Query 026305
Match_columns 240
No_of_seqs 175 out of 1442
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:22:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 5.1E-62 1.8E-66 436.2 20.2 235 6-240 82-319 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 4.8E-57 1.6E-61 409.5 16.9 210 5-217 134-348 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 6.2E-55 2.1E-59 389.2 21.1 202 6-213 91-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 4.9E-53 1.7E-57 379.8 16.2 200 6-214 96-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 4.1E-53 1.4E-57 377.4 15.0 198 5-216 92-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 3.7E-48 1.2E-52 340.8 16.9 182 7-213 83-276 (280)
7 3dkq_A PKHD-type hydroxylase S 95.1 0.044 1.5E-06 46.4 6.8 79 78-174 100-194 (243)
8 2rg4_A Uncharacterized protein 92.9 1.2 4.2E-05 36.6 11.2 43 123-177 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 87.3 1 3.5E-05 37.8 6.0 80 79-174 119-212 (247)
10 3itq_A Prolyl 4-hydroxylase, a 87.3 1.4 4.8E-05 36.4 6.7 107 46-174 91-211 (216)
11 2jig_A Prolyl-4 hydroxylase; h 86.8 0.79 2.7E-05 37.6 5.0 108 47-175 79-217 (224)
12 3s57_A Alpha-ketoglutarate-dep 80.9 2.4 8.1E-05 34.5 5.3 79 79-172 102-200 (204)
13 2iuw_A Alkylated repair protei 80.6 3.4 0.00012 34.4 6.4 83 79-174 128-229 (238)
14 3tht_A Alkylated DNA repair pr 76.0 2.6 8.9E-05 37.3 4.4 92 79-177 200-315 (345)
15 3i3q_A Alpha-ketoglutarate-dep 74.3 5.2 0.00018 32.7 5.6 78 79-173 107-201 (211)
16 2da7_A Zinc finger homeobox pr 53.4 12 0.00042 25.3 3.2 40 30-69 14-53 (71)
17 2x4k_A 4-oxalocrotonate tautom 39.1 27 0.00094 21.4 3.2 22 43-64 19-40 (63)
18 1e5r_A Proline oxidase; oxidor 36.4 42 0.0014 28.8 4.7 21 153-173 155-175 (290)
19 3abf_A 4-oxalocrotonate tautom 35.2 29 0.00098 21.6 2.8 22 43-64 17-38 (64)
20 1otf_A 4-oxalocrotonate tautom 30.5 51 0.0017 20.2 3.4 23 42-64 15-37 (62)
21 2opa_A Probable tautomerase YW 30.5 46 0.0016 20.4 3.2 23 42-64 15-37 (61)
22 3ry0_A Putative tautomerase; o 26.4 66 0.0023 20.2 3.4 23 42-64 15-37 (65)
23 2ww6_A Fibritin, T4 fibritin; 25.7 56 0.0019 17.6 2.3 14 116-129 11-24 (27)
24 3m21_A Probable tautomerase HP 23.8 79 0.0027 20.0 3.4 23 42-64 18-40 (67)
25 3m20_A 4-oxalocrotonate tautom 22.5 61 0.0021 20.3 2.6 22 43-64 15-36 (62)
26 1gyx_A YDCE, B1461, hypothetic 22.3 80 0.0027 20.6 3.3 24 42-65 16-39 (76)
27 3mb2_A 4-oxalocrotonate tautom 21.7 89 0.003 20.1 3.4 23 42-64 16-38 (72)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5.1e-62 Score=436.18 Aligned_cols=235 Identities=76% Similarity=1.203 Sum_probs=200.5
Q ss_pred CCCCCCCeeeeeecCC--CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceeee
Q 026305 6 KALSSCATFLFQTWLK--SPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSN 83 (240)
Q Consensus 6 ~~l~w~~~~~~~~~p~--~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 83 (240)
+..+|++.|++...|. +|.||+.+++||+.+++|+++|.+++.+|+++||++||+++++|.+.+.+..++.+.+|++|
T Consensus 82 ~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 161 (319)
T 1w9y_A 82 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN 161 (319)
T ss_dssp GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred CCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEe
Confidence 4578999999887663 57899999999999999999999999999999999999999999998875322457899999
Q ss_pred eCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCcccccccccccCCC
Q 026305 84 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE 163 (240)
Q Consensus 84 Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~~~~ 163 (240)
||||++++...|+++|||+|+||||+||+.++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.++.
T Consensus 162 YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~ 241 (319)
T 1w9y_A 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 241 (319)
T ss_dssp CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS
T ss_pred cCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCC
Confidence 99999988889999999999999999965699999999999999999999999999999999999999999999999888
Q ss_pred CCcccceeeecCCCCeEEecCccccccccC-CCCCCCCccHHHHHHHHHhcccCCCchhhHhhhhhHHhhhcCCCcCC
Q 026305 164 GNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 240 (240)
Q Consensus 164 ~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~-~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++|||++||++|+.|++|+|++++++++.+ +|++|++++++||++.++.+++.++...|+.+|++++....+||||+
T Consensus 242 ~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T 1w9y_A 242 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319 (319)
T ss_dssp SCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC------------
T ss_pred CCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence 899999999999999999999999986411 37899999999999999998888887779999999999999999996
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.8e-57 Score=409.50 Aligned_cols=210 Identities=32% Similarity=0.510 Sum_probs=191.3
Q ss_pred CCCCCCCCeeeeeecC----CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccce
Q 026305 5 GKALSSCATFLFQTWL----KSPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTK 80 (240)
Q Consensus 5 ~~~l~w~~~~~~~~~p----~~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr 80 (240)
....+|++.|++...| .+|.||+.+++||+.+++|+++|.+++.+||++||++||+++++|.+.+.......+.+|
T Consensus 134 ~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr 213 (356)
T 1gp6_A 134 SGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK 213 (356)
T ss_dssp TCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE
T ss_pred CCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceee
Confidence 4578999999888765 368899999999999999999999999999999999999999999998752101346799
Q ss_pred eeeeCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCccccccccccc
Q 026305 81 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIA 160 (240)
Q Consensus 81 l~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~ 160 (240)
++|||||++++..+|+++|||+|+||||+|| .++||||+++|+|++|+|+||++|||+||+||+||||+|||+.|||+.
T Consensus 214 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~ 292 (356)
T 1gp6_A 214 INYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLV 292 (356)
T ss_dssp EEEECCCSSTTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECC
T ss_pred eeecCCCCCcccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecC
Confidence 9999999988888999999999999999998 599999999999999999999999999999999999999999999998
Q ss_pred CCCCCcccceeeecCCCCe-EEecCccccccccCCCCCCCCccHHHHHHHHHhcccCC
Q 026305 161 QTEGNRMSIASFYNPGSDA-VIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQA 217 (240)
Q Consensus 161 ~~~~~R~Si~~F~~p~~d~-~i~p~~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~ 217 (240)
++..+|||++||++|+.|+ +|+|++++++++ +|++|++++++||++.++.+++++
T Consensus 293 ~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~--~p~~y~~~t~~eyl~~~~~~~~d~ 348 (356)
T 1gp6_A 293 NKEKVRISWAVFCEPPKDKIVLKPLPEMVSVE--SPAKFPPRTFAQHIEHKLFGKEQE 348 (356)
T ss_dssp CSSCCEEEEEEEEECCTTTCEECCCGGGCCSS--SCCSSCCEEHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeecCCCCCcEEeCChhhcCCC--CCccCCCccHHHHHHHHHHhccCc
Confidence 8888999999999999999 999999999865 689999999999999988877643
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=6.2e-55 Score=389.18 Aligned_cols=202 Identities=25% Similarity=0.344 Sum_probs=179.2
Q ss_pred CCCCCCCeeeeee-cC---------CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCC
Q 026305 6 KALSSCATFLFQT-WL---------KSPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGP 75 (240)
Q Consensus 6 ~~l~w~~~~~~~~-~p---------~~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 75 (240)
...+|++.|.+.. .+ .+|.||+.+++||+++++|+++|.+++.+|+++||++||+++++|.+.+.. +
T Consensus 91 ~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~---~ 167 (312)
T 3oox_A 91 DHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQD---G 167 (312)
T ss_dssp CSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTT---C
T ss_pred CCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcC---C
Confidence 4578888876642 11 258999889999999999999999999999999999999999999998864 3
Q ss_pred CccceeeeeCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEE-eCCeEEEeccCCCcEEEecchhhHHHhCCccccc
Q 026305 76 TFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLL-KDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSV 154 (240)
Q Consensus 76 ~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~ 154 (240)
.+.+|++|||||+.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|+||++|||+||+||+||||+|||+
T Consensus 168 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~ 246 (312)
T 3oox_A 168 NSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPST 246 (312)
T ss_dssp CCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCC
T ss_pred cceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCC
Confidence 467999999999876555899999999999999997 59999997 5899999999999999999999999999999999
Q ss_pred ccccccCC----CCCcccceeeecCCCCeEEecCccccccccCCCCCCC-CccHHHHHHHHHhc
Q 026305 155 LHRVIAQT----EGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYP-KFVFEDYMKLYAGL 213 (240)
Q Consensus 155 ~HRVv~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~p~~y~-~~~~~ey~~~~~~~ 213 (240)
.|||++++ ..+|||++||++|+.|++|+|+++|++++ +|++|+ +++++||++.+++.
T Consensus 247 ~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~--~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 247 VHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAE--NPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp CEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSS--SCCSCSSCEEHHHHHHHHHHH
T ss_pred CceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCC--CcccCCCCeeHHHHHHHHHHH
Confidence 99998764 35799999999999999999999999875 689999 99999999987763
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.9e-53 Score=379.80 Aligned_cols=200 Identities=21% Similarity=0.230 Sum_probs=180.8
Q ss_pred CCCCCCCeeeeeecC--------------CCCCCCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHh
Q 026305 6 KALSSCATFLFQTWL--------------KSPILKMI--TGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVF 69 (240)
Q Consensus 6 ~~l~w~~~~~~~~~p--------------~~~~~p~~--~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~ 69 (240)
+..+|++.|++.... .+|.||+. +++||+.+++|+++|.+++.+|+++||++||+++++|.+.+
T Consensus 96 ~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 175 (331)
T 1odm_A 96 GKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHF 175 (331)
T ss_dssp TTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGC
T ss_pred CCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Confidence 577999999887421 36899987 89999999999999999999999999999999999999887
Q ss_pred cCCCCCCccce--eeeeC------C---CCCCCc-CCCcccccCCCCceEEeecCCCCeeEEE-eCCeEEEeccCCCcEE
Q 026305 70 YGSKGPTFGTK--VSNYP------P---CPKPDL-IKGLRAHTDAGGIILLFQDDEVSGLQLL-KDDQWVDVPPMKHSIV 136 (240)
Q Consensus 70 ~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~g~W~~V~p~~g~lv 136 (240)
.. +.+.+| ++||| | |++++. .+|+++|||+|+||||+|| .++||||+ ++| |++|+|+||++|
T Consensus 176 ~~---~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalv 250 (331)
T 1odm_A 176 KP---DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYL 250 (331)
T ss_dssp CT---TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEE
T ss_pred cC---cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEE
Confidence 54 347799 99999 7 777776 7899999999999999997 59999999 578 999999999999
Q ss_pred EecchhhHHHhCCcccccccccccCCCCCcccceeeecCCCCeEEecCccccccccCCCCCCCCccHHHHHHHHHhcc
Q 026305 137 INLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLK 214 (240)
Q Consensus 137 VniGd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~ 214 (240)
||+||+||+||||+|||+.|||+.+ ..+|||++||++|+.|++|+|++++++++ + ++|++++++||++.++++.
T Consensus 251 VNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~--~-~~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 251 INCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNG--K-SDREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp EEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTC--C-CSSCCCBHHHHHHHHHHHH
T ss_pred EEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCcccccc--c-cCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999864 67899999999999999999999999865 4 7899999999999887654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.1e-53 Score=377.37 Aligned_cols=198 Identities=16% Similarity=0.173 Sum_probs=168.8
Q ss_pred CCCCCCCCeeeeeecCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ChhhHHHHhcCCCCCCccce
Q 026305 5 GKALSSCATFLFQTWLKSPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGL----EEGYLKKVFYGSKGPTFGTK 80 (240)
Q Consensus 5 ~~~l~w~~~~~~~~~p~~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl----~~~~f~~~~~~~~~~~~~lr 80 (240)
++..+|++.|++... +|.|| +++||+.+++|+++|.+++.+|+++||++||+ ++++|.+. .+.+|
T Consensus 92 ~~~~d~~E~~~~~~~--~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-------~~~lr 160 (311)
T 1dcs_A 92 GSYSDYSMCYSMGTA--DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-------EPLLR 160 (311)
T ss_dssp ------CEEEEECSS--SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-------CCEEE
T ss_pred CCCCCcceeeeccCC--CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-------chhhh
Confidence 457899999888654 68999 89999999999999999999999999999999 88888763 35799
Q ss_pred eeeeCCCCCCC--c--CCCcccccCCCCceEEeecCCCCe---eEEEeCCeEEEeccCCCcEEEecchhhHHHhCCcccc
Q 026305 81 VSNYPPCPKPD--L--IKGLRAHTDAGGIILLFQDDEVSG---LQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKS 153 (240)
Q Consensus 81 l~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~qd~~~~G---LqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s 153 (240)
++|||||++++ . .+|+++|||+|+||||+||+.++| |||+++|+|++|+|+||++|||+||+||+||||+|||
T Consensus 161 l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS 240 (311)
T 1dcs_A 161 FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKA 240 (311)
T ss_dssp EEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCC
T ss_pred eecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccC
Confidence 99999998764 2 568999999999999999745899 9999999999999999999999999999999999999
Q ss_pred cccccccCC-----CCCcccceeeecCCCCeEEecCccccccccCCCCCC--CCccHHHHHHHHHhcccC
Q 026305 154 VLHRVIAQT-----EGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVY--PKFVFEDYMKLYAGLKFQ 216 (240)
Q Consensus 154 ~~HRVv~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~p~~y--~~~~~~ey~~~~~~~~~~ 216 (240)
+.|||+.++ ..+|||++||++|+.|++|+ ++++++++ +|++| ++++++||++.++.+.+.
T Consensus 241 ~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~--~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 241 PRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECG--FDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp CCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTT--CCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred CCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCC--CccccCCCCccHHHHHHHHHHHHhc
Confidence 999999886 66899999999999999999 99999765 68999 999999999877665554
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3.7e-48 Score=340.76 Aligned_cols=182 Identities=24% Similarity=0.338 Sum_probs=157.5
Q ss_pred CCCCCCeeeeeecCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--hh---HHHHhcCCCCCCcccee
Q 026305 7 ALSSCATFLFQTWLKSPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEE--GY---LKKVFYGSKGPTFGTKV 81 (240)
Q Consensus 7 ~l~w~~~~~~~~~p~~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~--~~---f~~~~~~~~~~~~~lrl 81 (240)
..+|++.|.+. | ||+.|++||+.+++|+++|.+++.+||++||++||++. ++ |.+.+.++ ..+.+|+
T Consensus 83 ~~D~kE~~~~~--p----~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~--~~~~lr~ 154 (280)
T 3on7_A 83 VKDIKEYYHVY--P----WGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANS--HKTLLRI 154 (280)
T ss_dssp CCCSCEEEEEC--T----TSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTC--SSCEEEE
T ss_pred cccHHHHHhcC--C----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCC--ccceEEE
Confidence 56888887653 3 77788999999999999999999999999999999873 32 55555432 2367999
Q ss_pred eeeCCCCCCC--cCCCcccccCCCCceEEeecCCCCeeEEE-eCCeEEEeccCCCcEEEecchhhHHHhCCccccccccc
Q 026305 82 SNYPPCPKPD--LIKGLRAHTDAGGIILLFQDDEVSGLQLL-KDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRV 158 (240)
Q Consensus 82 ~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRV 158 (240)
+|||||+.++ ..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|+||++|||+||+||+||||+|||+.|||
T Consensus 155 ~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRV 233 (280)
T 3on7_A 155 LHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRV 233 (280)
T ss_dssp EEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEE
T ss_pred EECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceE
Confidence 9999998765 46789999999999999997 69999999 58999999999999999999999999999999999999
Q ss_pred ccCC----CCCcccceeeecCCCCeEEecCccccccccCCCCCCCCccHHHHHHHHHhc
Q 026305 159 IAQT----EGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGL 213 (240)
Q Consensus 159 v~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~p~~y~~~~~~ey~~~~~~~ 213 (240)
++++ ..+|||++||++|+.|++|+| ++|++||++.+++.
T Consensus 234 v~~~~~~~~~~R~Si~~F~~P~~d~~i~p----------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 234 INPEGTDKTKSRISLPLFLHPHPSVVLSE----------------RYTADSYLMERLRE 276 (280)
T ss_dssp ECCTTCCTTSCEEECCEEECCCTTCBCSS----------------SCBHHHHHHHHHHH
T ss_pred eCCCCCCCCCCeEEEEEEEcCCCCCEECC----------------CccHHHHHHHHHHH
Confidence 8874 358999999999999999874 48999999988753
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.13 E-value=0.044 Score=46.42 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=52.8
Q ss_pred cceeeeeCCCCCCCcCCCcccccCCC-----------CceEEeecCC----CCe-eEEEeCCeEEEeccCCCcEEEecch
Q 026305 78 GTKVSNYPPCPKPDLIKGLRAHTDAG-----------GIILLFQDDE----VSG-LQLLKDDQWVDVPPMKHSIVINLGD 141 (240)
Q Consensus 78 ~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~qd~~----~~G-LqV~~~g~W~~V~p~~g~lvVniGd 141 (240)
.+++++|.+-. -..+|.|.. .+|+++.-++ .+| |.+.....=..|.|..|.+|+.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 46889997742 256777753 4566654322 234 656554334679999999998642
Q ss_pred hhHHHhCCcccccccccccCCCCCcccceeeec
Q 026305 142 QLEVITNGKYKSVLHRVIAQTEGNRMSIASFYN 174 (240)
Q Consensus 142 ~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 174 (240)
.++|+|.....+.|++++.+++
T Consensus 173 -----------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEEECEEEEEEEEE
T ss_pred -----------CCeEcCccccccCEEEEEEehh
Confidence 3689997655569999998864
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.91 E-value=1.2 Score=36.57 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=32.5
Q ss_pred CeEEEeccCCCcEEEecchhhHHHhCCcccccccccccCCC-CCcccceeeecCCC
Q 026305 123 DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE-GNRMSIASFYNPGS 177 (240)
Q Consensus 123 g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~~~~-~~R~Si~~F~~p~~ 177 (240)
..+..|.|.+|.+||.=+.+ .|.|..... ++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 35678999999999876643 799986543 58999999987654
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.32 E-value=1 Score=37.84 Aligned_cols=80 Identities=21% Similarity=0.390 Sum_probs=54.7
Q ss_pred ceeeeeCCCCCCCcCCCcccccCCC-----CceEEeecCC------CCe-eEEEeCC--eEEEeccCCCcEEEecchhhH
Q 026305 79 TKVSNYPPCPKPDLIKGLRAHTDAG-----GIILLFQDDE------VSG-LQLLKDD--QWVDVPPMKHSIVINLGDQLE 144 (240)
Q Consensus 79 lrl~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~------~~G-LqV~~~g--~W~~V~p~~g~lvVniGd~L~ 144 (240)
+.+.+|++.. -...+|.|.. .+|+++.-+. .+| |.+..++ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~G-----~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGNG-----TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSSS-----CCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCCC-----CcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 5688897611 1366888873 5777775322 144 6777643 6789999999999876431
Q ss_pred HHhCCcccccccccccCCCCCcccceeeec
Q 026305 145 VITNGKYKSVLHRVIAQTEGNRMSIASFYN 174 (240)
Q Consensus 145 ~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 174 (240)
-..|.|.. ..+.|+||+..+.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899865 4569999998764
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=87.30 E-value=1.4 Score=36.35 Aligned_cols=107 Identities=16% Similarity=0.142 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceeeeeCCCCCCCcCCCcccccCCCC-----------ceEEeecC--
Q 026305 46 VAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG-----------IILLFQDD-- 112 (240)
Q Consensus 46 la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~-----------lTlL~qd~-- 112 (240)
+..+|.+.++..+|++.+. .-.+++++|.+... ..+|.|+.. +|+++.-+
T Consensus 91 ~v~~i~~Ri~~~~gl~~~~-----------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~ 153 (216)
T 3itq_A 91 LTAKIEKRISSIMNVPASH-----------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDV 153 (216)
T ss_dssp HHHHHHHHHHHHHTSCGGG-----------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCC
T ss_pred HHHHHHHHHHHhcCceecc-----------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccC
Confidence 4455566666666665321 12377899976432 567888642 66666432
Q ss_pred CCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCc-ccccccccccCCCCCcccceeeec
Q 026305 113 EVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGK-YKSVLHRVIAQTEGNRMSIASFYN 174 (240)
Q Consensus 113 ~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~-~~s~~HRVv~~~~~~R~Si~~F~~ 174 (240)
..+|=-+..+. =+.|.|..|.+|+.-. ...||. -..++|+|.....+.|+++..+++
T Consensus 154 ~~GGeT~Fp~~-~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 154 EEGGETFFPKL-NLSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp SEECCEEETTT-TEEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred CcCceeEecCC-CCEEecCCCeEEEEec----cCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 23442233221 2678999999887543 111232 246799996544568999887765
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.84 E-value=0.79 Score=37.63 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=62.8
Q ss_pred HHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceeeeeCCCCCCCcCCCcccccCCC--------------CceEEee--
Q 026305 47 AEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG--------------GIILLFQ-- 110 (240)
Q Consensus 47 a~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g--------------~lTlL~q-- 110 (240)
+.+|.+.|+..+|++... ...+++++|.+-. ...+|.|.. .+|+|+.
T Consensus 79 ~~~i~~ri~~~~gl~~~~-----------~e~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLn 141 (224)
T 2jig_A 79 ISKIEKRVAQVTMIPLEN-----------HEGLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLT 141 (224)
T ss_dssp HHHHHHHHHHHHTCCGGG-----------BCCCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECS
T ss_pred HHHHHHHHHHHhCCCccc-----------ccceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEec
Confidence 344445555556776321 1236788997643 256777752 3677654
Q ss_pred cCCCCe-eEEEeCC-------------eEEEeccCCCcEEEecchhhHHHhCCcc-cccccccccCCCCCcccceeeecC
Q 026305 111 DDEVSG-LQLLKDD-------------QWVDVPPMKHSIVINLGDQLEVITNGKY-KSVLHRVIAQTEGNRMSIASFYNP 175 (240)
Q Consensus 111 d~~~~G-LqV~~~g-------------~W~~V~p~~g~lvVniGd~L~~~TnG~~-~s~~HRVv~~~~~~R~Si~~F~~p 175 (240)
|...+| +.+...+ .-+.|.|..|.+|+.-- ...||.. ..++|+|.....+.|+++..+++-
T Consensus 142 d~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 142 TVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp CCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred CCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 322344 3332211 14789999999887542 1123433 578999965545689998888753
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=80.85 E-value=2.4 Score=34.53 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=49.8
Q ss_pred ceeeeeCCCCCCCcCCCcccccCCCC-------c-eEEeecCCCCeeEEEeC----------CeEEEeccCCCcEEEecc
Q 026305 79 TKVSNYPPCPKPDLIKGLRAHTDAGG-------I-ILLFQDDEVSGLQLLKD----------DQWVDVPPMKHSIVINLG 140 (240)
Q Consensus 79 lrl~~Yp~~~~~~~~~g~~~HtD~g~-------l-TlL~qd~~~~GLqV~~~----------g~W~~V~p~~g~lvVniG 140 (240)
.-+|+|.+..+ ++++|.|-.. | ++-+. +..=+.+.+. +..+.+...+|+++|.-|
T Consensus 102 ~LvN~Y~~G~d-----~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 102 VLINRYKDGSD-----HICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEESSTTC-----CEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eEEEEECCCCC-----cccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45899977442 5889998631 1 22121 1233444431 257888999999999999
Q ss_pred hhhHHHhCCcccccccccccCC--CCCcccceee
Q 026305 141 DQLEVITNGKYKSVLHRVIAQT--EGNRMSIASF 172 (240)
Q Consensus 141 d~L~~~TnG~~~s~~HRVv~~~--~~~R~Si~~F 172 (240)
++=..|. |.|.... ...|+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 8777675 4543222 3589999985
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.63 E-value=3.4 Score=34.38 Aligned_cols=83 Identities=16% Similarity=0.116 Sum_probs=52.1
Q ss_pred ceeeeeCCCCCCCcCCCcccccCCC-------Cc-eEEeecCCCCeeEEEe-C----------CeEEEeccCCCcEEEec
Q 026305 79 TKVSNYPPCPKPDLIKGLRAHTDAG-------GI-ILLFQDDEVSGLQLLK-D----------DQWVDVPPMKHSIVINL 139 (240)
Q Consensus 79 lrl~~Yp~~~~~~~~~g~~~HtD~g-------~l-TlL~qd~~~~GLqV~~-~----------g~W~~V~p~~g~lvVni 139 (240)
.-+|+|.+-.+ ++++|.|-. .| ++-+. ...=+.+.. . +..+.+.-.+|+++|.-
T Consensus 128 ~LvN~Y~~G~d-----~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 128 LLCNLYRNEKD-----SVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEECSTTC-----CEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEECCCCC-----ceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 46899977432 688999953 11 22221 122244432 1 36889999999999999
Q ss_pred chhhHHHhCCcccccccccccCCCCCcccceeeec
Q 026305 140 GDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYN 174 (240)
Q Consensus 140 Gd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 174 (240)
|++=..|.-|.-+.. .....|+|+.|-..
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777765433211 12468999998753
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=76.04 E-value=2.6 Score=37.26 Aligned_cols=92 Identities=21% Similarity=0.212 Sum_probs=58.3
Q ss_pred ceeeeeCCCCCCCcCCCcccccCCC-C----ceEEeecCCCCeeEEEe-CCeEEEeccCCCcEEEecchhhHHHhCCccc
Q 026305 79 TKVSNYPPCPKPDLIKGLRAHTDAG-G----IILLFQDDEVSGLQLLK-DDQWVDVPPMKHSIVINLGDQLEVITNGKYK 152 (240)
Q Consensus 79 lrl~~Yp~~~~~~~~~g~~~HtD~g-~----lTlL~qd~~~~GLqV~~-~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~ 152 (240)
.-+|.|.+-. ++++|.|.. . |..|.- ....=+.+.. +|.++.+.-.+|+++|.-|++-..|..|.-+
T Consensus 200 ~lvN~Y~~G~------~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~ 272 (345)
T 3tht_A 200 MTINQYEPGQ------GIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITC 272 (345)
T ss_dssp EEEEEECTTC------CEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEECC
T ss_pred EEEEEecCCC------CEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCCc
Confidence 5688997632 689999974 1 111111 1122344443 4779999999999999999998888766444
Q ss_pred ccccccc------------------cCCCCCcccceeeecCCC
Q 026305 153 SVLHRVI------------------AQTEGNRMSIASFYNPGS 177 (240)
Q Consensus 153 s~~HRVv------------------~~~~~~R~Si~~F~~p~~ 177 (240)
-...-+- ....+.|+|+.|-..+..
T Consensus 273 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 273 RKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred ccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 2222110 012346999999876655
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=74.26 E-value=5.2 Score=32.74 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=48.6
Q ss_pred ceeeeeCCCCCCCcCCCcccccCC-C------CceEEeecCCCCeeEEEe---CCeEEEeccCCCcEEEecchhhHHHhC
Q 026305 79 TKVSNYPPCPKPDLIKGLRAHTDA-G------GIILLFQDDEVSGLQLLK---DDQWVDVPPMKHSIVINLGDQLEVITN 148 (240)
Q Consensus 79 lrl~~Yp~~~~~~~~~g~~~HtD~-g------~lTlL~qd~~~~GLqV~~---~g~W~~V~p~~g~lvVniGd~L~~~Tn 148 (240)
.-+|+|.+-. ++++|.|- . .+++-+. ...=+.+.+ .+....+.-.+|+++|.-|++- .|
T Consensus 107 ~LvN~Y~~G~------~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 107 CLINRYAPGA------KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEECTTC------CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEcCCC------CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 4588997632 68999993 2 1122222 123344432 2678899999999999988762 23
Q ss_pred CcccccccccccCC-------CCCcccceeee
Q 026305 149 GKYKSVLHRVIAQT-------EGNRMSIASFY 173 (240)
Q Consensus 149 G~~~s~~HRVv~~~-------~~~R~Si~~F~ 173 (240)
.|.|.... .+.|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36664332 23699999864
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.38 E-value=12 Score=25.25 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHh
Q 026305 30 GHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVF 69 (240)
Q Consensus 30 ~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~ 69 (240)
.+.+..++.||..-.+-...-+..||+.+||+.+.+..-|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4668899999999888888889999999999998876655
No 17
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=39.05 E-value=27 Score=21.41 Aligned_cols=22 Identities=9% Similarity=0.222 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhhcCCChhh
Q 026305 43 LEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 43 ~~~la~~ll~~la~~Lgl~~~~ 64 (240)
-.+++..|.+++++.||.++++
T Consensus 19 k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 19 LKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHhCcCccc
Confidence 4578999999999999999865
No 18
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=36.39 E-value=42 Score=28.79 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=17.1
Q ss_pred ccccccccCCCCCcccceeee
Q 026305 153 SVLHRVIAQTEGNRMSIASFY 173 (240)
Q Consensus 153 s~~HRVv~~~~~~R~Si~~F~ 173 (240)
+..|+|.+.+...|+.+.+=+
T Consensus 155 ~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp TSCEEEEESSSSCCCEEEEEE
T ss_pred CCeeEEEcCCCCCeEEEEEEe
Confidence 358999998888999987654
No 19
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=35.18 E-value=29 Score=21.64 Aligned_cols=22 Identities=18% Similarity=0.151 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHhhcCCChhh
Q 026305 43 LEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 43 ~~~la~~ll~~la~~Lgl~~~~ 64 (240)
-.+++..|.+++++.||.++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHhCCCccc
Confidence 3578899999999999999865
No 20
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=30.55 E-value=51 Score=20.18 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhhcCCChhh
Q 026305 42 ELEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~ 64 (240)
+-.+++..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34578999999999999999754
No 21
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.50 E-value=46 Score=20.37 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhhcCCChhh
Q 026305 42 ELEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~ 64 (240)
+-.+++..|.+++++.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 33578999999999999999754
No 22
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=26.40 E-value=66 Score=20.19 Aligned_cols=23 Identities=26% Similarity=0.258 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhhcCCChhh
Q 026305 42 ELEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~ 64 (240)
+-.+|+..|.+++.+.||++++.
T Consensus 15 qk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 15 EVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34578999999999999999764
No 23
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=25.73 E-value=56 Score=17.59 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=10.8
Q ss_pred eeEEEeCCeEEEec
Q 026305 116 GLQLLKDDQWVDVP 129 (240)
Q Consensus 116 GLqV~~~g~W~~V~ 129 (240)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35678899999754
No 24
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=23.76 E-value=79 Score=19.99 Aligned_cols=23 Identities=13% Similarity=0.257 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhhcCCChhh
Q 026305 42 ELEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~ 64 (240)
+-.+|+..|.+++++.||++++.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 34578899999999999999764
No 25
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=22.55 E-value=61 Score=20.26 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhhcCCChhh
Q 026305 43 LEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 43 ~~~la~~ll~~la~~Lgl~~~~ 64 (240)
-.+|+..|.+++++.||++++.
T Consensus 15 K~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 15 KREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHhCcCcce
Confidence 3578999999999999999754
No 26
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=22.31 E-value=80 Score=20.61 Aligned_cols=24 Identities=8% Similarity=0.295 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhhcCCChhhH
Q 026305 42 ELEKVAEQLLELLCENLGLEEGYL 65 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~f 65 (240)
+-.+++..|.+++++.||++++..
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 345789999999999999998653
No 27
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=21.66 E-value=89 Score=20.08 Aligned_cols=23 Identities=9% Similarity=0.050 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhcCCChhh
Q 026305 42 ELEKVAEQLLELLCENLGLEEGY 64 (240)
Q Consensus 42 ~~~~la~~ll~~la~~Lgl~~~~ 64 (240)
.-.+|+..|.+++++.||.+++.
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34578899999999999999765
Done!