Your job contains 1 sequence.
>026307
MGELFDIEGHFGQYVSIFDVKDDTAGLSTTVFGYRCKEMSRTGCGSWSLNLPSTALKSNH
PSVNILKSNTLYSPDRLVSGSYLRASPRFCGQIKAPATAAAMEAEQSGGTATNSISNPPM
KLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVP
HSLQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVAELGDKNDDCYIVNAAVYVGY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026307
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029964 - symbol:AT1G29040 species:3702 "Arabi... 547 8.0e-53 1
UNIPROTKB|Q723D8 - symbol:LMOf2365_0541 "Putative unchara... 236 7.2e-20 1
UNIPROTKB|Q5LLY4 - symbol:SPO3781 "Uncharacterized protei... 138 2.2e-09 1
TIGR_CMR|SPO_3781 - symbol:SPO_3781 "conserved hypothetic... 138 2.2e-09 1
UNIPROTKB|Q5LLY3 - symbol:SPO3782 "Uncharacterized protei... 130 2.0e-08 1
TIGR_CMR|SPO_3782 - symbol:SPO_3782 "conserved hypothetic... 130 2.0e-08 1
UNIPROTKB|Q5LLP6 - symbol:SPO3876 "Uncharacterized protei... 120 2.8e-07 1
TIGR_CMR|SPO_3876 - symbol:SPO_3876 "conserved hypothetic... 120 2.8e-07 1
UNIPROTKB|Q5LLP7 - symbol:SPO3875 "Uncharacterized protei... 100 5.3e-05 1
TIGR_CMR|SPO_3875 - symbol:SPO_3875 "conserved hypothetic... 100 5.3e-05 1
>TAIR|locus:2029964 [details] [associations]
symbol:AT1G29040 species:3702 "Arabidopsis thaliana"
[GO:0005773 "vacuole" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR018316 GO:GO:0005525 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005773 GO:GO:0043234
GO:GO:0003924 GO:GO:0051258 Gene3D:3.30.1330.20 UniGene:At.15814
UniGene:At.20772 EMBL:AY085924 EMBL:AY150483 IPI:IPI00518228
RefSeq:NP_001154380.1 RefSeq:NP_564317.1 ProteinModelPortal:Q8LDL9
SMR:Q8LDL9 PaxDb:Q8LDL9 PRIDE:Q8LDL9 EnsemblPlants:AT1G29040.1
EnsemblPlants:AT1G29040.4 GeneID:839778 KEGG:ath:AT1G29040
TAIR:At1g29040 eggNOG:NOG15692 HOGENOM:HOG000238556
InParanoid:Q8LDL9 OMA:DQMKLQI PhylomeDB:Q8LDL9
ProtClustDB:CLSN2688061 Genevestigator:Q8LDL9 InterPro:IPR011719
Pfam:PF09585 TIGRFAMs:TIGR02058 Uniprot:Q8LDL9
Length = 198
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 104/136 (76%), Positives = 119/136 (87%)
Query: 105 EQSGGTATNSISNPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIP 164
E + T T + N MKLLFVEMGVGYDQHGQDVT+AAM+AC++AISSNSIPAFRRGSIP
Sbjct: 63 ETTAETITGGVPNNTMKLLFVEMGVGYDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIP 122
Query: 165 GVSFEQMKLLIKLGVPHSLQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVAELGD 224
GVSF +MKL IKLGVPHSL Q LD+++VKS+FPYGKI++VEVVDGGLICSSGV V E+GD
Sbjct: 123 GVSFGEMKLQIKLGVPHSLHQQLDLDKVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGD 182
Query: 225 KNDDCYIVNAAVYVGY 240
N+DCYIVN AVYVGY
Sbjct: 183 TNEDCYIVNVAVYVGY 198
>UNIPROTKB|Q723D8 [details] [associations]
symbol:LMOf2365_0541 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR018316 GO:GO:0005525 GO:GO:0043234
GO:GO:0003924 EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0051258
Gene3D:3.30.1330.20 eggNOG:NOG15692 HOGENOM:HOG000238556
InterPro:IPR011719 Pfam:PF09585 TIGRFAMs:TIGR02058
RefSeq:YP_013146.1 ProteinModelPortal:Q723D8 STRING:Q723D8
GeneID:2799562 KEGG:lmf:LMOf2365_0541 PATRIC:20322287 OMA:NAIAHNA
ProtClustDB:CLSK563945 Uniprot:Q723D8
Length = 119
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 48/120 (40%), Positives = 79/120 (65%)
Query: 121 KLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVP 180
++LF++ G G D HGQ++T AA RA R+AI +NS+P + G +P + M + IKL +P
Sbjct: 3 QILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQ-GLLPDGDLQNMVVNIKLALP 61
Query: 181 HSLQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVAELGDKNDDCYIVNAAVYVGY 240
++ LD + ++++ PYG + +E + GG++ +SG+ + + DKND YIVNA+V GY
Sbjct: 62 CD-EEKLDEDTIRAIIPYGTVT-IEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY 119
>UNIPROTKB|Q5LLY4 [details] [associations]
symbol:SPO3781 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR018316
GO:GO:0005525 GO:GO:0043234 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0051258 Gene3D:3.30.1330.20
HOGENOM:HOG000238556 InterPro:IPR011719 Pfam:PF09585
TIGRFAMs:TIGR02058 RefSeq:YP_168975.1 ProteinModelPortal:Q5LLY4
GeneID:3196419 KEGG:sil:SPO3781 PATRIC:23381059 Uniprot:Q5LLY4
Length = 125
Score = 138 (53.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 120 MKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGV 179
MK L E+G+G D HG D T AA+R DAI +S+ F P QM++ + +GV
Sbjct: 1 MKPLICELGMGADVHGHDYTKAALRGVSDAIRHSSLTLFYAYKHPS----QMRVEVTVGV 56
Query: 180 PHSLQQLLDIERVKSVFPYGKILDVEVVDGGL 211
P + +D + V + P+G + +V VV GGL
Sbjct: 57 PEP--EKVDKKAVAAALPFGAV-EVTVVQGGL 85
>TIGR_CMR|SPO_3781 [details] [associations]
symbol:SPO_3781 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018316 GO:GO:0005525 GO:GO:0043234 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0051258
Gene3D:3.30.1330.20 HOGENOM:HOG000238556 InterPro:IPR011719
Pfam:PF09585 TIGRFAMs:TIGR02058 RefSeq:YP_168975.1
ProteinModelPortal:Q5LLY4 GeneID:3196419 KEGG:sil:SPO3781
PATRIC:23381059 Uniprot:Q5LLY4
Length = 125
Score = 138 (53.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 120 MKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGV 179
MK L E+G+G D HG D T AA+R DAI +S+ F P QM++ + +GV
Sbjct: 1 MKPLICELGMGADVHGHDYTKAALRGVSDAIRHSSLTLFYAYKHPS----QMRVEVTVGV 56
Query: 180 PHSLQQLLDIERVKSVFPYGKILDVEVVDGGL 211
P + +D + V + P+G + +V VV GGL
Sbjct: 57 PEP--EKVDKKAVAAALPFGAV-EVTVVQGGL 85
>UNIPROTKB|Q5LLY3 [details] [associations]
symbol:SPO3782 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR018316
GO:GO:0005525 GO:GO:0043234 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0051258 Gene3D:3.30.1330.20
HOGENOM:HOG000238556 InterPro:IPR011719 Pfam:PF09585
TIGRFAMs:TIGR02058 RefSeq:YP_168976.1 ProteinModelPortal:Q5LLY3
DNASU:3196535 GeneID:3196535 KEGG:sil:SPO3782 PATRIC:23381061
Uniprot:Q5LLY3
Length = 114
Score = 130 (50.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 119 PMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLG 178
P V+MG+G D GQD T AA RA DA+ N + A +P ++M + I++G
Sbjct: 2 PKTQFAVQMGMGTDLKGQDYTKAAARAVHDALHRNFLTAGAAFDLP---LDRMIVDIRVG 58
Query: 179 VPHSLQQLLDIERVKSVFPYGKILDVEVVDGGL 211
V + +D+E VKS P G++ VE V GGL
Sbjct: 59 VGRP--EAVDLEVVKSEAPVGRVT-VEAVQGGL 88
>TIGR_CMR|SPO_3782 [details] [associations]
symbol:SPO_3782 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018316 GO:GO:0005525 GO:GO:0043234 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0051258
Gene3D:3.30.1330.20 HOGENOM:HOG000238556 InterPro:IPR011719
Pfam:PF09585 TIGRFAMs:TIGR02058 RefSeq:YP_168976.1
ProteinModelPortal:Q5LLY3 DNASU:3196535 GeneID:3196535
KEGG:sil:SPO3782 PATRIC:23381061 Uniprot:Q5LLY3
Length = 114
Score = 130 (50.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 119 PMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLG 178
P V+MG+G D GQD T AA RA DA+ N + A +P ++M + I++G
Sbjct: 2 PKTQFAVQMGMGTDLKGQDYTKAAARAVHDALHRNFLTAGAAFDLP---LDRMIVDIRVG 58
Query: 179 VPHSLQQLLDIERVKSVFPYGKILDVEVVDGGL 211
V + +D+E VKS P G++ VE V GGL
Sbjct: 59 VGRP--EAVDLEVVKSEAPVGRVT-VEAVQGGL 88
>UNIPROTKB|Q5LLP6 [details] [associations]
symbol:SPO3876 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR018316
GO:GO:0005525 GO:GO:0043234 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0051258 Gene3D:3.30.1330.20
HOGENOM:HOG000238556 InterPro:IPR011719 Pfam:PF09585
RefSeq:YP_169064.1 ProteinModelPortal:Q5LLP6 GeneID:3196196
KEGG:sil:SPO3876 PATRIC:23381257 OMA:EMGMGND
ProtClustDB:CLSK2767340 Uniprot:Q5LLP6
Length = 125
Score = 120 (47.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 123 LFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHS 182
+ +EMG G D +GQD T AA RA +DA+ +SI F + G+ QM++ + +GV
Sbjct: 6 MILEMGTGNDLYGQDYTKAARRAVQDALHHSSITLFSK---LGIDHGQMRVQVTIGVQRP 62
Query: 183 LQQLLDIERVKSVFPYGKILDVEVVDGGL 211
Q +D + V + P G + V V GGL
Sbjct: 63 DQ--VDCDAVAAELPRG-VATVCAVLGGL 88
>TIGR_CMR|SPO_3876 [details] [associations]
symbol:SPO_3876 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018316 GO:GO:0005525 GO:GO:0043234 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0051258
Gene3D:3.30.1330.20 HOGENOM:HOG000238556 InterPro:IPR011719
Pfam:PF09585 RefSeq:YP_169064.1 ProteinModelPortal:Q5LLP6
GeneID:3196196 KEGG:sil:SPO3876 PATRIC:23381257 OMA:EMGMGND
ProtClustDB:CLSK2767340 Uniprot:Q5LLP6
Length = 125
Score = 120 (47.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 123 LFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHS 182
+ +EMG G D +GQD T AA RA +DA+ +SI F + G+ QM++ + +GV
Sbjct: 6 MILEMGTGNDLYGQDYTKAARRAVQDALHHSSITLFSK---LGIDHGQMRVQVTIGVQRP 62
Query: 183 LQQLLDIERVKSVFPYGKILDVEVVDGGL 211
Q +D + V + P G + V V GGL
Sbjct: 63 DQ--VDCDAVAAELPRG-VATVCAVLGGL 88
>UNIPROTKB|Q5LLP7 [details] [associations]
symbol:SPO3875 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR018316
GO:GO:0005525 GO:GO:0043234 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0051258 Gene3D:3.30.1330.20
HOGENOM:HOG000238556 InterPro:IPR011719 Pfam:PF09585
RefSeq:YP_169063.1 ProteinModelPortal:Q5LLP7 GeneID:3195091
KEGG:sil:SPO3875 PATRIC:23381255 OMA:KDALWHN ProtClustDB:CLSK759325
Uniprot:Q5LLP7
Length = 116
Score = 100 (40.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 123 LFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHS 182
+ VE G+G +D T AA+RA +DA+ NS+ + G E M + ++GV
Sbjct: 6 VLVEFGMGSSLRREDYTEAALRALKDALWHNSV---NMAELFGFPKEAMIVDAEIGVQRP 62
Query: 183 LQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVAELGDKNDDCYIVNAAVYVGY 240
+ +D + +VFPYG+ ++ V GGL + + G + I NAAV V +
Sbjct: 63 --EAVDNVALAAVFPYGQP-NITVRQGGL----DIDKPQGGGRT---VIANAAVVVSF 110
>TIGR_CMR|SPO_3875 [details] [associations]
symbol:SPO_3875 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018316 GO:GO:0005525 GO:GO:0043234 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0051258
Gene3D:3.30.1330.20 HOGENOM:HOG000238556 InterPro:IPR011719
Pfam:PF09585 RefSeq:YP_169063.1 ProteinModelPortal:Q5LLP7
GeneID:3195091 KEGG:sil:SPO3875 PATRIC:23381255 OMA:KDALWHN
ProtClustDB:CLSK759325 Uniprot:Q5LLP7
Length = 116
Score = 100 (40.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 123 LFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHS 182
+ VE G+G +D T AA+RA +DA+ NS+ + G E M + ++GV
Sbjct: 6 VLVEFGMGSSLRREDYTEAALRALKDALWHNSV---NMAELFGFPKEAMIVDAEIGVQRP 62
Query: 183 LQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVAELGDKNDDCYIVNAAVYVGY 240
+ +D + +VFPYG+ ++ V GGL + + G + I NAAV V +
Sbjct: 63 --EAVDNVALAAVFPYGQP-NITVRQGGL----DIDKPQGGGRT---VIANAAVVVSF 110
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 230 0.00083 113 3 11 22 0.41 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 599 (64 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.42u 0.13s 17.55t Elapsed: 00:00:01
Total cpu time: 17.42u 0.13s 17.55t Elapsed: 00:00:01
Start: Fri May 10 07:00:39 2013 End: Fri May 10 07:00:40 2013