BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026306
(240 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489662|gb|ABK96632.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 161
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 133/155 (85%), Positives = 141/155 (90%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
MEE S RM+ HLR TCKYYTGYPKDLGPSRVIHFTSEREFV +LHQGYPVVVAFTIRG
Sbjct: 1 MEEKSFLDRMLGHLRGTCKYYTGYPKDLGPSRVIHFTSEREFVQLLHQGYPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N TKHLDRVLEEAAAEFYPHVK +RVECPKYPGFC+TRQRKEYPFIEIFHSPEQA+ + R
Sbjct: 61 NYTKHLDRVLEEAAAEFYPHVKVLRVECPKYPGFCITRQRKEYPFIEIFHSPEQAANQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY+VKVLPFNYD SAYGFRE+FKR GIR
Sbjct: 121 VADPNITKYSVKVLPFNYDQSAYGFREFFKRHGIR 155
>gi|224142713|ref|XP_002324699.1| predicted protein [Populus trichocarpa]
gi|222866133|gb|EEF03264.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 132/155 (85%), Positives = 140/155 (90%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
MEE S RM+ HLR TCKYYTGYPK LGPSRVIHFTSEREFV +LHQGYPVVVAFTIRG
Sbjct: 1 MEEKSFLDRMLGHLRETCKYYTGYPKYLGPSRVIHFTSEREFVQLLHQGYPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N TKHLDRVLEEAAAEFYPHVK +RVECPKYPGFC+TRQRKEYPFIEIFHSPEQA+ + R
Sbjct: 61 NYTKHLDRVLEEAAAEFYPHVKVLRVECPKYPGFCITRQRKEYPFIEIFHSPEQAANQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY+VKVLPFNYD SAYGFRE+FKR GIR
Sbjct: 121 VADPNITKYSVKVLPFNYDQSAYGFREFFKRHGIR 155
>gi|351726582|ref|NP_001238667.1| uncharacterized protein LOC100305658 [Glycine max]
gi|255626219|gb|ACU13454.1| unknown [Glycine max]
Length = 160
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 143/155 (92%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
ME+ S F RMISHLR+TCKYYTGYPKDLGPSRVIHFTSEREFV +LH+G+PVVVAFTIRG
Sbjct: 1 MEDPSFFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVKLLHEGFPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T+HLD+VLEE+AAEFYP+VKFMRVECPKYPGFC+TRQ+KEYPFIEIFHSP Q + + R
Sbjct: 61 NYTRHLDKVLEESAAEFYPNVKFMRVECPKYPGFCITRQKKEYPFIEIFHSPTQTANQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY VKVLPFNYD+SAYGFRE+FK+ GIR
Sbjct: 121 VADPNITKYNVKVLPFNYDVSAYGFREFFKQHGIR 155
>gi|224087323|ref|XP_002308120.1| predicted protein [Populus trichocarpa]
gi|222854096|gb|EEE91643.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/159 (80%), Positives = 138/159 (86%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
MEE S RM+ HLR TCKY TGYPKDLG SRVIHFTSEREFV +LHQGYPVVVAFTIRG
Sbjct: 1 MEEKSFLDRMLGHLRETCKYSTGYPKDLGLSRVIHFTSEREFVQLLHQGYPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N TKHLD+VLE AAAEFYPHVKF+RVECPKYPGFC+TRQRKEYPFIEIFHSPEQA+ R R
Sbjct: 61 NYTKHLDQVLEVAAAEFYPHVKFLRVECPKYPGFCITRQRKEYPFIEIFHSPEQAANRGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQK 159
PNITKY+ K LPFNYDLSAYGFRE+FKR GI+ Q+
Sbjct: 121 VGGPNITKYSAKALPFNYDLSAYGFREFFKRYGIQSSQE 159
>gi|356504299|ref|XP_003520934.1| PREDICTED: uncharacterized protein LOC100808588 [Glycine max]
Length = 160
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/155 (80%), Positives = 143/155 (92%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
ME+ S F RMISHLR+TC +YTGYPKDLGPS+VIHFTSEREFV++LH+G+PVVVAFTIRG
Sbjct: 1 MEDPSFFDRMISHLRATCMHYTGYPKDLGPSQVIHFTSEREFVNLLHEGFPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T+HLD+VLEE+AAEFYP+VKFMRVECPKYPGFC+TRQ+KEYPF+EIFHSP A+ + R
Sbjct: 61 NYTRHLDKVLEESAAEFYPNVKFMRVECPKYPGFCITRQKKEYPFVEIFHSPTHAANQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY VKVLPFNYD+SAYGFRE+FKR GIR
Sbjct: 121 VADPNITKYNVKVLPFNYDVSAYGFREFFKRHGIR 155
>gi|388504586|gb|AFK40359.1| unknown [Medicago truncatula]
Length = 160
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/155 (79%), Positives = 139/155 (89%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
ME+ S F+RMI HLR TCKYYTGYPKDLGPS+VIHFTSEREFV++ H+G+PVVVAFTIRG
Sbjct: 1 MEDSSFFNRMIGHLRGTCKYYTGYPKDLGPSQVIHFTSEREFVNLPHEGFPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T+HLD+VLEEAAAEFYPHVKFMRVECPKYPGFC++RQ+KEYPFIEIFHSP + + R
Sbjct: 61 NYTEHLDKVLEEAAAEFYPHVKFMRVECPKYPGFCISRQKKEYPFIEIFHSPTHVANQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY VKV+PFNYD+S YGFRE FKR GIR
Sbjct: 121 VADPNITKYNVKVMPFNYDVSPYGFREIFKRYGIR 155
>gi|255584477|ref|XP_002532968.1| conserved hypothetical protein [Ricinus communis]
gi|223527261|gb|EEF29419.1| conserved hypothetical protein [Ricinus communis]
Length = 160
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/155 (79%), Positives = 138/155 (89%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
MEE S +MI+HLR++CKYYTGYPKD+G SRVIHFTSEREFV +LH+G+PV VAFTIRG
Sbjct: 1 MEEQSFLDKMINHLRASCKYYTGYPKDIGSSRVIHFTSEREFVQLLHEGHPVAVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N TKHLDRVLEEAAAEFYPHVKF+RVECPKYPGFC+TRQRKEYPFIEIFHSPE A + +
Sbjct: 61 NYTKHLDRVLEEAAAEFYPHVKFVRVECPKYPGFCMTRQRKEYPFIEIFHSPEHAGNQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
DP ITKY+VKVLPFNYDLSAYGFRE+FKR I+
Sbjct: 121 VIDPGITKYSVKVLPFNYDLSAYGFREFFKRHKIQ 155
>gi|225470680|ref|XP_002269939.1| PREDICTED: uncharacterized protein LOC100267538 [Vitis vinifera]
gi|296090289|emb|CBI40108.3| unnamed protein product [Vitis vinifera]
Length = 155
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/155 (80%), Positives = 136/155 (87%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M E S F MI LR+ CKYYTGYPKDLGPSRVIHFTSER+FV +LH+G+PVVVAFTIR
Sbjct: 1 MGEPSFFDGMIRQLRAKCKYYTGYPKDLGPSRVIHFTSERQFVQLLHEGHPVVVAFTIRC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T +LD+VLEEAA EFYP VKFMRVECPKYPGFC+TRQRKEYPFIEIFHSPEQAS + R
Sbjct: 61 NYTNNLDKVLEEAAVEFYPQVKFMRVECPKYPGFCITRQRKEYPFIEIFHSPEQASNQGR 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
ADPNITKY+VKVLPF YDLSAYGFRE+FKR GI+
Sbjct: 121 VADPNITKYSVKVLPFTYDLSAYGFREFFKRHGIK 155
>gi|297793245|ref|XP_002864507.1| hypothetical protein ARALYDRAFT_357944 [Arabidopsis lyrata subsp.
lyrata]
gi|297310342|gb|EFH40766.1| hypothetical protein ARALYDRAFT_357944 [Arabidopsis lyrata subsp.
lyrata]
Length = 160
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 137/155 (88%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + + RM+ LRSTCKYY+GYPKDLGPSRV+HFTSEREFV +LHQGYPVVVAFTIR
Sbjct: 1 MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T+HLDR+LEEAAAEFYP++KFMRVECPKYPGFC+TRQ+ EYPFIEIFHSP+QA +
Sbjct: 61 NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKSEYPFIEIFHSPQQAGNEGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
DPNIT+Y+VKV+P+NYD+S YGFRE+FKRQG+R
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGVR 155
>gi|388500156|gb|AFK38144.1| unknown [Lotus japonicus]
Length = 160
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/154 (77%), Positives = 138/154 (89%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
ME+ S F MI HLRSTCKYYTGYPK LGPSRVIHFTSEREFV +LH+G+PVVVAFTIRG
Sbjct: 1 MEDSSFFDMMIGHLRSTCKYYTGYPKYLGPSRVIHFTSEREFVKLLHEGFPVVVAFTIRG 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
+ T+HLD+VL+EAAAEFYPHVKFMRVECPKYPGFC+TRQ+KEYPFIEIF SP QA+ + +
Sbjct: 61 SYTRHLDKVLDEAAAEFYPHVKFMRVECPKYPGFCITRQKKEYPFIEIFQSPTQAANQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGI 154
ADPN+TKY VKVLPF+ D+SAYGFRE+FKR G+
Sbjct: 121 VADPNVTKYNVKVLPFHNDVSAYGFREFFKRHGL 154
>gi|15242070|ref|NP_200533.1| Thioredoxin-like domain-containing protein [Arabidopsis thaliana]
gi|8777356|dbj|BAA96946.1| unnamed protein product [Arabidopsis thaliana]
gi|124301042|gb|ABN04773.1| At5g57230 [Arabidopsis thaliana]
gi|332009485|gb|AED96868.1| Thioredoxin-like domain-containing protein [Arabidopsis thaliana]
Length = 160
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 136/155 (87%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + + RM+ LRSTCKYY+GYPKDLGPSRV+HFTSEREFV +LHQGYPVVVAFTIR
Sbjct: 1 MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N T+HLDR+LEEAAAEFYP++KFMRVECPKYPGFC+TRQ+ EYPFIEIFHSP+ A +
Sbjct: 61 NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKNEYPFIEIFHSPQHAGNEGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIR 155
DPNIT+Y+VKV+P+NYD+S YGFRE+FKRQG+R
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGVR 155
>gi|449465270|ref|XP_004150351.1| PREDICTED: uncharacterized protein LOC101222987 [Cucumis sativus]
gi|449516161|ref|XP_004165116.1| PREDICTED: uncharacterized LOC101222987 [Cucumis sativus]
Length = 157
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 137/154 (88%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + + ++ HLRSTCKYYTG+PKDLGPSRVIHFTSEREFV +LH+GYPVVVAFTIR
Sbjct: 1 MGDPTALDTLLRHLRSTCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTIRS 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
N +KHLD VLEEAA EFYP+VKFMRVECPKYPGFC++RQRKEYPFIE+FHSP+QAS++ +
Sbjct: 61 NYSKHLDNVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGI 154
AD N+TKY+VKVLPFNYD SAYGFRE+FKR GI
Sbjct: 121 IADSNVTKYSVKVLPFNYDTSAYGFREFFKRHGI 154
>gi|242053557|ref|XP_002455924.1| hypothetical protein SORBIDRAFT_03g027350 [Sorghum bicolor]
gi|241927899|gb|EES01044.1| hypothetical protein SORBIDRAFT_03g027350 [Sorghum bicolor]
Length = 160
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/164 (70%), Positives = 139/164 (84%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + S RM+S LRSTCKYYTGYPKDLGPSR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MMDESFLDRMVSQLRSTCKYYTGYPKDLGPSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD+VLEEAAA+FYPH+KF+RVECPKYPGFCLTRQR EYPF+E+F++PEQA+++ +
Sbjct: 61 TYTQHLDKVLEEAAAKFYPHIKFVRVECPKYPGFCLTRQRNEYPFVEVFYNPEQAASQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPNITKY+VKVLPFNYD S YGFREYF++ G KY +TN
Sbjct: 121 SVDPNITKYSVKVLPFNYDQSVYGFREYFRKHGF----KYSETN 160
>gi|195654963|gb|ACG46949.1| hypothetical protein [Zea mays]
Length = 160
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 137/164 (83%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + S RM+S LRSTCKYYTGYPKDLG SR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MMDESFLDRMVSQLRSTCKYYTGYPKDLGRSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD+VLEEAAA+FYPH+KF+RVECPKYPGFCLTRQR EYPF+E+F++PEQA++ +
Sbjct: 61 TYTQHLDKVLEEAAAKFYPHIKFVRVECPKYPGFCLTRQRNEYPFVEVFYNPEQAASPGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPNITKY+VKVLPFNYD S YGFREYFKR G KY +TN
Sbjct: 121 SVDPNITKYSVKVLPFNYDQSVYGFREYFKRHGF----KYSETN 160
>gi|242061190|ref|XP_002451884.1| hypothetical protein SORBIDRAFT_04g009220 [Sorghum bicolor]
gi|241931715|gb|EES04860.1| hypothetical protein SORBIDRAFT_04g009220 [Sorghum bicolor]
Length = 160
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 136/164 (82%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M S RM S LRSTCKYYTGYPKDLG SR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MMNESFLDRMASQLRSTCKYYTGYPKDLGSSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
+ T+HLD++LEEAAA FYPHVKF+RVECPKYPGFCLTRQR EYPF+E+F+SPEQAS++ +
Sbjct: 61 SYTQHLDKLLEEAAATFYPHVKFVRVECPKYPGFCLTRQRNEYPFVEVFYSPEQASSQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPNITKY+VKVLPFNYD S YGFREYF++ G KY +TN
Sbjct: 121 SVDPNITKYSVKVLPFNYDQSVYGFREYFRKHGF----KYSETN 160
>gi|226532772|ref|NP_001146717.1| uncharacterized protein LOC100280319 [Zea mays]
gi|195629556|gb|ACG36419.1| hypothetical protein [Zea mays]
gi|219886053|gb|ACL53401.1| unknown [Zea mays]
gi|219888479|gb|ACL54614.1| unknown [Zea mays]
gi|224035523|gb|ACN36837.1| unknown [Zea mays]
gi|238009178|gb|ACR35624.1| unknown [Zea mays]
gi|414881765|tpg|DAA58896.1| TPA: hypothetical protein ZEAMMB73_354508 [Zea mays]
gi|414881766|tpg|DAA58897.1| TPA: hypothetical protein ZEAMMB73_354508 [Zea mays]
gi|414881767|tpg|DAA58898.1| TPA: hypothetical protein ZEAMMB73_354508 [Zea mays]
gi|414881768|tpg|DAA58899.1| TPA: hypothetical protein ZEAMMB73_354508 [Zea mays]
Length = 160
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/164 (70%), Positives = 137/164 (83%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + S RM+S LRSTCKYYTGYPKDLG SR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MMDESFLDRMVSQLRSTCKYYTGYPKDLGRSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD+VLEEAAA+FYPH+KF+RVECPKYPGFCLTRQR EYPF+E+F++PEQA++ +
Sbjct: 61 TYTQHLDKVLEEAAAKFYPHIKFVRVECPKYPGFCLTRQRNEYPFVEVFYNPEQAASPGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPNITKY+VKVLPFNYD S YGFREYFK+ G KY +TN
Sbjct: 121 SVDPNITKYSVKVLPFNYDQSVYGFREYFKKHGF----KYSETN 160
>gi|115468108|ref|NP_001057653.1| Os06g0482200 [Oryza sativa Japonica Group]
gi|51535066|dbj|BAD37655.1| unknown protein [Oryza sativa Japonica Group]
gi|113595693|dbj|BAF19567.1| Os06g0482200 [Oryza sativa Japonica Group]
gi|215767528|dbj|BAG99756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198195|gb|EEC80622.1| hypothetical protein OsI_22996 [Oryza sativa Indica Group]
gi|222635597|gb|EEE65729.1| hypothetical protein OsJ_21374 [Oryza sativa Japonica Group]
Length = 160
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 137/164 (83%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + S RM+S LRSTC+YYTGYPKDLGPSR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MADGSFLDRMVSQLRSTCRYYTGYPKDLGPSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD+VLEEAAA F+PHVKF+RVECPKYPGFCLTRQ+ EYPFIE+F++PEQA++ +
Sbjct: 61 TYTQHLDKVLEEAAATFHPHVKFVRVECPKYPGFCLTRQKNEYPFIEVFYNPEQAASPGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPN+TKY+VKVLPFNYD S YGFREYFK+ G KY +TN
Sbjct: 121 VVDPNVTKYSVKVLPFNYDQSMYGFREYFKKHGF----KYFETN 160
>gi|125574112|gb|EAZ15396.1| hypothetical protein OsJ_30806 [Oryza sativa Japonica Group]
Length = 160
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/164 (68%), Positives = 135/164 (82%), Gaps = 4/164 (2%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M + S RM+S LRS C+YYTGYPKDLGPSR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MADGSFLDRMVSQLRSACRYYTGYPKDLGPSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T HLD+VLEEAAA F+PHVKF+RVECPKYPGFCLTRQ+ EYPFIE+F++PEQA++ +
Sbjct: 61 TYTHHLDKVLEEAAATFHPHVKFVRVECPKYPGFCLTRQKNEYPFIEVFYNPEQAASPGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
DPN+TKY+VKVLPFNYD S YGFREYFK+ G KY +TN
Sbjct: 121 AVDPNVTKYSVKVLPFNYDQSVYGFREYFKKHGF----KYFETN 160
>gi|357124739|ref|XP_003564055.1| PREDICTED: uncharacterized protein LOC100835923 [Brachypodium
distachyon]
Length = 160
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/156 (69%), Positives = 132/156 (84%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M E + F RM+S LRST KYYTGYPKDLGPSR+I FTSER+FV +L++G PVVVAFTI+
Sbjct: 1 MAEETFFDRMVSQLRSTSKYYTGYPKDLGPSRIIPFTSERQFVQLLNEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD+VLEEAA+ FYPH+KF+RVECPKYPGFCLTRQ+ EYPF+E+F++PEQA+ +
Sbjct: 61 TYTQHLDKVLEEAASTFYPHIKFVRVECPKYPGFCLTRQKTEYPFLEVFYNPEQAAKPGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRH 156
DPNITKY+ KVLPFNYD S YGFREYFK+ G ++
Sbjct: 121 IVDPNITKYSAKVLPFNYDQSVYGFREYFKKYGFKY 156
>gi|116782589|gb|ABK22562.1| unknown [Picea sitchensis]
Length = 167
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 137/165 (83%), Gaps = 1/165 (0%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
MEE +F+++ISHLRS +YYTGYP+D+GPSRVI F SER+FV +LH+GYP+VVAFT+R
Sbjct: 1 MEESPVFNKLISHLRSVSRYYTGYPRDIGPSRVIEFQSERQFVQLLHEGYPIVVAFTLRC 60
Query: 61 NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRER 120
T+HLD++LE +AAEFYPH++FMRVECPKYPGFC+ RQRK+YPFIEIFHSP QA + +
Sbjct: 61 PYTRHLDKMLESSAAEFYPHIRFMRVECPKYPGFCIARQRKDYPFIEIFHSPMQAERQGK 120
Query: 121 GADPNITKYAVKVLPFNYDLSAYGFREYFKRQGIRHL-QKYLKTN 164
D +T+Y+VKVLPFNYDLS YGFRE+FK GI + QK ++ N
Sbjct: 121 VFDAPVTRYSVKVLPFNYDLSPYGFREFFKHNGISAISQKPVQEN 165
>gi|168052638|ref|XP_001778747.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669866|gb|EDQ56445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 116/142 (81%)
Query: 10 MISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRGNLTKHLDRV 69
++ HL+ +YYTGYP++ SRV+ F SER+FV +LHQG PV VAFT++ T+ DRV
Sbjct: 12 LLDHLKEFSRYYTGYPREERVSRVLEFKSERQFVELLHQGEPVAVAFTLKCPWTRRFDRV 71
Query: 70 LEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGADPNITKY 129
LE+AAAE+YPH+KF+RV+CPKYPGFC+ RQRK+YPF+EIFHSP+ A T+E D +I++Y
Sbjct: 72 LEDAAAEWYPHIKFVRVDCPKYPGFCIARQRKDYPFVEIFHSPKPAHTQEGVKDRSISRY 131
Query: 130 AVKVLPFNYDLSAYGFREYFKR 151
+V V P+NYD+SAYGFRE+FKR
Sbjct: 132 SVNVTPYNYDMSAYGFREFFKR 153
>gi|326512296|dbj|BAJ99503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 67/80 (83%)
Query: 1 MEEHSIFHRMISHLRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG 60
M E S F RM+S LRST KYYTGYPKDLGPSR+I FTSER+FV +LH+G PVVVAFTI+
Sbjct: 1 MAEASFFDRMVSQLRSTSKYYTGYPKDLGPSRIIPFTSERQFVQLLHEGRPVVVAFTIKC 60
Query: 61 NLTKHLDRVLEEAAAEFYPH 80
T+HLD+VLEEAAA FYPH
Sbjct: 61 TYTQHLDKVLEEAAATFYPH 80
>gi|452818907|gb|EME26052.1| hypothetical protein Gasu_62970 [Galdieria sulphuraria]
Length = 135
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 14 LRSTCKYYTGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEE 72
L +YY GYP+ PSRVI F + + +L QG PV+VA +I G + +H ++ E+
Sbjct: 18 LLEWSRYYLGYPRP--PSRVIEFRGRKHLIELLKQGKPVLVALSIHGFSRCEHFRKMFEQ 75
Query: 73 AAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFH 110
A+ EF V F+ V C + FC +RQ P++E+F
Sbjct: 76 ASFEF-DQVHFVWVNCGQAIEFCRSRQPPAMPWMELFQ 112
>gi|320167547|gb|EFW44446.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 222
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 31 SRVIHFTSEREFVHILHQ-GYPVVVAFTIRGN-LTKHLDRVLEEAAAEFYPHVKFMRVEC 88
S V +T+E +F LH+ G P +V ++ G+ ++ AAEF+ V F+ V+C
Sbjct: 86 SPVRQWTTEADFARRLHESGKPAIVVLSVNGDAFSEQFKPHFYRTAAEFHEAVDFVWVKC 145
Query: 89 PKYPGFCLTRQRKEYPFIEIFHSPEQASTRERG--ADPNITKYAVKVLPFNYDLSAYGFR 146
FC +RQ +P +E++ S R G +Y V + PF +S YG R
Sbjct: 146 VNAQAFCRSRQVITFPHVELYES------RPEGEHVPGQPRRYRVSITPFPLHMSYYGLR 199
Query: 147 EYFKRQGIRHLQKYLKTNSAACTS 170
E +++ + Y ++N AA S
Sbjct: 200 EMLRQKDMLGSFGY-RSNGAADDS 222
>gi|290992959|ref|XP_002679101.1| predicted protein [Naegleria gruberi]
gi|284092716|gb|EFC46357.1| predicted protein [Naegleria gruberi]
Length = 187
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 19 KYY--TGYPKDLGPSRVIHFTSEREFVHILHQGYPVVVAFTIRGNLT-KHLDRVLEEAAA 75
KYY T +P G VI SE F I++QG PV AFT T ++L + + E A
Sbjct: 39 KYYKTTDHPLPRGNVTVIQ--SEEHFDEIINQGKPVAAAFTAPYKYTCEYLKKKIREIAP 96
Query: 76 EFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQAS 116
+ F+ V+C P C R P I++F+ P A+
Sbjct: 97 HYKDDANFVEVDCSITPKVCYERNIVSIPAIDVFYKPLGAT 137
>gi|359483462|ref|XP_002270415.2| PREDICTED: monothiol glutaredoxin-S17-like isoform 1 [Vitis
vinifera]
Length = 514
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 38 SEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCL 96
S+ E +++ QG PV++ F +KH+D+V + +F PH F RVE + P
Sbjct: 10 SKEELDNVVRQGAPVILHFWASWCEASKHMDQVFSHLSTDF-PHAVFFRVEAEEQPVISE 68
Query: 97 TRQRKEYPFIEIFHSPEQASTRERGADPN-----ITKYAVKVLP 135
P+ F + T E GADP+ + K A + P
Sbjct: 69 AYSVSAVPYFVFFKDGKTVDTME-GADPSSLANKVAKVAGSINP 111
>gi|403669532|ref|ZP_10934736.1| hypothetical protein KJC8E_11905 [Kurthia sp. JC8E]
Length = 235
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFH------SPEQAS 116
+ D+++EE A F PH+ + + P Y GF RQ +++ + I + +Q
Sbjct: 34 VEQFDQIIEEFNA-FNPHIVLLDINLPAYDGFYWCRQLRQFTTVPIIYISARSGEMDQIF 92
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PF+Y++ + + +R
Sbjct: 93 ALENGGDDFITK------PFHYEIVLAKIKSHLRR 121
>gi|329926114|ref|ZP_08280705.1| response regulator protein GraR [Paenibacillus sp. HGF5]
gi|328939388|gb|EGG35742.1| response regulator protein GraR [Paenibacillus sp. HGF5]
Length = 230
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 60 GNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIF------HSPE 113
GN+ + D VLE+ E PH+ + V P + G+ RQ + I +P+
Sbjct: 28 GNIVEDFDHVLEQFH-EMKPHLVLLDVNLPSFDGYYWCRQIRSVSTCPIMFISARNGTPD 86
Query: 114 QASTRERGADPNITKYAVKVLPFNYDL 140
Q E GAD ITK PF YD+
Sbjct: 87 QLRALENGADDYITK------PFAYDI 107
>gi|152977169|ref|YP_001376686.1| two component transcriptional regulator [Bacillus cytotoxicus NVH
391-98]
gi|152025921|gb|ABS23691.1| two component transcriptional regulator, winged helix family
[Bacillus cytotoxicus NVH 391-98]
Length = 231
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY V+A ++ D +LE A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVIA--------ENFDDILESFNA-VNPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|217072240|gb|ACJ84480.1| unknown [Medicago truncatula]
Length = 491
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 38 SEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCL 96
S+ E ++ G P V+ F +KH+D++ A +F PH F+RVE + P
Sbjct: 10 SKSELDEVVRGGSPAVLHFWASWCEASKHMDQLFSHLAIDF-PHTHFLRVEAEEQPEISE 68
Query: 97 TRQRKEYPFIEIFHSPEQASTRERGADPN 125
PF F + T E GADP+
Sbjct: 69 AYSVSAVPFFVFFKDGKTVDTLE-GADPS 96
>gi|358346673|ref|XP_003637390.1| Monothiol glutaredoxin-S17 [Medicago truncatula]
gi|355503325|gb|AES84528.1| Monothiol glutaredoxin-S17 [Medicago truncatula]
Length = 491
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 38 SEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCL 96
S+ E ++ G P V+ F +KH+D++ A +F PH F+RVE + P
Sbjct: 10 SKSELDEVVRGGSPAVLHFWASWCEASKHMDQLFSHLAIDF-PHTHFLRVEAEEQPEISE 68
Query: 97 TRQRKEYPFIEIFHSPEQASTRERGADPN 125
PF F + T E GADP+
Sbjct: 69 AYSVSAVPFFVFFKDGKTVDTLE-GADPS 96
>gi|423583052|ref|ZP_17559163.1| hypothetical protein IIA_04567 [Bacillus cereus VD014]
gi|401210361|gb|EJR17113.1| hypothetical protein IIA_04567 [Bacillus cereus VD014]
Length = 231
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMVKIKGQLRR 118
>gi|423484430|ref|ZP_17461120.1| hypothetical protein IEQ_04208 [Bacillus cereus BAG6X1-2]
gi|401138590|gb|EJQ46158.1| hypothetical protein IEQ_04208 [Bacillus cereus BAG6X1-2]
Length = 231
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VV T++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVV--------TENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|47568009|ref|ZP_00238715.1| DNA-binding response regulator [Bacillus cereus G9241]
gi|229099317|ref|ZP_04230248.1| DNA-binding response regulator [Bacillus cereus Rock3-29]
gi|229105475|ref|ZP_04236117.1| DNA-binding response regulator [Bacillus cereus Rock3-28]
gi|229118328|ref|ZP_04247684.1| DNA-binding response regulator [Bacillus cereus Rock1-3]
gi|301056347|ref|YP_003794558.1| DNA-binding response regulator [Bacillus cereus biovar anthracis
str. CI]
gi|407707361|ref|YP_006830946.1| hypothetical protein MC28_4125 [Bacillus thuringiensis MC28]
gi|423377310|ref|ZP_17354594.1| hypothetical protein IC9_00663 [Bacillus cereus BAG1O-2]
gi|423440422|ref|ZP_17417328.1| hypothetical protein IEA_00752 [Bacillus cereus BAG4X2-1]
gi|423449429|ref|ZP_17426308.1| hypothetical protein IEC_04037 [Bacillus cereus BAG5O-1]
gi|423463485|ref|ZP_17440253.1| hypothetical protein IEK_00672 [Bacillus cereus BAG6O-1]
gi|423532838|ref|ZP_17509256.1| hypothetical protein IGI_00670 [Bacillus cereus HuB2-9]
gi|423541898|ref|ZP_17518289.1| hypothetical protein IGK_03990 [Bacillus cereus HuB4-10]
gi|423548134|ref|ZP_17524492.1| hypothetical protein IGO_04569 [Bacillus cereus HuB5-5]
gi|423549407|ref|ZP_17525734.1| hypothetical protein IGW_00038 [Bacillus cereus ISP3191]
gi|423614714|ref|ZP_17590548.1| hypothetical protein IIO_00040 [Bacillus cereus VD115]
gi|423622074|ref|ZP_17597852.1| hypothetical protein IK3_00672 [Bacillus cereus VD148]
gi|47555312|gb|EAL13657.1| DNA-binding response regulator [Bacillus cereus G9241]
gi|228665158|gb|EEL20644.1| DNA-binding response regulator [Bacillus cereus Rock1-3]
gi|228677942|gb|EEL32177.1| DNA-binding response regulator [Bacillus cereus Rock3-28]
gi|228684135|gb|EEL38082.1| DNA-binding response regulator [Bacillus cereus Rock3-29]
gi|300378516|gb|ADK07420.1| DNA-binding response regulator [Bacillus cereus biovar anthracis
str. CI]
gi|401128102|gb|EJQ35804.1| hypothetical protein IEC_04037 [Bacillus cereus BAG5O-1]
gi|401169718|gb|EJQ76962.1| hypothetical protein IGK_03990 [Bacillus cereus HuB4-10]
gi|401176801|gb|EJQ83995.1| hypothetical protein IGO_04569 [Bacillus cereus HuB5-5]
gi|401191160|gb|EJQ98183.1| hypothetical protein IGW_00038 [Bacillus cereus ISP3191]
gi|401262172|gb|EJR68316.1| hypothetical protein IK3_00672 [Bacillus cereus VD148]
gi|401262370|gb|EJR68512.1| hypothetical protein IIO_00040 [Bacillus cereus VD115]
gi|401639119|gb|EJS56859.1| hypothetical protein IC9_00663 [Bacillus cereus BAG1O-2]
gi|402419565|gb|EJV51844.1| hypothetical protein IEA_00752 [Bacillus cereus BAG4X2-1]
gi|402421686|gb|EJV53934.1| hypothetical protein IEK_00672 [Bacillus cereus BAG6O-1]
gi|402464560|gb|EJV96250.1| hypothetical protein IGI_00670 [Bacillus cereus HuB2-9]
gi|407385046|gb|AFU15547.1| DNA-binding response regulator [Bacillus thuringiensis MC28]
Length = 231
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VV T++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVV--------TENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|229169580|ref|ZP_04297283.1| DNA-binding response regulator [Bacillus cereus AH621]
gi|423456899|ref|ZP_17433696.1| hypothetical protein IEI_00039 [Bacillus cereus BAG5X2-1]
gi|423591173|ref|ZP_17567204.1| hypothetical protein IIG_00041 [Bacillus cereus VD048]
gi|228613855|gb|EEK70977.1| DNA-binding response regulator [Bacillus cereus AH621]
gi|401149339|gb|EJQ56813.1| hypothetical protein IEI_00039 [Bacillus cereus BAG5X2-1]
gi|401233320|gb|EJR39813.1| hypothetical protein IIG_00041 [Bacillus cereus VD048]
Length = 231
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VV T++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVV--------TENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|229072342|ref|ZP_04205546.1| DNA-binding response regulator [Bacillus cereus F65185]
gi|228710767|gb|EEL62738.1| DNA-binding response regulator [Bacillus cereus F65185]
Length = 231
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|163942574|ref|YP_001647458.1| two component transcriptional regulator [Bacillus
weihenstephanensis KBAB4]
gi|229135685|ref|ZP_04264462.1| DNA-binding response regulator [Bacillus cereus BDRD-ST196]
gi|423451846|ref|ZP_17428699.1| hypothetical protein IEE_00590 [Bacillus cereus BAG5X1-1]
gi|423471044|ref|ZP_17447788.1| hypothetical protein IEM_02350 [Bacillus cereus BAG6O-2]
gi|423490015|ref|ZP_17466697.1| hypothetical protein IEU_04638 [Bacillus cereus BtB2-4]
gi|423495739|ref|ZP_17472383.1| hypothetical protein IEW_04637 [Bacillus cereus CER057]
gi|423497467|ref|ZP_17474084.1| hypothetical protein IEY_00694 [Bacillus cereus CER074]
gi|423519540|ref|ZP_17496021.1| hypothetical protein IG7_04610 [Bacillus cereus HuA2-4]
gi|423557573|ref|ZP_17533875.1| hypothetical protein II3_02777 [Bacillus cereus MC67]
gi|163864771|gb|ABY45830.1| two component transcriptional regulator, winged helix family
[Bacillus weihenstephanensis KBAB4]
gi|228647783|gb|EEL03841.1| DNA-binding response regulator [Bacillus cereus BDRD-ST196]
gi|401142652|gb|EJQ50192.1| hypothetical protein IEE_00590 [Bacillus cereus BAG5X1-1]
gi|401150068|gb|EJQ57533.1| hypothetical protein IEW_04637 [Bacillus cereus CER057]
gi|401158559|gb|EJQ65950.1| hypothetical protein IG7_04610 [Bacillus cereus HuA2-4]
gi|401162398|gb|EJQ69754.1| hypothetical protein IEY_00694 [Bacillus cereus CER074]
gi|401192817|gb|EJQ99826.1| hypothetical protein II3_02777 [Bacillus cereus MC67]
gi|402430334|gb|EJV62412.1| hypothetical protein IEU_04638 [Bacillus cereus BtB2-4]
gi|402433505|gb|EJV65556.1| hypothetical protein IEM_02350 [Bacillus cereus BAG6O-2]
Length = 231
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|30022904|ref|NP_834535.1| two-component response regulator [Bacillus cereus ATCC 14579]
gi|206969682|ref|ZP_03230636.1| DNA-binding response regulator [Bacillus cereus AH1134]
gi|218231548|ref|YP_002369645.1| DNA-binding response regulator [Bacillus cereus B4264]
gi|218900007|ref|YP_002448418.1| DNA-binding response regulator [Bacillus cereus G9842]
gi|228903354|ref|ZP_04067485.1| DNA-binding response regulator [Bacillus thuringiensis IBL 4222]
gi|228910691|ref|ZP_04074502.1| DNA-binding response regulator [Bacillus thuringiensis IBL 200]
gi|228923592|ref|ZP_04086872.1| DNA-binding response regulator [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228942018|ref|ZP_04104561.1| DNA-binding response regulator [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955112|ref|ZP_04117127.1| DNA-binding response regulator [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961108|ref|ZP_04122734.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228967956|ref|ZP_04128966.1| DNA-binding response regulator [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228974949|ref|ZP_04135510.1| DNA-binding response regulator [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981542|ref|ZP_04141839.1| DNA-binding response regulator [Bacillus thuringiensis Bt407]
gi|229048543|ref|ZP_04194104.1| DNA-binding response regulator [Bacillus cereus AH676]
gi|229112300|ref|ZP_04241839.1| DNA-binding response regulator [Bacillus cereus Rock1-15]
gi|229130118|ref|ZP_04259079.1| DNA-binding response regulator [Bacillus cereus BDRD-Cer4]
gi|229147408|ref|ZP_04275757.1| DNA-binding response regulator [Bacillus cereus BDRD-ST24]
gi|229153043|ref|ZP_04281224.1| DNA-binding response regulator [Bacillus cereus m1550]
gi|229181156|ref|ZP_04308488.1| DNA-binding response regulator [Bacillus cereus 172560W]
gi|229193119|ref|ZP_04320074.1| DNA-binding response regulator [Bacillus cereus ATCC 10876]
gi|296505302|ref|YP_003667002.1| two-component response regulator [Bacillus thuringiensis BMB171]
gi|365158377|ref|ZP_09354573.1| hypothetical protein HMPREF1014_00036 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188911|ref|YP_005574807.1| two-component response regulator [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402563642|ref|YP_006606366.1| two-component response regulator [Bacillus thuringiensis HD-771]
gi|410677238|ref|YP_006929609.1| transcriptional regulatory protein YxdJ [Bacillus thuringiensis
Bt407]
gi|423358059|ref|ZP_17335562.1| hypothetical protein IC1_00039 [Bacillus cereus VD022]
gi|423386364|ref|ZP_17363620.1| hypothetical protein ICE_04110 [Bacillus cereus BAG1X1-2]
gi|423394899|ref|ZP_17372100.1| hypothetical protein ICU_00593 [Bacillus cereus BAG2X1-1]
gi|423405759|ref|ZP_17382908.1| hypothetical protein ICY_00444 [Bacillus cereus BAG2X1-3]
gi|423411372|ref|ZP_17388492.1| hypothetical protein IE1_00676 [Bacillus cereus BAG3O-2]
gi|423426971|ref|ZP_17404002.1| hypothetical protein IE5_04660 [Bacillus cereus BAG3X2-2]
gi|423432842|ref|ZP_17409846.1| hypothetical protein IE7_04658 [Bacillus cereus BAG4O-1]
gi|423438273|ref|ZP_17415254.1| hypothetical protein IE9_04454 [Bacillus cereus BAG4X12-1]
gi|423502478|ref|ZP_17479070.1| hypothetical protein IG1_00044 [Bacillus cereus HD73]
gi|423527306|ref|ZP_17503751.1| hypothetical protein IGE_00858 [Bacillus cereus HuB1-1]
gi|423560635|ref|ZP_17536911.1| hypothetical protein II5_00039 [Bacillus cereus MSX-A1]
gi|423584636|ref|ZP_17560723.1| hypothetical protein IIE_00048 [Bacillus cereus VD045]
gi|423631568|ref|ZP_17607315.1| hypothetical protein IK5_04418 [Bacillus cereus VD154]
gi|423634273|ref|ZP_17609926.1| hypothetical protein IK7_00682 [Bacillus cereus VD156]
gi|423640097|ref|ZP_17615715.1| hypothetical protein IK9_00042 [Bacillus cereus VD166]
gi|423650730|ref|ZP_17626300.1| hypothetical protein IKA_04517 [Bacillus cereus VD169]
gi|423657789|ref|ZP_17633088.1| hypothetical protein IKG_04777 [Bacillus cereus VD200]
gi|434378004|ref|YP_006612648.1| two-component response regulator [Bacillus thuringiensis HD-789]
gi|449091802|ref|YP_007424243.1| two-component response regulator [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452201318|ref|YP_007481399.1| Two-component response regulator YvcP [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|29898463|gb|AAP11736.1| Two-component response regulator [Bacillus cereus ATCC 14579]
gi|206735370|gb|EDZ52538.1| DNA-binding response regulator [Bacillus cereus AH1134]
gi|218159505|gb|ACK59497.1| DNA-binding response regulator [Bacillus cereus B4264]
gi|218545331|gb|ACK97725.1| DNA-binding response regulator [Bacillus cereus G9842]
gi|228590383|gb|EEK48247.1| DNA-binding response regulator [Bacillus cereus ATCC 10876]
gi|228602347|gb|EEK59836.1| DNA-binding response regulator [Bacillus cereus 172560W]
gi|228630463|gb|EEK87111.1| DNA-binding response regulator [Bacillus cereus m1550]
gi|228636090|gb|EEK92571.1| DNA-binding response regulator [Bacillus cereus BDRD-ST24]
gi|228653333|gb|EEL09210.1| DNA-binding response regulator [Bacillus cereus BDRD-Cer4]
gi|228671140|gb|EEL26445.1| DNA-binding response regulator [Bacillus cereus Rock1-15]
gi|228722807|gb|EEL74191.1| DNA-binding response regulator [Bacillus cereus AH676]
gi|228778221|gb|EEM26491.1| DNA-binding response regulator [Bacillus thuringiensis Bt407]
gi|228784802|gb|EEM32820.1| DNA-binding response regulator [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791737|gb|EEM39329.1| DNA-binding response regulator [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228798551|gb|EEM45538.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804622|gb|EEM51226.1| DNA-binding response regulator [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817687|gb|EEM63769.1| DNA-binding response regulator [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228836061|gb|EEM81422.1| DNA-binding response regulator [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848959|gb|EEM93802.1| DNA-binding response regulator [Bacillus thuringiensis IBL 200]
gi|228856315|gb|EEN00844.1| DNA-binding response regulator [Bacillus thuringiensis IBL 4222]
gi|296326354|gb|ADH09282.1| two-component response regulator [Bacillus thuringiensis BMB171]
gi|326942620|gb|AEA18516.1| two-component response regulator [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363626912|gb|EHL77875.1| hypothetical protein HMPREF1014_00036 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401086552|gb|EJP94774.1| hypothetical protein IC1_00039 [Bacillus cereus VD022]
gi|401107427|gb|EJQ15374.1| hypothetical protein IE1_00676 [Bacillus cereus BAG3O-2]
gi|401109886|gb|EJQ17804.1| hypothetical protein IE5_04660 [Bacillus cereus BAG3X2-2]
gi|401114298|gb|EJQ22160.1| hypothetical protein IE7_04658 [Bacillus cereus BAG4O-1]
gi|401118653|gb|EJQ26483.1| hypothetical protein IE9_04454 [Bacillus cereus BAG4X12-1]
gi|401203172|gb|EJR10012.1| hypothetical protein II5_00039 [Bacillus cereus MSX-A1]
gi|401235862|gb|EJR42329.1| hypothetical protein IIE_00048 [Bacillus cereus VD045]
gi|401263705|gb|EJR69827.1| hypothetical protein IK5_04418 [Bacillus cereus VD154]
gi|401281059|gb|EJR86973.1| hypothetical protein IK7_00682 [Bacillus cereus VD156]
gi|401281401|gb|EJR87313.1| hypothetical protein IKA_04517 [Bacillus cereus VD169]
gi|401282121|gb|EJR88025.1| hypothetical protein IK9_00042 [Bacillus cereus VD166]
gi|401288800|gb|EJR94539.1| hypothetical protein IKG_04777 [Bacillus cereus VD200]
gi|401633319|gb|EJS51100.1| hypothetical protein ICE_04110 [Bacillus cereus BAG1X1-2]
gi|401656033|gb|EJS73557.1| hypothetical protein ICU_00593 [Bacillus cereus BAG2X1-1]
gi|401660806|gb|EJS78280.1| hypothetical protein ICY_00444 [Bacillus cereus BAG2X1-3]
gi|401792294|gb|AFQ18333.1| two-component response regulator [Bacillus thuringiensis HD-771]
gi|401876561|gb|AFQ28728.1| two-component response regulator [Bacillus thuringiensis HD-789]
gi|402453359|gb|EJV85160.1| hypothetical protein IGE_00858 [Bacillus cereus HuB1-1]
gi|402460319|gb|EJV92041.1| hypothetical protein IG1_00044 [Bacillus cereus HD73]
gi|409176367|gb|AFV20672.1| transcriptional regulatory protein YxdJ [Bacillus thuringiensis
Bt407]
gi|449025559|gb|AGE80722.1| two-component response regulator [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106711|gb|AGG03651.1| Two-component response regulator YvcP [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 231
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|229175552|ref|ZP_04303062.1| DNA-binding response regulator [Bacillus cereus MM3]
gi|228607948|gb|EEK65260.1| DNA-binding response regulator [Bacillus cereus MM3]
Length = 231
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|118479956|ref|YP_897107.1| DNA-binding response regulator [Bacillus thuringiensis str. Al
Hakam]
gi|118419181|gb|ABK87600.1| DNA-binding response regulator [Bacillus thuringiensis str. Al
Hakam]
Length = 249
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 38 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 88
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 89 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 136
>gi|423613021|ref|ZP_17588882.1| hypothetical protein IIM_03736 [Bacillus cereus VD107]
gi|401243492|gb|EJR49862.1| hypothetical protein IIM_03736 [Bacillus cereus VD107]
Length = 231
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|75759288|ref|ZP_00739387.1| Two-component response regulator [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493237|gb|EAO56354.1| Two-component response regulator [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 240
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 29 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 79
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 80 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 127
>gi|398818988|ref|ZP_10577562.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. BC25]
gi|398026556|gb|EJL20153.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. BC25]
Length = 232
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYP-----FIEIFHSP-EQAS 116
+H DRV+E + P + + V PK+ GF RQ ++ FI S +Q
Sbjct: 31 VEHFDRVME-VFTQSRPDLVLLDVNLPKFDGFYWCRQMRQESNCPILFISARESKMDQVM 89
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E GAD ITK PF+YD+ R +R
Sbjct: 90 ALENGADDYITK------PFDYDVVLAKIRSQLRR 118
>gi|30264900|ref|NP_847277.1| DNA-binding response regulator [Bacillus anthracis str. Ames]
gi|47530386|ref|YP_021735.1| DNA-binding response regulator [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187716|ref|YP_030969.1| DNA-binding response regulator [Bacillus anthracis str. Sterne]
gi|49481771|ref|YP_038879.1| DNA-binding response regulator [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65322198|ref|ZP_00395157.1| COG0745: Response regulators consisting of a CheY-like receiver
domain and a winged-helix DNA-binding domain [Bacillus
anthracis str. A2012]
gi|165869737|ref|ZP_02214395.1| DNA-binding response regulator [Bacillus anthracis str. A0488]
gi|167634030|ref|ZP_02392353.1| DNA-binding response regulator [Bacillus anthracis str. A0442]
gi|167638007|ref|ZP_02396285.1| DNA-binding response regulator [Bacillus anthracis str. A0193]
gi|170685909|ref|ZP_02877132.1| DNA-binding response regulator [Bacillus anthracis str. A0465]
gi|170705536|ref|ZP_02896000.1| DNA-binding response regulator [Bacillus anthracis str. A0389]
gi|177651274|ref|ZP_02934105.1| DNA-binding response regulator [Bacillus anthracis str. A0174]
gi|196033172|ref|ZP_03100585.1| DNA-binding response regulator [Bacillus cereus W]
gi|196041444|ref|ZP_03108737.1| DNA-binding response regulator [Bacillus cereus NVH0597-99]
gi|196043886|ref|ZP_03111123.1| DNA-binding response regulator [Bacillus cereus 03BB108]
gi|206977011|ref|ZP_03237912.1| DNA-binding response regulator [Bacillus cereus H3081.97]
gi|217962325|ref|YP_002340897.1| DNA-binding response regulator [Bacillus cereus AH187]
gi|218906060|ref|YP_002453894.1| DNA-binding response regulator [Bacillus cereus AH820]
gi|222098310|ref|YP_002532367.1| DNA-binding response regulator [Bacillus cereus Q1]
gi|225866835|ref|YP_002752213.1| DNA-binding response regulator [Bacillus cereus 03BB102]
gi|227817627|ref|YP_002817636.1| DNA-binding response regulator [Bacillus anthracis str. CDC 684]
gi|228917487|ref|ZP_04081036.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929881|ref|ZP_04092896.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936145|ref|ZP_04098948.1| DNA-binding response regulator [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948581|ref|ZP_04110860.1| DNA-binding response regulator [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228988098|ref|ZP_04148197.1| DNA-binding response regulator [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229093945|ref|ZP_04225036.1| DNA-binding response regulator [Bacillus cereus Rock3-42]
gi|229124398|ref|ZP_04253586.1| DNA-binding response regulator [Bacillus cereus 95/8201]
gi|229141576|ref|ZP_04270108.1| DNA-binding response regulator [Bacillus cereus BDRD-ST26]
gi|229158457|ref|ZP_04286518.1| DNA-binding response regulator [Bacillus cereus ATCC 4342]
gi|229187098|ref|ZP_04314247.1| DNA-binding response regulator [Bacillus cereus BGSC 6E1]
gi|229199005|ref|ZP_04325691.1| DNA-binding response regulator [Bacillus cereus m1293]
gi|229604112|ref|YP_002869105.1| DNA-binding response regulator [Bacillus anthracis str. A0248]
gi|254687640|ref|ZP_05151496.1| DNA-binding response regulator [Bacillus anthracis str. CNEVA-9066]
gi|254725206|ref|ZP_05186989.1| DNA-binding response regulator [Bacillus anthracis str. A1055]
gi|254736944|ref|ZP_05194650.1| DNA-binding response regulator [Bacillus anthracis str. Western
North America USA6153]
gi|254741979|ref|ZP_05199666.1| DNA-binding response regulator [Bacillus anthracis str. Kruger B]
gi|254754423|ref|ZP_05206458.1| DNA-binding response regulator [Bacillus anthracis str. Vollum]
gi|254757256|ref|ZP_05209283.1| DNA-binding response regulator [Bacillus anthracis str. Australia
94]
gi|375286847|ref|YP_005107286.1| DNA-binding response regulator [Bacillus cereus NC7401]
gi|376268769|ref|YP_005121481.1| Two-component response regulator YvcP like protein [Bacillus cereus
F837/76]
gi|384182654|ref|YP_005568416.1| DNA-binding response regulator [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|386738730|ref|YP_006211911.1| DNA-binding response regulator [Bacillus anthracis str. H9401]
gi|421508694|ref|ZP_15955606.1| DNA-binding response regulator [Bacillus anthracis str. UR-1]
gi|421639921|ref|ZP_16080510.1| DNA-binding response regulator [Bacillus anthracis str. BF1]
gi|423355323|ref|ZP_17332948.1| hypothetical protein IAU_03397 [Bacillus cereus IS075]
gi|423373208|ref|ZP_17350547.1| hypothetical protein IC5_02263 [Bacillus cereus AND1407]
gi|423571064|ref|ZP_17547309.1| hypothetical protein II7_04285 [Bacillus cereus MSX-A12]
gi|423573464|ref|ZP_17549583.1| hypothetical protein II9_00685 [Bacillus cereus MSX-D12]
gi|423603476|ref|ZP_17579369.1| hypothetical protein IIK_00057 [Bacillus cereus VD102]
gi|30259575|gb|AAP28763.1| DNA-binding response regulator [Bacillus anthracis str. Ames]
gi|47505534|gb|AAT34210.1| DNA-binding response regulator [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181643|gb|AAT57019.1| DNA-binding response regulator [Bacillus anthracis str. Sterne]
gi|49333327|gb|AAT63973.1| DNA-binding response regulator [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714566|gb|EDR20085.1| DNA-binding response regulator [Bacillus anthracis str. A0488]
gi|167513824|gb|EDR89192.1| DNA-binding response regulator [Bacillus anthracis str. A0193]
gi|167530831|gb|EDR93533.1| DNA-binding response regulator [Bacillus anthracis str. A0442]
gi|170129661|gb|EDS98524.1| DNA-binding response regulator [Bacillus anthracis str. A0389]
gi|170670373|gb|EDT21113.1| DNA-binding response regulator [Bacillus anthracis str. A0465]
gi|172083100|gb|EDT68162.1| DNA-binding response regulator [Bacillus anthracis str. A0174]
gi|195994601|gb|EDX58556.1| DNA-binding response regulator [Bacillus cereus W]
gi|196025222|gb|EDX63892.1| DNA-binding response regulator [Bacillus cereus 03BB108]
gi|196027692|gb|EDX66306.1| DNA-binding response regulator [Bacillus cereus NVH0597-99]
gi|206744816|gb|EDZ56222.1| DNA-binding response regulator [Bacillus cereus H3081.97]
gi|217063173|gb|ACJ77423.1| DNA-binding response regulator [Bacillus cereus AH187]
gi|218534774|gb|ACK87172.1| DNA-binding response regulator [Bacillus cereus AH820]
gi|221242368|gb|ACM15078.1| DNA-binding response regulator [Bacillus cereus Q1]
gi|225788218|gb|ACO28435.1| DNA-binding response regulator [Bacillus cereus 03BB102]
gi|227007195|gb|ACP16938.1| DNA-binding response regulator [Bacillus anthracis str. CDC 684]
gi|228584471|gb|EEK42603.1| DNA-binding response regulator [Bacillus cereus m1293]
gi|228596407|gb|EEK54078.1| DNA-binding response regulator [Bacillus cereus BGSC 6E1]
gi|228624976|gb|EEK81742.1| DNA-binding response regulator [Bacillus cereus ATCC 4342]
gi|228641856|gb|EEK98155.1| DNA-binding response regulator [Bacillus cereus BDRD-ST26]
gi|228659050|gb|EEL14702.1| DNA-binding response regulator [Bacillus cereus 95/8201]
gi|228689427|gb|EEL43241.1| DNA-binding response regulator [Bacillus cereus Rock3-42]
gi|228771596|gb|EEM20063.1| DNA-binding response regulator [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228811080|gb|EEM57422.1| DNA-binding response regulator [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823490|gb|EEM69319.1| DNA-binding response regulator [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829797|gb|EEM75419.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842159|gb|EEM87258.1| DNA-binding response regulator [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268520|gb|ACQ50157.1| DNA-binding response regulator [Bacillus anthracis str. A0248]
gi|324328738|gb|ADY23998.1| DNA-binding response regulator [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358355374|dbj|BAL20546.1| DNA-binding response regulator [Bacillus cereus NC7401]
gi|364514569|gb|AEW57968.1| Two-component response regulator YvcP like protein [Bacillus cereus
F837/76]
gi|384388582|gb|AFH86243.1| DNA-binding response regulator [Bacillus anthracis str. H9401]
gi|401083945|gb|EJP92196.1| hypothetical protein IAU_03397 [Bacillus cereus IS075]
gi|401096912|gb|EJQ04948.1| hypothetical protein IC5_02263 [Bacillus cereus AND1407]
gi|401202521|gb|EJR09374.1| hypothetical protein II7_04285 [Bacillus cereus MSX-A12]
gi|401215011|gb|EJR21732.1| hypothetical protein II9_00685 [Bacillus cereus MSX-D12]
gi|401247455|gb|EJR53791.1| hypothetical protein IIK_00057 [Bacillus cereus VD102]
gi|401821317|gb|EJT20475.1| DNA-binding response regulator [Bacillus anthracis str. UR-1]
gi|403393009|gb|EJY90256.1| DNA-binding response regulator [Bacillus anthracis str. BF1]
Length = 231
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|423368860|ref|ZP_17346292.1| hypothetical protein IC3_03961 [Bacillus cereus VD142]
gi|423512950|ref|ZP_17489481.1| hypothetical protein IG3_04447 [Bacillus cereus HuA2-1]
gi|401079117|gb|EJP87419.1| hypothetical protein IC3_03961 [Bacillus cereus VD142]
gi|402447243|gb|EJV79100.1| hypothetical protein IG3_04447 [Bacillus cereus HuA2-1]
Length = 231
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|261404786|ref|YP_003241027.1| winged helix family two component transcriptional regulator
[Paenibacillus sp. Y412MC10]
gi|261281249|gb|ACX63220.1| two component transcriptional regulator, winged helix family
[Paenibacillus sp. Y412MC10]
Length = 230
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 60 GNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFH---SPE 113
GN+ + D VLE+ + PH+ + V P + G+ RQ + P I I +P+
Sbjct: 28 GNIVEDFDHVLEQFH-KMKPHLVLLDVNLPSFDGYYWCRQIRSVSTCPIIFISARNGTPD 86
Query: 114 QASTRERGADPNITKYAVKVLPFNYDL 140
Q E GAD ITK PF YD+
Sbjct: 87 QLRALENGADDYITK------PFAYDI 107
>gi|229014045|ref|ZP_04171169.1| DNA-binding response regulator [Bacillus mycoides DSM 2048]
gi|229062531|ref|ZP_04199844.1| DNA-binding response regulator [Bacillus cereus AH603]
gi|423417222|ref|ZP_17394311.1| hypothetical protein IE3_00694 [Bacillus cereus BAG3X2-1]
gi|423521268|ref|ZP_17497741.1| hypothetical protein IGC_00651 [Bacillus cereus HuA4-10]
gi|423597857|ref|ZP_17573857.1| hypothetical protein III_00659 [Bacillus cereus VD078]
gi|423660302|ref|ZP_17635471.1| hypothetical protein IKM_00699 [Bacillus cereus VDM022]
gi|423670420|ref|ZP_17645449.1| hypothetical protein IKO_04117 [Bacillus cereus VDM034]
gi|423673375|ref|ZP_17648314.1| hypothetical protein IKS_00918 [Bacillus cereus VDM062]
gi|228716814|gb|EEL68505.1| DNA-binding response regulator [Bacillus cereus AH603]
gi|228747301|gb|EEL97180.1| DNA-binding response regulator [Bacillus mycoides DSM 2048]
gi|401108640|gb|EJQ16571.1| hypothetical protein IE3_00694 [Bacillus cereus BAG3X2-1]
gi|401178627|gb|EJQ85801.1| hypothetical protein IGC_00651 [Bacillus cereus HuA4-10]
gi|401238059|gb|EJR44501.1| hypothetical protein III_00659 [Bacillus cereus VD078]
gi|401296514|gb|EJS02132.1| hypothetical protein IKO_04117 [Bacillus cereus VDM034]
gi|401302972|gb|EJS08539.1| hypothetical protein IKM_00699 [Bacillus cereus VDM022]
gi|401310735|gb|EJS16047.1| hypothetical protein IKS_00918 [Bacillus cereus VDM062]
Length = 231
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|226310130|ref|YP_002770024.1| two-component response regulator [Brevibacillus brevis NBRC 100599]
gi|226093078|dbj|BAH41520.1| two-component response regulator [Brevibacillus brevis NBRC 100599]
Length = 232
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYP-----FIEIFHSP-EQAS 116
+H DRV+E + P + + V PK+ GF RQ ++ FI S +Q
Sbjct: 31 VEHFDRVME-VFTQSRPDLVLLDVNLPKFDGFYWCRQMRQESNCPILFISARESKMDQVM 89
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E GAD ITK PF+YD+ R +R
Sbjct: 90 ALENGADDYITK------PFDYDVVLAKIRSQLRR 118
>gi|423400288|ref|ZP_17377461.1| hypothetical protein ICW_00686 [Bacillus cereus BAG2X1-2]
gi|401655645|gb|EJS73174.1| hypothetical protein ICW_00686 [Bacillus cereus BAG2X1-2]
Length = 231
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|229020091|ref|ZP_04176872.1| DNA-binding response regulator [Bacillus cereus AH1273]
gi|229026320|ref|ZP_04182679.1| DNA-binding response regulator [Bacillus cereus AH1272]
gi|229032496|ref|ZP_04188464.1| DNA-binding response regulator [Bacillus cereus AH1271]
gi|423388844|ref|ZP_17366070.1| hypothetical protein ICG_00692 [Bacillus cereus BAG1X1-3]
gi|423479009|ref|ZP_17455724.1| hypothetical protein IEO_04467 [Bacillus cereus BAG6X1-1]
gi|228728865|gb|EEL79873.1| DNA-binding response regulator [Bacillus cereus AH1271]
gi|228735036|gb|EEL85672.1| DNA-binding response regulator [Bacillus cereus AH1272]
gi|228741201|gb|EEL91418.1| DNA-binding response regulator [Bacillus cereus AH1273]
gi|401642919|gb|EJS60625.1| hypothetical protein ICG_00692 [Bacillus cereus BAG1X1-3]
gi|402426319|gb|EJV58447.1| hypothetical protein IEO_04467 [Bacillus cereus BAG6X1-1]
Length = 231
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|399056315|ref|ZP_10743698.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. CF112]
gi|433546283|ref|ZP_20502613.1| two-component response regulator [Brevibacillus agri BAB-2500]
gi|398046209|gb|EJL38838.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. CF112]
gi|432182424|gb|ELK39995.1| two-component response regulator [Brevibacillus agri BAB-2500]
Length = 232
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYP-----FIEIFHSP-EQAS 116
+H DRV+E ++ P + + V PK+ GF RQ ++ FI S +Q
Sbjct: 31 VEHFDRVMEVFVSK-RPDLVLLDVNLPKFDGFYWCRQMRQESNCPILFISARESKMDQVM 89
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E GAD ITK PF+YD+ R +R
Sbjct: 90 ALENGADDYITK------PFDYDVVLAKIRSQLRR 118
>gi|190567143|ref|ZP_03020058.1| DNA-binding response regulator [Bacillus anthracis str.
Tsiankovskii-I]
gi|190561647|gb|EDV15617.1| DNA-binding response regulator [Bacillus anthracis str.
Tsiankovskii-I]
Length = 232
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|315645222|ref|ZP_07898347.1| two component transcriptional regulator, winged helix family
protein [Paenibacillus vortex V453]
gi|315279264|gb|EFU42570.1| two component transcriptional regulator, winged helix family
protein [Paenibacillus vortex V453]
Length = 232
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 62 LTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFH---SPEQA 115
+ + D+VLE+ E PHV + V P + G+ RQ + P I I +P+Q
Sbjct: 30 IVEDFDQVLEQFQ-ELKPHVVLLDVNLPSFDGYYWCRQIRSLSTCPIIFISARSGTPDQL 88
Query: 116 STRERGADPNITKYAVKVLPFNYDL 140
E GAD ITK PF YD+
Sbjct: 89 RALENGADDYITK------PFAYDI 107
>gi|229163835|ref|ZP_04291778.1| DNA-binding response regulator [Bacillus cereus R309803]
gi|228619655|gb|EEK76538.1| DNA-binding response regulator [Bacillus cereus R309803]
Length = 231
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY +VA ++ D ++E A PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAIVA--------ENFDDIMESFNA-VKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|168047299|ref|XP_001776108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672483|gb|EDQ59019.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 107
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 36 FTSEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGF 94
T E EF +L G PV++ + +L LE+ AAE++P++KF V+ P
Sbjct: 10 ITGEAEFNEVLESGNPVIIDWMAAWCRKCIYLKPKLEKLAAEYHPNIKFYFVDVNTVPSA 69
Query: 95 CLTRQR-KEYPFIEIFHSPEQAS 116
+ R + P I+++ + E+A
Sbjct: 70 LVARAAVTKMPTIQLWKNKEKAG 92
>gi|308506034|ref|XP_003115200.1| CRE-DNJ-27 protein [Caenorhabditis remanei]
gi|308259382|gb|EFP03335.1| CRE-DNJ-27 protein [Caenorhabditis remanei]
Length = 788
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 69 VLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGADPNITK 128
V ++ A E V F +V+C ++PG C Q + YP I +++ S +
Sbjct: 707 VYDQIAKELEGKVNFAKVDCDQWPGVCQGAQVRAYPTIRLYYGKSGWSRQ---------- 756
Query: 129 YAVKVLPFNYDLSAYGFREYFKRQGIRHLQKYLKTN 164
D+ YG K Q I+ +++ LK N
Sbjct: 757 ----------DVMGYGIGTQHKEQFIQIVKQQLKLN 782
>gi|169826021|ref|YP_001696179.1| hypothetical protein Bsph_0422 [Lysinibacillus sphaericus C3-41]
gi|168990509|gb|ACA38049.1| YxdJ [Lysinibacillus sphaericus C3-41]
Length = 234
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 64 KHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAST 117
+ D ++EE A F PH+ + + P Y G+ RQ +++ P I I +Q
Sbjct: 34 QEFDHLIEEFTA-FNPHMVLLDINLPSYDGYYWCRQLRQHTTCPIIFISARSGEMDQIFA 92
Query: 118 RERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PFNY++ R + +R
Sbjct: 93 LENGGDDFITK------PFNYEIVLAKIRSHLRR 120
>gi|299537386|ref|ZP_07050684.1| YxdJ [Lysinibacillus fusiformis ZC1]
gi|424738550|ref|ZP_18166988.1| YxdJ [Lysinibacillus fusiformis ZB2]
gi|298727178|gb|EFI67755.1| YxdJ [Lysinibacillus fusiformis ZC1]
gi|422947755|gb|EKU42147.1| YxdJ [Lysinibacillus fusiformis ZB2]
Length = 234
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 64 KHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAST 117
+ D ++EE A F PH+ + + P Y G+ RQ +++ P I I +Q
Sbjct: 34 QEFDHLIEEFTA-FNPHMVLLDINLPAYDGYYWCRQLRQHTTCPIIFISARSGEMDQIFA 92
Query: 118 RERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PFNY++ R + +R
Sbjct: 93 LENGGDDFITK------PFNYEIVLAKIRSHLRR 120
>gi|126649404|ref|ZP_01721645.1| YxdJ [Bacillus sp. B14905]
gi|126593729|gb|EAZ87652.1| YxdJ [Bacillus sp. B14905]
Length = 234
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 64 KHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAST 117
+ D ++EE A F PH+ + + P Y G+ RQ +++ P I I +Q
Sbjct: 34 QEFDHLIEEFTA-FNPHMVLLDINLPSYDGYYWCRQLRQHTTCPIIFISARSGEMDQIFA 92
Query: 118 RERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PFNY++ R + +R
Sbjct: 93 LENGGDDFITK------PFNYEIVLAKIRSHLRR 120
>gi|42784035|ref|NP_981282.1| DNA-binding response regulator [Bacillus cereus ATCC 10987]
gi|402555030|ref|YP_006596301.1| DNA-binding response regulator [Bacillus cereus FRI-35]
gi|42739965|gb|AAS43890.1| DNA-binding response regulator [Bacillus cereus ATCC 10987]
gi|401796240|gb|AFQ10099.1| DNA-binding response regulator [Bacillus cereus FRI-35]
Length = 231
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VV T++ D ++E + PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYDAVV--------TENFDDIME-SFNTVKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|52140668|ref|YP_086162.1| DNA-binding response regulator [Bacillus cereus E33L]
gi|51974137|gb|AAU15687.1| DNA-binding response regulator [Bacillus cereus E33L]
Length = 231
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 44 HILHQGYPVVVAFTIRGNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQ-RKE 102
HI GY VVA ++ D ++E + PH+ + V PK+ GF RQ R E
Sbjct: 20 HIQKYGYEAVVA--------ENFDDIME-SFNTVKPHLVLLDVNLPKFDGFYWCRQIRHE 70
Query: 103 YPFIEIFHSP-----EQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
IF S EQ E GAD ITK PF+YD+ + +R
Sbjct: 71 STCPIIFISARAGEMEQIMAIESGADDYITK------PFHYDVVMAKIKGQLRR 118
>gi|239826047|ref|YP_002948671.1| winged helix family two component transcriptional regulator
[Geobacillus sp. WCH70]
gi|239806340|gb|ACS23405.1| two component transcriptional regulator, winged helix family
[Geobacillus sp. WCH70]
Length = 232
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 52 VVVAFTIRGNLTK-----HLDRVLEEAAAEF---YPHVKFMRVECPKYPGFCLTRQRKEY 103
V +AF ++ ++ K H+ ++ EF +PH+ + + P++ GF RQ +
Sbjct: 11 VKIAFMLKEHIEKYEYRAHIAEQFDDIKKEFIKYHPHLVLLDINLPRFDGFYWCRQIRTI 70
Query: 104 PFIEIF------HSPEQASTRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
I H Q E G D ITK PFN DL + +R
Sbjct: 71 SLCPIIFISARSHEMNQIMAIENGGDDYITK------PFNLDLVMAKIKSLLRR 118
>gi|403385559|ref|ZP_10927616.1| hypothetical protein KJC30_12707 [Kurthia sp. JC30]
Length = 234
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFH------SPEQAS 116
+H D+++E A F PH+ + + P Y GF RQ +++ + I + +Q
Sbjct: 33 VEHFDQIIETFKA-FDPHLVLLDINLPSYDGFYWCRQLRQFTTVPIIYISARSGEMDQIF 91
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D I K PF+Y++ + +R
Sbjct: 92 ALENGGDDFIMK------PFHYEIVLAKIKSQLRR 120
>gi|195566261|ref|XP_002106705.1| GD17042 [Drosophila simulans]
gi|194204091|gb|EDX17667.1| GD17042 [Drosophila simulans]
Length = 416
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 79 PHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD--PNITKYAVKVL-- 134
P V +V+C K+ G C T Q YP + +F E+ S + +G P IT + K L
Sbjct: 87 PKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 146
Query: 135 PFNYDLSAYGFREYFKRQGIRHL 157
P DL + KR+ + +L
Sbjct: 147 PAEADL------DEVKREQVENL 163
>gi|393199447|ref|YP_006461289.1| response regulator consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Solibacillus silvestris
StLB046]
gi|406666697|ref|ZP_11074462.1| Glycopeptide resistance-associated protein R [Bacillus isronensis
B3W22]
gi|327438778|dbj|BAK15143.1| response regulator consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Solibacillus silvestris
StLB046]
gi|405385467|gb|EKB44901.1| Glycopeptide resistance-associated protein R [Bacillus isronensis
B3W22]
Length = 234
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 64 KHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAST 117
K D ++E+ A F PH+ + + P Y G+ R+ +++ P + I +Q
Sbjct: 34 KDFDSLMEQCLA-FSPHIILLDINLPSYDGYYWCRELRQFTKCPILFISARSGEMDQIFA 92
Query: 118 RERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PFNY++ R + +R
Sbjct: 93 LENGGDDFITK------PFNYEIVLAKIRSHLRR 120
>gi|18859803|ref|NP_572742.1| pretaporter, isoform A [Drosophila melanogaster]
gi|320541972|ref|NP_001188583.1| pretaporter, isoform B [Drosophila melanogaster]
gi|320541974|ref|NP_001188584.1| pretaporter, isoform C [Drosophila melanogaster]
gi|10728195|gb|AAF48082.2| pretaporter, isoform A [Drosophila melanogaster]
gi|15291729|gb|AAK93133.1| LD24756p [Drosophila melanogaster]
gi|220944870|gb|ACL84978.1| CG1837-PA [synthetic construct]
gi|220954714|gb|ACL89900.1| CG1837-PA [synthetic construct]
gi|318069367|gb|ADV37665.1| pretaporter, isoform B [Drosophila melanogaster]
gi|318069368|gb|ADV37666.1| pretaporter, isoform C [Drosophila melanogaster]
Length = 416
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 79 PHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD--PNITKYAVKVL-- 134
P V +V+C K+ G C T Q YP + +F E+ S + +G P IT + K L
Sbjct: 87 PKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 146
Query: 135 PFNYDLSAYGFREYFKRQGIRHL 157
P DL KR+ + +L
Sbjct: 147 PAEADLGE------VKREQVENL 163
>gi|195355266|ref|XP_002044113.1| GM13104 [Drosophila sechellia]
gi|194129382|gb|EDW51425.1| GM13104 [Drosophila sechellia]
Length = 416
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 79 PHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD--PNITKYAVKVL-- 134
P V +V+C K+ G C T Q YP + +F E+ S + +G P IT + K L
Sbjct: 87 PKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 146
Query: 135 PFNYDLSAYGFREYFKRQGIRHL 157
P DL + KR+ + +L
Sbjct: 147 PAEADL------DEVKREQVENL 163
>gi|354585659|ref|ZP_09004492.1| two component transcriptional regulator, winged helix family
[Paenibacillus lactis 154]
gi|353184672|gb|EHB50197.1| two component transcriptional regulator, winged helix family
[Paenibacillus lactis 154]
Length = 232
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 60 GNLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIF---HSPE 113
G + + D VLE E PH+ + V P Y G+ RQ + P I I +P+
Sbjct: 28 GIIIRECDHVLERFR-EIKPHLVLLDVNLPSYDGYFWCRQIRSMSTCPIIFISARNGTPD 86
Query: 114 QASTRERGADPNITKYAVKVLPFNYDL 140
Q E GAD ITK PF YD+
Sbjct: 87 QLRALENGADDYITK------PFAYDI 107
>gi|340355364|ref|ZP_08678051.1| sensory transduction protein YxdJ [Sporosarcina newyorkensis 2681]
gi|339622451|gb|EGQ26971.1| sensory transduction protein YxdJ [Sporosarcina newyorkensis 2681]
Length = 233
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 62 LTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIF------HSPEQA 115
+ + DRV+EE A + PH+ + + P Y G+ RQ +++ I +Q
Sbjct: 32 IIEDFDRVVEECVA-YNPHLVLLDINLPIYDGYYWCRQLRQHTMCPIIFISARSGDMDQV 90
Query: 116 STRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PF+Y++ + + +R
Sbjct: 91 FALENGGDDFITK------PFHYEIVLAKIKSHLRR 120
>gi|442616011|ref|NP_001259460.1| pretaporter, isoform D [Drosophila melanogaster]
gi|440216672|gb|AGB95303.1| pretaporter, isoform D [Drosophila melanogaster]
Length = 353
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 79 PHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD--PNITKYAVKVL-- 134
P V +V+C K+ G C T Q YP + +F E+ S + +G P IT + K L
Sbjct: 24 PKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 83
Query: 135 PFNYDLSAYGFREYFKRQGIRHL 157
P DL KR+ + +L
Sbjct: 84 PAEADLGE------VKREQVENL 100
>gi|388520161|gb|AFK48142.1| unknown [Lotus japonicus]
Length = 319
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 38 SEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCL 96
S+ E ++H G V + F +KH+D++ + +F PH F+RVE + P
Sbjct: 10 SKAELDEVVHGGAAVALHFWASWCEASKHMDKIFSHLSTDF-PHAHFLRVEAEEQPEISE 68
Query: 97 TRQRKEYPFIEIFHSPEQASTRERGADPN-----ITKYAVKVLP 135
PF + T E GADP+ + K A V P
Sbjct: 69 AYSVSAVPFFVFCKDGKTVDTLE-GADPSSLANKVAKVAGSVNP 111
>gi|119492296|ref|ZP_01623643.1| Thioredoxin [Lyngbya sp. PCC 8106]
gi|119453181|gb|EAW34348.1| Thioredoxin [Lyngbya sp. PCC 8106]
Length = 112
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 36 FTSEREFVHILHQGYPVVVAFTIRG-NLTKHLDRVLEEAAAEFYPHVKFMRVECPK 90
F E++F IL + VVV F I G NL+ + ++ + A E++P VK ++++ K
Sbjct: 12 FIQEKDFDRILEEHPLVVVVFVISGCNLSYRIRSIINKLADEYFPRVKVVKIDIEK 67
>gi|388581540|gb|EIM21848.1| thioredoxin-like protein [Wallemia sebi CBS 633.66]
Length = 598
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 64 KHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD 123
+HL V EE A F + V+C K+ C + K YP + ++ + + ++ +
Sbjct: 173 QHLAPVWEELAVRFKGKLTIASVDCDKHHALCQKEKVKSYPTLSLYSNTHKKVYKDGRSL 232
Query: 124 PNITKYAVKVL 134
++K+A KVL
Sbjct: 233 EKMSKFAKKVL 243
>gi|323489407|ref|ZP_08094636.1| YxdJ [Planococcus donghaensis MPA1U2]
gi|323396901|gb|EGA89718.1| YxdJ [Planococcus donghaensis MPA1U2]
Length = 234
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAS 116
K D+++EE A F PH+ + + P Y G+ RQ ++ P I I +Q
Sbjct: 33 AKDFDQIIEEFEA-FDPHLILLDINLPSYDGYYWCRQLRQQTTCPIIFISARSGEMDQVF 91
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PF+Y++ R + +R
Sbjct: 92 ALENGGDDFITK------PFHYEIVLAKIRSHLRR 120
>gi|456014639|gb|EMF48241.1| Two-component response regulator YvcP [Planococcus halocryophilus
Or1]
Length = 244
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAS 116
K D+++EE A F PH+ + + P Y G+ RQ ++ P I I +Q
Sbjct: 43 AKDFDQIIEEFEA-FDPHLILLDINLPSYDGYYWCRQLRQQTTCPIIFISARSGEMDQVF 101
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D ITK PF+Y++ R + +R
Sbjct: 102 ALENGGDDFITK------PFHYEIVLAKIRSHLRR 130
>gi|194889448|ref|XP_001977087.1| GG18439 [Drosophila erecta]
gi|190648736|gb|EDV46014.1| GG18439 [Drosophila erecta]
Length = 418
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 79 PHVKFMRVECPKYPGFCLTRQRKEYPFIEIFHSPEQASTRERGAD--PNITKYAVKVL-- 134
P V +V+C K+ G C T Q YP + +F E+ S + +G P IT + K L
Sbjct: 89 PKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESIKFKGTRDLPAITDFINKELGA 148
Query: 135 PFNYDLS 141
P DL
Sbjct: 149 PAEGDLG 155
>gi|389819970|ref|ZP_10209540.1| hypothetical protein A1A1_16023 [Planococcus antarcticus DSM 14505]
gi|388463086|gb|EIM05460.1| hypothetical protein A1A1_16023 [Planococcus antarcticus DSM 14505]
Length = 234
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 63 TKHLDRVLEEAAAEFYPHVKFMRVECPKYPGFCLTRQRKEY---PFIEIFHSP---EQAS 116
K DR++EE A F PH+ + + P Y G+ RQ ++ P I I +Q
Sbjct: 33 AKDFDRIIEEFEA-FDPHLILLDINLPSYDGYYWCRQLRQQTTCPIIFISARSGEMDQVF 91
Query: 117 TRERGADPNITKYAVKVLPFNYDLSAYGFREYFKR 151
E G D I K PF+Y++ R + +R
Sbjct: 92 ALENGGDDFIMK------PFHYEIVLAKIRSHLRR 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,842,709,550
Number of Sequences: 23463169
Number of extensions: 151471621
Number of successful extensions: 375937
Number of sequences better than 100.0: 78
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 375897
Number of HSP's gapped (non-prelim): 87
length of query: 240
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 102
effective length of database: 9,121,278,045
effective search space: 930370360590
effective search space used: 930370360590
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)