Query 026297
Match_columns 240
No_of_seqs 198 out of 423
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 10:13:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026297.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026297hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2uyza1 d.20.1.1 (A:3-158) Ubi 54.7 14 0.001 27.7 6.4 49 22-70 20-68 (156)
2 d1fzya_ d.20.1.1 (A:) Ubiquiti 49.7 16 0.0012 26.8 5.9 36 35-70 28-63 (149)
3 d1jatb_ d.20.1.1 (B:) Ubiquiti 45.4 22 0.0016 26.2 6.1 36 35-70 34-69 (136)
4 d1zyma1 a.60.10.1 (A:22-144) E 44.1 15 0.0011 26.2 4.8 28 200-227 16-43 (123)
5 d1nkpa_ a.38.1.1 (A:) Myc prot 44.0 21 0.0016 24.0 5.4 37 200-236 51-87 (88)
6 d2awfa1 d.20.1.1 (A:7-131) Ubi 43.4 24 0.0017 25.1 5.9 36 35-70 26-61 (125)
7 d2e2ca_ d.20.1.1 (A:) Ubiquiti 43.1 20 0.0015 26.7 5.6 36 35-70 35-70 (156)
8 d1yf2a2 d.287.1.2 (A:221-425) 42.6 17 0.0013 26.0 5.0 31 200-230 158-188 (205)
9 d2f4za1 d.20.1.1 (A:32-192) Hy 41.9 24 0.0017 26.4 5.9 35 36-70 41-75 (161)
10 d1fxkc_ a.2.5.1 (C:) Prefoldin 39.9 22 0.0016 25.3 5.2 34 201-234 95-128 (133)
11 d2a4da1 d.20.1.1 (A:82-220) Ub 39.8 47 0.0034 24.2 7.2 37 34-70 34-70 (139)
12 d1yrva1 d.20.1.1 (A:1-148) Ubi 39.2 27 0.002 25.7 5.8 35 36-70 31-65 (148)
13 d1ydxa1 d.287.1.2 (A:1-193) Bi 37.0 24 0.0017 25.4 5.0 32 201-232 144-175 (193)
14 d2bepa1 d.20.1.1 (A:1-154) Ubi 35.5 36 0.0026 25.0 5.9 36 35-70 33-68 (154)
15 d1yf9a1 d.20.1.1 (A:13-170) Ub 35.1 28 0.002 26.0 5.3 35 36-70 23-57 (158)
16 d1pzva_ d.20.1.1 (A:) Ubiquiti 34.7 28 0.0021 25.7 5.2 34 36-69 28-61 (161)
17 d1ayza_ d.20.1.1 (A:) Ubiquiti 33.6 40 0.0029 24.4 5.9 34 36-69 30-63 (153)
18 d2azeb1 e.63.1.2 (B:201-301) T 33.5 29 0.0021 24.5 4.8 31 200-230 7-37 (101)
19 d1zdna1 d.20.1.1 (A:6-156) Ubi 33.3 38 0.0027 24.9 5.7 35 36-70 33-67 (151)
20 d1j7db_ d.20.1.1 (B:) Ubiquiti 32.9 40 0.0029 24.5 5.8 36 35-70 28-63 (149)
21 d1i7ka_ d.20.1.1 (A:) Ubiquiti 32.6 42 0.0031 24.5 5.9 35 35-69 27-61 (146)
22 d2z5da1 d.20.1.1 (A:23-174) Ub 32.3 27 0.002 25.7 4.7 35 36-70 26-60 (152)
23 d1z3da1 d.20.1.1 (A:2-150) Ubi 31.9 45 0.0033 24.2 5.9 35 36-70 30-64 (149)
24 d1ydxa2 d.287.1.2 (A:194-374) 31.8 33 0.0024 24.4 5.0 32 201-232 139-170 (181)
25 d2clyb1 f.53.1.1 (B:4-123) ATP 31.5 20 0.0015 26.2 3.7 24 213-236 97-120 (120)
26 d1nkpb_ a.38.1.1 (B:) Max prot 31.0 48 0.0035 21.8 5.5 36 200-235 46-81 (83)
27 d2fo3a1 d.20.1.1 (A:9-117) Put 30.4 51 0.0037 22.8 5.8 35 35-69 24-58 (109)
28 d2a7la1 d.20.1.1 (A:1-117) Ubi 29.9 68 0.005 22.1 6.5 36 35-70 31-66 (117)
29 d2ucza_ d.20.1.1 (A:) Ubiquiti 29.7 53 0.0038 24.1 6.1 35 35-69 30-64 (164)
30 d1yh2a1 d.20.1.1 (A:1-154) Ubi 29.6 46 0.0034 24.1 5.6 35 36-70 29-63 (154)
31 d1e43a1 b.71.1.1 (A:394-483) B 29.3 6.5 0.00047 27.9 0.4 14 79-92 66-79 (90)
32 d1fxka_ a.2.5.1 (A:) Prefoldin 29.2 39 0.0028 23.4 4.9 42 193-234 57-98 (107)
33 d1jata_ d.20.1.1 (A:) Ubiquiti 28.2 56 0.0041 23.8 5.9 36 35-70 29-64 (152)
34 d1ivsa1 a.2.7.3 (A:797-862) Va 27.8 39 0.0028 21.4 4.3 25 201-225 4-28 (66)
35 d1z2ua1 d.20.1.1 (A:1-147) Ubi 27.7 59 0.0043 23.2 5.9 36 35-70 27-62 (147)
36 d2d3na1 b.71.1.1 (A:399-485) B 27.4 7.3 0.00053 27.4 0.4 14 79-92 63-76 (87)
37 d1seta1 a.2.7.1 (A:1-110) Sery 26.3 53 0.0039 22.6 5.2 26 206-231 69-94 (110)
38 d1ivsa1 a.2.7.3 (A:797-862) Va 25.7 23 0.0017 22.7 2.8 21 213-233 2-22 (66)
39 d1ud2a1 b.71.1.1 (A:391-480) B 24.8 8.7 0.00063 27.2 0.4 14 79-92 66-79 (90)
40 d1y8xa1 d.20.1.1 (A:27-183) Ub 23.3 64 0.0047 23.7 5.5 35 35-70 28-62 (157)
41 d1uklc_ a.38.1.1 (C:) SREBP-2 21.1 82 0.006 19.5 4.9 33 201-233 26-58 (61)
42 d2clyb1 f.53.1.1 (B:4-123) ATP 20.6 53 0.0039 23.7 4.3 30 199-228 90-119 (120)
43 d1fxka_ a.2.5.1 (A:) Prefoldin 20.5 87 0.0064 21.4 5.4 35 200-234 71-105 (107)
44 d1nlwa_ a.38.1.1 (A:) Mad prot 20.5 93 0.0067 20.0 5.3 32 200-231 46-77 (79)
No 1
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=54.72 E-value=14 Score=27.67 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=34.5
Q ss_pred EccceEEcCCCCCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 22 YGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 22 yGn~a~~l~k~~~~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+|-.|.+.....+..+..+|.+-+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~ 68 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPS 68 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccC
Confidence 5666666654445568999999999987754433334788888888873
No 2
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=49.71 E-value=16 Score=26.82 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=28.7
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
++..+.|.+-+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 457889999999987765555566899999999984
No 3
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=45.40 E-value=22 Score=26.16 Aligned_cols=36 Identities=11% Similarity=0.222 Sum_probs=27.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+...++|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 34 d~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 69 (136)
T d1jatb_ 34 DITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPD 69 (136)
T ss_dssp CTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTT
T ss_pred CCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCC
Confidence 447999999999987765544455788888888874
No 4
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=44.12 E-value=15 Score=26.25 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLI 227 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~ 227 (240)
..|+.|+..|..++.++++.+++++...
T Consensus 16 ~~E~~rl~~A~~~~~~~L~~l~~~~~~~ 43 (123)
T d1zyma1 16 DQEVERFLSGRAKASAQLETIKTKAGET 43 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999988654
No 5
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.01 E-value=21 Score=23.95 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRS 236 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~~k~ 236 (240)
.+-+..|..-......+++.|+.+...+..++++|..
T Consensus 51 ~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~g 87 (88)
T d1nkpa_ 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLGG 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4556666666667777777888888888888877753
No 6
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=43.39 E-value=24 Score=25.13 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=27.2
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+.....|.+-+.|+.+..-..-+=++.|.+.+.|+.
T Consensus 26 ~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~ 61 (125)
T d2awfa1 26 DNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPL 61 (125)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcCC
Confidence 345788999999987765555566778888888874
No 7
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=43.13 E-value=20 Score=26.68 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=27.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++.+.|.+-+.|+.+.....-+=++.+.+-+.|+.
T Consensus 35 ~~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 70 (156)
T d2e2ca_ 35 GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPY 70 (156)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCcccEEEEEEEcCCccccCCCEEEEEEEecCCCCC
Confidence 357899999999988766655555788888888863
No 8
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=42.60 E-value=17 Score=25.96 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQ 230 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~ 230 (240)
.+|.++|.+...++++.|+.+++++..+++.
T Consensus 158 ~~eQ~~I~~~l~~id~~i~~~~~~~~~l~~~ 188 (205)
T d1yf2a2 158 LEEQKQIAKILSSVDKSIELKKQKKEKLQRM 188 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777777777777776654
No 9
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=41.91 E-value=24 Score=26.45 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=27.2
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
++...|.+.+.|+.+.....=+=++.+.+.+.|+.
T Consensus 41 ~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 57899999999987766544444888888888874
No 10
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=39.86 E-value=22 Score=25.28 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026297 201 DELLQLAAARQQVQAHIAKLKRQISLIDGQQQQL 234 (240)
Q Consensus 201 ~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~~ 234 (240)
.-++.|.....++.++++++++++..++.+++++
T Consensus 95 ~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 95 SQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3356666777777777777777777777776654
No 11
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=39.84 E-value=47 Score=24.15 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=27.6
Q ss_pred CCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 34 SEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 34 ~~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
.+....+|.+.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 34 ~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~ 70 (139)
T d2a4da1 34 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 70 (139)
T ss_dssp TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CcccccEEEEEEECCCCCchhcCEEEEEEECCCCCCC
Confidence 3457888999999988766555555677778888874
No 12
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=39.19 E-value=27 Score=25.73 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=27.0
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+..+.|.+-+.|+.+.....-+=++.+.+.+.|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999987665544444888888888874
No 13
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=37.01 E-value=24 Score=25.42 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 026297 201 DELLQLAAARQQVQAHIAKLKRQISLIDGQQQ 232 (240)
Q Consensus 201 ~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~ 232 (240)
+|.++|...-..+++.|+.++++++.+++..+
T Consensus 144 ~eQ~~I~~~l~~ld~~i~~~~~~i~~l~~~~~ 175 (193)
T d1ydxa1 144 NEQHAIANTLSVFDERLENLASLIEINRKLRD 175 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555666666666666666655443
No 14
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.46 E-value=36 Score=24.96 Aligned_cols=36 Identities=3% Similarity=-0.032 Sum_probs=27.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++...|.+-+.|+.+.....=+=++.+.+.+.|+.
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 68 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCChhheEeeEecCccccccCCeeEEEEeccccccC
Confidence 356778999999987765544445888889998873
No 15
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=35.10 E-value=28 Score=25.99 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=28.1
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+...+|.|-++|+.+.....-+=++.+.+-+.|+.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 57889999999998766654455788999999984
No 16
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=34.71 E-value=28 Score=25.71 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=26.3
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 69 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~ 69 (240)
...+.|.+-+.|+.+.--..-+=++.+.+.+.|+
T Consensus 28 ~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 28 NDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp TCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 4578999999998766655556678888888886
No 17
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=33.61 E-value=40 Score=24.37 Aligned_cols=34 Identities=9% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 69 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~ 69 (240)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCcccc
Confidence 4789999999998776554444578888888876
No 18
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.53 E-value=29 Score=24.54 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQ 230 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~ 230 (240)
++|+..|.+..+.+++.|..+.++|+.+-..
T Consensus 7 ~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 7 TQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6899999999999999999999999887643
No 19
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=33.35 E-value=38 Score=24.89 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=26.1
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 67 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPA 67 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCCC
Confidence 46788999999987755544556677888888873
No 20
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=32.86 E-value=40 Score=24.54 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=26.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++...|.+-+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 28 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 63 (149)
T d1j7db_ 28 ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 63 (149)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCcccEeeeEEECCcccccCCCEEEEEEecCCcccC
Confidence 357778999999987665544444888888888874
No 21
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=32.56 E-value=42 Score=24.46 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=26.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 69 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~ 69 (240)
++..+.|.+-+.|+.+.....-+=++.+.+.+.|+
T Consensus 27 ~~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 61 (146)
T d1i7ka_ 27 SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61 (146)
T ss_dssp TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCccccccCCEEEEEEEecCCCC
Confidence 35799999999998775544344477888888886
No 22
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=32.35 E-value=27 Score=25.66 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=26.4
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
++.++|.|.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 26 ~~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 26 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 46789999999987765544455788888888874
No 23
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=31.89 E-value=45 Score=24.19 Aligned_cols=35 Identities=9% Similarity=0.193 Sum_probs=27.8
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+....|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~ 64 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 64 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCC
Confidence 57889999999987766655556888999999974
No 24
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=31.81 E-value=33 Score=24.44 Aligned_cols=32 Identities=6% Similarity=0.058 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 026297 201 DELLQLAAARQQVQAHIAKLKRQISLIDGQQQ 232 (240)
Q Consensus 201 ~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~ 232 (240)
+|..+|..--..+++.|+.+++++..+++..+
T Consensus 139 ~eQ~~I~~~l~~~d~~i~~~~~~i~~l~~lk~ 170 (181)
T d1ydxa2 139 QLQRKAGKIVFLLDQKLDQYKKELSSLTVIRD 170 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666666777788888777777766543
No 25
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.50 E-value=20 Score=26.21 Aligned_cols=24 Identities=13% Similarity=0.293 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccc
Q 026297 213 VQAHIAKLKRQISLIDGQQQQLRS 236 (240)
Q Consensus 213 V~~~i~~lk~~l~~~e~~~~~~k~ 236 (240)
+.+-+++.+.+++.++.+|+.||+
T Consensus 97 ~~~~~~~s~~rI~~lekeLe~iks 120 (120)
T d2clyb1 97 CAEFLTQSKTRIQEYEKELEKMRN 120 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 333444444445555555555553
No 26
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.03 E-value=48 Score=21.75 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLR 235 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~~k 235 (240)
.+-|..|..-.....++++.|+++...+..++++|+
T Consensus 46 ~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 81 (83)
T d1nkpb_ 46 TEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344556666666777788888888888888887765
No 27
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=30.41 E-value=51 Score=22.75 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=23.5
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 69 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~ 69 (240)
++..++|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 24 ~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 58 (109)
T d2fo3a1 24 PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYP 58 (109)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCchhhhcCCCceEEEEeccccC
Confidence 34678999999998765443334456666666665
No 28
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.88 E-value=68 Score=22.14 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=25.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++...|.+-+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 31 ~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 66 (117)
T d2a7la1 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 66 (117)
T ss_dssp CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTT
T ss_pred CCCceEEEEEEeCCCCccccCCeeeEEEecCccccc
Confidence 457889999999987755444444677777777764
No 29
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=29.74 E-value=53 Score=24.12 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=26.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 69 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~ 69 (240)
+++...|.+-+.|+.+..-..=+=++.+.+.+.|+
T Consensus 30 e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP 64 (164)
T d2ucza_ 30 ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYP 64 (164)
T ss_dssp SSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred ccchhhhheeeeCCCcccccCCeeEEEEecCCCCC
Confidence 34678899999998776554445577778888887
No 30
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=29.60 E-value=46 Score=24.09 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=27.5
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 36 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 36 ~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+....|.+.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~ 63 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCccccC
Confidence 56789999999988766655566788888888863
No 31
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=29.27 E-value=6.5 Score=27.89 Aligned_cols=14 Identities=43% Similarity=1.222 Sum_probs=11.8
Q ss_pred CcEEEeeeEEeEEE
Q 026297 79 PFELSESGWGEFEI 92 (240)
Q Consensus 79 PFevtE~GWGeF~I 92 (240)
+=.|.|.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 45678999999987
No 32
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.21 E-value=39 Score=23.37 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=23.6
Q ss_pred hhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026297 193 WFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQL 234 (240)
Q Consensus 193 ~f~~~~e~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~~ 234 (240)
.|-..+-.+-+..|..-...+..+|+.|.++++.++.+++.+
T Consensus 57 vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~ 98 (107)
T d1fxka_ 57 ILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEM 98 (107)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444445555555666666666666666666655544
No 33
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=28.16 E-value=56 Score=23.84 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=28.2
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++...|.+.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 64 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPM 64 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCCC
Confidence 358899999999987766555566788888888873
No 34
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.78 E-value=39 Score=21.43 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 026297 201 DELLQLAAARQQVQAHIAKLKRQIS 225 (240)
Q Consensus 201 ~el~~l~~a~~~V~~~i~~lk~~l~ 225 (240)
.|+.||..-..+++.+|+.+..+|.
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~kL~ 28 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQRKLA 28 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5677777777777777777766654
No 35
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=27.70 E-value=59 Score=23.24 Aligned_cols=36 Identities=6% Similarity=0.103 Sum_probs=27.4
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
+++...|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 27 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 62 (147)
T d1z2ua1 27 GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62 (147)
T ss_dssp TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhhhhheecCCCCCCcCCCceEEEEecCcCCCC
Confidence 347889999999987766655555788888888873
No 36
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=27.42 E-value=7.3 Score=27.45 Aligned_cols=14 Identities=29% Similarity=1.021 Sum_probs=11.3
Q ss_pred CcEEEeeeEEeEEE
Q 026297 79 PFELSESGWGEFEI 92 (240)
Q Consensus 79 PFevtE~GWGeF~I 92 (240)
+=.|.|.|||+|.+
T Consensus 63 ~V~id~~G~g~F~v 76 (87)
T d2d3na1 63 TVTINADGWGNFSV 76 (87)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34577999999987
No 37
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=26.35 E-value=53 Score=22.55 Aligned_cols=26 Identities=12% Similarity=0.184 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026297 206 LAAARQQVQAHIAKLKRQISLIDGQQ 231 (240)
Q Consensus 206 l~~a~~~V~~~i~~lk~~l~~~e~~~ 231 (240)
|.+.-..+.++|..+..+++.++.++
T Consensus 69 l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 69 LIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444444443
No 38
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=25.69 E-value=23 Score=22.65 Aligned_cols=21 Identities=5% Similarity=0.139 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 026297 213 VQAHIAKLKRQISLIDGQQQQ 233 (240)
Q Consensus 213 V~~~i~~lk~~l~~~e~~~~~ 233 (240)
|.+|+++|.++|..++.+++.
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~ 22 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAER 22 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555443
No 39
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=24.83 E-value=8.7 Score=27.19 Aligned_cols=14 Identities=36% Similarity=0.888 Sum_probs=11.3
Q ss_pred CcEEEeeeEEeEEE
Q 026297 79 PFELSESGWGEFEI 92 (240)
Q Consensus 79 PFevtE~GWGeF~I 92 (240)
+=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~V 79 (90)
T d1ud2a1 66 SVTINGDGWGEFFT 79 (90)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34567999999987
No 40
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]}
Probab=23.33 E-value=64 Score=23.69 Aligned_cols=35 Identities=3% Similarity=-0.049 Sum_probs=23.0
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 026297 35 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 70 (240)
Q Consensus 35 ~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~n 70 (240)
++..+.|.+.+ |+.+.....-+=++.+.+.+.|+.
T Consensus 28 ~~~l~~w~~~i-~p~~t~Y~gg~f~~~i~fp~~YP~ 62 (157)
T d1y8xa1 28 PDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPH 62 (157)
T ss_dssp TTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTT
T ss_pred CCcceEEEEEE-CCCCCCcCCCeEEEEEEecCCCCC
Confidence 35788999988 655444444455566666788763
No 41
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.11 E-value=82 Score=19.54 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 026297 201 DELLQLAAARQQVQAHIAKLKRQISLIDGQQQQ 233 (240)
Q Consensus 201 ~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~ 233 (240)
.-|.+-....+.+++++..|+.+...+..+.+.
T Consensus 26 ~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~ 58 (61)
T d1uklc_ 26 GVLRKAIDYIKYLQQVNHKLRQENMVLKLANQK 58 (61)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666677777777777777776666554
No 42
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.56 E-value=53 Score=23.71 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026297 199 EADELLQLAAARQQVQAHIAKLKRQISLID 228 (240)
Q Consensus 199 e~~el~~l~~a~~~V~~~i~~lk~~l~~~e 228 (240)
|.+-+..+.+..+.++++|++|.++|..++
T Consensus 90 e~e~~~~~~~~~~~s~~rI~~lekeLe~ik 119 (120)
T d2clyb1 90 EKEDVKSCAEFLTQSKTRIQEYEKELEKMR 119 (120)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 355567778888899999999999998765
No 43
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.50 E-value=87 Score=21.36 Aligned_cols=35 Identities=9% Similarity=0.203 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQL 234 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~~~~ 234 (240)
.+.++.|....+.+...+..+.+++..+...++.+
T Consensus 71 ~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~ 105 (107)
T d1fxka_ 71 QEKLETLQLREKTIERQEERVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788888888888888888888888776643
No 44
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.49 E-value=93 Score=19.99 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026297 200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQ 231 (240)
Q Consensus 200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~ 231 (240)
.+-+..|.........+++.|+.+...+..++
T Consensus 46 ~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 46 KLHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444555555555555555554444
Done!