BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026301
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P77938|NADC_RHORU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Rhodospirillum rubrum GN=nadC PE=3 SV=1
Length = 296
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 95 PSHPT-----YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIAL 149
P+HP + + V+ ALAED G GD+T ATIP A F+A++ GI+AG+
Sbjct: 3 PNHPVAALSPFAIDEAVRRALAEDLGRAGDITSTATIPAATRAHARFVARQPGILAGLGC 62
Query: 150 AEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 209
A F +D ++ L+DG + G +V+G A +I+ AER LNF+ +SGIAT
Sbjct: 63 ARSAFALLDDTVTFTTPLEDGAEIAAGQTVAEVAGAARTILAAERTALNFLGHLSGIATR 122
Query: 210 TRAMAD-LAHP-ATILETRKTAPTLRLLDKWAV 240
TR D +AH A + TRKT P LR L+K+AV
Sbjct: 123 TRRFGDAIAHTRARLTCTRKTTPGLRGLEKYAV 155
>sp|P30819|NADC_PSEAE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=nadC PE=3 SV=2
Length = 282
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 94 LPSHPTYDLKGV----VKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIAL 149
+P+ DL+G V+ ALAED G GD+T P E EA + +E IAG A
Sbjct: 1 MPNLTLADLQGEIQANVRTALAEDVGG-GDLTAQLIDP-QREAEARVITREHATIAGRAW 58
Query: 150 AEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 209
+ +F +VDP + V W ++DG V ++ G A +++ ER LNF+Q +SG AT
Sbjct: 59 VDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATR 118
Query: 210 TRAMADLAHPATI--LETRKTAPTLRLLDKWAV 240
++ ADL + L+TRKT P LRL K+AV
Sbjct: 119 SQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAV 151
>sp|P74301|NADC_SYNY3 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=nadC
PE=3 SV=1
Length = 295
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 8/134 (5%)
Query: 110 LAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKD 169
LAED G RGD + + L +A ++AKE+G+IAG+ +A IF +DPS++ + +
Sbjct: 29 LAEDIG-RGDWSTQG-LGLQHRGQARWVAKENGVIAGLPMAARIFQLLDPSMEFQVLAGE 86
Query: 170 GDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTR----AMADLAHPATILET 225
G V ++G S++ ERV LN + +SGIAT+TR A+AD +P ++T
Sbjct: 87 GQAVTASTVVATMAGNLGSLLTGERVALNLVMGLSGIATMTRQYVQAIAD--YPTRFVDT 144
Query: 226 RKTAPTLRLLDKWA 239
RKT P LR+L+K+A
Sbjct: 145 RKTTPGLRVLEKYA 158
>sp|P39666|NADC_BACSU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Bacillus subtilis (strain 168) GN=nadC PE=1 SV=2
Length = 289
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 102 LKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSL 161
LK ++ ED G GD+T +I + EA +AK +GI AG A+ + F +D ++
Sbjct: 6 LKKLLNHFFLEDIG-TGDLTSQ-SIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENV 63
Query: 162 KVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHP 219
+ KDGD +HKG ++ G A +++ ERVVLN +QR+SGIAT+TR
Sbjct: 64 QSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQ 123
Query: 220 ATILETRKTAPTLRLLDKWAV 240
I +TRKT P LR+L+K+AV
Sbjct: 124 IKICDTRKTTPGLRMLEKYAV 144
>sp|O27860|NADC_METTH Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=nadC PE=3 SV=1
Length = 279
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 119 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQ 178
D+T A I V A +++E+G++AG+ +AEM+ E S+ + W DGD + G +
Sbjct: 17 DITTEALIDRGTRVVADIVSREEGVVAGVEVAEMMAREFSISI-IRWK-DDGDPLSGGER 74
Query: 179 FGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRL 234
+ G A I++ ER +LN M +MSGIATLTR+M A I TRKT P L+
Sbjct: 75 VLTLEGDAMDILMVERTMLNLMMKMSGIATLTRSMLQRARAVNEGIRIAATRKTTPGLQW 134
Query: 235 LDKWAV 240
+K AV
Sbjct: 135 FEKQAV 140
>sp|P46714|NADC_MYCLE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium leprae (strain TN) GN=nadC PE=3 SV=1
Length = 284
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 103 KGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPS 160
+ ++ AL ED D+T AT+P V + +E G+IAG+ +A ++ EV
Sbjct: 11 RDTIRRALHEDLRYGLDITTQATVPAGTVVTGSMVPREPGVIAGVDVALLVLDEVFGVDG 70
Query: 161 LKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH-- 218
+V + ++DG + G V A ++ AER +LN + MSGIAT+T A D
Sbjct: 71 YRVLYRVEDGARLQSGQPLLTVQAAARGLLTAERTMLNLVCHMSGIATVTVAWVDAVRGT 130
Query: 219 PATILETRKTAPTLRLLDKWAV 240
A I +TRKT P LR L K+AV
Sbjct: 131 KAKIRDTRKTLPGLRALQKYAV 152
>sp|A7SG73|NADC_NEMVE Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Fragment)
OS=Nematostella vectensis GN=qprt PE=3 SV=1
Length = 289
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+A L K DG++AG+ IF ++D KVEW +GD + G V+G + I++
Sbjct: 47 KAVLLCKSDGVLAGVPFFNAIFEKLD--CKVEWQNNEGDPIKAVSVIGTVTGPVNKILLG 104
Query: 193 ERVVLNFMQRMSGIATLTRAMADLAHP----ATILETRKTAPTLRLLDKWAV 240
ERV LN + R SGIAT +R++ +L I TRKT P R+++K+A+
Sbjct: 105 ERVALNCISRASGIATKSRSLTNLKEQYQWHGEIAGTRKTTPGFRVVEKYAL 156
>sp|P43619|NADC_YEAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BNA6 PE=1 SV=1
Length = 295
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 186
EA+ K+DG++ G+ A+ +F++ + L+VEW K+G + + K++G A
Sbjct: 42 EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 99
Query: 187 HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 240
+I++AER LN + R SGIAT + + LA + TI TRKT P LR L+K+++
Sbjct: 100 KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 157
>sp|P30012|NADC_SALTY Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=nadC PE=1 SV=3
Length = 297
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 101 DLKGVVKLALAEDAG---DRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV 157
D+ V AL ED G D G+ +P D + A + +EDG+ G E +F ++
Sbjct: 22 DIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQL 81
Query: 158 -DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 216
+++ W + DGD +H +++G A ++ ER LNF+Q +SG+A+ R L
Sbjct: 82 AGDDVRLTWHVDDGDAIHANQTVFELNGPARVLLTGERTALNFVQTLSGVASEVRRYVGL 141
Query: 217 --AHPATILETRKTAPTLRLLDKWAV 240
+L+TRKT P LR K+AV
Sbjct: 142 LAGTQTQLLDTRKTLPGLRTALKYAV 167
>sp|O28439|NADC_ARCFU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=nadC PE=3 SV=1
Length = 258
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 118 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 177
GDVT + T +VEA ++K +G++AG+ + +++F + + V S KDG+ + G
Sbjct: 4 GDVTAIPT----KDVEAVIVSKGEGVLAGVGVVKILFDLAE--IVVMESKKDGEPIKPGD 57
Query: 178 QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLA---HPATIL-ETRKTAPTLR 233
++ G++ SI+ ER+ +N + RMSGIAT T M + A +P ++ TRKT P R
Sbjct: 58 VVMRLRGKSDSILATERLAINILMRMSGIATATAKMVERARRVNPKVVVAATRKTTPGFR 117
Query: 234 LLDKWAV 240
+ +K AV
Sbjct: 118 IFEKMAV 124
>sp|O06594|NADC_MYCTU Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium tuberculosis GN=nadC PE=1 SV=1
Length = 285
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 119 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 176
DVT +AT+P A + +E G++AG+ +A + +EV +V ++DG V G
Sbjct: 28 DVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPG 87
Query: 177 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 234
+ + ++ AER +LN + +SGIAT T A D A I +TRKT P LR
Sbjct: 88 EALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRA 147
Query: 235 LDKWAV 240
L K+AV
Sbjct: 148 LQKYAV 153
>sp|P30011|NADC_ECOLI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Escherichia coli (strain K12) GN=nadC PE=3 SV=7
Length = 297
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 101 DLKGVVKLALAEDAGDRGDVTCMAT---IPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV 157
D+ G V AL ED G D T +P + A + +E+G+ G E +F ++
Sbjct: 22 DIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQL 81
Query: 158 -DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 216
+ + W + DGD ++ ++ G + ++ ER LNF+Q +SG+A+ R +L
Sbjct: 82 AGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVEL 141
Query: 217 AHPAT--ILETRKTAPTLRLLDKWAV 240
+L+TRKT P LR K+AV
Sbjct: 142 LEGTNTQLLDTRKTLPGLRSALKYAV 167
>sp|Q3T063|NADC_BOVIN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Bos
taurus GN=QPRT PE=2 SV=1
Length = 299
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+A AK G++AG + IF +V+ +V W L +G + + +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFLDAIFAQVN--CQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLG 100
Query: 193 ERVVLNFMQRMSGIATLTRAMADLAH----PATILETRKTAPTLRLLDKWAV 240
ERV LN + R SG+A++ A + A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGVASMAAAAVETARGTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q57916|NADC_METJA Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=nadC PE=3
SV=1
Length = 283
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 100 YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDP 159
Y LK ++K +L D G GD+T + IP ++ + AKE I+ GI F E
Sbjct: 5 YALK-ILKKSLEYDVG-FGDITTNSIIPEGVKAKGVIKAKEKCIVCGIDFIVAFFEEY-- 60
Query: 160 SLKVEWSLKDGDHVHKG-LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH 218
+K + DG+ + L+F G A +I++ ER LN + +SGIAT+T + A
Sbjct: 61 GIKCKKLFNDGEEAYGNILEF---EGDARTILMLERTALNLLMHLSGIATMTNRIVKKAK 117
Query: 219 PAT----ILETRKTAPTLRLLDKWAV 240
+ TRKT P L L K+AV
Sbjct: 118 SVNKNVRVACTRKTLPLLSPLQKYAV 143
>sp|Q91X91|NADC_MOUSE Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Mus
musculus GN=Qprt PE=2 SV=1
Length = 299
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWFLPEGSKLVPVVKVAEVKGPAHHLLLG 100
Query: 193 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 240
ERV LN + R SGIA+ ++A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVARSTGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|O25909|NADC_HELPY Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=nadC PE=1 SV=1
Length = 273
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 101 DLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAG----IALAEMIFHE 156
+++ ++ AL ED G GD+ + D + A AK++G+ +G + L EM E
Sbjct: 2 EIRTFLERALKEDLG-HGDL-FERVLEKDFKATAFVRAKQEGVFSGEKYALELLEMTGIE 59
Query: 157 VDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 216
++K + K D ++ G ++ ER +LN +Q SGIATLT +
Sbjct: 60 CVQTIKDKERFKPKD------ALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEA 113
Query: 217 --AHPATILETRKTAPTLRLLDKWAV 240
+H +L+TRKT P LR+ +K++V
Sbjct: 114 LNSHKVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q75JX0|NADC_DICDI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Dictyostelium discoideum GN=qprt PE=3 SV=1
Length = 300
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 98 PTYDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV 157
P + ++ ++K L ED C+ + D +V AH L K++G+ +G + IF+++
Sbjct: 8 PKFKIEKIIKEWLEEDIPSFDYGGCV--VGSDEKV-AHLLGKQNGVFSGSIFFQEIFNQL 64
Query: 158 DPSLKVEWSLKDGDHV--------HKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 209
KV W +KDG+ +K V G +I+I ER+ LN + R GI T
Sbjct: 65 --GCKVIWFIKDGESFSMTHGPEKNKPQVLAHVIGPVRNILIGERLSLNILSRSCGITTQ 122
Query: 210 TRAMADLAH-----------PATILETRKTAPTLRLLDKWAV 240
+ L I TRKT P RL++K A+
Sbjct: 123 GYNVKKLVDGDNEQQQQQPWKGKIAGTRKTTPGFRLVEKLAL 164
>sp|Q9ZJN2|NADC_HELPJ Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain J99) GN=nadC PE=3 SV=1
Length = 273
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 101 DLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPS 160
++K ++ AL ED G GD+ + D + A AK++G+ +G A +
Sbjct: 2 EIKTFLECALKEDLG-HGDL-FERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMT--G 57
Query: 161 LKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT-RAMADLAHP 219
++ ++KD + ++ G ++ ER +LN +Q SGIATLT R + L P
Sbjct: 58 IECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSP 117
Query: 220 AT-ILETRKTAPTLRLLDKWAV 240
+L+TRKT P LR+ +K++V
Sbjct: 118 KVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q5I0M2|NADC_RAT Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rattus
norvegicus GN=Qprt PE=2 SV=1
Length = 299
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWLLPEGSKLVPVVKVAEVRGPAHHLLLG 100
Query: 193 ERVVLNFMQRMSGI----ATLTRAMADLAHPATILETRKTAPTLRLLDKWAV 240
ERV LN + R SGI AT + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVATSTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Homo
sapiens GN=QPRT PE=1 SV=3
Length = 297
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 133 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+A AK G++AG + IF +++ +V W L +G + + +V G AH +++
Sbjct: 43 QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 100
Query: 193 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 240
ERV LN + R SGIA+ A + A A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q9CLU4|MODD_PASMU Putative pyrophosphorylase ModD OS=Pasteurella multocida (strain
Pm70) GN=modD PE=3 SV=1
Length = 282
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 117 RGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG 176
RGD+T A + E F K GI+AGI++AE + ++D +V +K+G+ V G
Sbjct: 19 RGDLTTHALGLESIPAEICFKRKNAGIVAGISIAEKLLRKLDIHPQV--YVKEGEFVEAG 76
Query: 177 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAPTL 232
G A + A +VV ++ G+A T M A +PA ++ TRK+ P
Sbjct: 77 SLLLSAKGSADKLHQAWKVVQLVLEWSCGVAQYTAEMISNAKAINPAAVVACTRKSIPNT 136
Query: 233 RLLDKWAV 240
R L AV
Sbjct: 137 RKLATNAV 144
>sp|Q57278|MODD_HAEIN Putative pyrophosphorylase ModD OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=modD PE=3 SV=1
Length = 281
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 117 RGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVD--PSLKVEWSLKDGDHVH 174
RGD+T A ++ + F K G++AG+++AE + ++D P L V K+G+ V
Sbjct: 19 RGDLTTHALSIENIPAKILFKRKNAGVVAGVSVAEKLLKKLDIQPHLYV----KEGEWVE 74
Query: 175 KGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAP 230
G G + + A +VV ++ G+A T M A +P ++ TRK+ P
Sbjct: 75 SGALLISAEGMSEQLHQAWKVVQLVLEWSCGVAQYTAEMIANAKSVNPTAVVACTRKSIP 134
Query: 231 TLRLLDKWAV 240
R L AV
Sbjct: 135 NTRKLATNAV 144
>sp|Q0BV22|MRAY_GRABC Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=mraY
PE=3 SV=1
Length = 362
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 16 FPLFPGLLIW-QSSHSCGQVIIEALLSAHLIGASERALMPGIL-----SISTLVWPHLCT 69
F L P L+ W +S GQ I E HL+ M G+L ISTL+W L
Sbjct: 38 FLLGPALIRWLKSVQRGGQPIREDGPERHLLEKKGTPTMGGVLILAATGISTLLWTDLRN 97
Query: 70 NSRQVVKMSATGIRKPGFESPAIKLPSHPTYDLKGVVKL 108
V + G GF +KL T L G VKL
Sbjct: 98 GYVWAVLLLTLGYGGIGFADDYLKLSKRNTKGLPGRVKL 136
>sp|Q8D6Q0|ALR2_VIBVU Alanine racemase 2 OS=Vibrio vulnificus (strain CMCP6) GN=alr2 PE=3
SV=1
Length = 408
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 34/165 (20%)
Query: 28 SHSCGQVIIEALLSAHLIGASERALMPGILSISTLVWPHLCTNSRQVVKMSATGIRKPGF 87
SH Q I A++ A G R LMP IL P + S K+ +R+ GF
Sbjct: 62 SHIAPQTKICAVMKADAYGNGIRGLMPTILEQQI---PCVAIASNAEAKL----VRESGF 114
Query: 88 ESPAIKLPSHPTYDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGI 147
E I++ S T +++ + L + E G E +A LA
Sbjct: 115 EGELIRVRSASTSEIEQALSLDIEELIGS--------------EQQARELA--------- 151
Query: 148 ALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 192
+LAE + ++KV +L DG G+ G ++ IA
Sbjct: 152 SLAE----KYSKTIKVHLALNDGGMGRNGIDMSTERGPKEAVAIA 192
>sp|A8MH14|AROC_ALKOO Chorismate synthase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=aroC PE=3 SV=1
Length = 384
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 97 HPTYDLKGVVKLALAEDAGDR-GDV--TCMATIPLDMEVEAHFLAKEDGIIAGIALAEMI 153
+PT + + + ++ A++ GD G V + +P+ + AHF K DGI+A ++
Sbjct: 189 NPTIEERMMGEIQRAKETGDSLGGVFEVIVRNVPIGIGSYAHFDRKLDGILAQGLMSLQA 248
Query: 154 FHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAH 187
V+ +E S K G H +++ + G H
Sbjct: 249 IKAVEIGNGIEGSSKMGSQFHDEIKYSEAKGYYH 282
>sp|O13986|YEG4_SCHPO Uncharacterized protein C26H5.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26H5.04 PE=4 SV=3
Length = 789
Score = 32.0 bits (71), Expect = 4.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 52 LMPGILSISTLVWPHLCTNSRQVVKMSATGIRKPGFESPAIKLPSHPTYDLKGVVKLAL 110
L+ GI ++WP CT+ Q K A+ ++ GF L +H + D++ VK AL
Sbjct: 724 LLAGIWLCINILWPKQCTSPSQEDKERASILQNLGFGECLQMLQNHSSPDVRERVKDAL 782
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,223,824
Number of Sequences: 539616
Number of extensions: 3392927
Number of successful extensions: 9166
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9117
Number of HSP's gapped (non-prelim): 28
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)