BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026304
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81263|KITH_ORYSJ Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2
Length = 271
Score = 325 bits (833), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 151/197 (76%), Positives = 174/197 (88%), Gaps = 1/197 (0%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNG-RNIAMIKSSKDTRYAIDSVVTHDGAKLPCW 89
GEIHVI+GPMFAGKTTALLRR++ E+ G RN+A+IKS KD RY +DSVVTHDG K+PCW
Sbjct: 67 GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCW 126
Query: 90 ALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
ALPEL+SF+ KLG +AY K+DVIGIDEAQFF+DL++FCC AAD DGK VVVAGLDGDY R
Sbjct: 127 ALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDYKR 186
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHYV 209
FGSVLDIIPLAD+VTKLTARCELCG+RAFFTLRKT ET+TE+IGGADVYMPVCRQHY+
Sbjct: 187 NKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMPVCRQHYL 246
Query: 210 NGQVVIGAARNVLEFHK 226
+GQ+VI A R VL+ K
Sbjct: 247 DGQIVIEATRIVLDLEK 263
>sp|P04047|KITH_CHICK Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=3 SV=1
Length = 224
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 115/188 (61%), Gaps = 12/188 (6%)
Query: 24 GLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG 83
G P R G+I VI GPMF+GK+T L+RR+R ++K +KDTRY V THD
Sbjct: 12 GSPGRPRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDR 71
Query: 84 AKL---PCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVV 140
+ P AL ++ +++ LG VIGIDE QFF D+ EFC A+ GKTV+V
Sbjct: 72 NTMEARPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMAN-TGKTVIV 122
Query: 141 AGLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVY 200
A LDG + R++FGS+L+++PLA++V KL A C C + A +T R E E E+IGGAD Y
Sbjct: 123 AALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKY 182
Query: 201 MPVCRQHY 208
VCR Y
Sbjct: 183 HSVCRACY 190
>sp|P23335|KITH_SWPVK Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1
Length = 177
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 6/179 (3%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G IH+I+GPMF+GK+T L+R + N +IK SKD RY D+V THD + +
Sbjct: 4 GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLRR 150
L + L D +D++GIDE QFF D+ EFC A+ GK V+VA LDG Y R+
Sbjct: 64 TDSLFDIKDTLDD-----VDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 117
Query: 151 SFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHYV 209
FG++L++IPL++ VTKL A C +C + A F+ R ++E E E+IGG + Y+ VCR Y+
Sbjct: 118 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYL 176
>sp|P04184|KITH_MOUSE Thymidine kinase, cytosolic OS=Mus musculus GN=Tk1 PE=2 SV=3
Length = 233
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Query: 26 PHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAK 85
P + G+I VI+GPMF+GK+T L+RR+R +IK +KDTRY+ +S THD
Sbjct: 14 PSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRNT 72
Query: 86 ---LPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAG 142
LP L ++T ++ LG + VIGIDE QFF D+ +FC A+ +GKTV+VA
Sbjct: 73 MDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFCEMMAN-EGKTVIVAA 123
Query: 143 LDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMP 202
LDG + R++FGS+L+++PLA++V KLTA C C + A +T R E E E+IGGAD Y
Sbjct: 124 LDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYHS 183
Query: 203 VCRQHY 208
VCR Y
Sbjct: 184 VCRLCY 189
>sp|A5D7R8|KITH_BOVIN Thymidine kinase, cytosolic OS=Bos taurus GN=TK1 PE=2 SV=1
Length = 238
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 7/185 (3%)
Query: 24 GLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG 83
G P + G+I VI+GPMF+GK+T L+RR+R +IK +KDTRY+ THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SLFSTHDR 70
Query: 84 AKLPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGL 143
+ ALP + + DA ++ VIGIDE QFF D+ EFC N A+ GKTV+VA L
Sbjct: 71 NTME--ALP--ACLLRDVIQDA-QRVAVIGIDEGQFFPDIVEFCENMAN-SGKTVIVAAL 124
Query: 144 DGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPV 203
DG + R++FG++L+++PLA++V KLTA C C + A +T R E E E+IGGAD Y V
Sbjct: 125 DGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKYHSV 184
Query: 204 CRQHY 208
CR Y
Sbjct: 185 CRLCY 189
>sp|P04183|KITH_HUMAN Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2
Length = 234
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 115/185 (62%), Gaps = 7/185 (3%)
Query: 24 GLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG 83
G P + G+I VI+GPMF+GK+T L+RR+R +IK +KDTRY+ S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 84 AKLPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGL 143
+ ALP + + +A + VIGIDE QFF D+ EFC A + GKTV+VA L
Sbjct: 71 NTM--EALP--ACLLRDVAQEALG-VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVAAL 124
Query: 144 DGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPV 203
DG + R+ FG++L+++PLA++V KLTA C C + A +T R E E E+IGGAD Y V
Sbjct: 125 DGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSV 184
Query: 204 CRQHY 208
CR Y
Sbjct: 185 CRLCY 189
>sp|P09768|KITH_CRIGR Thymidine kinase, cytosolic OS=Cricetulus griseus GN=TK1 PE=3 SV=1
Length = 234
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 117/197 (59%), Gaps = 11/197 (5%)
Query: 14 NQVNSGRDRVGLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRY 73
N +N G P + G+I VI+GPMF+GK+T L+RR+R +IK +KDTRY
Sbjct: 2 NYINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRY 61
Query: 74 AIDSVVTHDGAKLPCWALPELTSFRQKLGDDAYAKLD--VIGIDEAQFFEDLYEFCCNAA 131
+ S THD + ALP L D A L VIGIDE QFF D+ EFC
Sbjct: 62 S-SSFSTHDRNTMD--ALPACL-----LRDVAQEALGAAVIGIDEGQFFPDIVEFC-EVM 112
Query: 132 DHDGKTVVVAGLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETET 191
+ GKTV+VA LDG + R++FGS+L+++PLA++V KLTA C C + A +T R E E
Sbjct: 113 ANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEV 172
Query: 192 EIIGGADVYMPVCRQHY 208
E+IGGAD Y VCR Y
Sbjct: 173 EVIGGADKYHSVCRVCY 189
>sp|O57203|KITH_VACCA Thymidine kinase OS=Vaccinia virus (strain Ankara) GN=TK PE=1 SV=1
Length = 177
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 106/181 (58%), Gaps = 7/181 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPMF+GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEATKLCDVLESITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++L++IPL++ V KLTA C C K A F+ R EETE EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCY 174
Query: 209 V 209
V
Sbjct: 175 V 175
>sp|P68563|KITH_VACCW Thymidine kinase OS=Vaccinia virus (strain Western Reserve) GN=TK
PE=1 SV=1
Length = 177
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPMF+GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEATKLCDVLESITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++L++IPL++ V KLTA C C K A F+ R EETE EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCY 174
Query: 209 VN 210
++
Sbjct: 175 ID 176
>sp|P68564|KITH_VACCC Thymidine kinase OS=Vaccinia virus (strain Copenhagen) GN=TK PE=3
SV=1
Length = 177
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPMF+GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEATKLCDVLESITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++L++IPL++ V KLTA C C K A F+ R EETE EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCY 174
Query: 209 VN 210
++
Sbjct: 175 ID 176
>sp|Q9JFB7|KITH_VACCT Thymidine kinase OS=Vaccinia virus (strain Tian Tan) GN=TK PE=3
SV=1
Length = 177
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +++GPMF+GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLMIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEATKLCDVLESITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++L++IPL++ V KLTA C C K A F+ R EETE EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCY 174
Query: 209 VN 210
++
Sbjct: 175 ID 176
>sp|Q90033|KITH_YMTV5 Thymidine kinase OS=Yaba monkey tumor virus (strain VR587) GN=TK
PE=3 SV=1
Length = 181
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 114/179 (63%), Gaps = 7/179 (3%)
Query: 30 SGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCW 89
SG IH+I+GPMF+GK+T L+R ++ +IK SKD RY +VTHD +P
Sbjct: 5 SGYIHIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDSVP-- 61
Query: 90 ALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
A+P + S + +D A DVIGIDE QFF D+ EFC A+ +GK ++VA LDG +LR
Sbjct: 62 AIP-VNSLNEINCNDINA--DVIGIDEGQFFPDIVEFCDYMAN-NGKILIVAALDGTFLR 117
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
+ FG++L++IP A+ V KLTA C +C A F+ R ++E E EIIGG + Y VCR Y
Sbjct: 118 QPFGNILNLIPRAEYVLKLTAVCMICFGSASFSKRISDEQEIEIIGGKEKYQSVCRVCY 176
>sp|Q90029|KITH_RACVI Thymidine kinase OS=Raccoon poxvirus GN=TK PE=3 SV=1
Length = 177
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPMF+GK+T L+RR+R IK + DTRY + THD
Sbjct: 2 NGGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYTNDTRYG-TGLWTHDKHNFSA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + DA VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 METTKLLNII-----DAVTDFSVIGIDEGQFFPDIVEFCEYMAN-NGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++ ++IPL++ V KLTA C C K A F+ R ETE EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFTTISNLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGEDMYQSVCRKCY 174
Query: 209 VN 210
+N
Sbjct: 175 IN 176
>sp|P04363|KITH_MONPV Thymidine kinase OS=Monkeypox virus GN=TK PE=3 SV=2
Length = 177
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPM +GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLIIGPMLSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+ +L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEVTKLCDVLEAITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
RR F ++L++IPL++ V KLTA C C K A F+ R ETE EIIGG D+Y VCR+ Y
Sbjct: 115 RRPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCY 174
Query: 209 VN 210
++
Sbjct: 175 ID 176
>sp|P04364|KITH_VAR67 Thymidine kinase OS=Variola virus (isolate Human/India/Ind3/1967)
GN=TK PE=3 SV=2
Length = 177
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I +I+GPMF+GK+T L+RR+R IK S D RY + THD
Sbjct: 2 NGGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEA 60
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYL 148
+L + + D VIGIDE QFF D+ EFC A+ +GK V+VA LDG +
Sbjct: 61 LEATKLCDVLEAITD-----FSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQ 114
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R+ F ++LD+IPL++ V KLTA C C K A F+ R ET+ EIIGG D+Y VCR+ Y
Sbjct: 115 RKPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETKIEIIGGIDMYQSVCRKCY 174
Query: 209 VN 210
++
Sbjct: 175 ID 176
>sp|Q27564|KITH_DICDI Thymidine kinase 1 OS=Dictyostelium discoideum GN=thyB PE=1 SV=1
Length = 227
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 113/190 (59%), Gaps = 16/190 (8%)
Query: 30 SGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYA--IDS--VVTHDGAK 85
+G+I VI GPMF+GKTT L+RRI+ + + +IK SKDTRY ID +VTHD
Sbjct: 7 AGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDKQN 66
Query: 86 ---LPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAG 142
PC L ++ Q DVIGIDE QFF D+ +F + A+ GKTV++A
Sbjct: 67 YQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTVIIAA 117
Query: 143 LDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMP 202
LDG + R+ F SV+D++ A+ +TKLTA C +C A F+ R E + E+IGG D Y+
Sbjct: 118 LDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGIDKYIS 177
Query: 203 VCRQHYVNGQ 212
VCR Y + Q
Sbjct: 178 VCRGCYNSDQ 187
>sp|Q9Q8N6|KITH_MYXVL Thymidine kinase OS=Myxoma virus (strain Lausanne) GN=TK PE=3 SV=1
Length = 178
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 13/181 (7%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG---AKLP 87
G+IH+I+GPMFAGK+T L+R ++ ++K KD RY + V THD + +P
Sbjct: 6 GQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVKYEKDARYG-NGVRTHDNTCISAVP 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+L ++ S + + +VIGIDE QFF ++ FC A+ GK ++VA LDG +
Sbjct: 65 TASLDDVESISEHV--------EVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGTF 115
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
R+ F ++ ++IPLA+ VTKL A C C K A F+ R ETE EIIGG+D Y VCR+
Sbjct: 116 QRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRKC 175
Query: 208 Y 208
Y
Sbjct: 176 Y 176
>sp|P07605|KITH_RFVKA Thymidine kinase OS=Rabbit fibroma virus (strain Kasza) GN=TK PE=3
SV=2
Length = 178
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 7/178 (3%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G IH+I+GPMFAGK+T L+R +R ++K KD RY + V THD +
Sbjct: 6 GHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYG-NGVCTHDNMSITAVC 64
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLRR 150
P L D +VIGIDE QFF ++ FC A+ GK ++VA LDG + R+
Sbjct: 65 TPSLDKI-----DSVAENAEVIGIDEGQFFPNIATFCERMAN-AGKVLIVAALDGTFQRK 118
Query: 151 SFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
F ++ ++IPLA+ VTKL A C C K F+ R ++ E E+IGG+D Y VCR+ Y
Sbjct: 119 PFSNISELIPLAENVTKLNAVCMYCYKNGSFSKRLGDKMEIEVIGGSDKYKSVCRKCY 176
>sp|P28851|KITH_MYXVU Thymidine kinase OS=Myxoma virus (strain Uriarra) GN=TK PE=3 SV=1
Length = 178
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 108/181 (59%), Gaps = 13/181 (7%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG---AKLP 87
G+IH+I+GPMFAGK+T L+R ++ ++ KD RY + V THD + +P
Sbjct: 6 GQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYG-NGVRTHDNTCISAVP 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+L ++ S + + +VIGIDE QFF ++ FC A+ GK ++VA LDG +
Sbjct: 65 TASLDDVESISEHV--------EVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGTF 115
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
R+ F ++ ++IPLA+ VTKL A C C K A F+ R ETE EIIGG+D Y VCR+
Sbjct: 116 QRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRKC 175
Query: 208 Y 208
Y
Sbjct: 176 Y 176
>sp|P16600|KITH_SHEVK Thymidine kinase OS=Sheeppox virus (strain KS-1) GN=TK PE=3 SV=1
Length = 177
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G IH+I+GPMF+GK+T L+R ++ ++K KD RY +SV THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYG-NSVYTHDNNHVSAIS 62
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLRR 150
L K+ + D+IGIDE QFF+D+ F N A+ GK +++A LD + R+
Sbjct: 63 TTLLYDVVDKIMN-----FDIIGIDEGQFFKDIVSFSENMANM-GKIIIIAALDSTFQRK 116
Query: 151 SFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
F +L +IPL++ VTKL A C C K A F+ R T+E E E+IGG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGGKEKYKSVCRKCY 174
>sp|P10052|KITH_FOWPN Thymidine kinase OS=Fowlpox virus (strain NVSL) GN=TK PE=3 SV=1
Length = 183
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 108/183 (59%), Gaps = 7/183 (3%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYA---IDSVVTHDGAK 85
+SG IHVI GPMF+GKT+ L+RRI+ + +IK D RY I+ V THD
Sbjct: 2 SSGSIHVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLF 61
Query: 86 LPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDG 145
+ A L+ L +D + VIGIDEAQFF D+ EF + A+ GKTV+VA L+G
Sbjct: 62 MEATASSNLSVLVPTLLNDG---VQVIGIDEAQFFLDIVEFSESMANL-GKTVIVAALNG 117
Query: 146 DYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCR 205
D+ R FG+V ++ LA+TV+ LTA C C A F+ R TE E IGG D Y+ VCR
Sbjct: 118 DFKRELFGNVYKLLSLAETVSSLTAICVKCYCDASFSKRVTENKEVMDIGGKDKYIAVCR 177
Query: 206 QHY 208
+ +
Sbjct: 178 KCF 180
>sp|Q05880|KITH_CFEPV Thymidine kinase OS=Choristoneura fumiferana entomopoxvirus GN=TK
PE=3 SV=1
Length = 185
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Query: 33 IHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSV-VTHDGAKLPCWAL 91
I +I GPM++GKTT L+RRI +N +I S D R+ D++ + HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDF 62
Query: 92 PELTSFRQKLGDDAYAKLDVIGIDEAQFFE--DLYEFCCNAADHDGKTVVVAGLDGDYLR 149
+ K+ + K ++IGIDE QFF+ DL FC A+ +GK ++VAGL+ D+ +
Sbjct: 63 IKTNILINKIK--IFDKYEIIGIDECQFFDSNDLIIFCDTLAN-NGKKIIVAGLNSDFNK 119
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
F S++ +IP+++ +TKL + C C A FT++K + IGG+D+Y+PVCR Y
Sbjct: 120 NPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICY 178
>sp|P28852|KITH_AMEPV Thymidine kinase OS=Amsacta moorei entomopoxvirus GN=TK PE=3 SV=1
Length = 182
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 33 IHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWALP 92
I +I+GPMF+GKTT L+R+I + + +I + D R+ +++ HDG L L
Sbjct: 3 IELIIGPMFSGKTTELMRKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLY 62
Query: 93 ELTS--FRQKLGDDAYAKLDVIGIDEAQFFE--DLYEFCCNAADHDGKTVVVAGLDGDYL 148
T+ + D Y D+IGIDE QFFE DL +FC A+ + K V+VAGL+ D+
Sbjct: 63 IKTNNLINEINIVDNY---DIIGIDECQFFEENDLEQFCDKMAN-NKKKVIVAGLNCDFN 118
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
R F S+ +IP + + KL A C+ C K A FT++K + + IGG D+Y+PVCR Y
Sbjct: 119 RNIFNSISKLIPKVEKIKKLQAICQFCYKDASFTIKKHNKNQIIEIGGQDLYVPVCRLCY 178
Query: 209 VNG 211
N
Sbjct: 179 NNS 181
>sp|Q05879|KITH_CBEPV Thymidine kinase OS=Choristoneura biennis entomopoxvirus GN=TK PE=3
SV=1
Length = 186
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 33 IHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDS--VVTHDGAKLPCWA 90
I +I GPM++GKTT L+RRI +N +I S D R D ++ HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDD 62
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFFE--DLYEFCCNAADHDGKTVVVAGLDGDYL 148
+ K+ + K ++IGIDE QFF+ DL FC A++ GK ++VAGL+ D+
Sbjct: 63 FIKTNILINKIK--IFDKYEIIGIDECQFFDSNDLMIFCDTLANN-GKKIIVAGLNSDFN 119
Query: 149 RRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
+ F S++ +IP+++ +TKL + C C A FT++K + IGG+D+Y+PVCR Y
Sbjct: 120 KNPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICY 179
>sp|A6L1E7|KITH_BACV8 Thymidine kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM
1447 / NCTC 11154) GN=tdk PE=3 SV=1
Length = 199
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
R G I VI G MF+GKT L+RR++ + + + K + DTRY+ + VV+HD +
Sbjct: 13 RRRGRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIA 72
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ S D DV+GIDEAQFF++ CN +G V+VAGLD D+
Sbjct: 73 STPIDSSASILLFSSDK-----DVVGIDEAQFFDEGLVDVCNKLADNGIRVIVAGLDMDF 127
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
R FG + ++ +AD VTK+ A C CG A+ T R T+ + ++G Y P+CR
Sbjct: 128 RRVPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSEKRVLLGEKADYEPLCRTC 187
Query: 208 YVNG 211
Y+
Sbjct: 188 YMEA 191
>sp|Q65DU6|KITH_BACLD Thymidine kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=tdk PE=3 SV=1
Length = 194
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
+ SG + +I G MF+GK+ L+RRI+ + + + + K + D RY+ +SVV+H+G +
Sbjct: 5 KQSGWLELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIV 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
C A+ Q + + DVIG+DE QFF++ + G V+ AGLD D+
Sbjct: 65 CHAIASPEEIFQYISKET----DVIGVDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG V D++ LA+TVTKL A C +CG A T R + + ++G ++ Y
Sbjct: 121 RGEPFGVVPDLMALAETVTKLQAVCSVCGSPASRTQRLINGKPASYDDPVILVGASEAYE 180
Query: 202 PVCRQHY 208
CR H+
Sbjct: 181 ARCRHHH 187
>sp|Q6F0I2|KITH_MESFL Thymidine kinase OS=Mesoplasma florum (strain ATCC 33453 / NBRC
100688 / NCTC 11704 / L1) GN=tdk PE=3 SV=1
Length = 203
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 21 DRVGLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVT 80
+R + + G + +I G MFAGKT ++R+R + RN+ K DTRYA++ V +
Sbjct: 4 NRDTIEQKQLGWVELITGCMFAGKTEEFIKRLRRHAFAKRNVIAFKPVIDTRYAVNEVAS 63
Query: 81 HDGAKLPCWALPELTSFRQKLGDDAY-AKLDVIGIDEAQFFED-LYEFCCNAADHDGKTV 138
H G LP + ++KL K+DV+GIDE QFF++ + ++ AD G V
Sbjct: 64 HAGTLLPSIPVNSTAELKEKLEAKILEKKVDVVGIDEIQFFDEAIVDYIEELADR-GIIV 122
Query: 139 VVAGLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETE------ 192
+V GLD D+ + F +V I+PLA+ V KLTA C+ CG A T R + +
Sbjct: 123 IVTGLDKDFRSQPFKNVDRILPLAEMVDKLTAICQKCGNFANRTQRIIDGKPADWNSPLI 182
Query: 193 IIGGADVYMPVCRQHY 208
++ G D Y CR Y
Sbjct: 183 LVDGNDSYEARCRNCY 198
>sp|Q7MVV7|KITH_PORGI Thymidine kinase OS=Porphyromonas gingivalis (strain ATCC BAA-308 /
W83) GN=tdk PE=3 SV=1
Length = 204
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI G MF+GKT LLRR+R + + + K + D RY VV+HD K +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHD--KNAIAS 73
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
P S L +++DV+GIDEAQFF E L E AD G VV+AGLD D+ R
Sbjct: 74 TPVDNSANILL---LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
+ FG + + +AD+VTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>sp|Q9ZIG2|KITH_RHOSI Thymidine kinase OS=Rhodothermus sp. (strain ITI 518) GN=tdk PE=3
SV=1
Length = 213
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI G MF+GKT L+RR+R + + + K D RY+ VV+HD L
Sbjct: 15 GWIEVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTP 74
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDYLRR 150
+ L D A DV+GIDEAQFF+ C +DGK V+VAGLD +Y+ R
Sbjct: 75 VDSAEQI-LLLADSA----DVVGIDEAQFFDMTLVDVCQQLANDGKRVIVAGLDQEYMGR 129
Query: 151 SFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
+ + +A+ VTKL A C +CG A + R T+E ++G AD Y P CR+ +
Sbjct: 130 PLEPMPQFMAVAEYVTKLHAICAVCGAPANHSQRLTDEEGRVVLGAADRYEPRCRRCF 187
>sp|B2RJJ6|KITH_PORG3 Thymidine kinase OS=Porphyromonas gingivalis (strain ATCC 33277 /
DSM 20709 / JCM 12257) GN=tdk PE=3 SV=1
Length = 204
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI G MF+GKT LLRR+R + + + K + D RY VV+HD K +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHD--KNAIAS 73
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
P S L +++DV+GIDEAQFF E L E AD G VV+AGLD D+ R
Sbjct: 74 APVDNSANILL---LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQHY 208
+ FG + + +AD+VTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>sp|Q8A5G4|KITH_BACTN Thymidine kinase OS=Bacteroides thetaiotaomicron (strain ATCC 29148
/ DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=tdk PE=3
SV=1
Length = 199
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 11/188 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDG---A 84
R G I VI G MF+GKT L+RR++ + + + K + DTRY+ + VV+HD A
Sbjct: 13 RRRGRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIA 72
Query: 85 KLPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLD 144
P + + F +++DV+GIDEAQFF+D C ++G V++AGLD
Sbjct: 73 STPIDSSASILLF--------TSEIDVVGIDEAQFFDDGLIDVCRQLANNGIRVIIAGLD 124
Query: 145 GDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVC 204
D+ FG + + +AD V+K+ A C CG A F+ R + + ++G Y P+C
Sbjct: 125 MDFKGNPFGPMPQLCAIADEVSKVHAICVKCGDLASFSHRTVKNDKQVLLGETAEYEPLC 184
Query: 205 RQHYVNGQ 212
R+ Y+ +
Sbjct: 185 RECYLRAR 192
>sp|C5D9N8|KITH_GEOSW Thymidine kinase OS=Geobacillus sp. (strain WCH70) GN=tdk PE=3 SV=1
Length = 205
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 12/188 (6%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
+ SG + VI G MF+GK+ L+RR+R + + + + K + D RY+ ++VV+H+G L
Sbjct: 5 KQSGWLEVICGSMFSGKSEELIRRVRRATFAKQEVKVFKPTIDNRYSDEAVVSHNGNSL- 63
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGD 146
A+P S +++ + K DVI IDE QFF +D+ + AD G V+VAGLD D
Sbjct: 64 -IAIP--VSSPKEIFEHISEKTDVIAIDEVQFFSDDIIDVVQTLADR-GYRVIVAGLDQD 119
Query: 147 YLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETE------IIGGADVY 200
+ FG V ++ +A++VTKL A C +CG A T R ++G ++ Y
Sbjct: 120 FRGEPFGPVPTLMAIAESVTKLQAVCTVCGSPASRTQRLINGVPASYYDPVILVGASESY 179
Query: 201 MPVCRQHY 208
P CR H+
Sbjct: 180 EPRCRHHH 187
>sp|Q64YL9|KITH_BACFR Thymidine kinase OS=Bacteroides fragilis (strain YCH46) GN=tdk PE=3
SV=1
Length = 199
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
R G I VI G MF+GKT L+RR++ + + + K + DTRY+ VV+HD +
Sbjct: 13 RRRGRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSIS 72
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ S +++DV+GIDEAQFF+ CN ++G V++AGLD D+
Sbjct: 73 STPIDSSASILL-----FTSEIDVVGIDEAQFFDSGLIDVCNQLANNGVRVIIAGLDMDF 127
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
FG + + +AD V+K+ A C CG+ A F+ R + + ++G Y P+CR+
Sbjct: 128 KGVPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCREC 187
Query: 208 Y 208
Y
Sbjct: 188 Y 188
>sp|Q5LHP5|KITH_BACFN Thymidine kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC
9343) GN=tdk PE=3 SV=1
Length = 199
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
R G I VI G MF+GKT L+RR++ + + + K + DTRY+ VV+HD +
Sbjct: 13 RRRGRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSIS 72
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ S +++DV+GIDEAQFF+ CN ++G V++AGLD D+
Sbjct: 73 STPIDSSASILL-----FTSEIDVVGIDEAQFFDSGLIDVCNQLANNGVRVIIAGLDMDF 127
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
FG + + +AD V+K+ A C CG+ A F+ R + + ++G Y P+CR+
Sbjct: 128 KGIPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCREC 187
Query: 208 Y 208
Y
Sbjct: 188 Y 188
>sp|A4ITL0|KITH_GEOTN Thymidine kinase OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=tdk PE=3 SV=1
Length = 207
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 12/187 (6%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
SG + VI G MF+GK+ L+RRIR + + + K + D RY+ D+VV+H+G +
Sbjct: 6 QSGWLEVICGSMFSGKSEELIRRIRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSV-- 63
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDY 147
A+P T +L A DV+ IDE QFF +D+ + AD G V+ AGLD D+
Sbjct: 64 IAIPVATP--AELFRYISATTDVVAIDEVQFFSDDIIDVVQTLADR-GYRVIAAGLDQDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG V ++ LA++VTKL A C +CG A T R + + ++G ++ Y
Sbjct: 121 RGEPFGPVPALMALAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPIILVGASEAYE 180
Query: 202 PVCRQHY 208
P CR H+
Sbjct: 181 PRCRHHH 187
>sp|Q4A977|KITH_MYCHJ Thymidine kinase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934
/ NCTC 10110) GN=tdk PE=3 SV=1
Length = 184
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI GPMF+GK+ L++RI+ + +IK S D R++ +V+ G K+P +
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
R D Y I IDE QFF E++ F AD G V+V+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNY---QAIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCR 205
+ FGS+ +++ +A+ VTKL A C LC + A T RK +IG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|Q4A7B8|KITH_MYCH7 Thymidine kinase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tdk
PE=3 SV=1
Length = 184
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI GPMF+GK+ L++RI+ + +IK S D R++ +V+ G K+P +
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
R D Y I IDE QFF E++ F AD G V+V+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNY---QAIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCR 205
+ FGS+ +++ +A+ VTKL A C LC + A T RK +IG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|Q5ZZT0|KITH_MYCH2 Thymidine kinase OS=Mycoplasma hyopneumoniae (strain 232) GN=tdk
PE=3 SV=1
Length = 184
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I VI GPMF+GK+ L++RI+ + +IK S D R++ +V+ G K+P +
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 91 LPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDYLR 149
R D Y I IDE QFF E++ F AD G V+V+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNY---QAIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 150 RSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCR 205
+ FGS+ +++ +A+ VTKL A C LC + A T RK +IG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|B3PM40|KITH_MYCA5 Thymidine kinase OS=Mycoplasma arthritidis (strain 158L3-1) GN=tdk
PE=3 SV=1
Length = 194
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
N G I VI GPMF+GK+ LL+RIR+ +IK DTR++ + +V+ G K
Sbjct: 6 NEGMIEVITGPMFSGKSEELLKRIRTLEYAKLKPLVIKPEFDTRFSENEIVSRAGVKHKT 65
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGDY 147
L + L +D Y + IDEA +F E+L + + A+ G V+VAGLD +Y
Sbjct: 66 HILKNINDVYFLLQEDKY---KAVVIDEAHWFNEELVKVADDLAN-KGYLVIVAGLDQNY 121
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVCRQH 207
LR FG + +++ +A+ VTKL A C C A + RK +E ++G Y CR+
Sbjct: 122 LREPFGPIPNLLAIAERVTKLQAICVKCQHAASTSFRKVAASEINLLGDFQEYEARCRKC 181
Query: 208 YVNGQ 212
+ GQ
Sbjct: 182 HNAGQ 186
>sp|B7GMH4|KITH_ANOFW Thymidine kinase OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=tdk PE=3 SV=1
Length = 206
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
+ SG + VI G MF+GK+ L+RR+R + + + K + D RY+ ++VV+H+G +
Sbjct: 5 KQSGWLEVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVI 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGD 146
+ + R+ + DV+ IDE QFF E + + AD +G V+VAGLD D
Sbjct: 65 AIPVSCASDIRKHIT----THTDVVAIDEVQFFDEHVVDVVQQLAD-EGYRVIVAGLDQD 119
Query: 147 YLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETE------IIGGADVY 200
+ FG V ++ +A++VTKL A C +CG A T R +IG ++ Y
Sbjct: 120 FRGEPFGPVPTLMSIAESVTKLQAVCTVCGSPASRTQRLINGRPASYYDPVILIGASESY 179
Query: 201 MPVCRQHY 208
P CR H+
Sbjct: 180 EPRCRHHH 187
>sp|Q8ZV53|KITH_PYRAE Thymidine kinase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2
/ DSM 7523 / JCM 9630 / NBRC 100827) GN=tdk PE=3 SV=1
Length = 185
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 35 VIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWALP-- 92
VI+GPMFAGKTT L+RR+ GR + K S D RY V H+G K + +P
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGRRAIVFKPSLDVRYDASKVAAHNGLKFDAFVIPPD 63
Query: 93 -ELTSFRQKLGDDAYAKLDVIGIDEAQFFE-DLYEFCCNAADHDGKTVVVAGLDGDYLRR 150
+ +K+G A+ DV+ +DE QFF DL + A +G+ V+ AGL+ D+
Sbjct: 64 KDGVEIIRKMG----AEYDVVAVDEIQFFPVDLADALNQLA--NGRIVIAAGLNLDFRGE 117
Query: 151 SFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYMPVC 204
F + + AD V L+A C+LCGK A T R + +IGG + Y C
Sbjct: 118 PFETTARAMAFADRVISLSAVCKLCGKPATRTQRLINGVPAPRHSPRILIGGNESYEARC 177
Query: 205 RQHYV 209
R+HYV
Sbjct: 178 RRHYV 182
>sp|B5ZCA9|KITH_UREU1 Thymidine kinase OS=Ureaplasma urealyticum serovar 10 (strain ATCC
33699 / Western) GN=tdk PE=3 SV=1
Length = 223
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 31 GEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPCWA 90
G I +I GPMFAGKT L+RR+ + K DTR + ++ + G LP
Sbjct: 12 GWIELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTGTSLPSIE 70
Query: 91 L---PELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ PE+ S+ + D+ ++ VIGIDE QFF+D N +G V+++GLD ++
Sbjct: 71 VENAPEILSY--IMSDNFDNEIKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNF 128
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTE------ETETEIIGGADVYM 201
FG + + AD +TKLTA C CG A +LRK + + E IG + Y
Sbjct: 129 KGEPFGPIAKLFAYADKITKLTAICNECGAEATHSLRKIDGKYANYDDEIVKIGCQEFYS 188
Query: 202 PVCRQHY 208
VCR H+
Sbjct: 189 AVCRHHH 195
>sp|Q9RSY5|KITH_DEIRA Thymidine kinase OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=tdk PE=3 SV=1
Length = 212
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
+ G + V++GPMF+GK+ L+RR+ + +A+ K + D RY V +H G L
Sbjct: 7 SGGHLEVVVGPMFSGKSEELIRRLTRSLIARQRVAVFKPAIDNRYHASEVASHAGRTLEA 66
Query: 89 WALPELTSFRQKLGDD------AYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVA 141
A+P+ + R +L A +DVIGIDEAQFF +L AD G VV+A
Sbjct: 67 VAVPDAQAIRAQLSGQGELLSAAPEGVDVIGIDEAQFFGPELVPLVLELADA-GVRVVLA 125
Query: 142 GLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR 184
GLD D+ FGS+ +++ A++V KLTA C +CG A T R
Sbjct: 126 GLDLDFRAEPFGSMPELLARAESVDKLTAICTVCGAPATRTQR 168
>sp|Q2RZH4|KITH_SALRD Thymidine kinase OS=Salinibacter ruber (strain DSM 13855 / M31)
GN=tdk PE=3 SV=1
Length = 227
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKL- 86
R +G + VI G MF+GKT L+RR+R ++ + K + D RY+ D VV+H+ +
Sbjct: 5 RTTGWMEVICGSMFSGKTEELIRRLRRARIARQHTRVFKPALDERYSEDEVVSHNENSVT 64
Query: 87 --PCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLD 144
P A P++ Q+ DV+GIDEAQFF+D C A DG V+V GLD
Sbjct: 65 TTPVEAPPQIQELVQEA--------DVVGIDEAQFFDDDLVPTCQALAEDGHRVIVVGLD 116
Query: 145 GDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGGADVYMPVC 204
DY F + ++ +A+ VTKL A C +CG A + R + ++G + Y P C
Sbjct: 117 TDYRAEPFDPMPQLMAVAEHVTKLHAVCVVCGAPANHSQRIVPGEDRVLVGATEAYEPRC 176
Query: 205 RQHYVNGQVVIGAAR 219
R + V + R
Sbjct: 177 RACFEPEPVTVTRPR 191
>sp|Q03221|KITH_BACSU Thymidine kinase OS=Bacillus subtilis (strain 168) GN=tdk PE=3 SV=2
Length = 195
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
+ SG + +I G MF+GK+ L+RR++ + + + + K D RY+ +VV+H+G +
Sbjct: 5 KQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMT 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFF-EDLYEFCCNAADHDGKTVVVAGLDGD 146
+A+ S + D DV+ +DE QFF +++ E + AD G V+ AGLD D
Sbjct: 65 SYAI----SSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLAD-KGYRVIAAGLDMD 119
Query: 147 YLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVY 200
+ FG V +I+ +A++VTKL A C +CG A T R + + ++G A+ Y
Sbjct: 120 FRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESY 179
Query: 201 MPVCRQHY 208
CR H+
Sbjct: 180 EARCRHHH 187
>sp|Q8RDA1|KITH_THETN Thymidine kinase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=tdk PE=3 SV=1
Length = 193
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 12/185 (6%)
Query: 29 NSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLPC 88
+ G I VI+GPMF+GK+ L+RRIR + + + K + D RY+ID VV+H+G+ +
Sbjct: 7 DHGFIEVIVGPMFSGKSEELIRRIRRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGSSINA 66
Query: 89 WALPELTSFRQKLGDDAYAKLDVIGIDEAQFFE-DLYEFCCNAADHDGKTVVVAGLDGDY 147
++ + + L +D V+ IDE QFF+ L + AD GK V+ AGLD D+
Sbjct: 67 ISVTKASEILDLLEEDT----QVVAIDEIQFFDHSLVDVVREIADM-GKRVICAGLDMDF 121
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR----KTEETETEII--GGADVYM 201
FG DI+ +A++V KLTA C CG A T R K + + II G + Y
Sbjct: 122 RGEPFGVTPDIMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYE 181
Query: 202 PVCRQ 206
CR+
Sbjct: 182 ARCRK 186
>sp|A7G9N9|KITH_CLOBL Thymidine kinase OS=Clostridium botulinum (strain Langeland / NCTC
10281 / Type F) GN=tdk PE=3 SV=1
Length = 191
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
++ G I V+ GPM++GKT L+RRIR + + + K D RY+ VV+H G K+
Sbjct: 5 KDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQ 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ +KL DD DVIGIDEAQFF+D + ++ + V+ AGLD D+
Sbjct: 65 SVPVKSSKEILEKLLDDT----DVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG + ++ +A+ V K+ A C +C A T R + +IG + Y
Sbjct: 121 KGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYE 180
Query: 202 PVCRQ 206
CR+
Sbjct: 181 ARCRK 185
>sp|B1IE18|KITH_CLOBK Thymidine kinase OS=Clostridium botulinum (strain Okra / Type B1)
GN=tdk PE=3 SV=1
Length = 191
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
++ G I V+ GPM++GKT L+RRIR + + + K D RY+ VV+H G K+
Sbjct: 5 KDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQ 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ +KL DD DVIGIDEAQFF+D + ++ + V+ AGLD D+
Sbjct: 65 SVPVKSSKEILEKLLDDT----DVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG + ++ +A+ V K+ A C +C A T R + +IG + Y
Sbjct: 121 KGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYE 180
Query: 202 PVCRQ 206
CR+
Sbjct: 181 ARCRK 185
>sp|A5HY32|KITH_CLOBH Thymidine kinase OS=Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A) GN=tdk PE=3 SV=1
Length = 191
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
++ G I V+ GPM++GKT L+RRIR + + + K D RY+ VV+H G K+
Sbjct: 5 KDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQ 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ +KL DD DVIGIDEAQFF+D + ++ + V+ AGLD D+
Sbjct: 65 SVPVKSSKEILEKLLDDT----DVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG + ++ +A+ V K+ A C +C A T R + +IG + Y
Sbjct: 121 KGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYE 180
Query: 202 PVCRQ 206
CR+
Sbjct: 181 ARCRK 185
>sp|A7FQF9|KITH_CLOB1 Thymidine kinase OS=Clostridium botulinum (strain ATCC 19397 / Type
A) GN=tdk PE=3 SV=1
Length = 191
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 28 RNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAIDSVVTHDGAKLP 87
++ G I V+ GPM++GKT L+RRIR + + + K D RY+ VV+H G K+
Sbjct: 5 KDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQ 64
Query: 88 CWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGKTVVVAGLDGDY 147
+ +KL DD DVIGIDEAQFF+D + ++ + V+ AGLD D+
Sbjct: 65 SVPVKSSKEILEKLLDDT----DVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDF 120
Query: 148 LRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLR------KTEETETEIIGGADVYM 201
FG + ++ +A+ V K+ A C +C A T R + +IG + Y
Sbjct: 121 KGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYE 180
Query: 202 PVCRQ 206
CR+
Sbjct: 181 ARCRK 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,811,502
Number of Sequences: 539616
Number of extensions: 3532670
Number of successful extensions: 10805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 10350
Number of HSP's gapped (non-prelim): 227
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)