cCCCCcCeEE
Confidence 2211000 011234799999997 56444 445 999999997432 223334443 2445789999
Q ss_pred EecCCC
Q 026295 234 WALNIG 239 (240)
Q Consensus 234 ~sp~~~ 239 (240)
|+||+.
T Consensus 293 ~spdg~ 298 (347)
T 3hfq_A 293 LDPTEA 298 (347)
T ss_dssp ECTTSS
T ss_pred ECCCCC
Confidence 999984
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=1.7e-16 Score=124.27 Aligned_cols=199 Identities=9% Similarity=0.029 Sum_probs=130.2
Q ss_pred cccceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe-cCCeEE
Q 026295 8 LDKGTTSSSWNYCGQRLATGST---DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC-SDGSLL 83 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~d~~v~ 83 (240)
+......++|+|+|+ |++++. ++.|++|++... ..+.+..+..+...+..++|+|+ |++|++++ .++.|.
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ---TAHKLNTVVAPGTPPAYVAVDEA--RQLVYSANYHKGTAE 111 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT---EEEEEEEEEEESCCCSEEEEETT--TTEEEEEETTTTEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC---cEEEeeeeecCCCCCEEEEECCC--CCEEEEEeCCCCEEE
Confidence 445677899999999 555544 689999999632 44566666667788999999999 99888877 678999
Q ss_pred EEEeeeccCCCcccEEEEEeeec---------cccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFEST---------STQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
+|++.... ....+..+... ...+..++|+| +|+++++...++.|.+|++.... .......+.
T Consensus 112 v~~~~~~g----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp--dg~l~v~~~~~~~v~~~~~~~~g---~~~~~~~~~ 182 (347)
T 3hfq_A 112 VMKIAADG----ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP--DNRLAVIDLGSDKVYVYNVSDAG---QLSEQSVLT 182 (347)
T ss_dssp EEEECTTS----CEEEEEEEECCCCCSSTTCSSCCEEEEEECT--TSCEEEEETTTTEEEEEEECTTS---CEEEEEEEE
T ss_pred EEEeCCCC----CeeecceeecCCCCCCccccCCCceEEEECC--CCcEEEEeCCCCEEEEEEECCCC---cEEEeeeEE
Confidence 99996321 11333333321 12478899999 88866666678899999998321 112222222
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCC---CCCceEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPED---RSDEVYA 231 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~---h~~~v~~ 231 (240)
.... .....++|+|++. +|++++..+ +.|++|+++...........+..... ....+..
T Consensus 183 ~~~g---------~~p~~~~~spdg~-----~l~v~~~~~----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 183 MEAG---------FGPRHLVFSPDGQ-----YAFLAGELS----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp CCTT---------CCEEEEEECTTSS-----EEEEEETTT----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred cCCC---------CCCceEEECCCCC-----EEEEEeCCC----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 2111 1123799999986 566655443 89999999864333333333332211 1135899
Q ss_pred EEEecCCC
Q 026295 232 VAWALNIG 239 (240)
Q Consensus 232 v~~sp~~~ 239 (240)
++|+||+.
T Consensus 245 i~~spdG~ 252 (347)
T 3hfq_A 245 IRLSHDGH 252 (347)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
Confidence 99999984
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=1e-17 Score=127.48 Aligned_cols=190 Identities=9% Similarity=0.050 Sum_probs=128.6
Q ss_pred cceEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEEEEE
Q 026295 10 KGTTSSSWNYCGQRLATGS--TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLLLWE 86 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd 86 (240)
..+.+++|+|++++|++++ .++.++||.+... ... ...+..+ ..+..++|+|+ ++.++ ++..++.+++|+
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~-~~~~~~~~spd--g~~l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPST---GGT-PRLMTKN-LPSYWHGWSPD--GKSFTYCGIRDQVFDIYS 157 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT---CCC-CEECCSS-SSEEEEEECTT--SSEEEEEEEETTEEEEEE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECC---CCc-eEEeecC-CCccceEECCC--CCEEEEEECCCCceEEEE
Confidence 5788999999999999999 4456666665422 111 2233333 35889999999 88776 777899999999
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
+.... .....+..+...+..++|+| ++.+|++++ .++.+++|++... ......+..+...+.
T Consensus 158 ~~~~~------~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~---- 220 (297)
T 2ojh_A 158 MDIDS------GVETRLTHGEGRNDGPDYSP--DGRWIYFNSSRTGQMQIWRVRVD-----GSSVERITDSAYGDW---- 220 (297)
T ss_dssp EETTT------CCEEECCCSSSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETT-----SSCEEECCCCSEEEE----
T ss_pred EECCC------CcceEcccCCCccccceECC--CCCEEEEEecCCCCccEEEECCC-----CCCcEEEecCCcccC----
Confidence 86432 23345556677899999999 998877666 5899999998632 222334444433343
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCC------CCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTP------QLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~------~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+|++. +|++++.++.. ..+.|++||+.++... ....+. +|...+.+++|+||+.
T Consensus 221 ------~~~~s~dg~-----~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~~~---~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 221 ------FPHPSPSGD-----KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE--TLFDLF---GGQGTMNSPNWSPDGD 284 (297)
T ss_dssp ------EEEECTTSS-----EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE--EEEEEE---ESTTTSCSCCBCTTSS
T ss_pred ------CeEECCCCC-----EEEEEEcCCCCCcccccCceEEEEEecCCCCce--eeeccC---CCCcccccceECCCCC
Confidence 889999987 77777654100 0045999998765422 222222 3566899999999974
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=4.6e-16 Score=121.03 Aligned_cols=196 Identities=10% Similarity=0.119 Sum_probs=128.7
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEe--Eeee-cCccEEEEEEcCCCCCCEEEEEe-cCCeEEE
Q 026295 10 KGTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNL--KTKV-HAGAILKVVWVPPEFGDAVACIC-SDGSLLL 84 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~--~~~~-h~~~v~~~~~~~~~~~~~l~s~~-~d~~v~i 84 (240)
..+.+++|+|+|++|++++ .++.|++|++.... ...... .+.. ....+..++|+|+ +++++.++ .++.|.+
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~pd--g~~l~~~~~~~~~i~~ 204 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDG--HLVAQDPAEVTTVEGAGPRHMVFHPN--EQYAYCVNELNSSVDV 204 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS--CEEEEEEEEEECSTTCCEEEEEECTT--SSEEEEEETTTTEEEE
T ss_pred CCceEEEECCCCCEEEEecCCCCEEEEEEecCCC--ceeeecccccccCCCCCcceEEECCC--CCEEEEEeCCCCEEEE
Confidence 4588899999999888887 88999999997422 223222 2332 2346889999999 88665554 7899999
Q ss_pred EEeeeccCCCcccEEEEEeee---c---cccEEeEEEeecCCCcEEEE-EeCCCcEEEEEecCcccccceeEEeeeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFES---T---STQVLDVQFGVSSTSLKLVA-AYSDGHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
|++....+ .+.....+.. . ...+..++|+| ++.+|++ ...++.|.+|++.... ...+.+..+..+.
T Consensus 205 ~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~i~~s~--dg~~l~v~~~~~~~i~v~d~~~~~--~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 205 WELKDPHG---NIECVQTLDMMPENFSDTRWAADIHITP--DGRHLYACDRTASLITVFSVSEDG--SVLSKEGFQPTET 277 (343)
T ss_dssp EESSCTTS---CCEEEEEEECSCTTCCSCCCEEEEEECT--TSSEEEEEETTTTEEEEEEECTTS--CCEEEEEEEECSS
T ss_pred EEecCCCC---cEEEEeeccccCccccccCCccceEECC--CCCEEEEEecCCCEEEEEEEcCCC--CceEEeeeecCCC
Confidence 99964221 1122333321 1 23566899999 8887764 4478999999997311 1134444443322
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
. +. .++|+|++. +|++++.++ +.|.+|+++.....+.....++. .....+++|.|+
T Consensus 278 ~-~~----------~~~~s~dg~-----~l~~~~~~~----~~v~v~~~d~~~g~~~~~~~~~~----g~~p~~i~~~~~ 333 (343)
T 1ri6_A 278 Q-PR----------GFNVDHSGK-----YLIAAGQKS----HHISVYEIVGEQGLLHEKGRYAV----GQGPMWVVVNAH 333 (343)
T ss_dssp S-CC----------CEEECTTSS-----EEEEECTTT----CEEEEEEEETTTTEEEEEEEEEC----SSSCCEEEEEEE
T ss_pred c-cc----------eEEECCCCC-----EEEEecCCC----CeEEEEEEcCCCceeeEcccccc----CCCCeeEEEEcc
Confidence 2 33 899999987 777777443 99999988755444444455543 235788999997
Q ss_pred CCC
Q 026295 238 IGR 240 (240)
Q Consensus 238 ~~~ 240 (240)
..|
T Consensus 334 ~~~ 336 (343)
T 1ri6_A 334 EGG 336 (343)
T ss_dssp C--
T ss_pred cCC
Confidence 654
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.77 E-value=1.3e-18 Score=148.69 Aligned_cols=200 Identities=12% Similarity=0.107 Sum_probs=128.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc---cEEEEEEcCCCCCCEEEEEecC--------
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG---AILKVVWVPPEFGDAVACICSD-------- 79 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~~~d-------- 79 (240)
.+.+++|+|+|+++++ +.||.|++||+. +++....+..|.. .|.+++|+|+ |++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~-----~g~~~~~~~~~~~~~~~v~~~~~SpD--g~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVE-----TNTSTVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGG-----GCCCEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECC-----CCcEEEEeccccccccccceEEECCC--CCEEEEEecCccceeecc
Confidence 4678999999998876 789999999998 4445555555554 4999999999 9999998764
Q ss_pred -CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 80 -GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 80 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
+.+.+||+..+.. ..+.....+...+..++|+| +|+.|+.++. +.|.+||+.+. +.......+..
T Consensus 90 ~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SP--dG~~la~~~~-~~i~~~~~~~g------~~~~~~~~~~~ 155 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGP--KGQQLIFIFE-NNIYYCAHVGK------QAIRVVSTGKE 155 (723)
T ss_dssp CSEEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCS--STTCEEEEET-TEEEEESSSSS------CCEEEECCCBT
T ss_pred eeeEEEEECCCCce-----EeccCCccccccccccEECC--CCCEEEEEEC-CeEEEEECCCC------ceEEEecCCCC
Confidence 7788999976521 22222223444588999999 9999998886 78999998762 22222222111
Q ss_pred ee-ec-------cccccceeeeEEEeCCCCCCCCceEEEEecCCCC-----------------------------CCCeE
Q 026295 159 SV-TM-------FRKASCISASISWNPQKGENQGSSFVLGFNSDTP-----------------------------QLNSS 201 (240)
Q Consensus 159 ~v-~~-------~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~-----------------------------~~~~i 201 (240)
.+ .. .......+..++|+|++. .|++++.++.. ....|
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-----~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGT-----RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSS-----EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCC-----EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 11 00 000000113799999998 78888755200 00278
Q ss_pred EEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 202 KVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 202 ~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
++||+.++.....+... .....|...+..++||||+
T Consensus 231 ~~~d~~~~~~~~~l~~~-~~~~~~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPP-DDPRMREYYITMVKWATST 266 (723)
T ss_dssp EEEESSSSCCCEECCCC-CCGGGSSEEEEEEEESSSS
T ss_pred EEEECCCCceeEEeeCC-ccCCCccceeEEEEEeCCC
Confidence 88888765532111100 0011235589999999997
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=1.3e-16 Score=124.69 Aligned_cols=177 Identities=8% Similarity=0.081 Sum_probs=131.7
Q ss_pred eEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 12 TTSSSWNYCGQRLATGS--TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
+.+++|+|+|+++++++ .++.|.+||.. +.+.+..+..+...+..+.|+|+ ++++++++.++.|.+||...
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~-----~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGG-----NIKLKTAIQNTGKMSTGLALDSE--GKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETT-----TTEEEEEECCCCTTCCCCEEETT--TTEEEEECTTSEEEEEETTT
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCC-----CCceEEEecCCCCccceEEECCC--CCEEEEEcCCCeEEEEECCC
Confidence 68899999999877776 47889999998 55667777655566889999999 99999999999999999876
Q ss_pred ccCCCcccEEEEEeee----ccccEEeEEEeecCCCcEEEEEeC-CCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 90 EDAQPLQWKLCKSFES----TSTQVLDVQFGVSSTSLKLVAAYS-DGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
+ +....+.. +...+..++|+| ++.++++++. ++.|.+||+.+ .+....+..... .
T Consensus 216 ~-------~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~~--~--- 275 (353)
T 3vgz_A 216 N-------KILSRKKLLDDGKEHFFINISLDT--ARQRAFITDSKAAEVLVVDTRN------GNILAKVAAPES--L--- 275 (353)
T ss_dssp T-------EEEEEEECCCSSSCCCEEEEEEET--TTTEEEEEESSSSEEEEEETTT------CCEEEEEECSSC--C---
T ss_pred C-------eEEEEEEcCCCCCCcccceEEECC--CCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCCC--c---
Confidence 5 66655553 445678899999 8887766664 48999999976 454444433211 2
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+|++. .++++...+ +.|.+||..+.. ....+.. ...+.+++|+||+.
T Consensus 276 -------~~~~s~dg~-----~l~v~~~~~----~~v~~~d~~~~~----~~~~~~~----~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 276 -------AVLFNPARN-----EAYVTHRQA----GKVSVIDAKSYK----VVKTFDT----PTHPNSLALSADGK 326 (353)
T ss_dssp -------CEEEETTTT-----EEEEEETTT----TEEEEEETTTTE----EEEEEEC----CSEEEEEEECTTSC
T ss_pred -------eEEECCCCC-----EEEEEECCC----CeEEEEECCCCe----EEEEEec----CCCCCeEEEcCCCC
Confidence 789999986 565555433 999999987653 2233332 23689999999985
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.76 E-value=1e-16 Score=124.46 Aligned_cols=187 Identities=9% Similarity=0.028 Sum_probs=125.2
Q ss_pred ccceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCCCcEEE-EeEeeecCccEEEEEEcCCCCCCEEEEEecCC---eEE
Q 026295 9 DKGTTSSSWNYCGQRLATGST-DGTLSIFDSPDPSSSSFTC-NLKTKVHAGAILKVVWVPPEFGDAVACICSDG---SLL 83 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~---~v~ 83 (240)
...+ .++|+|+|++|++++. ++.|.+||+... +. ...+..+..+..+++|+|+ +++++++..++ .|.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-----PPKVVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-----SCEEEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-----ceeEEecccCCCCccceEECCC--CCEEEEecCCCCcccEE
Confidence 3455 9999999997766665 889999999733 33 5556666666655999999 99888555442 899
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEE-eCCCc-EEEEEecCcccccceeEEeeeecccceee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAA-YSDGH-VKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~-v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
+||+..+ +.+..+... .....++|+| +|++++++ ..++. |.+|++.......... ...+. ...
T Consensus 112 v~d~~~~-------~~~~~~~~~-~~~~~~~~sp--dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~-~~~--- 176 (331)
T 3u4y_A 112 SYSFLKN-------KFISTIPIP-YDAVGIAISP--NGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFIS-GGT--- 176 (331)
T ss_dssp EEETTTT-------EEEEEEECC-TTEEEEEECT--TSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEEC-SSS---
T ss_pred EEECCCC-------CeEEEEECC-CCccceEECC--CCCEEEEEecCCCceEEEEEECCCCcEeecC-Ccccc-CCC---
Confidence 9999765 666666543 4568999999 88755544 55688 9999997532111111 11111 111
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
....++|+|++. +|+++...+ +.|++||+.+.... .....+. ....+..++|+||+.
T Consensus 177 -------~~~~~~~spdg~-----~l~v~~~~~----~~v~v~d~~~~~~~-~~~~~~~----~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 177 -------RPFNITFTPDGN-----FAFVANLIG----NSIGILETQNPENI-TLLNAVG----TNNLPGTIVVSRDGS 233 (331)
T ss_dssp -------SEEEEEECTTSS-----EEEEEETTT----TEEEEEECSSTTSC-EEEEEEE----CSSCCCCEEECTTSS
T ss_pred -------CccceEECCCCC-----EEEEEeCCC----CeEEEEECCCCccc-ceeeecc----CCCCCceEEECCCCC
Confidence 123899999986 565555433 99999998865531 1133333 224788999999985
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=1.9e-16 Score=123.88 Aligned_cols=185 Identities=6% Similarity=-0.007 Sum_probs=132.8
Q ss_pred cccceEEEEECCCCCEEEEEeC-------CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecC
Q 026295 8 LDKGTTSSSWNYCGQRLATGST-------DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSD 79 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d 79 (240)
+...+..++|+|++++|++++. ++.|.+||.. +.+.+..+.. ...+..+.|+|+ +++++ +...+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-----~~~~~~~~~~-~~~~~~~~~s~d--g~~l~v~~~~~ 110 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV-----TLEVTQAIHN-DLKPFGATINNT--TQTLWFGNTVN 110 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT-----TCCEEEEEEE-SSCCCSEEEETT--TTEEEEEETTT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC-----CCeEEEEEec-CCCcceEEECCC--CCEEEEEecCC
Confidence 4457889999999998888874 4689999998 4556666654 345788999999 88554 45557
Q ss_pred CeEEEEEeeeccCCCcccEEEEEeeeccc---------cEEeEEEeecCCCcEEEEEe--CCCcEEEEEecCccccccee
Q 026295 80 GSLLLWEEIVEDAQPLQWKLCKSFESTST---------QVLDVQFGVSSTSLKLVAAY--SDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~ 148 (240)
+.|.+||..++ +.+..+..+.. .+..++|+| ++.++++++ .++.|.+||+.+ .+
T Consensus 111 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~i~~~d~~~------~~ 175 (353)
T 3vgz_A 111 SAVTAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADD--ATNTVYISGIGKESVIWVVDGGN------IK 175 (353)
T ss_dssp TEEEEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEET--TTTEEEEEEESSSCEEEEEETTT------TE
T ss_pred CEEEEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECC--CCCEEEEEecCCCceEEEEcCCC------Cc
Confidence 89999999765 55555554321 268899999 888777665 478899999987 45
Q ss_pred EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeec-CCCCCC
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELAL-PEDRSD 227 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~-~~~h~~ 227 (240)
....+......+. .++|+|++. +|+++..+ +.|.+||..+....+ .+.. ..++..
T Consensus 176 ~~~~~~~~~~~~~----------~~~~s~dg~-----~l~~~~~~-----~~i~~~d~~~~~~~~----~~~~~~~~~~~ 231 (353)
T 3vgz_A 176 LKTAIQNTGKMST----------GLALDSEGK-----RLYTTNAD-----GELITIDTADNKILS----RKKLLDDGKEH 231 (353)
T ss_dssp EEEEECCCCTTCC----------CCEEETTTT-----EEEEECTT-----SEEEEEETTTTEEEE----EEECCCSSSCC
T ss_pred eEEEecCCCCccc----------eEEECCCCC-----EEEEEcCC-----CeEEEEECCCCeEEE----EEEcCCCCCCc
Confidence 5555542222223 789999987 78888887 999999987654222 2222 223455
Q ss_pred ceEEEEEecCCC
Q 026295 228 EVYAVAWALNIG 239 (240)
Q Consensus 228 ~v~~v~~sp~~~ 239 (240)
.+..++|+||+.
T Consensus 232 ~~~~~~~s~dg~ 243 (353)
T 3vgz_A 232 FFINISLDTARQ 243 (353)
T ss_dssp CEEEEEEETTTT
T ss_pred ccceEEECCCCC
Confidence 788999999985
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.75 E-value=7.1e-16 Score=127.81 Aligned_cols=161 Identities=12% Similarity=0.045 Sum_probs=119.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC----CCCCCEEEEEec-CCeEEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP----PEFGDAVACICS-DGSLLLW 85 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~~l~s~~~-d~~v~iw 85 (240)
.+..++|+|+|++|++++.|+.|++||+... +.+.+..+.. ...+..++|+| + |+++++++. +++|.+|
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~---t~~~~~~i~~-g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAK---EPTKVAEIKI-GIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCEEEEEEEC-CSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCC---CCcEEEEEec-CCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEE
Confidence 3889999999999999999999999999211 5677777774 45689999999 9 999988874 8999999
Q ss_pred EeeeccCCCcccEEEEEeeec-----------cccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecCcccccceeEEeee
Q 026295 86 EEIVEDAQPLQWKLCKSFEST-----------STQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLDPLILKNWQLQAEF 153 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~ 153 (240)
|..+. +++..+..+ ...+..+.++| ++. ++++...+++|.+||+.+.... . ...+
T Consensus 254 D~~t~-------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~--~~~~~~vs~~~~g~i~vvd~~~~~~l---~-~~~i 320 (543)
T 1nir_A 254 DGETL-------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASH--EHPEFIVNVKETGKVLLVNYKDIDNL---T-VTSI 320 (543)
T ss_dssp ETTTC-------CEEEEEECCEECSSSCCEESCCCEEEEEECS--SSSEEEEEETTTTEEEEEECTTSSSC---E-EEEE
T ss_pred ecccc-------ccceeecccCcccCccccccCCceEEEEECC--CCCEEEEEECCCCeEEEEEecCCCcc---e-eEEe
Confidence 98665 666666532 23688899988 654 5667778899999999763211 1 1122
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
. +...+. .+.|+|++. +|++++..+ ++|.+||..+++
T Consensus 321 ~-~~~~~~----------~~~~spdg~-----~l~va~~~~----~~v~v~D~~tg~ 357 (543)
T 1nir_A 321 G-AAPFLH----------DGGWDSSHR-----YFMTAANNS----NKVAVIDSKDRR 357 (543)
T ss_dssp E-CCSSCC----------CEEECTTSC-----EEEEEEGGG----TEEEEEETTTTE
T ss_pred c-cCcCcc----------CceECCCCC-----EEEEEecCC----CeEEEEECCCCe
Confidence 2 222233 799999987 666665433 899999988764
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=5.3e-16 Score=128.53 Aligned_cols=187 Identities=9% Similarity=-0.026 Sum_probs=133.9
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe--eeccCC
Q 026295 16 SWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE--IVEDAQ 93 (240)
Q Consensus 16 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~--~~~~~~ 93 (240)
+|+|++.++++++.|++|.+||.. +++++.++..+.. +..+.|+|+ |+++++++.|+.|.+||+ .+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~-----t~~~~~~i~~g~~-~~~v~~spd--g~~l~v~~~d~~V~v~D~~~~t~--- 212 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGD-----SKKIVKVIDTGYA-VHISRMSAS--GRYLLVIGRDARIDMIDLWAKEP--- 212 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETT-----TCCEEEEEECSTT-EEEEEECTT--SCEEEEEETTSEEEEEETTSSSC---
T ss_pred ccCCCCEEEEEEcCCCeEEEEECC-----CceEEEEEecCcc-cceEEECCC--CCEEEEECCCCeEEEEECcCCCC---
Confidence 488999999999999999999998 6677888874333 889999999 999999999999999999 554
Q ss_pred CcccEEEEEeeeccccEEeEEEee--cCCCcEEEEEe-CCCcEEEEEecCcccccceeEEeeeecccceeeccccc-cce
Q 026295 94 PLQWKLCKSFESTSTQVLDVQFGV--SSTSLKLVAAY-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA-SCI 169 (240)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 169 (240)
+++..+.. ...+..++|+| ..+|+++++++ .+++|.+||..+ .+++..+..+...+.....+ ...
T Consensus 213 ----~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t------~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 213 ----TKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET------LEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp ----EEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT------CCEEEEEECCEECSSSCCEESCCC
T ss_pred ----cEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc------cccceeecccCcccCccccccCCc
Confidence 67777764 45679999975 11677788877 589999999876 56666554322111000000 002
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+..+.++|++.. ++++...+ +.|.+||+.+..... ...+. +...+.+++|+||+.
T Consensus 282 v~~i~~s~~~~~----~~vs~~~~-----g~i~vvd~~~~~~l~--~~~i~----~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 282 VAAIIASHEHPE----FIVNVKET-----GKVLLVNYKDIDNLT--VTSIG----AAPFLHDGGWDSSHR 336 (543)
T ss_dssp EEEEEECSSSSE----EEEEETTT-----TEEEEEECTTSSSCE--EEEEE----CCSSCCCEEECTTSC
T ss_pred eEEEEECCCCCE----EEEEECCC-----CeEEEEEecCCCcce--eEEec----cCcCccCceECCCCC
Confidence 237889998752 55555555 999999998754332 22332 445789999999975
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=2.1e-17 Score=141.27 Aligned_cols=192 Identities=9% Similarity=0.055 Sum_probs=120.9
Q ss_pred ceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 11 GTTSSSWNYCGQRLATGSTD---------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.|.+++|||||++|++++.+ +.+.+||+... ..+.+.....|...+..++|+|+ |+.|+.++. +.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~l~~~~~~~~~~~~~~~SPd--G~~la~~~~-~~ 135 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG---DPQSLDPPEVSNAKLQYAGWGPK--GQQLIFIFE-NN 135 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC---CCEECCCTTCCSCCCSBCCBCSS--TTCEEEEET-TE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC---ceEeccCCccccccccccEECCC--CCEEEEEEC-Ce
Confidence 48999999999999999875 67889999843 22233333345556889999999 999998875 79
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccc------------------cEEeEEEeecCCCcEEEEEeCCC------------
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTST------------------QVLDVQFGVSSTSLKLVAAYSDG------------ 131 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~l~~~~~dg------------ 131 (240)
|++||+..+ +.......+.. .+..++|+| +|++|++++.|+
T Consensus 136 i~~~~~~~g-------~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 136 IYYCAHVGK-------QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP--DGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp EEEESSSSS-------CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT--TSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEECCCC-------ceEEEecCCCCCceECcccceeEEEEeccCcceEEECC--CCCEEEEEEECCCccceEEeeccC
Confidence 999998765 33333332222 237899999 999999887553
Q ss_pred ----------------------cEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEE
Q 026295 132 ----------------------HVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVL 189 (240)
Q Consensus 132 ----------------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~ 189 (240)
.|.+||+.+. +....+..+... ......+..++|+|++. +|++
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~------~~~~~l~~~~~~----~~~~~~~~~~~~SpDg~-----~l~~ 271 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGP------THDLEMMPPDDP----RMREYYITMVKWATSTK-----VAVT 271 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSS------CCCEECCCCCCG----GGSSEEEEEEEESSSSE-----EEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCC------ceeEEeeCCccC----CCccceeEEEEEeCCCe-----EEEE
Confidence 5777776652 221222221000 00011233899999986 6666
Q ss_pred EecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCce----EEEEEecCCC
Q 026295 190 GFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEV----YAVAWALNIG 239 (240)
Q Consensus 190 ~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v----~~v~~sp~~~ 239 (240)
....+ .....|++||+.++.... .+.. .+...+ ..++|+||+.
T Consensus 272 ~~~~~-~~~~~i~~~d~~~g~~~~----~~~~--~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 272 WLNRA-QNVSILTLCDATTGVCTK----KHED--ESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp EEETT-SCEEEEEEEETTTCCEEE----EEEE--ECSSCCCCCCCCCEECTTSC
T ss_pred EEcCC-CCeEEEEEEeCCCCcceE----EEEe--ccCCEEeccCCCceEcCCCC
Confidence 54320 111578999987654221 1111 122344 3789999985
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=5.9e-17 Score=143.90 Aligned_cols=183 Identities=14% Similarity=0.096 Sum_probs=136.4
Q ss_pred cccceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc-cEEEEEEcCCCCCCEEEEEecCCeEE-E
Q 026295 8 LDKGTTSSSWN-YCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG-AILKVVWVPPEFGDAVACICSDGSLL-L 84 (240)
Q Consensus 8 h~~~v~~~~~s-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~d~~v~-i 84 (240)
|...+.+++|+ |+|++|++++ ++.|.+|+.... .. ..+..|.. .+..+.|+ + |+.++.++.+..+. +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~-----~~-~~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT-----YV-LKVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS-----BE-EECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC-----ce-EEccCCCcceEEeeeEc-C--CCeEEEEECCCceEEE
Confidence 45579999999 9999999988 689999998732 22 23456666 89999999 8 99999988877777 8
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
|++..+ .. ..+..+...+..++|+| +|++|++++.++.|++||+.+ ++....+..+...+.
T Consensus 364 ~d~~~~-------~~-~~l~~~~~~~~~~~~Sp--DG~~la~~~~~~~v~~~d~~t------g~~~~~~~~~~~~v~--- 424 (1045)
T 1k32_A 364 YDYRTG-------KA-EKFEENLGNVFAMGVDR--NGKFAVVANDRFEIMTVDLET------GKPTVIERSREAMIT--- 424 (1045)
T ss_dssp EETTTC-------CE-EECCCCCCSEEEEEECT--TSSEEEEEETTSEEEEEETTT------CCEEEEEECSSSCCC---
T ss_pred EECCCC-------Cc-eEecCCccceeeeEECC--CCCEEEEECCCCeEEEEECCC------CceEEeccCCCCCcc---
Confidence 887653 22 33336667899999999 999999999999999999986 444444445555555
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCC-----CCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSD-----TPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd-----~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++|+|++. +|++++.++ ....+.|++||+.++. ...+. .|...+..++|+||+.
T Consensus 425 -------~~~~SpDG~-----~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-----~~~l~---~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 425 -------DFTISDNSR-----FIAYGFPLKHGETDGYVMQAIHVYDMEGRK-----IFAAT---TENSHDYAPAFDADSK 484 (1045)
T ss_dssp -------CEEECTTSC-----EEEEEEEECSSTTCSCCEEEEEEEETTTTE-----EEECS---CSSSBEEEEEECTTSC
T ss_pred -------ceEECCCCC-----eEEEEecCccccccCCCCCeEEEEECCCCc-----EEEee---CCCcccCCceEcCCCC
Confidence 899999997 788877640 0000489999987643 22222 4666899999999985
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=9.6e-15 Score=114.87 Aligned_cols=190 Identities=9% Similarity=0.066 Sum_probs=121.7
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCC----CcEEE----EeEeeecCccEEEEEEcCCCCCCEEEEEe-cCC
Q 026295 11 GTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSS----SSFTC----NLKTKVHAGAILKVVWVPPEFGDAVACIC-SDG 80 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~----~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~d~ 80 (240)
.+.+++|+|+|++|++++ .++.|++|++..... ..... ......+...+..++|+|+ |+++++++ .++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~v~~~~~~ 233 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD--GKFAYLINEIGG 233 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTC
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC--CCEEEEEcCCCC
Confidence 457899999999766655 478999999874321 00111 1111233456789999999 99877776 689
Q ss_pred eEEEEEeeeccCCCcccEEEEEee---eccccEEeEEEeecCCCcEEEEEeCC--CcEEEEEecCcccccceeEEeeeec
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSSTSLKLVAAYSD--GHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~d--g~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
.|.+|++..+ .+..+..+. .+......++|+| +|++|+++..+ +.|.+|++.... .....+..+..
T Consensus 234 ~v~v~~~~~g-----~~~~~~~~~~~~~~~~~~~~i~~sp--dg~~l~v~~~~~~~~i~v~~~~~~~--g~~~~~~~~~~ 304 (361)
T 3scy_A 234 TVIAFRYADG-----MLDEIQTVAADTVNAQGSGDIHLSP--DGKYLYASNRLKADGVAIFKVDETN--GTLTKVGYQLT 304 (361)
T ss_dssp EEEEEEEETT-----EEEEEEEEESCSSCCCCEEEEEECT--TSSEEEEEECSSSCEEEEEEECTTT--CCEEEEEEEEC
T ss_pred eEEEEEecCC-----ceEEeEEEecCCCCCCCcccEEECC--CCCEEEEECCCCCCEEEEEEEcCCC--CcEEEeeEecC
Confidence 9999999743 112333332 2234567999999 99988776654 899999996210 11233333332
Q ss_pred ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe
Q 026295 156 AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA 235 (240)
Q Consensus 156 ~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 235 (240)
...+. .++|+|++. +|++++.++ +.|.+|+++......... ....+...+.||.|.
T Consensus 305 -g~~~~----------~~~~spdg~-----~l~~~~~~~----~~v~v~~~d~~~g~~~~~----~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 305 -GIHPR----------NFIITPNGK-----YLLVACRDT----NVIQIFERDQATGLLTDI----KKDIKVDKPVCLKFV 360 (361)
T ss_dssp -SSCCC----------EEEECTTSC-----EEEEEETTT----TEEEEEEECTTTCCEEEC----SCCEECSSEEEEEEE
T ss_pred -CCCCc----------eEEECCCCC-----EEEEEECCC----CCEEEEEEECCCCcEeec----ceeeeCCCCeEEEEc
Confidence 22223 899999997 788887544 999999887543332221 111233478999997
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=3.3e-16 Score=134.27 Aligned_cols=188 Identities=12% Similarity=-0.002 Sum_probs=129.3
Q ss_pred hhcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCcc----------------EEEEEEcCC
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGA----------------ILKVVWVPP 67 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~----------------v~~~~~~~~ 67 (240)
.+..|...+..++|||+|++|+.++. +.|++||+.. .+.......+... +..+.|+|+
T Consensus 146 ~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~-----g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD 219 (741)
T 2ecf_A 146 QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS-----GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD 219 (741)
T ss_dssp BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTT-----TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT
T ss_pred EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCC-----CCEEEeccCCccceeccccceeeeeccccccceEECCC
Confidence 35567788999999999999999885 6999999973 3443333333322 478999999
Q ss_pred CCCCEEEEEecCC---------------------------------eEEEEEeee-ccCCCcccEEEEEee--eccccEE
Q 026295 68 EFGDAVACICSDG---------------------------------SLLLWEEIV-EDAQPLQWKLCKSFE--STSTQVL 111 (240)
Q Consensus 68 ~~~~~l~s~~~d~---------------------------------~v~iwd~~~-~~~~~~~~~~~~~~~--~~~~~v~ 111 (240)
|++|++++.|+ .|.+||+.. + +...... .+...+.
T Consensus 220 --g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~-------~~~~~~~~~~~~~~~~ 290 (741)
T 2ecf_A 220 --DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA-------QTQWIDLGKEQDIYLA 290 (741)
T ss_dssp --SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC-------CCEEECCCSCSSEEEE
T ss_pred --CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC-------ceEEecCCCCcceEEE
Confidence 99999887765 778888865 4 3222221 3667889
Q ss_pred eEEEeecCCCcEEEEEeC-----CCcEEEEEecCcccccceeEEeeeecccc-eeeccccccceeeeEEEeCCCCCCCCc
Q 026295 112 DVQFGVSSTSLKLVAAYS-----DGHVKVYELLDPLILKNWQLQAEFQNAID-SVTMFRKASCISASISWNPQKGENQGS 185 (240)
Q Consensus 112 ~~~~~~~~~~~~l~~~~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~v~~~p~~~~~~~~ 185 (240)
.++| | +|++|++++. +..|.+||+.+ ++....+..+.. .+. .+..++|+|++.
T Consensus 291 ~~~~-p--Dg~~l~~~~~~~~~~~~~i~~~d~~~------g~~~~~~~~~~~~~~~-------~~~~~~~spdg~----- 349 (741)
T 2ecf_A 291 RVNW-R--DPQHLSFQRQSRDQKKLDLVEVTLAS------NQQRVLAHETSPTWVP-------LHNSLRFLDDGS----- 349 (741)
T ss_dssp EEEE-E--ETTEEEEEEEETTSSEEEEEEEETTT------CCEEEEEEEECSSCCC-------CCSCCEECTTSC-----
T ss_pred EEEe-C--CCCEEEEEEecccCCeEEEEEEECCC------CceEEEEEcCCCCcCC-------cCCceEECCCCe-----
Confidence 9999 9 9998887664 56799999886 343333333221 110 112789999986
Q ss_pred eEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEE-EEecCCC
Q 026295 186 SFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAV-AWALNIG 239 (240)
Q Consensus 186 ~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~sp~~~ 239 (240)
+++++..+ +.++||.++.... ...+. .|...|..+ +|+||+.
T Consensus 350 ~~~~~~~~-----g~~~l~~~~~~~~----~~~l~---~~~~~v~~~~~~s~dg~ 392 (741)
T 2ecf_A 350 ILWSSERT-----GFQHLYRIDSKGK----AAALT---HGNWSVDELLAVDEKAG 392 (741)
T ss_dssp EEEEECTT-----SSCEEEEECSSSC----EEESC---CSSSCEEEEEEEETTTT
T ss_pred EEEEecCC-----CccEEEEEcCCCC----eeeee---ecceEEEeEeEEeCCCC
Confidence 78888777 9899998874322 22232 355578887 5999985
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=2.3e-15 Score=116.81 Aligned_cols=178 Identities=9% Similarity=0.115 Sum_probs=119.0
Q ss_pred EEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-CCeEEEEEeeeccC
Q 026295 15 SSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-DGSLLLWEEIVEDA 92 (240)
Q Consensus 15 ~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~ 92 (240)
..|.++++ .+++++.++.|++||.. +.+.+..+..+...+ .++|+|+ ++++++++. ++.|.+||...+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~-----~~~~~~~~~~~~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~-- 72 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTD-----TLEILNQITLGYDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLE-- 72 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETT-----TCCEEEEEECCCCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSS--
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCc-----ccceeeeEEccCCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCC--
Confidence 34566555 47778888999999998 445556665555666 9999999 886666555 889999999765
Q ss_pred CCcccEE-EEEeeeccccEEeEEEeecCCCcEEEEEeCCC---cEEEEEecCcccccceeEEeeeecccceeeccccccc
Q 026295 93 QPLQWKL-CKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG---HVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASC 168 (240)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (240)
+. ...+..+.....+++|+| ++.++++...++ .|.+||+.+ .+....+..... .
T Consensus 73 -----~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~i~v~d~~~------~~~~~~~~~~~~-~-------- 130 (331)
T 3u4y_A 73 -----PPKVVAIQEGQSSMADVDITP--DDQFAVTVTGLNHPFNMQSYSFLK------NKFISTIPIPYD-A-------- 130 (331)
T ss_dssp -----SCEEEEEEECSSCCCCEEECT--TSSEEEECCCSSSSCEEEEEETTT------TEEEEEEECCTT-E--------
T ss_pred -----ceeEEecccCCCCccceEECC--CCCEEEEecCCCCcccEEEEECCC------CCeEEEEECCCC-c--------
Confidence 33 555555555555599999 999888555553 899999986 454544433222 1
Q ss_pred eeeeEEEeCCCCCCCCceEEEEecCCCCCCCe-EEEEEeecCCCCcce-eEeeecCCCCCCceEEEEEecCCC
Q 026295 169 ISASISWNPQKGENQGSSFVLGFNSDTPQLNS-SKVWEFDEAHNRWLP-VAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 169 ~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~-i~iw~~~~~~~~~~~-~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
..++|+|++.. ++++...+ +. |.+|++......... ...+ .....+..++|+||+.
T Consensus 131 --~~~~~spdg~~----l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 131 --VGIAISPNGNG----LILIDRSS-----ANTVRRFKIDADGVLFDTGQEFI----SGGTRPFNITFTPDGN 188 (331)
T ss_dssp --EEEEECTTSSC----EEEEEETT-----TTEEEEEEECTTCCEEEEEEEEE----CSSSSEEEEEECTTSS
T ss_pred --cceEECCCCCE----EEEEecCC-----CceEEEEEECCCCcEeecCCccc----cCCCCccceEECCCCC
Confidence 28999999862 44444554 77 999999854322211 1112 1334689999999974
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.71 E-value=1.6e-16 Score=135.53 Aligned_cols=194 Identities=12% Similarity=0.083 Sum_probs=128.1
Q ss_pred hcccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCcc--------------EEEEEEcCCCCC
Q 026295 5 VATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGA--------------ILKVVWVPPEFG 70 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~--------------v~~~~~~~~~~~ 70 (240)
+..+...+.+++|+|+|++|+.+ .++.|++|++...+....+.......+... +.++.|+|+ |
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--g 192 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--G 192 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--S
T ss_pred ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC--C
Confidence 34456678889999999999995 679999999974000002222222222222 478999999 9
Q ss_pred CEEEEEe---------------------------------cCCeEEEEEeeeccCCCcccEEEEEe--eeccccEEeEEE
Q 026295 71 DAVACIC---------------------------------SDGSLLLWEEIVEDAQPLQWKLCKSF--ESTSTQVLDVQF 115 (240)
Q Consensus 71 ~~l~s~~---------------------------------~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~ 115 (240)
++|++++ .+..|.+||+..+ +..... ..+...+..++|
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-------KTVYLQTGEPKEKFLTNLSW 265 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-------EEEECCCCSCTTCEEEEEEE
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-------ceEeeccCCCCceeEeeEEE
Confidence 9999887 3467999998765 433322 245567899999
Q ss_pred eecCCCcEEEEEeCCC-----cEEEEEecCcccccceeEEeeee-cc-cceeeccccccceeeeEEEeC--CCCCCCCce
Q 026295 116 GVSSTSLKLVAAYSDG-----HVKVYELLDPLILKNWQLQAEFQ-NA-IDSVTMFRKASCISASISWNP--QKGENQGSS 186 (240)
Q Consensus 116 ~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~~v~~~p--~~~~~~~~~ 186 (240)
+| +|++|++++.++ .|.+||+.+ ++....+. .. ...+ ..+..+.|+| ++. +
T Consensus 266 sp--dg~~l~~~~~~~~~~~~~v~~~d~~~------g~~~~~~~~~~~~~~~-------~~~~~~~~sp~~dg~-----~ 325 (706)
T 2z3z_A 266 SP--DENILYVAEVNRAQNECKVNAYDAET------GRFVRTLFVETDKHYV-------EPLHPLTFLPGSNNQ-----F 325 (706)
T ss_dssp CT--TSSEEEEEEECTTSCEEEEEEEETTT------CCEEEEEEEEECSSCC-------CCCSCCEECTTCSSE-----E
T ss_pred EC--CCCEEEEEEeCCCCCeeEEEEEECCC------CceeeEEEEccCCCeE-------CccCCceeecCCCCE-----E
Confidence 99 999998887775 899999876 21111221 11 1111 0112789999 876 7
Q ss_pred EEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEE-EEEecCCC
Q 026295 187 FVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYA-VAWALNIG 239 (240)
Q Consensus 187 l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~sp~~~ 239 (240)
|+++..+ +.++||.++.... ....+. .|...+.. ++|+||+.
T Consensus 326 l~~~~~~-----g~~~l~~~~~~~~---~~~~l~---~~~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 326 IWQSRRD-----GWNHLYLYDTTGR---LIRQVT---KGEWEVTNFAGFDPKGT 368 (706)
T ss_dssp EEEECTT-----SSCEEEEEETTSC---EEEECC---CSSSCEEEEEEECTTSS
T ss_pred EEEEccC-----CccEEEEEECCCC---EEEecC---CCCeEEEeeeEEcCCCC
Confidence 8888777 9999999873221 222332 35557877 89999974
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=1e-15 Score=130.64 Aligned_cols=184 Identities=10% Similarity=0.122 Sum_probs=121.7
Q ss_pred eEEEEECCCCCEEEEEe---------------------------------CCCcEEEEeCCCCCCCcEEEEeEe--eecC
Q 026295 12 TTSSSWNYCGQRLATGS---------------------------------TDGTLSIFDSPDPSSSSFTCNLKT--KVHA 56 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~---------------------------------~d~~i~iw~~~~~~~~~~~~~~~~--~~h~ 56 (240)
+.+++|+|||++|++++ .+..|++||+.. .+..... ..|.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~-----~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT-----GKTVYLQTGEPKE 257 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT-----TEEEECCCCSCTT
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC-----CceEeeccCCCCc
Confidence 58899999999999997 446799999973 3332222 2466
Q ss_pred ccEEEEEEcCCCCCCEEEEEecCC-----eEEEEEeeeccCCCcccEEEEEee--eccc---cEEeEEEeecCCCcEEEE
Q 026295 57 GAILKVVWVPPEFGDAVACICSDG-----SLLLWEEIVEDAQPLQWKLCKSFE--STST---QVLDVQFGVSSTSLKLVA 126 (240)
Q Consensus 57 ~~v~~~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~--~~~~---~v~~~~~~~~~~~~~l~~ 126 (240)
..+..++|+|+ |+.|++++.++ .|.+||+.++ +....+. .... .+..+.|+|..+|.++++
T Consensus 258 ~~~~~~~~spd--g~~l~~~~~~~~~~~~~v~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 258 KFLTNLSWSPD--ENILYVAEVNRAQNECKVNAYDAETG-------RFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp CEEEEEEECTT--SSEEEEEEECTTSCEEEEEEEETTTC-------CEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred eeEeeEEEECC--CCEEEEEEeCCCCCeeEEEEEECCCC-------ceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence 78999999999 99998887775 8999998654 2222222 1111 246789976336778899
Q ss_pred EeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC--eEEEE
Q 026295 127 AYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN--SSKVW 204 (240)
Q Consensus 127 ~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~--~i~iw 204 (240)
++.|+.+++|.+... ......+..+...+. ..+.|+|++. .|+.++.++ + .+.||
T Consensus 329 ~~~~g~~~l~~~~~~-----~~~~~~l~~~~~~v~---------~~~~~spdg~-----~l~~~~~~~----~~~~~~l~ 385 (706)
T 2z3z_A 329 SRRDGWNHLYLYDTT-----GRLIRQVTKGEWEVT---------NFAGFDPKGT-----RLYFESTEA----SPLERHFY 385 (706)
T ss_dssp ECTTSSCEEEEEETT-----SCEEEECCCSSSCEE---------EEEEECTTSS-----EEEEEESSS----CTTCBEEE
T ss_pred EccCCccEEEEEECC-----CCEEEecCCCCeEEE---------eeeEEcCCCC-----EEEEEecCC----CCceEEEE
Confidence 999999999988621 233444444433333 1378999987 566665553 4 35555
Q ss_pred EeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 205 EFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.++..... ...+. |...+.+++|+||+.
T Consensus 386 ~~d~~~~~---~~~l~----~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 386 CIDIKGGK---TKDLT----PESGMHRTQLSPDGS 413 (706)
T ss_dssp EEETTCCC---CEESC----CSSSEEEEEECTTSS
T ss_pred EEEcCCCC---ceecc----CCCceEEEEECCCCC
Confidence 55432222 12222 455799999999974
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=3.8e-14 Score=111.42 Aligned_cols=204 Identities=10% Similarity=0.015 Sum_probs=127.0
Q ss_pred cccceEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe-cCCeE
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTD----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC-SDGSL 82 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~d~~v 82 (240)
+......++|+|+|++|++++.+ +.|.+|++.... +..+.+.....+......+++ + ++++++++ .++.|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~-g~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK-GTLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT-TEEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC-CcEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEE
Confidence 44567789999999999999886 799999986431 134555555555566778888 5 77666665 57899
Q ss_pred EEEEeeeccCCCcccEEEEEeee--------ccccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCccccc--c-eeEE
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFES--------TSTQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILK--N-WQLQ 150 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~--~-~~~~ 150 (240)
.+|++...... ..........+ +...+.+++|+| +|+++++++ .++.|.+|++....... + ....
T Consensus 123 ~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 123 TVFPIGQDGAL-LPASDVIEFKGSGPDKERQTMPHLHCVRITP--DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp EEEEBCTTSCB-CSCSEEEECCCCCSCTTTCSSCCEEEEEECT--TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred EEEEeCCCCcC-cccceeEEccCCCCCccccCCCcceEEEECC--CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 99998643110 00011111111 123457899999 998666555 57899999987532100 0 0000
Q ss_pred ---eeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCC
Q 026295 151 ---AEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSD 227 (240)
Q Consensus 151 ---~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 227 (240)
..+.... ......++|+|++. +|+++...+ +.|.+|++.++. ......+.....+..
T Consensus 200 ~~~~~~~~~~---------~~~~~~~~~spdg~-----~l~v~~~~~----~~v~v~~~~~g~--~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 200 GTPEAFKVAP---------GSGPRHLIFNSDGK-----FAYLINEIG----GTVIAFRYADGM--LDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEEEEECCT---------TCCEEEEEECTTSS-----EEEEEETTT----CEEEEEEEETTE--EEEEEEEESCSSCCC
T ss_pred ccccceecCC---------CCCCeEEEEcCCCC-----EEEEEcCCC----CeEEEEEecCCc--eEEeEEEecCCCCCC
Confidence 1111110 11123899999987 677777433 999999998543 223333343334555
Q ss_pred ceEEEEEecCCC
Q 026295 228 EVYAVAWALNIG 239 (240)
Q Consensus 228 ~v~~v~~sp~~~ 239 (240)
...+++|+||+.
T Consensus 260 ~~~~i~~spdg~ 271 (361)
T 3scy_A 260 GSGDIHLSPDGK 271 (361)
T ss_dssp CEEEEEECTTSS
T ss_pred CcccEEECCCCC
Confidence 678999999984
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.68 E-value=8e-17 Score=137.76 Aligned_cols=194 Identities=8% Similarity=0.038 Sum_probs=122.6
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCc---cEEEEEEcCCCCCCEEEEEec---------CC
Q 026295 13 TSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAG---AILKVVWVPPEFGDAVACICS---------DG 80 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~~~---------d~ 80 (240)
..++|+|+|+++++ +.|+.|++||+. +++....+..|.. .+.+++|+|+ |++|++++. ++
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~SpD--g~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIE-----TGQSYTILSNRTMKSVNASNYGLSPD--RQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESS-----SCCEEEEECHHHHHTTTCSEEEECTT--SSEEEEEEEEEECSSSCEEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcC-----CCcEEEEEccccccccceeeEEECCC--CCeEEEEecCceeEEeecce
Confidence 37899999965555 468999999998 4445555554433 3899999999 999998876 68
Q ss_pred eEEEEEeeeccCCCcccEEE--EEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-eccc
Q 026295 81 SLLLWEEIVEDAQPLQWKLC--KSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAI 157 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~ 157 (240)
.|++||+..+ +.+ ..+ ...+..++|+| +|+.|+.+. ++.|++|++.+. +..... ..+.
T Consensus 91 ~i~~~d~~~g-------~~~~~~~l---~~~~~~~~~SP--DG~~la~~~-~~~i~~~~~~~g------~~~~l~~~~~~ 151 (719)
T 1z68_A 91 TYYIYDLSNG-------EFVRGNEL---PRPIQYLCWSP--VGSKLAYVY-QNNIYLKQRPGD------PPFQITFNGRE 151 (719)
T ss_dssp EEEEEETTTT-------EECCSSCC---CSSBCCEEECS--STTCEEEEE-TTEEEEESSTTS------CCEECCCCCBT
T ss_pred EEEEEECCCC-------ccccceec---CcccccceECC--CCCEEEEEE-CCeEEEEeCCCC------CcEEEecCCCc
Confidence 9999999765 331 122 24688899999 999898886 789999998763 221111 1111
Q ss_pred ceee-cc------ccccceeeeEEEeCCCCCCCCceEEEEecCCCC-----------------------------CCCeE
Q 026295 158 DSVT-MF------RKASCISASISWNPQKGENQGSSFVLGFNSDTP-----------------------------QLNSS 201 (240)
Q Consensus 158 ~~v~-~~------~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~-----------------------------~~~~i 201 (240)
..+. .. .........++|+|++. .|++++.|+.. ....|
T Consensus 152 ~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-----~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 152 NKIFNGIPDWVYEEEMLATKYALWWSPNGK-----FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp TTEEESSCCHHHHHHTTCSSCCEEECTTSS-----EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred CCeEcccccceeeeecccCcccEEECCCCC-----EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 1000 00 00000112799999998 88888765210 00177
Q ss_pred EEEEeecCCCC-cceeEeeecCCCCCCceEEEEEecCC
Q 026295 202 KVWEFDEAHNR-WLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 202 ~iw~~~~~~~~-~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
++||+.++... +..........+|...+..++||||+
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~ 264 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE 264 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC
Confidence 88888765321 00000000112466689999999994
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=3e-15 Score=116.13 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=84.4
Q ss_pred ceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCCCcEEEEeEeee-c----CccEEEEEEcCCCCCCEEEEEe-------
Q 026295 11 GTTSSSWNYCGQRL-ATGSTDGTLSIFDSPDPSSSSFTCNLKTKV-H----AGAILKVVWVPPEFGDAVACIC------- 77 (240)
Q Consensus 11 ~v~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~~l~s~~------- 77 (240)
.+..++|+|+|+++ +++..++.|.+||+. +.+.+..+.. + ...+..++|+|+ |++++++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLV-----TGETLGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLEL 107 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETT-----TCCEEEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECC-----CCCeEeeEEcCCcccccccccceEECCC--CCEEEEEeccccccc
Confidence 47889999999865 455567899999997 4444544442 1 225778999999 98888875
Q ss_pred -----cCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 78 -----SDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 78 -----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
.++.|.+||+..+ +.+..+.. ...+..++|+| ++.+|+++ ++.|.+||+.+
T Consensus 108 ~~~~~~~~~i~v~d~~~~-------~~~~~~~~-~~~~~~~~~s~--dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 108 THFEVQPTRVALYDAETL-------SRRKAFEA-PRQITMLAWAR--DGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp SCEEECCCEEEEEETTTT-------EEEEEEEC-CSSCCCEEECT--TSSCEEEE--SSSEEEEETTT
T ss_pred ccccccCceEEEEECCCC-------cEEEEEeC-CCCcceeEECC--CCCEEEEe--CCeEEEEECCC
Confidence 5799999999765 56655554 35678899999 99877777 68899999876
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.66 E-value=4e-14 Score=111.69 Aligned_cols=192 Identities=13% Similarity=0.042 Sum_probs=121.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCE--EEEEe-----------
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDA--VACIC----------- 77 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~--l~s~~----------- 77 (240)
.+..++|+|+|++|++++.+ .|.+|++...+ ....+.....+ +.+..++|+|+ |++ ++++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g--~~~~~~~~~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPT--EIVHEASHPIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETT--EEEEEEEEECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEE
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCC--CEEEeeEeecC-CCCccEEECCC--CCEEEEEEecCCcceecccee
Confidence 57789999999999999988 99999985211 22222222211 23556899999 884 44543
Q ss_pred --cCCeEEEEEeeeccCCCcccEEEEEee----eccccEEeEEEeecCCCcEEEEEeC-CCcEEEEEec-CcccccceeE
Q 026295 78 --SDGSLLLWEEIVEDAQPLQWKLCKSFE----STSTQVLDVQFGVSSTSLKLVAAYS-DGHVKVYELL-DPLILKNWQL 149 (240)
Q Consensus 78 --~d~~v~iwd~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~-dg~v~iw~~~-~~~~~~~~~~ 149 (240)
.++.+.+|++.... +....+. .+...+..++|+| +|++++++.. ++.|.+|++. +. +...
T Consensus 115 ~~~~g~v~v~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~sp--dG~~l~~~~~~~~~v~~~~~~~~g----~~~~ 182 (365)
T 1jof_A 115 YKFAGYGNVFSVSETG------KLEKNVQNYEYQENTGIHGMVFDP--TETYLYSADLTANKLWTHRKLASG----EVEL 182 (365)
T ss_dssp SSSCCEEEEEEECTTC------CEEEEEEEEECCTTCCEEEEEECT--TSSEEEEEETTTTEEEEEEECTTS----CEEE
T ss_pred ecCCceEEEEccCCCC------cCcceEeeEEeCCCCcceEEEECC--CCCEEEEEcCCCCEEEEEEECCCC----CEEE
Confidence 68999999996321 2222222 2446789999999 9998877664 6799999997 31 1222
Q ss_pred Eeeeec--ccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce-eEeeecC----
Q 026295 150 QAEFQN--AIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP-VAELALP---- 222 (240)
Q Consensus 150 ~~~~~~--~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~-~~~~~~~---- 222 (240)
...+.. +...+ ..++|+|++. +|+++...+ +.|.+|+++........ ...+...
T Consensus 183 ~~~~~~~~~g~~p----------~~~~~spdg~-----~l~v~~~~~----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 183 VGSVDAPDPGDHP----------RWVAMHPTGN-----YLYALMEAG----NRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp EEEEECSSTTCCE----------EEEEECTTSS-----EEEEEETTT----TEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred eeeEecCCCCCCC----------CEeEECCCCC-----EEEEEECCC----CeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 222221 11222 3899999997 777777643 89999998743222211 1112211
Q ss_pred CCCCC------ceEEEE-EecCCC
Q 026295 223 EDRSD------EVYAVA-WALNIG 239 (240)
Q Consensus 223 ~~h~~------~v~~v~-~sp~~~ 239 (240)
.+|.. .+..++ |+||+.
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCcccccccccccccEEEECCCCC
Confidence 12333 588999 999974
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.66 E-value=2e-15 Score=134.09 Aligned_cols=157 Identities=9% Similarity=0.028 Sum_probs=121.7
Q ss_pred hccccc-ceEEEEECCCCCEEEEEeCCCcEE-EEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeE
Q 026295 5 VATLDK-GTTSSSWNYCGQRLATGSTDGTLS-IFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 5 ~~~h~~-~v~~~~~s~~~~~l~~~~~d~~i~-iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 82 (240)
+..|.+ .+..++|+ +|+.|+.++.+..+. +|++... +.. .+..|...+..++|+|+ |++|++++.++.|
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~-----~~~-~l~~~~~~~~~~~~SpD--G~~la~~~~~~~v 402 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG-----KAE-KFEENLGNVFAMGVDRN--GKFAVVANDRFEI 402 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-----CEE-ECCCCCCSEEEEEECTT--SSEEEEEETTSEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-----Cce-EecCCccceeeeEECCC--CCEEEEECCCCeE
Confidence 445666 88999999 999999999888888 8898732 222 33377788999999999 9999999999999
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC----------cEEEEEecCcccccceeEEee
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG----------HVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----------~v~iw~~~~~~~~~~~~~~~~ 152 (240)
++||+.++ +.......+...+..++|+| +|++|++++.++ .|++||+.+ .+ ...
T Consensus 403 ~~~d~~tg-------~~~~~~~~~~~~v~~~~~Sp--DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~------g~-~~~ 466 (1045)
T 1k32_A 403 MTVDLETG-------KPTVIERSREAMITDFTISD--NSRFIAYGFPLKHGETDGYVMQAIHVYDMEG------RK-IFA 466 (1045)
T ss_dssp EEEETTTC-------CEEEEEECSSSCCCCEEECT--TSCEEEEEEEECSSTTCSCCEEEEEEEETTT------TE-EEE
T ss_pred EEEECCCC-------ceEEeccCCCCCccceEECC--CCCeEEEEecCccccccCCCCCeEEEEECCC------Cc-EEE
Confidence 99999765 55556667778889999999 999998887654 899999976 33 334
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEe
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEF 206 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~ 206 (240)
+..+...+. .+.|+|++. +|++++.+ +...+|+.
T Consensus 467 l~~~~~~~~----------~~~~spdG~-----~l~~~s~~-----~~~~~~~~ 500 (1045)
T 1k32_A 467 ATTENSHDY----------APAFDADSK-----NLYYLSYR-----SLDPSPDR 500 (1045)
T ss_dssp CSCSSSBEE----------EEEECTTSC-----EEEEEESC-----CCCCEECS
T ss_pred eeCCCcccC----------CceEcCCCC-----EEEEEecc-----cCCcCcch
Confidence 444433333 789999997 78888876 66666653
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=5.9e-16 Score=132.41 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=73.5
Q ss_pred eEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCCCcEEEE--eEeeecCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 12 TTSSSWNYCGQRLATGST---------DGTLSIFDSPDPSSSSFTCN--LKTKVHAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
+.+++|||||++|+.++. ++.|++||+. +.+.+ ..+ ...+..++|+|+ |+.|+.+. ++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~-----~g~~~~~~~l---~~~~~~~~~SPD--G~~la~~~-~~ 130 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS-----NGEFVRGNEL---PRPIQYLCWSPV--GSKLAYVY-QN 130 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT-----TTEECCSSCC---CSSBCCEEECSS--TTCEEEEE-TT
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC-----CCccccceec---CcccccceECCC--CCEEEEEE-CC
Confidence 889999999999999876 7899999998 33432 222 256889999999 99998875 78
Q ss_pred eEEEEEeeeccCCCcccEEEEEe-eeccccE-----------------EeEEEeecCCCcEEEEEeCC
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSF-ESTSTQV-----------------LDVQFGVSSTSLKLVAAYSD 130 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~l~~~~~d 130 (240)
.|++|++..+ +..+.. .++...+ ..++|+| +|++|++++.|
T Consensus 131 ~i~~~~~~~g-------~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP--DG~~la~~~~d 189 (719)
T 1z68_A 131 NIYLKQRPGD-------PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP--NGKFLAYAEFN 189 (719)
T ss_dssp EEEEESSTTS-------CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT--TSSEEEEEEEE
T ss_pred eEEEEeCCCC-------CcEEEecCCCcCCeEcccccceeeeecccCcccEEECC--CCCEEEEEEEC
Confidence 9999998765 222211 1221212 4899999 99999998865
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=2.1e-15 Score=129.53 Aligned_cols=111 Identities=13% Similarity=0.059 Sum_probs=86.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCcc-----EEEEEEcCCCCCCEEEEEecC-----
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGA-----ILKVVWVPPEFGDAVACICSD----- 79 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~l~s~~~d----- 79 (240)
.....++|+|+|++|+++ |+.|++||+. +.++...+.+|... ..++.|||+ |++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAE-----YGNSSVFLENSTFDEFGHSINDYSISPD--GQFILLEYNYVKQWR 87 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETT-----TCCEEEEECTTTTTTCCSCCCEEEECTT--SSEEEEEEEEEECSS
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECC-----CCceEEEEechhhhhhcccccceEECCC--CCEEEEEECCeeeEE
Confidence 346789999999999886 8999999998 44455556665532 245889999 9999988776
Q ss_pred ----CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 80 ----GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 80 ----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
+.+.+||+.++ +. ..+..+...+...+||| +|+.|+.+. ++.|.+|++.+
T Consensus 88 ~~~~~~~~~~d~~~~-------~~-~~l~~~~~~~~~~~~SP--dG~~la~~~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 88 HSYTASYDIYDLNKR-------QL-ITEERIPNNTQWVTWSP--VGHKLAYVW-NNDIYVKIEPN 141 (740)
T ss_dssp SCEEEEEEEEETTTT-------EE-CCSSCCCTTEEEEEECS--STTCEEEEE-TTEEEEESSTT
T ss_pred EccceEEEEEECCCC-------cE-EEcccCCCcceeeEECC--CCCEEEEEE-CCeEEEEECCC
Confidence 55679999775 43 34555667899999999 999998885 68899999876
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=2.7e-14 Score=110.74 Aligned_cols=159 Identities=9% Similarity=0.072 Sum_probs=111.3
Q ss_pred ceEEEEECCCCCEEEEEe------------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec
Q 026295 11 GTTSSSWNYCGQRLATGS------------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~------------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
.+..++|+|+|++|+++. .++.|.+||+. +.+.+..+.. ...+..+.|+|+ +++++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~-----~~~~~~~~~~-~~~~~~~~~s~d--g~~l~~~-- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE-----TLSRRKAFEA-PRQITMLAWARD--GSKLYGL-- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT-----TTEEEEEEEC-CSSCCCEEECTT--SSCEEEE--
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECC-----CCcEEEEEeC-CCCcceeEECCC--CCEEEEe--
Confidence 677899999999999886 57999999997 4455555554 456788999999 9878777
Q ss_pred CCeEEEEEeeeccCC----------CcccE-------------------------------------EEEE---------
Q 026295 79 DGSLLLWEEIVEDAQ----------PLQWK-------------------------------------LCKS--------- 102 (240)
Q Consensus 79 d~~v~iwd~~~~~~~----------~~~~~-------------------------------------~~~~--------- 102 (240)
++.|.+||+..+... ...|. .+..
T Consensus 153 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 688999997643110 00000 0011
Q ss_pred ---eeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCC
Q 026295 103 ---FESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQK 179 (240)
Q Consensus 103 ---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~ 179 (240)
+..+...+..++|+| ++.+++++ ++.|.+||+.+ .+....+... ..+. +++|+|++
T Consensus 233 ~~~~~~~~~~~~~~~~s~--dg~~l~~~--~~~v~~~d~~~------~~~~~~~~~~-~~~~----------~~~~s~dg 291 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNP--AKTRAFGA--YNVLESFDLEK------NASIKRVPLP-HSYY----------SVNVSTDG 291 (337)
T ss_dssp EEEEEECSSCEEEEEECT--TSSEEEEE--ESEEEEEETTT------TEEEEEEECS-SCCC----------EEEECTTS
T ss_pred EeecCCCCCceeeEEECC--CCCEEEEe--CCeEEEEECCC------CcCcceecCC-Ccee----------eEEECCCC
Confidence 111223455689998 99988877 68999999876 4544444322 1222 88999998
Q ss_pred CCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 180 GENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 180 ~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
. +|++++.+ +.|++||+.+.+
T Consensus 292 ~-----~l~~~~~~-----~~i~v~d~~~~~ 312 (337)
T 1pby_B 292 S-----TVWLGGAL-----GDLAAYDAETLE 312 (337)
T ss_dssp C-----EEEEESBS-----SEEEEEETTTCC
T ss_pred C-----EEEEEcCC-----CcEEEEECcCCc
Confidence 7 78888777 999999987754
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.61 E-value=2.9e-14 Score=111.15 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=80.7
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCCCcEEEEeEeeec------CccEEEEEEcCCCCCCEEEEEecC----
Q 026295 11 GTTSSSWNYCGQRLA-TGSTDGTLSIFDSPDPSSSSFTCNLKTKVH------AGAILKVVWVPPEFGDAVACICSD---- 79 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~l~s~~~d---- 79 (240)
.+..++|+|+|++++ +...++.|.+||+. +.+.+..+... ...+..++|+|+ |+++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-----t~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-----TCKNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRL 116 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETT-----TTEEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCC-----CCcEEEEEEcccccccccccccceEECCC--CCEEEEEccccccc
Confidence 578899999998654 55578999999997 44555555432 223788999999 9999888865
Q ss_pred --------CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 80 --------GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 80 --------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
+.|.+||+..+.. .+.+..+..+ ..+.+++|+| ++. +++++ +.|.+||+.+
T Consensus 117 ~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~-~~~~~~~~s~--dg~-l~~~~--~~i~~~d~~~ 175 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTADGLE----AKPVRTFPMP-RQVYLMRAAD--DGS-LYVAG--PDIYKMDVKT 175 (349)
T ss_dssp SSCEEECCCEEEEEEGGGGGG----BCCSEEEECC-SSCCCEEECT--TSC-EEEES--SSEEEECTTT
T ss_pred ccccccCCCeEEEEECCCccc----cceeeeccCC-CcccceeECC--CCc-EEEcc--CcEEEEeCCC
Confidence 8999999876311 0223333333 4578899999 888 55554 3499999876
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=1.5e-12 Score=102.62 Aligned_cols=171 Identities=8% Similarity=0.011 Sum_probs=111.3
Q ss_pred cccceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCCCCEEEEEec-CCeEE
Q 026295 8 LDKGTTSSSWNYCGQRLATGST-DGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEFGDAVACICS-DGSLL 83 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~-d~~v~ 83 (240)
+...+.+++|+|+|++|+++.. ++.|++|++...+ ....+..+. .|...+..++|+|+ |+++++++. ++.|.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g--~~~~~~~~~~~~~g~~p~~~~~spd--g~~l~v~~~~~~~v~ 218 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG--EVELVGSVDAPDPGDHPRWVAMHPT--GNYLYALMEAGNRIC 218 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CEEEEEEEECSSTTCCEEEEEECTT--SSEEEEEETTTTEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC--CEEEeeeEecCCCCCCCCEeEECCC--CCEEEEEECCCCeEE
Confidence 3457889999999998887764 6799999997211 333344443 23567899999999 998887765 68999
Q ss_pred EEEeeeccCCCcc--cEEEEEeee----ccc------cEEeEE-EeecCCCcEEEEEeCCC------cEEEEEecCcccc
Q 026295 84 LWEEIVEDAQPLQ--WKLCKSFES----TST------QVLDVQ-FGVSSTSLKLVAAYSDG------HVKVYELLDPLIL 144 (240)
Q Consensus 84 iwd~~~~~~~~~~--~~~~~~~~~----~~~------~v~~~~-~~~~~~~~~l~~~~~dg------~v~iw~~~~~~~~ 144 (240)
+|++...++. .. ...+..+.. +.. .+..++ |+| +|++|++++.+. +|.+|++...
T Consensus 219 v~~~~~~~g~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp--dG~~l~v~~~~~~~~~~~~i~v~~~~~~--- 292 (365)
T 1jof_A 219 EYVIDPATHM-PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF--SGKYMFASSRANKFELQGYIAGFKLRDC--- 292 (365)
T ss_dssp EEEECTTTCC-EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT--TSSEEEEEEEESSTTSCCEEEEEEECTT---
T ss_pred EEEEeCCCCc-EEEccceEEcCCCCcCCcccccccccccccEEEECC--CCCEEEEECCCCCCCCCCeEEEEEECCC---
Confidence 9987532210 00 011112211 111 578899 999 999887766432 8999999631
Q ss_pred cceeEEe---eeecccceeeccccccceeeeEEEeC---CCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 145 KNWQLQA---EFQNAIDSVTMFRKASCISASISWNP---QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 145 ~~~~~~~---~~~~~~~~v~~~~~~~~~~~~v~~~p---~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
+++.. .+..+..... .++|+| ++. +|+++..++ +.|.||+++..
T Consensus 293 --g~~~~~~~~~~~~~~~~~----------~~a~sp~~~dg~-----~l~v~~~~~----~~v~v~~~~~~ 342 (365)
T 1jof_A 293 --GSIEKQLFLSPTPTSGGH----------SNAVSPCPWSDE-----WMAITDDQE----GWLEIYRWKDE 342 (365)
T ss_dssp --SCEEEEEEEEECSSCCTT----------CCCEEECTTCTT-----EEEEECSSS----CEEEEEEEETT
T ss_pred --CCEEEeeeeeecCCCCcc----------cceecCCCcCCC-----EEEEEEcCC----CeEEEEEEchh
Confidence 22221 1111111122 788999 676 788887654 89999999875
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=1.6e-13 Score=108.79 Aligned_cols=191 Identities=10% Similarity=0.057 Sum_probs=118.7
Q ss_pred hcccccceEE-----EEECCCCCEEEEEeC-CCc--EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEE
Q 026295 5 VATLDKGTTS-----SSWNYCGQRLATGST-DGT--LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 5 ~~~h~~~v~~-----~~~s~~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 76 (240)
+..|...... .+|+|||++|+.++. ++. |.+||+. +.+......++...+..+.|+|+ |+.|+.+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~-----~g~~~~lt~~~~~~~~~~~~spd--g~~l~~~ 98 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN-----TQVATQLTEGRGDNTFGGFLSPD--DDALFYV 98 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT-----TCEEEECCCSSCBCSSSCEECTT--SSEEEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC-----CCceEEeeeCCCCCccceEEcCC--CCEEEEE
Confidence 3444444444 789999999999887 664 7778887 44555555566656667889999 9999999
Q ss_pred ecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEE--eecCCCcEEEEEe----------------------CCCc
Q 026295 77 CSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQF--GVSSTSLKLVAAY----------------------SDGH 132 (240)
Q Consensus 77 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~~----------------------~dg~ 132 (240)
+.++.|.+||+..+ +....+..+...+....| +| ++.+++... .+..
T Consensus 99 ~~~~~l~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 99 KDGRNLMRVDLATL-------EENVVYQVPAEWVGYGTWVANS--DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp ETTTEEEEEETTTC-------CEEEEEECCTTEEEEEEEEECT--TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred eCCCeEEEEECCCC-------cceeeeechhhcccccceeECC--CCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 98999999999776 444444444444544444 56 888776432 3467
Q ss_pred EEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeC-CCCCCCCceEEEEecCCC-CCCCeEEEEEeecCC
Q 026295 133 VKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNP-QKGENQGSSFVLGFNSDT-PQLNSSKVWEFDEAH 210 (240)
Q Consensus 133 v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~-~~~~~i~iw~~~~~~ 210 (240)
|.+||+.+ .+.. .+..+...+. .+.|+| ++. .|+....+.. .....|.+++.....
T Consensus 170 l~~~d~~~------g~~~-~l~~~~~~~~----------~~~~sp~dg~-----~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 170 LMRVDLKT------GEST-VILQENQWLG----------HPIYRPYDDS-----TVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEEETTT------CCEE-EEEEESSCEE----------EEEEETTEEE-----EEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred EEEEECCC------CceE-EeecCCcccc----------ccEECCCCCC-----EEEEEEecCCCCCcceEEEEeCCCCc
Confidence 88888876 2222 2222322333 789999 876 6766664300 000356666654432
Q ss_pred CCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 211 NRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 211 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. ..+.... ....+..++|+||+.
T Consensus 228 ~-----~~l~~~~-~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 228 M-----RKVKTHA-EGESCTHEFWVPDGS 250 (388)
T ss_dssp C-----EESCCCC-TTEEEEEEEECTTSS
T ss_pred e-----EEeeeCC-CCcccccceECCCCC
Confidence 1 1111111 112578899999985
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.57 E-value=4.8e-14 Score=117.83 Aligned_cols=174 Identities=11% Similarity=0.025 Sum_probs=116.0
Q ss_pred eEEEEECCCCC--EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC----CeEEEE
Q 026295 12 TTSSSWNYCGQ--RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD----GSLLLW 85 (240)
Q Consensus 12 v~~~~~s~~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~v~iw 85 (240)
+...+|+|+|+ .+++++. +.+.|||+. +.+....... .. .++.|+|+ |+++++++.+ ..|.+|
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~-----~g~~~~l~~~-~~--~~~~~spD--G~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATE-DRVALYALD-----GGGLRELARL-PG--FGFVSDIR--GDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp BEEEEEEECSSCEEEEEECS-SCEEEEEEE-----TTEEEEEEEE-SS--CEEEEEEE--TTEEEEEEEEETTEEEEEEE
T ss_pred ceeeeeCCCCCeEEEEecCC-CCceEEEcc-----CCcEEEeecC-CC--ceEEECCC--CCEEEEEEEcCCCCeEEEEE
Confidence 44668888875 4444444 455599997 3343333333 23 78999999 9999988777 689999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC--cEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG--HVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
|+..+ + ...+..+...+..++|+| +|++|+++..++ .|.+||+.+ .+.. .+..+...+...
T Consensus 181 d~~~g-------~-~~~l~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~i~~~d~~~------~~~~-~~~~~~~~~~~~ 243 (582)
T 3o4h_A 181 NLSSG-------G-LRVFDSGEGSFSSASISP--GMKVTAGLETAREARLVTVDPRD------GSVE-DLELPSKDFSSY 243 (582)
T ss_dssp ETTTC-------C-CEEECCSSCEEEEEEECT--TSCEEEEEECSSCEEEEEECTTT------CCEE-ECCCSCSHHHHH
T ss_pred cCCCC-------C-ceEeecCCCccccceECC--CCCEEEEccCCCeeEEEEEcCCC------CcEE-EccCCCcChhhh
Confidence 98764 2 235566777889999999 999999888888 899999876 3333 333443333200
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
. .......+|+|++. ++++++.+ +.++||++ ++. . .. ....|.+++|+ |+
T Consensus 244 ~--~~~~~~~~~spdg~-----~~~~~~~~-----g~~~l~~~--g~~----~---~~---~~~~v~~~~~s-dg 293 (582)
T 3o4h_A 244 R--PTAITWLGYLPDGR-----LAVVARRE-----GRSAVFID--GER----V---EA---PQGNHGRVVLW-RG 293 (582)
T ss_dssp C--CSEEEEEEECTTSC-----EEEEEEET-----TEEEEEET--TEE----E---CC---CSSEEEEEEEE-TT
T ss_pred h--hccccceeEcCCCc-----EEEEEEcC-----CcEEEEEE--CCe----e---cc---CCCceEEEEec-CC
Confidence 0 00001223999985 88888888 99999998 221 1 11 22378899998 64
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.56 E-value=3.9e-14 Score=118.41 Aligned_cols=177 Identities=9% Similarity=-0.014 Sum_probs=115.5
Q ss_pred hcccc-cceEEEEECCCCCEEEEEeC---CCcEEEEeCCC--CCCCcEEEEeEeeecCccEEEEEEcCCCCCC--EEEEE
Q 026295 5 VATLD-KGTTSSSWNYCGQRLATGST---DGTLSIFDSPD--PSSSSFTCNLKTKVHAGAILKVVWVPPEFGD--AVACI 76 (240)
Q Consensus 5 ~~~h~-~~v~~~~~s~~~~~l~~~~~---d~~i~iw~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~--~l~s~ 76 (240)
+..|. ..+..++|+|+ +++++++. +...+||.+.. .+ .... +.. ...+...+|+|+ |+ .++++
T Consensus 59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g--~~~~---l~~-~~~~~~~~~s~d--g~~~~~~s~ 129 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG--EEQR---LEA-VKPMRILSGVDT--GEAVVFTGA 129 (582)
T ss_dssp CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT--CCEE---CTT-SCSBEEEEEEEC--SSCEEEEEE
T ss_pred eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC--cccc---ccC-CCCceeeeeCCC--CCeEEEEec
Confidence 44455 57999999999 77877775 45567766543 22 1122 221 122345678887 54 44454
Q ss_pred ecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC----CcEEEEEecCcccccceeEEee
Q 026295 77 CSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD----GHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 77 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~~~~~~ 152 (240)
..+ .+.+||+.++ +.......+ . .+++|+| +|+++++++.+ +.|.+||+.+ .+.. .
T Consensus 130 ~~~-~~~l~d~~~g-------~~~~l~~~~-~--~~~~~sp--DG~~la~~~~~~~~~~~i~~~d~~~------g~~~-~ 189 (582)
T 3o4h_A 130 TED-RVALYALDGG-------GLRELARLP-G--FGFVSDI--RGDLIAGLGFFGGGRVSLFTSNLSS------GGLR-V 189 (582)
T ss_dssp CSS-CEEEEEEETT-------EEEEEEEES-S--CEEEEEE--ETTEEEEEEEEETTEEEEEEEETTT------CCCE-E
T ss_pred CCC-CceEEEccCC-------cEEEeecCC-C--ceEEECC--CCCEEEEEEEcCCCCeEEEEEcCCC------CCce-E
Confidence 444 4559999765 443333333 2 7899999 99999988877 7899999876 2322 4
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC--eEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN--SSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~--~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
+..+...+. .++|+|++. .|+++..+ + .|++||+.++... .+. +|...+.
T Consensus 190 l~~~~~~~~----------~~~~SpDG~-----~l~~~~~~-----~~~~i~~~d~~~~~~~-----~~~---~~~~~~~ 241 (582)
T 3o4h_A 190 FDSGEGSFS----------SASISPGMK-----VTAGLETA-----REARLVTVDPRDGSVE-----DLE---LPSKDFS 241 (582)
T ss_dssp ECCSSCEEE----------EEEECTTSC-----EEEEEECS-----SCEEEEEECTTTCCEE-----ECC---CSCSHHH
T ss_pred eecCCCccc----------cceECCCCC-----EEEEccCC-----CeeEEEEEcCCCCcEE-----Ecc---CCCcChh
Confidence 444444444 899999998 78866666 7 8888988765422 222 4555777
Q ss_pred EEE--------EecCC
Q 026295 231 AVA--------WALNI 238 (240)
Q Consensus 231 ~v~--------~sp~~ 238 (240)
.++ |+||+
T Consensus 242 ~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 242 SYRPTAITWLGYLPDG 257 (582)
T ss_dssp HHCCSEEEEEEECTTS
T ss_pred hhhhccccceeEcCCC
Confidence 777 99997
No 164
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=1.2e-13 Score=108.81 Aligned_cols=175 Identities=12% Similarity=0.053 Sum_probs=119.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCC------CCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPS------SSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
.+..+++++...++++|+.+ .+.+|++.... ....+.... ..+.. |+.|+| + +.+|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d--~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--H--GDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--E--TTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--C--CCEEEEE-cCCcEEE
Confidence 58899999999999999997 56679864210 000111112 23556 999999 6 8888888 8899999
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
||+... ........+...+..+.+.+ . .+++++.||.|.+||+.+. .... ....++
T Consensus 111 ~dv~sl-------~~~~~~~~~~~~v~~i~~~~--p--~~av~~~dG~L~v~dl~~~------~~~~----~~~~Vs--- 166 (388)
T 1xip_A 111 LDLEEL-------SEFRTVTSFEKPVFQLKNVN--N--TLVILNSVNDLSALDLRTK------STKQ----LAQNVT--- 166 (388)
T ss_dssp EESSST-------TCEEEEEECSSCEEEEEECS--S--EEEEEETTSEEEEEETTTC------CEEE----EEESEE---
T ss_pred EEchhh-------hccCccceeecceeeEEecC--C--CEEEEECCCCEEEEEccCC------cccc----ccCCce---
Confidence 998765 22223444556677777755 3 2888999999999999862 2221 122344
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEee------ecCCCCCCceEEEEEecCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAEL------ALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~------~~~~~h~~~v~~v~~sp~~ 238 (240)
+++|+|.+ ++.|..| |.+++|+........ ..++ ..+.+|...|.+|.|.++.
T Consensus 167 -------~v~WSpkG-------~~vg~~d-----g~i~~~~~~~~~~~~--k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 167 -------SFDVTNSQ-------LAVLLKD-----RSFQSFAWRNGEMEK--QFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp -------EEEECSSE-------EEEEETT-----SCEEEEEEETTEEEE--EEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred -------EEEEcCCc-------eEEEEcC-----CcEEEEcCCCccccc--cceecCCcccccccCCCeeEEEEEEecCC
Confidence 99999998 5678888 999999887654210 1122 1112467799999999864
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.53 E-value=5.5e-13 Score=103.88 Aligned_cols=154 Identities=9% Similarity=-0.013 Sum_probs=107.8
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecC-ccEEEEEEcCCCCCCEEE-EEecCCeEEEEEeeecc
Q 026295 14 SSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHA-GAILKVVWVPPEFGDAVA-CICSDGSLLLWEEIVED 91 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~ 91 (240)
.++++++++++++++.++.|++||.. +.+.+..+..+. ..+..++|+|+ +++++ +...++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~-----~~~~~~~~~~~~~~~~~~~~~s~d--g~~~~v~~~~~~~i~~~d~~t~- 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVA-----SDTVYKSCVMPDKFGPGTAMMAPD--NRTAYVLNNHYGDIYGIDLDTC- 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETT-----TTEEEEEEECSSCCSSCEEEECTT--SSEEEEEETTTTEEEEEETTTT-
T ss_pred cccccCCCEEEEEeCCCCeEEEEECC-----CCcEEEEEecCCCCCCceeEECCC--CCEEEEEeCCCCcEEEEeCCCC-
Confidence 45778889999999999999999998 556666666433 25789999999 87554 5556889999998765
Q ss_pred CCCcccEEEEEeeec------cccEEeEEEeecCCCcEEEEEeCC------------CcEEEEEecCcccccceeEEeee
Q 026295 92 AQPLQWKLCKSFEST------STQVLDVQFGVSSTSLKLVAAYSD------------GHVKVYELLDPLILKNWQLQAEF 153 (240)
Q Consensus 92 ~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~d------------g~v~iw~~~~~~~~~~~~~~~~~ 153 (240)
+....+... ...+..++|+| +|+++++++.+ +.|.+||+.+.... .....+
T Consensus 76 ------~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~ 144 (349)
T 1jmx_B 76 ------KNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA---KPVRTF 144 (349)
T ss_dssp ------EEEEEEESCCSTTEEEECSSCEEECT--TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB---CCSEEE
T ss_pred ------cEEEEEEcccccccccccccceEECC--CCCEEEEEcccccccccccccCCCeEEEEECCCcccc---ceeeec
Confidence 555555432 23378899999 99989888865 89999999763211 111112
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
..+ ..+. +++|+|++. +++ ++ +.|++||..++.
T Consensus 145 ~~~-~~~~----------~~~~s~dg~-----l~~-~~-------~~i~~~d~~~~~ 177 (349)
T 1jmx_B 145 PMP-RQVY----------LMRAADDGS-----LYV-AG-------PDIYKMDVKTGK 177 (349)
T ss_dssp ECC-SSCC----------CEEECTTSC-----EEE-ES-------SSEEEECTTTCC
T ss_pred cCC-Cccc----------ceeECCCCc-----EEE-cc-------CcEEEEeCCCCc
Confidence 111 1222 788999985 444 32 569999986643
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.52 E-value=4.5e-13 Score=115.06 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=77.0
Q ss_pred EEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 13 TSSSWNYCGQRLATGSTD---------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
..++|||||++|+.++.+ +.+.+||+. +.+. ..+..|.+.+...+|||+ |+.|+.+ .++.|.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~-----~~~~-~~l~~~~~~~~~~~~SPd--G~~la~~-~~~~i~ 135 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN-----KRQL-ITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIY 135 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT-----TTEE-CCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECC-----CCcE-EEcccCCCcceeeEECCC--CCEEEEE-ECCeEE
Confidence 458899999999999876 556799998 4343 345567788999999999 9999887 478999
Q ss_pred EEEeeeccCCCcccEEEE-Eeeeccc-----------------cEEeEEEeecCCCcEEEEEeCCCc-EEEEEe
Q 026295 84 LWEEIVEDAQPLQWKLCK-SFESTST-----------------QVLDVQFGVSSTSLKLVAAYSDGH-VKVYEL 138 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~-~~~~~~~-----------------~v~~~~~~~~~~~~~l~~~~~dg~-v~iw~~ 138 (240)
+|++..+ ...+ +..++.. ....+.||| +|++|+..+.|.+ |.+|++
T Consensus 136 ~~~~~~~-------~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp--Dg~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 136 VKIEPNL-------PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP--NGTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp EESSTTS-------CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT--TSSEEEEEEEECTTCCEEEE
T ss_pred EEECCCC-------ceEEEcCCCCccceecCcccccccchhcCCCcceEECC--CCCEEEEEEEcccCCceEEE
Confidence 9998765 2111 1112211 123589999 9999998875443 555554
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=1.3e-11 Score=95.90 Aligned_cols=192 Identities=9% Similarity=0.021 Sum_probs=123.1
Q ss_pred cceEEEEECCCCCEEEEEeCC------------------------CcEEEEeCCCCCCCcEEEEeEee-ecCccEEEEEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTD------------------------GTLSIFDSPDPSSSSFTCNLKTK-VHAGAILKVVW 64 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~-~h~~~v~~~~~ 64 (240)
+.+.+++++++|+++++...+ +.|.+||.. +++.+..+. ++-.....+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-----~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-----NAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-----TCCEEEEECTTTCSSEEEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-----CCeEEeccCCCccCCceEEEE
Confidence 579999999999999888877 479999987 334444443 34457889999
Q ss_pred cCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEee---------eccccEEeEEEeecCCCcEEEEEe-CCCcEE
Q 026295 65 VPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFE---------STSTQVLDVQFGVSSTSLKLVAAY-SDGHVK 134 (240)
Q Consensus 65 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~ 134 (240)
+++ |+++++...++.|++|+..... ..+..+. .+-.....++++|. ++.++++.+ .++.|+
T Consensus 99 d~~--g~l~v~d~~~~~v~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 99 DTD--GNYWVTDVALHQVFKLDPHSKE------GPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNSRIV 169 (329)
T ss_dssp CTT--SCEEEEETTTTEEEEECTTCSS------CCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCCEEE
T ss_pred CCC--CCEEEEECCCCEEEEEeCCCCe------EEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCCeEE
Confidence 998 9988888888999999975421 1333331 23346789999762 456666665 689999
Q ss_pred EEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcc
Q 026295 135 VYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWL 214 (240)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~ 214 (240)
+|+.. +.....+........+..........++++|++. .++++...+ +.|++|+..++.
T Consensus 170 ~~~~~-------g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g----~l~v~d~~~-----~~I~~~~~~~G~---- 229 (329)
T 3fvz_A 170 QFSPS-------GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD----QLCVADREN-----GRIQCFKTDTKE---- 229 (329)
T ss_dssp EECTT-------SCEEEEECEECCSSSCCTTEESCEEEEEEETTTT----EEEEEETTT-----TEEEEEETTTCC----
T ss_pred EEcCC-------CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC----EEEEEECCC-----CEEEEEECCCCc----
Confidence 99943 3344333221110000001122234899999843 155555555 899999987543
Q ss_pred eeEeeecCCCCCCceEEEEEec
Q 026295 215 PVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 215 ~~~~~~~~~~h~~~v~~v~~sp 236 (240)
....+.. ..+...+++++|+|
T Consensus 230 ~~~~~~~-~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 230 FVREIKH-ASFGRNVFAISYIP 250 (329)
T ss_dssp EEEEECC-TTTTTCEEEEEEET
T ss_pred EEEEEec-cccCCCcceeeecC
Confidence 2223321 23556889999999
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=7.9e-12 Score=97.17 Aligned_cols=187 Identities=12% Similarity=0.040 Sum_probs=122.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe---------eecCccEEEEEEcC-CCCCCEEEEEe-c
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT---------KVHAGAILKVVWVP-PEFGDAVACIC-S 78 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~-~~~~~~l~s~~-~ 78 (240)
.....++++++|+++++...++.|++|+..... ..+..+ ..+-.....|+++| + +.++++.+ .
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~----~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~--g~lyv~d~~~ 164 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE----GPLLILGRSMQPGSDQNHFCQPTDVAVEPST--GAVFVSDGYC 164 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSS----CCSEEESBTTBCCCSTTCCSSEEEEEECTTT--CCEEEEECSS
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCe----EEEEEecccCCCCCCccccCCCcEEEEeCCC--CeEEEEeCCC
Confidence 367889999999999988889999999986321 122333 23344688999999 6 88887776 6
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeec----------cccEEeEEEeecCC-CcEEEEEeCCCcEEEEEecCcccccce
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFEST----------STQVLDVQFGVSST-SLKLVAAYSDGHVKVYELLDPLILKNW 147 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~~~~~~ 147 (240)
++.|++|+.. + ..+..+... -.....++++| + +.++++...++.|++|+..+ +
T Consensus 165 ~~~I~~~~~~-g-------~~~~~~~~~g~~~~~~~~~~~~p~gia~d~--~~g~l~v~d~~~~~I~~~~~~~------G 228 (329)
T 3fvz_A 165 NSRIVQFSPS-G-------KFVTQWGEESSGSSPRPGQFSVPHSLALVP--HLDQLCVADRENGRIQCFKTDT------K 228 (329)
T ss_dssp CCEEEEECTT-S-------CEEEEECEECCSSSCCTTEESCEEEEEEET--TTTEEEEEETTTTEEEEEETTT------C
T ss_pred CCeEEEEcCC-C-------CEEEEeccCCCCCCCCCcccCCCcEEEEEC--CCCEEEEEECCCCEEEEEECCC------C
Confidence 8999999953 2 444444322 23378999998 7 77777778889999999875 4
Q ss_pred eEEeeeecc--cceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCC--CCCCeEEEEEeecCCCCcceeEeeecCC
Q 026295 148 QLQAEFQNA--IDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDT--PQLNSSKVWEFDEAHNRWLPVAELALPE 223 (240)
Q Consensus 148 ~~~~~~~~~--~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~--~~~~~i~iw~~~~~~~~~~~~~~~~~~~ 223 (240)
+.+..+... ...+ ..++|+| +. ++++.+..-. .....|++|++.++. ....+....
T Consensus 229 ~~~~~~~~~~~~~~~----------~~~~~~p-g~-----~~~~~g~~~v~~~~~~~v~~~~~~~g~----~~~~~~~~~ 288 (329)
T 3fvz_A 229 EFVREIKHASFGRNV----------FAISYIP-GF-----LFAVNGKPYFGDQEPVQGFVMNFSSGE----IIDVFKPVR 288 (329)
T ss_dssp CEEEEECCTTTTTCE----------EEEEEET-TE-----EEEEECCCCTTCSCCCCEEEEETTTCC----EEEEECCSS
T ss_pred cEEEEEeccccCCCc----------ceeeecC-CE-----EEEeCCCEEeccCCCcEEEEEEcCCCe----EEEEEcCCC
Confidence 555554321 1222 2788888 32 2222221100 000589999987654 223332223
Q ss_pred CCCCceEEEEEecCC
Q 026295 224 DRSDEVYAVAWALNI 238 (240)
Q Consensus 224 ~h~~~v~~v~~sp~~ 238 (240)
++...+..|+++||+
T Consensus 289 ~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 289 KHFDMPHDIVASEDG 303 (329)
T ss_dssp SCCSSEEEEEECTTS
T ss_pred CccCCeeEEEECCCC
Confidence 466689999999987
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=9.5e-12 Score=98.00 Aligned_cols=69 Identities=10% Similarity=0.044 Sum_probs=53.5
Q ss_pred EEEECCCCCEEEEEeC----------CCcEEEEeCCCCCCCcEEEEeEeeec------CccEEEEEEcCCCCCCEEEEEe
Q 026295 14 SSSWNYCGQRLATGST----------DGTLSIFDSPDPSSSSFTCNLKTKVH------AGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
.++|+|+|++|+++.. ++.|.+||.. +.+.+..+... ......+.++|+ |++|+++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-----t~~~~~~i~~~~~~~~~g~~p~~i~~spd--g~~l~v~n 126 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-----KLTFEKEISLPPKRVQGLNYDGLFRQTTD--GKFIVLQN 126 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-----TCCEEEEEEECTTBCCBCCCGGGEEECTT--SSEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-----CCcEEEEEEcCccccccCCCcceEEECCC--CCEEEEEC
Confidence 7999999999999863 5789999987 55566665532 234678999999 99988876
Q ss_pred c--CCeEEEEEeee
Q 026295 78 S--DGSLLLWEEIV 89 (240)
Q Consensus 78 ~--d~~v~iwd~~~ 89 (240)
. ++.|.+||+..
T Consensus 127 ~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 127 ASPATSIGIVDVAK 140 (361)
T ss_dssp ESSSEEEEEEETTT
T ss_pred CCCCCeEEEEECCC
Confidence 4 57899999754
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=9.7e-11 Score=90.87 Aligned_cols=190 Identities=11% Similarity=0.051 Sum_probs=115.9
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC----Ce
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD----GS 81 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~ 81 (240)
..+...+.+++|+++|++++++..++.|.+||.... +.......+...+.+++|+++ +.++++...+ +.
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK-----EIKRPFVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGG 113 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC-----CEEEEEECSSSSEEEEEECTT--SCEEEEECTTSSSCCE
T ss_pred eccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC-----cEEEEeeCCCCCcceEEECCC--CcEEEEeCCCCCCCce
Confidence 344556789999999998888888999999998732 332223245678999999998 8887777665 68
Q ss_pred EEEEEeeeccCCCcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeC------CCcEEEEEecCcccccceeEEeee
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYS------DGHVKVYELLDPLILKNWQLQAEF 153 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~------dg~v~iw~~~~~~~~~~~~~~~~~ 153 (240)
|.+||...+ .....+. .....+..++++| ++.++++... .+.|..++... .+.. .+
T Consensus 114 i~~~d~~~~-------~~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~~~~~~~~l~~~~~~~------~~~~-~~ 177 (333)
T 2dg1_A 114 IFAATENGD-------NLQDIIEDLSTAYCIDDMVFDS--KGGFYFTDFRGYSTNPLGGVYYVSPDF------RTVT-PI 177 (333)
T ss_dssp EEEECTTSC-------SCEEEECSSSSCCCEEEEEECT--TSCEEEEECCCBTTBCCEEEEEECTTS------CCEE-EE
T ss_pred EEEEeCCCC-------EEEEEEccCccCCcccceEECC--CCCEEEEeccccccCCCceEEEEeCCC------CEEE-Ee
Confidence 999997654 2111111 2345688999998 8886665543 23444444332 1111 11
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEe-cCCCCCCCeEEEEEeecCCCCccee--EeeecCCCCCCceE
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGF-NSDTPQLNSSKVWEFDEAHNRWLPV--AELALPEDRSDEVY 230 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~-~dd~~~~~~i~iw~~~~~~~~~~~~--~~~~~~~~h~~~v~ 230 (240)
...... ++.++|+|++. .|.++. .+ +.|.+|++.+........ .......++ ..+.
T Consensus 178 ~~~~~~----------~~~i~~~~dg~-----~l~v~~~~~-----~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 178 IQNISV----------ANGIALSTDEK-----VLWVTETTA-----NRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp EEEESS----------EEEEEECTTSS-----EEEEEEGGG-----TEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred ecCCCc----------ccceEECCCCC-----EEEEEeCCC-----CeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 111111 23789999986 455544 45 899999986432211111 111111122 3678
Q ss_pred EEEEecCCC
Q 026295 231 AVAWALNIG 239 (240)
Q Consensus 231 ~v~~sp~~~ 239 (240)
.++++|++.
T Consensus 237 ~i~~d~~G~ 245 (333)
T 2dg1_A 237 SCCIDSDDN 245 (333)
T ss_dssp EEEEBTTCC
T ss_pred ceEECCCCC
Confidence 899998863
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=6.3e-12 Score=99.13 Aligned_cols=140 Identities=11% Similarity=0.083 Sum_probs=98.6
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 6 ATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
..+.. |+.++| ++++|+++ .++.|++||+..-. .......|+..+.++.+.++ . ++++..||.|.+|
T Consensus 85 ~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~-----~~~~~~~~~~~v~~i~~~~p--~--~av~~~dG~L~v~ 151 (388)
T 1xip_A 85 KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS-----EFRTVTSFEKPVFQLKNVNN--T--LVILNSVNDLSAL 151 (388)
T ss_dssp EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT-----CEEEEEECSSCEEEEEECSS--E--EEEEETTSEEEEE
T ss_pred eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh-----ccCccceeecceeeEEecCC--C--EEEEECCCCEEEE
Confidence 34667 999999 99999999 88999999997432 23344567778999888765 3 8888999999999
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeE--Eeeeecccceeecc
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQL--QAEFQNAIDSVTMF 163 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~~~~~~~v~~~ 163 (240)
|+..+ .... ....|++++|+| +| ++.+..||++++|+... .++ ..++.... .+...
T Consensus 152 dl~~~-------~~~~----~~~~Vs~v~WSp--kG--~~vg~~dg~i~~~~~~~------~~~~~k~~I~~Pp-~~~~~ 209 (388)
T 1xip_A 152 DLRTK-------STKQ----LAQNVTSFDVTN--SQ--LAVLLKDRSFQSFAWRN------GEMEKQFEFSLPS-ELEEL 209 (388)
T ss_dssp ETTTC-------CEEE----EEESEEEEEECS--SE--EEEEETTSCEEEEEEET------TEEEEEEEECCCH-HHHTS
T ss_pred EccCC-------cccc----ccCCceEEEEcC--Cc--eEEEEcCCcEEEEcCCC------ccccccceecCCc-ccccc
Confidence 99754 3322 346899999999 88 67899999999998875 232 33442111 00000
Q ss_pred ccccceeeeEEEeCCCC
Q 026295 164 RKASCISASISWNPQKG 180 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~ 180 (240)
..+...+.+|+|.++..
T Consensus 210 ~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 210 PVEEYSPLSVTILSPQD 226 (388)
T ss_dssp CTTTSEEEEEEESSSSE
T ss_pred cCCCeeEEEEEEecCCe
Confidence 00223445999999875
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.42 E-value=3.4e-12 Score=108.11 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=99.3
Q ss_pred EEEEC--CCCCE-EEEEeC-CCcEEEEeCC--C-CCCCcEEEEeEeee-----cCccEEEEEEcCCCCCCEEEEEecC--
Q 026295 14 SSSWN--YCGQR-LATGST-DGTLSIFDSP--D-PSSSSFTCNLKTKV-----HAGAILKVVWVPPEFGDAVACICSD-- 79 (240)
Q Consensus 14 ~~~~s--~~~~~-l~~~~~-d~~i~iw~~~--~-~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~l~s~~~d-- 79 (240)
..+|+ |||++ |+..+. +..|.++++. . . . ...+.. |...+..++|+|+ |+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~---~---~~~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~ 152 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA---V---PRPLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFT 152 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC---C---CEECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEEC
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC---C---CEeccCCccCCCCccccCcEECCC--CCEEEEEEeccc
Confidence 55555 99998 776554 4556666654 1 1 1 122333 5677889999999 9999988876
Q ss_pred --------CeEEEEEeee------ccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEEEEeCC--------CcEEEE
Q 026295 80 --------GSLLLWEEIV------EDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLVAAYSD--------GHVKVY 136 (240)
Q Consensus 80 --------~~v~iwd~~~------~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~v~iw 136 (240)
..|.+||+.. + .. ..+. .+...+..++|+| +|++|+.++.+ ..|.+|
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~-------~~-~~l~~~~~~~~~~~~~Sp--DG~~la~~~~~~~~~~~~~~~i~~~ 222 (662)
T 3azo_A 153 GEGPSDVRRFLAAVPLDGSAAADRS-------AV-RELSDDAHRFVTGPRLSP--DGRQAVWLAWDHPRMPWEGTELKTA 222 (662)
T ss_dssp SSSTTCEEEEEEEEETTSTTTTCGG-------GS-EESSCSCSSEECCCEECT--TSSEEEEEEECTTCCTTTCEEEEEE
T ss_pred CCCCCCceeEEEEEECCCCccccCC-------ce-eEEEecCCCcccCceECC--CCCEEEEEECCCCCCCCCCcEEEEE
Confidence 5788999865 3 22 2233 3446778899999 99999887755 379999
Q ss_pred EecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 137 ELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
|+...... .+.......+...+. .+.|+|++. +++++..+ +..+||.++.
T Consensus 223 d~~~~g~~--~~~~~l~~~~~~~~~----------~~~~spdg~-----l~~~~~~~-----~~~~l~~~~~ 272 (662)
T 3azo_A 223 RVTEDGRF--ADTRTLLGGPEEAIA----------QAEWAPDGS-----LIVATDRT-----GWWNLHRVDP 272 (662)
T ss_dssp EECTTSCE--EEEEEEEEETTBCEE----------EEEECTTSC-----EEEEECTT-----SSCEEEEECT
T ss_pred EECCCCcc--cccEEeCCCCCceEc----------ceEECCCCe-----EEEEECCC-----CCeEEEEEEC
Confidence 98731100 022222222233333 889999986 77777766 7556665543
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=6.9e-11 Score=89.77 Aligned_cols=155 Identities=8% Similarity=0.061 Sum_probs=109.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
..+..++++++|+++++...++.|.+|+... +.+..+. .+...+..++++++ +.++++...++.|.+|+.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g------~~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQNG------NVLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTS------CEEEEEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCCC------CEEEEeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcC
Confidence 4688999999999888888889999999752 2333333 34456899999998 888877777899999997
Q ss_pred eeccCCCcccEEEEEeeec--cccEEeEEEeecCCCcEEEEEeCCC-cEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 88 IVEDAQPLQWKLCKSFEST--STQVLDVQFGVSSTSLKLVAAYSDG-HVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
.. ..+..+... ...+..++++| +|.++++...++ .|.+|+... +.+..+..+...
T Consensus 193 ~g--------~~~~~~~~~g~~~~p~~i~~d~--~G~l~v~~~~~~~~i~~~~~~g-------~~~~~~~~~~~~----- 250 (286)
T 1q7f_A 193 EG--------QYLRQIGGEGITNYPIGVGINS--NGEILIADNHNNFNLTIFTQDG-------QLISALESKVKH----- 250 (286)
T ss_dssp TC--------CEEEEESCTTTSCSEEEEEECT--TCCEEEEECSSSCEEEEECTTS-------CEEEEEEESSCC-----
T ss_pred CC--------CEEEEEccCCccCCCcEEEECC--CCCEEEEeCCCCEEEEEECCCC-------CEEEEEcccCCC-----
Confidence 43 444455432 25678999988 898777777775 999998542 334444332111
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
..+..++++|++. ++++ +.+ +.|++|++..
T Consensus 251 ---~~~~~i~~~~~g~-----l~vs-~~~-----~~v~v~~~~~ 280 (286)
T 1q7f_A 251 ---AQCFDVALMDDGS-----VVLA-SKD-----YRLYIYRYVQ 280 (286)
T ss_dssp ---SCEEEEEEETTTE-----EEEE-ETT-----TEEEEEECSC
T ss_pred ---CcceeEEECCCCc-----EEEE-CCC-----CeEEEEEccc
Confidence 0123789999875 5555 566 9999999754
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.40 E-value=4.5e-12 Score=107.41 Aligned_cols=199 Identities=11% Similarity=-0.000 Sum_probs=120.8
Q ss_pred hhcccccceEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEE---------EEEEc--CCCCC
Q 026295 4 AVATLDKGTTSSSWNYCGQRLATG--STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAIL---------KVVWV--PPEFG 70 (240)
Q Consensus 4 ~~~~h~~~v~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~ 70 (240)
.+..|...+..++|++++-+++.. +.++...||.....+ ....+..+...+. ...|+ |+ |
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD--g 90 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG-----AEESALPAPWNVRNRVFEYSGFPWAGVPRPA--G 90 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS-----CEEESSCTTCCBCCCGGGTCCCCEEEECCSS--S
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC-----CcceeCCCCccccccccccCCccceeeeecC--C
Confidence 366788899999999887777777 567889999863221 1333444554554 56666 88 8
Q ss_pred CE-EEEEec-CCeEEEEEee--e-ccCCCcccEEEEEeee-----ccccEEeEEEeecCCCcEEEEEeCC----------
Q 026295 71 DA-VACICS-DGSLLLWEEI--V-EDAQPLQWKLCKSFES-----TSTQVLDVQFGVSSTSLKLVAAYSD---------- 130 (240)
Q Consensus 71 ~~-l~s~~~-d~~v~iwd~~--~-~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~d---------- 130 (240)
+. |+.+.. +..|.++++. . + . ...+.. +...+..++|+| +|+.|++++.+
T Consensus 91 ~~~la~~~~~~~~l~~~~~~~~g~~-------~-~~~l~~~~~~~~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 91 GPLLVFTHFGDQRLYAFEPDAPGGA-------V-PRPLTPVSAVGGGLRWADPVLLP--ERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp SCEEEEEBTTTCCEEEECTTSTTCC-------C-CEECSCCCCSTTCEEEEEEEEET--TTTEEEEEEEEECSSSTTCEE
T ss_pred CeEEEEEECCCCeEEEEcCCCCCCC-------C-CEeccCCccCCCCccccCcEECC--CCCEEEEEEecccCCCCCCce
Confidence 87 666543 4455555553 1 2 2 122222 456788999999 99999988876
Q ss_pred CcEEEEEecCcccccceeEEeeee-cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCC---CCCeEEEEEe
Q 026295 131 GHVKVYELLDPLILKNWQLQAEFQ-NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTP---QLNSSKVWEF 206 (240)
Q Consensus 131 g~v~iw~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~---~~~~i~iw~~ 206 (240)
..|.+||+.+.......+ ...+. .+...+. .++|+|++. .|+.++.+... ....|++|++
T Consensus 161 ~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~----------~~~~SpDG~-----~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA-VRELSDDAHRFVT----------GPRLSPDGR-----QAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp EEEEEEETTSTTTTCGGG-SEESSCSCSSEEC----------CCEECTTSS-----EEEEEEECTTCCTTTCEEEEEEEE
T ss_pred eEEEEEECCCCccccCCc-eeEEEecCCCccc----------CceECCCCC-----EEEEEECCCCCCCCCCcEEEEEEE
Confidence 578899987510000001 11222 2222233 789999997 78877754100 0037999998
Q ss_pred e-cCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 207 D-EAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 207 ~-~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
. ++. ......+.. +|...+..++|+||+.
T Consensus 225 ~~~g~--~~~~~~l~~--~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 225 TEDGR--FADTRTLLG--GPEEAIAQAEWAPDGS 254 (662)
T ss_dssp CTTSC--EEEEEEEEE--ETTBCEEEEEECTTSC
T ss_pred CCCCc--ccccEEeCC--CCCceEcceEECCCCe
Confidence 7 341 111111211 2455899999999973
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.39 E-value=2.9e-10 Score=86.32 Aligned_cols=181 Identities=10% Similarity=0.072 Sum_probs=119.2
Q ss_pred ccceEEEEE-CCCCCEEEEEeC-CCcEEEEeCCCCCCCcEEEEeEee-ecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 9 DKGTTSSSW-NYCGQRLATGST-DGTLSIFDSPDPSSSSFTCNLKTK-VHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 9 ~~~v~~~~~-s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
...+..+++ .++++++++... ++.|++|+... +.+..+. .+...+..+++.++ |.++++...++.|.+|
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g------~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~ 147 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG------QFVRKFGATILQHPRGVTVDNK--GRIIVVECKVMRVIIF 147 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS------CEEEEECTTTCSCEEEEEECTT--SCEEEEETTTTEEEEE
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC------cEEEEecCccCCCceEEEEeCC--CCEEEEECCCCEEEEE
Confidence 346789999 577777766643 78999999542 3344443 23456889999998 8888877778899999
Q ss_pred EeeeccCCCcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 86 EEIVEDAQPLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
+... +.+..+. .+...+..++++| ++.++++...++.|.+|+... .....+....
T Consensus 148 ~~~g--------~~~~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~~i~~~~~~g-------~~~~~~~~~g------ 204 (286)
T 1q7f_A 148 DQNG--------NVLHKFGCSKHLEFPNGVVVND--KQEIFISDNRAHCVKVFNYEG-------QYLRQIGGEG------ 204 (286)
T ss_dssp CTTS--------CEEEEEECTTTCSSEEEEEECS--SSEEEEEEGGGTEEEEEETTC-------CEEEEESCTT------
T ss_pred cCCC--------CEEEEeCCCCccCCcEEEEECC--CCCEEEEECCCCEEEEEcCCC-------CEEEEEccCC------
Confidence 9643 4444443 2335688999998 898777777889999999753 3333332211
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC-eEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN-SSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
....+..++++|++. ++++...+ + .|.+|+... . ....+.... ....+.+++|+|++
T Consensus 205 --~~~~p~~i~~d~~G~-----l~v~~~~~-----~~~i~~~~~~g-~----~~~~~~~~~-~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 205 --ITNYPIGVGINSNGE-----ILIADNHN-----NFNLTIFTQDG-Q----LISALESKV-KHAQCFDVALMDDG 262 (286)
T ss_dssp --TSCSEEEEEECTTCC-----EEEEECSS-----SCEEEEECTTS-C----EEEEEEESS-CCSCEEEEEEETTT
T ss_pred --ccCCCcEEEECCCCC-----EEEEeCCC-----CEEEEEECCCC-C----EEEEEcccC-CCCcceeEEECCCC
Confidence 001123899999886 66666555 6 999998532 2 222232221 22247899999986
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.39 E-value=3.8e-11 Score=102.72 Aligned_cols=195 Identities=10% Similarity=0.058 Sum_probs=115.8
Q ss_pred cceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCe---
Q 026295 10 KGTTSSSWNYCGQRLATGSTDG-----TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGS--- 81 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~--- 81 (240)
..+..++|||||++||.+..++ .|++||+. +++.......+ ..+..++|+|+ |+.|+.+..++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~-----tg~~~~~~~~~-~~~~~~~wspD--g~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD-----GAKELPDVLER-VKFSCMAWTHD--GKGMFYNAYPQQDGK 196 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT-----TTEEEEEEEEE-ECSCCEEECTT--SSEEEEEECCCCSSC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC-----CCCCCcccccC-cccceEEEEeC--CCEEEEEEECCcccc
Confidence 3578899999999999876543 89999998 33443322222 23678999999 999988887765
Q ss_pred -------------EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC-----CCcEEEEEecCccc
Q 026295 82 -------------LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS-----DGHVKVYELLDPLI 143 (240)
Q Consensus 82 -------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----dg~v~iw~~~~~~~ 143 (240)
|.+|++.++.. .-..+.....+...+..+.|+| +|++|+..+. +..|.+||+.+...
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~---~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQS---EDILCAEFPDEPKWMGGAELSD--DGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGG---GCEEEECCTTCTTCEEEEEECT--TSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred ccccccccCCCCEEEEEECCCCcc---cceEEeccCCCCeEEEEEEEcC--CCCEEEEEEEccCCCccEEEEEECccccc
Confidence 99999865421 0012223233445678899999 9998887764 56789999864100
Q ss_pred -ccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCC-CcceeEeeec
Q 026295 144 -LKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHN-RWLPVAELAL 221 (240)
Q Consensus 144 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~-~~~~~~~~~~ 221 (240)
.........+..+.... ...|+|++. .|+..+..+. ....|.+|++.+... .|.. +..
T Consensus 272 ~~~~~~~~~~l~~~~~~~-----------~~~~s~dg~-----~l~~~s~~~~-~~~~l~~~d~~~~~~~~~~~---l~~ 331 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGE-----------YDYVTNEGT-----VFTFKTNRHS-PNYRLINIDFTDPEESKWKV---LVP 331 (710)
T ss_dssp SSCSSCCCEEEECSSSSC-----------EEEEEEETT-----EEEEEECTTC-TTCEEEEEETTSCCGGGCEE---EEC
T ss_pred ccCCccceEEeeCCCCcE-----------EEEEeccCC-----EEEEEECCCC-CCCEEEEEeCCCCCccccee---ccC
Confidence 00000122233332222 224788876 5655554310 014688888766432 2222 211
Q ss_pred CCCCCCceEEEEEecCC
Q 026295 222 PEDRSDEVYAVAWALNI 238 (240)
Q Consensus 222 ~~~h~~~v~~v~~sp~~ 238 (240)
+. ....+..++|+|++
T Consensus 332 ~~-~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 332 EH-EKDVLEWVACVRSN 347 (710)
T ss_dssp CC-SSCEEEEEEEETTT
T ss_pred CC-CCCeEEEEEEEcCC
Confidence 11 11267889998653
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=1.7e-10 Score=89.94 Aligned_cols=167 Identities=10% Similarity=0.044 Sum_probs=103.3
Q ss_pred ccccceEEEEECCCCCEEEEEeCC---------------------------CcEEEEeCCCCCCCcEEEEeEeeecCccE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTD---------------------------GTLSIFDSPDPSSSSFTCNLKTKVHAGAI 59 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d---------------------------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v 59 (240)
.+.. +..++|+|+|+.|+.++.+ ..|.+|++.. .+.+..+.. . .+
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~-----~~~~~~l~~-~-~~ 173 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES-----EEVIEEFEK-P-RF 173 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT-----TEEEEEEEE-E-TT
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC-----CeEEeeecC-C-Cc
Confidence 3344 8899999999999888642 5688899873 333233333 3 78
Q ss_pred EEEEEcCCCCCCEEEEEecCC-------eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC-
Q 026295 60 LKVVWVPPEFGDAVACICSDG-------SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG- 131 (240)
Q Consensus 60 ~~~~~~~~~~~~~l~s~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg- 131 (240)
..+.|+|+ | +++++..+. ...||.+..+ + ...+..+ ..+..+ +| +|++|+.++.++
T Consensus 174 ~~~~~spd--g-~~~~~~~~~~~~~~~~~~~l~~~d~~-------~-~~~l~~~-~~~~~~--sp--dg~~l~~~~~~~~ 237 (347)
T 2gop_A 174 SSGIWHRD--K-IVVNVPHREIIPQYFKFWDIYIWEDG-------K-EEKMFEK-VSFYAV--DS--DGERILLYGKPEK 237 (347)
T ss_dssp CEEEEETT--E-EEEEEECCCSSCCSSCCEEEEEEETT-------E-EEEEEEE-ESEEEE--EE--CSSCEEEEECCSS
T ss_pred ccccCCCC--e-EEEEEecccccccccccccEEEeCCC-------c-eEEeccC-cceeeE--CC--CCCEEEEEEcccc
Confidence 89999999 8 777776542 4566666522 2 2223323 444443 88 999888777543
Q ss_pred -------cEEEEEecCcccccceeEEeeeecccceeeccccccceeee-EEEeCCCCCCCCceEEEEecCCCCCCCeEEE
Q 026295 132 -------HVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISAS-ISWNPQKGENQGSSFVLGFNSDTPQLNSSKV 203 (240)
Q Consensus 132 -------~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~i 203 (240)
.|.+|| + .+.......+...+. . +.|+ ++ ++++++.+ +.++|
T Consensus 238 ~~~~~~~~l~~~d--~------~~~~~l~~~~~~~~~----------~~~~~s-dg------~~~~~~~~-----~~~~l 287 (347)
T 2gop_A 238 KYMSEHNKLYIYD--G------KEVMGILDEVDRGVG----------QAKIKD-GK------VYFTLFEE-----GSVNL 287 (347)
T ss_dssp SCCCSSCEEEEEC--S------SCEEESSTTCCSEEE----------EEEEET-TE------EEEEEEET-----TEEEE
T ss_pred CCccccceEEEEC--C------CceEeccccCCcccC----------CccEEc-Cc------EEEEEecC-----CcEEE
Confidence 566666 2 222222222222332 4 7887 53 68888888 99999
Q ss_pred EEeecCCCCcceeEeeecCCCCCCceEEEEEec
Q 026295 204 WEFDEAHNRWLPVAELALPEDRSDEVYAVAWAL 236 (240)
Q Consensus 204 w~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 236 (240)
| +.++. ....+. +...|.+++|+|
T Consensus 288 ~-~~~g~----~~~~~~----~~~~v~~~~~s~ 311 (347)
T 2gop_A 288 Y-IWDGE----IKPIAK----GRHWIMGFDVDE 311 (347)
T ss_dssp E-EESSS----EEEEEC----SSSEEEEEEESS
T ss_pred E-EcCCc----eEEEec----CCCeEEeeeeeC
Confidence 9 88321 122222 344889999988
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=1.4e-10 Score=88.52 Aligned_cols=186 Identities=9% Similarity=-0.080 Sum_probs=116.4
Q ss_pred cccccceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 6 ATLDKGTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 6 ~~h~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
..+.....+++|+|+|+ +++++..++.|..|+.. .. ...+..+...+..++++++ |.++++...++.|.+
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~-----~~--~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD-----GQ--LSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRRLER 94 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----SC--EEEEESSCSSEEEEEECTT--CCEEEEETTTTEEEE
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC-----CC--eEEEECCCCCcceeeECCC--CcEEEEecCCCeEEE
Confidence 34445678999999998 78888888999999987 33 4455556778999999998 998877766789999
Q ss_pred EEeeeccCCCcccEEEEEeee----ccccEEeEEEeecCCCcEEEEEeCC---------------CcEEEEEecCccccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFES----TSTQVLDVQFGVSSTSLKLVAAYSD---------------GHVKVYELLDPLILK 145 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~~d---------------g~v~iw~~~~~~~~~ 145 (240)
||..++ +....... ....+..++++| +|.++++.... +.-.||.+...
T Consensus 95 ~d~~~g-------~~~~~~~~~~~~~~~~~~~i~~d~--~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---- 161 (296)
T 3e5z_A 95 QREPGG-------EWESIADSFEGKKLNSPNDVCLAP--DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---- 161 (296)
T ss_dssp ECSTTC-------CEEEEECEETTEECCCCCCEEECT--TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----
T ss_pred EcCCCC-------cEEEEeeccCCCCCCCCCCEEECC--CCCEEEECCccccccccccccccccCCCcEEEEECCC----
Confidence 998544 22211111 123456799988 99877763211 11245555431
Q ss_pred ceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCc-ceeEeeecCCC
Q 026295 146 NWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRW-LPVAELALPED 224 (240)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~-~~~~~~~~~~~ 224 (240)
.+.. .+..... ..+.++|+|++. +|++...+ +.|++|++.... .. .....+. .
T Consensus 162 -g~~~-~~~~~~~----------~~~gi~~s~dg~-----~lv~~~~~-----~~i~~~~~~~~g-~~~~~~~~~~---~ 215 (296)
T 3e5z_A 162 -GTLS-APIRDRV----------KPNGLAFLPSGN-----LLVSDTGD-----NATHRYCLNARG-ETEYQGVHFT---V 215 (296)
T ss_dssp -SCEE-EEECCCS----------SEEEEEECTTSC-----EEEEETTT-----TEEEEEEECSSS-CEEEEEEEEC---C
T ss_pred -CCEE-EeecCCC----------CCccEEECCCCC-----EEEEeCCC-----CeEEEEEECCCC-cCcCCCeEee---C
Confidence 1111 1111111 123899999987 66555555 899999987221 11 1111221 2
Q ss_pred CCCceEEEEEecCCC
Q 026295 225 RSDEVYAVAWALNIG 239 (240)
Q Consensus 225 h~~~v~~v~~sp~~~ 239 (240)
+...+..++++|++.
T Consensus 216 ~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 216 EPGKTDGLRVDAGGL 230 (296)
T ss_dssp SSSCCCSEEEBTTSC
T ss_pred CCCCCCeEEECCCCC
Confidence 334567788888763
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.33 E-value=2.8e-12 Score=101.61 Aligned_cols=184 Identities=5% Similarity=-0.071 Sum_probs=104.3
Q ss_pred eEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 12 TTSSSWNYCGQRLATGSTD---GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
+..++|+|+|++|+..... ..|.+|++.. .+.......+......+.|+|+ |+.|+..+.++.|.+||+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-----~~~~~l~~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-----QQAVQLTEGKGDNTFGGFISTD--ERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----TEEEECCCSSCBCTTTCEECTT--SSEEEEEETTTEEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC-----CcEEEeecCCCCccccceECCC--CCEEEEEEcCCcEEEEECC
Confidence 6778999999998877543 3678888873 3333322222222334789999 9999999988899999986
Q ss_pred eccCCCcccEEEEEeeeccccEEe-------------------EEEeecCCCcEEEEE-----eCCCcEEEEEecCcccc
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLD-------------------VQFGVSSTSLKLVAA-----YSDGHVKVYELLDPLIL 144 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~l~~~-----~~dg~v~iw~~~~~~~~ 144 (240)
.+ +.......+...... +.|+| ++..++.. ..+..|.+||+.+
T Consensus 111 ~~-------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp--dg~~~~~~~~~~~~~~~~l~~~d~~~---- 177 (396)
T 3c5m_A 111 TL-------EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP--LTSWEKFAEFYHTNPTCRLIKVDIET---- 177 (396)
T ss_dssp TC-------CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC--CCSHHHHHHHHHTCCCEEEEEEETTT----
T ss_pred CC-------CcEEEEecccccCCCCCEEEeccCCccccccccccccCC--CCcceeeeeeccCCCcceEEEEECCC----
Confidence 54 322222222221111 34556 66554433 3556788888875
Q ss_pred cceeEEeeeecccceeeccccccceeeeEEEeC-CCCCCCCceEEEEecCCCC-CCCeEEEEEeecCCCCcceeEeeecC
Q 026295 145 KNWQLQAEFQNAIDSVTMFRKASCISASISWNP-QKGENQGSSFVLGFNSDTP-QLNSSKVWEFDEAHNRWLPVAELALP 222 (240)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p-~~~~~~~~~l~~~~~dd~~-~~~~i~iw~~~~~~~~~~~~~~~~~~ 222 (240)
.+.... ..+...+. .+.|+| ++. .|+..+.+... ....|.+|++.... . ..+...
T Consensus 178 --g~~~~~-~~~~~~~~----------~~~~sp~dg~-----~l~~~~~~~~~~~~~~l~~~d~~~~~--~---~~l~~~ 234 (396)
T 3c5m_A 178 --GELEVI-HQDTAWLG----------HPIYRPFDDS-----TVGFCHEGPHDLVDARMWLVNEDGSN--V---RKIKEH 234 (396)
T ss_dssp --CCEEEE-EEESSCEE----------EEEEETTEEE-----EEEEEECSCSSSCSCCCEEEETTSCC--C---EESSCC
T ss_pred --CcEEee-ccCCcccc----------cceECCCCCC-----EEEEEecCCCCCCCceEEEEECCCCc--e---eEeecc
Confidence 222221 12222233 789999 664 56665543100 00246666654432 1 111111
Q ss_pred CCCCCceEEEEEecCCC
Q 026295 223 EDRSDEVYAVAWALNIG 239 (240)
Q Consensus 223 ~~h~~~v~~v~~sp~~~ 239 (240)
.....+..++|+||+.
T Consensus 235 -~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 235 -AEGESCTHEFWIPDGS 250 (396)
T ss_dssp -CTTEEEEEEEECTTSS
T ss_pred -CCCccccceEECCCCC
Confidence 0122588899999985
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.32 E-value=7.5e-11 Score=89.39 Aligned_cols=155 Identities=8% Similarity=-0.018 Sum_probs=108.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecC-ccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccE
Q 026295 20 CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHA-GAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWK 98 (240)
Q Consensus 20 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 98 (240)
.+++|++++.|+.|.+||.. +++.+..+..+. ..+.++.+.|+ |++++ +.++.|..||. ++ +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~-----tG~~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G-------~ 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD-----TKEIVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DG-------R 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT-----TTEEEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TS-------C
T ss_pred CCcEEEeeCCCCEEEEEECC-----CCeEEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CC-------C
Confidence 46799999999999999997 667888887765 46889999999 99888 34778999998 44 6
Q ss_pred EEEEeeec-cccEEeEEEeecCCCcEEEEEeC-CCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEe
Q 026295 99 LCKSFEST-STQVLDVQFGVSSTSLKLVAAYS-DGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWN 176 (240)
Q Consensus 99 ~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~ 176 (240)
.+..+... ...+.++.+.| +|+++++.+. ++.|..++.. ++.+.++..... +. ........++..
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~--dG~~lv~~~~~~~~v~~vd~~-------Gk~l~~~~~~~~-~~---~~~~~~~~v~~~ 133 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILP--DGNALVAWCGHPSTILEVNMK-------GEVLSKTEFETG-IE---RPHAQFRQINKN 133 (276)
T ss_dssp EEEEEECCTTCEEEEEEECT--TSCEEEEEESTTEEEEEECTT-------SCEEEEEEECCS-CS---SGGGSCSCCEEC
T ss_pred EEEEEcCCCCccccccEECC--CCCEEEEecCCCCEEEEEeCC-------CCEEEEEeccCC-CC---cccccccCceEC
Confidence 66666654 24677888888 9998888887 6666666542 344433321110 00 000011256678
Q ss_pred CCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 177 PQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 177 p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
+++. ++++...+ +.|..||.. ++..|..
T Consensus 134 ~~G~-----~lv~~~~~-----~~v~~~d~~-G~~~w~~ 161 (276)
T 3no2_A 134 KKGN-----YLVPLFAT-----SEVREIAPN-GQLLNSV 161 (276)
T ss_dssp TTSC-----EEEEETTT-----TEEEEECTT-SCEEEEE
T ss_pred CCCC-----EEEEecCC-----CEEEEECCC-CCEEEEE
Confidence 8876 78877777 999999987 6666654
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.31 E-value=3.8e-10 Score=87.92 Aligned_cols=109 Identities=10% Similarity=0.132 Sum_probs=73.9
Q ss_pred cceEEEEECCCCCEEEEEeCC---Cc--EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-----
Q 026295 10 KGTTSSSWNYCGQRLATGSTD---GT--LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD----- 79 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d---~~--i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----- 79 (240)
..+..++|+|+|++|+..+.+ +. |.+|++.. .+....... .. +..+.|+|+ |+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-----g~~~~l~~~-~~-~~~~~wspd--g~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-----LSSKKILEA-KN-IRSLEWNED--SRKLLIVGFKRREDE 129 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-----TEEEEEEEE-SE-EEEEEECTT--SSEEEEEEECCCC--
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-----CceEEEEcC-CC-ccceeECCC--CCEEEEEEccCCCcC
Confidence 357789999999999988754 33 77777763 333333333 34 999999999 9988877642
Q ss_pred ----------------------CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC------
Q 026295 80 ----------------------GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG------ 131 (240)
Q Consensus 80 ----------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg------ 131 (240)
..|.+||+..+ +.+..+.. . .+..+.|+| +| +++++..++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~-------~~~~~l~~-~-~~~~~~~sp--dg-~~~~~~~~~~~~~~~ 197 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE-------EVIEEFEK-P-RFSSGIWHR--DK-IVVNVPHREIIPQYF 197 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTTT-------EEEEEEEE-E-TTCEEEEET--TE-EEEEEECCCSSCCSS
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCCC-------eEEeeecC-C-CcccccCCC--Ce-EEEEEeccccccccc
Confidence 46788888654 44244443 3 788899999 88 777776542
Q ss_pred -cEEEEEec
Q 026295 132 -HVKVYELL 139 (240)
Q Consensus 132 -~v~iw~~~ 139 (240)
...+|.+.
T Consensus 198 ~~~~l~~~d 206 (347)
T 2gop_A 198 KFWDIYIWE 206 (347)
T ss_dssp CCEEEEEEE
T ss_pred ccccEEEeC
Confidence 44566554
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.29 E-value=2.3e-10 Score=87.35 Aligned_cols=185 Identities=9% Similarity=-0.004 Sum_probs=111.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe-e-ecCccEEEEEEcCCCCCCEEEEEecC-----
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT-K-VHAGAILKVVWVPPEFGDAVACICSD----- 79 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~~~l~s~~~d----- 79 (240)
.+...+.+++++++|+++++...++.|.+||.... ..+.+... . .....+..++++|+ |.++++....
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG---EWESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKP 140 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC---CEEEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCG
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC---cEEEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccc
Confidence 35567899999999998888777789999998532 22222111 1 11234678999998 9988873210
Q ss_pred ----------CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccce-e
Q 026295 80 ----------GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNW-Q 148 (240)
Q Consensus 80 ----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~ 148 (240)
+.-.||.+... + + +..+.........++|+| ++..+++.+.++.|.+|++..... . .
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g-----~-~~~~~~~~~~~~gi~~s~--dg~~lv~~~~~~~i~~~~~~~~g~---~~~ 208 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-G-----T-LSAPIRDRVKPNGLAFLP--SGNLLVSDTGDNATHRYCLNARGE---TEY 208 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-S-----C-EEEEECCCSSEEEEEECT--TSCEEEEETTTTEEEEEEECSSSC---EEE
T ss_pred cccccccccCCCcEEEEECCC-C-----C-EEEeecCCCCCccEEECC--CCCEEEEeCCCCeEEEEEECCCCc---CcC
Confidence 11244444322 1 2 223334445678899999 998887777789999999863211 1 1
Q ss_pred EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCc
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDE 228 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~ 228 (240)
....+......+ ..+++++++. ++++. + +.|.+|+... . ....+.. +..
T Consensus 209 ~~~~~~~~~~~p----------~~i~~d~~G~-----l~v~~--~-----~~v~~~~~~g-~----~~~~~~~---~~~- 257 (296)
T 3e5z_A 209 QGVHFTVEPGKT----------DGLRVDAGGL-----IWASA--G-----DGVHVLTPDG-D----ELGRVLT---PQT- 257 (296)
T ss_dssp EEEEECCSSSCC----------CSEEEBTTSC-----EEEEE--T-----TEEEEECTTS-C----EEEEEEC---SSC-
T ss_pred CCeEeeCCCCCC----------CeEEECCCCC-----EEEEc--C-----CeEEEECCCC-C----EEEEEEC---CCC-
Confidence 111221111111 2789999986 44444 5 8999999752 2 2233332 333
Q ss_pred eEEEEE-ecCCC
Q 026295 229 VYAVAW-ALNIG 239 (240)
Q Consensus 229 v~~v~~-sp~~~ 239 (240)
+++++| +|+++
T Consensus 258 ~~~~~f~~~d~~ 269 (296)
T 3e5z_A 258 TSNLCFGGPEGR 269 (296)
T ss_dssp CCEEEEESTTSC
T ss_pred ceeEEEECCCCC
Confidence 889999 47754
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.29 E-value=1.6e-09 Score=84.02 Aligned_cols=192 Identities=9% Similarity=0.015 Sum_probs=112.4
Q ss_pred cccceEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-----
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTD----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS----- 78 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~----- 78 (240)
+...+.+++|+++|+++++...+ +.|.+||.... ....+..-..+...+..+.++|+ |.++++...
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD---NLQDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTN 159 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC---SCEEEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTB
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC---EEEEEEccCccCCcccceEECCC--CCEEEEeccccccC
Confidence 45679999999999988887766 68999998743 11211110123457899999998 887776543
Q ss_pred -CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEE-EEeCCCcEEEEEecCcccccceeEEe-e-ee
Q 026295 79 -DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLV-AAYSDGHVKVYELLDPLILKNWQLQA-E-FQ 154 (240)
Q Consensus 79 -d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~-~-~~ 154 (240)
.+.|..++...+ +. ..+......+..++|+| ++..++ +.+.++.|.+|++.+.... ..... . +.
T Consensus 160 ~~~~l~~~~~~~~-------~~-~~~~~~~~~~~~i~~~~--dg~~l~v~~~~~~~i~~~d~~~~g~~--~~~~~~~~~~ 227 (333)
T 2dg1_A 160 PLGGVYYVSPDFR-------TV-TPIIQNISVANGIALST--DEKVLWVTETTANRLHRIALEDDGVT--IQPFGATIPY 227 (333)
T ss_dssp CCEEEEEECTTSC-------CE-EEEEEEESSEEEEEECT--TSSEEEEEEGGGTEEEEEEECTTSSS--EEEEEEEEEE
T ss_pred CCceEEEEeCCCC-------EE-EEeecCCCcccceEECC--CCCEEEEEeCCCCeEEEEEecCCCcC--cccccceEEE
Confidence 234444443321 11 12222234578899998 887554 4456789999998642110 11000 0 00
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC---CCCCCceEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP---EDRSDEVYA 231 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~---~~h~~~v~~ 231 (240)
.... . ..+..+++++++. ++++...+ +.|.+|+.. +. ....+... .+|...+.+
T Consensus 228 ~~~~-------~-~~~~~i~~d~~G~-----l~v~~~~~-----~~v~~~d~~-g~----~~~~~~~~~~~~g~~~~~~~ 284 (333)
T 2dg1_A 228 YFTG-------H-EGPDSCCIDSDDN-----LYVAMYGQ-----GRVLVFNKR-GY----PIGQILIPGRDEGHMLRSTH 284 (333)
T ss_dssp ECCS-------S-SEEEEEEEBTTCC-----EEEEEETT-----TEEEEECTT-SC----EEEEEECTTGGGTCSCBCCE
T ss_pred ecCC-------C-CCCCceEECCCCC-----EEEEEcCC-----CEEEEECCC-CC----EEEEEEcCCCccccccCcce
Confidence 0000 0 1123789999886 56555555 899999873 22 12222222 123336899
Q ss_pred EEEecCCC
Q 026295 232 VAWALNIG 239 (240)
Q Consensus 232 v~~sp~~~ 239 (240)
++|+||++
T Consensus 285 ~~~~~dg~ 292 (333)
T 2dg1_A 285 PQFIPGTN 292 (333)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
Confidence 99999864
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=4.4e-09 Score=80.42 Aligned_cols=189 Identities=10% Similarity=0.079 Sum_probs=111.4
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee--cCccEEEEEEcCCCCCCEEEEEecC------
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV--HAGAILKVVWVPPEFGDAVACICSD------ 79 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~d------ 79 (240)
+...+.+++++++|+++++ . +..|.+||.... ..+.+..... ....++++++.|+ |.++++....
T Consensus 52 ~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~ 124 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAV 124 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTB
T ss_pred CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCccccccc
Confidence 3467889999999996555 4 467899998632 2333322211 1245789999998 8876654322
Q ss_pred ---CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEE-EEEeCCCcEEEEEec-CcccccceeEEeeee
Q 026295 80 ---GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKL-VAAYSDGHVKVYELL-DPLILKNWQLQAEFQ 154 (240)
Q Consensus 80 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iw~~~-~~~~~~~~~~~~~~~ 154 (240)
..-.+|.+.... .... +.........++|+| +++.| ++.+.++.|.+|++. .............+.
T Consensus 125 ~~~~~~~l~~~d~~g------~~~~-~~~~~~~pngi~~sp--dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 125 LERHQGALYSLFPDH------HVKK-YFDQVDISNGLDWSL--DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp CCTTCEEEEEECTTS------CEEE-EEEEESBEEEEEECT--TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred ccCCCcEEEEEECCC------CEEE-EeeccccccceEEcC--CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 334666664321 2222 222334567899999 88765 455567889999984 111111111122222
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEE
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAW 234 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 234 (240)
...... ..+++++++. +.++.... +.|..|+..++. ....+..+ ...+++++|
T Consensus 196 ~~~~~p----------~g~~~d~~G~-----lwva~~~~-----~~v~~~d~~tG~----~~~~i~~p---~~~~t~~~f 248 (297)
T 3g4e_A 196 KEEQIP----------DGMCIDAEGK-----LWVACYNG-----GRVIRLDPVTGK----RLQTVKLP---VDKTTSCCF 248 (297)
T ss_dssp GGGCEE----------EEEEEBTTSC-----EEEEEETT-----TEEEEECTTTCC----EEEEEECS---SSBEEEEEE
T ss_pred CCCCCC----------CeeEECCCCC-----EEEEEcCC-----CEEEEEcCCCce----EEEEEECC---CCCceEEEE
Confidence 111122 3788999886 56555555 889999977554 22333332 237999999
Q ss_pred e-cCCC
Q 026295 235 A-LNIG 239 (240)
Q Consensus 235 s-p~~~ 239 (240)
. ||+.
T Consensus 249 ~g~d~~ 254 (297)
T 3g4e_A 249 GGKNYS 254 (297)
T ss_dssp ESGGGC
T ss_pred eCCCCC
Confidence 8 7753
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.23 E-value=1.6e-10 Score=91.45 Aligned_cols=175 Identities=10% Similarity=0.083 Sum_probs=101.1
Q ss_pred hcccccceEEEEECC-CCCEEEEEeCC------CcEEEEeCCCCCCCcEEEEeEeeecC--ccEEEEEEcCCCCCCEEEE
Q 026295 5 VATLDKGTTSSSWNY-CGQRLATGSTD------GTLSIFDSPDPSSSSFTCNLKTKVHA--GAILKVVWVPPEFGDAVAC 75 (240)
Q Consensus 5 ~~~h~~~v~~~~~s~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s 75 (240)
+..+...+..++|+| +|++|+....+ ..|.+++.... . ...+..+. ..+..+.|+|+ |+.|+.
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~---~~~l~~~~~~~~~~~~~~spd--g~~l~~ 254 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT---N---MRKVKTHAEGESCTHEFWVPD--GSALVY 254 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC---C---CEESCCCCTTEEEEEEEECTT--SSCEEE
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC---c---eEEeeeCCCCcccccceECCC--CCEEEE
Confidence 445566788999999 99999887764 36777777532 1 12222333 35778899999 987655
Q ss_pred Eec-CC----eEEEEEeeeccCCCcccEEEEEeeecccc---EEeEEEeecCCCcEEEEE---------eCCCcEEEEEe
Q 026295 76 ICS-DG----SLLLWEEIVEDAQPLQWKLCKSFESTSTQ---VLDVQFGVSSTSLKLVAA---------YSDGHVKVYEL 138 (240)
Q Consensus 76 ~~~-d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~---------~~dg~v~iw~~ 138 (240)
.+. ++ .|.+||+..+.. +.+..+...... ...+.|+| +|..|+.. ..+..|.+||+
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLEN-----RQLTSMPACSHLMSNYDGSLMVG--DGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCE-----EEEEEECCEEEEEECTTSSEEEE--EECCC------------CCCCEEEEEET
T ss_pred EecCCCCCcceEEEEecCCCce-----EEEEcCCCceeeeecCCCCeEcc--CCCcceeEeeeccccccCCCCEEEEEec
Confidence 433 22 399999876521 233333331111 22347999 88877654 44668999998
Q ss_pred cCcccccceeEEeeeecccceee-ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 139 LDPLILKNWQLQAEFQNAIDSVT-MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
.+ .+. ..+..+..... -.+.....+..++|+|++. .|+..+..+ +...||.++-..
T Consensus 328 ~~------~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~-----~l~~~s~~~----g~~~l~~~~l~~ 384 (388)
T 3pe7_A 328 KN------GTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDK-----QILFTSDVH----GKPALYLATLPE 384 (388)
T ss_dssp TT------TEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSS-----EEEEEECTT----SSCEEEEEECCG
T ss_pred cC------Cce-EEeccccCcccccccccccCCCCccCCCCCC-----EEEEEecCC----CceeEEEEECCh
Confidence 76 222 23333322000 0000000123789999997 666666433 788888776543
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.22 E-value=2.1e-09 Score=91.95 Aligned_cols=187 Identities=8% Similarity=-0.065 Sum_probs=114.3
Q ss_pred eEEEEECCCCCEEEEEeCCCc----------------EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEE
Q 026295 12 TTSSSWNYCGQRLATGSTDGT----------------LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVAC 75 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~----------------i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 75 (240)
+..++|+|||+.|+.++.++. |++|++.... ....++.....|...+..+.|+|+ |++|+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~ 249 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ-SEDILCAEFPDEPKWMGGAELSDD--GRYVLL 249 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG-GGCEEEECCTTCTTCEEEEEECTT--SCEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc-ccceEEeccCCCCeEEEEEEEcCC--CCEEEE
Confidence 567999999999999988766 9999986331 011233333334556789999999 998887
Q ss_pred Eec-----CCeEEEEEeee------ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC----CcEEEEEecC
Q 026295 76 ICS-----DGSLLLWEEIV------EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD----GHVKVYELLD 140 (240)
Q Consensus 76 ~~~-----d~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iw~~~~ 140 (240)
.+. +..|.+||+.. +. .....+..+...+.. .|+| +|..|+..+.. +.|.+||+.+
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~------~~~~~l~~~~~~~~~-~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGI------LKWVKLIDNFEGEYD-YVTN--EGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSS------CCCEEEECSSSSCEE-EEEE--ETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEccCCCccEEEEEECcccccccCCc------cceEEeeCCCCcEEE-EEec--cCCEEEEEECCCCCCCEEEEEeCCC
Confidence 664 56899999865 21 123334444444443 4788 77777666543 3588899876
Q ss_pred cccccceeEEeeeecccc--eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEe
Q 026295 141 PLILKNWQLQAEFQNAID--SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAE 218 (240)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~ 218 (240)
+.. ..++ .+..+.. .+. .++|.+.+. ++++...+ +..+||.++..... ....
T Consensus 321 ~~~-~~~~---~l~~~~~~~~~~----------~~~~~~~~~-----lv~~~~~~-----g~~~l~~~~~~~g~--~~~~ 374 (710)
T 2xdw_A 321 PEE-SKWK---VLVPEHEKDVLE----------WVACVRSNF-----LVLCYLHD-----VKNTLQLHDLATGA--LLKI 374 (710)
T ss_dssp CCG-GGCE---EEECCCSSCEEE----------EEEEETTTE-----EEEEEEET-----TEEEEEEEETTTCC--EEEE
T ss_pred CCc-ccce---eccCCCCCCeEE----------EEEEEcCCE-----EEEEEEEC-----CEEEEEEEECCCCC--EEEe
Confidence 311 0122 2222222 233 788886554 67777776 86666655431111 2233
Q ss_pred eecCCCCCCceEEEEEecCCC
Q 026295 219 LALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 219 ~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+.. +...|..++++|++.
T Consensus 375 l~~---~~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 375 FPL---EVGSVVGYSGQKKDT 392 (710)
T ss_dssp ECC---CSSEEEEEECCTTCS
T ss_pred cCC---CCceEEEEecCCCCC
Confidence 333 344788899999763
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.22 E-value=1.8e-10 Score=98.23 Aligned_cols=116 Identities=10% Similarity=0.032 Sum_probs=80.3
Q ss_pred cccceEEEEECCCCCEEE-----EEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccE--EEEEEcCCCCCCEEEEEecCC
Q 026295 8 LDKGTTSSSWNYCGQRLA-----TGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAI--LKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~-----~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~l~s~~~d~ 80 (240)
|...+..++|||||++|| .|+.+..|++||+.. ++.+. ..+...+ ..++|+|+ |+.|+.++.|.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t-----g~~~~--~~~~~~~~~~~~~wspD--g~~l~~~~~d~ 189 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS-----GEWSK--VDVIEGGKYATPKWTPD--SKGFYYEWLPT 189 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT-----CCBCS--SCCBSCCTTCCCEECTT--SSEEEEEECCC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC-----CCCcC--CcccCcccccceEEecC--CCEEEEEEecC
Confidence 444688999999999999 555567899999983 33220 1111222 68999999 99999988876
Q ss_pred e-------------EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC----cEEEEE
Q 026295 81 S-------------LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG----HVKVYE 137 (240)
Q Consensus 81 ~-------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----~v~iw~ 137 (240)
. |++|++.++.. .-..+.....+...+..+.|+| +|++|+..+.++ .|.+++
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~---~~~lv~~~~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPS---KDTVVHERTGDPTTFLQSDLSR--DGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGG---GCEEEECCCCCTTCEEEEEECT--TSCCEEEEEEETTTEEEEEEEC
T ss_pred CCCCccccCCCCCEEEEEECCCCch---hceEEEecCCCCEEEEEEEECC--CCCEEEEEEeCCCCceEEEEEc
Confidence 5 99999865421 0024444444556788999999 999888777665 455553
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=4.1e-10 Score=84.61 Aligned_cols=179 Identities=9% Similarity=-0.079 Sum_probs=113.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee-ecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK-VHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
..+.+++++++|+++++.. ++.|.+|+..... ...+. .....+..+++.++ |.++++...++.|.+|+..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~------~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~ 137 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN------QTVLPFDGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAAG 137 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSC------CEECCCCSCSSEEEEEECTT--CCEEEEEGGGTEEEEECTT
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCce------EeeeecCCcCCCcceEECCC--CCEEEEECCCCEEEEEECC
Confidence 4678899999999666665 8899999986431 11122 22356889999998 8877777778889998653
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccc
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASC 168 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (240)
.. ............+..++++| ++.++++...++.|.+|+.... ...........
T Consensus 138 ~~-------~~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~~i~~~~~~~~------~~~~~~~~~~~---------- 192 (270)
T 1rwi_B 138 SK-------TQTVLPFTGLNDPDGVAVDN--SGNVYVTDTDNNRVVKLEAESN------NQVVLPFTDIT---------- 192 (270)
T ss_dssp CC-------SCEECCCCSCCSCCCEEECT--TCCEEEEEGGGTEEEEECTTTC------CEEECCCSSCC----------
T ss_pred Cc-------eeEeeccccCCCceeEEEeC--CCCEEEEECCCCEEEEEecCCC------ceEeecccCCC----------
Confidence 32 11111122224568899988 8886776667789999997652 11111111111
Q ss_pred eeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 169 ISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 169 ~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
.+..+++++++. ++++...+ +.|.+|+........ .. ..+-..+.+++++|++.
T Consensus 193 ~p~~i~~d~~g~-----l~v~~~~~-----~~v~~~~~~~~~~~~-----~~--~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 193 APWGIAVDEAGT-----VYVTEHNT-----NQVVKLLAGSTTSTV-----LP--FTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp SEEEEEECTTCC-----EEEEETTT-----SCEEEECTTCSCCEE-----CC--CCSCSCEEEEEECTTCC
T ss_pred CceEEEECCCCC-----EEEEECCC-----CcEEEEcCCCCccee-----ec--cCCCCCceeEEECCCCC
Confidence 123789999875 55555555 899999875532111 11 11224789999999863
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.20 E-value=5.7e-10 Score=83.81 Aligned_cols=177 Identities=6% Similarity=-0.061 Sum_probs=109.8
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLA-TGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
...+++++++|++++ +...++.|.+|+... .........+...+..+++.++ +.++++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGS-----TGTTVLPFNGLYQPQGLAVDGA--GTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC----------EECCCCSCCSCCCEEECTT--CCEEEEET-TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCC-----cccceEeeCCcCCcceeEECCC--CCEEEEcC-CCEEEEEeCCC
Confidence 677899999999777 546778999998752 2211111223346788999998 88666655 88999999764
Q ss_pred ccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccc
Q 026295 90 EDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASC 168 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (240)
. . ...+. .....+..++++| ++.++++...++.|.+|+..+. ...........
T Consensus 97 ~-------~-~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~~i~~~~~~~~------~~~~~~~~~~~---------- 150 (270)
T 1rwi_B 97 N-------N-QTVLPFDGLNYPEGLAVDT--QGAVYVADRGNNRVVKLAAGSK------TQTVLPFTGLN---------- 150 (270)
T ss_dssp S-------C-CEECCCCSCSSEEEEEECT--TCCEEEEEGGGTEEEEECTTCC------SCEECCCCSCC----------
T ss_pred c-------e-EeeeecCCcCCCcceEECC--CCCEEEEECCCCEEEEEECCCc------eeEeeccccCC----------
Confidence 3 1 12222 2225678999988 8887777677788998865431 11111011111
Q ss_pred eeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 169 ISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 169 ~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
....++++|++. ++++...+ +.|.+|+........ ... .+...+..|+++|++
T Consensus 151 ~p~~i~~~~~g~-----l~v~~~~~-----~~i~~~~~~~~~~~~----~~~---~~~~~p~~i~~d~~g 203 (270)
T 1rwi_B 151 DPDGVAVDNSGN-----VYVTDTDN-----NRVVKLEAESNNQVV----LPF---TDITAPWGIAVDEAG 203 (270)
T ss_dssp SCCCEEECTTCC-----EEEEEGGG-----TEEEEECTTTCCEEE----CCC---SSCCSEEEEEECTTC
T ss_pred CceeEEEeCCCC-----EEEEECCC-----CEEEEEecCCCceEe----ecc---cCCCCceEEEECCCC
Confidence 123789999875 56665555 899999976543111 001 122468899999886
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.18 E-value=8.1e-09 Score=85.83 Aligned_cols=162 Identities=12% Similarity=0.016 Sum_probs=109.6
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEc----CCCCCCEEEEEec-CCeEEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWV----PPEFGDAVACICS-DGSLLL 84 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~~l~s~~~-d~~v~i 84 (240)
..+..+.|+|+|+++++++.|+.|.+||+... +.+.+..+.. ......+.|+ |+ |++++++.. ++.|.+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---t~~~v~~i~~-G~~P~~ia~s~~~~pD--Gk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMK---EPTTVAEIKI-GSEARSIETSKMEGWE--DKYAIAGAYWPPQYVI 270 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCCEEEEEEC-CSEEEEEEECCSTTCT--TTEEEEEEEETTEEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCC---CCcEeEEEec-CCCCceeEEccccCCC--CCEEEEEEccCCeEEE
Confidence 45678999999999999999999999999411 3345566654 2346789999 58 887777654 589999
Q ss_pred EEeeeccCCCcccEEEEEeeec-----------cccEEeEEEeecCCC-cEEEEEeCCCcEEEEEecCcccccceeEEee
Q 026295 85 WEEIVEDAQPLQWKLCKSFEST-----------STQVLDVQFGVSSTS-LKLVAAYSDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
+|..+. +++..+... ...+..+..++ ++ .+++....+|.|.++|...... ..+..
T Consensus 271 iD~~t~-------~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~--~~~~~vv~~~~~g~v~~vd~~~~~~----~~v~~ 337 (567)
T 1qks_A 271 MDGETL-------EPKKIQSTRGMTYDEQEYHPEPRVAAILASH--YRPEFIVNVKETGKILLVDYTDLNN----LKTTE 337 (567)
T ss_dssp EETTTC-------CEEEEEECCEECTTTCCEESCCCEEEEEECS--SSSEEEEEETTTTEEEEEETTCSSE----EEEEE
T ss_pred EECCCC-------cEEEEEeccccccccccccCCCceEEEEEcC--CCCEEEEEecCCCeEEEEecCCCcc----ceeee
Confidence 997654 666555421 12566777776 44 4555666779999999875321 11222
Q ss_pred eecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 153 FQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
+... ...+ .+.|+|++. +|+++...+ +.|.++|..+.+
T Consensus 338 i~~~-~~~~----------d~~~~pdgr-----~~~va~~~s----n~V~ViD~~t~k 375 (567)
T 1qks_A 338 ISAE-RFLH----------DGGLDGSHR-----YFITAANAR----NKLVVIDTKEGK 375 (567)
T ss_dssp EECC-SSEE----------EEEECTTSC-----EEEEEEGGG----TEEEEEETTTTE
T ss_pred eecc-cccc----------CceECCCCC-----EEEEEeCCC----CeEEEEECCCCc
Confidence 2111 1122 788999987 666665433 899999987654
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.17 E-value=5.2e-09 Score=81.21 Aligned_cols=181 Identities=9% Similarity=0.031 Sum_probs=116.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecC-----ccEEEEEEcCCCCCCEEEEEe-cCCeEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHA-----GAILKVVWVPPEFGDAVACIC-SDGSLL 83 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~-~d~~v~ 83 (240)
.....++++++++.+++...++.|.+||.. +.+....+.... .....+++ .. +.++++.. .++.|.
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-----t~~~~~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPK-----TYEITGYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRIL 155 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETT-----TTEEEEEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECC-----CCeEEEEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEE
Confidence 467889999998555554488999999998 556665555322 14556777 33 44444443 488999
Q ss_pred EEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC----------CcEEEEEecCcccccceeEEeee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD----------GHVKVYELLDPLILKNWQLQAEF 153 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----------g~v~iw~~~~~~~~~~~~~~~~~ 153 (240)
++|..++ +.+..+... .....+.++| +|++++++..+ +.|.++|..+ .+....+
T Consensus 156 viD~~t~-------~~~~~i~~g-~~p~~i~~~~--dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t------~~v~~~~ 219 (328)
T 3dsm_A 156 KIDTETD-------KVVDELTIG-IQPTSLVMDK--YNKMWTITDGGYEGSPYGYEAPSLYRIDAET------FTVEKQF 219 (328)
T ss_dssp EEETTTT-------EEEEEEECS-SCBCCCEECT--TSEEEEEBCCBCTTCSSCBCCCEEEEEETTT------TEEEEEE
T ss_pred EEECCCC-------eEEEEEEcC-CCccceEEcC--CCCEEEEECCCccCCccccCCceEEEEECCC------CeEEEEE
Confidence 9998765 666666542 3457889988 89866666554 7899999876 4554444
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEE
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVA 233 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 233 (240)
...... ..+.++|+|++. .|.++. +.|.+||..+....... .+. ........++
T Consensus 220 ~~~~g~---------~p~~la~~~d~~-----~lyv~~-------~~v~~~d~~t~~~~~~~--~~~---~~~~~p~gi~ 273 (328)
T 3dsm_A 220 KFKLGD---------WPSEVQLNGTRD-----TLYWIN-------NDIWRMPVEADRVPVRP--FLE---FRDTKYYGLT 273 (328)
T ss_dssp ECCTTC---------CCEEEEECTTSC-----EEEEES-------SSEEEEETTCSSCCSSC--SBC---CCSSCEEEEE
T ss_pred ecCCCC---------CceeEEEecCCC-----EEEEEc-------cEEEEEECCCCceeeee--eec---CCCCceEEEE
Confidence 322110 123899999886 566653 56888888665432111 111 1134688999
Q ss_pred EecCCCC
Q 026295 234 WALNIGR 240 (240)
Q Consensus 234 ~sp~~~~ 240 (240)
++|+.++
T Consensus 274 vdp~~g~ 280 (328)
T 3dsm_A 274 VNPNNGE 280 (328)
T ss_dssp ECTTTCC
T ss_pred EcCCCCe
Confidence 9997654
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=1.2e-08 Score=84.78 Aligned_cols=183 Identities=8% Similarity=-0.003 Sum_probs=118.6
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee--eccCCCc
Q 026295 18 NYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI--VEDAQPL 95 (240)
Q Consensus 18 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~--~~~~~~~ 95 (240)
++.+.++++...++.|.++|.. +.+.+..+.. ...+..+.|+|+ |+++++++.|+.|.+||+. +.
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~-----t~~v~~~i~~-g~~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~----- 230 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGS-----TYEIKTVLDT-GYAVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEP----- 230 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETT-----TCCEEEEEEC-SSCEEEEEECTT--SCEEEEEETTSEEEEEETTSSSC-----
T ss_pred CCCceEEEEeCCCCeEEEEECC-----CCeEEEEEeC-CCCccceEECCC--CCEEEEEcCCCeEEEEECCCCCC-----
Confidence 3445577777888999999998 5667777764 345779999999 9999999999999999995 33
Q ss_pred ccEEEEEeeeccccEEeEEEe----ecCCCcEEEEEe-CCCcEEEEEecCcccccceeEEeeeecccceeeccccc-cce
Q 026295 96 QWKLCKSFESTSTQVLDVQFG----VSSTSLKLVAAY-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA-SCI 169 (240)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 169 (240)
+.+..+... .....++|+ | +|+++++++ .+++|.++|..+ .+.+..+......+...+.+ ...
T Consensus 231 --~~v~~i~~G-~~P~~ia~s~~~~p--DGk~l~v~n~~~~~v~ViD~~t------~~~~~~i~~~~~~~~~~~~~p~~r 299 (567)
T 1qks_A 231 --TTVAEIKIG-SEARSIETSKMEGW--EDKYAIAGAYWPPQYVIMDGET------LEPKKIQSTRGMTYDEQEYHPEPR 299 (567)
T ss_dssp --CEEEEEECC-SEEEEEEECCSTTC--TTTEEEEEEEETTEEEEEETTT------CCEEEEEECCEECTTTCCEESCCC
T ss_pred --cEeEEEecC-CCCceeEEccccCC--CCCEEEEEEccCCeEEEEECCC------CcEEEEEeccccccccccccCCCc
Confidence 566666543 346789999 7 898777666 458999999876 55555554321110000000 001
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCC
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+..+..++.+. .+++...++ |.|.++|+...... ....+. ......++.|+||+-
T Consensus 300 va~i~~s~~~~-----~~vv~~~~~----g~v~~vd~~~~~~~--~v~~i~----~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 300 VAAILASHYRP-----EFIVNVKET----GKILLVDYTDLNNL--KTTEIS----AERFLHDGGLDGSHR 354 (567)
T ss_dssp EEEEEECSSSS-----EEEEEETTT----TEEEEEETTCSSEE--EEEEEE----CCSSEEEEEECTTSC
T ss_pred eEEEEEcCCCC-----EEEEEecCC----CeEEEEecCCCccc--eeeeee----ccccccCceECCCCC
Confidence 12566777654 344443433 99999998654321 222232 223577889999863
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.14 E-value=1.4e-08 Score=78.87 Aligned_cols=184 Identities=8% Similarity=-0.045 Sum_probs=115.4
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
.....+.+. .++++++...++.|.+||.. +++.+..+.. ......++++++ +.++++...++.|.+||..+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~-----t~~~~~~i~~-~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDIN-----TFKEVGRITG-FTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETT-----TCCEEEEEEC-CSSEEEEEEEET--TEEEEEEBSCSEEEEEETTT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECc-----ccEEEEEcCC-CCCCcEEEEeCC--CeEEEEECCCCeEEEEECCC
Confidence 346677774 35566666667999999998 5666666653 466889999888 75554544789999999876
Q ss_pred ccCCCcccEEEEEeeecc-----ccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 90 EDAQPLQWKLCKSFESTS-----TQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
. +....+.... .....+++ . ++..+++.. .++.|.++|+.+ .+....+..... .
T Consensus 115 ~-------~~~~~i~~g~~~~~~~~p~~i~~-~--~~~lyv~~~~~~~~v~viD~~t------~~~~~~i~~g~~-p--- 174 (328)
T 3dsm_A 115 Y-------EITGYIECPDMDMESGSTEQMVQ-Y--GKYVYVNCWSYQNRILKIDTET------DKVVDELTIGIQ-P--- 174 (328)
T ss_dssp T-------EEEEEEECTTCCTTTCBCCCEEE-E--TTEEEEEECTTCCEEEEEETTT------TEEEEEEECSSC-B---
T ss_pred C-------eEEEEEEcCCccccCCCcceEEE-E--CCEEEEEcCCCCCEEEEEECCC------CeEEEEEEcCCC-c---
Confidence 5 6655555332 14566777 4 565455444 488999999987 455555443221 1
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCC-CC----CCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDT-PQ----LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~-~~----~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
..+.++|++. +++++..+.. .. .+.|.++|..+.. ....+.... ....+.++|+||+
T Consensus 175 -------~~i~~~~dG~-----l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----v~~~~~~~~--g~~p~~la~~~d~ 236 (328)
T 3dsm_A 175 -------TSLVMDKYNK-----MWTITDGGYEGSPYGYEAPSLYRIDAETFT----VEKQFKFKL--GDWPSEVQLNGTR 236 (328)
T ss_dssp -------CCCEECTTSE-----EEEEBCCBCTTCSSCBCCCEEEEEETTTTE----EEEEEECCT--TCCCEEEEECTTS
T ss_pred -------cceEEcCCCC-----EEEEECCCccCCccccCCceEEEEECCCCe----EEEEEecCC--CCCceeEEEecCC
Confidence 2788899875 4444432100 00 0578888876543 222332211 2367999999987
Q ss_pred CC
Q 026295 239 GR 240 (240)
Q Consensus 239 ~~ 240 (240)
.+
T Consensus 237 ~~ 238 (328)
T 3dsm_A 237 DT 238 (328)
T ss_dssp CE
T ss_pred CE
Confidence 53
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.12 E-value=2.8e-08 Score=75.38 Aligned_cols=182 Identities=7% Similarity=-0.029 Sum_probs=116.5
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEE
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWE 86 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd 86 (240)
.+...+.+++++++|+++++...++.|.+|+.. . ..... .+..+...+..+++.++ +.++++...++.|..|+
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~---~~~~~-~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-G---KITEY-PLPTPDAKVMCLTISSD--GEVWFTENAANKIGRIT 84 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C---CEEEE-ECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEEC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C---CeEEe-cCCcccCceeeEEECCC--CCEEEeCCCCCeEEEEC
Confidence 345679999999999988877667899999987 2 22221 12234567899999988 88877776678899998
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEe-eeecccceeecccc
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQA-EFQNAIDSVTMFRK 165 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~ 165 (240)
.... ............+..++++| ++.++++...++.|..||... .... .+....
T Consensus 85 ~~g~-------~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~~g-------~~~~~~~~~~~-------- 140 (299)
T 2z2n_A 85 KKGI-------IKEYTLPNPDSAPYGITEGP--NGDIWFTEMNGNRIGRITDDG-------KIREYELPNKG-------- 140 (299)
T ss_dssp TTSC-------EEEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTTC-------CEEEEECSSTT--------
T ss_pred CCCc-------EEEEeCCCcCCCceeeEECC--CCCEEEEecCCceEEEECCCC-------CEEEecCCCCC--------
Confidence 7521 11222222345788999988 888777766778899998731 2111 111111
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
..+..+++++++. ++++...+ +.|..|+. ++. ... ..+. .....+..++++|++
T Consensus 141 --~~~~~i~~~~~g~-----l~v~~~~~-----~~i~~~~~-~g~--~~~-~~~~---~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 141 --SYPSFITLGSDNA-----LWFTENQN-----NAIGRITE-SGD--ITE-FKIP---TPASGPVGITKGNDD 194 (299)
T ss_dssp --CCEEEEEECTTSC-----EEEEETTT-----TEEEEECT-TCC--EEE-EECS---STTCCEEEEEECTTS
T ss_pred --CCCceEEEcCCCC-----EEEEeCCC-----CEEEEEcC-CCc--EEE-eeCC---CCCCcceeEEECCCC
Confidence 1223888998875 55555445 78999987 432 111 1111 223468889998875
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.09 E-value=1.7e-08 Score=76.36 Aligned_cols=158 Identities=11% Similarity=0.030 Sum_probs=109.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec-CccEEEEEEcCCCCCCEEEEEec-CCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH-AGAILKVVWVPPEFGDAVACICS-DGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~-d~~v~iwd~ 87 (240)
..+.+++++|+|++|++ .++.|..||... +.+..+..+ ...+.++.+.++ |+++++.+. ++.|..+|.
T Consensus 37 ~~~~~~~~~pdG~ilvs--~~~~V~~~d~~G------~~~W~~~~~~~~~~~~~~~~~d--G~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 37 WECNSVAATKAGEILFS--YSKGAKMITRDG------RELWNIAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp CCCCEEEECTTSCEEEE--CBSEEEEECTTS------CEEEEEECCTTCEEEEEEECTT--SCEEEEEESTTEEEEEECT
T ss_pred CCCcCeEECCCCCEEEe--CCCCEEEECCCC------CEEEEEcCCCCccccccEECCC--CCEEEEecCCCCEEEEEeC
Confidence 36889999999999883 467899999842 355556543 346888999999 999988776 666766665
Q ss_pred eeccCCCcccEEEEEeee------ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceee
Q 026295 88 IVEDAQPLQWKLCKSFES------TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVT 161 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (240)
. + +.+..+.. +......+.+.+ +|.++++...++.|..||.. ++.+.++.... ...
T Consensus 107 ~-G-------k~l~~~~~~~~~~~~~~~~~~v~~~~--~G~~lv~~~~~~~v~~~d~~-------G~~~w~~~~~~-~~~ 168 (276)
T 3no2_A 107 K-G-------EVLSKTEFETGIERPHAQFRQINKNK--KGNYLVPLFATSEVREIAPN-------GQLLNSVKLSG-TPF 168 (276)
T ss_dssp T-S-------CEEEEEEECCSCSSGGGSCSCCEECT--TSCEEEEETTTTEEEEECTT-------SCEEEEEECSS-CCC
T ss_pred C-C-------CEEEEEeccCCCCcccccccCceECC--CCCEEEEecCCCEEEEECCC-------CCEEEEEECCC-Ccc
Confidence 3 2 44444431 223455667777 99999999999999999976 24444444321 112
Q ss_pred ccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 162 MFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
.+...+++. +++++..+ +.|..+|..+++..|..
T Consensus 169 ----------~~~~~~~g~-----~~v~~~~~-----~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 169 ----------SSAFLDNGD-----CLVACGDA-----HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp ----------EEEECTTSC-----EEEECBTT-----SEEEEECTTTCCEEEEE
T ss_pred ----------ceeEcCCCC-----EEEEeCCC-----CeEEEEeCcCCcEEEEe
Confidence 566677776 67767666 78999998877766654
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.07 E-value=6.6e-09 Score=88.67 Aligned_cols=183 Identities=11% Similarity=0.032 Sum_probs=109.5
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC
Q 026295 13 TSSSWNYCGQRLATGSTDGT-------------LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD 79 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~~-------------i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 79 (240)
..++|+|||+.|+.++.|.. |++|++..... ...++.....|...+..+.|+|+ |++|+..+.+
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-KDTVVHERTGDPTTFLQSDLSRD--GKYLFVYILR 247 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-GCEEEECCCCCTTCEEEEEECTT--SCCEEEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-hceEEEecCCCCEEEEEEEECCC--CCEEEEEEeC
Confidence 67999999999999998876 99999974311 12344444456667889999999 9888877665
Q ss_pred C----eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe---CCCcEEEEEecCcccccceeEEee
Q 026295 80 G----SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY---SDGHVKVYELLDPLILKNWQLQAE 152 (240)
Q Consensus 80 ~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~v~iw~~~~~~~~~~~~~~~~ 152 (240)
+ .|.+|+...+ . ...+..+...+....+ + ++.+++... .++.|.+||+.++.. ..+. .
T Consensus 248 ~~~~~~l~~~~~~~~-----~---~~~l~~~~~~~~~~~~-~--~g~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~---~ 312 (695)
T 2bkl_A 248 GWSENDVYWKRPGEK-----D---FRLLVKGVGAKYEVHA-W--KDRFYVLTDEGAPRQRVFEVDPAKPAR-ASWK---E 312 (695)
T ss_dssp TTTEEEEEEECTTCS-----S---CEEEEECSSCCEEEEE-E--TTEEEEEECTTCTTCEEEEEBTTBCSG-GGCE---E
T ss_pred CCCceEEEEEcCCCC-----c---eEEeecCCCceEEEEe-c--CCcEEEEECCCCCCCEEEEEeCCCCCc-cCCe---E
Confidence 5 4555543221 1 2223333344555555 5 566444433 257899999865311 1122 1
Q ss_pred eecc--cceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceE
Q 026295 153 FQNA--IDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVY 230 (240)
Q Consensus 153 ~~~~--~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~ 230 (240)
+..+ ...+. .++|+ .+. ++++...+ +..+||.++.... ....+..+ ....|.
T Consensus 313 l~~~~~~~~l~----------~~~~~-~~~-----lv~~~~~d-----g~~~l~~~~~~g~---~~~~l~~~--~~~~v~ 366 (695)
T 2bkl_A 313 IVPEDSSASLL----------SVSIV-GGH-----LSLEYLKD-----ATSEVRVATLKGK---PVRTVQLP--GVGAAS 366 (695)
T ss_dssp EECCCSSCEEE----------EEEEE-TTE-----EEEEEEET-----TEEEEEEEETTCC---EEEECCCS--SSSEEC
T ss_pred EecCCCCCeEE----------EEEEE-CCE-----EEEEEEEC-----CEEEEEEEeCCCC---eeEEecCC--CCeEEE
Confidence 2222 12233 67777 332 77777777 9999998874221 12223221 234678
Q ss_pred EEEEecCCC
Q 026295 231 AVAWALNIG 239 (240)
Q Consensus 231 ~v~~sp~~~ 239 (240)
.++|+||+.
T Consensus 367 ~~~~s~d~~ 375 (695)
T 2bkl_A 367 NLMGLEDLD 375 (695)
T ss_dssp CCBSCTTCS
T ss_pred EeecCCCCC
Confidence 888888763
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=2.7e-07 Score=71.45 Aligned_cols=187 Identities=9% Similarity=0.007 Sum_probs=107.1
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee--cCccEEEEEEcCCCCCCEEEEEecC----Ce
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV--HAGAILKVVWVPPEFGDAVACICSD----GS 81 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~d----~~ 81 (240)
+...+.+++|+++|+++++. .+ .|.+||.... ..+.+..... ....+.++.++|+ |.++++...+ ..
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~ 160 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGA 160 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTC
T ss_pred CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCc
Confidence 34578999999999877765 44 4889998632 2222221111 1245889999998 8876654322 23
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEE-eCCCcEEEEEec--CcccccceeEEeeeecccc
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAA-YSDGHVKVYELL--DPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~ 158 (240)
..||.+..+ +.. .+.........++|+| +++.++.+ +.++.|.+|++. +............+.....
T Consensus 161 ~~l~~~~~g-------~~~-~~~~~~~~~~~i~~s~--dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~ 230 (326)
T 2ghs_A 161 GSIYHVAKG-------KVT-KLFADISIPNSICFSP--DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG 230 (326)
T ss_dssp EEEEEEETT-------EEE-EEEEEESSEEEEEECT--TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS
T ss_pred eEEEEEeCC-------cEE-EeeCCCcccCCeEEcC--CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC
Confidence 455555422 222 2222234567899998 88766444 456889999985 2101111111112211111
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe-cC
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA-LN 237 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-p~ 237 (240)
.. ..+++++++. ++++...+ +.|.+|+.. +. ....+.. +...+++++|+ ||
T Consensus 231 ~p----------~gi~~d~~G~-----lwva~~~~-----~~v~~~d~~-g~----~~~~i~~---~~~~~~~~af~g~d 282 (326)
T 2ghs_A 231 GM----------DGSVCDAEGH-----IWNARWGE-----GAVDRYDTD-GN----HIARYEV---PGKQTTCPAFIGPD 282 (326)
T ss_dssp EE----------EEEEECTTSC-----EEEEEETT-----TEEEEECTT-CC----EEEEEEC---SCSBEEEEEEESTT
T ss_pred CC----------CeeEECCCCC-----EEEEEeCC-----CEEEEECCC-CC----EEEEEEC---CCCCcEEEEEecCC
Confidence 11 2788888886 55555455 789999863 22 2233332 23379999998 87
Q ss_pred CC
Q 026295 238 IG 239 (240)
Q Consensus 238 ~~ 239 (240)
++
T Consensus 283 ~~ 284 (326)
T 2ghs_A 283 AS 284 (326)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.06 E-value=1.2e-07 Score=71.83 Aligned_cols=180 Identities=7% Similarity=-0.039 Sum_probs=115.4
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 9 DKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
...+.+++++++|+++++...++.|..|+... ..... .+......+..+.+.++ +.++++...++.|..||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~~~-~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG----IIKEY-TLPNPDSAPYGITEGPN--GDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEE-ECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC----cEEEE-eCCCcCCCceeeEECCC--CCEEEEecCCceEEEECC-
Confidence 35688999999999888877788899998762 22211 12224457889999988 888777767789999987
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEee-eecccceeecccccc
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAE-FQNAIDSVTMFRKAS 167 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~ 167 (240)
.+. ............+..+++++ ++.++++...++.|..||. + .+.... +.....
T Consensus 128 ~g~------~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~-~------g~~~~~~~~~~~~--------- 183 (299)
T 2z2n_A 128 DGK------IREYELPNKGSYPSFITLGS--DNALWFTENQNNAIGRITE-S------GDITEFKIPTPAS--------- 183 (299)
T ss_dssp TCC------EEEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-T------CCEEEEECSSTTC---------
T ss_pred CCC------EEEecCCCCCCCCceEEEcC--CCCEEEEeCCCCEEEEEcC-C------CcEEEeeCCCCCC---------
Confidence 321 22222223345678999988 8886666666788999987 3 222211 111111
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
.+..+++++++. ++++...+ +.|.+|+. ++. ... ..+. .+...+.+++++|++
T Consensus 184 -~~~~i~~~~~g~-----l~v~~~~~-----~~i~~~~~-~g~--~~~-~~~~---~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 184 -GPVGITKGNDDA-----LWFVEIIG-----NKIGRITT-SGE--ITE-FKIP---TPNARPHAITAGAGI 236 (299)
T ss_dssp -CEEEEEECTTSS-----EEEEETTT-----TEEEEECT-TCC--EEE-EECS---STTCCEEEEEECSTT
T ss_pred -cceeEEECCCCC-----EEEEccCC-----ceEEEECC-CCc--EEE-EECC---CCCCCceeEEECCCC
Confidence 223788998875 55554445 88999987 433 111 1111 234478999999885
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.03 E-value=1.9e-07 Score=71.41 Aligned_cols=187 Identities=9% Similarity=0.094 Sum_probs=109.4
Q ss_pred cccceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCCCcEEEE-eEee--ecCccEEEEEEcCCCCCCEEEEEecC----
Q 026295 8 LDKGTTSSSWNYC-GQRLATGSTDGTLSIFDSPDPSSSSFTCN-LKTK--VHAGAILKVVWVPPEFGDAVACICSD---- 79 (240)
Q Consensus 8 h~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d---- 79 (240)
+...+.+++++++ |+++++.. ...|.+|+.. . ....+ .... .....+.++.+.++ |.++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~ 141 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-G---TFEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAP 141 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-S---CEEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTT
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-C---CEEEEEeccCCCccccCCcCEEECCC--CCEEEEecCccccc
Confidence 4467889999999 76555544 4478889886 2 22222 1111 11235789999998 8877776554
Q ss_pred -----------CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEe----ecCCCcEEEEE-eCCCcEEEEEecCccc
Q 026295 80 -----------GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFG----VSSTSLKLVAA-YSDGHVKVYELLDPLI 143 (240)
Q Consensus 80 -----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~~~-~~dg~v~iw~~~~~~~ 143 (240)
+.|..++.. + +.... .........++|+ | ++..+..+ ..++.|.+|++.....
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g-------~~~~~-~~~~~~~~~i~~~~~~d~--dg~~l~v~~~~~~~i~~~~~~~~g~ 210 (314)
T 1pjx_A 142 ADYTRSMQEKFGSIYCFTTD-G-------QMIQV-DTAFQFPNGIAVRHMNDG--RPYQLIVAETPTKKLWSYDIKGPAK 210 (314)
T ss_dssp SCCCBTTSSSCEEEEEECTT-S-------CEEEE-EEEESSEEEEEEEECTTS--CEEEEEEEETTTTEEEEEEEEETTE
T ss_pred ccccccccCCCCeEEEECCC-C-------CEEEe-ccCCCCcceEEEecccCC--CCCEEEEEECCCCeEEEEECCCCCc
Confidence 455555543 2 22222 2223446788998 8 88655444 5678999999762111
Q ss_pred ccceeEEeeeeccc-ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC
Q 026295 144 LKNWQLQAEFQNAI-DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP 222 (240)
Q Consensus 144 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~ 222 (240)
.........+..+. .. ...+++++++. ++++...+ +.|.+|+..++... ..+..
T Consensus 211 ~~~~~~~~~~~~~~~~~----------p~~i~~d~~G~-----l~v~~~~~-----~~i~~~d~~~g~~~----~~~~~- 265 (314)
T 1pjx_A 211 IENKKVWGHIPGTHEGG----------ADGMDFDEDNN-----LLVANWGS-----SHIEVFGPDGGQPK----MRIRC- 265 (314)
T ss_dssp EEEEEEEEECCCCSSCE----------EEEEEEBTTCC-----EEEEEETT-----TEEEEECTTCBSCS----EEEEC-
T ss_pred cccceEEEECCCCCCCC----------CCceEECCCCC-----EEEEEcCC-----CEEEEEcCCCCcEe----EEEeC-
Confidence 10011111221111 11 23788999886 66665566 89999997644322 12222
Q ss_pred CCCCCceEEEEEecCCC
Q 026295 223 EDRSDEVYAVAWALNIG 239 (240)
Q Consensus 223 ~~h~~~v~~v~~sp~~~ 239 (240)
+...+.+++|+|++.
T Consensus 266 --~~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 266 --PFEKPSNLHFKPQTK 280 (314)
T ss_dssp --SSSCEEEEEECTTSS
T ss_pred --CCCCceeEEECCCCC
Confidence 334799999999874
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.02 E-value=1.3e-08 Score=80.06 Aligned_cols=144 Identities=10% Similarity=0.027 Sum_probs=98.0
Q ss_pred CCCEEEEEe------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec----------CCeEE
Q 026295 20 CGQRLATGS------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS----------DGSLL 83 (240)
Q Consensus 20 ~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~----------d~~v~ 83 (240)
+++++.+.. .|+.|.+||.. +++.+..+..+..+ .++|+|+ +++++++.. ++.|.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~-----t~~~~~~i~~g~~p--~i~~spd--g~~lyv~~~~~~~~~~g~~~~~v~ 84 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYT-----NGKFLGMVPTAFNG--HVQVSND--GKKIYTMTTYHERITRGKRSDVVE 84 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETT-----TCCEEEEEECCEEE--EEEECTT--SSEEEEEEEEETTSSSSCEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECC-----CCeEEEEecCCCCC--ceEECCC--CCEEEEEEecccccccCCCCCEEE
Confidence 566666654 36799999987 55666777765555 8999999 998888763 56799
Q ss_pred EEEeeeccCCCcccEEEEEeeec------cccEEeEEEeecCCCcEEEEEeC--CCcEEEEEecCcccccceeEEee-ee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFEST------STQVLDVQFGVSSTSLKLVAAYS--DGHVKVYELLDPLILKNWQLQAE-FQ 154 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw~~~~~~~~~~~~~~~~-~~ 154 (240)
+||..+. +.+..+... ......++|+| +|++|++++. +++|.+||+.+ .+.+.. +.
T Consensus 85 v~d~~t~-------~~~~~i~~~~~~~~~g~~p~~i~~sp--dg~~l~v~n~~~~~~v~v~d~~~------~~~~~~~i~ 149 (361)
T 2oiz_A 85 VWDADKL-------TFEKEISLPPKRVQGLNYDGLFRQTT--DGKFIVLQNASPATSIGIVDVAK------GDYVEDVTA 149 (361)
T ss_dssp EEETTTC-------CEEEEEEECTTBCCBCCCGGGEEECT--TSSEEEEEEESSSEEEEEEETTT------TEEEEEEGG
T ss_pred EEECcCC-------cEEEEEEcCccccccCCCcceEEECC--CCCEEEEECCCCCCeEEEEECCC------CcEEEEEec
Confidence 9998655 566666532 23467899999 9999988874 58999999987 455444 32
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.... . .+.+.|.+. ..+++.+.| |.+.+|+...
T Consensus 150 ~~~~--~----------~v~~~p~~~----~~~~~~~~d-----g~~~~v~~~~ 182 (361)
T 2oiz_A 150 AAGC--W----------SVIPQPNRP----RSFMTICGD-----GGLLTINLGE 182 (361)
T ss_dssp GTTE--E----------EEEECTTSS----SEEEEEETT-----SSEEEEEECT
T ss_pred CCCc--c----------eeEEcCCCC----eeEEEECCC-----CcEEEEEECC
Confidence 2110 0 244566553 155666666 7777777654
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.02 E-value=3.1e-08 Score=85.21 Aligned_cols=186 Identities=11% Similarity=0.026 Sum_probs=104.3
Q ss_pred cceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC----
Q 026295 10 KGTTSSSWNYCGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG---- 80 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~---- 80 (240)
..+..++|||||++||.++.+ ..|++||+.. ++.+.. ..+...+..++|+|+ +.|+.+..+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t-----g~~~~~-~~~~~~~~~~~wspD---~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD-----GKPLAD-ELKWVKFSGLAWLGN---DALLYSRFAEPKEG 233 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT-----CCEEEE-EEEEEESCCCEESTT---SEEEEEECCCC---
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----CCCCCc-cCCCceeccEEEECC---CEEEEEEecCcccc
Confidence 367889999999999887654 3599999984 333322 112222357899997 4455444444
Q ss_pred ----------eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC-----cEEEEEecCccccc
Q 026295 81 ----------SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG-----HVKVYELLDPLILK 145 (240)
Q Consensus 81 ----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~ 145 (240)
.|.+|++.++.. .-..+.....+...+..+.|+| +|++|+..+.++ .|.+||+.++.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~---~~~lv~~~~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~~~~l~~~d~~~~~--- 305 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQS---ADQPVFATPELPKRGHGASVSS--DGRWVVITSSEGTDPVNTVHVARVTNGK--- 305 (741)
T ss_dssp -----CCCCCEEEEEETTSCGG---GCEEEECCTTCTTCEEEEEECT--TSCEEEEEEECTTCSCCEEEEEEEETTE---
T ss_pred cccccCCCCCEEEEEECCCCch---hCEEEeccCCCCeEEEEEEECC--CCCEEEEEEEccCCCcceEEEEECCCCC---
Confidence 377888744311 0022322223334578899999 999888777544 78999987621
Q ss_pred ceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCC
Q 026295 146 NWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDR 225 (240)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h 225 (240)
.+....+..+..... .. +.|++. .|+..+.++ ...+.|.+|++.+....+. ..++ ++
T Consensus 306 -~~~~~~l~~~~~~~~----------~~-~~~dg~-----~l~~~s~~~-~~~~~l~~~d~~~~~~~~~--~l~~---~~ 362 (741)
T 1yr2_A 306 -IGPVTALIPDLKAQW----------DF-VDGVGD-----QLWFVSGDG-APLKKIVRVDLSGSTPRFD--TVVP---ES 362 (741)
T ss_dssp -ECCCEEEECSSSSCE----------EE-EEEETT-----EEEEEECTT-CTTCEEEEEECSSSSCEEE--EEEC---CC
T ss_pred -CcccEEecCCCCceE----------EE-EeccCC-----EEEEEECCC-CCCCEEEEEeCCCCccccE--EEec---CC
Confidence 010222332222111 22 347766 666666531 0015688888765321121 2222 23
Q ss_pred CCceEEEEEe
Q 026295 226 SDEVYAVAWA 235 (240)
Q Consensus 226 ~~~v~~v~~s 235 (240)
...+.+++|+
T Consensus 363 ~~~l~~~~~~ 372 (741)
T 1yr2_A 363 KDNLESVGIA 372 (741)
T ss_dssp SSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 3356677776
No 202
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.99 E-value=1.6e-08 Score=79.86 Aligned_cols=171 Identities=7% Similarity=0.014 Sum_probs=96.9
Q ss_pred cccccceEEEEECC-CCCEEEEEeCC------CcEEEEeCCCCCCCcEEEEeEeeec-CccEEEEEEcCCCCCCEEEEEe
Q 026295 6 ATLDKGTTSSSWNY-CGQRLATGSTD------GTLSIFDSPDPSSSSFTCNLKTKVH-AGAILKVVWVPPEFGDAVACIC 77 (240)
Q Consensus 6 ~~h~~~v~~~~~s~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~ 77 (240)
..+...+..+.|+| ++++|+..+.+ ..|.+|++... ..+.+. ... ...+..+.|+|+ |+.|+..+
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~--~~~~~~~~~~~~~spd--g~~l~~~~ 256 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---NVRKIK--EHAEGESCTHEFWIPD--GSAMAYVS 256 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---CCEESS--CCCTTEEEEEEEECTT--SSCEEEEE
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---ceeEee--ccCCCccccceEECCC--CCEEEEEe
Confidence 34556788999999 78877776654 35788887632 112221 111 235788999999 98777665
Q ss_pred cC-----CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe----------------CCCcEEEE
Q 026295 78 SD-----GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY----------------SDGHVKVY 136 (240)
Q Consensus 78 ~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----------------~dg~v~iw 136 (240)
.+ +.|.+||+..+.. ..+..+.. .. +.|+|. +|.++++++ .++.|.+|
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~----~~-~~~s~~-dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~ 325 (396)
T 3c5m_A 257 YFKGQTDRVIYKANPETLEN-----EEVMVMPP----CS-HLMSNF-DGSLMVGDGCDAPVDVADADSYNIENDPFLYVL 325 (396)
T ss_dssp EETTTCCEEEEEECTTTCCE-----EEEEECCS----EE-EEEECS-SSSEEEEEECCC----------CCCCCCEEEEE
T ss_pred cCCCCccceEEEEECCCCCe-----EEeeeCCC----CC-CCccCC-CCceEEEecCCcceeeccccccccCCCCcEEEE
Confidence 43 4499999865411 22222221 22 788752 566676654 34679999
Q ss_pred EecCcccccceeEEeeeecccceeec-cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 137 ELLDPLILKNWQLQAEFQNAIDSVTM-FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
|+.+. +. ..+..+...+.. ..........++|+|++. .|+..+..+ +...||.++...
T Consensus 326 d~~~~------~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~~s~~~----~~~~l~~~~~~~ 384 (396)
T 3c5m_A 326 NTKAK------SA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD-----GVLFTSDFE----GVPAIYIADVPE 384 (396)
T ss_dssp ETTTT------BC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSS-----EEEEEECTT----SSCEEEEEECCT
T ss_pred ecccC------ce-EEccCCCCccccccccccCCCCCceEccCCC-----eEEEEecCC----CCceEEEEEEcc
Confidence 98752 21 122222211000 000000012678999987 676666543 777777776443
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.98 E-value=1.5e-07 Score=75.34 Aligned_cols=163 Identities=10% Similarity=-0.060 Sum_probs=98.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC--eEEEEEee
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG--SLLLWEEI 88 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~--~v~iwd~~ 88 (240)
....++|+++++++++...++.|++||... ......... ..... ++|+++ ++.|+++..++ .|.+++..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~-----g~~~~~~~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD-----NKVTTVHPG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTT-----TEEEEEEET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCC-----CEEEEeecc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEcC
Confidence 577899999999888887789999999973 233333332 23334 999999 98888887766 67777765
Q ss_pred eccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 89 VEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
... ....+..+.. ....+..++++| ++..|..+..++.|..||..... .......... . ...
T Consensus 203 ~~~----~~~~~g~~~~~~~~~p~~iav~p--~~g~lyv~d~~~~I~~~d~~~~~----~~~~~~~~~~-g------~~~ 265 (409)
T 3hrp_A 203 SGW----APTRIGQLGSTFSGKIGAVALDE--TEEWLYFVDSNKNFGRFNVKTQE----VTLIKQLELS-G------SLG 265 (409)
T ss_dssp GTT----CEEEEEECCTTSCSCCCBCEECT--TSSEEEEECTTCEEEEEETTTCC----EEEEEECCCC-S------CCC
T ss_pred CCc----eeEEeeeccchhcCCcEEEEEeC--CCCeEEEEECCCcEEEEECCCCC----EEEEeccccc-C------CCC
Confidence 431 0012211112 345678899987 55556667778899999987521 1111110000 0 000
Q ss_pred ceee-eEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 168 CISA-SISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 168 ~~~~-~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.... .++|+|+.. .|.++.... +.|+.|+...
T Consensus 266 ~~P~~~ia~~p~~g-----~lyv~d~~~----~~I~~~~~~g 298 (409)
T 3hrp_A 266 TNPGPYLIYYFVDS-----NFYMSDQNL----SSVYKITPDG 298 (409)
T ss_dssp CSSCCEEEEETTTT-----EEEEEETTT----TEEEEECTTC
T ss_pred CCccccEEEeCCCC-----EEEEEeCCC----CEEEEEecCC
Confidence 0111 799999644 344444332 8898888654
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.97 E-value=9e-08 Score=73.27 Aligned_cols=162 Identities=13% Similarity=0.165 Sum_probs=100.6
Q ss_pred cceEEEEECCCCCEEEEEeCC---------------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEc----CCCCC
Q 026295 10 KGTTSSSWNYCGQRLATGSTD---------------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWV----PPEFG 70 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d---------------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~ 70 (240)
..+.+++++++|+++++...+ +.|..|+... .... +..+......++|+ ++ +
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----~~~~---~~~~~~~~~~i~~~~~~d~d--g 187 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG----QMIQ---VDTAFQFPNGIAVRHMNDGR--P 187 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS----CEEE---EEEEESSEEEEEEEECTTSC--E
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC----CEEE---eccCCCCcceEEEecccCCC--C
Confidence 357899999999988877655 4566666541 2222 22233456789999 88 8
Q ss_pred CEEEEE-ecCCeEEEEEeeeccCCCcccEEEEEeeecc-ccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCccccccee
Q 026295 71 DAVACI-CSDGSLLLWEEIVEDAQPLQWKLCKSFESTS-TQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 71 ~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 148 (240)
+.+..+ ..++.|.+|++... +..........+..+. ..+..+++++ +|.++++...++.|.+||..+ .+
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~i~~d~--~G~l~v~~~~~~~i~~~d~~~------g~ 258 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGP-AKIENKKVWGHIPGTHEGGADGMDFDE--DNNLLVANWGSSHIEVFGPDG------GQ 258 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEET-TEEEEEEEEEECCCCSSCEEEEEEEBT--TCCEEEEEETTTEEEEECTTC------BS
T ss_pred CEEEEEECCCCeEEEEECCCC-CccccceEEEECCCCCCCCCCceEECC--CCCEEEEEcCCCEEEEEcCCC------Cc
Confidence 655544 56789999998621 0000001222333332 4578899988 898777777788999999864 22
Q ss_pred EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
....+..+...+. +++|+|++. .|.++...+ +.|..|++..
T Consensus 259 ~~~~~~~~~~~~~----------~i~~~~dg~-----~l~v~~~~~----~~l~~~~~~~ 299 (314)
T 1pjx_A 259 PKMRIRCPFEKPS----------NLHFKPQTK-----TIFVTEHEN----NAVWKFEWQR 299 (314)
T ss_dssp CSEEEECSSSCEE----------EEEECTTSS-----EEEEEETTT----TEEEEEECSS
T ss_pred EeEEEeCCCCCce----------eEEECCCCC-----EEEEEeCCC----CeEEEEeCCC
Confidence 2223333222233 888988875 565555433 7999998764
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.93 E-value=1.1e-06 Score=67.09 Aligned_cols=184 Identities=12% Similarity=0.116 Sum_probs=105.2
Q ss_pred ceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
.-.+..|++++ .++++...++.|..||.... +. ..+ .....+.++.++++ |.++++. +..|.+||...
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~-----~~-~~~-~~~~~~~~i~~~~d--G~l~v~~--~~~l~~~d~~~ 82 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK-----QV-QRV-TMDAPVSSVALRQS--GGYVATI--GTKFCALNWKE 82 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTC-----CE-EEE-ECSSCEEEEEEBTT--SSEEEEE--TTEEEEEETTT
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCC-----cE-EEE-eCCCceEEEEECCC--CCEEEEE--CCeEEEEECCC
Confidence 45688999954 56666667889999998732 22 222 23567999999998 8865553 56788999765
Q ss_pred ccCCCcccEEEEEeee--ccccEEeEEEeecCCCcEEEEEeCC---------CcEEEEEecCcccccceeEEeeeecccc
Q 026295 90 EDAQPLQWKLCKSFES--TSTQVLDVQFGVSSTSLKLVAAYSD---------GHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
+. +..+..... ....+..++++| +|.++++.... ....+|.+... ....... ...
T Consensus 83 g~-----~~~~~~~~~~~~~~~~~di~~d~--dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-----g~~~~~~-~~~- 148 (297)
T 3g4e_A 83 QS-----AVVLATVDNDKKNNRFNDGKVDP--AGRYFAGTMAEETAPAVLERHQGALYSLFPD-----HHVKKYF-DQV- 148 (297)
T ss_dssp TE-----EEEEEECCTTCSSEEEEEEEECT--TSCEEEEEEECCSBTTBCCTTCEEEEEECTT-----SCEEEEE-EEE-
T ss_pred Cc-----EEEEEecCCCCCCCCCCCEEECC--CCCEEEecCCcccccccccCCCcEEEEEECC-----CCEEEEe-ecc-
Confidence 31 122222211 234578899988 88865544321 33466666532 1111111 110
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEE-ecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLG-FNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~-~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
...+.++|+|++. .|.++ +.+ +.|.+|+++...........+.....+......++++++
T Consensus 149 ---------~~pngi~~spdg~-----~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 149 ---------DISNGLDWSLDHK-----IFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp ---------SBEEEEEECTTSC-----EEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred ---------ccccceEEcCCCC-----EEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 1124899999986 45444 445 899999985222221111111111112235677888877
Q ss_pred C
Q 026295 238 I 238 (240)
Q Consensus 238 ~ 238 (240)
+
T Consensus 210 G 210 (297)
T 3g4e_A 210 G 210 (297)
T ss_dssp S
T ss_pred C
Confidence 5
No 206
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=5.4e-07 Score=71.82 Aligned_cols=199 Identities=10% Similarity=0.105 Sum_probs=124.7
Q ss_pred ceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCCCcEEEEeEeeecC---ccEEEEEEcCCCCCCEEEEEe----
Q 026295 11 GTTSSSWNYCGQRLATGSTD------GTLSIFDSPDPSSSSFTCNLKTKVHA---GAILKVVWVPPEFGDAVACIC---- 77 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~l~s~~---- 77 (240)
.-..+...|+| .++++..+ +.|.++|.. +.+.+.++..-. .--+.+-|+|+ ++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~-----T~~v~~~~~~~~~~~~~~Yd~~~~p~--~~~mvsS~wg~p 210 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY-----SFEPLGKWEIDRGDQYLAYDFWWNLP--NEVLVSSEWAVP 210 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT-----TCCEEEECCSBCTTCCCCCCEEEETT--TTEEEECBCCCH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC-----CCeEEEEEccCCCCccccceEEECCC--CCEEEEccCcCc
Confidence 34567888999 77777666 789999988 667777775221 22456888999 88887774
Q ss_pred ---------------cCCeEEEEEeeeccCCCcccEEEEEeeec--cccEEeEEE--eecCCCcEEEEEe------CCCc
Q 026295 78 ---------------SDGSLLLWEEIVEDAQPLQWKLCKSFEST--STQVLDVQF--GVSSTSLKLVAAY------SDGH 132 (240)
Q Consensus 78 ---------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~~~l~~~~------~dg~ 132 (240)
...+|.+||+..+ +.+.++... ......+.| +| ++.++.+++ .+++
T Consensus 211 ~~~~~g~~~~~~~~~~~d~V~v~D~~~~-------k~~~tI~vg~~g~~P~~i~f~~~P--dg~~aYV~~e~~~~~Lss~ 281 (462)
T 2ece_A 211 NTIEDGLKLEHLKDRYGNRIHFWDLRKR-------KRIHSLTLGEENRMALELRPLHDP--TKLMGFINMVVSLKDLSSS 281 (462)
T ss_dssp HHHTTCCCTTTHHHHSCCEEEEEETTTT-------EEEEEEESCTTEEEEEEEEECSST--TCCEEEEEEEEETTTCCEE
T ss_pred cccccccchhhhhhccCCEEEEEECCCC-------cEeeEEecCCCCCccceeEeeECC--CCCEEEEEEeeeccCCCce
Confidence 3679999999765 677776642 234556666 77 888776666 5678
Q ss_pred EEEEEecCcccccceeEEeeeecccceeec--------cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEE
Q 026295 133 VKVYELLDPLILKNWQLQAEFQNAIDSVTM--------FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVW 204 (240)
Q Consensus 133 v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~--------~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw 204 (240)
|.+|.... ..++..+.+......+.. ++........+.++|++. +|.++.... +.|.+|
T Consensus 282 V~v~~~d~----g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr-----fLYVSnrg~----d~Vavf 348 (462)
T 2ece_A 282 IWLWFYED----GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK-----FLYLSLWGI----GEVRQY 348 (462)
T ss_dssp EEEEEEET----TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC-----EEEEEETTT----TEEEEE
T ss_pred EEEEEecC----CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC-----EEEEEeCCC----CEEEEE
Confidence 88887753 234444443322211100 000011234899999997 777776654 899999
Q ss_pred EeecCCCCcceeEeeecCCC-----C------CCceEEEEEecCCCC
Q 026295 205 EFDEAHNRWLPVAELALPED-----R------SDEVYAVAWALNIGR 240 (240)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~-----h------~~~v~~v~~sp~~~~ 240 (240)
|+.... ...+...+..-.. | ...-..++++||+.|
T Consensus 349 dV~d~~-~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 349 DISNPF-KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp ECSSTT-SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred EecCCC-CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 986432 2334444432100 0 013588999999853
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.92 E-value=1.2e-06 Score=66.26 Aligned_cols=180 Identities=8% Similarity=0.006 Sum_probs=114.0
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 9 DKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
...+.+++++++|++.++...++.|.+|+.. . .... ..+......+..+.+.++ +.++++...++.|..+|..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~---~~~~-~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-G---RIKE-FEVPTPDAKVMCLIVSSL--GDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-S---CEEE-EECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECTT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-C---ceEE-EECCCCCCcceeEEECCC--CCEEEEecCCCeEEEECCC
Confidence 4578899999999988887778999999987 2 2222 122233467889999888 8877776667889999876
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEE-eeeecccceeecccccc
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQ-AEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 167 (240)
+. ............+..+++++ ++.++++...++.|..++... +.. ..+.....
T Consensus 92 -g~------~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~g-------~~~~~~~~~~~~--------- 146 (300)
T 2qc5_A 92 -GG------FTEYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRIGKLTADG-------TIYEYDLPNKGS--------- 146 (300)
T ss_dssp -SC------EEEEECSSTTCCEEEEEECS--TTCEEEEETTTTEEEEECTTS-------CEEEEECSSTTC---------
T ss_pred -CC------eEEecCCCCCCCCccceECC--CCCEEEEccCCCeEEEECCCC-------CEEEccCCCCCC---------
Confidence 31 22122222346688999988 888777666678888887652 111 11111111
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
.+..+++++++. ++++...+ +.|..|+. ++. ... +.. ..+...+..++++|++
T Consensus 147 -~~~~i~~d~~g~-----l~v~~~~~-----~~i~~~~~-~g~--~~~---~~~-~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 147 -YPAFITLGSDNA-----LWFTENQN-----NSIGRITN-TGK--LEE---YPL-PTNAAAPVGITSGNDG 199 (300)
T ss_dssp -CEEEEEECTTSS-----EEEEETTT-----TEEEEECT-TCC--EEE---EEC-SSTTCCEEEEEECTTS
T ss_pred -CceeEEECCCCC-----EEEEecCC-----CeEEEECC-CCc--EEE---eeC-CCCCCCcceEEECCCC
Confidence 123788998875 55554445 78888887 322 111 111 1233468889998875
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.91 E-value=4.5e-07 Score=77.98 Aligned_cols=184 Identities=12% Similarity=0.046 Sum_probs=109.5
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec
Q 026295 13 TSSSWNYCGQRLATGSTDGT--------------LSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~~--------------i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
..++|+|| +.|+.++.++. |++|++..... ...++.....+...+..+.|+|+ |++|+..+.
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~ 287 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-ADQPVFATPELPKRGHGASVSSD--GRWVVITSS 287 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECTT--SCEEEEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-hCEEEeccCCCCeEEEEEEECCC--CCEEEEEEE
Confidence 57899999 99998887654 88888853210 11233333333345889999999 998887765
Q ss_pred CC-----eEEEEEeeeccCCCcccEE-EEEeeeccccEEeEEEeecCCCcEEEEEeCC----CcEEEEEecCccccccee
Q 026295 79 DG-----SLLLWEEIVEDAQPLQWKL-CKSFESTSTQVLDVQFGVSSTSLKLVAAYSD----GHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 79 d~-----~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~~ 148 (240)
++ .|.+||+..+. .. ...+..+...+... ++| ++..|+..+.+ +.|.+||+.++. ..+.
T Consensus 288 ~~~~~~~~l~~~d~~~~~------~~~~~~l~~~~~~~~~~-~~~--dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~ 356 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGK------IGPVTALIPDLKAQWDF-VDG--VGDQLWFVSGDGAPLKKIVRVDLSGST--PRFD 356 (741)
T ss_dssp CTTCSCCEEEEEEEETTE------ECCCEEEECSSSSCEEE-EEE--ETTEEEEEECTTCTTCEEEEEECSSSS--CEEE
T ss_pred ccCCCcceEEEEECCCCC------CcccEEecCCCCceEEE-Eec--cCCEEEEEECCCCCCCEEEEEeCCCCc--cccE
Confidence 44 89999987541 11 23333333344444 347 77777777653 458889886531 1122
Q ss_pred EEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCc
Q 026295 149 LQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDE 228 (240)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~ 228 (240)
..+..+...+. .++|. .+. ++++...+ +..+||.++.... ....+.. .+...
T Consensus 357 --~l~~~~~~~l~----------~~~~~-~~~-----lv~~~~~d-----g~~~l~~~~~~g~---~~~~l~~--~~~~~ 408 (741)
T 1yr2_A 357 --TVVPESKDNLE----------SVGIA-GNR-----LFASYIHD-----AKSQVLAFDLDGK---PAGAVSL--PGIGS 408 (741)
T ss_dssp --EEECCCSSEEE----------EEEEE-BTE-----EEEEEEET-----TEEEEEEEETTSC---EEEECBC--SSSCE
T ss_pred --EEecCCCCeEE----------EEEEE-CCE-----EEEEEEEC-----CEEEEEEEeCCCC---ceeeccC--CCCeE
Confidence 11222222222 56776 222 67777777 9988888763221 2222322 12347
Q ss_pred eEEEEEecCCC
Q 026295 229 VYAVAWALNIG 239 (240)
Q Consensus 229 v~~v~~sp~~~ 239 (240)
|..++|+||+.
T Consensus 409 v~~~~~s~d~~ 419 (741)
T 1yr2_A 409 ASGLSGRPGDR 419 (741)
T ss_dssp EEEEECCBTCS
T ss_pred EEEeecCCCCC
Confidence 88999999864
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.88 E-value=2.5e-07 Score=70.91 Aligned_cols=182 Identities=7% Similarity=-0.039 Sum_probs=106.0
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEe-Eeee-cCccEEEEEEcCCCCCCEEEE----Eec--
Q 026295 7 TLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNL-KTKV-HAGAILKVVWVPPEFGDAVAC----ICS-- 78 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~~-h~~~v~~~~~~~~~~~~~l~s----~~~-- 78 (240)
.+...+..++++++|+++++...++.|.+|+... ..+.+. ...+ ....++++.+.++ |.+.++ +..
T Consensus 83 ~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g----~~~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~ 156 (305)
T 3dr2_A 83 DATAFTNGNAVDAQQRLVHCEHGRRAITRSDADG----QAHLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKP 156 (305)
T ss_dssp ESCSCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCG
T ss_pred CCCCccceeeECCCCCEEEEECCCCEEEEECCCC----CEEEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCcccc
Confidence 3445688999999999777666667899998752 222221 1111 1234678999998 987775 321
Q ss_pred -----------CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC------CcEEEEEecCc
Q 026295 79 -----------DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD------GHVKVYELLDP 141 (240)
Q Consensus 79 -----------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~v~iw~~~~~ 141 (240)
.+.|..+|...+. +..+. .......++|+| ++..|..+... +.|.+|++...
T Consensus 157 ~~~~~~~~~~~~~~v~~~d~~~g~-----~~~~~----~~~~p~gl~~sp--dg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 157 SQGCPADPELAHHSVYRLPPDGSP-----LQRMA----DLDHPNGLAFSP--DEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp GGSCCCCCSSSCEEEEEECSSSCC-----CEEEE----EESSEEEEEECT--TSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred ccccccccccCCCeEEEEcCCCCc-----EEEEe----cCCCCcceEEcC--CCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 1345555553331 12221 224567899999 99877776654 68999998753
Q ss_pred ccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeec
Q 026295 142 LILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELAL 221 (240)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~ 221 (240)
. +......... .... ...+++++++. |.++.. +.|.+|+... . ....+..
T Consensus 226 ~-l~~~~~~~~~--~~~~----------pdgi~~d~~G~------lwv~~~------~gv~~~~~~g-~----~~~~~~~ 275 (305)
T 3dr2_A 226 A-LHDRRHFASV--PDGL----------PDGFCVDRGGW------LWSSSG------TGVCVFDSDG-Q----LLGHIPT 275 (305)
T ss_dssp E-EEEEEEEECC--SSSC----------CCSEEECTTSC------EEECCS------SEEEEECTTS-C----EEEEEEC
T ss_pred C-ccCCeEEEEC--CCCC----------CCeEEECCCCC------EEEecC------CcEEEECCCC-C----EEEEEEC
Confidence 1 1111111110 1111 12688888885 444544 4588888632 1 2233332
Q ss_pred CCCCCCceEEEEEecCCC
Q 026295 222 PEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 222 ~~~h~~~v~~v~~sp~~~ 239 (240)
.. .+.+++|+|+++
T Consensus 276 ~~----~~~~~~f~~d~~ 289 (305)
T 3dr2_A 276 PG----TASNCTFDQAQQ 289 (305)
T ss_dssp SS----CCCEEEECTTSC
T ss_pred CC----ceeEEEEeCCCC
Confidence 22 588999998764
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.88 E-value=1.8e-06 Score=65.37 Aligned_cols=179 Identities=7% Similarity=-0.011 Sum_probs=112.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
..+..++++++|++.++...++.|..||... ... ...+......+..+++.++ +.++++...++.|..++..
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g----~~~-~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKKG----GFT-EYPLPQPDSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEE-EEECSSTTCCEEEEEECST--TCEEEEETTTTEEEEECTT-
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCCC----CeE-EecCCCCCCCCccceECCC--CCEEEEccCCCeEEEECCC-
Confidence 5688999999999888777678899998762 222 1222223456889999888 8877776667889888875
Q ss_pred ccCCCcccEEE-EEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccc
Q 026295 90 EDAQPLQWKLC-KSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASC 168 (240)
Q Consensus 90 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (240)
+ +.. ..+......+..+++++ ++.+.++...++.|..++... +... +.... ...
T Consensus 134 g-------~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~~i~~~~~~g-------~~~~-~~~~~--------~~~ 188 (300)
T 2qc5_A 134 G-------TIYEYDLPNKGSYPAFITLGS--DNALWFTENQNNSIGRITNTG-------KLEE-YPLPT--------NAA 188 (300)
T ss_dssp S-------CEEEEECSSTTCCEEEEEECT--TSSEEEEETTTTEEEEECTTC-------CEEE-EECSS--------TTC
T ss_pred C-------CEEEccCCCCCCCceeEEECC--CCCEEEEecCCCeEEEECCCC-------cEEE-eeCCC--------CCC
Confidence 3 222 22333345678899988 888666655577888888732 2211 11100 011
Q ss_pred eeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 169 ISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 169 ~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
.+..+++++++. ++++.... +.|.+|+. ++. ... ..+. .+...+.+++++|++
T Consensus 189 ~~~~i~~d~~g~-----l~v~~~~~-----~~i~~~~~-~g~--~~~-~~~~---~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 189 APVGITSGNDGA-----LWFVEIMG-----NKIGRITT-TGE--ISE-YDIP---TPNARPHAITAGKNS 241 (300)
T ss_dssp CEEEEEECTTSS-----EEEEETTT-----TEEEEECT-TCC--EEE-EECS---STTCCEEEEEECSTT
T ss_pred CcceEEECCCCC-----EEEEccCC-----CEEEEEcC-CCc--EEE-EECC---CCCCCceEEEECCCC
Confidence 223788998875 44444444 78999987 222 111 1111 233468899999885
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=4.1e-06 Score=66.10 Aligned_cols=69 Identities=12% Similarity=0.014 Sum_probs=52.0
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCCCCcEEEEeEeeec-------CccEEEEEEcCCCCCCEEEEE
Q 026295 14 SSSWNYCGQRLATGS----------TDGTLSIFDSPDPSSSSFTCNLKTKVH-------AGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~ 76 (240)
.++|+|+|++|..+. .++.|.+||.. +.+.+..+..- ......+.|+|+ |++|+.+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~-----t~~~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~ 142 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV-----TFLPIADIELPDAPRFDVGPYSWMNANTPN--NADLLFF 142 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC-----CCcEEEEEECCCccccccCCCccceEECCC--CCEEEEE
Confidence 899999999998886 36789999997 44555544321 123458899999 9999887
Q ss_pred ec--CCeEEEEEeeec
Q 026295 77 CS--DGSLLLWEEIVE 90 (240)
Q Consensus 77 ~~--d~~v~iwd~~~~ 90 (240)
.. +..|.++| ..+
T Consensus 143 n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGG 157 (373)
T ss_pred ecCCCCeEEEEE-CCC
Confidence 74 47899999 765
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.81 E-value=1.4e-07 Score=80.48 Aligned_cols=118 Identities=12% Similarity=0.043 Sum_probs=76.2
Q ss_pred cccceEEEEECCCCCEEEE-----EeCCCcEEEEeCCCCCCCcEEEEe-EeeecCccEEEEEEcCCCCCCEEEEEecCC-
Q 026295 8 LDKGTTSSSWNYCGQRLAT-----GSTDGTLSIFDSPDPSSSSFTCNL-KTKVHAGAILKVVWVPPEFGDAVACICSDG- 80 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~- 80 (240)
|...+..++|||||++||- |+....|++||+.. ++.+. .+.. .....++|+ + ++.|+.+..+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-----g~~~~~~~~~--~k~~~~~Ws-D--g~~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES-----KQPLETPLKD--VKFSGISWL-G--NEGFFYSSYDKP 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT-----CSEEEEEEEE--EESCCCEEE-T--TTEEEEEESSCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC-----CCCCccccCC--ceeccEEEe-C--CCEEEEEEecCc
Confidence 4446888999999999884 33345799999983 33222 2221 113578899 8 88888877764
Q ss_pred ------------eEEEEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEEEeC----CCcEEEEEecC
Q 026295 81 ------------SLLLWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVAAYS----DGHVKVYELLD 140 (240)
Q Consensus 81 ------------~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~----dg~v~iw~~~~ 140 (240)
.|.+|++.+... .-..+..... +...+..+.|+| +|++|+.... ++.|.++|+.+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~---~~~~v~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQE---DDRLVFGAIPAQHHRYVGATVTE--DDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp C-------CCCCEEEEEETTSCGG---GCEEEESCSGGGCCSEEEEEECT--TSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ccccccccCCCcEEEEEECCCCcc---cceEEEecCCCCCeEEEEEEEcC--CCCEEEEEEccCCCCcEEEEEECCC
Confidence 388888754311 0023333333 445577899999 9997755442 24788898875
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.80 E-value=9.4e-07 Score=67.65 Aligned_cols=163 Identities=6% Similarity=-0.008 Sum_probs=97.7
Q ss_pred ccccceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEE
Q 026295 7 TLDKGTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLW 85 (240)
Q Consensus 7 ~h~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iw 85 (240)
..........|+++|+ ++++...++.|..|+... . ...+..+...+..+.+.++ |+++++...++.|.+|
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~---~~~~~~~~~~~~gl~~d~d--G~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----T---VDVLLDATAFTNGNAVDAQ--QRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----C---EEEEEESCSCEEEEEECTT--SCEEEEETTTTEEEEE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----C---EEEEeCCCCccceeeECCC--CCEEEEECCCCEEEEE
Confidence 3444567899999998 667777788999998742 2 2334445677899999998 9877666556789999
Q ss_pred EeeeccCCCcccEEEEE-eee-ccccEEeEEEeecCCCcEEEE----EeC-------------CCcEEEEEecCcccccc
Q 026295 86 EEIVEDAQPLQWKLCKS-FES-TSTQVLDVQFGVSSTSLKLVA----AYS-------------DGHVKVYELLDPLILKN 146 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~l~~----~~~-------------dg~v~iw~~~~~~~~~~ 146 (240)
+.. +. ...+.. ... ....+..++++| +|.++++ +.. .+.|..+|..+
T Consensus 113 ~~~-g~-----~~~~~~~~~~~~~~~~~~i~~d~--dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~------ 178 (305)
T 3dr2_A 113 DAD-GQ-----AHLLVGRYAGKRLNSPNDLIVAR--DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG------ 178 (305)
T ss_dssp CTT-SC-----EEEEECEETTEECSCCCCEEECT--TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS------
T ss_pred CCC-CC-----EEEEEeccCCCccCCCCCEEECC--CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC------
Confidence 874 21 111111 111 113466799988 8987765 332 23455555533
Q ss_pred eeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCC-CCCCeEEEEEeecC
Q 026295 147 WQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDT-PQLNSSKVWEFDEA 209 (240)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~-~~~~~i~iw~~~~~ 209 (240)
.+.... . ... ..+.++|+|++. .|.++..... ...+.|++|++...
T Consensus 179 g~~~~~-~-~~~----------~p~gl~~spdg~-----~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 179 SPLQRM-A-DLD----------HPNGLAFSPDEQ-----TLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp CCCEEE-E-EES----------SEEEEEECTTSS-----EEEEEECCC---CCCEEEEEEEETT
T ss_pred CcEEEE-e-cCC----------CCcceEEcCCCC-----EEEEEecCCcCCCCCEEEEEEecCC
Confidence 111111 1 111 113789999986 5666654200 00057999998754
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=9.7e-07 Score=68.79 Aligned_cols=189 Identities=7% Similarity=-0.019 Sum_probs=109.9
Q ss_pred cccceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCCCcEEEEeEeee------cCccEEEEEEcCCCCCCEEEEE
Q 026295 8 LDKGTTSSSWNYCGQRLATGST-----DGTLSIFDSPDPSSSSFTCNLKTKV------HAGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~l~s~ 76 (240)
|-..+..++|+++|+++++-.. +..|.+||+. +.+.+..+.. +...+..+++.++ .+..+++-
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-----tg~~~~~~~~~~~~~~~~~~~~~v~vd~~-~g~~yvtd 138 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-----NNQLSRVIYLPPPITLSNSFVNDLAVDLI-HNFVYISD 138 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-----TTEEEEEEECCTTTSCTTCCCCEEEEETT-TTEEEEEE
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-----CCeEEEEEECChhhcccccccceEEEecC-CCEEEEEc
Confidence 4457899999999987665443 5789999987 4454544432 2234689999875 13444454
Q ss_pred e---cCCeEEEEEeeeccCCCcccEEEEEeee-----------------------------ccccEEeEEEeecCCCcEE
Q 026295 77 C---SDGSLLLWEEIVEDAQPLQWKLCKSFES-----------------------------TSTQVLDVQFGVSSTSLKL 124 (240)
Q Consensus 77 ~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~~~l 124 (240)
. .++.|.+||+..+ +..+.+.. ....+..|+|+| ++..|
T Consensus 139 ~~~~~~~~i~v~d~~~g-------~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~--dg~~l 209 (343)
T 2qe8_A 139 PAPDDKAALIRVDLQTG-------LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA--ENEWL 209 (343)
T ss_dssp CCSGGGCEEEEEETTTC-------CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT--TSCEE
T ss_pred CccCCCCeEEEEECCCC-------CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc--CCCEE
Confidence 4 5789999998644 22221111 012367899999 99888
Q ss_pred EEEeCCCcEEEEEecCcc----cccceeEEeeee--cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCC
Q 026295 125 VAAYSDGHVKVYELLDPL----ILKNWQLQAEFQ--NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQL 198 (240)
Q Consensus 125 ~~~~~dg~v~iw~~~~~~----~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~ 198 (240)
..+..++. ++|.+.... .....+....+. .... ....+++++++. ++++...+
T Consensus 210 y~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g----------~pdgia~d~~G~-----l~va~~~~----- 268 (343)
T 2qe8_A 210 YLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKP----------ICDGISIDKDHN-----IYVGDLAH----- 268 (343)
T ss_dssp EEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECC----------SCSCEEECTTCC-----EEEEEGGG-----
T ss_pred EEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCC----------CCceEEECCCCC-----EEEEccCC-----
Confidence 88777664 555553210 000000000000 1111 112788999876 66666666
Q ss_pred CeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 199 NSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 199 ~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+.|.+|+..++. ...... . .+...+.+++|.|++
T Consensus 269 ~~V~~~d~~~G~--~~~~~~---~-~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 269 SAIGVITSADRA--YKLLVT---D-EKLSWTDSFNFGSDG 302 (343)
T ss_dssp TEEEEEETTTTE--EEEEEE---C-GGGSCEEEEEECTTS
T ss_pred CeEEEEECCCCC--EEEEEE---C-CceecCCeeEECCCC
Confidence 899999973332 111111 1 123468999999875
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.75 E-value=6.1e-07 Score=70.67 Aligned_cols=117 Identities=9% Similarity=-0.074 Sum_probs=88.5
Q ss_pred EEEECCCCCEEEEEeC-----CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe----------c
Q 026295 14 SSSWNYCGQRLATGST-----DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC----------S 78 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~----------~ 78 (240)
.....|+++++..... ++.|.++|.. +.+.+..+..-..+ . +.++|+ |+.++.+. .
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~-----t~~v~~~I~vG~~P-~-va~spD--G~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGE-----AGRVIGMIDGGFLP-N-PVVADD--GSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETT-----TTEEEEEEEECSSC-E-EEECTT--SSCEEEEEEEEEETTEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECC-----CCeEEEEEECCCCC-c-EEECCC--CCEEEEEcccccccccCCC
Confidence 3456789988888765 6799999998 66788888754454 4 999999 98777665 3
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeecc-------ccEEeEEEeecCCCcEEEEEeC--CCcEEEEEecCcccccceeE
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFESTS-------TQVLDVQFGVSSTSLKLVAAYS--DGHVKVYELLDPLILKNWQL 149 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw~~~~~~~~~~~~~ 149 (240)
++.|.+||..+. +.+..+.-.. .....+.|+| +|+++.+++. ++.|.++|+.+ .+.
T Consensus 108 ~~~VsviD~~t~-------~v~~~I~v~~g~r~~~g~~P~~~a~sp--DGk~lyVan~~~~~~VsVID~~t------~~v 172 (386)
T 3sjl_D 108 TDYVEVFDPVTL-------LPTADIELPDAPRFLVGTYPWMTSLTP--DGKTLLFYQFSPAPAVGVVDLEG------KAF 172 (386)
T ss_dssp EEEEEEECTTTC-------CEEEEEEETTCCCCCBSCCGGGEEECT--TSSEEEEEECSSSCEEEEEETTT------TEE
T ss_pred CCEEEEEECCCC-------eEEEEEECCCccccccCCCCceEEEcC--CCCEEEEEEcCCCCeEEEEECCC------CcE
Confidence 578999999776 6666665321 2456789999 9998888874 68999999988 566
Q ss_pred Eeeee
Q 026295 150 QAEFQ 154 (240)
Q Consensus 150 ~~~~~ 154 (240)
+.++.
T Consensus 173 v~tI~ 177 (386)
T 3sjl_D 173 KRMLD 177 (386)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.72 E-value=1.1e-05 Score=62.45 Aligned_cols=180 Identities=9% Similarity=0.010 Sum_probs=101.0
Q ss_pred eEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeec
Q 026295 12 TTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 12 v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
..+.+|+|++ .++++...++.|..|+.... +. ..+. ....+.++.|+++ |.++++. . ..|.+||...+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~-----~~-~~~~-~~~~v~~i~~~~d--g~l~v~~-~-~gl~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG-----RK-TVHA-LPFMGSALAKISD--SKQLIAS-D-DGLFLRDTATG 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT-----EE-EEEE-CSSCEEEEEEEET--TEEEEEE-T-TEEEEEETTTC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC-----cE-EEEE-CCCcceEEEEeCC--CeEEEEE-C-CCEEEEECCCC
Confidence 4678999975 45666667789999998732 22 2222 3467999999998 8877654 3 45888887554
Q ss_pred cCCCcccEEEEEeee--ccccEEeEEEeecCCCcEEEEEeCC----CcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 91 DAQPLQWKLCKSFES--TSTQVLDVQFGVSSTSLKLVAAYSD----GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 91 ~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
. +..+..... ....+..+.++| +|.++++...+ +...||.+.+ .+... +.....
T Consensus 120 ~-----~~~~~~~~~~~~~~~~~~i~~d~--~G~l~v~~~~~~~~~~~~~l~~~~~------g~~~~-~~~~~~------ 179 (326)
T 2ghs_A 120 V-----LTLHAELESDLPGNRSNDGRMHP--SGALWIGTMGRKAETGAGSIYHVAK------GKVTK-LFADIS------ 179 (326)
T ss_dssp C-----EEEEECSSTTCTTEEEEEEEECT--TSCEEEEEEETTCCTTCEEEEEEET------TEEEE-EEEEES------
T ss_pred c-----EEEEeeCCCCCCCCCCCCEEECC--CCCEEEEeCCCcCCCCceEEEEEeC------CcEEE-eeCCCc------
Confidence 1 122221111 124678899988 88865544321 2334444432 12211 111111
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEee--cC-CCC-cceeEeeecCCCCCCceEEEEEecCC
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFD--EA-HNR-WLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~--~~-~~~-~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
..+.++|+|++. .|..+...+ +.|.+|++. ++ ... ......+. ........+++++++
T Consensus 180 ----~~~~i~~s~dg~-----~lyv~~~~~----~~I~~~d~~~~~Gl~~~~~~~~~~~~---~~~~~p~gi~~d~~G 241 (326)
T 2ghs_A 180 ----IPNSICFSPDGT-----TGYFVDTKV----NRLMRVPLDARTGLPTGKAEVFIDST---GIKGGMDGSVCDAEG 241 (326)
T ss_dssp ----SEEEEEECTTSC-----EEEEEETTT----CEEEEEEBCTTTCCBSSCCEEEEECT---TSSSEEEEEEECTTS
T ss_pred ----ccCCeEEcCCCC-----EEEEEECCC----CEEEEEEcccccCCcccCceEEEECC---CCCCCCCeeEECCCC
Confidence 123789999986 555554322 899999986 33 211 01111121 122356677777765
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.71 E-value=2.6e-06 Score=67.18 Aligned_cols=106 Identities=9% Similarity=-0.092 Sum_probs=76.3
Q ss_pred EECCCCCEEEEEeC--CC---cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe----------cCC
Q 026295 16 SWNYCGQRLATGST--DG---TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC----------SDG 80 (240)
Q Consensus 16 ~~s~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~----------~d~ 80 (240)
...|+++++.+... .. .|.++|.. +++.+..+..-..+ .+.++|+ |+.++.+. .++
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~-----t~~~~~~i~~g~~p--~i~~spD--g~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAG-----SGSILGHVNGGFLP--NPVAAHS--GSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECC-----CCeEEEEecCCCCC--CeEECCC--CCEEEEEeccccccccCCCCC
Confidence 34578887777653 23 78999998 56677777643333 9999999 99888875 367
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeec-------cccEEeEEEeecCCCcEEEEEeC--CCcEEEEEecC
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFEST-------STQVLDVQFGVSSTSLKLVAAYS--DGHVKVYELLD 140 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw~~~~ 140 (240)
.|.++|..+. +.+..+... ......+.|+| +|++|++++. ++.|.++| .+
T Consensus 98 ~v~viD~~t~-------~~~~~i~~~~~~~~~~g~~p~~~~~sp--DG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 98 YVEVFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTP--NNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred eEEEEECCCC-------cEEEEEECCCccccccCCCccceEECC--CCCEEEEEecCCCCeEEEEE-CC
Confidence 8999998765 555554321 12345789999 9999988874 47899999 76
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.70 E-value=1.8e-09 Score=85.30 Aligned_cols=147 Identities=18% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEE
Q 026295 20 CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKL 99 (240)
Q Consensus 20 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 99 (240)
++.++++++.|+.|+.||.. +++.+..+.. +.+.+..+..+ +..+++++.|+.|..||..++ +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~-----tG~~~W~~~~--~~~~s~p~~~~--g~~~v~~s~dg~l~a~d~~tG-------~~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR-----TGSIKWTLKE--DPVLQVPTHVE--EPAFLPDPNDGSLYTLGSKNN-------EG 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT-----TCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC------------CC
T ss_pred eCCEEEEEcCCCEEEEEECC-----CCCEEEEecC--CCceecceEcC--CCEEEEeCCCCEEEEEECCCC-------ce
Confidence 57899999999999999998 5566666654 44544445455 667777789999999999765 22
Q ss_pred EEEeeecc-ccEEeEEEeecC-CCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeC
Q 026295 100 CKSFESTS-TQVLDVQFGVSS-TSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNP 177 (240)
Q Consensus 100 ~~~~~~~~-~~v~~~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p 177 (240)
+..+..+. ..+. -+|.. .+..+++++.|+.|..||..+ ++....+..+. ...++|
T Consensus 72 ~w~~~~~~~~~~~---~sp~~~~~~~v~~g~~dg~v~a~D~~t------G~~~w~~~~~~--------------~~~~~p 128 (369)
T 2hz6_A 72 LTKLPFTIPELVQ---ASPCRSSDGILYMGKKQDIWYVIDLLT------GEKQQTLSSAF--------------ADSLSP 128 (369)
T ss_dssp SEECSCCHHHHHT---TCSCC-----CCCCEEEEEEEEECCC--------------------------------------
T ss_pred eeeeeccCccccc---cCceEecCCEEEEEeCCCEEEEEECCC------CcEEEEecCCC--------------cccccc
Confidence 22222211 1111 01111 234577888899999999987 34443333221 123455
Q ss_pred CCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 178 QKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 178 ~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
.+. .+++++.+ +.|+.||..+++..|..
T Consensus 129 ~~~-----~v~~~~~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 129 STS-----LLYLGRTE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp ---------EEEEEEE-----EEEECCCSSSSSCCCEE
T ss_pred cCC-----EEEEEecC-----CEEEEEECCCCCEEEeE
Confidence 444 78888888 99999999998887765
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.68 E-value=2.1e-06 Score=67.58 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=78.4
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCCCCcEEEEeEeeecC-------ccEEEEEEcCCCCCCEEEEE
Q 026295 14 SSSWNYCGQRLATGS----------TDGTLSIFDSPDPSSSSFTCNLKTKVHA-------GAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~l~s~ 76 (240)
.++++|+|++|.++. .++.|.+||.. +.+.+..+..-. .....+.++|+ |++++.+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~-----t~~v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVa 154 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV-----TLLPTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFY 154 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----TCCEEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----CCeEEEEEECCCccccccCCCCceEEEcCC--CCEEEEE
Confidence 499999999887775 35789999998 556666664311 23557899999 9988887
Q ss_pred ec--CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 77 CS--DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 77 ~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
.. ++.|.++|+.+. +.+.++.... + ...+ |. ....+++.+.||++.+.++..
T Consensus 155 n~~~~~~VsVID~~t~-------~vv~tI~v~g--~-~~~~-P~-g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 155 QFSPAPAVGVVDLEGK-------AFKRMLDVPD--C-YHIF-PT-APDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp ECSSSCEEEEEETTTT-------EEEEEEECCS--E-EEEE-EE-ETTEEEEEETTSCEEEEECCS
T ss_pred EcCCCCeEEEEECCCC-------cEEEEEECCC--c-ceee-cC-CCceeEEECCCCCEEEEECCC
Confidence 64 689999999876 7777775432 1 1223 42 345577888899999998865
No 220
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=1.4e-05 Score=59.24 Aligned_cols=187 Identities=11% Similarity=0.084 Sum_probs=111.2
Q ss_pred ccccc--eEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCe
Q 026295 7 TLDKG--TTSSSWNYCGQRLATGSTDG--TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGS 81 (240)
Q Consensus 7 ~h~~~--v~~~~~s~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~ 81 (240)
.|+.. ...+.|+ ++.++.+.+.+| .|+++|+. +++.+..+... .........+. ++.|. ..-.++.
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-----Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~ 108 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-----SGKTLQQIELG-KRYFGEGISDW--KDKIVGLTWKNGL 108 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTT-----TCCEEEEEECC-TTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECC-----CCcEEEEEecC-CccceeEEEEe--CCEEEEEEeeCCE
Confidence 45543 4788898 677777777766 89999998 56666666532 23333222223 44444 4445889
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc--ce
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI--DS 159 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~--~~ 159 (240)
+.++|..+. +.+.++...... ..+ ++ ++..|+....++.|.++|..+ .+....+.... .+
T Consensus 109 v~v~D~~t~-------~~~~ti~~~~eG-~gl--t~--dg~~L~~SdGs~~i~~iDp~T------~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 109 GFVWNIRNL-------RQVRSFNYDGEG-WGL--TH--NDQYLIMSDGTPVLRFLDPES------LTPVRTITVTAHGEE 170 (262)
T ss_dssp EEEEETTTC-------CEEEEEECSSCC-CCE--EE--CSSCEEECCSSSEEEEECTTT------CSEEEEEECEETTEE
T ss_pred EEEEECccC-------cEEEEEECCCCc-eEE--ec--CCCEEEEECCCCeEEEEcCCC------CeEEEEEEeccCCcc
Confidence 999999776 777777753322 233 45 676666666678899999887 45555554321 11
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC-------CCCCCceEEE
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP-------EDRSDEVYAV 232 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~-------~~h~~~v~~v 232 (240)
+. ..|.+.|. ++. +++....+ +.|.+.|..+++..... .+... ..-.+-.+.|
T Consensus 171 ~~-------~lNELe~~-~G~-----lyan~w~~-----~~I~vIDp~tG~V~~~I--d~~~L~~~~~~~~~~~~vlNGI 230 (262)
T 3nol_A 171 LP-------ELNELEWV-DGE-----IFANVWQT-----NKIVRIDPETGKVTGII--DLNGILAEAGPLPSPIDVLNGI 230 (262)
T ss_dssp CC-------CEEEEEEE-TTE-----EEEEETTS-----SEEEEECTTTCBEEEEE--ECTTGGGGSCSCCSSCCCEEEE
T ss_pred cc-------ccceeEEE-CCE-----EEEEEccC-----CeEEEEECCCCcEEEEE--ECCcCccccccccCcCCceEEE
Confidence 11 12356776 442 55555455 88998888776532211 11100 0112346889
Q ss_pred EEecCCCC
Q 026295 233 AWALNIGR 240 (240)
Q Consensus 233 ~~sp~~~~ 240 (240)
||+|+..|
T Consensus 231 A~dp~~~~ 238 (262)
T 3nol_A 231 AWDKEHHR 238 (262)
T ss_dssp EEETTTTE
T ss_pred EEcCCCCE
Confidence 99998754
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.59 E-value=1.5e-05 Score=59.48 Aligned_cols=189 Identities=7% Similarity=-0.020 Sum_probs=112.8
Q ss_pred cccc--ceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCCCCcEEEEeEeeecCc-cEEEEEEcCCCCCCEEEEEecCCe
Q 026295 7 TLDK--GTTSSSWNYCGQRLATGST--DGTLSIFDSPDPSSSSFTCNLKTKVHAG-AILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 7 ~h~~--~v~~~~~s~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
.|+. ....++|++++.+.++.+. ++.|+++|+. +++.+..+..-.. ....+.+.. +.+.++.-.++.
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-----tg~v~~~i~l~~~~fgeGi~~~g---~~lyv~t~~~~~ 87 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQ-----TGKVENIHKMDDSYFGEGLTLLN---EKLYQVVWLKNI 87 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETT-----TCCEEEEEECCTTCCEEEEEEET---TEEEEEETTCSE
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECC-----CCCEEEEEecCCCcceEEEEEeC---CEEEEEEecCCE
Confidence 3554 3578999998755555443 5799999998 5566666542111 223455532 344445556789
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc--ce
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI--DS 159 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~--~~ 159 (240)
+.++|..+. +.+.++... .. ....+++ ++..++++..+++|.++|..+ .+....+.... .+
T Consensus 88 v~viD~~t~-------~v~~~i~~g-~~-~g~glt~--Dg~~l~vs~gs~~l~viD~~t------~~v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 88 GFIYDRRTL-------SNIKNFTHQ-MK-DGWGLAT--DGKILYGSDGTSILYEIDPHT------FKLIKKHNVKYNGHR 150 (266)
T ss_dssp EEEEETTTT-------EEEEEEECC-SS-SCCEEEE--CSSSEEEECSSSEEEEECTTT------CCEEEEEECEETTEE
T ss_pred EEEEECCCC-------cEEEEEECC-CC-CeEEEEE--CCCEEEEECCCCeEEEEECCC------CcEEEEEEECCCCcc
Confidence 999998765 777777633 11 1244566 777677777788999999877 45555554321 11
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC------CCC--CCceEE
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP------EDR--SDEVYA 231 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~------~~h--~~~v~~ 231 (240)
+ ...+.+.|. ++. +++....+ +.|.+-|..+++..... .+.+. ..+ ..-.+.
T Consensus 151 ~-------~~~nele~~-dg~-----lyvn~~~~-----~~V~vID~~tg~V~~~I--~~~g~~~~~~~~~~~~~~v~nG 210 (266)
T 2iwa_A 151 V-------IRLNELEYI-NGE-----VWANIWQT-----DCIARISAKDGTLLGWI--LLPNLRKKLIDEGFRDIDVLNG 210 (266)
T ss_dssp C-------CCEEEEEEE-TTE-----EEEEETTS-----SEEEEEETTTCCEEEEE--ECHHHHHHHHHTTCTTCCCEEE
T ss_pred c-------ccceeEEEE-CCE-----EEEecCCC-----CeEEEEECCCCcEEEEE--ECCCcccccccccccccCceEE
Confidence 1 112367777 442 45555455 89999998776532211 11110 001 124689
Q ss_pred EEEecCCCC
Q 026295 232 VAWALNIGR 240 (240)
Q Consensus 232 v~~sp~~~~ 240 (240)
|+|+|++.|
T Consensus 211 Ia~~~~~~~ 219 (266)
T 2iwa_A 211 IAWDQENKR 219 (266)
T ss_dssp EEEETTTTE
T ss_pred EEEcCCCCE
Confidence 999999754
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=6.9e-06 Score=63.95 Aligned_cols=119 Identities=8% Similarity=0.059 Sum_probs=76.3
Q ss_pred cccceEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCCCcEEEEe----EeeecCccEEEEEEcCCCCCCEEEEEec---
Q 026295 8 LDKGTTSSSWNYCGQRLATGS--TDGTLSIFDSPDPSSSSFTCNL----KTKVHAGAILKVVWVPPEFGDAVACICS--- 78 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~--- 78 (240)
.......++++++|+.+++.. .++.++||.+. .+ ...... ....+-..+..+++.++ +.++++-..
T Consensus 15 ~~~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g--~~~~~p~~~~~~~~~~~~p~gv~~d~~--g~L~v~D~g~~~ 89 (343)
T 2qe8_A 15 LSLAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QD--GLIPFPPQSGNAIITFDTVLGIKSDGN--GIVWMLDNGNQS 89 (343)
T ss_dssp ESSCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TT--EEEESCCCCSSCCCCCSCEEEEEECSS--SEEEEEECHHHH
T ss_pred cCCCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CC--CeecCCCcccCcccceeEeeEEEEcCC--CcEEEEcCCCCc
Confidence 335788999999999988864 23435566654 11 211110 11234567999999998 876665433
Q ss_pred --CCeEEEEEeeeccCCCcccEEEEEeeec------cccEEeEEEeecCCC-cEEEEEe---CCCcEEEEEecC
Q 026295 79 --DGSLLLWEEIVEDAQPLQWKLCKSFEST------STQVLDVQFGVSSTS-LKLVAAY---SDGHVKVYELLD 140 (240)
Q Consensus 79 --d~~v~iwd~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-~~l~~~~---~dg~v~iw~~~~ 140 (240)
+..|.+||+.++ +.+..+... ...+..++++| ++ ..+++-. .++.|.+||+.+
T Consensus 90 ~~~~~i~~~d~~tg-------~~~~~~~~~~~~~~~~~~~~~v~vd~--~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 90 KSVPKLVAWDTLNN-------QLSRVIYLPPPITLSNSFVNDLAVDL--IHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp TSCCEEEEEETTTT-------EEEEEEECCTTTSCTTCCCCEEEEET--TTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CCCCeEEEEECCCC-------eEEEEEECChhhcccccccceEEEec--CCCEEEEEcCccCCCCeEEEEECCC
Confidence 578999998765 555555421 23467899987 54 4445544 578899999875
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.52 E-value=8.7e-06 Score=65.04 Aligned_cols=166 Identities=9% Similarity=0.039 Sum_probs=96.7
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeE--eeecCccE--EEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 9 DKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLK--TKVHAGAI--LKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~h~~~v--~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
...+.+++++|++..|..+..++.|+.|+.... ....+.. ..++...- ..++|+|. .+.++++-..++.|+.
T Consensus 218 ~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~---~~~~~~~~~~~g~~~~~P~~~ia~~p~-~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ---EVTLIKQLELSGSLGTNPGPYLIYYFV-DSNFYMSDQNLSSVYK 293 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECTTCEEEEEETTTC---CEEEEEECCCCSCCCCSSCCEEEEETT-TTEEEEEETTTTEEEE
T ss_pred cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC---CEEEEecccccCCCCCCccccEEEeCC-CCEEEEEeCCCCEEEE
Confidence 356778999995555555777889999998743 2222211 11222222 38999995 1556666666788999
Q ss_pred EEeeeccCCCcccEEEEEeeec---------------cccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCccccccee
Q 026295 85 WEEIVEDAQPLQWKLCKSFEST---------------STQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILKNWQ 148 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~ 148 (240)
|+.... +..+.+. -.....++++| +|.++++-+ .++.|+.|++.+ +.
T Consensus 294 ~~~~g~---------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~--dG~lyvad~~~~~~I~~~~~~~------G~ 356 (409)
T 3hrp_A 294 ITPDGE---------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE--DGNFYIVDGFKGYCLRKLDILD------GY 356 (409)
T ss_dssp ECTTCC---------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT--TCCEEEEETTTTCEEEEEETTT------TE
T ss_pred EecCCC---------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC--CCCEEEEeCCCCCEEEEEECCC------CE
Confidence 886532 1122211 13468899998 888777777 789999999654 22
Q ss_pred EEeeeecccc-e--e--eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEe
Q 026295 149 LQAEFQNAID-S--V--TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEF 206 (240)
Q Consensus 149 ~~~~~~~~~~-~--v--~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~ 206 (240)
. ..+..... . . .+..........++++|++. ++++-... +.|+.+++
T Consensus 357 v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-----lyVad~~n-----~~Ir~i~~ 408 (409)
T 3hrp_A 357 V-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-----YWIAEAWG-----KAIRKYAV 408 (409)
T ss_dssp E-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-----EEEEESTT-----CEEEEEEE
T ss_pred E-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-----EEEEECCC-----CeEEEEEe
Confidence 2 22222100 0 0 00001122345899999864 44444444 78887765
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.50 E-value=3e-05 Score=61.90 Aligned_cols=182 Identities=12% Similarity=0.150 Sum_probs=110.6
Q ss_pred CCCCEEEE-EeCCCcEEEEeCCCCCCCcEEEEeEee------ec-CccEEEEEEcCCCCCCEEEEEecC------CeEEE
Q 026295 19 YCGQRLAT-GSTDGTLSIFDSPDPSSSSFTCNLKTK------VH-AGAILKVVWVPPEFGDAVACICSD------GSLLL 84 (240)
Q Consensus 19 ~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~------~h-~~~v~~~~~~~~~~~~~l~s~~~d------~~v~i 84 (240)
+++++|+. +..++.|.|+|+..... ..+...++. .. ...-..+...|+ | +++++..+ +.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~-~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPR-EPKIIKVIEPEEVKKVSGYSRLHTVHCGPD--A-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTT-SCEEEEEECHHHHHHHHCEEEEEEEEECSS--C-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCC-CceeeeeechhhcccccCCCcccceeECCC--e-EEEEcCCCcCCCCCCeEEE
Confidence 77776655 55678999999852211 235555552 11 123456777898 8 66666555 68999
Q ss_pred EEeeeccCCCcccEEEEEeeeccc---cEEeEEEeecCCCcEEEEEe-------------------CCCcEEEEEecCcc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTST---QVLDVQFGVSSTSLKLVAAY-------------------SDGHVKVYELLDPL 142 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~-------------------~dg~v~iw~~~~~~ 142 (240)
.|..+. +.+..+..... .-..+-|+| +++.+++.. ...+|.+||+.+
T Consensus 169 lD~~T~-------~v~~~~~~~~~~~~~~Yd~~~~p--~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-- 237 (462)
T 2ece_A 169 LDHYSF-------EPLGKWEIDRGDQYLAYDFWWNL--PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-- 237 (462)
T ss_dssp ECTTTC-------CEEEECCSBCTTCCCCCCEEEET--TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT--
T ss_pred EECCCC-------eEEEEEccCCCCccccceEEECC--CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC--
Confidence 998765 67777753211 233577888 888777764 368999999986
Q ss_pred cccceeEEeeeecc-cceeeccccccceeeeEEE--eCCCCCCCCceEEEEec-----CCCCCCCeEEEEEeecCCCCcc
Q 026295 143 ILKNWQLQAEFQNA-IDSVTMFRKASCISASISW--NPQKGENQGSSFVLGFN-----SDTPQLNSSKVWEFDEAHNRWL 214 (240)
Q Consensus 143 ~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~--~p~~~~~~~~~l~~~~~-----dd~~~~~~i~iw~~~~~~~~~~ 214 (240)
.+..+++... ..... ..+.| +|++. ++.++.. .+ +.|.+|..+.+ .|.
T Consensus 238 ----~k~~~tI~vg~~g~~P---------~~i~f~~~Pdg~-----~aYV~~e~~~~~Ls----s~V~v~~~d~g--~~~ 293 (462)
T 2ece_A 238 ----RKRIHSLTLGEENRMA---------LELRPLHDPTKL-----MGFINMVVSLKDLS----SSIWLWFYEDG--KWN 293 (462)
T ss_dssp ----TEEEEEEESCTTEEEE---------EEEEECSSTTCC-----EEEEEEEEETTTCC----EEEEEEEEETT--EEE
T ss_pred ----CcEeeEEecCCCCCcc---------ceeEeeECCCCC-----EEEEEEeeeccCCC----ceEEEEEecCC--cee
Confidence 4556555542 11111 14544 99887 5666665 43 79999888753 343
Q ss_pred eeEeeecCC----C-----------CCCceEEEEEecCCC
Q 026295 215 PVAELALPE----D-----------RSDEVYAVAWALNIG 239 (240)
Q Consensus 215 ~~~~~~~~~----~-----------h~~~v~~v~~sp~~~ 239 (240)
....+.... + -.....+|.+|||+-
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 333221110 0 013578899999973
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=8.7e-06 Score=65.12 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=97.4
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCCCCcEEEEeEeeec-------CccEEEEEEcCCCCCCEEEEE
Q 026295 14 SSSWNYCGQRLATGS----------TDGTLSIFDSPDPSSSSFTCNLKTKVH-------AGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~ 76 (240)
.++++|+|++|.++. .++.|.++|.. +.+.+..+..- ......+.++|+ |++++.+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-----t~~vv~~I~v~g~~r~~~g~~P~~~~~spD--Gk~lyV~ 194 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-----TFLPIADIELPDAPRFLVGTYQWMNALTPD--NKNLLFY 194 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----TCCEEEEEEETTCCCCCBSCCGGGSEECTT--SSEEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-----CCcEEEEEECCCccccccCCCcceEEEcCC--CCEEEEE
Confidence 799999999888876 36789999998 55666655421 123557899999 9988887
Q ss_pred ec--CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEe---
Q 026295 77 CS--DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQA--- 151 (240)
Q Consensus 77 ~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--- 151 (240)
.. ++.|.+.|+... +.+..+.-... ....|. ....+++.+.||++.+.++.+. +...
T Consensus 195 n~~~~~~VsVID~~t~-------kvv~~I~v~g~----~~~~p~-g~~~~v~~~~dG~~~~V~~~~~------~v~~~~~ 256 (426)
T 3c75_H 195 QFSPAPAVGVVDLEGK-------TFDRMLDVPDC----YHIFPA-SPTVFYMNCRDGSLARVDFADG------ETKVTNT 256 (426)
T ss_dssp ECSSSCEEEEEETTTT-------EEEEEEECCSE----EEEEEE-ETTEEEEEETTSSEEEEECCTT------CCEEEEC
T ss_pred ecCCCCeEEEEECCCC-------eEEEEEEcCCc----eeeccC-CCcEEEEEcCCCCEEEEECCCC------cEEEEee
Confidence 64 578999999776 77777764321 233442 1245667778898888888431 1111
Q ss_pred -eeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 152 -EFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 152 -~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
.+.....++. ..+.|.+++. .++..... +.|.+.|....
T Consensus 257 ~~~~v~~~p~~---------~~~~~~~dg~-----~~~~~s~~-----g~V~ViD~~~~ 296 (426)
T 3c75_H 257 EVFHTEDELLI---------NHPAFSLRSG-----RLVWPTYT-----GKIFQADLTAE 296 (426)
T ss_dssp CCCSCTTSCBC---------SCCEECTTTC-----EEEEEBTT-----SEEEEEEECSS
T ss_pred eeeccCCCcee---------eEeeecCCCC-----EEEEEeCC-----CcEEEEeccCC
Confidence 1111111110 1356777765 44444556 89999998653
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.45 E-value=8.9e-09 Score=81.25 Aligned_cols=159 Identities=8% Similarity=0.009 Sum_probs=74.9
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCC-CCCEEEEEecCCeEEEEEeeec
Q 026295 12 TTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPE-FGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
+.+..+..++..+++++.|+.|+.||.. +++.+..+..+..... .-+|.. .+..+++++.|+.|..||..++
T Consensus 40 ~~s~p~~~~g~~~v~~s~dg~l~a~d~~-----tG~~~w~~~~~~~~~~--~~sp~~~~~~~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 40 VLQVPTHVEEPAFLPDPNDGSLYTLGSK-----NNEGLTKLPFTIPELV--QASPCRSSDGILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp SCCCC-----CCEEECTTTCCEEEC----------CCSEECSCCHHHHH--TTCSCC-----CCCCEEEEEEEEECCC--
T ss_pred ceecceEcCCCEEEEeCCCCEEEEEECC-----CCceeeeeeccCcccc--ccCceEecCCEEEEEeCCCEEEEEECCCC
Confidence 3344445567788888899999999986 3333333332211100 001110 1456777788999999999876
Q ss_pred cCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccccccee
Q 026295 91 DAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCIS 170 (240)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (240)
+.+..+..+. ...++| .+..+++++.|+.|..||.++.... |. +.... ..
T Consensus 113 -------~~~w~~~~~~----~~~~~p--~~~~v~~~~~dg~v~a~d~~tG~~~--W~----~~~~~--~~--------- 162 (369)
T 2hz6_A 113 -------EKQQTLSSAF----ADSLSP--STSLLYLGRTEYTITMYDTKTRELR--WN----ATYFD--YA--------- 162 (369)
T ss_dssp ---------------------------------EEEEEEEEEEECCCSSSSSCC--CE----EEEEE--EC---------
T ss_pred -------cEEEEecCCC----cccccc--cCCEEEEEecCCEEEEEECCCCCEE--Ee----Eeccc--cc---------
Confidence 4444444332 234566 6777888999999999999874222 22 21110 01
Q ss_pred eeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 171 ASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 171 ~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
...+.++.. . ...+++++.+ +.|+.||..+++..|..
T Consensus 163 -~~~~~~~~~-~-~~~v~~~~~d-----g~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 163 -ASLPEDDVD-Y-KMSHFVSNGD-----GLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp -CBCCCCCTT-C-CCCEEEEETS-----CEEEEECTTTCCEEEEE
T ss_pred -CccccCCcc-c-cceEEEECCC-----CEEEEEECCCCcEEEEe
Confidence 222233210 0 0146677777 99999999888877754
No 227
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.43 E-value=2.9e-05 Score=57.56 Aligned_cols=189 Identities=12% Similarity=0.043 Sum_probs=111.8
Q ss_pred cccc--ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEE--EEEEcCCCCCCEEEEEecCCeE
Q 026295 7 TLDK--GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAIL--KVVWVPPEFGDAVACICSDGSL 82 (240)
Q Consensus 7 ~h~~--~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~l~s~~~d~~v 82 (240)
.|+. ....+.|+. +.+..+.+.+|.|+++|+. +++.+..+ - ..... .+.... +.+....-.++.+
T Consensus 50 phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~-----Tgkv~~~~-l-~~~~FgeGit~~g---~~Ly~ltw~~~~v 118 (268)
T 3nok_A 50 PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLE-----SAQPVWME-R-LGNIFAEGLASDG---ERLYQLTWTEGLL 118 (268)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSS-----CSSCSEEE-E-CTTCCEEEEEECS---SCEEEEESSSCEE
T ss_pred cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECC-----CCcEEeEE-C-CCCcceeEEEEeC---CEEEEEEccCCEE
Confidence 3543 346788873 6677778888899999998 34444443 2 12332 355532 3444455568899
Q ss_pred EEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 83 LLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
.++|..+. +.+.++...... +.++ + ++..|+.+..++.|.++|..+ .+....+.......
T Consensus 119 ~V~D~~Tl-------~~~~ti~~~~eG-wGLt--~--Dg~~L~vSdGs~~l~~iDp~T------~~v~~~I~V~~~g~-- 178 (268)
T 3nok_A 119 FTWSGMPP-------QRERTTRYSGEG-WGLC--Y--WNGKLVRSDGGTMLTFHEPDG------FALVGAVQVKLRGQ-- 178 (268)
T ss_dssp EEEETTTT-------EEEEEEECSSCC-CCEE--E--ETTEEEEECSSSEEEEECTTT------CCEEEEEECEETTE--
T ss_pred EEEECCcC-------cEEEEEeCCCce-eEEe--c--CCCEEEEECCCCEEEEEcCCC------CeEEEEEEeCCCCc--
Confidence 99999776 888888753222 3444 4 667677777788999999887 55555554322110
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEe-eec-----CCCCCCceEEEEEec
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAE-LAL-----PEDRSDEVYAVAWAL 236 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~-~~~-----~~~h~~~v~~v~~sp 236 (240)
..-..|.+.|. ++. +++....+ +.|.+-|..+++........ +.. ...-.+-.+.|||+|
T Consensus 179 ---~v~~lNeLe~~-dG~-----lyanvw~s-----~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 179 ---PVELINELECA-NGV-----IYANIWHS-----SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp ---ECCCEEEEEEE-TTE-----EEEEETTC-----SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred ---ccccccccEEe-CCE-----EEEEECCC-----CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 11122367776 432 55555455 88998888776532211110 100 011123568899999
Q ss_pred CCCC
Q 026295 237 NIGR 240 (240)
Q Consensus 237 ~~~~ 240 (240)
+..|
T Consensus 245 ~~~r 248 (268)
T 3nok_A 245 GSGR 248 (268)
T ss_dssp TTCC
T ss_pred CCCE
Confidence 8765
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.43 E-value=1.4e-05 Score=63.93 Aligned_cols=113 Identities=11% Similarity=-0.068 Sum_probs=83.1
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe----------cCCeEE
Q 026295 19 YCGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC----------SDGSLL 83 (240)
Q Consensus 19 ~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~----------~d~~v~ 83 (240)
++++++.+.... +.|.++|.. +.+.+..+..-..+ .+.++|+ ++.++.+. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~-----t~~vv~~I~vG~~P--gia~SpD--gk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS-----TGRILGMTDGGFLP--HPVAAED--GSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT-----TTEEEEEEEECSSC--EEEECTT--SSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC-----CCEEEEEEECCCCC--ceEECCC--CCEEEEEeccccccccCCCCCEEE
Confidence 466766666553 689999998 67888888754455 8999999 88777765 367899
Q ss_pred EEEeeeccCCCcccEEEEEeeec-------cccEEeEEEeecCCCcEEEEEeC--CCcEEEEEecCcccccceeEEeeee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFEST-------STQVLDVQFGVSSTSLKLVAAYS--DGHVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
++|..+. +.+..+.-. ......+.|+| +|++++++.. ++.|.+.|+.+ .+.+.++.
T Consensus 153 viD~~t~-------~vv~~I~v~g~~r~~~g~~P~~~~~sp--DGk~lyV~n~~~~~~VsVID~~t------~kvv~~I~ 217 (426)
T 3c75_H 153 VFDPVTF-------LPIADIELPDAPRFLVGTYQWMNALTP--DNKNLLFYQFSPAPAVGVVDLEG------KTFDRMLD 217 (426)
T ss_dssp EECTTTC-------CEEEEEEETTCCCCCBSCCGGGSEECT--TSSEEEEEECSSSCEEEEEETTT------TEEEEEEE
T ss_pred EEECCCC-------cEEEEEECCCccccccCCCcceEEEcC--CCCEEEEEecCCCCeEEEEECCC------CeEEEEEE
Confidence 9998776 666666532 12346789999 9999888874 57899999987 56655554
Q ss_pred c
Q 026295 155 N 155 (240)
Q Consensus 155 ~ 155 (240)
.
T Consensus 218 v 218 (426)
T 3c75_H 218 V 218 (426)
T ss_dssp C
T ss_pred c
Confidence 3
No 229
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.41 E-value=0.00018 Score=52.79 Aligned_cols=186 Identities=8% Similarity=0.017 Sum_probs=111.1
Q ss_pred cccc--ceEEEEECCCCCEEEEEeCC--CcEEEEeCCCCCCCcEEEEeEeeecCccEE--EEEEcCCCCCCEEEEEecCC
Q 026295 7 TLDK--GTTSSSWNYCGQRLATGSTD--GTLSIFDSPDPSSSSFTCNLKTKVHAGAIL--KVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 7 ~h~~--~v~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~l~s~~~d~ 80 (240)
+|+. ....+.|+. +.+..+.+.+ ..|+++|+. +++.+..+... .... .+.... +.+....-.++
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-----tgkv~~~~~l~-~~~fgeGi~~~~---~~ly~ltw~~~ 85 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-----TGRILQRAEVP-PPYFGAGIVAWR---DRLIQLTWRNH 85 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-----TCCEEEEEECC-TTCCEEEEEEET---TEEEEEESSSS
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECC-----CCCEEEEEeCC-CCcceeEEEEeC---CEEEEEEeeCC
Confidence 4654 466899987 5666666665 489999998 55666666532 2222 334322 34444555688
Q ss_pred eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc--c
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI--D 158 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~--~ 158 (240)
.+.++|..+. +.+.++...... +.+ .+ ++..|..+..+++|.++|..+ .+....+.... .
T Consensus 86 ~v~v~D~~tl-------~~~~ti~~~~~G-wgl--t~--dg~~L~vSdgs~~l~~iDp~t------~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 86 EGFVYDLATL-------TPRARFRYPGEG-WAL--TS--DDSHLYMSDGTAVIRKLDPDT------LQQVGSIKVTAGGR 147 (243)
T ss_dssp EEEEEETTTT-------EEEEEEECSSCC-CEE--EE--CSSCEEEECSSSEEEEECTTT------CCEEEEEECEETTE
T ss_pred EEEEEECCcC-------cEEEEEeCCCCc-eEE--ee--CCCEEEEECCCCeEEEEeCCC------CeEEEEEEEccCCc
Confidence 9999999776 888888754322 344 44 666666667788999999887 45555554322 1
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecC--------CCCCCceE
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALP--------EDRSDEVY 230 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~--------~~h~~~v~ 230 (240)
++. ..|.+.|. ++. +++....+ ..|.+-|..++...... .+.+. ..-.+-.+
T Consensus 148 ~~~-------~lNeLe~~-~G~-----lyanvw~s-----~~I~vIDp~tG~V~~~i--dl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 148 PLD-------NLNELEWV-NGE-----LLANVWLT-----SRIARIDPASGKVVAWI--DLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp ECC-------CEEEEEEE-TTE-----EEEEETTT-----TEEEEECTTTCBEEEEE--ECGGGSTTTTSCCCTTSSCEE
T ss_pred ccc-------cceeeEEe-CCE-----EEEEECCC-----CeEEEEECCCCCEEEEE--ECCcCccccccccCCcCCceE
Confidence 111 12356665 332 55555455 78888888776532111 11110 01123568
Q ss_pred EEEEecCCCC
Q 026295 231 AVAWALNIGR 240 (240)
Q Consensus 231 ~v~~sp~~~~ 240 (240)
.|||+|+..|
T Consensus 208 GIA~d~~~~~ 217 (243)
T 3mbr_X 208 GIAFDAEHDR 217 (243)
T ss_dssp EEEEETTTTE
T ss_pred EEEEcCCCCE
Confidence 8999998754
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.41 E-value=3.2e-05 Score=60.71 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=52.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEeCCCCCCCcEEEEeEeeec-------CccEEEEEEcCCCCCCEEEEE
Q 026295 14 SSSWNYCGQRLATGS----------TDGTLSIFDSPDPSSSSFTCNLKTKVH-------AGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~ 76 (240)
.+.++|+++++.++. .++.|.+||.. +++.+.++... ......+.++|+ |++++.+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-----T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVa 141 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-----TFLPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFF 141 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-----TCCEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----CCCEEEEEECCCccccccCCCcceEEEcCC--CCEEEEE
Confidence 699999999888886 36889999998 66777777643 123568999999 9888887
Q ss_pred ec--CCeEEE--EEee
Q 026295 77 CS--DGSLLL--WEEI 88 (240)
Q Consensus 77 ~~--d~~v~i--wd~~ 88 (240)
.. +..|.+ +|..
T Consensus 142 n~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 142 LFGSSAAAGLSVPGAS 157 (368)
T ss_dssp ECSSSCEEEEEETTTE
T ss_pred ccCCCCeEEEEEEchh
Confidence 64 356777 7764
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.26 E-value=6.5e-05 Score=64.10 Aligned_cols=70 Identities=9% Similarity=0.056 Sum_probs=47.7
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEeCCCCCCCcEEEEeEeee--cC-------ccEEEEEEc
Q 026295 14 SSSWNYCGQRLATGSTDGT-------------------LSIFDSPDPSSSSFTCNLKTKV--HA-------GAILKVVWV 65 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~~ 65 (240)
.++++|+..++..+..++. |..+|.. +++.+-.++. |. .++......
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~-----TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~ 313 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD-----TGEYVWHYQTTPGDAWDYTATQHMILAELP 313 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT-----TCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc-----CCceeEeeecCCcccccccCCCCcEEEeec
Confidence 5788998899999888764 8889988 5566665553 21 111111221
Q ss_pred CCCCCC---EEEEEecCCeEEEEEeeec
Q 026295 66 PPEFGD---AVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 66 ~~~~~~---~l~s~~~d~~v~iwd~~~~ 90 (240)
.+ |. .++.++.+|.+.++|..++
T Consensus 314 ~~--G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 314 ID--GKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp ET--TEEEEEEEECCTTSEEEEEETTTC
T ss_pred cC--CcEEEEEEEECCCCeEEEEECCCC
Confidence 23 44 6888889999999998766
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.21 E-value=0.00016 Score=61.79 Aligned_cols=182 Identities=10% Similarity=0.087 Sum_probs=102.0
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEEec
Q 026295 13 TSSSWNYCGQRLATGSTDGT-------------LSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACICS 78 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~~-------------i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~ 78 (240)
..++|+ ||+.|+.++.+.. |++|++..... ...++..... |...+..+.|+|+ |++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~~SpD--g~~l~~~~~ 253 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-DDRLVFGAIPAQHHRYVGATVTED--DRFLLISAA 253 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-GCEEEESCSGGGCCSEEEEEECTT--SCEEEEEEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-cceEEEecCCCCCeEEEEEEEcCC--CCEEEEEEc
Confidence 567999 9999999888743 88998863311 1234443344 4555788999999 987754332
Q ss_pred ----CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEE-EEeCC---CcEEEEEecCcccccceeEE
Q 026295 79 ----DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLV-AAYSD---GHVKVYELLDPLILKNWQLQ 150 (240)
Q Consensus 79 ----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d---g~v~iw~~~~~~~~~~~~~~ 150 (240)
...|.++|+..++. ....+..+....... |++ ++..|+ ....+ +.|..+++.++.. ..++
T Consensus 254 ~~~~~~~i~~~d~~~~~~------~~~~l~~~~~~~~~~-~~~--~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~-- 321 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENA------PLLTVQGDLDADVSL-VDN--KGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWR-- 321 (693)
T ss_dssp SSSSCCEEEEEETTSTTC------CCEEEECSSSSCEEE-EEE--ETTEEEEEECTTCTTCEEEEEETTSCCG-GGCE--
T ss_pred cCCCCcEEEEEECCCCCC------ceEEEeCCCCceEEE-Eec--cCCEEEEEECCCCCCCEEEEEeCCCCCc-cccE--
Confidence 24788888865421 223334344444444 555 555444 44433 5788888876321 1122
Q ss_pred eeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCC--eEEEEEeecCCCCcceeEeeecCCCCCCc
Q 026295 151 AEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLN--SSKVWEFDEAHNRWLPVAELALPEDRSDE 228 (240)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~--~i~iw~~~~~~~~~~~~~~~~~~~~h~~~ 228 (240)
.+..+... .+.|+|++. .|+....++ + .|++|++.... ...+.. .....
T Consensus 322 -~l~~~~~~------------~~~~s~~g~-----~lv~~~~~~----g~~~l~~~d~~g~~-----~~~l~~--p~~~~ 372 (693)
T 3iuj_A 322 -DLIPERQQ------------VLTVHSGSG-----YLFAEYMVD----ATARVEQFDYEGKR-----VREVAL--PGLGS 372 (693)
T ss_dssp -EEECCCSS------------CEEEEEETT-----EEEEEEEET----TEEEEEEECTTSCE-----EEEECC--SSSSE
T ss_pred -EEecCCCC------------EEEEEEECC-----EEEEEEEEC----CeeEEEEEECCCCe-----eEEeec--CCCce
Confidence 22222211 227888876 566665542 5 57777765321 122221 12235
Q ss_pred eEEEEEecCCC
Q 026295 229 VYAVAWALNIG 239 (240)
Q Consensus 229 v~~v~~sp~~~ 239 (240)
+..++++|++.
T Consensus 373 ~~~~~~~~d~~ 383 (693)
T 3iuj_A 373 VSGFNGKHDDP 383 (693)
T ss_dssp EEECCCCTTCS
T ss_pred EEeeecCCCCC
Confidence 66777777654
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.16 E-value=0.00046 Score=57.11 Aligned_cols=186 Identities=10% Similarity=0.028 Sum_probs=108.5
Q ss_pred CCCEEEEEeCC-CcEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEE-c-CCCCCCEEEEEec-----------------
Q 026295 20 CGQRLATGSTD-GTLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVW-V-PPEFGDAVACICS----------------- 78 (240)
Q Consensus 20 ~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~~~l~s~~~----------------- 78 (240)
||++|..+..+ ..|.+.|+. +.++...+.- .......+.+ . |+ +.+++.++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~-----t~~~~~ii~ip~g~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCD-----VMKCDAILEIPNAKGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETT-----TTEEEEEEECSSCCSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGG
T ss_pred CCCEEEEEcCCCCEEEEEECC-----CceEeeEEeCCCCCCCcceeeeecCC--CcEEEEecccccccCCCCcccccccc
Confidence 88877776654 569999998 6666664431 2245778887 4 77 888887742
Q ss_pred -CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC---------------cEEEEEecCcc
Q 026295 79 -DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG---------------HVKVYELLDPL 142 (240)
Q Consensus 79 -d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg---------------~v~iw~~~~~~ 142 (240)
++.+.+.|..+. +...++.-.. ....++++| +|.++++.+.+. .|.+.|.....
T Consensus 173 ~~~~vtvID~~t~-------~v~~qI~Vgg-~pd~~~~sp--dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 173 YVNVFTAVDADKW-------EVAWQVLVSG-NLDNCDADY--EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp EEEEEEEEETTTT-------EEEEEEEESS-CCCCEEECS--SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred cCceEEEEECCCC-------eEEEEEEeCC-CccceEECC--CCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence 346778787654 6666665322 456788988 899888888653 35566543211
Q ss_pred c---ccceeE---Eeeeeccc--c-e---eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 143 I---LKNWQL---QAEFQNAI--D-S---VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 143 ~---~~~~~~---~~~~~~~~--~-~---v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
. ..+... +..+.... . . .-+.++ ....+.++|++. ++++++..+ ..|.++|+.+..
T Consensus 243 ~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk-----~v~V~~~~s----~~VsVid~~~~~ 310 (595)
T 1fwx_A 243 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKK-----HLCVAGKLS----PTVTVLDVTRFD 310 (595)
T ss_dssp HHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSS-----EEEEECTTS----SBEEEEEGGGHH
T ss_pred EeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCC-----EEEEeCCCC----CeEEEEECcccc
Confidence 0 000000 11111111 0 0 000111 223789999997 565555443 899999998531
Q ss_pred C--------CcceeEeeecCCCCCCceEEEEEecCC
Q 026295 211 N--------RWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 211 ~--------~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
. ......+++ -....+.++|+||+
T Consensus 311 ~~~~~~l~~~~~v~~~v~----vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 311 AVFYENADPRSAVVAEPE----LGLGPLHTAFDGRG 342 (595)
T ss_dssp HHHHSCCCGGGGEEECCB----CCSCEEEEEECTTS
T ss_pred cccccccCcccceEEEcC----CCCCcceEEECCCC
Confidence 0 111223332 22368999999987
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.16 E-value=3.3e-05 Score=63.77 Aligned_cols=162 Identities=10% Similarity=0.067 Sum_probs=101.7
Q ss_pred cceEEEEE-C-CCCCEEEEEe------------------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCC
Q 026295 10 KGTTSSSW-N-YCGQRLATGS------------------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEF 69 (240)
Q Consensus 10 ~~v~~~~~-s-~~~~~l~~~~------------------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 69 (240)
.....+++ + |+++++.+++ .++.+.+.|.. +.+.+.++..- +....+..+|+
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~-----t~~v~~qI~Vg-g~pd~~~~spd-- 205 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD-----KWEVAWQVLVS-GNLDNCDADYE-- 205 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT-----TTEEEEEEEES-SCCCCEEECSS--
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECC-----CCeEEEEEEeC-CCccceEECCC--
Confidence 45778888 5 8999998885 33578888888 55666666532 23456778898
Q ss_pred CCEEEEEecCC---------------eEEEE-----------------------EeeeccCCCcccEE-EEEeeeccccE
Q 026295 70 GDAVACICSDG---------------SLLLW-----------------------EEIVEDAQPLQWKL-CKSFESTSTQV 110 (240)
Q Consensus 70 ~~~l~s~~~d~---------------~v~iw-----------------------d~~~~~~~~~~~~~-~~~~~~~~~~v 110 (240)
|.++++.+.+. .|.+. |..... .+. +..+.. ....
T Consensus 206 Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~-----~~~~~~~Ipv-g~~P 279 (595)
T 1fwx_A 206 GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA-----SSLFTRYIPI-ANNP 279 (595)
T ss_dssp SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG-----CCSSEEEEEE-ESSC
T ss_pred CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC-----CceeEEEEec-CCCc
Confidence 88888877553 23333 333210 022 233332 1345
Q ss_pred EeEEEeecCCCcEEEEEe-CCCcEEEEEecCccccc------ceeEEeeeecccceeeccccccceeeeEEEeCCCCCCC
Q 026295 111 LDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILK------NWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQ 183 (240)
Q Consensus 111 ~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~ 183 (240)
.++.++| +|+++++++ .+.+|.++|+.+..... ......++.... ....++|+|++.
T Consensus 280 hGv~~sP--DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~-----------gP~h~aF~~dG~--- 343 (595)
T 1fwx_A 280 HGCNMAP--DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL-----------GPLHTAFDGRGN--- 343 (595)
T ss_dssp CCEEECT--TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS-----------CEEEEEECTTSE---
T ss_pred eEEEEcC--CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC-----------CcceEEECCCCe---
Confidence 6789999 999876665 67899999998632110 011222222222 223789999984
Q ss_pred CceEEEEecCCCCCCCeEEEEEeec
Q 026295 184 GSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 184 ~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
..++..-| +.|.+|++..
T Consensus 344 --aY~t~~ld-----sqV~kwdi~~ 361 (595)
T 1fwx_A 344 --AYTSLFLD-----SQVVKWNIED 361 (595)
T ss_dssp --EEEEETTT-----TEEEEEEHHH
T ss_pred --EEEEEecC-----CcEEEEEhhH
Confidence 66666666 9999999876
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.09 E-value=0.00017 Score=61.36 Aligned_cols=71 Identities=8% Similarity=0.121 Sum_probs=47.8
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------cEEEEeCCCCCCCcEEEEeEeee--cC-------ccEEEEEE
Q 026295 13 TSSSWNYCGQRLATGSTDG-------------------TLSIFDSPDPSSSSFTCNLKTKV--HA-------GAILKVVW 64 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~-------------------~i~iw~~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~ 64 (240)
..+++++++.++..+..++ .|..+|.. +++.+-.++. |. .....+..
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~-----TG~~~W~~~~~~~d~wd~~~~~~p~l~~~ 320 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD-----TGKYKWHYQETPGDNWDYTSTQPMILADI 320 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT-----TCCEEEEEESSTTCCSCCCCCSCCEEEEE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC-----CCCEEEEEecCCCcccccccCCCcEEEec
Confidence 3578899998888887664 48888887 5566655542 21 11112222
Q ss_pred cCCCCC---CEEEEEecCCeEEEEEeeec
Q 026295 65 VPPEFG---DAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 65 ~~~~~~---~~l~s~~~d~~v~iwd~~~~ 90 (240)
..+ | ..++.++.+|.|.++|..++
T Consensus 321 ~~d--G~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 321 KIA--GKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp EET--TEEEEEEEECCTTSEEEEEETTTC
T ss_pred ccC--CcEeeEEEEECCCCEEEEEECCCC
Confidence 234 6 67888899999999998776
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.07 E-value=0.00089 Score=49.85 Aligned_cols=113 Identities=4% Similarity=-0.082 Sum_probs=67.5
Q ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEEEEEee
Q 026295 11 GTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLLLWEEI 88 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd~~ 88 (240)
....++|+++++.|..+ ..++.|..++..... ....+.........+++.+. +..+. +-...+.|.++++.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-----~~~~~~~~~~~p~~ia~d~~--~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-----PTTIIRQDLGSPEGIALDHL--GRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-----CEEEECTTCCCEEEEEEETT--TTEEEEEETTTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-----cEEEEECCCCCccEEEEEec--CCeEEEEECCCCEEEEEEcC
Confidence 46789999976655544 456789999987431 11112222246789999886 55444 44456788888875
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC---CCcEEEEEec
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS---DGHVKVYELL 139 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iw~~~ 139 (240)
.... ..+ ..........++++| ++..|..+.. .+.|..+++.
T Consensus 110 g~~~-----~~~--~~~~~~~P~~i~vd~--~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 110 GTQR-----RVL--FDTGLVNPRGIVTDP--VRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp SCSC-----EEE--ECSSCSSEEEEEEET--TTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCE-----EEE--EECCCCCccEEEEee--CCCEEEEEECCCCCcEEEEEecC
Confidence 3210 111 111224568899988 6555555443 3577777764
No 237
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.98 E-value=0.0024 Score=47.32 Aligned_cols=203 Identities=11% Similarity=0.099 Sum_probs=112.1
Q ss_pred chhcccccceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEEecCC
Q 026295 3 KAVATLDKGTTSSSWNYCGQRL-ATGSTDGTLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACICSDG 80 (240)
Q Consensus 3 ~~~~~h~~~v~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~d~ 80 (240)
+.|.+-.+.+..++|+|+++.| ++...++.|...|... +.+..+.- -....-.|++.++ +.++++.-.++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g------~v~~~i~l~g~~D~EGIa~~~~--g~~~vs~E~~~ 91 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG------DLIRTIPLDFVKDLETIEYIGD--NQFVISDERDY 91 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC------CEEEEEECSSCSSEEEEEECST--TEEEEEETTTT
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC------CEEEEEecCCCCChHHeEEeCC--CEEEEEECCCC
Confidence 4566666789999999987654 4567778888888762 23333321 1245778888877 77666655667
Q ss_pred eEEEEEeeeccCCCcccEEEEEee------eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeee
Q 026295 81 SLLLWEEIVEDAQPLQWKLCKSFE------STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
.+.++++..... ...+.... ........++|+| .+..|.++.......+|.+.............. .
T Consensus 92 ~l~~~~v~~~~~----i~~~~~~~~~~~~~~~N~g~EGLA~d~--~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~-~ 164 (255)
T 3qqz_A 92 AIYVISLTPNSE----VKILKKIKIPLQESPTNCGFEGLAYSR--QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD-K 164 (255)
T ss_dssp EEEEEEECTTCC----EEEEEEEECCCSSCCCSSCCEEEEEET--TTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC-H
T ss_pred cEEEEEcCCCCe----eeeeeeeccccccccccCCcceEEEeC--CCCEEEEEECcCCceEEEEcccccCCceeeecc-h
Confidence 888888754311 01122221 1234568999999 776666666655667777652100000111100 0
Q ss_pred cccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCC------CCc
Q 026295 155 NAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDR------SDE 228 (240)
Q Consensus 155 ~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h------~~~ 228 (240)
...... .......++++|.... +++..... +.+.++|.... ......|. .+. -..
T Consensus 165 ~~~~~~-----~~~d~S~l~~dp~tg~----lliLS~~s-----~~L~~~d~~g~---~~~~~~L~--~g~~~l~~~~~q 225 (255)
T 3qqz_A 165 ALQRQF-----TLDDVSGAEFNQQKNT----LLVLSHES-----RALQEVTLVGE---VIGEMSLT--KGSRGLSHNIKQ 225 (255)
T ss_dssp HHHHTC-----CSSCCCEEEEETTTTE----EEEEETTT-----TEEEEECTTCC---EEEEEECS--TTGGGCSSCCCS
T ss_pred hhcccc-----ccCCceeEEEcCCCCe----EEEEECCC-----CeEEEEcCCCC---EEEEEEcC--CccCCcccccCC
Confidence 000000 0112238999998762 55555554 88888886543 11122222 111 114
Q ss_pred eEEEEEecCCC
Q 026295 229 VYAVAWALNIG 239 (240)
Q Consensus 229 v~~v~~sp~~~ 239 (240)
--.|+|.|++.
T Consensus 226 pEGia~d~~G~ 236 (255)
T 3qqz_A 226 AEGVAMDASGN 236 (255)
T ss_dssp EEEEEECTTCC
T ss_pred CCeeEECCCCC
Confidence 57789998874
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.88 E-value=0.0017 Score=48.50 Aligned_cols=157 Identities=10% Similarity=-0.009 Sum_probs=95.9
Q ss_pred CCCEEEE-EeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccE
Q 026295 20 CGQRLAT-GSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWK 98 (240)
Q Consensus 20 ~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 98 (240)
+++.|.. .-.++.+.++|.. +.+.+.++..-...-..++ ++ |..++.+..++.|.+.|..+. +
T Consensus 74 ~g~~lyv~t~~~~~v~viD~~-----t~~v~~~i~~g~~~g~glt--~D--g~~l~vs~gs~~l~viD~~t~-------~ 137 (266)
T 2iwa_A 74 LNEKLYQVVWLKNIGFIYDRR-----TLSNIKNFTHQMKDGWGLA--TD--GKILYGSDGTSILYEIDPHTF-------K 137 (266)
T ss_dssp ETTEEEEEETTCSEEEEEETT-----TTEEEEEEECCSSSCCEEE--EC--SSSEEEECSSSEEEEECTTTC-------C
T ss_pred eCCEEEEEEecCCEEEEEECC-----CCcEEEEEECCCCCeEEEE--EC--CCEEEEECCCCeEEEEECCCC-------c
Confidence 3544444 4466899999998 6677777753212223344 46 665666666789999998665 5
Q ss_pred EEEEeeec-----cccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc--e-eecccccccee
Q 026295 99 LCKSFEST-----STQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID--S-VTMFRKASCIS 170 (240)
Q Consensus 99 ~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~-v~~~~~~~~~~ 170 (240)
.+..+.-. -.....+.|. ++..++....++.|.+.|..+ ++.+..+..... . +..........
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~---dg~lyvn~~~~~~V~vID~~t------g~V~~~I~~~g~~~~~~~~~~~~~~v~ 208 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYI---NGEVWANIWQTDCIARISAKD------GTLLGWILLPNLRKKLIDEGFRDIDVL 208 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEEETTT------CCEEEEEECHHHHHHHHHTTCTTCCCE
T ss_pred EEEEEEECCCCcccccceeEEEE---CCEEEEecCCCCeEEEEECCC------CcEEEEEECCCcccccccccccccCce
Confidence 55555421 1235677775 566555555678999999987 566666643210 0 00000001122
Q ss_pred eeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 171 ASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 171 ~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
+.++|+|++.. +++++... +.|...++....
T Consensus 209 nGIa~~~~~~~----lfVTgk~~-----~~v~~i~l~~~~ 239 (266)
T 2iwa_A 209 NGIAWDQENKR----IFVTGKLW-----PKLFEIKLHLVR 239 (266)
T ss_dssp EEEEEETTTTE----EEEEETTC-----SEEEEEEEEECC
T ss_pred EEEEEcCCCCE----EEEECCCC-----CeEEEEEEeccc
Confidence 48999999862 66666666 899999887643
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.87 E-value=0.00061 Score=58.03 Aligned_cols=76 Identities=17% Similarity=0.193 Sum_probs=50.0
Q ss_pred CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccce
Q 026295 80 GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
+.|..||+.++ +.+-.+.. ...+....+.. .+..++.++.||.+++||.++ ++.+..+......
T Consensus 457 g~l~A~D~~tG-------~~~W~~~~-~~~~~~g~~~~--~g~~v~~g~~dg~l~a~D~~t------G~~lw~~~~~~~~ 520 (677)
T 1kb0_A 457 GRLLAWDPVAQ-------KAAWSVEH-VSPWNGGTLTT--AGNVVFQGTADGRLVAYHAAT------GEKLWEAPTGTGV 520 (677)
T ss_dssp EEEEEEETTTT-------EEEEEEEE-SSSCCCCEEEE--TTTEEEEECTTSEEEEEETTT------CCEEEEEECSSCC
T ss_pred cEEEEEeCCCC-------cEEeecCC-CCCCcCcceEe--CCCEEEEECCCCcEEEEECCC------CceeeeeeCCCCc
Confidence 67888888766 55554443 23344555666 677788899999999999998 5666666543221
Q ss_pred eeccccccceeeeEEEeCCCC
Q 026295 160 VTMFRKASCISASISWNPQKG 180 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~ 180 (240)
.. .-+.|.+++.
T Consensus 521 ~~---------~p~~y~~~G~ 532 (677)
T 1kb0_A 521 VA---------APSTYMVDGR 532 (677)
T ss_dssp CS---------CCEEEEETTE
T ss_pred cc---------CCEEEEeCCE
Confidence 11 1566777764
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.81 E-value=0.005 Score=45.70 Aligned_cols=178 Identities=7% Similarity=-0.057 Sum_probs=97.6
Q ss_pred cceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec---CCeEEEE
Q 026295 10 KGTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS---DGSLLLW 85 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---d~~v~iw 85 (240)
.....+++++++..|..+ ...+.|.++++... ..+.+ ..........+++.|+ +..|..+.. .+.|..+
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~--~~~~~~~P~~i~vd~~--~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVL--FDTGLVNPRGIVTDPV--RGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEE--ECSSCSSEEEEEEETT--TTEEEEEECCSSSCEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCC---CEEEE--EECCCCCccEEEEeeC--CCEEEEEECCCCCcEEEEE
Confidence 356789999976555544 45678999998643 11211 1111245789999996 555544443 3577777
Q ss_pred EeeeccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEE-EEeCCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 86 EEIVEDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLV-AAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
++... ....+. ........++++| ++..|. +-...+.|.++++.. ......+.....+
T Consensus 152 ~~dg~--------~~~~~~~~~~~~P~gia~d~--~~~~lyv~d~~~~~I~~~~~~g------~~~~~~~~~~~~P---- 211 (267)
T 1npe_A 152 HMDGT--------NRRILAQDNLGLPNGLTFDA--FSSQLCWVDAGTHRAECLNPAQ------PGRRKVLEGLQYP---- 211 (267)
T ss_dssp ETTSC--------CCEEEECTTCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTE------EEEEEEEECCCSE----
T ss_pred ecCCC--------CcEEEEECCCCCCcEEEEcC--CCCEEEEEECCCCEEEEEecCC------CceEEEecCCCCc----
Confidence 76432 111121 2224568899988 765554 444567899998864 1111111111111
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
..++.. +. .|.++.... +.|.+++..+++ ....+.. +.....+.|++.|++
T Consensus 212 -------~gi~~d--~~-----~lyva~~~~----~~v~~~d~~~g~----~~~~i~~--g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 212 -------FAVTSY--GK-----NLYYTDWKT----NSVIAMDLAISK----EMDTFHP--HKQTRLYGITIALSQ 262 (267)
T ss_dssp -------EEEEEE--TT-----EEEEEETTT----TEEEEEETTTTE----EEEEECC--SSCCCCCCEEEECSC
T ss_pred -------eEEEEe--CC-----EEEEEECCC----CeEEEEeCCCCC----ceEEEcc--ccccccceeeecCcc
Confidence 145543 22 344444332 889888876543 2233322 111246788999875
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.79 E-value=0.00011 Score=57.71 Aligned_cols=91 Identities=9% Similarity=-0.133 Sum_probs=69.7
Q ss_pred cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEe----------cCCeEEEEEeeeccCCCcccEEEE
Q 026295 32 TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACIC----------SDGSLLLWEEIVEDAQPLQWKLCK 101 (240)
Q Consensus 32 ~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~ 101 (240)
+|.++|.. +.+.+.++..-..+ .+.++|+ +.+++.+. .++.|.+||..+. +.+.
T Consensus 47 ~vsvID~~-----t~~v~~~i~vG~~P--~i~~spD--g~~lyVan~~~~r~~~G~~~~~VsviD~~T~-------~vv~ 110 (368)
T 1mda_H 47 ENWVSCAG-----CGVTLGHSLGAFLS--LAVAGHS--GSDFALASTSFARSAKGKRTDYVEVFDPVTF-------LPIA 110 (368)
T ss_dssp EEEEEETT-----TTEEEEEEEECTTC--EEEECTT--SSCEEEEEEEETTTTSSSEEEEEEEECTTTC-------CEEE
T ss_pred eEEEEECC-----CCeEEEEEeCCCCC--ceEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCC-------CEEE
Confidence 78899998 67888888754555 7999999 88888775 3678999999876 7777
Q ss_pred Eeeec-------cccEEeEEEeecCCCcEEEEEeC--CCcEEE--EEecC
Q 026295 102 SFEST-------STQVLDVQFGVSSTSLKLVAAYS--DGHVKV--YELLD 140 (240)
Q Consensus 102 ~~~~~-------~~~v~~~~~~~~~~~~~l~~~~~--dg~v~i--w~~~~ 140 (240)
++... ......+.++| +|++++++.. +..|.+ +|+.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~Sp--DGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCA--SSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECT--TSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEECCCccccccCCCcceEEEcC--CCCEEEEEccCCCCeEEEEEEchhh
Confidence 77643 12356889999 9998888874 356888 77653
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.72 E-value=0.001 Score=50.80 Aligned_cols=145 Identities=11% Similarity=-0.026 Sum_probs=85.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeec
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
.+.++...+++. |..++.++.|..+|.. . +.+..+......+.++...++ +.+.+ ++ +.|..+| ..+
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g-----~~~~~~~~~~~~~~~~~~d~~--g~l~v-~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD-G-----TEKWRFKTNDAITSAASIGKD--GTIYF-GS--DKVYAIN-PDG 204 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT-S-----CEEEEEECSSCCCSCCEECTT--CCEEE-ES--SSEEEEC-TTS
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC-C-----CEeEEEecCCCceeeeEEcCC--CEEEE-Ee--CEEEEEC-CCC
Confidence 345556666666 5556777889999886 2 122333333455666777666 66544 44 7788888 433
Q ss_pred cCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeecccccccee
Q 026295 91 DAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCIS 170 (240)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (240)
+....+......+.++...+ ++. +..++.++.|..++... .....+......+.
T Consensus 205 -------~~~~~~~~~~~~~~~~~~~~--~g~-l~v~t~~~gl~~~~~~g-------~~~~~~~~~~~~~~--------- 258 (330)
T 3hxj_A 205 -------TEKWNFYAGYWTVTRPAISE--DGT-IYVTSLDGHLYAINPDG-------TEKWRFKTGKRIES--------- 258 (330)
T ss_dssp -------CEEEEECCSSCCCSCCEECT--TSC-EEEEETTTEEEEECTTS-------CEEEEEECSSCCCS---------
T ss_pred -------cEEEEEccCCcceeceEECC--CCe-EEEEcCCCeEEEECCCC-------CEeEEeeCCCCccc---------
Confidence 44444444445677888866 666 66677778888886432 22223222211111
Q ss_pred eeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEe
Q 026295 171 ASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEF 206 (240)
Q Consensus 171 ~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~ 206 (240)
.+...+++ .|.+++.+ +.|..+|.
T Consensus 259 -~~~~~~~g------~l~v~t~~-----ggl~~~d~ 282 (330)
T 3hxj_A 259 -SPVIGNTD------TIYFGSYD-----GHLYAINP 282 (330)
T ss_dssp -CCEECTTS------CEEEECTT-----CEEEEECT
T ss_pred -cceEcCCC------eEEEecCC-----CCEEEECC
Confidence 34455455 47777777 88988884
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.71 E-value=0.0017 Score=55.95 Aligned_cols=115 Identities=13% Similarity=0.030 Sum_probs=67.4
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----cEEEEeCCCCCCCcEEEE-eEeeecCccEEEEEEcCCCCCCEEEEEecCC---
Q 026295 11 GTTSSSWN-YCGQRLATGST-DG----TLSIFDSPDPSSSSFTCN-LKTKVHAGAILKVVWVPPEFGDAVACICSDG--- 80 (240)
Q Consensus 11 ~v~~~~~s-~~~~~l~~~~~-d~----~i~iw~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~--- 80 (240)
.+...+|| |||++||-... +| .|+++|+.... +.+ ..+. .....+.|+|+ |+.|+....|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~----~~l~~~~~---~~~~~~~WspD--g~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS----QTIADKVS---GTNGEIVWGPD--HTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT----CCCCCCEE---EECSCCEECSS--TTEEEEEEECTTCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC----EeCCcccc---CceeeEEEecC--CCEEEEEEECCCCC
Confidence 56788999 99998886543 22 49999997430 111 1111 11346899999 88777666542
Q ss_pred --eEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC---CCcEEEEEecC
Q 026295 81 --SLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS---DGHVKVYELLD 140 (240)
Q Consensus 81 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iw~~~~ 140 (240)
.|.++++.++.. .-..+.... .......+.|+| +|++|+..+. ...|.++|+.+
T Consensus 246 ~~~v~~~~lgt~~~---~~~lv~~~~-~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 246 ENKVWRHVMGKLQS---EDVCLYEEH-NPLFSAFMYKAA--DTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EEEEEEEETTSCGG---GCEEEEECC-CTTCEEEEEECT--TSSEEEEEEECSSCEEEEEEESSS
T ss_pred CCEEEEEECCCCch---hcEEEEecC-CCceEEEEEECC--CCCEEEEEecCCCCceEEEEECCC
Confidence 455566543211 001222211 223456788999 9998776653 33567777765
No 244
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.71 E-value=0.0019 Score=50.56 Aligned_cols=153 Identities=8% Similarity=0.052 Sum_probs=86.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec---------CccEE-EEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 20 CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH---------AGAIL-KVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h---------~~~v~-~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
.+..+.+++.++.|..+|.. +++.+-..... ...+. .+.. . +..++.++.++.|..+|..+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNAD-----DGKEIWSVSLAEKDGWFSKEPALLSGGVTV--S--GGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEECTTSEEEEEETT-----TCCEEEEEECCC---CCSCCCCCEEEEEEE--E--TTEEEEEETTSEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEEcc-----CCceeeeecCccccccccccCcccccCceE--e--CCEEEEEcCCCEEEEEECCC
Confidence 35678888888999999987 44444443321 12222 2222 2 55677788899999999876
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccce
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCI 169 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (240)
+ +.+-.............. .+..+++++.++.|..+|..+ ++............. .... .
T Consensus 123 G-------~~~W~~~~~~~~~~~p~~----~~~~v~v~~~~g~l~~~d~~t------G~~~W~~~~~~~~~~-~~~~-~- 182 (376)
T 3q7m_A 123 G-------TVAWQTKVAGEALSRPVV----SDGLVLIHTSNGQLQALNEAD------GAVKWTVNLDMPSLS-LRGE-S- 182 (376)
T ss_dssp C-------CEEEEEECSSCCCSCCEE----ETTEEEEECTTSEEEEEETTT------CCEEEEEECCC------CCC-C-
T ss_pred C-------CEEEEEeCCCceEcCCEE----ECCEEEEEcCCCeEEEEECCC------CcEEEEEeCCCCcee-ecCC-C-
Confidence 6 444344332221222222 233578888899999999877 333333322111100 0000 0
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
..... ++ .+.++..+ +.|..+|..+++..|..
T Consensus 183 --~~~~~-~~------~v~~g~~~-----g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 183 --APTTA-FG------AAVVGGDN-----GRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp --CCEEE-TT------EEEECCTT-----TEEEEEETTTCCEEEEE
T ss_pred --CcEEE-CC------EEEEEcCC-----CEEEEEECCCCcEEEEE
Confidence 11111 22 57777777 89999998877766654
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.0061 Score=48.93 Aligned_cols=158 Identities=9% Similarity=0.084 Sum_probs=88.9
Q ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-CC----eEEE
Q 026295 11 GTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-DG----SLLL 84 (240)
Q Consensus 11 ~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d~----~v~i 84 (240)
....++++| ++..|..+...+.|+.+|+... .. ..+.........|+|+++ ++.|+.+.. ++ .+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-----~v-~~~~~~~~~P~~ia~d~~--G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-----YV-STVYSGLSKVRTICWTHE--ADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-----EE-EEEECCCSCEEEEEECTT--SSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-----EE-EEEecCCCCcceEEEeCC--CCEEEEEeCCCCcccceEEE
Confidence 346889998 4556666665578888988732 22 222234456889999998 885555543 22 2332
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
.+. .+ .+.....+.. ......++++|. ++.++++-..++.|..++.... ...........
T Consensus 210 ~~~-~g-----~~~~~~~l~~-~~~p~giavdp~-~g~lyv~d~~~~~V~~~~~~~~------~~~~~~~~~~~------ 269 (430)
T 3tc9_A 210 LTR-ES-----GFKVITELTK-GQNCNGAETHPI-NGELYFNSWNAGQVFRYDFTTQ------ETTPLFTIQDS------ 269 (430)
T ss_dssp EEG-GG-----TSCSEEEEEE-CSSCCCEEECTT-TCCEEEEETTTTEEEEEETTTT------EEEEEEECSSS------
T ss_pred EeC-CC-----ceeeeeeecc-CCCceEEEEeCC-CCEEEEEECCCCEEEEEECCCC------cEEEEEEcCCC------
Confidence 332 21 1111122221 234567888762 3454555556788888887642 21111111110
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
...+.++|+|++. +|.++.... +.|..++.+.
T Consensus 270 ---~~P~gia~~pdG~-----~lyv~d~~~----~~I~~~~~d~ 301 (430)
T 3tc9_A 270 ---GWEFHIQFHPSGN-----YAYIVVVNQ----HYILRSDYDW 301 (430)
T ss_dssp ---SCCEEEEECTTSS-----EEEEEETTT----TEEEEEEEET
T ss_pred ---CcceeEEEcCCCC-----EEEEEECCC----CEEEEEeCCc
Confidence 0113799999986 566665443 8999988774
No 246
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.63 E-value=0.0026 Score=54.27 Aligned_cols=83 Identities=13% Similarity=0.140 Sum_probs=53.7
Q ss_pred CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccce
Q 026295 80 GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
|.|..||+.++ +.+-.++.+ ..+....+.. .+..++.++.||.++.||.++ ++.+.++......
T Consensus 455 g~l~A~D~~tG-------~~~W~~~~~-~~~~~g~~~t--agglvf~gt~dg~l~a~D~~t------G~~lw~~~~~~~~ 518 (689)
T 1yiq_A 455 GKLIAWDPVKQ-------QAAWEVPYV-TIFNGGTLST--AGNLVFEGSADGRVIAYAADT------GEKLWEQPAASGV 518 (689)
T ss_dssp EEEEEEETTTT-------EEEEEEEES-SSCCCCEEEE--TTTEEEEECTTSEEEEEETTT------CCEEEEEECSSCC
T ss_pred eeEEEEECCCC-------CeEeEccCC-CCccCccceE--CCCEEEEECCCCcEEEEECCC------CccceeeeCCCCc
Confidence 67888888776 555555543 2233345666 677788999999999999998 5666555543222
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEe
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGF 191 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~ 191 (240)
.. .-+.|..++. +++++.+
T Consensus 519 ~~---------~p~ty~~~G~----qyv~~~~ 537 (689)
T 1yiq_A 519 MA---------APVTYSVDGE----QYVTFMA 537 (689)
T ss_dssp CS---------CCEEEEETTE----EEEEEEE
T ss_pred cc---------CceEEEECCE----EEEEEEe
Confidence 11 1567777774 3666554
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.61 E-value=0.0047 Score=45.29 Aligned_cols=142 Identities=9% Similarity=0.055 Sum_probs=84.5
Q ss_pred CCCEEE-EEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccE
Q 026295 20 CGQRLA-TGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWK 98 (240)
Q Consensus 20 ~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 98 (240)
.+++|. ..-.++.+.+||.. +.+.+.++..- ..-..+++ + +..|+.+..++.|.++|..+. +
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~-----tl~~~~ti~~~-~~Gwglt~--d--g~~L~vSdgs~~l~~iDp~t~-------~ 135 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLA-----TLTPRARFRYP-GEGWALTS--D--DSHLYMSDGTAVIRKLDPDTL-------Q 135 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETT-----TTEEEEEEECS-SCCCEEEE--C--SSCEEEECSSSEEEEECTTTC-------C
T ss_pred eCCEEEEEEeeCCEEEEEECC-----cCcEEEEEeCC-CCceEEee--C--CCEEEEECCCCeEEEEeCCCC-------e
Confidence 344444 34467899999998 77888888742 33345554 4 555555556788999998665 5
Q ss_pred EEEEeeec--c---ccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc--eeecc-cccccee
Q 026295 99 LCKSFEST--S---TQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID--SVTMF-RKASCIS 170 (240)
Q Consensus 99 ~~~~~~~~--~---~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~v~~~-~~~~~~~ 170 (240)
.+..+.-. . ..+..+.|. +|..++..-.+..|.+.|..+ ++.+..+..... ..... ......-
T Consensus 136 ~~~~I~V~~~g~~~~~lNeLe~~---~G~lyanvw~s~~I~vIDp~t------G~V~~~idl~~l~~~~~~~~~~~~~vl 206 (243)
T 3mbr_X 136 QVGSIKVTAGGRPLDNLNELEWV---NGELLANVWLTSRIARIDPAS------GKVVAWIDLQALVPDADALTDSTNDVL 206 (243)
T ss_dssp EEEEEECEETTEECCCEEEEEEE---TTEEEEEETTTTEEEEECTTT------CBEEEEEECGGGSTTTTSCCCTTSSCE
T ss_pred EEEEEEEccCCcccccceeeEEe---CCEEEEEECCCCeEEEEECCC------CCEEEEEECCcCccccccccCCcCCce
Confidence 55555431 1 344566664 576555555677899999988 566655542211 00000 0011233
Q ss_pred eeEEEeCCCCCCCCceEEEEe
Q 026295 171 ASISWNPQKGENQGSSFVLGF 191 (240)
Q Consensus 171 ~~v~~~p~~~~~~~~~l~~~~ 191 (240)
|.++|+|... .+++||-
T Consensus 207 NGIA~d~~~~----~lfVTGK 223 (243)
T 3mbr_X 207 NGIAFDAEHD----RLFVTGK 223 (243)
T ss_dssp EEEEEETTTT----EEEEEET
T ss_pred EEEEEcCCCC----EEEEECC
Confidence 6899999876 2555553
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.60 E-value=0.0017 Score=49.53 Aligned_cols=148 Identities=13% Similarity=0.010 Sum_probs=86.4
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
..+.++.+++++.+.+.. +.|..+| . +.+.+..+......+.++...++ +. +..++.++.+..++...
T Consensus 177 ~~~~~~~~d~~g~l~v~t---~~l~~~d-~-----~g~~~~~~~~~~~~~~~~~~~~~--g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS---DKVYAIN-P-----DGTEKWNFYAGYWTVTRPAISED--GT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp CCCSCCEECTTCCEEEES---SSEEEEC-T-----TSCEEEEECCSSCCCSCCEECTT--SC-EEEEETTTEEEEECTTS
T ss_pred CceeeeEEcCCCEEEEEe---CEEEEEC-C-----CCcEEEEEccCCcceeceEECCC--Ce-EEEEcCCCeEEEECCCC
Confidence 345566777777755544 7788888 3 22333344444456777888776 65 45566677888877432
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccce
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCI 169 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (240)
..+..+......+..+.+.+ ++. |..++.+|.|..+|. + .+....+......+.
T Consensus 245 --------~~~~~~~~~~~~~~~~~~~~--~g~-l~v~t~~ggl~~~d~-~------g~~~~~~~~~~~~~~-------- 298 (330)
T 3hxj_A 245 --------TEKWRFKTGKRIESSPVIGN--TDT-IYFGSYDGHLYAINP-D------GTEKWNFETGSWIIA-------- 298 (330)
T ss_dssp --------CEEEEEECSSCCCSCCEECT--TSC-EEEECTTCEEEEECT-T------SCEEEEEECSSCCCS--------
T ss_pred --------CEeEEeeCCCCccccceEcC--CCe-EEEecCCCCEEEECC-C------CcEEEEEEcCCcccc--------
Confidence 33444443333344555544 555 778888888888885 3 233333322222222
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
++...+++. |.+++.+ |.+++...+.
T Consensus 299 --~~~~d~~g~------l~~gt~~-----G~~~~~~~~~ 324 (330)
T 3hxj_A 299 --TPVIDENGT------IYFGTRN-----GKFYALFNLE 324 (330)
T ss_dssp --CCEECTTCC------EEEECTT-----SCEEEEEC--
T ss_pred --ceEEcCCCE------EEEEcCC-----CeEEEEeccc
Confidence 555666664 7778887 9999877654
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.59 E-value=0.0063 Score=45.17 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=84.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEE
Q 026295 22 QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCK 101 (240)
Q Consensus 22 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 101 (240)
++.+..-.++.+.+||.. +++.+.++.. ...-..++ ++ +..|+.+..++.|.++|..+. +.+.
T Consensus 107 ~Ly~ltw~~~~v~V~D~~-----Tl~~~~ti~~-~~eGwGLt--~D--g~~L~vSdGs~~l~~iDp~T~-------~v~~ 169 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGM-----PPQRERTTRY-SGEGWGLC--YW--NGKLVRSDGGTMLTFHEPDGF-------ALVG 169 (268)
T ss_dssp CEEEEESSSCEEEEEETT-----TTEEEEEEEC-SSCCCCEE--EE--TTEEEEECSSSEEEEECTTTC-------CEEE
T ss_pred EEEEEEccCCEEEEEECC-----cCcEEEEEeC-CCceeEEe--cC--CCEEEEECCCCEEEEEcCCCC-------eEEE
Confidence 334444467899999998 7788888874 23334555 45 666666666889999997665 5555
Q ss_pred Eeee--cc---ccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccce--eec-cccccceeeeE
Q 026295 102 SFES--TS---TQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDS--VTM-FRKASCISASI 173 (240)
Q Consensus 102 ~~~~--~~---~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--v~~-~~~~~~~~~~v 173 (240)
.+.- .. ..+..+.|. +|...+....+..|.+.|..+ ++.+..+...... ... .......-|.+
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~---dG~lyanvw~s~~I~vIDp~T------G~V~~~Idl~~L~~~~~~~~~~~~~vlNGI 240 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECA---NGVIYANIWHSSDVLEIDPAT------GTVVGVIDASALTRAVAGQVTNPEAVLNGI 240 (268)
T ss_dssp EEECEETTEECCCEEEEEEE---TTEEEEEETTCSEEEEECTTT------CBEEEEEECHHHHHHHTTTCCCTTCCEEEE
T ss_pred EEEeCCCCcccccccccEEe---CCEEEEEECCCCeEEEEeCCC------CcEEEEEECCCCcccccccccCcCCceEEE
Confidence 5542 11 234567774 576555555678999999987 5666555432100 000 00011123589
Q ss_pred EEeCCCCCCCCceEEEEe
Q 026295 174 SWNPQKGENQGSSFVLGF 191 (240)
Q Consensus 174 ~~~p~~~~~~~~~l~~~~ 191 (240)
+|+|.... +++||-
T Consensus 241 A~dp~~~r----lfVTGK 254 (268)
T 3nok_A 241 AVEPGSGR----IFMTGK 254 (268)
T ss_dssp EECTTTCC----EEEEET
T ss_pred EEcCCCCE----EEEeCC
Confidence 99998762 666653
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.55 E-value=0.0095 Score=44.14 Aligned_cols=137 Identities=4% Similarity=0.011 Sum_probs=81.0
Q ss_pred CCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcc
Q 026295 18 NYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ 96 (240)
Q Consensus 18 s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 96 (240)
.++++.|.... .++.+.+||.. +.+.+.++.. ...=..++ ++ +..|+.+..+..|.++|..+.
T Consensus 93 t~~g~~ly~ltw~~~~v~v~D~~-----t~~~~~ti~~-~~eG~glt--~d--g~~L~~SdGs~~i~~iDp~T~------ 156 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFVWNIR-----NLRQVRSFNY-DGEGWGLT--HN--DQYLIMSDGTPVLRFLDPESL------ 156 (262)
T ss_dssp EEETTEEEEEESSSSEEEEEETT-----TCCEEEEEEC-SSCCCCEE--EC--SSCEEECCSSSEEEEECTTTC------
T ss_pred EEeCCEEEEEEeeCCEEEEEECc-----cCcEEEEEEC-CCCceEEe--cC--CCEEEEECCCCeEEEEcCCCC------
Confidence 33455544444 57899999998 6777877764 22223444 45 555555555678999998654
Q ss_pred cEEEEEeeec--c---ccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc--eeeccccccce
Q 026295 97 WKLCKSFEST--S---TQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID--SVTMFRKASCI 169 (240)
Q Consensus 97 ~~~~~~~~~~--~---~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 169 (240)
+.+..+.-. . ..++.+.|. +|...+..-.++.|.+.|..+ ++....+..... ...........
T Consensus 157 -~v~~~I~V~~~g~~~~~lNELe~~---~G~lyan~w~~~~I~vIDp~t------G~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 157 -TPVRTITVTAHGEELPELNELEWV---DGEIFANVWQTNKIVRIDPET------GKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp -SEEEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEECTTT------CBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred -eEEEEEEeccCCccccccceeEEE---CCEEEEEEccCCeEEEEECCC------CcEEEEEECCcCccccccccCcCCc
Confidence 555555431 1 334457774 677566555788999999987 566655543211 00000001122
Q ss_pred eeeEEEeCCCC
Q 026295 170 SASISWNPQKG 180 (240)
Q Consensus 170 ~~~v~~~p~~~ 180 (240)
-|.++|+|...
T Consensus 227 lNGIA~dp~~~ 237 (262)
T 3nol_A 227 LNGIAWDKEHH 237 (262)
T ss_dssp EEEEEEETTTT
T ss_pred eEEEEEcCCCC
Confidence 35899999886
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.43 E-value=0.016 Score=44.31 Aligned_cols=112 Identities=9% Similarity=-0.063 Sum_probs=65.4
Q ss_pred ceEEEEECC-CCCEEEEEeC-----------------CCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCE
Q 026295 11 GTTSSSWNY-CGQRLATGST-----------------DGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDA 72 (240)
Q Consensus 11 ~v~~~~~s~-~~~~l~~~~~-----------------d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 72 (240)
....+++++ +|++.++-.. ++.|..|+... .+...... .-.....|+|+++ +..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-----~~~~~~~~-~~~~p~gia~~~d--g~~ 198 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST-----KETTLLLK-ELHVPGGAEVSAD--SSF 198 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT-----TEEEEEEE-EESCCCEEEECTT--SSE
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC-----CEEEEecc-CCccCcceEECCC--CCE
Confidence 467789999 8987666432 35677777652 22211111 1234567999998 886
Q ss_pred EEEE-ecCCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC----------CCcEEEEEe
Q 026295 73 VACI-CSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS----------DGHVKVYEL 138 (240)
Q Consensus 73 l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----------dg~v~iw~~ 138 (240)
|..+ ...+.|..+++..... ...+..... .. ...+++++ +|.+.++... .+.|..+|.
T Consensus 199 lyv~d~~~~~I~~~~~~~~~~--~~~~~~~~~---~g-P~gi~~d~--~G~l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 199 VLVAEFLSHQIVKYWLEGPKK--GTAEVLVKI---PN-PGNIKRNA--DGHFWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp EEEEEGGGTEEEEEESSSTTT--TCEEEEEEC---SS-EEEEEECT--TSCEEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred EEEEeCCCCeEEEEECCCCcC--CccceEEeC---CC-CCCeEECC--CCCEEEEecCcccccccCCCccEEEEECC
Confidence 5554 4567899998864210 111222221 22 67788887 8876555443 355666664
No 252
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.40 E-value=0.008 Score=46.96 Aligned_cols=136 Identities=10% Similarity=0.022 Sum_probs=80.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEE
Q 026295 21 GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLC 100 (240)
Q Consensus 21 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 100 (240)
+..+..++.++.+..+|.. +++.+.... ......+.. . +..+..++.++.|..+|..++ +.+
T Consensus 239 ~~~v~~~~~~g~l~~~d~~-----tG~~~w~~~--~~~~~~~~~--~--~~~l~~~~~~g~l~~~d~~tG-------~~~ 300 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLR-----SGQIMWKRE--LGSVNDFIV--D--GNRIYLVDQNDRVMALTIDGG-------VTL 300 (376)
T ss_dssp TTEEEEECTTSCEEEEETT-----TCCEEEEEC--CCCEEEEEE--E--TTEEEEEETTCCEEEEETTTC-------CEE
T ss_pred CCEEEEEecCcEEEEEECC-----CCcEEeecc--CCCCCCceE--E--CCEEEEEcCCCeEEEEECCCC-------cEE
Confidence 4567777888999999987 444443333 223334433 2 556777788899999998766 444
Q ss_pred EEeee-ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCC
Q 026295 101 KSFES-TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQK 179 (240)
Q Consensus 101 ~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~ 179 (240)
..... ....+..... .+..|++++.+|.|.++|..+ ++....+......+. . ..... ++
T Consensus 301 w~~~~~~~~~~~~~~~----~~~~l~v~~~~g~l~~~d~~t------G~~~~~~~~~~~~~~------~---~~~~~-~~ 360 (376)
T 3q7m_A 301 WTQSDLLHRLLTSPVL----YNGNLVVGDSEGYLHWINVED------GRFVAQQKVDSSGFQ------T---EPVAA-DG 360 (376)
T ss_dssp EEECTTTTSCCCCCEE----ETTEEEEECTTSEEEEEETTT------CCEEEEEECCTTCBC------S---CCEEE-TT
T ss_pred EeecccCCCcccCCEE----ECCEEEEEeCCCeEEEEECCC------CcEEEEEecCCCcce------e---CCEEE-CC
Confidence 33331 1122233333 234588889999999999887 444444332211111 0 11111 22
Q ss_pred CCCCCceEEEEecCCCCCCCeEEEEE
Q 026295 180 GENQGSSFVLGFNSDTPQLNSSKVWE 205 (240)
Q Consensus 180 ~~~~~~~l~~~~~dd~~~~~~i~iw~ 205 (240)
.|.+++.+ |.|+.|+
T Consensus 361 ------~l~v~~~~-----G~l~~~~ 375 (376)
T 3q7m_A 361 ------KLLIQAKD-----GTVYSIT 375 (376)
T ss_dssp ------EEEEEBTT-----SCEEEEE
T ss_pred ------EEEEEeCC-----CEEEEEe
Confidence 67888887 9998886
No 253
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.39 E-value=0.02 Score=43.92 Aligned_cols=161 Identities=8% Similarity=-0.000 Sum_probs=97.4
Q ss_pred eEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeee----cC--ccEEEEEE---cCCCCCCEEEEEec---
Q 026295 12 TTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKV----HA--GAILKVVW---VPPEFGDAVACICS--- 78 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~----h~--~~v~~~~~---~~~~~~~~l~s~~~--- 78 (240)
-.+++|++...+|..++ ..++|..|+.... ....+ .+.+ .+ ..+..|.| .|. +.++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~--grL~vv~~~~~a 88 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNV-VIDGASSNGDGEQQMSGLSLLTHDNS--KRLFAVMKNAKS 88 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEE-CCTTTCCSSCCSEEEEEEEESSSSSC--CEEEEEEEETTT
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEE-ecCCccccCCCcceeeEEEEeccCCC--CcEEEEEccccc
Confidence 45789988666666665 7899999998733 22333 3322 11 13578999 576 777775442
Q ss_pred ----------CCeEEEEEee---eccCCCcccEEEEEee--e-----------ccccEEeEEEeecCCCcEEEEEeCC-C
Q 026295 79 ----------DGSLLLWEEI---VEDAQPLQWKLCKSFE--S-----------TSTQVLDVQFGVSSTSLKLVAAYSD-G 131 (240)
Q Consensus 79 ----------d~~v~iwd~~---~~~~~~~~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~~~l~~~~~d-g 131 (240)
+..|..+|+. ++ +.+.... . .......++..+ +|+..++++.- +
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg-------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~--~GnaYVt~s~~~~ 159 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENS-------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR--DGNSYVAFALGMP 159 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTC-------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT--TSCEEEEEEESSC
T ss_pred ccccccccCCCCEEEEEcCCcCCCC-------CEEEEecCccccccccccccccccCCceeEECC--CCCEEEeCCCCCC
Confidence 5779999987 33 2222222 1 112477899988 99988888877 7
Q ss_pred cEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 132 HVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 132 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.|...+... +....+.... +.....+..+.+.++|++. +|++.... +.+..+|+..
T Consensus 160 ~I~rV~pdG-------~~~~~~~~~~----~~~~~~~G~nGIv~~pdg~-----~Liv~~~~-----g~L~~fD~~~ 215 (334)
T 2p9w_A 160 AIARVSADG-------KTVSTFAWES----GNGGQRPGYSGITFDPHSN-----KLIAFGGP-----RALTAFDVSK 215 (334)
T ss_dssp EEEEECTTS-------CCEEEEEECC----CCSSSCCSCSEEEEETTTT-----EEEEESSS-----SSEEEEECSS
T ss_pred eEEEEeCCC-------CEEeeeeecC----CCcccccCcceEEEeCCCC-----EEEEEcCC-----CeEEEEcCCC
Confidence 655555432 1111111000 0111233445899999997 66666666 9999999773
No 254
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.34 E-value=0.015 Score=44.03 Aligned_cols=162 Identities=11% Similarity=0.124 Sum_probs=85.4
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec---------CCeEEE
Q 026295 20 CGQRLATGSTD------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS---------DGSLLL 84 (240)
Q Consensus 20 ~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---------d~~v~i 84 (240)
++++++.|+.+ ..+.+||.... +|+.+..+.........+.+ + +.+++.|+. -..+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~ 173 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTE---SWHTKPSMLTQRCSHGMVEA--N--GLIYVCGGSLGNNVSGRVLNSCEV 173 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--T--TEEEEECCEESCTTTCEECCCEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCC---ceEeCCCCcCCcceeEEEEE--C--CEEEEECCCCCCCCcccccceEEE
Confidence 56677777765 45888888754 67666544321111222222 3 566666653 234777
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeecccce
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
||+.. ..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+.....
T Consensus 174 yd~~~-----~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r~- 239 (306)
T 3ii7_A 174 YDPAT-----ETWTELCPMIEARKNHGLVFV----KDKIFAVGGQNGLGGLDNVEYYDIKL----NEWKMVSPMPWKGV- 239 (306)
T ss_dssp EETTT-----TEEEEECCCSSCCBSCEEEEE----TTEEEEECCEETTEEBCCEEEEETTT----TEEEECCCCSCCBS-
T ss_pred eCCCC-----CeEEECCCccchhhcceEEEE----CCEEEEEeCCCCCCCCceEEEeeCCC----CcEEECCCCCCCcc-
Confidence 88765 356766554433332223333 56667776643 3578888876 23554433221110
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeee
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELA 220 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~ 220 (240)
.. ..+.+ ++. +++.|+.+.......+.+||..+ ..|.....++
T Consensus 240 -------~~--~~~~~--~~~-----i~v~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~ 282 (306)
T 3ii7_A 240 -------TV--KCAAV--GSI-----VYVLAGFQGVGRLGHILEYNTET--DKWVANSKVR 282 (306)
T ss_dssp -------CC--EEEEE--TTE-----EEEEECBCSSSBCCEEEEEETTT--TEEEEEEEEE
T ss_pred -------ce--eEEEE--CCE-----EEEEeCcCCCeeeeeEEEEcCCC--CeEEeCCCcc
Confidence 01 02222 332 77888765322335677777655 4577766555
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.27 E-value=0.033 Score=43.92 Aligned_cols=158 Identities=1% Similarity=-0.187 Sum_probs=84.6
Q ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
....++|++.+..|... ...+.|..+++... ..+. .+.........+++.+. .+.++++-...+.|.+.++..
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~--~~~~~~~~p~glavd~~-~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEE--VVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEE--EECSSCSCCCCEEEETT-TTEEEEEETTTTEEEECBTTS
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEE--EEeCCCCCccEEEEEeC-CCeEEEEcCCCCeEEEEeCCC
Confidence 46788999765555444 45678888888743 1111 12211233456777765 144444545566787777653
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-CC-CcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-SD-GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
. .....+...-.....++++| .+..|.... .. +.|..+++.. .....+.... .
T Consensus 191 ~-------~~~~l~~~~l~~P~giavdp--~~g~ly~td~~~~~~I~r~~~dG-------~~~~~~~~~~---------~ 245 (386)
T 3v65_B 191 A-------HRKVLLWQSLEKPRAIALHP--MEGTIYWTDWGNTPRIEASSMDG-------SGRRIIADTH---------L 245 (386)
T ss_dssp C-------SCEEEECSSCSCEEEEEEET--TTTEEEEEECSSSCEEEEEETTS-------CSCEEEECSS---------C
T ss_pred C-------ceEEeecCCCCCCcEEEEEc--CCCeEEEeccCCCCEEEEEeCCC-------CCcEEEEECC---------C
Confidence 2 11111222234568899987 555444443 33 5677666543 1111111110 0
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
...+.++|+|... .|..+.... +.|..++++.
T Consensus 246 ~~PnGlavd~~~~-----~lY~aD~~~----~~I~~~d~dG 277 (386)
T 3v65_B 246 FWPNGLTIDYAGR-----RMYWVDAKH----HVIERANLDG 277 (386)
T ss_dssp SCEEEEEEEGGGT-----EEEEEETTT----TEEEEECTTS
T ss_pred CCeeeEEEeCCCC-----EEEEEECCC----CEEEEEeCCC
Confidence 1124799998765 455554432 7888888754
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.24 E-value=0.039 Score=41.84 Aligned_cols=185 Identities=11% Similarity=-0.011 Sum_probs=92.8
Q ss_pred cceEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDG--TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
.....++++++|+++++..... .|..++.... ..+.+..+. .......++..+. +..+++-..++.|..+|.
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g---~~~~~~~~~-~~~~~~g~~~~~~--~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG---TVETLLTLP-DAIFLNGITPLSD--TQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS---CEEEEEECT-TCSCEEEEEESSS--SEEEEEETTTTEEEEEET
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC---eEEEEEeCC-CccccCcccccCC--CcEEEEECCCCeEEEEeC
Confidence 4577899999998666554332 3555565422 222222221 1222344554444 444444445777777776
Q ss_pred eeccCCCcccEEEEE--------eeeccccEEeEEEeecCCCcEE-EEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 88 IVEDAQPLQWKLCKS--------FESTSTQVLDVQFGVSSTSLKL-VAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
..+.. +.... ....-.....+ +| ++.+| ++-...+.|..+++.........+....+ .
T Consensus 146 ~~~~~-----~v~~~~~~~~~~~~~~~~~~pngi--s~--dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~ 212 (306)
T 2p4o_A 146 VQPSG-----SIWLEHPMLARSNSESVFPAANGL--KR--FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----T 212 (306)
T ss_dssp TTTEE-----EEEEECGGGSCSSTTCCSCSEEEE--EE--ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----C
T ss_pred CCCcE-----eEEEECCccccccccCCCCcCCCc--Cc--CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----C
Confidence 43200 11100 00111223445 77 66544 44456788999998642111111211111 0
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEe---
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWA--- 235 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s--- 235 (240)
.. ..+++++++. ++++.... +.|.+++.. +. ......+... ....++++|.
T Consensus 213 ~P----------~gi~vd~dG~-----l~va~~~~-----~~V~~~~~~-G~--~~~~~~~~~~---~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 213 NI----------DDFAFDVEGN-----LYGATHIY-----NSVVRIAPD-RS--TTIIAQAEQG---VIGSTAVAFGQTE 266 (306)
T ss_dssp CC----------SSEEEBTTCC-----EEEECBTT-----CCEEEECTT-CC--EEEEECGGGT---CTTEEEEEECCST
T ss_pred CC----------CCeEECCCCC-----EEEEeCCC-----CeEEEECCC-CC--EEEEeecccc---cCCceEEEEeccc
Confidence 11 2788999886 55555445 789998854 21 1111122211 1368999998
Q ss_pred cCCC
Q 026295 236 LNIG 239 (240)
Q Consensus 236 p~~~ 239 (240)
||++
T Consensus 267 ~d~~ 270 (306)
T 2p4o_A 267 GDCT 270 (306)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7764
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.23 E-value=0.017 Score=49.15 Aligned_cols=70 Identities=11% Similarity=0.068 Sum_probs=46.6
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEeCCCCCCCcEEEEeEeee--cC-------ccEEEEEEc
Q 026295 14 SSSWNYCGQRLATGSTDGT-------------------LSIFDSPDPSSSSFTCNLKTKV--HA-------GAILKVVWV 65 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~~ 65 (240)
.++++++..++..+..++. |..+|.. +++.+-.++. |. .+.......
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~-----tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~ 308 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD-----TGKLAWHYQVTPGDSWDFTATQQITLAELN 308 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT-----TCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC-----CCceeeEeecCCCccccccCCCCcEEEEec
Confidence 5788888888888877663 8888887 5566655543 22 222222222
Q ss_pred CCCCCC---EEEEEecCCeEEEEEeeec
Q 026295 66 PPEFGD---AVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 66 ~~~~~~---~l~s~~~d~~v~iwd~~~~ 90 (240)
.+ |. .++.++.+|.+.++|..++
T Consensus 309 ~~--G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 309 ID--GKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp ET--TEEEEEEEECCTTSEEEEEETTTC
T ss_pred cC--CcEEEEEEEECCCCEEEEEECCCC
Confidence 24 54 6888889999999998766
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.20 E-value=0.05 Score=42.27 Aligned_cols=159 Identities=1% Similarity=-0.164 Sum_probs=86.3
Q ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
....++|++....|... ...+.|..+++.... .+.+ +.........+++.+. .+.++++-...+.|.+.++..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~~--~~~~~~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEEV--VSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE--ECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCC---ceEE--EeCCCCCccEEEEecC-CCeEEEEcCCCCeEEEEcCCC
Confidence 46788999766555544 456788888886431 1111 1111234567888765 144445555567888888754
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEE-EEeCC-CcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLV-AAYSD-GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
. .....+...-.....++++| .+..|. +-... +.|..+++.. .....+.... .
T Consensus 148 ~-------~~~~l~~~~l~~P~~iavdp--~~g~ly~td~~~~~~I~r~~~dG-------~~~~~~~~~~---------~ 202 (349)
T 3v64_C 148 A-------HRKVLLWQSLEKPRAIALHP--MEGTIYWTDWGNTPRIEASSMDG-------SGRRIIADTH---------L 202 (349)
T ss_dssp C-------SCEEEECTTCSCEEEEEEET--TTTEEEEEECSSSCEEEEEETTS-------CSCEESCCSS---------C
T ss_pred C-------ceEEEEeCCCCCcceEEEec--CcCeEEEeccCCCCEEEEEeCCC-------CCcEEEEECC---------C
Confidence 3 11111222234568899987 544444 43344 6677776653 1111111100 1
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
...+.++++|... .|..+.... +.|..++++..
T Consensus 203 ~~PnGla~d~~~~-----~lY~aD~~~----~~I~~~~~dG~ 235 (349)
T 3v64_C 203 FWPNGLTIDYAGR-----RMYWVDAKH----HVIERANLDGS 235 (349)
T ss_dssp SCEEEEEEETTTT-----EEEEEETTT----TEEEEEETTSC
T ss_pred CCcceEEEeCCCC-----EEEEEECCC----CEEEEEeCCCC
Confidence 1124899998775 455554432 78888887643
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.16 E-value=0.055 Score=42.67 Aligned_cols=110 Identities=5% Similarity=-0.091 Sum_probs=59.6
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEEEEEeeec
Q 026295 12 TTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLLLWEEIVE 90 (240)
Q Consensus 12 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~ 90 (240)
..|.+..+. .+|+.+.. ..|+..++... .... .+. ....+..++|.+. ...|+ +-...+.|..+++...
T Consensus 79 ~~C~~~~~~-~~l~~~~~-~~I~~i~~~~~---~~~~--~~~-~~~~~~gl~~d~~--~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 79 RSCKALGPE-PVLLFANR-IDIRQVLPHRS---EYTL--LLN-NLENAIALDFHHR--RELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp SCEEECSSC-CEEEEECB-SCEEEECTTSC---CCEE--EEC-SCSCEEEEEEETT--TTEEEEEETTTTEEEEEETTSC
T ss_pred CeECCcccc-ceeEeecC-ccceeeccCCC---cEEE--Eec-CCCccEEEEEecC--CCeEEEEeCCCCcEEEEecCCC
Confidence 345555553 34444433 56888887643 1111 122 2345779999876 44444 4445678888887643
Q ss_pred cCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEec
Q 026295 91 DAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELL 139 (240)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~ 139 (240)
.....+.........+++++. .+.++++-...+.|.+.++.
T Consensus 149 -------~~~~~~~~~~~~p~glavd~~-~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 149 -------NVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp -------CEEEEECSSCSCCCCEEEETT-TTEEEEEETTTTEEEECBTT
T ss_pred -------CcEEEEeCCCCCccEEEEEeC-CCeEEEEcCCCCeEEEEeCC
Confidence 222222222234567888761 34444555556777777665
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.16 E-value=0.05 Score=41.58 Aligned_cols=162 Identities=6% Similarity=-0.126 Sum_probs=86.4
Q ss_pred cceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEe-EeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNL-KTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
.....++|++.++.|..+ ..++.|..+++.... ...... .+...-.....+++.+. .+.+.++-...+.|.+.++
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~--~~~~~~~~~~~~~~~p~glavd~~-~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--GVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC--CCcccEEEEeCCCCCcCEEEEeec-CCeEEEEECCCCEEEEEeC
Confidence 346789999876555544 455889888886310 001111 12222234568888765 1444445456778988887
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC-C-CcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS-D-GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
... .....+...-.....++++| .+..|..+.. . +.|...++.. .....+....
T Consensus 107 ~g~-------~~~~~~~~~~~~P~~iavdp--~~g~ly~~d~~~~~~I~~~~~dG-------~~~~~~~~~~-------- 162 (316)
T 1ijq_A 107 KGV-------KRKTLFRENGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNG-------VDIYSLVTEN-------- 162 (316)
T ss_dssp TSS-------SEEEEEECTTCCEEEEEEET--TTTEEEEEECSSSCEEEEEETTS-------CCEEEEECSS--------
T ss_pred CCC-------ceEEEEECCCCCcceEEeCC--CCCEEEEEccCCCCeEEEEcCCC-------CCeEEEEECC--------
Confidence 542 22222222334568899987 5554544443 2 5677776642 1111111110
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
....+.++|+|++. .|..+.... +.|..++++.
T Consensus 163 -~~~P~gla~d~~~~-----~lY~~D~~~----~~I~~~d~dg 195 (316)
T 1ijq_A 163 -IQWPNGITLDLLSG-----RLYWVDSKL----HSISSIDVNG 195 (316)
T ss_dssp -CSCEEEEEEETTTT-----EEEEEETTT----TEEEEEETTS
T ss_pred -CCCceEEEEeccCC-----EEEEEECCC----CeEEEEecCC
Confidence 01124889998765 455554432 7888888764
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.14 E-value=0.057 Score=41.90 Aligned_cols=113 Identities=6% Similarity=-0.088 Sum_probs=62.4
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEEEEEee
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLLLWEEI 88 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd~~ 88 (240)
+..+|.+..++. +|+.+.. ..|+..++... ... ..+.. ...+..++|.+. ...|. +-...+.|..+++.
T Consensus 34 d~~~C~~~~~~~-~ll~~~~-~~I~~i~~~g~---~~~--~~~~~-~~~~~~l~~d~~--~~~ly~~D~~~~~I~r~~~~ 103 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFANR-IDIRQVLPHRS---EYT--LLLNN-LENAIALDFHHR--RELVFWSDVTLDRILRANLN 103 (349)
T ss_dssp TSSCEEESSSCC-EEEEECB-SCEEEECTTSC---CEE--EEECS-CSCEEEEEEETT--TTEEEEEETTTTEEEEEETT
T ss_pred CCCcccccccCc-eeEeecc-cceEEEeCCCC---eeE--EeecC-CCceEEEEEecc--ccEEEEEeccCCceEEEecC
Confidence 345566666643 4444433 46777777643 122 22222 345789999876 55444 44456788888875
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
.. .....+.........+++++. .+.++++-...+.|.+.++..
T Consensus 104 g~-------~~~~~~~~~~~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 104 GS-------NVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SC-------SCEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred CC-------CceEEEeCCCCCccEEEEecC-CCeEEEEcCCCCeEEEEcCCC
Confidence 43 111112222234567888761 344445555667888888764
No 262
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.14 E-value=0.029 Score=42.29 Aligned_cols=162 Identities=11% Similarity=0.118 Sum_probs=85.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-----CeEEEEEeee
Q 026295 20 CGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD-----GSLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~ 89 (240)
+++.++.|+.+ ..+.+||+... +|..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNID---QWSMLGDMQTAREGAGLVVA--S--GVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCC---eEEECCCCCCCcccceEEEE--C--CEEEEECCCCCCcccceEEEEeCCC
Confidence 56677777654 35788888744 67766554322221222222 4 6677777654 3577777754
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+....
T Consensus 185 -----~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r------- 244 (301)
T 2vpj_A 185 -----GHWTNVTPMATKRSGAGVALL----NDHIYVVGGFDGTAHLSSVEAYNIRT----DSWTTVTSMTTPR------- 244 (301)
T ss_dssp -----TEEEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSSBCCCEEEEETTT----TEEEEECCCSSCC-------
T ss_pred -----CcEEeCCCCCcccccceEEEE----CCEEEEEeCCCCCcccceEEEEeCCC----CcEEECCCCCCcc-------
Confidence 456766544433333233333 66777777754 4688898876 2355443221111
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeee
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELA 220 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~ 220 (240)
... ..+.+ ++. +++.|+.+.......|.+||..+ ..|.....++
T Consensus 245 -~~~--~~~~~--~~~-----i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~ 288 (301)
T 2vpj_A 245 -CYV--GATVL--RGR-----LYAIAGYDGNSLLSSIECYDPII--DSWEVVTSMG 288 (301)
T ss_dssp -BSC--EEEEE--TTE-----EEEECCBCSSSBEEEEEEEETTT--TEEEEEEEEE
T ss_pred -cce--eEEEE--CCE-----EEEEcCcCCCcccccEEEEcCCC--CeEEEcCCCC
Confidence 011 02222 332 77777765222123456666544 4576665544
No 263
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.09 E-value=0.019 Score=43.66 Aligned_cols=162 Identities=15% Similarity=0.195 Sum_probs=86.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-----CeEEEEEeee
Q 026295 20 CGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD-----GSLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~ 89 (240)
+++.++.|+.+ ..+.+||+... +|..+..+.........+.+ + +.+++.|+.+ ..+.+||+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERD---EWHLVAPMLTRRIGVGVAVL--N--RLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCC---eEeECCCCCccccceEEEEE--C--CEEEEEeCCCCCCcCceEEEEeCCC
Confidence 56677776643 35778888744 66665544322222222223 4 6667777654 3577777754
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+....
T Consensus 194 -----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r------- 253 (308)
T 1zgk_A 194 -----NEWRMITAMNTIRSGAGVCVL----HNCIYAAGGYDGQDQLNSVERYDVET----ETWTFVAPMKHRR------- 253 (308)
T ss_dssp -----TEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCSSSBCCCEEEEETTT----TEEEECCCCSSCC-------
T ss_pred -----CeEeeCCCCCCccccceEEEE----CCEEEEEeCCCCCCccceEEEEeCCC----CcEEECCCCCCCc-------
Confidence 356665554433333333333 66777777654 4588888876 2355443221111
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeee
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELA 220 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~ 220 (240)
... ++... ++. +++.|+.+.......+.+||..+ ..|.....++
T Consensus 254 -~~~---~~~~~-~~~-----i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p 297 (308)
T 1zgk_A 254 -SAL---GITVH-QGR-----IYVLGGYDGHTFLDSVECYDPDT--DTWSEVTRMT 297 (308)
T ss_dssp -BSC---EEEEE-TTE-----EEEECCBCSSCBCCEEEEEETTT--TEEEEEEECS
T ss_pred -cce---EEEEE-CCE-----EEEEcCcCCCcccceEEEEcCCC--CEEeecCCCC
Confidence 001 12221 222 77888765333335677777655 4576665544
No 264
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.09 E-value=0.061 Score=41.30 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=63.9
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 8 LDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 8 h~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
+...+..+++++++.+++.+...+..+-.|-... +++.+.. .....+..+.+.++ +.++ ..+.+|.+.+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~---tW~~~~~--~~~~~~~~~~~~~~--g~~~-~~~~~G~~~~s~~ 232 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQT---AWEPHNR--TTSRRLHNMGFTPD--GRLW-MIVNGGKIAFSDP 232 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCS---SCEEEEC--CSSSCEEEEEECTT--SCEE-EEETTTEEEEEET
T ss_pred CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCC---ceeECCC--CCCCccceeEECCC--CCEE-EEeCCceEEEecC
Confidence 3456889999999888877654333333332111 6666532 34567888999887 7655 4456787776532
Q ss_pred eeccCCCcccEEEEEe-eeccccEEeEEEeecCCCcEEEEEeCCCcE
Q 026295 88 IVEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSLKLVAAYSDGHV 133 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 133 (240)
..+ ..|..+..- ......+..+.+.+ ++.++++ +.+|.|
T Consensus 233 D~G----~tW~~~~~~~~~~~~~~~~v~~~~--~~~~~~~-g~~g~i 272 (327)
T 2xbg_A 233 DNS----ENWGELLSPLRRNSVGFLDLAYRT--PNEVWLA-GGAGAL 272 (327)
T ss_dssp TEE----EEECCCBCTTSSCCSCEEEEEESS--SSCEEEE-ESTTCE
T ss_pred CCC----CeeEeccCCcccCCcceEEEEecC--CCEEEEE-eCCCeE
Confidence 212 233332211 01123578888877 7775554 456766
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.08 E-value=0.075 Score=42.11 Aligned_cols=163 Identities=6% Similarity=-0.108 Sum_probs=86.5
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 10 KGTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
..+..++|++.+..|.-.. ..+.|+.+++..... .......+.........|++.+. .+.+.++-...+.|.+.++.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~-~~~~~~~~~~~~~~p~glavD~~-~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-VSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CCCEEEECSSCSCEEEEEEETT-TTEEEEEETTTTEEEEECTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCC-CCcceEEEeCCCCCcccEEEEec-CCceEEEECCCCeEEEEeCC
Confidence 4677899998665555544 557788888763110 00011112222345678888764 14444554556788888875
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe--CCCcEEEEEecCcccccceeEEeeeecccceeeccccc
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY--SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA 166 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (240)
.. .....+...-.....|+++| .+.+|.... ..+.|...++.. .....+....
T Consensus 190 g~-------~~~~l~~~~~~~P~~iavdp--~~g~ly~td~~~~~~I~~~~~dG-------~~~~~~~~~~--------- 244 (400)
T 3p5b_L 190 GV-------KRKTLFRENGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNG-------VDIYSLVTEN--------- 244 (400)
T ss_dssp TC-------SEEEEEECSSCCEEEEEEET--TTTEEEEEECSSSCCEEEEETTS-------CSCEEEECSS---------
T ss_pred CC-------ceEEEEeCCCCCcceEEEec--ccCeEEEEeCCCCCEEEEEeCCC-------CccEEEEECC---------
Confidence 43 22222332334568899988 555444443 236677776653 1111111100
Q ss_pred cceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 167 SCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 167 ~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
....+.++++|... .|..+.... +.|..++++.
T Consensus 245 l~~P~glavd~~~~-----~lY~aD~~~----~~I~~~d~dG 277 (400)
T 3p5b_L 245 IQWPNGITLDLLSG-----RLYWVDSKL----HSISSIDVNG 277 (400)
T ss_dssp CSCEEEEEEETTTT-----EEEEEETTT----TEEEEEETTS
T ss_pred CCceEEEEEEeCCC-----EEEEEECCC----CEEEEEeCCC
Confidence 01123788998775 455554432 6788887754
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.05 E-value=0.064 Score=40.88 Aligned_cols=114 Identities=16% Similarity=0.027 Sum_probs=65.9
Q ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe-ee-cCccEEEEEEcC-CCCCCEEEEEec--------
Q 026295 11 GTTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT-KV-HAGAILKVVWVP-PEFGDAVACICS-------- 78 (240)
Q Consensus 11 ~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~-~~~~~~l~s~~~-------- 78 (240)
....+++++ +++ |..+...+.|..++.... ..+.+... .+ .......+++.+ + |.+.++-..
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~p~~i~~d~~~--G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGG---HATQLATSVDGVPFKWLYAVTVDQRT--GIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCE---ECEEEESEETTEECSCEEEEEECTTT--CCEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCC---EEEEecccCCCCcccccceEEEecCC--CEEEEECCccccccccc
Confidence 578899998 565 445544455888886521 11112111 11 113467899998 8 876665432
Q ss_pred ---------CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEE-eCCCcEEEEEecC
Q 026295 79 ---------DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAA-YSDGHVKVYELLD 140 (240)
Q Consensus 79 ---------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iw~~~~ 140 (240)
++.|..+|...+ +.. .+...-.....++|+| ++.+|..+ +.++.|.+|++..
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~-------~~~-~~~~~~~~p~gia~~~--dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTK-------ETT-LLLKELHVPGGAEVSA--DSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTT-------EEE-EEEEEESCCCEEEECT--TSSEEEEEEGGGTEEEEEESSS
T ss_pred ceehcccCCCceEEEEeCCCC-------EEE-EeccCCccCcceEECC--CCCEEEEEeCCCCeEEEEECCC
Confidence 256777765433 221 1211123446789988 88755544 5568899999864
No 267
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.96 E-value=0.03 Score=42.29 Aligned_cols=158 Identities=15% Similarity=0.188 Sum_probs=83.5
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-------CeEEEEEe
Q 026295 20 CGQRLATGSTDG-----TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD-------GSLLLWEE 87 (240)
Q Consensus 20 ~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------~~v~iwd~ 87 (240)
+++.++.|+.++ .+.+||+... +|..+..+.........+.+ + +.+++.|+.+ ..+.+||+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~ 180 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSN---EWFHVAPMNTRRSSVGVGVV--G--GLLYAVGGYDVASRQCLSTVECYNA 180 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--T--TEEEEECCEETTTTEECCCEEEEET
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCC---eEeecCCCCCcccCceEEEE--C--CEEEEEeCCCCCCCccccEEEEEeC
Confidence 566777777553 4778887644 67666544322222222222 3 5666666543 34777777
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
.. ..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+....
T Consensus 181 ~~-----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~~~~~~r----- 242 (302)
T 2xn4_A 181 TT-----NEWTYIAEMSTRRSGAGVGVL----NNLLYAVGGHDGPLVRKSVEVYDPTT----NAWRQVADMNMCR----- 242 (302)
T ss_dssp TT-----TEEEEECCCSSCCBSCEEEEE----TTEEEEECCBSSSSBCCCEEEEETTT----TEEEEECCCSSCC-----
T ss_pred CC-----CcEEECCCCccccccccEEEE----CCEEEEECCCCCCcccceEEEEeCCC----CCEeeCCCCCCcc-----
Confidence 54 456766555433333333333 67777777754 3688888875 3355443321111
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCccee
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPV 216 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~ 216 (240)
... .+... ++. +++.|+.+.......+.+||..+. .|...
T Consensus 243 ---~~~---~~~~~-~~~-----i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~ 282 (302)
T 2xn4_A 243 ---RNA---GVCAV-NGL-----LYVVGGDDGSCNLASVEYYNPTTD--KWTVV 282 (302)
T ss_dssp ---BSC---EEEEE-TTE-----EEEECCBCSSSBCCCEEEEETTTT--EEEEC
T ss_pred ---ccC---eEEEE-CCE-----EEEECCcCCCcccccEEEEcCCCC--eEEEC
Confidence 111 12211 332 778887653222245788887654 46544
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.93 E-value=0.081 Score=40.06 Aligned_cols=114 Identities=10% Similarity=0.045 Sum_probs=65.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC--eEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG--SLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~--~v~iwd~ 87 (240)
.....++|+++|+++++-..++.|..|+.... ....+. -......+++.++ |+++++..... .|..++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~------~~~~~~-~~~~p~gia~~~d--G~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN------QQIHAT-VEGKVSGLAFTSN--GDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC------EEEEEE-CSSEEEEEEECTT--SCEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc------eEEEEe-CCCCceeEEEcCC--CcEEEEeccCCcceEEEEcC
Confidence 45678999999997777767889999987631 122222 2356889999998 88665543322 3555554
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
..+ ....+..... ......++..+ .+..+++-..++.|.++|...
T Consensus 103 ~~g-----~~~~~~~~~~-~~~~~g~~~~~--~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 103 SDG-----TVETLLTLPD-AIFLNGITPLS--DTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp TTS-----CEEEEEECTT-CSCEEEEEESS--SSEEEEEETTTTEEEEEETTT
T ss_pred CCC-----eEEEEEeCCC-ccccCcccccC--CCcEEEEECCCCeEEEEeCCC
Confidence 333 1122222211 12223444444 555444444578888888653
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.86 E-value=0.13 Score=41.27 Aligned_cols=158 Identities=11% Similarity=0.066 Sum_probs=84.2
Q ss_pred ceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC---Ce-EEE
Q 026295 11 GTTSSSWNYC--GQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD---GS-LLL 84 (240)
Q Consensus 11 ~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---~~-v~i 84 (240)
.-..++|+|+ ...|..+...+.|+.++... ... ..+.........++++++ |.++++-... .. +..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~-----g~v-~~~~~~~~~P~giavd~d--G~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN-----QYV-DIKTTNIGQCADVNFTLN--GDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT-----TEE-EEECCCCSCEEEEEECTT--CCEEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC-----CEE-EEeecCCCCccEEEECCC--CCEEEEcCCCCcccceEEE
Confidence 3568999985 44555554448899999862 222 233333456889999999 8844443211 11 222
Q ss_pred EEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeee-ecccceeecc
Q 026295 85 WEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEF-QNAIDSVTMF 163 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 163 (240)
.+.... +.....+. .-.....++++|. ++.++++-..++.|..++..+ ......+ ......
T Consensus 212 ~~~~~~------~~~~~~~~-~~~~P~giavd~~-~G~lyv~d~~~~~V~~~d~~~------g~~~~~~~~~~~~~---- 273 (433)
T 4hw6_A 212 FTRASG------FTERLSLC-NARGAKTCAVHPQ-NGKIYYTRYHHAMISSYDPAT------GTLTEEEVMMDTKG---- 273 (433)
T ss_dssp ECGGGT------TCCEEEEE-ECSSBCCCEECTT-TCCEEECBTTCSEEEEECTTT------CCEEEEEEECSCCS----
T ss_pred EECCCC------eecccccc-ccCCCCEEEEeCC-CCeEEEEECCCCEEEEEECCC------CeEEEEEeccCCCC----
Confidence 222111 11111111 1234466788762 344444444667888888764 2221111 111110
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
....++|+|++. .|.++.... +.|+.++++.
T Consensus 274 -----~~~~ia~dpdG~-----~LYvad~~~----~~I~~~~~d~ 304 (433)
T 4hw6_A 274 -----SNFHIVWHPTGD-----WAYIIYNGK----HCIYRVDYNR 304 (433)
T ss_dssp -----SCEEEEECTTSS-----EEEEEETTT----TEEEEEEBCT
T ss_pred -----CcccEEEeCCCC-----EEEEEeCCC----CEEEEEeCCC
Confidence 012589999986 565555433 7888888764
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.85 E-value=0.1 Score=40.04 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=64.9
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEee
Q 026295 9 DKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEI 88 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~ 88 (240)
.+.+..+.+.+++..++.+ .++.| |.....+ .+++.+.. .....+..+.+.++ +.+++.+ .++.+..-+
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG-~tW~~~~~--~~~~~~~~~~~~~~--~~~~~~g-~~G~~~~S~-- 189 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSG-KNWQALVQ--EAIGVMRNLNRSPS--GEYVAVS-SRGSFYSTW-- 189 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCE--EEESSTT-SSEEEEEC--SCCCCEEEEEECTT--SCEEEEE-TTSSEEEEE--
T ss_pred CCCeEEEEEECCCCEEEEe-CCccE--EEEcCCC-CCCEEeec--CCCcceEEEEEcCC--CcEEEEE-CCCcEEEEe--
Confidence 3457778877777666655 45654 3222211 16766542 34567889999887 7777665 445443211
Q ss_pred eccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEE
Q 026295 89 VEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVY 136 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw 136 (240)
+..+..|+.+.. .....+..+.+.+ ++. +..++.+|.+.+.
T Consensus 190 --d~gG~tW~~~~~--~~~~~~~~~~~~~--~g~-~~~~~~~G~~~~s 230 (327)
T 2xbg_A 190 --EPGQTAWEPHNR--TTSRRLHNMGFTP--DGR-LWMIVNGGKIAFS 230 (327)
T ss_dssp --CTTCSSCEEEEC--CSSSCEEEEEECT--TSC-EEEEETTTEEEEE
T ss_pred --CCCCCceeECCC--CCCCccceeEECC--CCC-EEEEeCCceEEEe
Confidence 111256776532 2345678888877 777 4456667877665
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.85 E-value=0.2 Score=43.43 Aligned_cols=118 Identities=6% Similarity=-0.114 Sum_probs=63.7
Q ss_pred cceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCC-EEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLA-TGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGD-AVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~d~~v~iwd~ 87 (240)
..+..++|++...+|. +-...+.|+.+++..... .......+.........|++.+. +. ++++-...+.|.+.++
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~-~~~~~~vi~~~l~~P~GLAvD~~--~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-VSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEET
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCC-CcceeEEEecCCCCcceeeeeec--CCcEEEEecCCCeEEEEeC
Confidence 4567889988555444 444557788888763210 00111122222344567888766 54 4445455678888887
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-CC-CcEEEEEec
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-SD-GHVKVYELL 139 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d-g~v~iw~~~ 139 (240)
... .....+...-.....|+++| ...+|.... .+ +.|...++.
T Consensus 501 dG~-------~~~~l~~~~l~~P~gIaVDp--~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 501 KGV-------KRKTLFRENGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp TSS-------SEEEEEECTTCCEEEEEEET--TTTEEEEEECSSSCEEEEEETT
T ss_pred CCC-------eEEEEEeCCCCCcceEEEec--CCCCEEEecCCCCCeEEEEecC
Confidence 643 22222223334578899988 544444443 22 567777665
No 272
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.84 E-value=0.09 Score=39.56 Aligned_cols=162 Identities=14% Similarity=0.172 Sum_probs=84.0
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC-----eEEEEEeee
Q 026295 20 CGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG-----SLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~ 89 (240)
+++.++.|+.+ ..+.+||+.......++.+..+.........+.+ + +.+++.|+.++ .+.+||...
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--G--DMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--C--CEEEEEcccCCCcccceEEEEcCCC
Confidence 56677777754 3588899875410117666554422222222222 4 66677766543 567777654
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeecccceeeccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFR 164 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 164 (240)
..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+....
T Consensus 138 -----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~----~~W~~~~~~p~~r------- 197 (301)
T 2vpj_A 138 -----DQWSMLGDMQTAREGAGLVVA----SGVIYCLGGYDGLNILNSVEKYDPHT----GHWTNVTPMATKR------- 197 (301)
T ss_dssp -----TEEEEEEECSSCCBSCEEEEE----TTEEEEECCBCSSCBCCCEEEEETTT----TEEEEECCCSSCC-------
T ss_pred -----CeEEECCCCCCCcccceEEEE----CCEEEEECCCCCCcccceEEEEeCCC----CcEEeCCCCCccc-------
Confidence 457776655543333233322 67777777654 4578888765 2355443221110
Q ss_pred cccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeE
Q 026295 165 KASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVA 217 (240)
Q Consensus 165 ~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~ 217 (240)
... ..+.+ ++. +++.|+.+.......+.+||..+. .|....
T Consensus 198 -~~~--~~~~~--~~~-----i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~ 238 (301)
T 2vpj_A 198 -SGA--GVALL--NDH-----IYVVGGFDGTAHLSSVEAYNIRTD--SWTTVT 238 (301)
T ss_dssp -BSC--EEEEE--TTE-----EEEECCBCSSSBCCCEEEEETTTT--EEEEEC
T ss_pred -ccc--eEEEE--CCE-----EEEEeCCCCCcccceEEEEeCCCC--cEEECC
Confidence 001 02222 222 777777652222256778877553 355443
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.78 E-value=0.081 Score=44.07 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=20.5
Q ss_pred eEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 186 SFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 186 ~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
++.+++.| +.|+.||..+++..|..
T Consensus 477 ~v~~g~~d-----g~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 477 LVWYATLD-----GYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEEEECTT-----SEEEEEETTTCCEEEEE
T ss_pred EEEEEcCC-----CeEEEEECCCCCEEEEE
Confidence 56777777 99999999998877755
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.76 E-value=0.014 Score=49.46 Aligned_cols=114 Identities=11% Similarity=-0.008 Sum_probs=74.4
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEEec-C
Q 026295 14 SSSWNY-CGQRLATGSTDG-----------TLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACICS-D 79 (240)
Q Consensus 14 ~~~~s~-~~~~l~~~~~d~-----------~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~-d 79 (240)
.+++.+ +++.++.|+.+. .+.+||.... ++..+..+.. +......+++..+ +.+++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~---~w~~~~~~~~~~~~~~~~~~~~~~--g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG---IVSDRTVTVTKHDMFCPGISMDGN--GQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC---CBCCCEEEECSCCCSSCEEEECTT--SCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC---cEEeCcccCCCCCCccccccCCCC--CCEEEeCCCCC
Confidence 566777 888888887643 5788998754 4544444432 2223345677787 888888884 4
Q ss_pred CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-CC-----CcEEEEEecC
Q 026295 80 GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-SD-----GHVKVYELLD 140 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d-----g~v~iw~~~~ 140 (240)
..+.+||... ..|..+..+...+.. .+++..+ ++++++.|+ .+ ..+.+||..+
T Consensus 265 ~~v~~yd~~t-----~~W~~~~~~~~~R~~-~s~~~~~--dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 265 KKTSLYDSSS-----DSWIPGPDMQVARGY-QSSATMS--DGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp TCEEEEEGGG-----TEEEECCCCSSCCSS-CEEEECT--TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred CceEEecCcC-----CceeECCCCCccccc-cceEEec--CCeEEEEeCcccCCcccccceEeCCCC
Confidence 5799999875 356665544433222 3445555 788888888 34 4689999875
No 275
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.76 E-value=0.052 Score=41.00 Aligned_cols=105 Identities=12% Similarity=0.086 Sum_probs=60.2
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC------CeEEEEEeee
Q 026295 20 CGQRLATGSTD----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD------GSLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------~~v~iwd~~~ 89 (240)
+++.++.|+.+ ..+.+||+... +|..+..+.........+.+ + +.+++.|+.+ ..+.+||...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD---SWYSKLGPPTPRDSLAACAA--E--GKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT---EEEEEECCSSCCBSCEEEEE--T--TEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC---eEEECCCCCccccceeEEEE--C--CEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 56677777754 56888888754 67666554322222222222 4 6677777655 3577778755
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC---------CCcEEEEEecC
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS---------DGHVKVYELLD 140 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---------dg~v~iw~~~~ 140 (240)
..|..+..+.........+.+ ++.+++.|+. -..+.+||+.+
T Consensus 128 -----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 128 -----ESWHTKPSMLTQRCSHGMVEA----NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp -----TEEEEECCCSSCCBSCEEEEE----TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred -----CceEeCCCCcCCcceeEEEEE----CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 356666555433333223332 6666666653 34578888876
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.75 E-value=0.1 Score=38.61 Aligned_cols=170 Identities=9% Similarity=0.031 Sum_probs=94.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee------ecCccEEEEEEcCCCCCCEEEEEecCCeEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK------VHAGAILKVVWVPPEFGDAVACICSDGSLLL 84 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~i 84 (240)
....+++.+++.++++.-.++.+.++++.... ....+.... ..+...-.|+|.|. ++.|.++.......+
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~--~i~~~~~~~~~~~~~~~N~g~EGLA~d~~--~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNS--EVKILKKIKIPLQESPTNCGFEGLAYSRQ--DHTFWFFKEKNPIEV 146 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTC--CEEEEEEEECCCSSCCCSSCCEEEEEETT--TTEEEEEEESSSEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC--eeeeeeeeccccccccccCCcceEEEeCC--CCEEEEEECcCCceE
Confidence 46678888888776776667889899886543 212222221 12344679999998 777777766656677
Q ss_pred EEeeeccCCCcccEEEEE--ee--eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccccee
Q 026295 85 WEEIVEDAQPLQWKLCKS--FE--STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 85 wd~~~~~~~~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
|.+..... ......... +. ........++++|. .+.+++.......+..+|... +....+.-....
T Consensus 147 ~~~~g~~~-~~~l~i~~~~~~~~~~~~~d~S~l~~dp~-tg~lliLS~~s~~L~~~d~~g-------~~~~~~~L~~g~- 216 (255)
T 3qqz_A 147 YKVNGLLS-SNELHISKDKALQRQFTLDDVSGAEFNQQ-KNTLLVLSHESRALQEVTLVG-------EVIGEMSLTKGS- 216 (255)
T ss_dssp EEEESTTC-SSCCEEEECHHHHHTCCSSCCCEEEEETT-TTEEEEEETTTTEEEEECTTC-------CEEEEEECSTTG-
T ss_pred EEEccccc-CCceeeecchhhccccccCCceeEEEcCC-CCeEEEEECCCCeEEEEcCCC-------CEEEEEEcCCcc-
Confidence 77752100 011122111 00 12235688999984 556666666777788888663 333332211100
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEE
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWE 205 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~ 205 (240)
....+..-....|++.|++. |.+.+.. +.++.|.
T Consensus 217 ~~l~~~~~qpEGia~d~~G~------lyIvsE~-----n~~y~f~ 250 (255)
T 3qqz_A 217 RGLSHNIKQAEGVAMDASGN------IYIVSEP-----NRFYRFT 250 (255)
T ss_dssp GGCSSCCCSEEEEEECTTCC------EEEEETT-----TEEEEEE
T ss_pred CCcccccCCCCeeEECCCCC------EEEEcCC-----ceEEEEE
Confidence 00000011223899999985 5555777 7665554
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.73 E-value=0.11 Score=44.84 Aligned_cols=73 Identities=8% Similarity=-0.074 Sum_probs=44.5
Q ss_pred EEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC---CeEEE
Q 026295 13 TSSSWNYCGQRLATGSTDG-----TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD---GSLLL 84 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---~~v~i 84 (240)
..++|+|||+.|+....|. .|.++++..... ....+..- ........+.|+|+ |++|+....+ ..|.+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-~~~lv~~~-~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-EDVCLYEE-HNPLFSAFMYKAAD--TNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-GCEEEEEC-CCTTCEEEEEECTT--SSEEEEEEECSSCEEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch-hcEEEEec-CCCceEEEEEECCC--CCEEEEEecCCCCceEEE
Confidence 4679999999888777652 466777753210 11222211 22234567899999 9887765532 35677
Q ss_pred EEeee
Q 026295 85 WEEIV 89 (240)
Q Consensus 85 wd~~~ 89 (240)
+|+..
T Consensus 300 ~d~~~ 304 (751)
T 2xe4_A 300 LDLRK 304 (751)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 77754
No 278
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.69 E-value=0.1 Score=39.25 Aligned_cols=159 Identities=17% Similarity=0.199 Sum_probs=82.2
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC-----eEEEEEeee
Q 026295 20 CGQRLATGSTD-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG-----SLLLWEEIV 89 (240)
Q Consensus 20 ~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~ 89 (240)
+++.++.|+.+ ..+.+||.... +|+.+..+.........+.+ + +.+++.|+.++ .+.+||+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~ 133 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKD---QWTSVANMRDRRSTLGAAVL--N--GLLYAVGGFDGSTGLSSVEAYNIKS 133 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--T--TEEEEEEEECSSCEEEEEEEEETTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCC---ceeeCCCCCccccceEEEEE--C--CEEEEEcCCCCCccCceEEEEeCCC
Confidence 56677777754 35788888754 67666554422222222222 4 66777776554 455666544
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-------CcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-------GHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ ..|..+..+....
T Consensus 134 -----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r----- 195 (302)
T 2xn4_A 134 -----NEWFHVAPMNTRRSSVGVGVV----GGLLYAVGGYDVASRQCLSTVECYNATT----NEWTYIAEMSTRR----- 195 (302)
T ss_dssp -----TEEEEECCCSSCCBSCEEEEE----TTEEEEECCEETTTTEECCCEEEEETTT----TEEEEECCCSSCC-----
T ss_pred -----CeEeecCCCCCcccCceEEEE----CCEEEEEeCCCCCCCccccEEEEEeCCC----CcEEECCCCcccc-----
Confidence 457766555443333233332 66666766542 3477888765 2355443221110
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeE
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVA 217 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~ 217 (240)
... ++... ++. +++.|+.+.......+.+||..+. .|....
T Consensus 196 ---~~~---~~~~~-~~~-----iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~ 236 (302)
T 2xn4_A 196 ---SGA---GVGVL-NNL-----LYAVGGHDGPLVRKSVEVYDPTTN--AWRQVA 236 (302)
T ss_dssp ---BSC---EEEEE-TTE-----EEEECCBSSSSBCCCEEEEETTTT--EEEEEC
T ss_pred ---ccc---cEEEE-CCE-----EEEECCCCCCcccceEEEEeCCCC--CEeeCC
Confidence 000 12211 222 777887652222246777776543 355443
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.68 E-value=0.14 Score=39.10 Aligned_cols=173 Identities=8% Similarity=-0.068 Sum_probs=86.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEE-EEecCCeEEEEEeeeccCCCcccEEEE
Q 026295 23 RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVA-CICSDGSLLLWEEIVEDAQPLQWKLCK 101 (240)
Q Consensus 23 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~ 101 (240)
+|+.+.. ..|+..++.... ....+. ....+..+.|.+. +..|. +-...+.|..+++...... . ....
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~-----~~~~~~-~~~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~-~--~~~~ 70 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSE-----YTSLIP-NLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGV-S--SYDT 70 (316)
T ss_dssp EEEEECB-SSEEEEETTSCC-----CEEEEC-SCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC-----------CEE
T ss_pred EEEEECC-CeEEEEECCCcc-----eEehhc-CCCceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCC-c--ccEE
Confidence 3444443 568888987431 122222 2355779999886 55444 4445678888887641000 0 1111
Q ss_pred EeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCC
Q 026295 102 SFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGE 181 (240)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~ 181 (240)
.+...-.....+++++. .+.++++-..++.|.++++... .....+...... .+.++.+|.+.
T Consensus 71 ~~~~~~~~p~glavd~~-~~~ly~~d~~~~~I~~~~~~g~------~~~~~~~~~~~~----------P~~iavdp~~g- 132 (316)
T 1ijq_A 71 VISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGV------KRKTLFRENGSK----------PRAIVVDPVHG- 132 (316)
T ss_dssp EECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSS------SEEEEEECTTCC----------EEEEEEETTTT-
T ss_pred EEeCCCCCcCEEEEeec-CCeEEEEECCCCEEEEEeCCCC------ceEEEEECCCCC----------cceEEeCCCCC-
Confidence 12222234577888751 3444455566788988887531 111111111111 13788898665
Q ss_pred CCCceEEEEecC-CCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCCCC
Q 026295 182 NQGSSFVLGFNS-DTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIGR 240 (240)
Q Consensus 182 ~~~~~l~~~~~d-d~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 240 (240)
.|..+... . +.|..++++... . ... ... .-...+.|+|+|+.++
T Consensus 133 ----~ly~~d~~~~----~~I~~~~~dG~~-~-~~~--~~~---~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 133 ----FMYWTDWGTP----AKIKKGGLNGVD-I-YSL--VTE---NIQWPNGITLDLLSGR 177 (316)
T ss_dssp ----EEEEEECSSS----CEEEEEETTSCC-E-EEE--ECS---SCSCEEEEEEETTTTE
T ss_pred ----EEEEEccCCC----CeEEEEcCCCCC-e-EEE--EEC---CCCCceEEEEeccCCE
Confidence 44444432 1 456666654322 1 111 111 1125688999987653
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.61 E-value=0.16 Score=38.92 Aligned_cols=159 Identities=4% Similarity=-0.166 Sum_probs=85.2
Q ss_pred ceEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQR-LATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
....++|++.+.. +.+-...+.|..+++..... .+. .+...-.....+++.+. .+.++++-...+.|.++++..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~--~~~--~~~~~l~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--VQN--VVVSGLLSPDGLACDWL-GEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC--CCE--EEEECCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc--eEE--EEcCCCCCccEEEEEcC-CCeEEEEECCCCEEEEEECCC
Confidence 3567888885544 44444567888888764311 011 11111234557788764 144555545567888888754
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe--CCCcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY--SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
. .....+.........++++| .+..|.... ..+.|...++.. .....+.... .
T Consensus 111 ~-------~~~~l~~~~~~~P~giavdp--~~g~ly~td~~~~~~I~r~~~dG-------~~~~~~~~~~---------l 165 (318)
T 3sov_A 111 S-------LRKVLFWQELDQPRAIALDP--SSGFMYWTDWGEVPKIERAGMDG-------SSRFIIINSE---------I 165 (318)
T ss_dssp C-------SCEEEECSSCSSEEEEEEEG--GGTEEEEEECSSSCEEEEEETTS-------CSCEEEECSS---------C
T ss_pred C-------cEEEEEeCCCCCccEEEEeC--CCCEEEEEecCCCCEEEEEEcCC-------CCeEEEEECC---------C
Confidence 2 11111222334568899988 554454444 246676666542 1111111110 0
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
...+.++|+|+.. .|..+.... +.|..++++.
T Consensus 166 ~~Pnglavd~~~~-----~lY~aD~~~----~~I~~~d~dG 197 (318)
T 3sov_A 166 YWPNGLTLDYEEQ-----KLYWADAKL----NFIHKSNLDG 197 (318)
T ss_dssp SCEEEEEEETTTT-----EEEEEETTT----TEEEEEETTS
T ss_pred CCccEEEEeccCC-----EEEEEECCC----CEEEEEcCCC
Confidence 1124899998765 455554432 7888888764
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.54 E-value=0.098 Score=43.69 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=21.1
Q ss_pred eEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 186 SFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 186 ~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
++.+|+.| +.++.||..+++..|..
T Consensus 499 lvf~g~~d-----g~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 499 LVFTGTGD-----GYFKAFDAKSGKELWKF 523 (582)
T ss_dssp EEEEECTT-----SEEEEEETTTCCEEEEE
T ss_pred EEEEECCC-----CcEEEEECCCCCEEEEe
Confidence 67778887 99999999998877765
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.52 E-value=0.067 Score=44.57 Aligned_cols=61 Identities=13% Similarity=-0.054 Sum_probs=36.7
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
++.|..||..++ +.+-.+... ..+....+.. .+..++.++.||.|+.+|.++ ++.+.++..
T Consensus 443 ~g~l~a~D~~tG-------~~~W~~~~~-~~~~~~~~~t--~gg~v~~g~~dg~l~a~D~~t------G~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTG-------KAKWTKWEK-FAAWGGTLYT--KGGLVWYATLDGYLKALDNKD------GKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTC-------CEEEEEEES-SCCCSBCEEE--TTTEEEEECTTSEEEEEETTT------CCEEEEEEC
T ss_pred CCeEEEEECCCC-------CEEEEecCC-CCccceeEEE--CCCEEEEEcCCCeEEEEECCC------CCEEEEEeC
Confidence 467777777655 443333322 2222233333 455677789999999999987 555555543
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.50 E-value=0.19 Score=42.17 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=42.9
Q ss_pred EEEECCCCCEEEEEeCCC----------------cEEEEeCCCCCCCcEEEEeEeee--cC--------ccEEEEEEc-C
Q 026295 14 SSSWNYCGQRLATGSTDG----------------TLSIFDSPDPSSSSFTCNLKTKV--HA--------GAILKVVWV-P 66 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d~----------------~i~iw~~~~~~~~~~~~~~~~~~--h~--------~~v~~~~~~-~ 66 (240)
.++++++..++..+..++ .|.-+|.. +++.+-.++. |. .++. +... .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~-----TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~ 318 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD-----TGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK 318 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT-----TCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC-----CCceeeEeecCCCccccccCCCccEE-Eecccc
Confidence 356667777777776553 67788887 5555555542 21 1222 2221 3
Q ss_pred CCCC---CEEEEEecCCeEEEEEeeec
Q 026295 67 PEFG---DAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 67 ~~~~---~~l~s~~~d~~v~iwd~~~~ 90 (240)
+ | ..++.++.+|.+.++|..++
T Consensus 319 ~--G~~~~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 319 D--GKARKLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp T--SCEEEEEEEECTTSEEEEEETTTC
T ss_pred C--CcEEEEEEEECCCcEEEEEECCCC
Confidence 4 6 46777889999999998665
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.44 E-value=0.093 Score=43.84 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=35.8
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
++.|..||+.++ +.+-..... ..+..-.... .+..++.++.||.++.||.++ ++.+-++..
T Consensus 465 ~G~l~A~D~~tG-------~~~W~~~~~-~~~~~g~~~t--agglvf~g~~dg~l~A~D~~t------G~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSG-------KVVWEHKEH-LPLWAGVLAT--AGNLVFTGTGDGYFKAFDAKS------GKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTC-------CEEEEEEES-SCCCSCCEEE--TTTEEEEECTTSEEEEEETTT------CCEEEEEEC
T ss_pred cceEEEEECCCC-------CEEEEecCC-CCCcccceEe--CCCEEEEECCCCcEEEEECCC------CCEEEEecC
Confidence 466777777655 333333322 1222212222 455677899999999999988 555555544
No 285
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.43 E-value=0.14 Score=43.55 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=40.3
Q ss_pred CCeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeec
Q 026295 79 DGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQN 155 (240)
Q Consensus 79 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 155 (240)
++.|..||+.++ +.+-..... .......+.. .+.++++++.||.++.||.++ ++.+..+..
T Consensus 437 ~g~l~A~D~~tG-------~~~W~~~~~-~~~~~~~~~t--~gg~vf~g~~dg~l~a~d~~t------G~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQ-------KAAWKVPYP-THWNGGTLST--AGNLVFQGTAAGQMHAYSADK------GEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTT-------EEEEEEEES-SSCCCCEEEE--TTTEEEEECTTSEEEEEETTT------CCEEEEEEC
T ss_pred cceEEEEeCCCC-------cEEEEccCC-CCCcCceeEe--CCCEEEEECCcccchhhhhhc------ChhheEecC
Confidence 367888888766 544444432 2233344555 677788899999999999987 555555543
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.42 E-value=0.41 Score=41.47 Aligned_cols=187 Identities=12% Similarity=0.042 Sum_probs=101.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee------ecCccEEEEEEcCCCCCCEEEEEecCCeEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK------VHAGAILKVVWVPPEFGDAVACICSDGSLL 83 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 83 (240)
..|.++..+++|++-+ |+.++-|..|+.... .......-. .....|.++...++ +.+|..|+.++-|.
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~~lWigt~~~Gl~ 430 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQ---RFTSYTLQEDESARGIGSNNIKAVYVDEK--KSLVYIGTHAGGLS 430 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTTC---CEEEECCC------CCSCSCEEEEEEETT--TTEEEEEETTTEEE
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCCC---cEEEEecCCCCcccCCCCccEEEEEEcCC--CCEEEEEeCcCcee
Confidence 4689999999887554 666667888887632 222221100 11356889988777 77456667767788
Q ss_pred EEEeeeccCCCcccEEEEEee-----eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE-----STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
++|...+ + ...+. .....|.++...+ ++. |..|+.+| +.+|+..+ .+.. .+.....
T Consensus 431 ~~d~~~~-------~-~~~~~~~~~~l~~~~v~~i~~d~--~g~-lwigt~~G-l~~~~~~~------~~~~-~~~~~~~ 491 (795)
T 4a2l_A 431 ILHRNSG-------Q-VENFNQRNSQLVNENVYAILPDG--EGN-LWLGTLSA-LVRFNPEQ------RSFT-TIEKEKD 491 (795)
T ss_dssp EEETTTC-------C-EEEECTTTSCCSCSCEEEEEECS--SSC-EEEEESSC-EEEEETTT------TEEE-ECCBCTT
T ss_pred EEeCCCC-------c-EEEeecCCCCcCCCeeEEEEECC--CCC-EEEEecCc-eeEEeCCC------CeEE-Ecccccc
Confidence 8887653 2 22221 1235688888766 777 55555544 88888765 1211 1111000
Q ss_pred eeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecCC
Q 026295 159 SVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 238 (240)
Q Consensus 159 ~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 238 (240)
+.+.....+.++...+++. |-+|.. +-|..|+..+... ..........-....|.++...+++
T Consensus 492 ---~~~~~~~~i~~i~~d~~g~------lWigt~------~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g 554 (795)
T 4a2l_A 492 ---GTPVVSKQITTLFRDSHKR------LWIGGE------EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNG 554 (795)
T ss_dssp ---CCBCCCCCEEEEEECTTCC------EEEEES------SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTS
T ss_pred ---ccccCCceEEEEEECCCCC------EEEEeC------CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCC
Confidence 0000011233777777774 555554 3477788765431 1100000001123467888777765
No 287
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.38 E-value=0.12 Score=41.13 Aligned_cols=121 Identities=13% Similarity=0.247 Sum_probs=76.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---CC-----cEEEEeEeee------cCccEEEEEEcCCC-CCCEEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPS---SS-----SFTCNLKTKV------HAGAILKVVWVPPE-FGDAVAC 75 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~-----~~~~~~~~~~------h~~~v~~~~~~~~~-~~~~l~s 75 (240)
.|..+..+|+|++||..+. ..|.|-.+..+. .+ ..+ ...+.- ...+|..+.|+|-. .+..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 5778999999999999876 588888886321 00 011 122321 24679999999872 1357888
Q ss_pred EecCCeEEEEEeeeccCCCcccEE---EEEeeeccccEEeEEEeecCCCcEEEEEe--CCCcEEE
Q 026295 76 ICSDGSLLLWEEIVEDAQPLQWKL---CKSFESTSTQVLDVQFGVSSTSLKLVAAY--SDGHVKV 135 (240)
Q Consensus 76 ~~~d~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~i 135 (240)
-..|+.|++||+......+...+. ...+......|.+++|.. ++..|...+ ..|.|.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~--~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK--DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT--TSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC--CCcEEEEEecCCCCCEEE
Confidence 899999999999763221110000 011112336788999987 776666644 7777643
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.31 E-value=0.31 Score=38.87 Aligned_cols=115 Identities=11% Similarity=0.141 Sum_probs=70.5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee--cCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeecc-CCC-
Q 026295 19 YCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV--HAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVED-AQP- 94 (240)
Q Consensus 19 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~- 94 (240)
.+|..++.+-. +.||.-++.... ..+.+. +.. .-..|..+..+|+ |.+|+..+ +..|.|-.+..+. ...
T Consensus 30 ~n~t~i~~a~~-n~iR~~~i~~~~--~Yk~L~-~~~~i~f~~i~qlvlSps--G~lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 30 QNGTRIVFIQD-NIIRWYNVLTDS--LYHSLN-FSRHLVLDDTFHVISSTS--GDLLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp TTTTEEEEEET-TEEEEEETTTCS--SCEEEE-CTTTCCCCTTCEEEECTT--SSEEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred cCCCEEEEEEC-CEEEEEECCCCC--cceEEe-cCcccccCceeEEEECCC--CCEEEEec-CCeEEEEEecCccccCcc
Confidence 34555555433 567776765321 222221 211 1235778999999 99998875 5688888876221 110
Q ss_pred ----cccEEEEEeee------ccccEEeEEEeec-CCCcEEEEEeCCCcEEEEEecCc
Q 026295 95 ----LQWKLCKSFES------TSTQVLDVQFGVS-STSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 95 ----~~~~~~~~~~~------~~~~v~~~~~~~~-~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
...+ .+.+.- ....|..+.|+|- ..+..|++-..|++|++||+...
T Consensus 103 ~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 103 VSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp HHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 1112 233332 2467999999983 23457999999999999999863
No 289
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.28 E-value=0.23 Score=37.59 Aligned_cols=109 Identities=10% Similarity=0.032 Sum_probs=59.0
Q ss_pred EECCCCCEEEEEeC-----C------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-----
Q 026295 16 SWNYCGQRLATGST-----D------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD----- 79 (240)
Q Consensus 16 ~~s~~~~~l~~~~~-----d------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----- 79 (240)
....+++.++.|+. . ..+.+||.... +|+.+..+.........+.+ + +.+++.|+.+
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~ 113 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS---EWLGMPPLPSPRCLFGLGEA--L--NSIYVVGGREIKDGE 113 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT---EEEECCCBSSCEESCEEEEE--T--TEEEEECCEESSTTC
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCC---eEEECCCCCcchhceeEEEE--C--CEEEEEeCCcCCCCC
Confidence 33457778888873 1 12667887643 56555443321111112222 3 5666666632
Q ss_pred ---CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC-C-----CcEEEEEecC
Q 026295 80 ---GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS-D-----GHVKVYELLD 140 (240)
Q Consensus 80 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d-----g~v~iw~~~~ 140 (240)
..+.+||..+ ..|..+..+.........+. . ++.+++.|+. + ..+.+||+.+
T Consensus 114 ~~~~~~~~~d~~~-----~~W~~~~~~p~~r~~~~~~~--~--~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 114 RCLDSVMCYDRLS-----FKWGESDPLPYVVYGHTVLS--H--MDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp CBCCCEEEEETTT-----TEEEECCCCSSCCBSCEEEE--E--TTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred cccceEEEECCCC-----CcEeECCCCCCcccceeEEE--E--CCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 3577777754 35676655544333333333 2 6677777775 2 3588888875
No 290
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.28 E-value=0.07 Score=40.41 Aligned_cols=159 Identities=18% Similarity=0.195 Sum_probs=81.1
Q ss_pred CCCEEEEEeC----C-----CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC-----CeEEEE
Q 026295 20 CGQRLATGST----D-----GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD-----GSLLLW 85 (240)
Q Consensus 20 ~~~~l~~~~~----d-----~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~iw 85 (240)
++++++.|+. + ..+.+||+... +++.+..+.........+.+ + +.+++.|+.+ ..+.+|
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~y 142 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN---QWSPCAPMSVPRNRIGVGVI--D--GHIYAVGGSHGCIHHNSVERY 142 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTT---EEEECCCCSSCCBTCEEEEE--T--TEEEEECCEETTEECCCEEEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCC---eEeECCCCCcCccccEEEEE--C--CEEEEEcCCCCCcccccEEEE
Confidence 5666777665 2 45788888744 66665544322222222222 4 5666666543 356677
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEeeeeccccee
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQAEFQNAIDSV 160 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~v 160 (240)
|..+ ..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+..+....
T Consensus 143 d~~~-----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r--- 206 (308)
T 1zgk_A 143 EPER-----DEWHLVAPMLTRRIGVGVAVL----NRLLYAVGGFDGTNRLNSAECYYPER----NEWRMITAMNTIR--- 206 (308)
T ss_dssp ETTT-----TEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCCCEEEEETTT----TEEEECCCCSSCC---
T ss_pred CCCC-----CeEeECCCCCccccceEEEEE----CCEEEEEeCCCCCCcCceEEEEeCCC----CeEeeCCCCCCcc---
Confidence 7654 356665554433333233333 56777777654 4578888765 2355443221110
Q ss_pred eccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeE
Q 026295 161 TMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVA 217 (240)
Q Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~ 217 (240)
... ..+.+ ++. +++.|+.++......+.+||+.+. .|....
T Consensus 207 -----~~~--~~~~~--~~~-----iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~ 247 (308)
T 1zgk_A 207 -----SGA--GVCVL--HNC-----IYAAGGYDGQDQLNSVERYDVETE--TWTFVA 247 (308)
T ss_dssp -----BSC--EEEEE--TTE-----EEEECCBCSSSBCCCEEEEETTTT--EEEECC
T ss_pred -----ccc--eEEEE--CCE-----EEEEeCCCCCCccceEEEEeCCCC--cEEECC
Confidence 001 02222 232 777777653222356777776553 354443
No 291
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.24 E-value=0.2 Score=37.97 Aligned_cols=108 Identities=9% Similarity=0.028 Sum_probs=57.1
Q ss_pred ECCCCCEEEEEeC----CC-------cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC------
Q 026295 17 WNYCGQRLATGST----DG-------TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD------ 79 (240)
Q Consensus 17 ~s~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------ 79 (240)
...++..++.|+. ++ .+.+||.... +|..+..+.........+.+ + +.+++.|+.+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~ 125 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS---EWVGLPPLPSARCLFGLGEV--D--DKIYVVAGKDLQTEAS 125 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTT---EEEECSCBSSCBCSCEEEEE--T--TEEEEEEEEBTTTCCE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCC---cEEECCCCCccccccceEEE--C--CEEEEEcCccCCCCcc
Confidence 3456777777773 12 1667887643 66655444321111222222 4 5666777653
Q ss_pred -CeEEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC------CCcEEEEEecC
Q 026295 80 -GSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS------DGHVKVYELLD 140 (240)
Q Consensus 80 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------dg~v~iw~~~~ 140 (240)
..+.+||... ..|..+..+.........+. . ++.+++.|+. -..+.+||+.+
T Consensus 126 ~~~~~~yd~~~-----~~W~~~~~~p~~r~~~~~~~--~--~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 126 LDSVLCYDPVA-----AKWSEVKNLPIKVYGHNVIS--H--NGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EEEEEEEETTT-----TEEEEECCCSSCEESCEEEE--E--TTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred cceEEEEeCCC-----CCEeECCCCCCcccccEEEE--E--CCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 2356666644 45776655443322222222 3 6776777763 23588888876
No 292
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.22 E-value=0.36 Score=38.93 Aligned_cols=114 Identities=9% Similarity=-0.049 Sum_probs=60.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee------cCccEEEEEEcCC--CCCCEEEEEec----
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV------HAGAILKVVWVPP--EFGDAVACICS---- 78 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~--~~~~~l~s~~~---- 78 (240)
.-+.++|.|+|+++++-...+.|++++.... ....+..+.. -.+....|+|+|+ ..+.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g---~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESG---SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCC---cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 4578999999987777544456888775421 2233333321 2456789999983 01554444432
Q ss_pred --------CCeEEEEEeeeccCCCcccEEEE-Eeee-ccccEEeEEEeecCCCcEEEEEeC
Q 026295 79 --------DGSLLLWEEIVEDAQPLQWKLCK-SFES-TSTQVLDVQFGVSSTSLKLVAAYS 129 (240)
Q Consensus 79 --------d~~v~iwd~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~~l~~~~~ 129 (240)
...|.-+++...+......+.+. .+.. .......|.|.| +|.+.++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p--DG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP--DQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT--TSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC--CCeEEEEECC
Confidence 12444454432211000112222 2221 224568899998 8886665543
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.18 E-value=0.077 Score=44.95 Aligned_cols=120 Identities=11% Similarity=0.064 Sum_probs=71.3
Q ss_pred EEEEcC-CCCCCEEEEEecCC-----------eEEEEEeeeccCCCcccEEEEEeeecc-ccEEeEEEeecCCCcEEEEE
Q 026295 61 KVVWVP-PEFGDAVACICSDG-----------SLLLWEEIVEDAQPLQWKLCKSFESTS-TQVLDVQFGVSSTSLKLVAA 127 (240)
Q Consensus 61 ~~~~~~-~~~~~~l~s~~~d~-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~ 127 (240)
..++.+ + +++++.|+.+. .+.+||...+ .|..+..+.... ....++++.+ ++.+++.|
T Consensus 190 ~~av~~~~--g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-----~w~~~~~~~~~~~~~~~~~~~~~--~g~lyv~G 260 (656)
T 1k3i_A 190 AAAIEPTS--GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-----IVSDRTVTVTKHDMFCPGISMDG--NGQIVVTG 260 (656)
T ss_dssp EEEEETTT--TEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-----CBCCCEEEECSCCCSSCEEEECT--TSCEEEEC
T ss_pred eEEEEecC--CEEEEEecccccccccCCCCeEEEEEEeCCCC-----cEEeCcccCCCCCCccccccCCC--CCCEEEeC
Confidence 455666 6 78888877543 5778887653 456555554322 2334466666 88888888
Q ss_pred e-CCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEec-CCCCCCCeEEEEE
Q 026295 128 Y-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFN-SDTPQLNSSKVWE 205 (240)
Q Consensus 128 ~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~-dd~~~~~~i~iw~ 205 (240)
+ .+..+.+||+.+ ..|.....+..... .. ++...+++. +++.|+. +.......+.+||
T Consensus 261 G~~~~~v~~yd~~t----~~W~~~~~~~~~R~--------~~---s~~~~~dg~-----iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 261 GNDAKKTSLYDSSS----DSWIPGPDMQVARG--------YQ---SSATMSDGR-----VFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SSSTTCEEEEEGGG----TEEEECCCCSSCCS--------SC---EEEECTTSC-----EEEECCCCCSSSCCCCEEEEE
T ss_pred CCCCCceEEecCcC----CceeECCCCCcccc--------cc---ceEEecCCe-----EEEEeCcccCCcccccceEeC
Confidence 8 445799999876 23554432221110 01 445556665 8888883 3222235788888
Q ss_pred eecC
Q 026295 206 FDEA 209 (240)
Q Consensus 206 ~~~~ 209 (240)
..+.
T Consensus 321 ~~t~ 324 (656)
T 1k3i_A 321 PSSK 324 (656)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7654
No 294
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.17 E-value=0.28 Score=37.13 Aligned_cols=112 Identities=10% Similarity=0.099 Sum_probs=62.0
Q ss_pred CCCEEEEEeCC--------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-C-----CeEEEE
Q 026295 20 CGQRLATGSTD--------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-D-----GSLLLW 85 (240)
Q Consensus 20 ~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d-----~~v~iw 85 (240)
+++.++.|+.+ ..+.+||.... +|+.+..+.........+. .+ +.+++.|+. + ..+.+|
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~~~~~~~~~~~~~y 170 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESDPLPYVVYGHTVLS--HM--DLVYVIGGKGSDRKCLNKMCVY 170 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEE--ET--TEEEEECCBCTTSCBCCCEEEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECCCCCCcccceeEEE--EC--CEEEEEeCCCCCCcccceEEEE
Confidence 55666666632 35888888744 6666654432222122222 23 566667665 2 357778
Q ss_pred EeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC-----cEEEEEecCcccccceeEEe
Q 026295 86 EEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG-----HVKVYELLDPLILKNWQLQA 151 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~ 151 (240)
|... ..|..+..+.........+.+ ++.+++.|+.++ .+.+||+.+ .+|..+.
T Consensus 171 d~~~-----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~ 228 (315)
T 4asc_A 171 DPKK-----FEWKELAPMQTARSLFGATVH----DGRIIVAAGVTDTGLTSSAEVYSITD----NKWAPFE 228 (315)
T ss_dssp ETTT-----TEEEECCCCSSCCBSCEEEEE----TTEEEEEEEECSSSEEEEEEEEETTT----TEEEEEC
T ss_pred eCCC-----CeEEECCCCCCchhceEEEEE----CCEEEEEeccCCCCccceEEEEECCC----CeEEECC
Confidence 7754 356766555433333333333 667777777654 477788765 2365543
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.01 E-value=0.11 Score=41.50 Aligned_cols=114 Identities=9% Similarity=0.065 Sum_probs=67.3
Q ss_pred cceEEEEECCCCCEEEEEeCC-C----cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcC-CCCCCEEEEEecCCeEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTD-G----TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVP-PEFGDAVACICSDGSLL 83 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d-~----~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~ 83 (240)
.....++|+++|++|..+... + .+.+++.... ......+.. ......+++.| + +.++++-..++.|.
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~----~~~~~~l~~-~~~p~giavdp~~--g~lyv~d~~~~~V~ 251 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG----FKVITELTK-GQNCNGAETHPIN--GELYFNSWNAGQVF 251 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT----SCSEEEEEE-CSSCCCEEECTTT--CCEEEEETTTTEEE
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc----eeeeeeecc-CCCceEEEEeCCC--CEEEEEECCCCEEE
Confidence 356789999999966666542 2 2333443321 110112221 23456788988 5 77666666678888
Q ss_pred EEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEE-EEEeCCCcEEEEEec
Q 026295 84 LWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKL-VAAYSDGHVKVYELL 139 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iw~~~ 139 (240)
.++.... ........ .......++|+| ++.+| ++-...+.|..++..
T Consensus 252 ~~~~~~~-------~~~~~~~~~~~~~P~gia~~p--dG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 252 RYDFTTQ-------ETTPLFTIQDSGWEFHIQFHP--SGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEETTTT-------EEEEEEECSSSSCCEEEEECT--TSSEEEEEETTTTEEEEEEEE
T ss_pred EEECCCC-------cEEEEEEcCCCCcceeEEEcC--CCCEEEEEECCCCEEEEEeCC
Confidence 8887643 22111111 123467899999 89844 444567888888875
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.94 E-value=0.49 Score=37.89 Aligned_cols=116 Identities=13% Similarity=0.079 Sum_probs=65.1
Q ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCCCcE-EEEeEeeecCccEEEEEEcCCCCCCEEEEE-ecCCeEEEEEee
Q 026295 12 TTSSSWNY-CGQRLATGSTDGTLSIFDSPDPSSSSF-TCNLKTKVHAGAILKVVWVPPEFGDAVACI-CSDGSLLLWEEI 88 (240)
Q Consensus 12 v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-~~d~~v~iwd~~ 88 (240)
...++++| +|.+.++-..++.|+.++.... .. ..+..... ...-..++|+|+ ++.|..+ ...+.|+.+++.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---~~~~~~~~~~~-~~~~~~ia~dpd--G~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATG---TLTEEEVMMDT-KGSNFHIVWHPT--GDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTC---CEEEEEEECSC-CSSCEEEEECTT--SSEEEEEETTTTEEEEEEBC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCC---eEEEEEeccCC-CCCcccEEEeCC--CCEEEEEeCCCCEEEEEeCC
Confidence 45688899 6666666666788888888622 21 11211111 122346999999 8855444 446788887765
Q ss_pred eccCCCcccEEEEEeee---------------ccccEEeEEE---------eecCCCcEEEEEeCCCcEEEEEe
Q 026295 89 VEDAQPLQWKLCKSFES---------------TSTQVLDVQF---------GVSSTSLKLVAAYSDGHVKVYEL 138 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---------------~~~~v~~~~~---------~~~~~~~~l~~~~~dg~v~iw~~ 138 (240)
..... +.....+.+ .-.....+++ .+ ++.++++-..++.|+.++.
T Consensus 304 ~~~~~---~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~--~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 304 RETGK---LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED--EYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTCC---BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC--CEEEEEEETTTTEEEEECT
T ss_pred CCCcc---cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC--CCcEEEEECCCCEEEEECC
Confidence 22110 000011111 0123466888 55 6776666667778888874
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.87 E-value=0.016 Score=49.55 Aligned_cols=162 Identities=6% Similarity=-0.117 Sum_probs=81.2
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
.+..++|++.+.+|.... ..+.|+.+++...... ......+.........|++.+. .+.++++-...+.|.+.++..
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-~~~~~~i~~~~~~P~glavD~~-~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-SSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--CCCCCBCCSCC--CCCEECCCS-SSBCEECCTTTSCEEEEBSSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-cceEEEEeCCCCCcceEEEEee-CCcEEEEeccCCeEEEEecCC
Confidence 456788988766665554 4578888888641000 0011111111122446777644 144444444567888888764
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe-C-CCcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY-S-DGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
. .....+.........|+++| .+.+|+... . .+.|..+++.. .....+.... +
T Consensus 485 ~-------~~~~l~~~~~~~P~giavDp--~~g~ly~td~~~~~~I~~~~~dG-------~~~~~l~~~~---------l 539 (699)
T 1n7d_A 485 V-------KRKTLFREQGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNG-------VDIYSLVTEN---------I 539 (699)
T ss_dssp C-------CEEEECCCSSCCCCCEECCS--SSSCCEECCCSSSCCEEBCCSSS-------CCCCEESCSS---------C
T ss_pred C-------ceEEEEeCCCCCcceEEEcc--CCCcEEEcccCCCCeEEEEeCCC-------CCeeEEEeCC---------C
Confidence 3 22222222223457788887 544444333 2 25666665542 1111111000 0
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
...+.|+|+|.+. .|..+.... +.|..+++..
T Consensus 540 ~~PnGlavd~~~~-----~LY~aD~~~----~~I~~~d~dG 571 (699)
T 1n7d_A 540 QWPNGITLDLLSG-----RLYWVDSKL----HSISSIDVNG 571 (699)
T ss_dssp SSCCCEEECTTTC-----CEEEEETTT----TEEEEECSSS
T ss_pred CCccEEEEeccCC-----EEEEEecCC----CeEEEEccCC
Confidence 1123799998865 344443322 7888888764
No 298
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.86 E-value=0.16 Score=36.66 Aligned_cols=109 Identities=8% Similarity=-0.057 Sum_probs=60.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCC----cEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSS----SFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWE 86 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd 86 (240)
.+..++|+|+|.+.+. .+|.+.-.+....... ....+-.. +... -.++.|.|+ |.+.++ .||.|.-++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~-F~a~~fD~~--G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-GWNQ-FQFLFFDPN--GYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-CGGG-CSEEEECTT--SCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-cccc-ceEEEECCC--CCEEEe--CCCEEEEeC
Confidence 5779999999987777 5676544443211100 11111110 1111 468889888 887777 578876665
Q ss_pred eeeccCCCcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeCCCcE
Q 026295 87 EIVEDAQPLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYSDGHV 133 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 133 (240)
-. +.....|.-..+.- ..=..+..|.|.| +|.+.++. |+.+
T Consensus 114 pP--~~~~~~Wl~~a~~vg~~gw~~~~~lff~p--~G~Lyav~--dg~l 156 (236)
T 1tl2_A 114 PP--QSDTDNWIARATEVGSGGWSGFKFLFFHP--NGYLYAVH--GQQF 156 (236)
T ss_dssp CC--CSTTCCHHHHSEEEECSSGGGEEEEEECT--TSCEEEEE--TTEE
T ss_pred CC--cCCCCceeccccEeccCCCCceEEEEECC--CceEEEEe--CCcE
Confidence 42 22223443221111 1124678899999 99855555 7774
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.86 E-value=0.58 Score=38.15 Aligned_cols=115 Identities=9% Similarity=0.107 Sum_probs=63.9
Q ss_pred ceEEEEECCC-C-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee---cCccEEEEEE-------cCCCCCCEEEEEec
Q 026295 11 GTTSSSWNYC-G-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV---HAGAILKVVW-------VPPEFGDAVACICS 78 (240)
Q Consensus 11 ~v~~~~~s~~-~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---h~~~v~~~~~-------~~~~~~~~l~s~~~ 78 (240)
....|+|+|. + +++++-...+.|++.|+... ........ .......|+| +++ +..|+.+..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-----~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-----MLSSPLNINTIPTNRIRSIAFNKKIEGYADE--AEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-----EEEEEECCTTSSCSBEEEEEECCCBTTTBCT--TCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-----EEEEEEccCccccCCCcEEEEeecccccCCC--CCEEEEEeC
Confidence 3568999983 4 44444444467888888743 22222211 1235789999 998 886666554
Q ss_pred CC-----e--EEEEEeeeccCCC---cccEEEEEeeeccccEEeEEEeecCCCcE-EEEEeCCCcEEEEEec
Q 026295 79 DG-----S--LLLWEEIVEDAQP---LQWKLCKSFESTSTQVLDVQFGVSSTSLK-LVAAYSDGHVKVYELL 139 (240)
Q Consensus 79 d~-----~--v~iwd~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~v~iw~~~ 139 (240)
.+ . |.+.+... ++.. ..+..+..+ .....++++| ++.. +++-..++.|..+|+.
T Consensus 213 ~~~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~~----~~p~giavdp--~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNA-DGTFDDRSDIQLIAAY----KQCNGATIHP--INGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCTTGGGEEEEEEEECCT-TSCCSTTSCEEEEEEE----SCCCCEEECT--TTCCEEEEETTTTEEEEECHH
T ss_pred CCCCcccCceEEEEecCC-CCceeecccceeeccC----CCceEEEEcC--CCCeEEEEECCCCEEEEEecc
Confidence 43 2 44444221 1110 001223222 2345778877 5444 4555577889999986
No 300
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.79 E-value=0.46 Score=36.59 Aligned_cols=88 Identities=11% Similarity=-0.026 Sum_probs=42.3
Q ss_pred CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec------CCeEEEEEeeeccCCCcccEEEEEee
Q 026295 31 GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS------DGSLLLWEEIVEDAQPLQWKLCKSFE 104 (240)
Q Consensus 31 ~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~ 104 (240)
..+.+||.... +|+.+..+..-...-.++... + +.+++.|+. ...+.+||+... ...|..+..+.
T Consensus 168 ~~v~~yd~~~~---~W~~~~~~p~~~~~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~~d~d~~---~~~W~~~~~~~ 238 (357)
T 2uvk_A 168 KFLLSFDPSTQ---QWSYAGESPWYGTAGAAVVNK-G--DKTWLINGEAKPGLRTDAVFELDFTGN---NLKWNKLAPVS 238 (357)
T ss_dssp CEEEEEETTTT---EEEEEEECSSCCCBSCEEEEE-T--TEEEEECCEEETTEECCCEEEEECC------CEEEECCCSS
T ss_pred ccEEEEeCCCC---cEEECCCCCCCCcccccEEEE-C--CEEEEEeeecCCCcccCceEEEEecCC---CCcEEecCCCC
Confidence 46888998754 777765544211111233332 3 566666653 234666765211 14566655543
Q ss_pred eccccEEeEEEeecCCCcEEEEEeC
Q 026295 105 STSTQVLDVQFGVSSTSLKLVAAYS 129 (240)
Q Consensus 105 ~~~~~v~~~~~~~~~~~~~l~~~~~ 129 (240)
.........+... ++.+++.|+.
T Consensus 239 ~~~~~~~~~~~~~--~~~iyv~GG~ 261 (357)
T 2uvk_A 239 SPDGVAGGFAGIS--NDSLIFAGGA 261 (357)
T ss_dssp TTTCCBSCEEEEE--TTEEEEECCE
T ss_pred CCcccccceEEEE--CCEEEEEcCc
Confidence 2222212112223 6677777763
No 301
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.73 E-value=0.26 Score=37.35 Aligned_cols=112 Identities=9% Similarity=0.138 Sum_probs=59.8
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecC------CeEEEEE
Q 026295 20 CGQRLATGSTD-------GTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSD------GSLLLWE 86 (240)
Q Consensus 20 ~~~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------~~v~iwd 86 (240)
+++.++.|+.+ ..+.+||.... +|+.+..+......- ++.. .+ +.+++.|+.+ ..+.+||
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~-~~~~-~~--~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAA---KWSEVKNLPIKVYGH-NVIS-HN--GMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTT---EEEEECCCSSCEESC-EEEE-ET--TEEEEECCEESSSCBCCCEEEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCC---CEeECCCCCCccccc-EEEE-EC--CEEEEEcCCCCCCCccceEEEEc
Confidence 56667777653 24777887644 676654433211111 2222 23 5666666542 3577888
Q ss_pred eeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCC-----CcEEEEEecCcccccceeEEe
Q 026295 87 EIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSD-----GHVKVYELLDPLILKNWQLQA 151 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~ 151 (240)
+.+ ..|..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+ .+|..+.
T Consensus 182 ~~~-----~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~ 238 (318)
T 2woz_A 182 PKK-----GDWKDLAPMKTPRSMFGVAIH----KGKIVIAGGVTEDGLSASVEAFDLKT----NKWEVMT 238 (318)
T ss_dssp TTT-----TEEEEECCCSSCCBSCEEEEE----TTEEEEEEEEETTEEEEEEEEEETTT----CCEEECC
T ss_pred CCC-----CEEEECCCCCCCcccceEEEE----CCEEEEEcCcCCCCccceEEEEECCC----CeEEECC
Confidence 765 357766554433333233333 66777777643 2466777765 3365543
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.63 E-value=0.24 Score=38.07 Aligned_cols=117 Identities=11% Similarity=0.086 Sum_probs=73.1
Q ss_pred eEEEEE---CCCCCEEEEEe-------------CCCcEEEEeCCCCCCCcEEEEeEeeec-----------CccEEEEEE
Q 026295 12 TTSSSW---NYCGQRLATGS-------------TDGTLSIFDSPDPSSSSFTCNLKTKVH-----------AGAILKVVW 64 (240)
Q Consensus 12 v~~~~~---s~~~~~l~~~~-------------~d~~i~iw~~~~~~~~~~~~~~~~~~h-----------~~~v~~~~~ 64 (240)
+..+.| +|+++++++.. .+..|..||+.....+.......+... -....+++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578999 68887777644 257788999871110011111122111 124789999
Q ss_pred cCCCCCCEEEEEecC-CeEEEEEeeeccCCCcccEEEEEe------eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEE
Q 026295 65 VPPEFGDAVACICSD-GSLLLWEEIVEDAQPLQWKLCKSF------ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYE 137 (240)
Q Consensus 65 ~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~ 137 (240)
.++ |+..++.+.- +.|...+... +.+..+ .......+.|+++| ++..|++....|.+.-+|
T Consensus 145 D~~--GnaYVt~s~~~~~I~rV~pdG--------~~~~~~~~~~~~~~~~~G~nGIv~~p--dg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 145 DRD--GNSYVAFALGMPAIARVSADG--------KTVSTFAWESGNGGQRPGYSGITFDP--HSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp CTT--SCEEEEEEESSCEEEEECTTS--------CCEEEEEECCCCSSSCCSCSEEEEET--TTTEEEEESSSSSEEEEE
T ss_pred CCC--CCEEEeCCCCCCeEEEEeCCC--------CEEeeeeecCCCcccccCcceEEEeC--CCCEEEEEcCCCeEEEEc
Confidence 888 9988887777 6655555432 111111 11223466899999 998888887799999999
Q ss_pred ecC
Q 026295 138 LLD 140 (240)
Q Consensus 138 ~~~ 140 (240)
+..
T Consensus 213 ~~~ 215 (334)
T 2p9w_A 213 VSK 215 (334)
T ss_dssp CSS
T ss_pred CCC
Confidence 874
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.63 E-value=0.57 Score=36.43 Aligned_cols=165 Identities=8% Similarity=-0.018 Sum_probs=89.1
Q ss_pred ceEEEEECCCCCEEEEEe------------CCCcEEEEeCCCCCCCcEEEEeEeee-----cCccEEEEEEcCCCCCC--
Q 026295 11 GTTSSSWNYCGQRLATGS------------TDGTLSIFDSPDPSSSSFTCNLKTKV-----HAGAILKVVWVPPEFGD-- 71 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~------------~d~~i~iw~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~-- 71 (240)
....+...|+|..+++++ .+|.|.++|..+... +.+.+ .+.+ ..-....+.+.++..+.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~-~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP-AVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC-CEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC-ceEEE-EccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 445677888886555542 689999999874321 22222 2222 22356677765521243
Q ss_pred EEEEEec--CCeEEEEEeeeccCCCcccEEEEEeeec-cccEEeEEEeecCCCcEEEEEe---CC------------CcE
Q 026295 72 AVACICS--DGSLLLWEEIVEDAQPLQWKLCKSFEST-STQVLDVQFGVSSTSLKLVAAY---SD------------GHV 133 (240)
Q Consensus 72 ~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~---~d------------g~v 133 (240)
++++-.. +.+|.+|++..... ....+..+.+. -...+.+.+.+ +|.+.++.. .| ..-
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~---~~~~~~~~~g~~~~~pND~~v~~--~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEK---SLLHLKTIRHKLLPSVNDIVAVG--PEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTT---EEEEEEEECCTTCSSEEEEEEEE--TTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred EEEEECCCCCCeEEEEEEECCCC---EEEEEeccccCCCCCCceEEEeC--CCCEEecCCcEeCCcccccchhhccCCcc
Confidence 3444333 45788988865321 22344445432 24567899988 888666543 11 122
Q ss_pred EEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 134 KVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 134 ~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.+|.+... +.... .. .....|.++|+|++. .|.++.... +.|..|++..
T Consensus 204 ~vyr~d~~----~~~~~--~~-----------~l~~pNGia~spDg~-----~lYvadt~~----~~I~~~~~~~ 252 (355)
T 3sre_A 204 FVTYYSPN----DVRVV--AE-----------GFDFANGINISPDGK-----YVYIAELLA----HKIHVYEKHA 252 (355)
T ss_dssp EEEEECTT----CCEEE--EE-----------EESSEEEEEECTTSS-----EEEEEEGGG----TEEEEEEECT
T ss_pred EEEEEECC----eEEEe--ec-----------CCcccCcceECCCCC-----EEEEEeCCC----CeEEEEEECC
Confidence 33333220 01111 00 111235899999986 565555432 8999999874
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.62 E-value=0.31 Score=37.83 Aligned_cols=113 Identities=8% Similarity=-0.045 Sum_probs=56.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe----eecCccEEEEEEcCC--CCCCEEEEEec------
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT----KVHAGAILKVVWVPP--EFGDAVACICS------ 78 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~--~~~~~l~s~~~------ 78 (240)
.-..|+|.|+|++|..+...|.|++++.... ..+.+..+ ....+....|+++|+ ..+.+.++-..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~---~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKG---LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTE---ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCc---eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4578999999983445566799999885421 00111111 112345789999883 11554444332
Q ss_pred -CCeEEEEEeeeccCCCcccEEEE-Eeee---ccccEEeEEEeecCCCcEEEEEe
Q 026295 79 -DGSLLLWEEIVEDAQPLQWKLCK-SFES---TSTQVLDVQFGVSSTSLKLVAAY 128 (240)
Q Consensus 79 -d~~v~iwd~~~~~~~~~~~~~~~-~~~~---~~~~v~~~~~~~~~~~~~l~~~~ 128 (240)
...|..+++..........+.+. .+.. ....-..+.|.| +|.++++.+
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p--dG~Lyv~~G 148 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG--KGYLFIALG 148 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS--SSEEEEEEC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC--CCcEEEEEC
Confidence 12455555532211000111111 1111 112246799999 887555543
No 305
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.43 E-value=0.41 Score=40.11 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=21.8
Q ss_pred CCcEEEEEeCCCcEEEEEecCcccccceeEEeeee
Q 026295 120 TSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQ 154 (240)
Q Consensus 120 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 154 (240)
.+..++.++.||.++.||.++ ++.+-+++
T Consensus 483 agg~vf~gt~dg~l~A~D~~t------G~~lW~~~ 511 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDT------GDLLWKFK 511 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTT------CCEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCC------CCEEEEee
Confidence 455677799999999999998 45555443
No 306
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.38 E-value=0.65 Score=35.44 Aligned_cols=113 Identities=8% Similarity=-0.130 Sum_probs=64.6
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec--CCeEEEEEe
Q 026295 11 GTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS--DGSLLLWEE 87 (240)
Q Consensus 11 ~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--d~~v~iwd~ 87 (240)
....+++++.+. +..+-...+.|.++++.... .+.+ +.........+++.|. +..++.+.. .+.|...++
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l--~~~~~~~P~giavdp~--~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---RKVL--FWQELDQPRAIALDPS--SGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE--ECSSCSSEEEEEEEGG--GTEEEEEECSSSCEEEEEET
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---EEEE--EeCCCCCccEEEEeCC--CCEEEEEecCCCCEEEEEEc
Confidence 345688887554 44444556789999887431 1211 1122345678999886 555555442 456666665
Q ss_pred eeccCCCcccEEEEEe-eeccccEEeEEEeecCCCcEEEEE-eCCCcEEEEEecC
Q 026295 88 IVEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSLKLVAA-YSDGHVKVYELLD 140 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iw~~~~ 140 (240)
... ....+ ...-.....++++| ++..|..+ +..+.|..+++..
T Consensus 153 dG~--------~~~~~~~~~l~~Pnglavd~--~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 153 DGS--------SRFIIINSEIYWPNGLTLDY--EEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp TSC--------SCEEEECSSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CCC--------CeEEEEECCCCCccEEEEec--cCCEEEEEECCCCEEEEEcCCC
Confidence 432 11111 12224557899987 55545444 4567788888753
No 307
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.33 E-value=1.3 Score=38.52 Aligned_cols=114 Identities=9% Similarity=-0.054 Sum_probs=67.1
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec--CCeEEEEEe
Q 026295 11 GTTSSSWNYCGQRLA-TGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS--DGSLLLWEE 87 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--d~~v~iwd~ 87 (240)
....|++++.++.|. +-...+.|.+.++... ..+.+ +.........|++.|. ...|+.... .+.|...++
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l--~~~~l~~P~gIaVDp~--~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTL--FRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEE--EECTTCCEEEEEEETT--TTEEEEEECSSSCEEEEEET
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEE--EeCCCCCcceEEEecC--CCCEEEecCCCCCeEEEEec
Confidence 456789988775444 4455688999998743 11111 2223345789999887 555555442 256777766
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEE-eCCCcEEEEEecC
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAA-YSDGHVKVYELLD 140 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iw~~~~ 140 (240)
... .....+...-.....|++++ ....|..+ ...+.|..+++..
T Consensus 545 dG~-------~~~~lv~~~l~~P~GLavD~--~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 545 NGV-------DIYSLVTENIQWPNGITLDL--LSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp TSC-------CEEEEECSSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CCC-------ceEEEEeCCCCCceEEEEec--CCCeEEEEeCCCCcEEEEecCC
Confidence 532 22222222335678899987 44444444 4556788887753
No 308
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.30 E-value=1.3 Score=38.36 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=68.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee--ecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK--VHAGAILKVVWVPPEFGDAVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~ 87 (240)
..|.++..+++|++|-.|..++-|.+|+.... ..+...... .....|.++...++ |.+.+.. .+ -+.+|+.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~---~~~~~~~~~~~l~~~~v~~i~~d~~--g~lwigt-~~-Gl~~~~~ 478 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG---QVENFNQRNSQLVNENVYAILPDGE--GNLWLGT-LS-ALVRFNP 478 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTC---CEEEECTTTSCCSCSCEEEEEECSS--SCEEEEE-SS-CEEEEET
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC---cEEEeecCCCCcCCCeeEEEEECCC--CCEEEEe-cC-ceeEEeC
Confidence 56889998888885666777667889988632 222211000 12456889988776 7755544 44 4777886
Q ss_pred eeccCCCcccEEEEEeee-------ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 88 IVEDAQPLQWKLCKSFES-------TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
..+ +. ..+.. ....|.++...+ +|. +..++. +-|..|+..+
T Consensus 479 ~~~-------~~-~~~~~~~~~~~~~~~~i~~i~~d~--~g~-lWigt~-~Gl~~~~~~~ 526 (795)
T 4a2l_A 479 EQR-------SF-TTIEKEKDGTPVVSKQITTLFRDS--HKR-LWIGGE-EGLSVFKQEG 526 (795)
T ss_dssp TTT-------EE-EECCBCTTCCBCCCCCEEEEEECT--TCC-EEEEES-SCEEEEEEET
T ss_pred CCC-------eE-EEccccccccccCCceEEEEEECC--CCC-EEEEeC-CceEEEeCCC
Confidence 543 22 22211 235688888866 777 445555 4588888765
No 309
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.76 E-value=1.2 Score=35.18 Aligned_cols=114 Identities=9% Similarity=-0.074 Sum_probs=66.5
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec--CCeEEEEEe
Q 026295 11 GTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS--DGSLLLWEE 87 (240)
Q Consensus 11 ~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--d~~v~iwd~ 87 (240)
....+++++.+. +..+-...+.|.+.++... ... ..+...-.....|++.|. +..|+.... .+.|...++
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~--~l~~~~~~~P~~iavdp~--~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRK--TLFRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEE--EEEECSSCCEEEEEEETT--TTEEEEEECSSSCCEEEEET
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceE--EEEeCCCCCcceEEEecc--cCeEEEEeCCCCCEEEEEeC
Confidence 456889988544 4445455678888888743 111 122222345788999886 555554432 356777766
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEE-eCCCcEEEEEecC
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAA-YSDGHVKVYELLD 140 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iw~~~~ 140 (240)
... .........-.....|+++| .+..|..+ ...+.|..+|+..
T Consensus 233 dG~-------~~~~~~~~~l~~P~glavd~--~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 233 NGV-------DIYSLVTENIQWPNGITLDL--LSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp TSC-------SCEEEECSSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CCC-------ccEEEEECCCCceEEEEEEe--CCCEEEEEECCCCEEEEEeCCC
Confidence 532 11111222235668899987 55555444 4567788888753
No 310
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.70 E-value=1.1 Score=34.67 Aligned_cols=149 Identities=10% Similarity=0.059 Sum_probs=86.7
Q ss_pred EEECC---CCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCC--CCC---EEEEEec---CCeEE
Q 026295 15 SSWNY---CGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPE--FGD---AVACICS---DGSLL 83 (240)
Q Consensus 15 ~~~s~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~---~l~s~~~---d~~v~ 83 (240)
+-.+| ...+++.....+-+.+||+.. +.+..+.. +.++.+..-|.. .|. ++++... +.+|+
T Consensus 31 vw~~~~dp~~s~ii~t~k~~gL~Vydl~G------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 31 IWLDPKTPQNSKLITTNKKSGLVVYSLDG------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp EECCSSCGGGCEEEEEETTTEEEEEETTS------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred EecCCCCCCccEEEEEcCCCCEEEEcCCC------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 44445 345677777778999999963 34555543 566666665530 022 3334443 47899
Q ss_pred EEEeeeccCCCcccEEEEEee-------eccccEEeEEE--eecCCCcEEEEEeCCCcEEEEEecCcccc-cceeEEeee
Q 026295 84 LWEEIVEDAQPLQWKLCKSFE-------STSTQVLDVQF--GVSSTSLKLVAAYSDGHVKVYELLDPLIL-KNWQLQAEF 153 (240)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~--~~~~~~~~l~~~~~dg~v~iw~~~~~~~~-~~~~~~~~~ 153 (240)
+|++.... ..+..+. .....+..+++ +|.....++++...+|.+..|++...... ...+++.+|
T Consensus 103 vf~iDp~~------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 103 IYAIDGKN------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp EEEECTTT------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEECCCC------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 99884221 1233331 11155667787 44212236888889999999998642111 234666666
Q ss_pred ecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecC
Q 026295 154 QNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNS 193 (240)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~d 193 (240)
.... .+. .+...+... .|.++-.+
T Consensus 177 ~lgs-q~E----------gcvvDd~~g-----~Lyv~eEd 200 (355)
T 3amr_A 177 KMNS-QTE----------GMAADDEYG-----RLYIAEED 200 (355)
T ss_dssp ECSS-CEE----------EEEEETTTT-----EEEEEETT
T ss_pred cCCC-Ccc----------eEEEcCCCC-----eEEEeccc
Confidence 5432 122 566777766 78888887
No 311
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.65 E-value=0.84 Score=38.99 Aligned_cols=109 Identities=14% Similarity=0.116 Sum_probs=63.4
Q ss_pred CCCEEEEEeCCC------cEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCC--eEEEEEeeecc
Q 026295 20 CGQRLATGSTDG------TLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDG--SLLLWEEIVED 91 (240)
Q Consensus 20 ~~~~l~~~~~d~------~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~ 91 (240)
+++.++.|+.++ .+.+||.... +|..+..+..-... .+.....+ +.+++.|+.++ .+.+||...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~---~W~~~~~~p~~R~~-h~~~~~~~--~~iyv~GG~~~~~~v~~yd~~t-- 522 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTR---EWSMIKSLSHTRFR-HSACSLPD--GNVLILGGVTEGPAMLLYNVTE-- 522 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTT---EEEECCCCSBCCBS-CEEEECTT--SCEEEECCBCSSCSEEEEETTT--
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCC---cEEECCCCCCCccc-ceEEEEcC--CEEEEECCCCCCCCEEEEECCC--
Confidence 677777777543 4778888744 67766544321111 22333235 78888887655 578888765
Q ss_pred CCCcccEEEEE---eeeccccEEeEEEeecCC-CcEEEEEeC--C-----CcEEEEEecCc
Q 026295 92 AQPLQWKLCKS---FESTSTQVLDVQFGVSST-SLKLVAAYS--D-----GHVKVYELLDP 141 (240)
Q Consensus 92 ~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~-~~~l~~~~~--d-----g~v~iw~~~~~ 141 (240)
..|..+.. ..........+.+.. + +.+++.|+. + ..+.+||+.+.
T Consensus 523 ---~~W~~~~~~g~~p~~r~~~~a~v~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 523 ---EIFKDVTPKDEFFQNSLVSAGLEFDP--VSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp ---TEEEECCCSSGGGGSCCBSCEEEEET--TTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred ---CceEEccCCCCCCCcccceeEEEEeC--CCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 35666554 222222223355543 3 667777765 2 35888998763
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.48 E-value=1.3 Score=34.31 Aligned_cols=72 Identities=11% Similarity=0.131 Sum_probs=43.3
Q ss_pred ccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEee---eccccEEeEEEeecCC---CcEEEEE-eC
Q 026295 57 GAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSST---SLKLVAA-YS 129 (240)
Q Consensus 57 ~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~---~~~l~~~-~~ 129 (240)
.....++|.|+ |.++++ ..++.|.+++ .+. ...+..+. ........|+|+| + +..|.++ ..
T Consensus 31 ~~P~~ia~~pd--G~l~V~-e~~g~I~~i~--~g~-----~~~~~~~~v~~~g~~~p~gia~~p--df~~~g~lYv~~~~ 98 (352)
T 2ism_A 31 EVPWALAFLPD--GGMLIA-ERPGRIRLFR--EGR-----LSTYAELSVYHRGESGLLGLALHP--RFPQEPYVYAYRTV 98 (352)
T ss_dssp SCEEEEEECTT--SCEEEE-ETTTEEEEEE--TTE-----EEEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEEE
T ss_pred CCceEEEEcCC--CeEEEE-eCCCeEEEEE--CCC-----ccEeecceEeecCCCCceeEEECC--CCCCCCEEEEEEec
Confidence 34678999999 886555 5668888887 221 12232222 2235678999988 6 3334333 32
Q ss_pred C-----CcEEEEEecC
Q 026295 130 D-----GHVKVYELLD 140 (240)
Q Consensus 130 d-----g~v~iw~~~~ 140 (240)
+ +.|..++...
T Consensus 99 ~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLG 114 (352)
T ss_dssp CTTSSEEEEEEEEECS
T ss_pred CCCCCccEEEEEEeCC
Confidence 2 5677777653
No 313
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.41 E-value=1.3 Score=34.05 Aligned_cols=97 Identities=6% Similarity=-0.059 Sum_probs=52.0
Q ss_pred CCCEEEEEeCC-CcEEEEeCCCCCCCcEEEEeEee-ecCccEEEEEEcCCCCCCEEEEEec-C---------CeEEEEEe
Q 026295 20 CGQRLATGSTD-GTLSIFDSPDPSSSSFTCNLKTK-VHAGAILKVVWVPPEFGDAVACICS-D---------GSLLLWEE 87 (240)
Q Consensus 20 ~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~-d---------~~v~iwd~ 87 (240)
+++.++.|+.+ ..+.+||+... ..+|..+..+. ........+.+ + +.+++.|+. + ..+.+||.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~-~~~W~~~~~~p~~~R~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAK-DKKWTALAAFPGGPRDQATSAFI--D--GNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSS-SCCEEECCCCTTCCCBSCEEEEE--T--TEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCcCCCeEEEEccccC-CCCeeECCCCCCCcCccceEEEE--C--CEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 56666776644 46888888531 01677665544 11111222222 3 566666665 2 35677777
Q ss_pred eeccCCCcccEEEEEee-eccccEEeEEEeecCCCcEEEEEeCC
Q 026295 88 IVEDAQPLQWKLCKSFE-STSTQVLDVQFGVSSTSLKLVAAYSD 130 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d 130 (240)
.. ..|..+..+. ........+. . ++.+++.|+.+
T Consensus 94 ~~-----~~W~~~~~~~p~~r~~~~~~~--~--~~~iyv~GG~~ 128 (357)
T 2uvk_A 94 KT-----NSWVKLMSHAPMGMAGHVTFV--H--NGKAYVTGGVN 128 (357)
T ss_dssp TT-----TEEEECSCCCSSCCSSEEEEE--E--TTEEEEEECCC
T ss_pred CC-----CcEEECCCCCCcccccceEEE--E--CCEEEEEeCcC
Confidence 54 4566665554 2222222233 3 77878888754
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.31 E-value=0.12 Score=44.21 Aligned_cols=112 Identities=9% Similarity=-0.105 Sum_probs=60.8
Q ss_pred eEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec--CCeEEEEEee
Q 026295 12 TTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS--DGSLLLWEEI 88 (240)
Q Consensus 12 v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--d~~v~iwd~~ 88 (240)
...|++++.+ +++++-...+.|.++++... ..+. .+.........|++.|. +..|+.+.. .+.|...++.
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~--l~~~~~~~P~giavDp~--~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKT--LFREQGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEE--ECCCSSCCCCCEECCSS--SSCCEECCCSSSCCEEBCCSS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEE--EEeCCCCCcceEEEccC--CCcEEEcccCCCCeEEEEeCC
Confidence 4567888654 44444455678999988642 1111 12222234567888876 444443332 2567666654
Q ss_pred eccCCCcccEEEEEe-eeccccEEeEEEeecCCCc-EEEEEeCCCcEEEEEecC
Q 026295 89 VEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSL-KLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iw~~~~ 140 (240)
.. ....+ ...-.....|+|+| ++. ++++-...+.|..+++..
T Consensus 528 G~--------~~~~l~~~~l~~PnGlavd~--~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 528 GV--------DIYSLVTENIQWPNGITLDL--LSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SC--------CCCEESCSSCSSCCCEEECT--TTCCEEEEETTTTEEEEECSSS
T ss_pred CC--------CeeEEEeCCCCCccEEEEec--cCCEEEEEecCCCeEEEEccCC
Confidence 32 11111 11223456899987 544 444445667888888753
No 315
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.24 E-value=1.9 Score=35.23 Aligned_cols=146 Identities=10% Similarity=0.157 Sum_probs=75.2
Q ss_pred EEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeee---ccccEEeEEE-------eecCCCcEEEEEe
Q 026295 59 ILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFES---TSTQVLDVQF-------GVSSTSLKLVAAY 128 (240)
Q Consensus 59 v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~~~l~~~~ 128 (240)
...|+|.|...++++++-...+.|++.|+..+ ........ .......++| ++ ++..|+++.
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-------~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~lyvad 211 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-------MLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAI 211 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT-------EEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC-------EEEEEEccCccccCCCcEEEEeecccccCC--CCCEEEEEe
Confidence 45788887211444444443456777777653 22222222 1235788999 99 888666665
Q ss_pred CCC-c------EEEEEecCcccccc---eeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCC
Q 026295 129 SDG-H------VKVYELLDPLILKN---WQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQL 198 (240)
Q Consensus 129 ~dg-~------v~iw~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~ 198 (240)
..+ . |.+++......... +..+..+. ..+.++.+|.... ++++-...
T Consensus 212 ~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~--------------~p~giavdp~~g~----LYvtd~~~----- 268 (496)
T 3kya_A 212 DYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK--------------QCNGATIHPINGE----LYFNSYEK----- 268 (496)
T ss_dssp CCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES--------------CCCCEEECTTTCC----EEEEETTT-----
T ss_pred CCCCCcccCceEEEEecCCCCceeecccceeeccCC--------------CceEEEEcCCCCe----EEEEECCC-----
Confidence 543 2 55554322111110 01111111 1127788996541 45555555
Q ss_pred CeEEEEEee-------cCCCCcce--------eEe-eecCCCCCCceEEEEEecCCC
Q 026295 199 NSSKVWEFD-------EAHNRWLP--------VAE-LALPEDRSDEVYAVAWALNIG 239 (240)
Q Consensus 199 ~~i~iw~~~-------~~~~~~~~--------~~~-~~~~~~h~~~v~~v~~sp~~~ 239 (240)
+.|..+|+. ++.. |.. ... +.. +-...-+.|+|+|++.
T Consensus 269 g~V~r~d~~~~~~~~~tg~~-~tp~~~~~~g~~~~l~~~--~~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 269 GQVFRLDLVDYFKTIKNGGS-WDPIVKNNPNTFKQLFTI--ADPSWEFQIFIHPTGK 322 (496)
T ss_dssp TEEEEECHHHHHHHHHTTCC-CCCBGGGCTTTEEEEEEC--SSSSCCEEEEECTTSS
T ss_pred CEEEEEecccccccccCcee-ecccccccccccceeEec--CCCCCceEEEEcCCCC
Confidence 889999987 3332 110 111 111 1223568999999985
No 316
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.23 E-value=2.4 Score=36.54 Aligned_cols=110 Identities=14% Similarity=0.099 Sum_probs=67.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe---eecCccEEEEEEcCCCCCCEEEEEecCCeEEEEE
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT---KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWE 86 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd 86 (240)
..|.++..+++|.+. .|+.++-|..|+.. +....... ......|.++...++ +.+. .|+.++-+..++
T Consensus 363 ~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~-----~~~~~~~~~~~~~~~~~v~~i~~d~~--g~lW-igt~~~Gl~~~~ 433 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLW-IGTDGGGINVFENG-----KRVAIYNKENRELLSNSVLCSLKDSE--GNLW-FGTYLGNISYYN 433 (781)
T ss_dssp SCEEEEEECTTSCEE-EEEBSSCEEEEETT-----EEEEECC-----CCCSBEEEEEECTT--SCEE-EEETTEEEEEEC
T ss_pred cceEEEEEcCCCCEE-EEeCCCcEEEEECC-----CCeEEEccCCCCCCCcceEEEEECCC--CCEE-EEeccCCEEEEc
Confidence 468899988888755 45545557888876 32221111 112356888888766 6654 456656688888
Q ss_pred eeeccCCCcccEEEEEee---eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 87 EIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
...+ + ...+. .....|.++...+ ++. |..++.. -|..|+..+
T Consensus 434 ~~~~-------~-~~~~~~~~~~~~~v~~i~~d~--~g~-lwigt~~-Gl~~~~~~~ 478 (781)
T 3v9f_A 434 TRLK-------K-FQIIELEKNELLDVRVFYEDK--NKK-IWIGTHA-GVFVIDLAS 478 (781)
T ss_dssp SSSC-------E-EEECCSTTTCCCCEEEEEECT--TSE-EEEEETT-EEEEEESSS
T ss_pred CCCC-------c-EEEeccCCCCCCeEEEEEECC--CCC-EEEEECC-ceEEEeCCC
Confidence 7543 2 22222 1335688887765 676 5556664 588888765
No 317
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.03 E-value=1.8 Score=37.02 Aligned_cols=163 Identities=8% Similarity=0.110 Sum_probs=85.1
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCCCCcEEEEe-E-----eeecCccEEEEEEcC-CCCCCEEEEEecCC------e
Q 026295 19 YCGQRLATGSTD----GTLSIFDSPDPSSSSFTCNL-K-----TKVHAGAILKVVWVP-PEFGDAVACICSDG------S 81 (240)
Q Consensus 19 ~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~-~-----~~~h~~~v~~~~~~~-~~~~~~l~s~~~d~------~ 81 (240)
.++..++.|+.+ ..+.+||.... +|..+. . +...... .++...+ + +.+++.|+.++ .
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~---~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~--~~lyv~GG~~~~~~~~~d 469 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD---KIDMKNIEVSSSEVPVARMC-HTFTTISRN--NQLLLIGGRKAPHQGLSD 469 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS---CEEEEECCCCCSCCCCCCBS-CEEEEETTT--TEEEEECCBSSTTCBCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC---eEEEeccCCCCCCCCccccc-eEEEEEccC--CEEEEEcCCCCCCCcccc
Confidence 456677777753 45778888744 676655 3 1111111 2333333 5 67777776543 4
Q ss_pred EEEEEeeeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC--cEEEEEecCcccccceeEEeeeecccce
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG--HVKVYELLDPLILKNWQLQAEFQNAIDS 159 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
+.+||... ..|..+..+......-..+.+ . ++.+++.|+.++ .+.+||+.+ ..|..+........
T Consensus 470 v~~yd~~t-----~~W~~~~~~p~~R~~h~~~~~-~--~~~iyv~GG~~~~~~v~~yd~~t----~~W~~~~~~g~~p~- 536 (695)
T 2zwa_A 470 NWIFDMKT-----REWSMIKSLSHTRFRHSACSL-P--DGNVLILGGVTEGPAMLLYNVTE----EIFKDVTPKDEFFQ- 536 (695)
T ss_dssp CEEEETTT-----TEEEECCCCSBCCBSCEEEEC-T--TSCEEEECCBCSSCSEEEEETTT----TEEEECCCSSGGGG-
T ss_pred EEEEeCCC-----CcEEECCCCCCCcccceEEEE-c--CCEEEEECCCCCCCCEEEEECCC----CceEEccCCCCCCC-
Confidence 66777654 357766555433333222222 3 677777877654 688898876 33554432110100
Q ss_pred eeccccccceeeeEEEeCCCCCCCCceEEEEecCCC--CCCCeEEEEEeecCC
Q 026295 160 VTMFRKASCISASISWNPQKGENQGSSFVLGFNSDT--PQLNSSKVWEFDEAH 210 (240)
Q Consensus 160 v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~--~~~~~i~iw~~~~~~ 210 (240)
..... .++.+..... .+++.|+.++. ...+.+.+||+.+..
T Consensus 537 ----~r~~~--~a~v~~~~~~----~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 537 ----NSLVS--AGLEFDPVSK----QGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ----SCCBS--CEEEEETTTT----EEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ----cccce--eEEEEeCCCC----EEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 00111 1355555421 26777776311 122568888887654
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.95 E-value=1.7 Score=33.69 Aligned_cols=110 Identities=11% Similarity=-0.009 Sum_probs=58.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee---ecCccEEEEEEcCC--CCCCEEEEEec---C---
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK---VHAGAILKVVWVPP--EFGDAVACICS---D--- 79 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~--~~~~~l~s~~~---d--- 79 (240)
.-..++|.|+|+++++ ..++.|++++... . +.+..+. .-......|+++|+ ..+.+.++-.. +
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G----~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISPSG----K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECSSC----E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeCCC----c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4678999999975554 5669999887331 2 2333221 12346889999884 11444444332 2
Q ss_pred -CeEEEEEeeeccCCCcccEEE-EEeee-ccccEEeEEEeecCCCcEEEEEe
Q 026295 80 -GSLLLWEEIVEDAQPLQWKLC-KSFES-TSTQVLDVQFGVSSTSLKLVAAY 128 (240)
Q Consensus 80 -~~v~iwd~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~l~~~~ 128 (240)
..|..++...........+.+ ..+.. .......+.|.| +|.++++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p--DG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP--DGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT--TSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC--CCcEEEEEC
Confidence 456666654321100011222 22221 112346789988 887555543
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.89 E-value=2.6 Score=35.52 Aligned_cols=160 Identities=4% Similarity=-0.139 Sum_probs=84.5
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCC-EEEEEecCCeEEEEEe
Q 026295 10 KGTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGD-AVACICSDGSLLLWEE 87 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~d~~v~iwd~ 87 (240)
.....++|++.+..|.-+. ..+.|..+++.... .....+..--.....|++.+. +. ++++-...+.|.+.++
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~----~~~~v~~~~~~~P~GlAvD~~--~~~ly~~d~~~~~I~v~~~ 113 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE----SVQNVVVSGLLSPDGLACDWL--GEKLYWTDSETNRIEVSNL 113 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC----ceEEEEeCCCCCcCeEEEEec--CCEEEEEeCCCCEEEEEEC
Confidence 3467889998776666554 35678888876321 011122222245778998875 44 4444455678988887
Q ss_pred eeccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeC--CCcEEEEEecCcccccceeEEeeeecccceeecccc
Q 026295 88 IVEDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYS--DGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRK 165 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 165 (240)
... .....+...-.....|+++| .+.+|..... .+.|...++.. .....+....
T Consensus 114 dG~-------~~~~l~~~~l~~P~~Iavdp--~~g~ly~tD~g~~~~I~r~~~dG-------~~~~~l~~~~-------- 169 (619)
T 3s94_A 114 DGS-------LRKVLFWQELDQPRAIALDP--SSGFMYWTDWGEVPKIERAGMDG-------SSRFIIINSE-------- 169 (619)
T ss_dssp TSC-------SCEEEECSSCSCCCCEEEET--TTTEEEEEECSSSCEEEEEETTS-------CSCEEEECSS--------
T ss_pred CCC-------CEEEEEeCCCCCCceEEEec--CCCeEEEeccCCCCEEEEEECCC-------CceEEEEeCC--------
Confidence 643 11111212334567899988 5444444442 34555444432 1111111100
Q ss_pred ccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 166 ASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 166 ~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
.-..+.+++++... .|..+.... +.|..++++..
T Consensus 170 -~~~P~Glald~~~~-----~LY~aD~~~----~~I~~~~~dG~ 203 (619)
T 3s94_A 170 -IYWPNGLTLDYEEQ-----KLYWADAKL----NFIHKSNLDGT 203 (619)
T ss_dssp -CSSEEEEEEETTTT-----EEEEEETTT----CCEEEESSSCC
T ss_pred -CCCCcEEEEEccCC-----EEEEEeCCC----CeEEEecCCCC
Confidence 01123788998765 455554432 77888877653
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.29 E-value=2.2 Score=32.95 Aligned_cols=107 Identities=10% Similarity=0.074 Sum_probs=58.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee---ecCccEEEEEEcCC-C-CCCEEEEEecC-----C
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK---VHAGAILKVVWVPP-E-FGDAVACICSD-----G 80 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~-~-~~~~l~s~~~d-----~ 80 (240)
.-..++|.|+|+++++ ..++.|++++ .. ..+.+..+. .-......|+|+|+ . .+.+.++-... .
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g----~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EG----RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-TT----EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-CC----CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 4578999999985555 5669999998 32 333333222 12346789999885 0 13433333322 4
Q ss_pred eEEEEEeeeccCCCcccEEE-EEee---eccccEEeEEEeecCCCcEEEEE
Q 026295 81 SLLLWEEIVEDAQPLQWKLC-KSFE---STSTQVLDVQFGVSSTSLKLVAA 127 (240)
Q Consensus 81 ~v~iwd~~~~~~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~~l~~~ 127 (240)
.|..++..... ....+.+ ..+. ........++|.| +|.++++.
T Consensus 106 ~v~r~~~~~~~--~~~~~~l~~~~p~~~~~~h~~~~l~~~p--dG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGER--GVLDRVVLDGIPARPHGLHSGGRIAFGP--DGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSC--EEEEEEEEEEECCCTTCCCCCCCEEECT--TSCEEEEC
T ss_pred EEEEEEeCCCC--cCceEEEEEeCCCCCCCCcCCceEEECC--CCCEEEEE
Confidence 66666664210 0001222 2232 1112346899988 88755553
No 321
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.27 E-value=2.3 Score=33.01 Aligned_cols=156 Identities=10% Similarity=0.063 Sum_probs=86.2
Q ss_pred CCcEEEEeCCCCCCCcEEEEeEe--e-ecC-ccEEEEEE--cCCCCCC-EEEEEecCCeEEEEEeeeccCCCcccEEEEE
Q 026295 30 DGTLSIFDSPDPSSSSFTCNLKT--K-VHA-GAILKVVW--VPPEFGD-AVACICSDGSLLLWEEIVEDAQPLQWKLCKS 102 (240)
Q Consensus 30 d~~i~iw~~~~~~~~~~~~~~~~--~-~h~-~~v~~~~~--~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 102 (240)
+++|++|++..... +...+... . ... ..++.+++ +|. .+. +++....+|.+..|++..........+.+++
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~-~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQK-TGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTT-TCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCC-CCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 57899997742210 22322111 1 111 45667777 664 143 6777888999999999643221123367777
Q ss_pred eeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEe--CCCC
Q 026295 103 FESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWN--PQKG 180 (240)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~--p~~~ 180 (240)
|... ..+..+...+ ....|..+-.+.-|..++... ......+++..+... .....+..++.- +++.
T Consensus 176 f~lg-sq~EgcvvDd--~~g~Lyv~eEd~GIw~~da~p-~~~~~~~~v~~~~~g--------~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 176 FKMN-SQTEGMAADD--EYGRLYIAEEDEAIWKFSAEP-DGGSNGTVIDRADGR--------HLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp EECS-SCEEEEEEET--TTTEEEEEETTTEEEEEECST-TSCSCCEEEEEBSSS--------SBCSCEEEEEEEECGGGC
T ss_pred ecCC-CCcceEEEcC--CCCeEEEecccceEEEEeCCc-CCCCCceEEEEecCC--------ccccCcceEEEEecCCCC
Confidence 7754 5677888877 667788888885554444332 111123344333111 001112256653 3332
Q ss_pred CCCCceEEEEecCCCCCCCeEEEEEee
Q 026295 181 ENQGSSFVLGFNSDTPQLNSSKVWEFD 207 (240)
Q Consensus 181 ~~~~~~l~~~~~dd~~~~~~i~iw~~~ 207 (240)
+ +|++++..+ +++.+||..
T Consensus 244 ---g-yLivSsQG~----~s~~Vydr~ 262 (355)
T 3amr_A 244 ---G-YLMASSQGN----SSYAIYDRQ 262 (355)
T ss_dssp ---E-EEEEEEGGG----TEEEEEESS
T ss_pred ---E-EEEEEcCCC----CEEEEEECC
Confidence 1 566666443 899999986
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.06 E-value=2.4 Score=32.78 Aligned_cols=73 Identities=18% Similarity=0.111 Sum_probs=42.9
Q ss_pred CccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEee---eccccEEeEEEeecCC----CcEEEEEe
Q 026295 56 AGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFE---STSTQVLDVQFGVSST----SLKLVAAY 128 (240)
Q Consensus 56 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~----~~~l~~~~ 128 (240)
-.....|+|.|+ |.++++ ..++.|++++.. + . ..+..+. ........|+++| + +.+.++-+
T Consensus 28 l~~P~~ia~~pd--G~l~V~-e~~g~I~~~d~~-G-----~-~~~~~~~v~~~g~~g~~gia~~p--df~~~g~lyv~~~ 95 (354)
T 3a9g_A 28 LEVPWSIAPLGG--GRYLVT-ERPGRLVLISPS-G-----K-KLVASFDVANVGEAGLLGLALHP--EFPKKSWVYLYAS 95 (354)
T ss_dssp CSCEEEEEEEET--TEEEEE-ETTTEEEEECSS-C-----E-EEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEE
T ss_pred CCCCeEEEEcCC--CeEEEE-eCCCEEEEEeCC-C-----c-eEeeccceeecCCCceeeEEeCC--CCCcCCEEEEEEe
Confidence 345678999998 875554 566889888632 2 0 2232221 2235678899988 6 44333333
Q ss_pred C---C----CcEEEEEecC
Q 026295 129 S---D----GHVKVYELLD 140 (240)
Q Consensus 129 ~---d----g~v~iw~~~~ 140 (240)
. + +.|..|+...
T Consensus 96 ~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp EECGGGCEEEEEEEEEECS
T ss_pred ccCCCCCcceEEEEEEECC
Confidence 2 2 4566676653
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.96 E-value=2.6 Score=32.77 Aligned_cols=105 Identities=10% Similarity=0.028 Sum_probs=54.6
Q ss_pred EEEEEEcCCCCCCEEEEE------------ecCCeEEEEEeeeccCCCcccEEEEEeee-----ccccEEeEEEeecCCC
Q 026295 59 ILKVVWVPPEFGDAVACI------------CSDGSLLLWEEIVEDAQPLQWKLCKSFES-----TSTQVLDVQFGVSSTS 121 (240)
Q Consensus 59 v~~~~~~~~~~~~~l~s~------------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ 121 (240)
.-++...|+ |..++++ ..+|.|.++|+...... .+.+ .+.+ ..-....+.+.+..++
T Consensus 52 ~EDi~~~~~--G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~---~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg 125 (355)
T 3sre_A 52 SEDLEILPN--GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA---VSEL-EIIGNTLDISSFNPHGISTFIDDDN 125 (355)
T ss_dssp CCEEEECTT--SEEEEEECCC-----------CCEEEEEETTSSSCC---EEEC-EEECSSCCGGGCCEEEEEEEECTTC
T ss_pred cceeEEcCC--CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc---eEEE-EccCCCCCcCceeeeeeEEEECCCC
Confidence 346666676 7665555 26889999998643221 1111 1221 2235667777653234
Q ss_pred c-EEEEEe-C--CCcEEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCC
Q 026295 122 L-KLVAAY-S--DGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKG 180 (240)
Q Consensus 122 ~-~l~~~~-~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~ 180 (240)
. +|+++. . +.+|.+|++..... ....+..+... .....|++...+++.
T Consensus 126 ~~~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~---------~~~~pND~~v~~~G~ 177 (355)
T 3sre_A 126 TVYLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHK---------LLPSVNDIVAVGPEH 177 (355)
T ss_dssp CEEEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCT---------TCSSEEEEEEEETTE
T ss_pred cEEEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccC---------CCCCCceEEEeCCCC
Confidence 3 344443 2 46788888864321 12333333322 122346888888885
No 324
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.71 E-value=2.8 Score=32.49 Aligned_cols=114 Identities=12% Similarity=0.013 Sum_probs=62.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe----eecCccEEEEEEcCC--CCCCEEEEEe--cCCe
Q 026295 10 KGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT----KVHAGAILKVVWVPP--EFGDAVACIC--SDGS 81 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~--~~~~~l~s~~--~d~~ 81 (240)
..-+.++|.|+|+++++-...|.|++++.... ....+..+ ..-.+....|+++|+ ..+.+.++-+ .+..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g---~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTG---RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCC---cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 35678999999998777665899998875422 22233222 123456889999884 1144444322 3344
Q ss_pred EEEEEeeecc---CCCcccEEE-EEee-eccccEEeEEEeecCCCcEEEEEe
Q 026295 82 LLLWEEIVED---AQPLQWKLC-KSFE-STSTQVLDVQFGVSSTSLKLVAAY 128 (240)
Q Consensus 82 v~iwd~~~~~---~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~l~~~~ 128 (240)
|.-|.+...+ ......+.+ ..+. .....-..|.|.| +|.++++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp--DG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP--DKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT--TSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC--CCCEEEEEC
Confidence 5445444311 011112222 2232 1223446799998 887666544
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.10 E-value=4.9 Score=33.91 Aligned_cols=159 Identities=3% Similarity=-0.152 Sum_probs=85.9
Q ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLATG-STDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
....++|++.+..|..+ ..++.|+.+++.... .+.+ +..-......|++.+. .+++..+-...+.|.+.++..
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~---~~~v--~~~g~~~P~GlAvD~~-~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSA---LEHV--VEFGLDYPEGMAVDWL-GKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE--ECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCC---cEEE--EeCCCCCcceEEEEeC-CCEEEEEECCCCEEEEEecCC
Confidence 56789999976655544 456888888886431 1211 1111234567777655 134444444466888888754
Q ss_pred ccCCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEe--CCCcEEEEEecCcccccceeEEeeeecccceeecccccc
Q 026295 90 EDAQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAY--SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKAS 167 (240)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (240)
... ..+ +...-.....|+++| ...+|.... ..+.|...++... ....+.....
T Consensus 112 ~~~-----~~l--~~~~l~~P~~iavdp--~~G~lY~tD~g~~~~I~r~~~dG~-------~~~~l~~~~~--------- 166 (628)
T 4a0p_A 112 QHR-----QVL--VWKDLDSPRALALDP--AEGFMYWTEWGGKPKIDRAAMDGS-------ERTTLVPNVG--------- 166 (628)
T ss_dssp TTC-----EEE--ECSSCCCEEEEEEET--TTTEEEEEECSSSCEEEEEETTSC-------SCEEEECSCS---------
T ss_pred CcE-----EEE--EeCCCCCcccEEEcc--CCCeEEEeCCCCCCEEEEEeCCCC-------ceEEEECCCC---------
Confidence 310 111 112234568899987 444444443 2456666655431 1111111111
Q ss_pred ceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCC
Q 026295 168 CISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAH 210 (240)
Q Consensus 168 ~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~ 210 (240)
..+.+++++... .|..+.... +.|..++++...
T Consensus 167 -~P~GlalD~~~~-----~LY~aD~~~----~~I~~~d~dG~~ 199 (628)
T 4a0p_A 167 -RANGLTIDYAKR-----RLYWTDLDT----NLIESSNMLGLN 199 (628)
T ss_dssp -SEEEEEEETTTT-----EEEEEETTT----TEEEEEETTSCS
T ss_pred -CcceEEEccccC-----EEEEEECCC----CEEEEEcCCCCc
Confidence 123788998765 555555433 788888876543
No 326
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.00 E-value=5.3 Score=32.25 Aligned_cols=117 Identities=9% Similarity=0.074 Sum_probs=60.7
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCC-CcEEEEeE-ee-e----cCccEEEEEEcCC--CCCCEEEEEec--
Q 026295 11 GTTSSSWNYCGQ-RLATGSTDGTLSIFDSPDPSS-SSFTCNLK-TK-V----HAGAILKVVWVPP--EFGDAVACICS-- 78 (240)
Q Consensus 11 ~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~-~~-~----h~~~v~~~~~~~~--~~~~~l~s~~~-- 78 (240)
.-+.|+|.|+|. +|+++...|.|++++...... ....-+.. +. + ..+....|+|.|+ ..+.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 456899999996 566667889999997542210 01111111 11 1 1356789999884 11344333322
Q ss_pred C----------CeEEEEEeeeccCC---CcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeC
Q 026295 79 D----------GSLLLWEEIVEDAQ---PLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYS 129 (240)
Q Consensus 79 d----------~~v~iwd~~~~~~~---~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~ 129 (240)
+ ..|.-|.+...+.. ....+.+..+. .....-..|.|.| +|.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp--DG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP--DGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT--TSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC--CCcEEEEeCC
Confidence 1 13333444321111 11224444433 2234567899999 8876665554
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.56 E-value=7 Score=32.87 Aligned_cols=158 Identities=4% Similarity=-0.108 Sum_probs=81.7
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeee
Q 026295 11 GTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIV 89 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 89 (240)
.+..++|++.+..|..+. ..+.|+.+++.... .+.+ +...-.....+++.+. .+++..+-...+.|.+.++..
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~---~~~v--~~~~~~~p~GlAvD~~-~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSG---SQFV--VTAQIAHPDGIAVDWV-ARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE--ECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCc---cEEE--EECCCCCcCceEEecc-cCcEEEEeCCCCcEEEEeCCC
Confidence 466788988655555444 46778888876431 1111 1222235667888754 144444545567888887754
Q ss_pred ccCCCcccEEEEEe-eeccccEEeEEEeecCC-CcEEEEEe-CCCcEEEEEecCcccccceeEEeeeecccceeeccccc
Q 026295 90 EDAQPLQWKLCKSF-ESTSTQVLDVQFGVSST-SLKLVAAY-SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKA 166 (240)
Q Consensus 90 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (240)
. . ...+ ...-.....|+++| . |.++.+-. ..+.|...++.. .....+... .
T Consensus 424 ~-------~-~~~l~~~~l~~P~~iavdp--~~G~ly~tD~g~~~~I~r~~~dG-------~~~~~l~~~---------~ 477 (619)
T 3s94_A 424 T-------M-RKILISEDLEEPRAIVLDP--MVGYMYWTDWGEIPKIERAALDG-------SDRVVLVNT---------S 477 (619)
T ss_dssp C-------S-CEEEECTTCCSEEEEEEET--TTTEEEEEECSSSCEEEEEETTS-------CSCEEEECS---------S
T ss_pred C-------e-EEEEEECCCCCeeeEEEEc--CCCcEEEecCCCCCEEEEEccCC-------CccEEEEeC---------C
Confidence 3 1 1122 22335568899988 5 44333332 224454444432 111111110 0
Q ss_pred cceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 167 SCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 167 ~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
.-..+.+++++... .|..+.... +.|..++++..
T Consensus 478 l~~P~GlalD~~~~-----~LY~aD~~~----~~I~~~~~dG~ 511 (619)
T 3s94_A 478 LGWPNGLALDYDEG-----KIYWGDAKT----DKIEVMNTDGT 511 (619)
T ss_dssp CSCEEEEEEETTTT-----EEEEEETTT----TEEEEEESSSC
T ss_pred CCCCeeeEEcccCC-----EEEEEECCC----CEEEEEecCCC
Confidence 11123788887665 455554432 67777776543
No 328
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.42 E-value=8 Score=33.33 Aligned_cols=184 Identities=11% Similarity=0.004 Sum_probs=98.4
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe-------eecCccEEEEEEcCCCCCCEEEEEecCCe
Q 026295 9 DKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT-------KVHAGAILKVVWVPPEFGDAVACICSDGS 81 (240)
Q Consensus 9 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 81 (240)
...|.++..+++|.+- .|..++-|..++.... ..+..... ......|.++...++ |.+ ..|+.++-
T Consensus 312 ~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~l-Wigt~~~G 384 (781)
T 3v9f_A 312 NASARYIFQDSFNNIW-IGTWGGGINFISNAPP---TFHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GKL-WIGTDGGG 384 (781)
T ss_dssp SSCEEEEEECSSCCEE-EEEBSSCEEEECSSCC---SCEEEC----CCCSSCCSSSCEEEEEECTT--SCE-EEEEBSSC
T ss_pred CCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCC---cceeeccCccccccCCCCCcceEEEEEcCC--CCE-EEEeCCCc
Confidence 3478999999988744 4555566778887532 22222110 012356888888776 664 45555566
Q ss_pred EEEEEeeeccCCCcccEEEEEe----eeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeeccc
Q 026295 82 LLLWEEIVEDAQPLQWKLCKSF----ESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAI 157 (240)
Q Consensus 82 v~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 157 (240)
|..++.... ....+ ......|.++...+ ++. |..|+.++-+..++..+ .+.. .+....
T Consensus 385 l~~~~~~~~--------~~~~~~~~~~~~~~~v~~i~~d~--~g~-lWigt~~~Gl~~~~~~~------~~~~-~~~~~~ 446 (781)
T 3v9f_A 385 INVFENGKR--------VAIYNKENRELLSNSVLCSLKDS--EGN-LWFGTYLGNISYYNTRL------KKFQ-IIELEK 446 (781)
T ss_dssp EEEEETTEE--------EEECC-----CCCSBEEEEEECT--TSC-EEEEETTEEEEEECSSS------CEEE-ECCSTT
T ss_pred EEEEECCCC--------eEEEccCCCCCCCcceEEEEECC--CCC-EEEEeccCCEEEEcCCC------CcEE-EeccCC
Confidence 788886542 11111 12335688887765 666 56677766688888764 1211 111100
Q ss_pred ceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 158 DSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 158 ~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
.....+.++...+++ .|-+|.. +-|..|+..+.. +...............|+++...++
T Consensus 447 -------~~~~~v~~i~~d~~g------~lwigt~------~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 447 -------NELLDVRVFYEDKNK------KIWIGTH------AGVFVIDLASKK--VIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp -------TCCCCEEEEEECTTS------EEEEEET------TEEEEEESSSSS--CCEEECTTTSSCSCSCEEEEEECTT
T ss_pred -------CCCCeEEEEEECCCC------CEEEEEC------CceEEEeCCCCe--EEecccCcccccccceeEEEEEcCC
Confidence 000122366666666 3656665 457777766543 2221111100011346888877766
Q ss_pred C
Q 026295 238 I 238 (240)
Q Consensus 238 ~ 238 (240)
+
T Consensus 506 g 506 (781)
T 3v9f_A 506 G 506 (781)
T ss_dssp C
T ss_pred C
Confidence 5
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.28 E-value=13 Score=33.99 Aligned_cols=146 Identities=15% Similarity=0.164 Sum_probs=82.7
Q ss_pred CCEEEEEe----------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeec
Q 026295 21 GQRLATGS----------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 21 ~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
..+|+.|. ..|.|.+|++.+. ..+.+.... .+++|++++--. |.++++. ..+|++|++...
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~---kL~lv~~~~-v~g~v~al~~~~---g~Lla~i--g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG---KLQTVAEKE-VKGAVYSMVEFN---GKLLASI--NSTVRLYEWTTE 914 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETT---EEEEEEEEE-ESSCEEEEEEET---TEEEEEE--TTEEEEEEECTT
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECC---EEEEEEEEE-cCCcCEEEeeeC---CEEEEEc--CCEEEEEECCCC
Confidence 46888886 3478999998632 555555544 478899888533 5544443 468999999654
Q ss_pred cCCCcccEEEE-EeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEeeeecccceeeccccccce
Q 026295 91 DAQPLQWKLCK-SFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCI 169 (240)
Q Consensus 91 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (240)
+.++ ..... ..|..+.... .+.++++|..-..|.+...+.. ..+...... .....++.
T Consensus 915 -------~~L~~~~~~~-~~i~~~~l~~--~~~~I~vgD~~~Sv~~~~y~~~--~~~L~~~a~-D~~~~~vt-------- 973 (1158)
T 3ei3_A 915 -------KELRTECNHY-NNIMALYLKT--KGDFILVGDLMRSVLLLAYKPM--EGNFEEIAR-DFNPNWMS-------- 973 (1158)
T ss_dssp -------SCEEEEEEEC-CCSCEEEEEE--ETTEEEEEESSBCEEEEEEETT--TTEEEEEEE-CCSCBCEE--------
T ss_pred -------ceEEEEeecc-ccEEEEEEec--cCCEEEEEEhhheEEEEEEEcC--CCeEEEEEe-ecccccEE--------
Confidence 2222 11111 1122223323 4667888888778887766531 111111111 11122222
Q ss_pred eeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecC
Q 026295 170 SASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEA 209 (240)
Q Consensus 170 ~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~ 209 (240)
++.+-.+. .++.+..+ |.|.++.....
T Consensus 974 --a~~~ld~~------t~l~aD~~-----gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 974 --AVEILDDD------NFLGAENA-----FNLFVCQKDSA 1000 (1158)
T ss_dssp --EEEEEETT------EEEEEETT-----SEEEEEEECTT
T ss_pred --EEEEEccC------cEEEEcCC-----CcEEEEecCCC
Confidence 56655443 56777777 99999988653
No 330
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.19 E-value=3.2 Score=32.07 Aligned_cols=29 Identities=7% Similarity=0.198 Sum_probs=21.6
Q ss_pred ccEEeEEEeecCCCcEEEEEeCCCcEEEEEe
Q 026295 108 TQVLDVQFGVSSTSLKLVAAYSDGHVKVYEL 138 (240)
Q Consensus 108 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~ 138 (240)
...+.|+|.| +|..|+++...|.|++++.
T Consensus 18 ~~P~~i~~~p--dG~~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLP--DNHGMLITLRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECS--TTCCEEEEETTTEEEEEET
T ss_pred CCcEEEEEcC--CCCEEEEEeCCceEEEEeC
Confidence 3467899999 8883445566799988874
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.18 E-value=7.6 Score=31.24 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=33.0
Q ss_pred ccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeee------ccccEEeEEEee
Q 026295 57 GAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFES------TSTQVLDVQFGV 117 (240)
Q Consensus 57 ~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~ 117 (240)
.....|+|.|+ |.++++-...+.|.+++...+. ...+..+.. .......|+|+|
T Consensus 27 ~~P~~~a~~pd--G~l~V~e~~gg~I~~~~~~~g~-----~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 27 NKPHALLWGPD--NQIWLTERATGKILRVNPESGS-----VKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp SSEEEEEECTT--SCEEEEETTTCEEEEECTTTCC-----EEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CCceEEEEcCC--CcEEEEEcCCCEEEEEECCCCc-----EeEEecCCccccccCCCCceeEEEECC
Confidence 45679999999 9877765433467777643221 123333321 245677899988
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=84.38 E-value=24 Score=32.21 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=48.6
Q ss_pred cccceEEEEECCC------CCEEEEEeC-CCcEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEEecC
Q 026295 8 LDKGTTSSSWNYC------GQRLATGST-DGTLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACICSD 79 (240)
Q Consensus 8 h~~~v~~~~~s~~------~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~d 79 (240)
.+..|.|+++.+. ++++|.|.. |++|+|+++. ..+.+....- -+....++.+..-....+|..|-.|
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~-----~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP-----SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT-----TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC-----CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 3568999999863 369999996 9999999997 3333322211 1123334433211114678888899
Q ss_pred CeEEEEEeee
Q 026295 80 GSLLLWEEIV 89 (240)
Q Consensus 80 ~~v~iwd~~~ 89 (240)
|.+.-+.+..
T Consensus 627 G~l~~~~~d~ 636 (1158)
T 3ei3_A 627 GALFYFGLNI 636 (1158)
T ss_dssp SEEEEEEECT
T ss_pred CeEEEEEEcC
Confidence 9887666643
No 333
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.87 E-value=16 Score=32.57 Aligned_cols=31 Identities=26% Similarity=0.201 Sum_probs=24.8
Q ss_pred cEEeEEEeecCCCcEEEEEeCCCcEEEEEecCc
Q 026295 109 QVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 109 ~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
.+.++...+ +..++++-+.|+++|+|++.+.
T Consensus 237 ~~~~~~~~~--~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLS--TYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEET--TTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecC--CCcEEEEEECCCEEEEEECCCC
Confidence 445556555 7778999999999999999883
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.74 E-value=13 Score=26.95 Aligned_cols=115 Identities=12% Similarity=0.091 Sum_probs=62.1
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec--CccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeec
Q 026295 13 TSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH--AGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVE 90 (240)
Q Consensus 13 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 90 (240)
.++.|+++|.+.++ .||.|.-++........+.-....-+. =..+..|.+.|+ |.+.+.. |+.+. .-...
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~--G~Lyav~--dg~ly--r~~~P 162 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN--GYLYAVH--GQQFY--KALPP 162 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT--SCEEEEE--TTEEE--EECCC
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC--ceEEEEe--CCcEE--ecCCC
Confidence 68899999998888 558887666533322222111111111 135789999999 8877666 77743 22222
Q ss_pred cCCCcccEEEEEee--eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCc
Q 026295 91 DAQPLQWKLCKSFE--STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 91 ~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
......|....+.- ..-...+.+.|.| ++.+.++. +| ++|....+
T Consensus 163 ~~~~~~wl~~~~~~g~~g~~~yr~l~f~~--~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 163 VSNQDNWLARATKIGQGGWDTFKFLFFSS--VGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp SSTTCCHHHHCEEEESSSGGGEEEEEECT--TSCEEEEE--TT--EEEEESCC
T ss_pred CCCCcccccccceeccCCcceEEEEEECC--CCcEEEEe--CC--eEEecCCc
Confidence 22223332212221 2223445567877 88755544 66 55555443
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=80.87 E-value=24 Score=33.24 Aligned_cols=32 Identities=3% Similarity=0.113 Sum_probs=21.1
Q ss_pred eEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeecCCCCc
Q 026295 172 SISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRW 213 (240)
Q Consensus 172 ~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~ 213 (240)
++.-++..+ ++..-..- |.|++||+.++...+
T Consensus 263 ~~~vs~k~g-----~iy~itk~-----G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 263 AMQISEKHD-----VVFLITKY-----GYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEeccccC-----EEEEEecC-----ceEEEEecccchhhh
Confidence 455555554 44444444 999999999886554
No 336
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.75 E-value=14 Score=31.72 Aligned_cols=21 Identities=19% Similarity=0.385 Sum_probs=19.5
Q ss_pred CCcEEEEEeCCCcEEEEEecC
Q 026295 120 TSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 120 ~~~~l~~~~~dg~v~iw~~~~ 140 (240)
+..++++-+.|.++|+|++.+
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEcCCeEEEEEcCC
Confidence 577899999999999999998
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.90 E-value=20 Score=27.57 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=37.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec-CccEEEEEEcCC--CCCCEEEEE-ecCCeEEEEEeeec
Q 026295 22 QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH-AGAILKVVWVPP--EFGDAVACI-CSDGSLLLWEEIVE 90 (240)
Q Consensus 22 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~--~~~~~l~s~-~~d~~v~iwd~~~~ 90 (240)
.+++.++.||.|.-+|.. +++.+-+++.. ..++....- +. ..+..++.. ..||.|..++...+
T Consensus 11 ~~V~v~t~dG~l~Ald~~-----tG~~~W~~~~~~~~p~~~~~~-~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRR-----NGHIIWSIEPENFQPLIEIQE-PSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETT-----TTEEEEEECGGGSCCSEECCC-SCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECC-----CCcEEEEecCCccCCcEEecC-CccccCCcEEEEEECCCCEEEEEECCCC
Confidence 478889999999999987 55666666542 122222111 11 012333333 57899988887544
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=78.48 E-value=29 Score=29.21 Aligned_cols=103 Identities=4% Similarity=-0.103 Sum_probs=58.3
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCCCcEEEEeE-ee--ecCccEEEEEEcCCCCCCEE-EEEecCCeEEEE
Q 026295 11 GTTSSSWNYCGQRLATGS-TDGTLSIFDSPDPSSSSFTCNLK-TK--VHAGAILKVVWVPPEFGDAV-ACICSDGSLLLW 85 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~-~~--~h~~~v~~~~~~~~~~~~~l-~s~~~d~~v~iw 85 (240)
.+..++|++..+.|.-+. ..+.|+.++..... ..+.+.. .. .....+..|++... +..| .+-...+.|.+.
T Consensus 341 ~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~--~~~v~~~~~~~~~~~~~p~glAvD~~--~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 341 NVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQ--GFTVVVSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATNVINVT 416 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEEC--------CCCEEEEEEETT--TTEEEEEETTTTEEEEE
T ss_pred CceEEEEecCCCeEEEEecCcceEEEEEcCCCC--ceEEEEcccccccccCCcceEEeecc--CCeEEEEcCCCCEEEEE
Confidence 477899998766665554 45678878776431 1122211 00 01235778888776 5544 455556788888
Q ss_pred EeeeccCCCcccEEEEEe-eeccccEEeEEEeecCCCcEEEE
Q 026295 86 EEIVEDAQPLQWKLCKSF-ESTSTQVLDVQFGVSSTSLKLVA 126 (240)
Q Consensus 86 d~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~ 126 (240)
++.. +....+ .......+.|+++|. .|.++.+
T Consensus 417 ~~~G--------~~~~~l~~~~l~~Pr~iavdp~-~g~ly~t 449 (628)
T 4a0p_A 417 RLDG--------RSVGVVLKGEQDRPRAVVVNPE-KGYMYFT 449 (628)
T ss_dssp ETTS--------CEEEEEEECTTCCEEEEEEETT-TTEEEEE
T ss_pred ECCC--------CeEEEEEeCCCCceeeEEEecC-CCeEEEe
Confidence 8753 322232 233456789999873 3443343
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=76.44 E-value=7.8 Score=29.87 Aligned_cols=118 Identities=11% Similarity=0.064 Sum_probs=59.1
Q ss_pred CCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeeecc-ccEEeEEEeec--CCCcEEEEE-eCCCcEEEEEecCccccc
Q 026295 70 GDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTS-TQVLDVQFGVS--STSLKLVAA-YSDGHVKVYELLDPLILK 145 (240)
Q Consensus 70 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~--~~~~~l~~~-~~dg~v~iw~~~~~~~~~ 145 (240)
+.+++.++.||.|.-.|..++ +..-.++... .++.... .|. .++..++.. +.||.|..++..++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG-------~~~W~~~~~~~~p~~~~~-~~~~~~~~~~~vv~p~~dG~l~a~~~~~G---- 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNG-------HIIWSIEPENFQPLIEIQ-EPSRLETYETLIIEPFGDGNIYYFNAHQG---- 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTT-------EEEEEECGGGSCCSEECC-CSCTTTSSEEEEECCSTTTEEEEEETTTE----
T ss_pred CCEEEEEeCCCeEEEEECCCC-------cEEEEecCCccCCcEEec-CCccccCCcEEEEEECCCCEEEEEECCCC----
Confidence 356778888998888887665 5544444320 1111110 010 123333333 58999988887652
Q ss_pred ceeEEeeeecccceeeccccccceeeeEEEeC--CC----CCCCCceEEEEecCCCCCCCeEEEEEeecCCCCcce
Q 026295 146 NWQLQAEFQNAIDSVTMFRKASCISASISWNP--QK----GENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLP 215 (240)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p--~~----~~~~~~~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~ 215 (240)
.....+..... +. .. -+.... -- ....+..+.+|+.+ +.+...|+.+++..|..
T Consensus 78 --~~~~~~~~~~l-v~-----~S---P~~~~~~pvv~~~~~~~~~g~Vy~Gs~~-----g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 78 --LQKLPLSIRQL-VS-----TS---PLHLKTNIVVNDSGKIVEDEKVYTGSMR-----TIMYTINMLNGEIISAF 137 (339)
T ss_dssp --EEEEEEEHHHH-HT-----TC---SEEEECC----------CCEEEEECEEE-----EEEEEEETTTCCEEEEE
T ss_pred --cEEeeeccccc-ee-----cc---ccccCCCceeecccccccCCEEEEEecC-----CEEEEEECCCCcEEEEE
Confidence 22222221110 00 00 011100 00 00001167888888 89999998888777755
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.04 E-value=8 Score=34.45 Aligned_cols=37 Identities=19% Similarity=0.065 Sum_probs=30.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT 52 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 52 (240)
.+.+++..++..++++-+.|+++|||++. +++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~-----t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-----TNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT-----TTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC-----CCCeEeee
Confidence 56778888888999999999999999998 55666554
No 341
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.07 E-value=15 Score=33.38 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=23.6
Q ss_pred EEeEEEeecCCCcEEEEEeCCCcEEEEEecCc
Q 026295 110 VLDVQFGVSSTSLKLVAAYSDGHVKVYELLDP 141 (240)
Q Consensus 110 v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 141 (240)
+.+++..+ +..++++-+.|+++|+|++.+.
T Consensus 240 ~vs~~~~~--~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 240 IISMIFLS--TYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp BSCCEEET--TTTEEEEEBTTCEEEEEETTTT
T ss_pred eEEeeccC--CccEEEEEeCCCEEEEEECCCC
Confidence 34445544 7788999999999999999873
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=68.50 E-value=38 Score=26.09 Aligned_cols=85 Identities=9% Similarity=0.004 Sum_probs=48.4
Q ss_pred EEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEe----eeccccEEeEEEeec--CCC
Q 026295 48 CNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSF----ESTSTQVLDVQFGVS--STS 121 (240)
Q Consensus 48 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~--~~~ 121 (240)
.+..+..--.....|+|.|+ |.++++--..|.|++++...+. ...+..+ .........|+++|. .++
T Consensus 23 ~~~~va~gL~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g~-----~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPG--GDLLVSSRDEATITRVDAKTGR-----KTELGEVPGVSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp EEEEEECCCSSEEEEEECTT--SCEEEEETTTCEEEEECTTTCC-----EEEEEECTTCCCBTTBSEEEEEECTTHHHHC
T ss_pred eeEEeecCCCCceEEEEcCC--CcEEEEEecCCEEEEEECCCCc-----EeeecccCceeecCCCCceeeEeccccccCC
Confidence 34444443456789999999 9877776548888888753321 0223222 123466789999882 124
Q ss_pred cEEEEEe--CCCcEEEEEec
Q 026295 122 LKLVAAY--SDGHVKVYELL 139 (240)
Q Consensus 122 ~~l~~~~--~dg~v~iw~~~ 139 (240)
.+.++-+ .++.|.-|.+.
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBC
T ss_pred EEEEEEecCCCCEEEEEEeC
Confidence 4333322 34445445544
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.39 E-value=17 Score=30.40 Aligned_cols=78 Identities=9% Similarity=0.043 Sum_probs=50.0
Q ss_pred ccEEeEEEeecCCCcEEEEEe-CCCcEEEEEecCcccccce-------eEEeeeecccceeeccccccceeeeEEEeCCC
Q 026295 108 TQVLDVQFGVSSTSLKLVAAY-SDGHVKVYELLDPLILKNW-------QLQAEFQNAIDSVTMFRKASCISASISWNPQK 179 (240)
Q Consensus 108 ~~v~~~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~ 179 (240)
.....+..+| +|+++++++ .+.+|.++|++.-...-.. ....+..... .....+|.+++
T Consensus 323 ksPHGv~vsP--DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-----------GPlHt~Fd~~G 389 (638)
T 3sbq_A 323 KNPHGCNTSS--DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-----------GPLHTTFDGRG 389 (638)
T ss_dssp SSCCCEEECT--TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-----------CEEEEEECSSS
T ss_pred CCCcceeeCC--CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-----------cccEEEECCCC
Confidence 3446788888 999877766 6789999999853221100 1111222222 22368899988
Q ss_pred CCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 180 GENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 180 ~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
. ...+-.-| ..|--|++..
T Consensus 390 ~-----aYTtlfid-----SqvvkWni~~ 408 (638)
T 3sbq_A 390 N-----AYTTLFID-----SQVVKWNMEE 408 (638)
T ss_dssp E-----EEEEETTT-----TEEEEEEHHH
T ss_pred c-----eEeeeeec-----ceEEEEeccH
Confidence 5 56666677 9999999865
No 344
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=66.14 E-value=44 Score=25.89 Aligned_cols=154 Identities=14% Similarity=0.214 Sum_probs=88.2
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCC
Q 026295 15 SSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQP 94 (240)
Q Consensus 15 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 94 (240)
.-.+|..+.+|.-. ..+++|||++ +-+.+..+.- ...|..-+|-.+ +.|+-.+ +..|.-|++....
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnle-----tK~klks~~~-~e~VvfWkWis~---~~L~lVT-~taVyHWs~~~~s--- 137 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIE-----MKSKMKAHTM-TDDVTFWKWISL---NTVALVT-DNAVYHWSMEGES--- 137 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETT-----TTEEEEEEEC-SSCEEEEEECSS---SEEEEEE-SSEEEEEESSTTC---
T ss_pred eeeCCCccEEEEec-CCeEEEechH-----Hhhhhcceec-CCccEEEEecCC---CeEEEEc-CCcEEEEcccCCC---
Confidence 34588888887766 5789999998 4355555543 467888899654 4444443 5689999986532
Q ss_pred cccEEEEEeeecc----ccEEeEEEeecCCCcEEEEEe-------CCCcEEEEEecCcccccceeEEeeeecccceeecc
Q 026295 95 LQWKLCKSFESTS----TQVLDVQFGVSSTSLKLVAAY-------SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMF 163 (240)
Q Consensus 95 ~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~-------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~ 163 (240)
.+...|..|. ..|-.-..++ +.++++..+ -.|.+.+|..+. ...+.+.+|.....
T Consensus 138 ---~P~kvFdR~~~L~~~QIInY~~d~--~~kW~~l~GI~~~~~~v~G~mQLYS~er-------~~sQ~ieGhaa~F~-- 203 (365)
T 2xzh_A 138 ---QPVKMFDRHSSLAGCQIINYRTDA--KQKWLLLTGISAQQNRVVGAMQLYSVDR-------KVSQPIEGHAASFA-- 203 (365)
T ss_dssp ---CCEEEEECCGGGTTCEEEEEEECT--TSCEEEEEEEEEETTEEEEEEEEEETTT-------TEEEEECCSEEEEE--
T ss_pred ---CCceeeecchhcccceEEEEEECC--CCCEEEEEeEeccCCccceeEEEEeecc-------cccceeeeeeeeeE--
Confidence 4555555432 3343333444 777655543 235677777764 45556666633221
Q ss_pred ccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 164 RKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 164 ~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.+-.++......+|+.+... ...++++|-++..
T Consensus 204 ----------~~~~~g~~~~~~lf~fa~r~--~~g~kLhIiEi~~ 236 (365)
T 2xzh_A 204 ----------QFKMEGNAEESTLFCFAVRG--QAGGKLHIIEVGT 236 (365)
T ss_dssp ----------EECCTTCSSCEEEEEEEEEE--TTEEEEEEEECSS
T ss_pred ----------EEecCCCCCCceEEEEEEec--CCCcEEEEEEcCC
Confidence 23333332223345544431 0015788888744
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=65.81 E-value=93 Score=29.54 Aligned_cols=116 Identities=16% Similarity=0.229 Sum_probs=66.3
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcc
Q 026295 17 WNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ 96 (240)
Q Consensus 17 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 96 (240)
.+|..+.+|.-. ..++.|||+. +-..+..+.- ..+|..-+|-.+ +.|+-.+ +..|.-|++....
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~-----~k~klks~~~-~e~VvfWkWis~---~~l~lVT-~~aVyHW~~~~~s----- 136 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIE-----MKSKMKAHTM-TDDVTFWKWISL---NTVALVT-DNAVYHWSMEGES----- 136 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehH-----Hhhhhccccc-CCCceEEEecCC---CeeEEEc-CCeEEEeccCCCC-----
Confidence 466666666654 5789999987 3333443332 356778888654 3344332 5689999996422
Q ss_pred cEEEEEeeec----cccEEeEEEeecCCCcEEEEEe-------CCCcEEEEEecCcccccceeEEeeeecccc
Q 026295 97 WKLCKSFEST----STQVLDVQFGVSSTSLKLVAAY-------SDGHVKVYELLDPLILKNWQLQAEFQNAID 158 (240)
Q Consensus 97 ~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~-------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
.+...|..| ...|-.-..++ +.++++..+ -.|.+.+|.... ...+.+.+|..
T Consensus 137 -~P~k~fdR~~~L~~~QIinY~~d~--~~kW~~l~gi~~~~~~v~G~mQLyS~er-------~~sQ~iegha~ 199 (1630)
T 1xi4_A 137 -QPVKMFDRHSSLAGCQIINYRTDA--KQKWLLLTGISAQQNRVVGAMQLYSVDR-------KVSQPIEGHAA 199 (1630)
T ss_pred -ccHHHHhcchhcccCeeEEeeeCC--CCCeEEEEeeccCCCcccceeeeeeccc-------ccchhhhHhHh
Confidence 344444333 23444444444 677665433 347778887764 44445555543
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=62.54 E-value=69 Score=26.89 Aligned_cols=78 Identities=8% Similarity=-0.062 Sum_probs=51.4
Q ss_pred EEEEEEcCCCCCCEEEEEe-cCCeEEEEEeeeccC----C--CcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCC
Q 026295 59 ILKVVWVPPEFGDAVACIC-SDGSLLLWEEIVEDA----Q--PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDG 131 (240)
Q Consensus 59 v~~~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~----~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 131 (240)
...+..+|+ |++++.++ .+.++.++|++.... . ..+=......+ ........+|.+ +|.-..+--.|.
T Consensus 325 PHGv~vsPD--Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~--~G~aYTtlfidS 399 (638)
T 3sbq_A 325 PHGCNTSSD--GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG--RGNAYTTLFIDS 399 (638)
T ss_dssp CCCEEECTT--SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS--SSEEEEEETTTT
T ss_pred CcceeeCCC--CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC--CCceEeeeeecc
Confidence 456788899 98877665 477999999874211 0 00001122222 345667889988 887666677899
Q ss_pred cEEEEEecCc
Q 026295 132 HVKVYELLDP 141 (240)
Q Consensus 132 ~v~iw~~~~~ 141 (240)
+|.-|++...
T Consensus 400 qvvkWni~~a 409 (638)
T 3sbq_A 400 QVVKWNMEEA 409 (638)
T ss_dssp EEEEEEHHHH
T ss_pred eEEEEeccHH
Confidence 9999999753
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.23 E-value=7.8 Score=35.26 Aligned_cols=37 Identities=19% Similarity=0.065 Sum_probs=29.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEe
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKT 52 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 52 (240)
.+.+++..++..++++-+.|+++|||++. +++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~-----t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-----TNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT-----TTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC-----CCCeEEee
Confidence 45566667788899999999999999998 55666654
No 348
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.14 E-value=21 Score=30.66 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=27.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEee
Q 026295 11 GTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTK 53 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 53 (240)
.|.++.+ +..+|++-+.|.++|+|++. +++++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~-----t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLT-----SFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETT-----TTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcC-----CCceEEeec
Confidence 4665555 47799999999999999998 566665554
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.49 E-value=74 Score=25.62 Aligned_cols=29 Identities=7% Similarity=0.095 Sum_probs=21.3
Q ss_pred ccEEEEEEcCCCCCC-EEEEEecCCeEEEEEe
Q 026295 57 GAILKVVWVPPEFGD-AVACICSDGSLLLWEE 87 (240)
Q Consensus 57 ~~v~~~~~~~~~~~~-~l~s~~~d~~v~iwd~ 87 (240)
.....|+|.|+ |. .++.+-..|.|++++.
T Consensus 14 ~~P~~~a~~pd--G~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGD--GSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSS--SSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCC--CCeEEEEEeCCceEEEEeC
Confidence 44668999998 75 3445567899998864
No 350
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=54.82 E-value=1.1e+02 Score=26.64 Aligned_cols=131 Identities=8% Similarity=-0.054 Sum_probs=66.9
Q ss_pred ccceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeee----cCccEEEEEEcCCCCCCEEEEEecCCe--
Q 026295 9 DKGTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKV----HAGAILKVVWVPPEFGDAVACICSDGS-- 81 (240)
Q Consensus 9 ~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~l~s~~~d~~-- 81 (240)
.+.|.+|+++|.. ..+..+...+-|...+=... +|+.+..... ....+.+|++.|.. ...+..+.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~---tW~~~~~~~~~~~~~~~~i~~ia~dp~~-~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTS---KWIPLNDFIEAQDMNIMGTESIALDPNN-PDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTT---EEEESCTTCCGGGGGGCSEEEEEEETTE-EEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCC---CeeECccCCCcccccCCceeEEEECCCC-CCEEEEEeCccCCC
Confidence 3589999999963 56666666666644432222 7776543111 12469999998751 233444332211
Q ss_pred --EEEEEeeeccCCCcccEEEEEeee------ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEe
Q 026295 82 --LLLWEEIVEDAQPLQWKLCKSFES------TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQA 151 (240)
Q Consensus 82 --v~iwd~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~ 151 (240)
-.||.-.. .+..|+.+..-.. ....+..++++|. +...+..+...+. ||-..... ..|+.+.
T Consensus 90 ~~~~v~~S~D---gG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~-~~~~v~~g~~~~g--l~~S~DgG--~TW~~~~ 159 (789)
T 1sqj_A 90 EWAAFYVSED---RGQSFTIYESPFPMGANDMGRNNGERLAVNPF-NSNEVWMGTRTEG--IWKSSDRA--KTWTNVT 159 (789)
T ss_dssp SCCEEEEESS---TTSEEEEEECSSCCCTTSTTTTSCCCEEEETT-EEEEEEEECSSSC--EEEESSTT--SSCEEET
T ss_pred cccEEEEECC---CCCcceeccCCcccCccCCCccceeEEEEcCC-CCCEEEEEeccCC--EEEECCCC--cccCCCc
Confidence 33443322 2366776643111 0113567888873 2344555553443 45444322 3366543
No 351
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=54.48 E-value=73 Score=24.68 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=71.6
Q ss_pred ceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCC-CCEEEEEecC---
Q 026295 11 GTTSSSWNYCGQRLATGS-------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEF-GDAVACICSD--- 79 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~~~d--- 79 (240)
.|...+.+++.+.++..+ -.|.+.+|..+.. ..+.+++|.+.-..+....... ..+|+.+...
T Consensus 153 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 153 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred eEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 577778888888766554 2377889998743 4456677766554444421101 1233333321
Q ss_pred CeEEEEEeeeccCCCccc-EEEEE-eee---ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 80 GSLLLWEEIVEDAQPLQW-KLCKS-FES---TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~-~~~~~-~~~---~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
+.++|-++.........+ +.... +-. ...---++..++ ....+..-+.-|.|++||+.+
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~--kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE--KHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET--TTTEEEEEETTSEEEEEETTT
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc--cCCEEEEEeCCcEEEEEEccc
Confidence 578888884431111111 11111 111 223445677777 677788889999999999998
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.09 E-value=78 Score=26.53 Aligned_cols=56 Identities=7% Similarity=0.003 Sum_probs=33.4
Q ss_pred EEEECCCCCEEEEEeCC------------CcEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEE
Q 026295 14 SSSWNYCGQRLATGSTD------------GTLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d------------~~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~ 76 (240)
.|+|++.|+++++-..+ ..+.+.+.. +++...-+.+ ...+++.++|+|+ ++.|...
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~-----~g~~~rf~~~P~gaE~TG~~fspD--g~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-----TGEIRRFMVGPIGCEVTGISFSPD--QKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT-----TCCEEEEEECCTTCEEEEEEECTT--SSEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCC-----CCeEEEEEeCCCCccCcCeeECCC--CCEEEEE
Confidence 58999999977765433 123333333 2233333332 3467999999998 7765543
No 353
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=51.41 E-value=1.2e+02 Score=26.29 Aligned_cols=158 Identities=13% Similarity=0.200 Sum_probs=75.1
Q ss_pred CccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCCCcccEEEEEeee----ccccEEeEEEeecCCCcEEEEEeCCC
Q 026295 56 AGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFES----TSTQVLDVQFGVSSTSLKLVAAYSDG 131 (240)
Q Consensus 56 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~~dg 131 (240)
.+.|..|.++|.. ...++.+...+.|...+ .+ +..|+.+..... ....+..|+++|. +...+.++..+.
T Consensus 14 ~g~i~~i~~~p~~-~~~~~a~~~~ggv~rS~--Dg---G~tW~~~~~~~~~~~~~~~~i~~ia~dp~-~~~~i~~~~g~~ 86 (789)
T 1sqj_A 14 GGYITGIVAHPKT-KDLLYARTDIGGAYRWD--AG---TSKWIPLNDFIEAQDMNIMGTESIALDPN-NPDRLYLAQGRY 86 (789)
T ss_dssp CSCEEEEEECSSS-TTCEEEEESSSCEEEEE--TT---TTEEEESCTTCCGGGGGGCSEEEEEEETT-EEEEEEEEECSC
T ss_pred CCcEEEEEECCCC-CCEEEEEecCCCEEEec--CC---CCCeeECccCCCcccccCCceeEEEECCC-CCCEEEEEeCcc
Confidence 4689999998862 34455666666553322 11 256776543221 2346899999873 223344443221
Q ss_pred c----EEEEEecCcccccceeEEeeeecccceeeccccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEee
Q 026295 132 H----VKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFD 207 (240)
Q Consensus 132 ~----v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~ 207 (240)
. -.||-..... ..|+.+.. ........+ +. ..+..++++|... ..+..+... + .||...
T Consensus 87 ~~~~~~~v~~S~DgG--~TW~~~~~-~~~~~~~~~-~~--~~~~~iav~p~~~----~~v~~g~~~-----~--gl~~S~ 149 (789)
T 1sqj_A 87 VGDEWAAFYVSEDRG--QSFTIYES-PFPMGANDM-GR--NNGERLAVNPFNS----NEVWMGTRT-----E--GIWKSS 149 (789)
T ss_dssp TTSSCCEEEEESSTT--SEEEEEEC-SSCCCTTST-TT--TSCCCEEEETTEE----EEEEEECSS-----S--CEEEES
T ss_pred CCCcccEEEEECCCC--CcceeccC-CcccCccCC-Cc--cceeEEEEcCCCC----CEEEEEecc-----C--CEEEEC
Confidence 1 3555554322 23554421 000000000 00 0112577777543 145555533 3 256665
Q ss_pred cCCCCcceeEeeecCCCCCCceEEEEEecC
Q 026295 208 EAHNRWLPVAELALPEDRSDEVYAVAWALN 237 (240)
Q Consensus 208 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 237 (240)
.+-..|.....+.....-...+..|.++|.
T Consensus 150 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~ 179 (789)
T 1sqj_A 150 DRAKTWTNVTSIPDAFTNGIGYTSVIFDPE 179 (789)
T ss_dssp STTSSCEEETTSCCCCSTTTCEEEEEECTT
T ss_pred CCCcccCCCccCccccCCCCCeEEEEECCC
Confidence 555667654322110001135778888774
No 354
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=43.85 E-value=1.3e+02 Score=24.44 Aligned_cols=155 Identities=15% Similarity=0.218 Sum_probs=88.0
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEecCCeEEEEEeeeccCC
Q 026295 14 SSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ 93 (240)
Q Consensus 14 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 93 (240)
+.-.+|..+.+|.-. ..++.|||++ +-..+..+.- ...|..-+|-.+ +.|+-.+ +..|.-|++....
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle-----~K~klks~~~-~e~VvfWkWis~---~~l~lVT-~taVyHWsi~~~s-- 136 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIE-----MKSKMKAHTM-TDDVTFWKWISL---NTVALVT-DNAVYHWSMEGES-- 136 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETT-----TTEEEEEEEC-SSCCCEEEEEET---TEEEEEC-SSEEEEEESSSSC--
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchH-----Hhhhhcceec-CCCceEEEecCC---CeEEEEc-CCeeEEecccCCC--
Confidence 344578788777765 5799999998 3345555543 356778888654 4444443 5789999986522
Q ss_pred CcccEEEEEeeecc----ccEEeEEEeecCCCcEEEEEe-------CCCcEEEEEecCcccccceeEEeeeecccceeec
Q 026295 94 PLQWKLCKSFESTS----TQVLDVQFGVSSTSLKLVAAY-------SDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTM 162 (240)
Q Consensus 94 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~-------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~v~~ 162 (240)
.+...|..|. ..|-.-..++ +.++++..+ -.|.+.+|..+. ...+.+.+|.....
T Consensus 137 ----~P~kvFdR~~~L~~~QIInY~~d~--~~kW~~l~GI~~~~~~v~G~mQLYS~er-------~~sQ~ieGhaa~F~- 202 (494)
T 1bpo_A 137 ----QPVKMFDRHSSLAGCQIINYRTDA--KQKWLLLTGISAQQNRVVGAMQLYSVDR-------KVSQPIEGHAASFA- 202 (494)
T ss_dssp ----CCEEEEECCGGGTTCEEEEEEECT--TSSEEEEEEEEEETTEEEEEEEEEESTT-------CCEEEECCSEEEEE-
T ss_pred ----CchhheecchhcccceEEEEEECC--CCCeEEEEeecccCCcccceEEEeeccc-------cccchheeeeeeeE-
Confidence 4555555432 3343344444 777665443 236677887764 44556666643322
Q ss_pred cccccceeeeEEEeCCCCCCCCceEEEEecCCCCCCCeEEEEEeec
Q 026295 163 FRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKVWEFDE 208 (240)
Q Consensus 163 ~~~~~~~~~~v~~~p~~~~~~~~~l~~~~~dd~~~~~~i~iw~~~~ 208 (240)
.+-.++......+|+.+... ...++++|-++..
T Consensus 203 -----------~~~~~g~~~~~~lf~fa~r~--~~g~kLhi~Ei~~ 235 (494)
T 1bpo_A 203 -----------QFKMEGNAEESTLFCFAVRG--QAGGKLHIIEVGT 235 (494)
T ss_dssp -----------EEECTTCSSEEEEEEEEECS--TTCCEEEEEECSC
T ss_pred -----------EEecCCCCCCceEEEEEEec--CCCcEEEEEEcCC
Confidence 12223322222244444432 1116888888754
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=39.68 E-value=1.3e+02 Score=23.17 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=52.9
Q ss_pred cceEEEEECC--CCCEEEEEeCCCc--EEEEeCCCCCCCcEEEEeE---eee--------cCccEEEEEEcCCC-CCCEE
Q 026295 10 KGTTSSSWNY--CGQRLATGSTDGT--LSIFDSPDPSSSSFTCNLK---TKV--------HAGAILKVVWVPPE-FGDAV 73 (240)
Q Consensus 10 ~~v~~~~~s~--~~~~l~~~~~d~~--i~iw~~~~~~~~~~~~~~~---~~~--------h~~~v~~~~~~~~~-~~~~l 73 (240)
..|.+|+++| .+.+.+.+ ..+. -.||.....+ .+++.+.. +.. ....|.++.+.|.. .+. +
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G-~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-l 131 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGG-GNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT-W 131 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTT-SCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC-E
T ss_pred CceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCC-CCceECCccccCCCcccccccccccceeEEEeCCCCCCCE-E
Confidence 4689999998 45555444 4440 1233332211 15555432 111 11257788887631 144 4
Q ss_pred EEEecCCeEEEEEeeeccCCCcccEEEEEeee----------------ccccEEeEEEeecCCCcEEEEEeCCC
Q 026295 74 ACICSDGSLLLWEEIVEDAQPLQWKLCKSFES----------------TSTQVLDVQFGVSSTSLKLVAAYSDG 131 (240)
Q Consensus 74 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~~~l~~~~~dg 131 (240)
..+...+.|. ....+ +..|+.+..... ....+..|.++|...+. +..+..++
T Consensus 132 ~~g~~~ggl~--~S~Dg---G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~-l~vg~~~g 199 (394)
T 3b7f_A 132 YAGTSPQGLF--RSTDH---GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH-LYIGMSSG 199 (394)
T ss_dssp EEEEETTEEE--EESST---TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC-EEEEEETB
T ss_pred EEEecCCcEE--EEcCC---CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE-EEEEECCC
Confidence 4444445443 22221 245665432210 12357788887632333 44444444
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.83 E-value=1.9e+02 Score=24.18 Aligned_cols=59 Identities=7% Similarity=0.006 Sum_probs=35.3
Q ss_pred ceEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCCCcEEEEeEeee-cCccEEEEEEcCCCCCCEEEEE
Q 026295 11 GTTSSSWNYCGQRLATGSTD------------GTLSIFDSPDPSSSSFTCNLKTKV-HAGAILKVVWVPPEFGDAVACI 76 (240)
Q Consensus 11 ~v~~~~~s~~~~~l~~~~~d------------~~i~iw~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~ 76 (240)
....|.|+++|.+.++.... ..|..++.. ++++...+.+ ....++.++|+|+ ++.|...
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~-----tGel~~fl~~P~~aEpnGiafSPD--~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-----TGEIRRFMVGPIGCEVTGISFSPD--QKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT-----TCCEEEEEECCTTCEEEEEEECTT--SSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC-----CCeEEEEEeCCCCccccCCEECCC--CCEEEEE
Confidence 35579999999887744321 134444443 2333333332 2356899999999 8776665
No 357
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=34.36 E-value=1.4e+02 Score=22.20 Aligned_cols=101 Identities=8% Similarity=0.002 Sum_probs=48.1
Q ss_pred EEECCCCCEEEEEe--CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCCCCEEEEEec-CCeEEEEEeeecc
Q 026295 15 SSWNYCGQRLATGS--TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEFGDAVACICS-DGSLLLWEEIVED 91 (240)
Q Consensus 15 ~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~ 91 (240)
..|++++++|+-.. .++.-.||.+...+. . ...+..+.. ..|++. ++.|.-.+. ...|..-++...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~---~~~lt~~~~----~~~~~~--g~~iy~t~~g~~~Iy~~~l~g~- 177 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE-E---KKKIKNHYL----FTCNTS--DRYFYYNNPKNGQLYRYDTASQ- 177 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC-C---CEEEESSCC----CCSEEE--TTEEEEECTTTCCEEEEETTTT-
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC-C---eEEEeCCCc----eEeeEE--CCEEEEEeCCCceEEEEECCCC-
Confidence 46788888888766 344444554432221 1 112222222 345566 676665544 345655555433
Q ss_pred CCCcccEEEEEeeeccccEEeEEEeecCCCcEEEEEeCCCcEEEEEe
Q 026295 92 AQPLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYEL 138 (240)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~ 138 (240)
.....+.+ ... ..++| ++.+|+-....+.-+|+-+
T Consensus 178 ------~~~~l~~~---~~~-~~~~P--~g~~iy~t~~~~~~~I~~~ 212 (302)
T 3s25_A 178 ------SEALFYDC---NCY-KPVVL--DDTNVYYMDVNRDNAIVHV 212 (302)
T ss_dssp ------EEEEEECS---CEE-EEEEE--ETTEEEEEEGGGTTEEEEE
T ss_pred ------CEEEEeCC---Ccc-ceeee--cCCEEEEEEcCCCcEEEEE
Confidence 22222222 111 23567 7777665554322334433
No 358
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.33 E-value=2.2e+02 Score=24.38 Aligned_cols=131 Identities=8% Similarity=-0.042 Sum_probs=67.1
Q ss_pred ceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCCCcEEEEeEeeec----CccEEEEEEcCCCCCCEEEEEec-C-----
Q 026295 11 GTTSSSWNYCG-QRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVH----AGAILKVVWVPPEFGDAVACICS-D----- 79 (240)
Q Consensus 11 ~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~-d----- 79 (240)
.|..|+++|.. ..+..+...+-|...+=... +++.+...... ...|..|++.|...+.+++..+. .
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~---tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTE---TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTT---EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCC---CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 79999999964 45555665566554443222 77765431111 24589999988522344444321 0
Q ss_pred CeEEEEEeeeccCCCcccEEEEEe-ee-----ccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecCcccccceeEEe
Q 026295 80 GSLLLWEEIVEDAQPLQWKLCKSF-ES-----TSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQA 151 (240)
Q Consensus 80 ~~v~iwd~~~~~~~~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~ 151 (240)
+...||.-..+ +..|+.+..- .. ....+..++++|.. ...+.++...| --+|-..... ..|+.+.
T Consensus 101 ~~~~l~~S~Dg---G~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~-~~~v~~g~~~g-~gl~~S~DgG--~tW~~~~ 171 (737)
T 2cn3_A 101 NMGAILRSTDR---GETWEKTILPFKMGGNMPGRSMGERLAIDPND-NRILYLGTRCG-NGLWRSTDYG--VTWSKVE 171 (737)
T ss_dssp CCCEEEEESSS---SSSCEEEECSSCCCTTSTTTTSCCCEEECSSC-TTCEEEECSTT-CCEEEESSTT--SSCEECT
T ss_pred CCccEEEeCCC---CCCcccCCCCcccCCCcCcccccceEEECCCC-CCEEEEeeccC-CcEEEeCCCC--cceeccc
Confidence 12345544322 3678776531 10 01134678998843 34455555332 1355444322 2355443
No 359
>3u12_A USP37 protein; structural genomics, PH-domain, hydrolase, structural genomi consortium, SGC; 2.08A {Homo sapiens}
Probab=31.73 E-value=1.1e+02 Score=20.02 Aligned_cols=11 Identities=9% Similarity=0.377 Sum_probs=8.5
Q ss_pred CcEEEEEecCc
Q 026295 131 GHVKVYELLDP 141 (240)
Q Consensus 131 g~v~iw~~~~~ 141 (240)
|.|+||+.+++
T Consensus 24 G~Vqiws~~tG 34 (141)
T 3u12_A 24 GPIRIRSMQTG 34 (141)
T ss_dssp EEEEEEETTTE
T ss_pred eeEEEEecCCC
Confidence 57999987764
No 360
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=30.92 E-value=2.2e+02 Score=23.21 Aligned_cols=123 Identities=10% Similarity=0.034 Sum_probs=73.5
Q ss_pred cceEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCCCCcEEEEeEeeecCccEEEEEEcCCCC-CCEEEEEecC--
Q 026295 10 KGTTSSSWNYCGQRLATGS-------TDGTLSIFDSPDPSSSSFTCNLKTKVHAGAILKVVWVPPEF-GDAVACICSD-- 79 (240)
Q Consensus 10 ~~v~~~~~s~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~~~d-- 79 (240)
..|...+.+++.+.++..+ -.|.+.+|..+.. ..+.+.+|.+.-..+....... ..+|..+...
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 3577778889988766543 2377889999743 3455667766555555422100 1234444332
Q ss_pred -CeEEEEEeeeccCCCccc-EEEEEee----eccccEEeEEEeecCCCcEEEEEeCCCcEEEEEecC
Q 026295 80 -GSLLLWEEIVEDAQPLQW-KLCKSFE----STSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLD 140 (240)
Q Consensus 80 -~~v~iwd~~~~~~~~~~~-~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 140 (240)
+.++|-++.........+ +....+. ....---++..++ ....+..-+.-|.|.+||+.+
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~--kygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE--KHDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET--TTTEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc--cCCEEEEEecCceEEEEeccc
Confidence 688888885431111112 1111111 1123445677877 777788889999999999998
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.48 E-value=2.9e+02 Score=23.13 Aligned_cols=58 Identities=10% Similarity=0.051 Sum_probs=30.7
Q ss_pred EEEEEcCCCCCCEEEEEecC----------CeEEEEEeeeccCCCcccEEEEEeee-ccccEEeEEEeecCCCcEEEE
Q 026295 60 LKVVWVPPEFGDAVACICSD----------GSLLLWEEIVEDAQPLQWKLCKSFES-TSTQVLDVQFGVSSTSLKLVA 126 (240)
Q Consensus 60 ~~~~~~~~~~~~~l~s~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~ 126 (240)
-.|.|+|. |.+++.-..+ +.-.+|-.....+ +..+-+.. ....++.++|+| +++.|++
T Consensus 479 DNL~fd~~--G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g-----~~~rf~~~P~gaE~TG~~fsp--Dg~tlfv 547 (592)
T 3zwu_A 479 DGLGFDKA--GRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-----EIRRFMVGPIGCEVTGISFSP--DQKTLFV 547 (592)
T ss_dssp EEEEECTT--CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC-----CEEEEEECCTTCEEEEEEECT--TSSEEEE
T ss_pred cceEECCC--CCEEEEecCCCcccccccccccceEEEEeCCCC-----eEEEEEeCCCCccCcCeeECC--CCCEEEE
Confidence 46889888 8876664332 1122333221111 22222222 347788999988 7765544
No 362
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=22.35 E-value=1.1e+02 Score=17.09 Aligned_cols=29 Identities=24% Similarity=0.264 Sum_probs=21.0
Q ss_pred eEEEEecCCCCCCCeEEEEEeecCCCCcceeEeee
Q 026295 186 SFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELA 220 (240)
Q Consensus 186 ~l~~~~~dd~~~~~~i~iw~~~~~~~~~~~~~~~~ 220 (240)
.|+.-- + +.|+||.++.......+.+++.
T Consensus 31 hFgv~e-~-----g~iKIykyde~tNeI~LkKE~~ 59 (72)
T 3kvp_A 31 HFGVME-D-----GYIKIYEYNESRNEVKLKKEYA 59 (72)
T ss_dssp EEEEEE-T-----TEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEe-C-----CEEEEEEeCCCCCeEEEEEeec
Confidence 566665 4 8999999988776666655543
Done!