Query 026308
Match_columns 240
No_of_seqs 246 out of 1570
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:26:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026308.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026308hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hpd_A Hydroxyethylthiazole ki 100.0 9.7E-48 3.3E-52 319.5 19.5 237 1-240 27-264 (265)
2 3dzv_A 4-methyl-5-(beta-hydrox 100.0 6.7E-45 2.3E-49 304.6 19.9 227 1-229 29-262 (273)
3 1v8a_A Hydroxyethylthiazole ki 100.0 4.2E-45 1.4E-49 306.5 18.3 236 1-239 27-263 (265)
4 1ekq_A Hydroxyethylthiazole ki 100.0 8.8E-41 3E-45 281.5 20.9 237 1-239 29-269 (272)
5 3nl6_A Thiamine biosynthetic b 100.0 1.2E-39 4E-44 296.3 19.5 225 1-228 276-527 (540)
6 3rpz_A ADP/ATP-dependent NAD(P 100.0 7.4E-28 2.5E-32 202.4 15.2 179 26-227 94-276 (279)
7 3rss_A Putative uncharacterize 99.9 1.1E-26 3.7E-31 209.7 15.2 186 22-228 312-499 (502)
8 3bgk_A SMU.573, putative uncha 99.9 1E-26 3.5E-31 198.6 11.2 187 23-228 118-308 (311)
9 2r3b_A YJEF-related protein; p 99.9 3.5E-26 1.2E-30 195.2 13.9 186 23-229 104-292 (310)
10 3k5w_A Carbohydrate kinase; 11 99.9 3.1E-24 1.1E-28 192.2 14.3 179 28-227 290-469 (475)
11 3mbh_A Putative phosphomethylp 99.9 9.9E-22 3.4E-26 166.7 19.7 182 30-222 77-279 (291)
12 2i5b_A Phosphomethylpyrimidine 99.9 4.3E-21 1.5E-25 160.8 20.7 170 30-214 74-260 (271)
13 3pzs_A PM kinase, pyridoxamine 99.9 1.5E-21 5.3E-26 165.3 17.5 166 29-207 76-263 (289)
14 3h74_A Pyridoxal kinase; PSI-I 99.9 5.9E-21 2E-25 161.2 16.9 180 30-225 74-273 (282)
15 1ub0_A THID, phosphomethylpyri 99.9 1.1E-20 3.9E-25 157.1 18.4 168 31-213 71-253 (258)
16 3rm5_A Hydroxymethylpyrimidine 99.9 1E-20 3.5E-25 173.2 18.4 170 30-210 91-282 (550)
17 3zs7_A Pyridoxal kinase; trans 99.9 2.2E-20 7.6E-25 159.0 18.3 163 30-207 76-265 (300)
18 1jxh_A Phosphomethylpyrimidine 99.8 8.5E-20 2.9E-24 154.5 19.5 160 31-205 95-270 (288)
19 2ddm_A Pyridoxine kinase; pyri 99.8 1.6E-19 5.6E-24 152.1 17.0 166 28-206 86-269 (283)
20 3umo_A 6-phosphofructokinase i 99.8 6.5E-19 2.2E-23 150.1 19.8 154 29-200 129-286 (309)
21 2f02_A Tagatose-6-phosphate ki 99.8 8.5E-19 2.9E-23 150.5 19.5 158 27-202 126-289 (323)
22 2jg5_A Fructose 1-phosphate ki 99.8 8.3E-19 2.8E-23 149.1 18.9 155 28-201 123-280 (306)
23 2jg1_A Tagatose-6-phosphate ki 99.8 1.7E-18 5.8E-23 149.1 19.7 158 27-202 144-306 (330)
24 1rkd_A Ribokinase; carbohydrat 99.8 6.1E-19 2.1E-23 150.3 16.7 156 26-202 130-287 (309)
25 2abq_A Fructose 1-phosphate ki 99.8 2.9E-18 9.8E-23 146.0 19.9 158 28-203 123-282 (306)
26 3ry7_A Ribokinase; transferase 99.8 3.8E-19 1.3E-23 151.1 14.2 155 23-198 126-283 (304)
27 3cqd_A 6-phosphofructokinase i 99.8 1.9E-18 6.4E-23 147.2 17.8 155 28-201 129-287 (309)
28 3ie7_A LIN2199 protein; phosph 99.8 2.8E-18 9.6E-23 146.9 16.0 165 26-219 129-297 (320)
29 2yxt_A Pyridoxal kinase; beta 99.8 1.6E-17 5.6E-22 141.8 19.3 165 28-206 74-272 (312)
30 2fv7_A Ribokinase; structural 99.8 3.9E-18 1.3E-22 146.9 15.4 156 27-202 151-312 (331)
31 3kzh_A Probable sugar kinase; 99.8 1.8E-17 6E-22 142.5 19.2 157 25-202 131-289 (328)
32 2qhp_A Fructokinase; NP_810670 99.8 3.1E-18 1E-22 145.0 13.9 165 25-202 109-279 (296)
33 4e69_A 2-dehydro-3-deoxyglucon 99.8 9.7E-18 3.3E-22 144.3 17.2 161 26-202 141-311 (328)
34 4e84_A D-beta-D-heptose 7-phos 99.8 1.4E-17 4.7E-22 144.7 17.8 155 25-202 181-338 (352)
35 3vas_A Putative adenosine kina 99.8 2.8E-18 9.7E-23 150.0 13.1 166 25-202 173-352 (370)
36 2afb_A 2-keto-3-deoxygluconate 99.8 1.7E-17 5.9E-22 143.8 17.7 172 26-201 134-323 (351)
37 3ktn_A Carbohydrate kinase, PF 99.8 6.1E-18 2.1E-22 146.3 14.6 168 25-201 124-311 (346)
38 4du5_A PFKB; structural genomi 99.8 2.9E-17 1E-21 141.7 18.6 160 26-202 148-317 (336)
39 2ajr_A Sugar kinase, PFKB fami 99.8 9.5E-18 3.2E-22 144.4 15.1 155 27-200 143-304 (331)
40 1bx4_A Protein (adenosine kina 99.8 4.5E-18 1.6E-22 147.1 12.4 165 25-201 156-331 (345)
41 3otx_A Adenosine kinase, putat 99.8 9.4E-18 3.2E-22 145.3 13.5 166 25-202 157-333 (347)
42 3lhx_A Ketodeoxygluconokinase; 99.7 2E-17 6.8E-22 141.6 14.8 163 23-202 122-298 (319)
43 3loo_A Anopheles gambiae adeno 99.7 8E-18 2.7E-22 146.8 12.5 167 25-203 171-350 (365)
44 2abs_A Adenosine kinase, AK; r 99.7 5.6E-17 1.9E-21 142.3 17.1 178 22-202 172-370 (383)
45 3iq0_A Putative ribokinase II; 99.7 3.1E-17 1.1E-21 141.1 15.2 159 26-201 126-291 (330)
46 2rbc_A Sugar kinase, AGR_C_456 99.7 9.3E-17 3.2E-21 139.0 18.0 150 26-202 153-308 (343)
47 1vm7_A Ribokinase; TM0960, str 99.7 3.6E-17 1.2E-21 139.7 13.6 153 25-201 135-289 (311)
48 4e3a_A Sugar kinase protein; s 99.7 1E-16 3.6E-21 139.2 15.3 159 26-201 167-331 (352)
49 2qcv_A Putative 5-dehydro-2-de 99.7 1.5E-16 5E-21 136.8 15.7 162 27-202 135-305 (332)
50 2nwh_A AGR_C_3442P, carbohydra 99.7 1.3E-16 4.4E-21 136.5 15.2 155 26-202 130-287 (317)
51 3kd6_A Carbohydrate kinase, PF 99.7 4.3E-16 1.5E-20 133.0 16.8 156 24-202 113-276 (313)
52 3h49_A Ribokinase; transferase 99.7 3.1E-15 1.1E-19 128.3 20.6 159 26-202 131-294 (325)
53 3ljs_A Fructokinase; fructokia 99.7 1E-16 3.6E-21 138.2 11.0 160 26-198 125-304 (338)
54 3pl2_A Sugar kinase, ribokinas 99.7 2.4E-15 8.4E-20 128.4 18.6 159 26-202 131-297 (319)
55 1tyy_A Putative sugar kinase; 99.7 1E-16 3.4E-21 138.5 7.5 161 26-201 137-308 (339)
56 3hj6_A Fructokinase, FRK; fruc 99.7 3.9E-17 1.3E-21 140.3 4.9 156 25-197 139-302 (327)
57 1v1a_A 2-keto-3-deoxygluconate 99.7 3E-15 1E-19 127.4 16.2 154 26-202 121-283 (309)
58 2c4e_A Sugar kinase MJ0406; tr 99.7 1.3E-15 4.4E-20 129.3 13.5 147 29-201 129-278 (302)
59 3uq6_A Adenosine kinase, putat 99.6 1.1E-15 3.9E-20 133.5 11.7 166 25-202 175-354 (372)
60 2pkf_A Adenosine kinase; trans 99.6 4.4E-15 1.5E-19 127.9 14.2 150 28-202 146-299 (334)
61 3b1n_A Ribokinase, putative; r 99.6 8.4E-15 2.9E-19 125.8 15.3 149 29-202 134-285 (326)
62 3go6_A Ribokinase RBSK; phosph 99.6 7.4E-15 2.5E-19 125.3 14.0 141 24-201 137-283 (310)
63 3ikh_A Carbohydrate kinase; tr 99.6 8.6E-15 2.9E-19 124.2 13.5 139 25-202 126-268 (299)
64 1vk4_A PFKB carbohydrate kinas 99.6 8E-15 2.7E-19 124.3 12.5 152 29-202 118-279 (298)
65 2v78_A Fructokinase; transfera 99.6 2E-14 6.9E-19 122.5 13.1 156 26-202 124-290 (313)
66 2dcn_A Hypothetical fructokina 99.6 1.7E-14 5.9E-19 122.7 11.3 153 26-201 124-287 (311)
67 4gm6_A PFKB family carbohydrat 99.5 7.7E-14 2.6E-18 120.7 13.4 183 24-224 144-344 (351)
68 2hlz_A Ketohexokinase; non-pro 99.5 1.5E-13 5.2E-18 117.1 15.1 147 28-202 144-304 (312)
69 3ewm_A Uncharacterized sugar k 99.5 1.5E-13 5.2E-18 117.1 14.3 149 26-201 120-280 (313)
70 3bf5_A Ribokinase related prot 99.4 3.8E-13 1.3E-17 114.4 10.0 138 29-202 139-278 (306)
71 3drw_A ADP-specific phosphofru 92.5 2.1 7.2E-05 38.0 12.6 104 27-133 233-350 (474)
72 3bc8_A O-phosphoseryl-tRNA(SEC 74.1 2.8 9.7E-05 36.9 4.1 66 4-69 157-237 (450)
73 3hl2_A O-phosphoseryl-tRNA(SEC 67.2 3.8 0.00013 36.5 3.3 65 4-68 175-254 (501)
74 3kts_A Glycerol uptake operon 56.7 16 0.00055 28.2 4.8 78 12-95 8-91 (192)
75 1ua4_A Glucokinase, ADP-depend 54.8 62 0.0021 28.4 8.8 102 29-134 224-336 (455)
76 2k2w_A Recombination and DNA r 52.9 8.6 0.00029 27.2 2.5 65 3-68 29-100 (118)
77 3tr9_A Dihydropteroate synthas 51.1 40 0.0014 28.1 6.7 65 4-68 117-201 (314)
78 3fij_A LIN1909 protein; 11172J 48.2 23 0.00078 28.2 4.7 60 5-64 34-112 (254)
79 2y5s_A DHPS, dihydropteroate s 45.2 58 0.002 26.7 6.8 65 4-68 109-195 (294)
80 3s83_A Ggdef family protein; s 44.6 83 0.0028 24.6 7.6 80 47-142 139-218 (259)
81 1eye_A DHPS 1, dihydropteroate 44.6 48 0.0017 27.0 6.2 23 46-68 154-179 (280)
82 2q7x_A UPF0052 protein SP_1565 43.6 18 0.00062 30.3 3.5 43 22-64 176-220 (326)
83 1eiw_A Hypothetical protein MT 42.3 34 0.0012 23.7 4.3 43 26-69 34-77 (111)
84 1aj0_A DHPS, dihydropteroate s 41.5 56 0.0019 26.6 6.1 65 4-68 102-187 (282)
85 2p0y_A Hypothetical protein LP 40.1 20 0.00067 30.3 3.2 41 23-63 181-223 (341)
86 4f3h_A Fimxeal, putative uncha 39.0 87 0.003 24.3 6.9 80 47-142 143-222 (250)
87 4adb_A Succinylornithine trans 38.3 20 0.00069 29.9 3.1 50 20-69 172-226 (406)
88 2ppv_A Uncharacterized protein 38.0 28 0.00097 29.2 3.8 46 23-68 170-218 (332)
89 3guw_A Uncharacterized protein 37.9 22 0.00075 28.6 3.1 59 10-68 69-131 (261)
90 3dzz_A Putative pyridoxal 5'-p 36.5 24 0.00082 29.2 3.2 50 20-69 148-202 (391)
91 1to3_A Putative aldolase YIHT; 36.0 80 0.0027 25.9 6.3 25 45-69 140-164 (304)
92 4hjf_A Ggdef family protein; s 35.7 1.4E+02 0.0047 24.7 7.9 80 47-142 212-291 (340)
93 3ijp_A DHPR, dihydrodipicolina 35.0 1.3E+02 0.0043 24.6 7.3 64 23-94 81-144 (288)
94 3qtg_A Pyruvate kinase, PK; TI 34.3 45 0.0015 29.3 4.6 47 23-69 239-290 (461)
95 2e7j_A SEP-tRNA:Cys-tRNA synth 34.1 23 0.0008 29.0 2.8 21 49-69 166-186 (371)
96 1v72_A Aldolase; PLP-dependent 33.7 36 0.0012 27.6 3.8 23 46-68 159-181 (356)
97 4dq6_A Putative pyridoxal phos 33.2 29 0.00098 28.7 3.2 49 21-69 155-206 (391)
98 3bzy_B ESCU; auto cleavage pro 32.6 44 0.0015 21.9 3.3 23 47-69 27-49 (83)
99 1vkf_A Glycerol uptake operon 32.5 32 0.0011 26.4 3.0 43 29-76 30-72 (188)
100 4drs_A Pyruvate kinase; glycol 32.5 23 0.00077 31.8 2.5 49 23-71 279-332 (526)
101 2r6o_A Putative diguanylate cy 32.2 95 0.0033 25.1 6.2 80 47-142 163-242 (294)
102 1js3_A DDC;, DOPA decarboxylas 31.9 15 0.0005 32.1 1.2 50 20-69 218-274 (486)
103 2yci_X 5-methyltetrahydrofolat 31.5 1.3E+02 0.0045 24.2 6.8 39 30-68 47-86 (271)
104 3nbm_A PTS system, lactose-spe 31.5 33 0.0011 23.6 2.7 42 23-69 46-88 (108)
105 2ffc_A Orotidine 5-monophospha 30.9 54 0.0018 27.8 4.4 61 34-94 130-196 (353)
106 3f9t_A TDC, L-tyrosine decarbo 30.8 18 0.00063 29.8 1.6 49 20-69 159-210 (397)
107 3ecd_A Serine hydroxymethyltra 30.0 40 0.0014 28.2 3.6 46 20-68 160-208 (425)
108 4gqr_A Pancreatic alpha-amylas 30.0 31 0.0011 29.7 3.0 28 45-72 75-102 (496)
109 2oqx_A Tryptophanase; lyase, p 29.7 47 0.0016 28.3 4.1 46 20-67 168-224 (467)
110 2e28_A Pyruvate kinase, PK; al 29.4 34 0.0012 31.1 3.1 49 23-71 230-283 (587)
111 3l8a_A METC, putative aminotra 29.2 32 0.0011 29.1 2.9 50 20-69 182-236 (421)
112 3cwc_A Putative glycerate kina 28.7 56 0.0019 28.0 4.2 45 23-67 280-326 (383)
113 4f3y_A DHPR, dihydrodipicolina 28.7 1.1E+02 0.0037 24.7 5.8 64 23-94 66-129 (272)
114 1d2f_A MALY protein; aminotran 28.5 41 0.0014 27.9 3.4 49 20-70 150-205 (390)
115 1ax4_A Tryptophanase; tryptoph 28.5 39 0.0013 28.9 3.3 23 46-68 203-225 (467)
116 3r89_A Orotidine 5'-phosphate 28.3 73 0.0025 26.1 4.7 63 33-95 60-129 (290)
117 2jis_A Cysteine sulfinic acid 28.2 18 0.00063 31.8 1.1 48 21-69 243-298 (515)
118 3hvy_A Cystathionine beta-lyas 28.1 49 0.0017 28.5 3.9 49 20-68 163-220 (427)
119 4gud_A Imidazole glycerol phos 27.8 97 0.0033 23.4 5.2 57 3-64 17-76 (211)
120 3piu_A 1-aminocyclopropane-1-c 27.6 37 0.0013 28.8 3.0 24 46-69 210-233 (435)
121 2okj_A Glutamate decarboxylase 27.5 18 0.00061 31.7 0.9 50 20-69 228-284 (504)
122 1tx2_A DHPS, dihydropteroate s 27.1 1.4E+02 0.0047 24.5 6.2 23 46-68 181-206 (297)
123 3igs_A N-acetylmannosamine-6-p 27.1 2.1E+02 0.0072 22.2 7.2 19 50-68 119-137 (232)
124 3kki_A CAI-1 autoinducer synth 27.0 36 0.0012 28.6 2.7 63 6-69 158-225 (409)
125 3g0t_A Putative aminotransfera 26.4 48 0.0017 27.9 3.5 49 21-69 171-224 (437)
126 3i16_A Aluminum resistance pro 26.4 56 0.0019 28.2 3.9 49 20-68 163-220 (427)
127 3kax_A Aminotransferase, class 26.3 49 0.0017 27.1 3.4 48 20-69 145-198 (383)
128 1iay_A ACC synthase 2, 1-amino 26.1 45 0.0015 28.1 3.2 25 46-70 207-231 (428)
129 2o2z_A Hypothetical protein; s 26.0 32 0.0011 28.7 2.2 42 23-64 171-214 (323)
130 2dr1_A PH1308 protein, 386AA l 26.0 22 0.00076 29.3 1.2 63 6-69 112-185 (386)
131 2bwn_A 5-aminolevulinate synth 25.9 44 0.0015 27.8 3.1 62 7-69 148-217 (401)
132 2vt1_B Surface presentation of 25.9 48 0.0016 22.2 2.6 23 47-69 27-49 (93)
133 3q58_A N-acetylmannosamine-6-p 25.8 2.3E+02 0.0079 22.0 7.2 18 50-67 119-136 (229)
134 1c7n_A Cystalysin; transferase 25.7 47 0.0016 27.6 3.2 48 21-70 153-207 (399)
135 2o1b_A Aminotransferase, class 25.5 43 0.0015 28.1 3.0 46 22-69 172-223 (404)
136 2dou_A Probable N-succinyldiam 25.5 47 0.0016 27.3 3.2 46 22-69 149-200 (376)
137 1yzy_A Hypothetical protein HI 25.4 91 0.0031 26.8 5.0 99 3-102 14-122 (413)
138 3sy8_A ROCR; TIM barrel phosph 25.2 2.2E+02 0.0076 23.8 7.5 80 47-142 276-355 (400)
139 3khd_A Pyruvate kinase; malari 25.2 53 0.0018 29.4 3.5 45 23-67 273-322 (520)
140 4e77_A Glutamate-1-semialdehyd 25.0 40 0.0014 28.5 2.7 24 47-70 221-244 (429)
141 3op7_A Aminotransferase class 25.0 59 0.002 26.6 3.7 47 20-68 143-195 (375)
142 1o1y_A Conserved hypothetical 24.5 1.3E+02 0.0044 23.4 5.5 61 4-64 29-97 (239)
143 3mad_A Sphingosine-1-phosphate 24.4 29 0.00099 30.4 1.7 48 20-68 228-277 (514)
144 2fds_A Orotidine-monophosphate 24.4 86 0.0029 26.5 4.5 61 34-94 120-186 (352)
145 3n0l_A Serine hydroxymethyltra 24.4 35 0.0012 28.5 2.2 47 20-68 152-200 (417)
146 3ht4_A Aluminum resistance pro 24.3 67 0.0023 27.6 4.0 49 20-68 154-209 (431)
147 2lpm_A Two-component response 24.3 97 0.0033 21.5 4.2 52 10-65 30-84 (123)
148 1g94_A Alpha-amylase; beta-alp 24.2 45 0.0015 28.8 2.9 29 45-73 63-91 (448)
149 1gd9_A Aspartate aminotransfer 24.1 53 0.0018 27.1 3.3 23 47-69 180-202 (389)
150 2yci_X 5-methyltetrahydrofolat 24.0 1.1E+02 0.0038 24.6 5.1 16 50-65 115-130 (271)
151 1zco_A 2-dehydro-3-deoxyphosph 24.0 2E+02 0.0068 22.9 6.5 82 46-138 73-163 (262)
152 3l52_A Orotidine 5'-phosphate 24.0 79 0.0027 25.8 4.1 62 33-94 63-133 (284)
153 1ivn_A Thioesterase I; hydrola 23.9 1.2E+02 0.0039 22.0 4.9 12 123-134 123-134 (190)
154 1ud2_A Amylase, alpha-amylase; 23.6 48 0.0016 28.9 3.0 28 45-72 79-106 (480)
155 4e3q_A Pyruvate transaminase; 23.6 90 0.0031 27.3 4.8 26 47-72 257-282 (473)
156 3bh4_A Alpha-amylase; calcium, 23.5 48 0.0016 28.9 3.0 28 45-72 77-104 (483)
157 1kmj_A Selenocysteine lyase; p 23.5 53 0.0018 27.1 3.2 48 21-69 154-203 (406)
158 3eag_A UDP-N-acetylmuramate:L- 23.4 84 0.0029 25.8 4.3 34 29-68 65-98 (326)
159 3tqx_A 2-amino-3-ketobutyrate 23.4 44 0.0015 27.6 2.6 62 7-69 143-214 (399)
160 1dih_A Dihydrodipicolinate red 23.3 1.4E+02 0.0048 23.9 5.6 63 24-94 66-128 (273)
161 3jzl_A Putative cystathionine 23.0 74 0.0025 27.2 4.0 50 20-69 148-204 (409)
162 1wpc_A Glucan 1,4-alpha-maltoh 23.0 50 0.0017 28.8 3.0 28 45-72 81-108 (485)
163 3pj0_A LMO0305 protein; struct 22.9 56 0.0019 26.5 3.2 38 29-68 136-179 (359)
164 2fvt_A Conserved hypothetical 22.7 99 0.0034 22.1 4.0 47 19-68 56-102 (135)
165 3ju3_A Probable 2-oxoacid ferr 22.7 1.9E+02 0.0064 19.8 5.8 51 29-85 12-63 (118)
166 1l9x_A Gamma-glutamyl hydrolas 22.7 1E+02 0.0034 25.4 4.6 35 5-39 58-95 (315)
167 2ord_A Acoat, acetylornithine 22.5 50 0.0017 27.4 2.8 48 20-69 172-226 (397)
168 3tfu_A Adenosylmethionine-8-am 22.4 58 0.002 28.1 3.3 25 47-71 255-279 (457)
169 2h9a_B CO dehydrogenase/acetyl 22.3 1.1E+02 0.0038 25.2 4.8 63 4-69 139-210 (310)
170 3u80_A 3-dehydroquinate dehydr 22.2 1.1E+02 0.0037 22.5 4.1 22 53-74 64-85 (151)
171 1hvx_A Alpha-amylase; hydrolas 22.2 53 0.0018 29.0 3.0 28 45-72 80-107 (515)
172 1svv_A Threonine aldolase; str 22.1 67 0.0023 25.9 3.5 23 47-69 164-186 (359)
173 3c01_E Surface presentation of 22.0 55 0.0019 22.2 2.4 23 47-69 27-49 (98)
174 3t7y_A YOP proteins translocat 21.9 56 0.0019 22.1 2.4 23 47-69 42-64 (97)
175 2qma_A Diaminobutyrate-pyruvat 21.8 40 0.0014 29.3 2.1 50 20-69 241-297 (497)
176 2dqw_A Dihydropteroate synthas 21.8 1.5E+02 0.005 24.3 5.4 23 46-68 176-199 (294)
177 2gb3_A Aspartate aminotransfer 21.8 94 0.0032 25.9 4.4 47 21-69 164-216 (409)
178 4e1o_A HDC, histidine decarbox 21.7 36 0.0012 29.6 1.8 50 20-69 224-280 (481)
179 1v2d_A Glutamine aminotransfer 21.5 62 0.0021 26.6 3.2 48 21-70 142-195 (381)
180 2epj_A Glutamate-1-semialdehyd 21.5 68 0.0023 27.1 3.5 50 20-70 189-247 (434)
181 3cf4_G Acetyl-COA decarboxylas 21.5 79 0.0027 23.2 3.5 48 19-69 22-71 (170)
182 1lwj_A 4-alpha-glucanotransfer 21.5 65 0.0022 27.7 3.4 29 46-74 69-97 (441)
183 3if2_A Aminotransferase; YP_26 21.4 69 0.0024 27.0 3.5 23 46-68 225-247 (444)
184 2guy_A Alpha-amylase A; (beta- 21.3 57 0.0019 28.4 3.0 28 46-73 97-124 (478)
185 3t05_A Pyruvate kinase, PK; te 21.2 52 0.0018 30.0 2.7 46 24-69 250-300 (606)
186 4hv4_A UDP-N-acetylmuramate--L 21.2 93 0.0032 27.3 4.4 35 28-68 79-113 (494)
187 3nra_A Aspartate aminotransfer 21.0 70 0.0024 26.4 3.4 47 21-69 169-221 (407)
188 3gbx_A Serine hydroxymethyltra 20.9 72 0.0024 26.5 3.5 46 20-68 157-205 (420)
189 3isl_A Purine catabolism prote 20.8 24 0.00081 29.5 0.4 57 7-68 104-174 (416)
190 2dkj_A Serine hydroxymethyltra 20.8 72 0.0025 26.4 3.5 46 20-68 151-199 (407)
191 2a9v_A GMP synthase; structura 20.8 1.2E+02 0.0042 23.0 4.6 59 3-64 28-89 (212)
192 2bas_A YKUI protein; EAL domai 20.8 97 0.0033 26.6 4.3 81 46-142 156-236 (431)
193 3vp6_A Glutamate decarboxylase 20.7 31 0.0011 30.4 1.1 50 20-69 231-287 (511)
194 2z9v_A Aspartate aminotransfer 20.5 25 0.00084 29.2 0.4 44 21-69 122-173 (392)
195 1f6y_A 5-methyltetrahydrofolat 20.4 1.5E+02 0.0053 23.6 5.2 64 4-67 81-161 (262)
196 1mxg_A Alpha amylase; hyperthe 20.4 71 0.0024 27.5 3.4 29 45-73 85-113 (435)
197 2r2n_A Kynurenine/alpha-aminoa 20.4 79 0.0027 26.6 3.7 24 46-69 210-233 (425)
198 2yrr_A Aminotransferase, class 20.3 27 0.00093 28.2 0.6 48 21-69 113-163 (353)
199 3fq8_A Glutamate-1-semialdehyd 20.3 74 0.0025 26.8 3.4 24 47-70 220-243 (427)
200 1ht6_A AMY1, alpha-amylase iso 20.1 74 0.0025 27.0 3.4 28 46-73 68-95 (405)
201 3hv8_A Protein FIMX; EAL phosp 20.0 1.3E+02 0.0044 23.6 4.7 78 47-141 153-230 (268)
No 1
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.7e-48 Score=319.47 Aligned_cols=237 Identities=40% Similarity=0.587 Sum_probs=214.0
Q ss_pred CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308 1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC 80 (240)
Q Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~ 80 (240)
+||+||++|++|++|+|+++++|+.++.+.+++++|++|++++.+.+.+....+.+++.++|+||||++.+.+.+|.+..
T Consensus 27 ~n~~AN~lLA~GasPiMa~~~~E~~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~ 106 (265)
T 3hpd_A 27 MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVS 106 (265)
T ss_dssp HHHHHHHHHHHTCEEEECCCTTTHHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHH
T ss_pred HHHHHHHHHHhCCchhhcCCHHHHHHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHH
Confidence 48999999999999999999999999999999999999999988888888899999999999999999999999988877
Q ss_pred HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCC-CChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308 81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS-HESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP 159 (240)
Q Consensus 81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~ 159 (240)
++++..++++||||.+|+..|.|... ..+|+|+. .+.++..+++++++++++++|++||..|++.++++++.++++.+
T Consensus 107 ~~ll~~~~~vIrgN~sEi~~L~g~~~-~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~d~I~dg~~~~~~~~G~~ 185 (265)
T 3hpd_A 107 LEILSRGVDVLKGNFGEISALLGEEG-KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHE 185 (265)
T ss_dssp HHHHHHCCSEEEEEHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCG
T ss_pred HHHHhcCCcEEcCCHHHHHHHhcccC-CCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCCeEEEcCCEEEEECCCCh
Confidence 88887789999999999999999764 45666642 34578889999999999999999999999999999999999999
Q ss_pred cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcccccccc
Q 026308 160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239 (240)
Q Consensus 160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (240)
.+.+++|+||+|+|++++|++++ ++++|+..|+.+++.|++.+.++..|+|+|..+++|.|+.+..+++.+++|++++
T Consensus 186 ~m~~vtGtGc~Lsg~iaa~lA~~--~~~~Aa~~a~~~~g~Age~Aa~~~~GpGsf~~~llD~L~~l~~~~~~~~~~i~~v 263 (265)
T 3hpd_A 186 LLGRVTGTGCMVAALTGAFVAVT--EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV 263 (265)
T ss_dssp GGGGSTTHHHHHHHHHHHHHTTS--CHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_pred HhhcCCccchHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHcCCHHHHHhhCCeEEe
Confidence 99988999999999999999985 7899999999999999999998878999999999999999999999999999997
Q ss_pred C
Q 026308 240 S 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 264 ~ 264 (265)
T 3hpd_A 264 E 264 (265)
T ss_dssp C
T ss_pred e
Confidence 5
No 2
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=100.00 E-value=6.7e-45 Score=304.63 Aligned_cols=227 Identities=30% Similarity=0.402 Sum_probs=197.2
Q ss_pred CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308 1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC 80 (240)
Q Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~ 80 (240)
+||+||++|++|+||+|+++++|+.++++.+|+++|++|++++.+.+.+..+++.+++.++|+||||++.+.+.+|.+..
T Consensus 29 ~n~~AN~~La~GasP~M~~~~~e~~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~ 108 (273)
T 3dzv_A 29 CESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVG 108 (273)
T ss_dssp HHHHHHHHHHTTCEEECCCCGGGHHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHH
T ss_pred hhhHHHHHHHcCCchhhcCCHHHHHHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHH
Confidence 48999999999999999999999999999999999999998877778888888889999999999999998888877666
Q ss_pred HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCC---CChH---HHHHHHHHHHHhcC-CEEEEecCccEEEcCcEEEE
Q 026308 81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS---HESM---DAMEAARCLAEASG-AIVAVSGAVDIVTDGRRVVG 153 (240)
Q Consensus 81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~---~~~~---~~~~~a~~l~~~~~-~~VvitG~~~~i~~~~~~~~ 153 (240)
++++..++++||||..|+++|+|... ..+|+|.. ...+ ++.+++++|+++++ ++|++||..|+++++++++.
T Consensus 109 ~~Ll~~~~~VItpN~~E~~~L~g~~~-~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~D~i~dg~~~~~ 187 (273)
T 3dzv_A 109 EKLVHNQPTVVKGNLSEMRTFCQLVS-HGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIV 187 (273)
T ss_dssp HHHHHTCCSEEEEEHHHHHHHTTCCC-C-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSSEEEECSSCEEE
T ss_pred HHHHhcCCcEECCCHHHHHHHhCCcc-cccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCeeEEEcCCEEEE
Confidence 66665579999999999999999765 34555531 1124 67789999999998 99999999999999888888
Q ss_pred EecCCccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHH
Q 026308 154 AHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAA 229 (240)
Q Consensus 154 ~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~ 229 (240)
++.+++.+.+++|+||+|+|+|+++++++ .++.+|+..|+.+++.|++.++++..|+|+|..+++|+|+.+..++
T Consensus 188 ~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g-~~~~~Aa~~A~~~~~~Age~A~~~~~g~Gsf~~~llD~L~~l~~~~ 262 (273)
T 3dzv_A 188 LQNGVPELDCFTGTGDLVGALVAALLGEG-NAPMTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQLSLLMKEK 262 (273)
T ss_dssp ECCCCGGGGSSTTHHHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHGGGST
T ss_pred eCCCCcccCCcCCchHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHcCCchH
Confidence 88888888888999999999999999996 8999999999999999999998876789999999999999987653
No 3
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=100.00 E-value=4.2e-45 Score=306.48 Aligned_cols=236 Identities=40% Similarity=0.586 Sum_probs=202.0
Q ss_pred CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308 1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC 80 (240)
Q Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~ 80 (240)
+||+||++|++|++|+|.++++++.++++++|++++|+|++++++.+.+..+++.+++.++|+||||++.+.++++.+..
T Consensus 27 ~~~~an~~la~gasp~M~~~~~e~~~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~ 106 (265)
T 1v8a_A 27 MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVS 106 (265)
T ss_dssp HHHHHHHHHHHTCEEEECCCTTTHHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHH
T ss_pred ecchHHHHHhcCCCccccCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHH
Confidence 47999999999999999999999999999999999999998766667777888888899999999999988777765555
Q ss_pred HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308 81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP 159 (240)
Q Consensus 81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~ 159 (240)
.++++..+++||||..|+++|+|.+. ..+|++... ..+++.+++++|+++++++||+||..++++++++.+.++.+++
T Consensus 107 ~~ll~~~~~vITPN~~E~~~L~g~~~-~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~~d~i~~~~~~~~~~~g~~ 185 (265)
T 1v8a_A 107 LEILSRGVDVLKGNFGEISALLGEEG-KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHE 185 (265)
T ss_dssp HHHHHHCCSEEEEEHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCG
T ss_pred HHHHHhCCcEEcCCHHHHHHHhCCcc-cccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCCCcEEEcCCEEEEEcCCCc
Confidence 56665349999999999999999754 234444211 2367888999999999999999999999998888888887777
Q ss_pred cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcccccccc
Q 026308 160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239 (240)
Q Consensus 160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (240)
.+.+++|+||+|+|+++++++++ .+ .+|+..|+.+|+.|++.++++..|+|++..+++|.|+.+..++|.++++++++
T Consensus 186 ~~~~~~GtGD~Lsg~iaa~lA~g-~~-~~Aa~~a~~~~~~Ag~~a~~~~~g~g~~~~~l~d~l~~l~~~~~~~~~~~~~~ 263 (265)
T 1v8a_A 186 LLGRVTGTGCMVAALTGAFVAVT-EP-LKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV 263 (265)
T ss_dssp GGGGSTTHHHHHHHHHHHHHTTS-CH-HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_pred CcCCccChhHHHHHHHHHHHhcC-CC-HHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhcCHHHHHhccceEee
Confidence 88778999999999999999996 78 99999999999999999988766899999999999999999999999998865
No 4
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=100.00 E-value=8.8e-41 Score=281.51 Aligned_cols=237 Identities=32% Similarity=0.540 Sum_probs=196.1
Q ss_pred CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308 1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC 80 (240)
Q Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~ 80 (240)
+|++||+++++|++|+|+++++++.++++.+|++++++|++++.+.+.+..+++.+++.++|+|+||++.+.+.++....
T Consensus 29 ~~~~an~~l~~Ga~p~m~~~~~e~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~ 108 (272)
T 1ekq_A 29 TNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESA 108 (272)
T ss_dssp HHHHHHHHHHHTCEEECCCCTTTHHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHH
T ss_pred hhhhHHHHHHcCCchhhcCCHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHH
Confidence 46799999999999999999999999999999999999998766677888888888899999999999977655554344
Q ss_pred HHHhc-cCCeEEcCCHHHHHHHHcCC-CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCC
Q 026308 81 LELVQ-LKPTVIRGNASEIIALSRAS-VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGV 158 (240)
Q Consensus 81 ~~~~~-~~~~vitPN~~E~~~L~g~~-~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~ 158 (240)
+++++ .++++||||..|+++|+|.+ . ..+|+|...+.+++.+++++|+++++++|++||..++++++++.+.++.+.
T Consensus 109 ~~ll~~~~~~vitPN~~E~~~L~g~~~~-~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~~~~i~~~~~~~~~~~~~ 187 (272)
T 1ekq_A 109 RDIIREVRLAAIRGNAAEIAHTVGVTDW-LIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGH 187 (272)
T ss_dssp HHHHHHSCCSEEEECHHHHHHHCC----------------HHHHHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCC
T ss_pred HHHHccCCCeEECCCHHHHHHHhCCCcc-cccCccCCCCHHHHHHHHHHHHHHcCCEEEEECCCCEEEeCCEEEEEcCCC
Confidence 46664 47999999999999999976 4 335555333456788899999999888899999988888877888888777
Q ss_pred ccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh--CCCccccHHHHHHHHhcCCHHHHhccccc
Q 026308 159 PMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM--AKGPASLRMHMIDCLHGLDQAALLSRTNI 236 (240)
Q Consensus 159 ~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~--~~~~g~~~~~~~~~l~~~~~~~~~~~~~~ 236 (240)
+.+.+++|+||+|+|+++++++++ .++.+|+++|+.+++.|++.+..+ ..|+|++..+++|+|+.+..+++.+++++
T Consensus 188 ~~~~~ttGaGD~lag~iaa~la~g-~~~~~A~~~A~~~~~~A~~~a~~~~~~~g~g~~~~~~id~l~~~~~~~~~~~~~~ 266 (272)
T 1ekq_A 188 KLLTKVTGAGCLLTSVVGAFCAVE-ENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATI 266 (272)
T ss_dssp GGGGGSTTHHHHHHHHHHHHHTTC-SSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCCHHHHHHHCCE
T ss_pred ccccCccCchHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHhcCHHHHHhhcce
Confidence 777788999999999999999996 899999999999999999998875 46889999999999999999999998888
Q ss_pred ccc
Q 026308 237 TAL 239 (240)
Q Consensus 237 ~~~ 239 (240)
+++
T Consensus 267 ~~~ 269 (272)
T 1ekq_A 267 ERV 269 (272)
T ss_dssp EEC
T ss_pred EEe
Confidence 753
No 5
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=100.00 E-value=1.2e-39 Score=296.29 Aligned_cols=225 Identities=28% Similarity=0.435 Sum_probs=193.7
Q ss_pred CchhhHHHHHcCCCcccCCCCCchhhhhcc-cCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHH
Q 026308 1 MDLVANTLLSAGASPAMLHTIEEIPDFTPH-VRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNA 79 (240)
Q Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~-~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~ 79 (240)
+||+||++|++|+||+|+++++|+.++.+. +++++|++|++++ .+.+..+++.+++.++|+||||++++.+.+|.+.
T Consensus 276 ~n~~AN~~La~GasPiM~~~~~E~~e~~~~~~~alvin~G~l~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~ 353 (540)
T 3nl6_A 276 QNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAP--PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLL 353 (540)
T ss_dssp HHHHHHHHHHTTSEEECCCCHHHHHHHTTSTTCEEEEESSCSCC--HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHH
T ss_pred HHHHHHHHHHcCCChhhcCCHHHHHHHHhccCCeEEEeCCCCCH--HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHH
Confidence 589999999999999999999999999999 9999999999866 6788888888999999999999999988888766
Q ss_pred HHHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCC--hHHHHHHHHHHHHhcCCEEEEecCccEEEcC--------
Q 026308 80 CLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHE--SMDAMEAARCLAEASGAIVAVSGAVDIVTDG-------- 148 (240)
Q Consensus 80 ~~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~--~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~-------- 148 (240)
.+++++ .+++|||||..|+++|+|......+|+|...+ .++..+++++|+++++++|++||..|+|+++
T Consensus 354 ~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~D~I~dg~~~~~~~~ 433 (540)
T 3nl6_A 354 NNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSL 433 (540)
T ss_dssp HHHHTTSCCCSEEEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEECSSSEEEEECCGGGBCCS
T ss_pred HHHHHhhCCCeEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCCeEEECCCccccccc
Confidence 677775 47899999999999999975213456664222 3788899999999999999999999999988
Q ss_pred -----------cEEEEEecCC-ccCCCccchhhHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHhhhhhCCCccc
Q 026308 149 -----------RRVVGAHNGV-PMMQKITATGCSVTALIAAFVAVDPL---HAFEATASALSVYGIAGEMGMSMAKGPAS 213 (240)
Q Consensus 149 -----------~~~~~~~~~~-~~~~~~~GaGD~lag~iaa~la~~~~---~~~~A~~~A~~~~~~a~~~a~~~~~~~g~ 213 (240)
+.++.+++++ +.+.+++|+||+|+|+||++++++ . ++++|+..|+.+++.|++.++++..|+|+
T Consensus 434 ~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~-~~~~~~~~Aa~~a~~~~~~Ag~~A~~~~~g~Gs 512 (540)
T 3nl6_A 434 SKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQ-PSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGS 512 (540)
T ss_dssp SSCCSSCCTTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTC-CTTCBHHHHHHHHHHHHHHHHHHHHHHCSSHHH
T ss_pred cccccccccCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 6788899888 899988999999999999999996 5 69999999999999999999887678999
Q ss_pred cHHHHHHHHhcCCHH
Q 026308 214 LRMHMIDCLHGLDQA 228 (240)
Q Consensus 214 ~~~~~~~~l~~~~~~ 228 (240)
|..+++|+|+.+..+
T Consensus 513 f~~~llD~L~~l~~~ 527 (540)
T 3nl6_A 513 FQVELIDALYRLTRE 527 (540)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhccc
Confidence 999999999998765
No 6
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.95 E-value=7.4e-28 Score=202.37 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=143.2
Q ss_pred hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHc
Q 026308 26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSR 103 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g 103 (240)
+.++++|++++|+|+..+. ...++++.+.+.+.|+|||+++... +.+. ..+++||||..|+++|+|
T Consensus 94 ~~l~~~davviGPGlg~~~---~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g 161 (279)
T 3rpz_A 94 QLEETYRAIAIGPGLPQTE---SVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTG 161 (279)
T ss_dssp CCSSCCSEEEECTTCCCCH---HHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHC
T ss_pred hhccCCCEEEECCCCCCCH---HHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhC
Confidence 3457899999999986543 2345556666778899999999653 1121 468999999999999999
Q ss_pred CCCCCCcCCCCCCC-hHHHHHHHHHHHHhcCCEEEEecCccEEEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308 104 ASVGPTKGVDSSHE-SMDAMEAARCLAEASGAIVAVSGAVDIVTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181 (240)
Q Consensus 104 ~~~~~~~~~~~~~~-~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~ 181 (240)
.+. .+ .++..+++++|+++++++|++||..+++++++ .++..+.+.+.+. ++|+||+|+|+|++++++
T Consensus 162 ~~~---------~~~~~d~~~aa~~la~~~~~~VvlKG~~~vi~~~~g~~~~~~~g~~~~a-t~GtGD~Lag~iaa~lA~ 231 (279)
T 3rpz_A 162 VPV---------NELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALA-KGGTGDTLTGMILGMLCC 231 (279)
T ss_dssp CCH---------HHHTTSHHHHHHHHHHHHTSEEEECSTTCEEECTTSCEEECCCCCGGGC-STTHHHHHHHHHHHHHHH
T ss_pred CCc---------cchHHHHHHHHHHHHHHcCeEEEEeCCCcEEECCCceEEEeCCCCCCCC-CCChHHHHHHHHHHHHHC
Confidence 754 12 24677889999999998999999999999876 4555555556665 599999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308 182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227 (240)
Q Consensus 182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~ 227 (240)
+ .++.+|++.|+++|+.|++.+.++....++.+.|+++.|+.+++
T Consensus 232 g-~~~~~A~~~a~~lh~~Ag~~a~~~~g~~~~~a~dl~~~lp~~~~ 276 (279)
T 3rpz_A 232 H-EDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWK 276 (279)
T ss_dssp C-SSHHHHHHHHHHHHHHHHHHHHHHSCTTSCCHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHH
Confidence 6 89999999999999999999888633478999999999987755
No 7
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.94 E-value=1.1e-26 Score=209.67 Aligned_cols=186 Identities=20% Similarity=0.287 Sum_probs=146.3
Q ss_pred CchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHH
Q 026308 22 EEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEII 99 (240)
Q Consensus 22 ~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~ 99 (240)
+++.+.++++|++++|+|+..+.... ..+.+.+++.++|+||||++..... +++++ ..+++||||..|++
T Consensus 312 ~~~~~~~~~~davviGpGlg~~~~~~--~~~~~~l~~~~~pvVlDadgl~~l~------~~ll~~~~~~~vlTPN~~E~~ 383 (502)
T 3rss_A 312 QECLELSKDVDVVAIGPGLGNNEHVR--EFVNEFLKTLEKPAVIDADAINVLD------TSVLKERKSPAVLTPHPGEMA 383 (502)
T ss_dssp HHHHHHHTTCSEEEECTTCCCSHHHH--HHHHHHHHHCCSCEEECHHHHHTCC------HHHHHHCSSCEEECCCHHHHH
T ss_pred HHHHHHhccCCEEEEeCCCCCCHHHH--HHHHHHHHhcCCCEEEeCcccchhc------HHHHhccCCCEEEeCCHHHHH
Confidence 34566778999999999997654321 2222245667999999999965322 23332 36899999999999
Q ss_pred HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308 100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179 (240)
Q Consensus 100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l 179 (240)
+|+|.+. . +..++ .+++++++++++++|++||..++++++++++..+.+.+.+.. +|+||+|+|++++++
T Consensus 384 ~L~g~~~------~--~~~~d-~~aa~~la~~~~~~VvlKG~~~vi~~~~~~~~~~~g~~~~at-~GsGD~Lag~iaa~l 453 (502)
T 3rss_A 384 RLVKKTV------G--DVKYN-YELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSK-GGSGDVLTGMIAGFI 453 (502)
T ss_dssp HHHTCCH------H--HHTTC-HHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCCGGGSS-TTHHHHHHHHHHHHH
T ss_pred HHhCCCc------c--chHHH-HHHHHHHHHHcCCEEEEeCCCeEEEcCCEEEEECCCCCcccc-CCchHHHHHHHHHHH
Confidence 9999753 0 11134 678899999998889999999999988777777766666654 999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHH
Q 026308 180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQA 228 (240)
Q Consensus 180 a~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~ 228 (240)
+++ .++.+|++.|+++|+.|++.+.+ .++++.+.|+++.|+.++++
T Consensus 454 A~g-~~~~~Aa~~A~~~hg~Ag~~aa~--g~~~~~a~dl~~~lp~~~~~ 499 (502)
T 3rss_A 454 AQG-LSPLEASTVSVYLHGFAAELFEQ--DERGLTASELLRLIPEAIRR 499 (502)
T ss_dssp HTT-CCHHHHHHHHHHHHHHHHHTCSS--CGGGCCHHHHHHHHHHHHHH
T ss_pred hCC-CCHHHHHHHHHHHHHHHHHHHhc--CCCCcCHHHHHHHHHHHHHH
Confidence 996 89999999999999999998866 45789999999999987654
No 8
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.94 E-value=1e-26 Score=198.58 Aligned_cols=187 Identities=14% Similarity=0.128 Sum_probs=139.3
Q ss_pred chhhhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHH-hccCCeEEcCCHHHHHH
Q 026308 23 EIPDFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLEL-VQLKPTVIRGNASEIIA 100 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~-~~~~~~vitPN~~E~~~ 100 (240)
.+.+++++.|++++|+|+. +++..+.+.++++..+ .++|+||||++......+ .++ ++..+++||||..|+++
T Consensus 118 ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~----~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 118 RLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKR----KPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHC----C-CCCSCSCEEEECCSCC-CT
T ss_pred HHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccC----hhhcCCCCCEEECCcHHHHHH
Confidence 3455667899999999986 4444455555554332 478999999883211100 012 33468999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHH-HHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDA-MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~-~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l 179 (240)
|+|.+. + +..++. .+++++|.+ +++|++||..+++++++.+|..+.+.+.+ +++|+||+|+|+|++++
T Consensus 193 L~g~~~------~--~~~~d~~~~aa~~l~~--g~~VvlkG~~~~i~~~~~~~~~~~~~~~~-~t~GtGD~Lag~iaa~l 261 (311)
T 3bgk_A 193 LSGLTI------P--EQIEAATQTALAHFPK--ETILVAKSHQTKIYQGQKIGHIQVGGPYQ-ATGGMGDTLAGMIAGFV 261 (311)
T ss_dssp TTCCCS------T--TCCHHHHHHHHTTSCT--TCEEEECSSSCEEEETTEEEEECCCCGGG-CSTTHHHHHHHHHHHHH
T ss_pred HhCCCC------C--cchhhHHHHHHHHHhc--CCEEEEeCCCeEEEECCEEEEECCCCCCC-CCCcHHHHHHHHHHHHH
Confidence 999765 1 122466 778888876 67789999888888755566655444444 47999999999999999
Q ss_pred hc-CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHH
Q 026308 180 AV-DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQA 228 (240)
Q Consensus 180 a~-~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~ 228 (240)
++ + .++.+|+++|+++++.+++.+.++ |+++++.+++|.|+.++++
T Consensus 262 A~~g-~~~~eA~~~A~~~~~~ag~~a~~~--g~~~~a~dl~~~l~~~~~~ 308 (311)
T 3bgk_A 262 AQFH-TDRFEVAAAAVFLHSYIADQLSKE--AYVVLPTRISAEITRVMKE 308 (311)
T ss_dssp HHCC-SCHHHHHHHHHHHHHHHHHHHHTT--CSSCCHHHHHHHHHHHHHH
T ss_pred HccC-CCHHHHHHHHHHHHHHHHHHHHhh--CCCCCHHHHHHHHHHHHHH
Confidence 99 8 799999999999999999988875 6899999999999987653
No 9
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.94 E-value=3.5e-26 Score=195.17 Aligned_cols=186 Identities=14% Similarity=0.117 Sum_probs=137.0
Q ss_pred chhhhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHHHHH
Q 026308 23 EIPDFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIA 100 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E~~~ 100 (240)
.+..+++++|++++|+|+. +.+..+.+..+++..+ .++|+||||++......+ .++++ ..++|||||..|+++
T Consensus 104 ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~----~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 104 LLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQG----NFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHT----TCCCSSGGGEEEECCHHHHHH
T ss_pred HHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccc----hhhhcCCCCEEEcCCHHHHHH
Confidence 3455667899999999986 4434455555544332 478999999883211100 01222 357999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHH-HHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDA-MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~-~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l 179 (240)
|+|.+. + +..++. .++++++ +++|++||..+++++++.+|..+.+.+.+. ++|+||+|+|+|++++
T Consensus 179 L~g~~~------~--~~~~~~a~~aA~~l----g~~VvlKG~~~vi~~~~~~~~~~~g~~~~~-t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 179 LSHLPI------E--QQTLANNQRQQAKL----GSTIVLKSHRTTIFHAGEPFQNTGGNPGMA-TGGTGDTLAGIIAGFL 245 (310)
T ss_dssp HHCCCG------G--GCCHHHHHHHHHHH----TSEEEECSTTCEEECSSSCEECCCCCGGGC-STTHHHHHHHHHHHHH
T ss_pred HhCCCC------C--cccchHHHHHHHHh----CcEEEEeCCceEEEECCEEEEECCCCCCCC-CCChHHHHHHHHHHHH
Confidence 999764 1 112344 5666665 678999999898887444665554444444 6999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHH
Q 026308 180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAA 229 (240)
Q Consensus 180 a~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~ 229 (240)
+++ .++.+|++.|+++++.+++.+.++ |+++++.++++.|+.++++.
T Consensus 246 A~g-~~~~eA~~~A~~~~~~ag~~a~~~--g~~~~a~dl~~~l~~~~~~~ 292 (310)
T 2r3b_A 246 AQF-KPTIETIAGAVYLHSLIGDDLAKT--DYVVLPTKISQALPTYMKKY 292 (310)
T ss_dssp HHS-CSSHHHHHHHHHHHHHHHHHHTTT--CSSCCHHHHHHHHHHHHHHH
T ss_pred HcC-CCHHHHHHHHHHHHHHHHHHHHhh--CCCCCHHHHHHHHHHHHHHH
Confidence 996 899999999999999999988875 68999999999999887654
No 10
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.91 E-value=3.1e-24 Score=192.18 Aligned_cols=179 Identities=16% Similarity=0.172 Sum_probs=135.7
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG 107 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~ 107 (240)
.+++|++++|||+-.+.. + +..+++ .+ |+|+|++++.... ..+.+ ..++|||||..|+++|+|...
T Consensus 290 ~~~~~a~~iGPGlG~~~~-~-l~~~l~----~~-p~VlDADaL~~~~-----~~~~~-~~~~VlTPh~~E~~rL~g~~~- 355 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPK-D-FNRWLE----LA-PCVLDAGVFYHKE-----ILQAL-EKEAVLTPHPKEFLSLLNLVG- 355 (475)
T ss_dssp CSSCSEEEECTTCSSCCT-T-HHHHHH----HS-CEEEEGGGGGSGG-----GGTTT-TSSEEEECCHHHHHHHHHHTS-
T ss_pred ccCCCEEEEcCCCCCCHH-H-HHHHHh----cC-CEEEECcccCCch-----hhhcc-CCCEEECCCHHHHHHHhCCcc-
Confidence 368899999999843333 3 444442 35 9999999964211 11222 256999999999999998621
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCH
Q 026308 108 PTKGVDSSHESMDAMEAARCLAEAS-GAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHA 186 (240)
Q Consensus 108 ~~~~~~~~~~~~~~~~~a~~l~~~~-~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~ 186 (240)
.+++..+..++..+++++|++++ +++||+||..+++++++.++.++.+.+.+.+ +|+||+|+|+|+++++++ .++
T Consensus 356 --~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~vI~~~~~~~~~~~g~~~mat-~GtGdvLsg~Iaa~lA~g-~~~ 431 (475)
T 3k5w_A 356 --INISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAK-AGSGDVLAGLILSLLSQN-YTP 431 (475)
T ss_dssp --CCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEEEEETTEEEEECCCCGGGCS-TTHHHHHHHHHHHHHHTT-CCH
T ss_pred --CCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCEEECCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHHcC-CCH
Confidence 01111122345667889999999 7889999999999887788888878888875 999999999999999996 899
Q ss_pred HHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308 187 FEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227 (240)
Q Consensus 187 ~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~ 227 (240)
.+|+..|+++|+.|++.+ + .++|+++.|+++.|+++.-
T Consensus 432 ~~Aa~~a~~lhg~ag~~a-~--~~~~~~a~dl~~~l~~~~~ 469 (475)
T 3k5w_A 432 LDAAINASLAHALASLEF-K--NNYALTPLDLIEKIKQLEG 469 (475)
T ss_dssp HHHHHHHHHHHHHGGGGC-S--STTCCCHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHHHHh-c--cCCCcCHHHHHHHhhhhhc
Confidence 999999999999999987 3 4679999999999998753
No 11
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.89 E-value=9.9e-22 Score=166.68 Aligned_cols=182 Identities=16% Similarity=0.128 Sum_probs=133.4
Q ss_pred ccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcc-cc---hH---HHHHHhccCCeEEcCCHHHHHHH
Q 026308 30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASG-FR---LN---ACLELVQLKPTVIRGNASEIIAL 101 (240)
Q Consensus 30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~-~~---~~---~~~~~~~~~~~vitPN~~E~~~L 101 (240)
..|++. .|++ +.+.++.+.++++.+++.++++|+||++.+.+. ++ .+ ..++++ +.+++||||..|++.|
T Consensus 77 ~~~aik--~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll-~~adiitpN~~Ea~~L 153 (291)
T 3mbh_A 77 QFDAIY--TGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLI-TKADVITPNLTELFYL 153 (291)
T ss_dssp CCSEEE--ECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHG-GGCSEECCBHHHHHHH
T ss_pred ccCEEE--ECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHh-ccCCEEeCCHHHHHHH
Confidence 345554 6887 667777777777777666799999999986543 22 22 134555 4899999999999999
Q ss_pred HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------c-EEEcC--cEEEEEecCCccCCCccchhhH
Q 026308 102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------D-IVTDG--RRVVGAHNGVPMMQKITATGCS 170 (240)
Q Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~-~i~~~--~~~~~~~~~~~~~~~~~GaGD~ 170 (240)
+|.++. ...+.+++.+++++|.+++...|++||.. + +++++ ++.+.++.+.. ..+++|+||+
T Consensus 154 ~g~~~~------~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~-~~dt~GaGD~ 226 (291)
T 3mbh_A 154 LDEPYK------ADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL-PAHYPGTGDT 226 (291)
T ss_dssp HTCCCC------SCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC-GGGSTTHHHH
T ss_pred hCCCCC------CCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc-CCCCCChHHH
Confidence 998640 01256788889999998887889999532 2 45554 35656665443 3678999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhC--CCccccHHHHHHHH
Q 026308 171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCL 222 (240)
Q Consensus 171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~--~~~g~~~~~~~~~l 222 (240)
|+|++++++++| .++.+|+++|..+...+++.+.... ...|...++.+..|
T Consensus 227 f~aai~a~l~~g-~~l~~A~~~A~~~~~~ai~~~~~~~~~~~~gv~~e~~L~~l 279 (291)
T 3mbh_A 227 FTSVITGSLMQG-DSLPMALDRATQFILQGIRATFGYEYDNREGILLEKVLHNL 279 (291)
T ss_dssp HHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHTTTTSCCCGGGCSCHHHHGGGT
T ss_pred HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHhcCCCcccCCcHHHHHHHH
Confidence 999999999996 8999999999999999998876631 23566666655554
No 12
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.88 E-value=4.3e-21 Score=160.85 Aligned_cols=170 Identities=22% Similarity=0.198 Sum_probs=127.5
Q ss_pred ccCcEEEecCCCCCChHHHHHHHHHHHHhcCC-CEEEcccccCCcccc---h---HHHH-HHhccCCeEEcCCHHHHHHH
Q 026308 30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFR---L---NACL-ELVQLKPTVIRGNASEIIAL 101 (240)
Q Consensus 30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~-~vvlDp~~~~~~~~~---~---~~~~-~~~~~~~~vitPN~~E~~~L 101 (240)
+.|++++ |++.. .+.+..+++.+++.+. |+|+||++......+ . +..+ +++ ..+++||||..|++.|
T Consensus 74 ~~d~v~~--G~l~~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll-~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKT--GMLPT--VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLA-PLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEE--CCCCS--HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTG-GGCSEECCBHHHHHHH
T ss_pred CCCEEEE--CCCCC--HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhH-hhCcEEcCCHHHHHHH
Confidence 5677776 45433 3667788888888888 699999876544322 1 1222 444 3789999999999999
Q ss_pred HcCC-CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhhHHH
Q 026308 102 SRAS-VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGCSVT 172 (240)
Q Consensus 102 ~g~~-~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD~la 172 (240)
+|.+ . .+.+++.+++++|.+.+...||+||+. ++++++++.+.++.+.....+++|+||+|+
T Consensus 149 ~g~~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~ 219 (271)
T 2i5b_A 149 SGMDEL---------KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFS 219 (271)
T ss_dssp HTCCCC---------CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHH
T ss_pred hCCCCC---------CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHH
Confidence 9976 4 345678888999988777789999443 367776666666655555567899999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCcccc
Q 026308 173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASL 214 (240)
Q Consensus 173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~ 214 (240)
|+++++++++ .++.+|+++|+.++..+++.......|.|..
T Consensus 220 a~~~~~l~~g-~~~~~A~~~A~~~~~~~~~~~~~~g~g~~~~ 260 (271)
T 2i5b_A 220 AAVTAELAKG-AEVKEAIYAAKEFITAAIKESFPLNQYVGPT 260 (271)
T ss_dssp HHHHHHHHTT-CCHHHHHHHHHHHHHHHHHTCCCSSSSCCBC
T ss_pred HHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Confidence 9999999996 8999999999999999998776543455543
No 13
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.88 E-value=1.5e-21 Score=165.35 Aligned_cols=166 Identities=15% Similarity=0.063 Sum_probs=127.8
Q ss_pred cccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCccc---chH---HHHH-HhccCCeEEcCCHHHH
Q 026308 29 PHVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGF---RLN---ACLE-LVQLKPTVIRGNASEI 98 (240)
Q Consensus 29 ~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~---~~~---~~~~-~~~~~~~vitPN~~E~ 98 (240)
.+.|+++ .|++ +....+.+.++++.+++.+ .++|+||++.+.++. ..+ ..++ ++ ..+++||||..|+
T Consensus 76 ~~~d~v~--~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll-~~~diitpN~~E~ 152 (289)
T 3pzs_A 76 KDCDAVL--SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEAL-PASDMIAPNLLEL 152 (289)
T ss_dssp GGCCEEE--ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHH-HHCSEECCCHHHH
T ss_pred cCCCEEE--ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhh-ccCCEEeCCHHHH
Confidence 3677754 5775 5567788888888888766 789999999876542 111 1222 34 4799999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-C-cc--------EEEcCcEEEEEecCCccC--CCccc
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-A-VD--------IVTDGRRVVGAHNGVPMM--QKITA 166 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-~-~~--------~i~~~~~~~~~~~~~~~~--~~~~G 166 (240)
+.|+|.++ .+.+++.+++++|.+++...|++|| . .+ +++++++.+.++.+.... .+++|
T Consensus 153 ~~L~g~~~---------~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~G 223 (289)
T 3pzs_A 153 EQLSGERV---------ENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVG 223 (289)
T ss_dssp HHHHTSCC---------CSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTT
T ss_pred HHHhCCCC---------CCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCc
Confidence 99999876 4567888999999888888899995 3 22 566767777666444343 56899
Q ss_pred hhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308 167 TGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM 207 (240)
Q Consensus 167 aGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~ 207 (240)
+||+|+|++++++++| .++.+|+++|+.+...+++.+.+.
T Consensus 224 aGD~f~a~~~~~l~~g-~~~~~A~~~A~~~~~~~i~~t~~~ 263 (289)
T 3pzs_A 224 VGDLTSGLLLVNLLKG-EPLDKALEHVTAAVYEVMLKTQEM 263 (289)
T ss_dssp HHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999996 899999999999999998877664
No 14
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.86 E-value=5.9e-21 Score=161.21 Aligned_cols=180 Identities=16% Similarity=0.128 Sum_probs=128.2
Q ss_pred ccCcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCcc-c---chHH---HHHHhccCCeEEcCCHHHHHHH
Q 026308 30 HVRALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASG-F---RLNA---CLELVQLKPTVIRGNASEIIAL 101 (240)
Q Consensus 30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~-~---~~~~---~~~~~~~~~~vitPN~~E~~~L 101 (240)
..|++. .|++.+. +.++.+.+.+++. +.++|+||++.+.++ + ..+. .++++ +.+++||||..|++.|
T Consensus 74 ~~daik--~G~l~s~--~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll-~~adiitpN~~Ea~~L 148 (282)
T 3h74_A 74 HFDQAL--IGYVGSV--ALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLI-QQADVILPNTTEAALL 148 (282)
T ss_dssp CCSEEE--ECCCCSH--HHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHG-GGCSEECCCHHHHHHH
T ss_pred ccCEEE--ECCCCCH--HHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHh-ccCCEECCCHHHHHHH
Confidence 455555 5786332 3345555555554 588999999886443 2 2222 34555 4899999999999999
Q ss_pred HcCCCCCCcCCCCCCChHHHHHHHHHHHH-hcC-CEEEEecC-----cc-EEEc-CcEEEEEecCCccCCCccchhhHHH
Q 026308 102 SRASVGPTKGVDSSHESMDAMEAARCLAE-ASG-AIVAVSGA-----VD-IVTD-GRRVVGAHNGVPMMQKITATGCSVT 172 (240)
Q Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~-~~~-~~VvitG~-----~~-~i~~-~~~~~~~~~~~~~~~~~~GaGD~la 172 (240)
+|.++ .+.+++.+++++|.+ .+. ..|++||. .+ ++++ +++.+.++.+.. ..+++|+||+|+
T Consensus 149 ~g~~~---------~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v-~~dt~GaGD~fs 218 (282)
T 3h74_A 149 TGAPY---------QVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL-PGHYNGTGDTLA 218 (282)
T ss_dssp HTCCC---------CSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC-SSCCTTHHHHHH
T ss_pred hCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC-CCCCcCHHHHHH
Confidence 99875 234567788999988 444 57999963 34 3453 555666654433 367899999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCC---CccccHHHHHHHHhcC
Q 026308 173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAK---GPASLRMHMIDCLHGL 225 (240)
Q Consensus 173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~---~~g~~~~~~~~~l~~~ 225 (240)
|++++++++| .++.+|+++|..+...+++.+..... ..|...++.+..|..+
T Consensus 219 aai~a~l~~g-~~l~~A~~~A~~~~~~ai~~~~~~~~g~~~~Gv~~e~~L~~l~~~ 273 (282)
T 3h74_A 219 AVIAGLLGRG-YPLAPTLARANQWLNMAVAETIAQNRTDDRQGVALGDLLQAILAL 273 (282)
T ss_dssp HHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHTTCSCTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHhhCCCCchhcCCcHHHHHHHHHhh
Confidence 9999999996 89999999999999999988776422 4577777777776543
No 15
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.86 E-value=1.1e-20 Score=157.09 Aligned_cols=168 Identities=26% Similarity=0.297 Sum_probs=120.6
Q ss_pred cCcEEEecCCCCCChHHHHHHHHHHHHhcC-CCEEEcccccCCcccch---H---HH-HHHhccCCeEEcCCHHHHHHHH
Q 026308 31 VRALYVNVGTLSANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGFRL---N---AC-LELVQLKPTVIRGNASEIIALS 102 (240)
Q Consensus 31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~~~---~---~~-~~~~~~~~~vitPN~~E~~~L~ 102 (240)
.+++.+ |++.+ .+.+..+++.+++.+ +++++||++....+.+. . .. .+++ ..+++||||..|++.|+
T Consensus 71 ~~~v~~--G~l~~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll-~~~dil~pN~~E~~~L~ 145 (258)
T 1ub0_A 71 LHAAKT--GALGD--AAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLF-PLADLVTPNRLEAEALL 145 (258)
T ss_dssp CSEEEE--CCCCS--HHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTG-GGCSEECCBHHHHHHHH
T ss_pred CCEEEE--CCcCC--HHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhc-ccCeEEeCCHHHHHHHh
Confidence 566665 55443 355677888888888 89999998754322211 1 11 2344 36899999999999999
Q ss_pred cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc------cEEEcCcEEEEEecCCccCCCccchhhHHHHHH
Q 026308 103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV------DIVTDGRRVVGAHNGVPMMQKITATGCSVTALI 175 (240)
Q Consensus 103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~i 175 (240)
|.+. .+.+++.+++++|.+.+...||+| |.. ++++++++.++++.......+++|+||+|+|++
T Consensus 146 g~~~---------~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~ 216 (258)
T 1ub0_A 146 GRPI---------RTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAI 216 (258)
T ss_dssp CSCC---------CSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHH
T ss_pred CCCC---------CCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHH
Confidence 9765 355678888899988555568899 543 466777777777655555567899999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccc
Q 026308 176 AAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPAS 213 (240)
Q Consensus 176 aa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~ 213 (240)
+++++++ .++.+|+++|+.+...+++.+.+...|+|.
T Consensus 217 ~~~l~~g-~~~~~a~~~a~~~~~~~~~~~~~~~~g~~~ 253 (258)
T 1ub0_A 217 AALLAKG-RPLAEAVAEAKAYLTRALKTAPSLGHGHGP 253 (258)
T ss_dssp HHHHHTT-CCHHHHHHHHHHHHHHHHHTCCCCSSSSCC
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHHHHHHhhccCCCCCC
Confidence 9999996 899999999999988888876654345554
No 16
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1e-20 Score=173.23 Aligned_cols=170 Identities=15% Similarity=0.167 Sum_probs=121.2
Q ss_pred ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc---hHH---HH-HHhccCCeEEcCCHHHHHHHH
Q 026308 30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR---LNA---CL-ELVQLKPTVIRGNASEIIALS 102 (240)
Q Consensus 30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~---~~~---~~-~~~~~~~~vitPN~~E~~~L~ 102 (240)
+.|+|.+|++ +.+.++.+.++++..++.+.|+|+||++...++.+ .+. .+ +++ +.+++||||..|++.|+
T Consensus 91 ~~daIkiG~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll-~~a~iitPN~~Ea~~L~ 167 (550)
T 3rm5_A 91 KCNVIKTGML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVA-PFADILTPNIPECYKLL 167 (550)
T ss_dssp CCSEEEECSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTG-GGCSEECCBHHHHHHHH
T ss_pred CCCEEEECCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhh-CcceEEecCHHHHHHHh
Confidence 5677776544 55566666666666655688999999986543321 111 22 344 47999999999999999
Q ss_pred cCCCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEecCc------------cEEE--cCcEEEEEecCCccCCCccch
Q 026308 103 RASVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVSGAV------------DIVT--DGRRVVGAHNGVPMMQKITAT 167 (240)
Q Consensus 103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~VvitG~~------------~~i~--~~~~~~~~~~~~~~~~~~~Ga 167 (240)
|.+.. ..+.+++.+++++|.++++ ..||+||+. ++++ ++++.+.++.+.....+++|+
T Consensus 168 g~~~~-------i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~Gt 240 (550)
T 3rm5_A 168 GEERK-------VNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGT 240 (550)
T ss_dssp SCCCC-------CCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTH
T ss_pred CCCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcCh
Confidence 97420 0345788899999999988 589999642 1455 456666666444434578999
Q ss_pred hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCC
Q 026308 168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKG 210 (240)
Q Consensus 168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~ 210 (240)
||+|+|+|++++++| .++.+|++.|+.+...+++.+.....|
T Consensus 241 GD~fsaaiaa~La~G-~~l~eAv~~A~~~v~~ai~~~~~~g~g 282 (550)
T 3rm5_A 241 GCTLASAIASNLARG-YSLPQSVYGGIEYVQNAVAIGCDVTKE 282 (550)
T ss_dssp HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHCBCCBCT
T ss_pred hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999996 899999999999999998877654334
No 17
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.86 E-value=2.2e-20 Score=158.99 Aligned_cols=163 Identities=18% Similarity=0.125 Sum_probs=118.4
Q ss_pred ccCcEEEecCCC-CCChHHHHHHHHHHHHhcC------CCEEEcccccCCcccch-----HHHHHHhccCCeEEcCCHHH
Q 026308 30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLG------KPWVLDPVAAGASGFRL-----NACLELVQLKPTVIRGNASE 97 (240)
Q Consensus 30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~------~~vvlDp~~~~~~~~~~-----~~~~~~~~~~~~vitPN~~E 97 (240)
++|+|. +|++ +.+.++.+.++++.+++.+ .++|+||++.+.+.... +..++++ +.+++||||..|
T Consensus 76 ~~daV~--tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll-~~adiitPN~~E 152 (300)
T 3zs7_A 76 NYRYIL--TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELV-PLADIVTPNYFE 152 (300)
T ss_dssp GCSEEE--ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHG-GGCSEECCCHHH
T ss_pred cCCEEE--ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHh-hhCCEecCCHHH
Confidence 567655 6886 6667777777777776654 78999999987632211 1234455 489999999999
Q ss_pred HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-Ccc-------EEEc-C------cEEEEEecCCccCC
Q 026308 98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-AVD-------IVTD-G------RRVVGAHNGVPMMQ 162 (240)
Q Consensus 98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-~~~-------~i~~-~------~~~~~~~~~~~~~~ 162 (240)
++.|+|.++ .+.+++.+++++|.+++...||+|| ..+ +++. + ++.+.++.+....
T Consensus 153 a~~L~g~~~---------~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~- 222 (300)
T 3zs7_A 153 ASLLSGVTV---------NDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG- 222 (300)
T ss_dssp HHHHHSSCC---------CSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-
T ss_pred HHHHhCCCC---------CCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-
Confidence 999999876 4677888999999988888899994 322 3433 3 4566666444333
Q ss_pred CccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308 163 KITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM 207 (240)
Q Consensus 163 ~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~ 207 (240)
+++|+||+|+|++++.+ .| .++.+|+++|..+...+++.+.+.
T Consensus 223 ~~~GtGD~fsaal~a~l-~g-~~~~~Av~~A~~~v~~~i~~t~~~ 265 (300)
T 3zs7_A 223 RYTGTGDVFAACLLAFS-HS-HPMDVAIGKSMAVLQELIIATRKE 265 (300)
T ss_dssp CBTTHHHHHHHHHHHHH-TT-SCHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCcCHHHHHHHHHHHHH-cC-CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999 75 899999999999999999877653
No 18
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.85 E-value=8.5e-20 Score=154.48 Aligned_cols=160 Identities=19% Similarity=0.127 Sum_probs=116.7
Q ss_pred cCcEEEecCCCCCChHHHHHHHHHHHHhcCCC-EEEcccccCCccc---ch---HHHHH-HhccCCeEEcCCHHHHHHHH
Q 026308 31 VRALYVNVGTLSANWLPSMKAAAQLASQLGKP-WVLDPVAAGASGF---RL---NACLE-LVQLKPTVIRGNASEIIALS 102 (240)
Q Consensus 31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~-vvlDp~~~~~~~~---~~---~~~~~-~~~~~~~vitPN~~E~~~L~ 102 (240)
+|++++| ++.+ .+.+..+++.+++.+.+ +|+||.+....+. .. +...+ ++ ..+++||||..|++.|+
T Consensus 95 ~~~v~~G--~l~~--~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll-~~~dil~pN~~Ea~~L~ 169 (288)
T 1jxh_A 95 IDTTKIG--MLAE--TDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLL-PQVSLITPNLPEAAALL 169 (288)
T ss_dssp CSEEEEC--CCCS--HHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTG-GGCSEEECBHHHHHHHH
T ss_pred CCEEEEC--CCCC--HHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHH-hhCcEEcCCHHHHHHHc
Confidence 6777754 4432 36678888889988985 9999987532211 11 11222 44 37899999999999999
Q ss_pred cC-CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308 103 RA-SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSVTAL 174 (240)
Q Consensus 103 g~-~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ 174 (240)
|. .. .+.+++.+++++|.+.+...||+|++. ++++++++.+.++.+.....+++|+||+|+|+
T Consensus 170 g~~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~ 240 (288)
T 1jxh_A 170 DAPHA---------RTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAA 240 (288)
T ss_dssp TCCCC---------CSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHH
T ss_pred CCCCC---------CCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHH
Confidence 97 54 456778888999988777789999442 56677666666665444455789999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 026308 175 IAAFVAVDPLHAFEATASALSVYGIAGEMGM 205 (240)
Q Consensus 175 iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~ 205 (240)
++++++++ .++.+|+++|+.+.+.+.+...
T Consensus 241 ~~a~l~~g-~~~~~A~~~A~a~a~~~v~~~~ 270 (288)
T 1jxh_A 241 LAALRPRH-RSWGETVNEAKAWLSAALAQAD 270 (288)
T ss_dssp HHHHGGGS-SSHHHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHcC-CCHHHHHHHHHHHHHHHHHhhc
Confidence 99999996 8999999999999998887664
No 19
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.83 E-value=1.6e-19 Score=152.14 Aligned_cols=166 Identities=14% Similarity=0.031 Sum_probs=119.6
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHh--cCCCEEEcccccCCc--cc-chHHH----HHHhccCCeEEcCCHHHH
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQ--LGKPWVLDPVAAGAS--GF-RLNAC----LELVQLKPTVIRGNASEI 98 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~--~~-~~~~~----~~~~~~~~~vitPN~~E~ 98 (240)
++.++++++|. +.+....+.+.++++.+++ .++++++||.+...+ .+ ..... .+++ ..+++||||..|+
T Consensus 86 ~~~~~~v~~G~-l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll-~~~dil~pN~~E~ 163 (283)
T 2ddm_A 86 LRQLRAVTTGY-MGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLL-PLAQGITPNIFEL 163 (283)
T ss_dssp CTTCCEEEECC-CSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTG-GGCSEECCBHHHH
T ss_pred cccCCEEEECC-cCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhh-hhceEecCCHHHH
Confidence 44678887642 3333445667778888877 689999999865421 11 11111 2244 3789999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc-------c-EEEcCcEEEEEecCCccCCCccchhh
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV-------D-IVTDGRRVVGAHNGVPMMQKITATGC 169 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~-------~-~i~~~~~~~~~~~~~~~~~~~~GaGD 169 (240)
+.|+|.+. .+.+++.+++++|.+.+...||+| |.. + +++++++.++++..... .+++|+||
T Consensus 164 ~~L~g~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNC---------RDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCC---------SSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHH
T ss_pred HHHhCCCC---------CCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHH
Confidence 99999765 455678888888887777789999 554 2 55666676666654443 56799999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308 170 SVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS 206 (240)
Q Consensus 170 ~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~ 206 (240)
+|+|+++++++++ .++.+|+++|+.+.+.+.+....
T Consensus 234 af~a~~~~~l~~g-~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 234 LFCAQLISGLLKG-KALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999996 89999999999999888876655
No 20
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.82 E-value=6.5e-19 Score=150.08 Aligned_cols=154 Identities=16% Similarity=0.121 Sum_probs=119.3
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccC-CeEEcCCHHHHHHHHcCCCC
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLK-PTVIRGNASEIIALSRASVG 107 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~-~~vitPN~~E~~~L~g~~~~ 107 (240)
...+++++...++.....+.+..+++.+++.++++++||.. ....+++... +++|+||..|++.|+|.+.
T Consensus 129 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~--------~~l~~~l~~~~~dil~~N~~E~~~l~g~~~- 199 (309)
T 3umo_A 129 ESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAALAIGNIELVKPNQKELSALVNREL- 199 (309)
T ss_dssp CTTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH--------HHHHHHTSSCCBSEECCBHHHHHHHHTSCC-
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc--------HHHHHHhccCCCeEEEeCHHHHHHHhCCCC-
Confidence 45678888633344445677889999999999999999975 2234555433 6999999999999999765
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308 108 PTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL 184 (240)
Q Consensus 108 ~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~ 184 (240)
.+.+++.+++++|.+++. ..|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.+.++ .
T Consensus 200 --------~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g-~ 270 (309)
T 3umo_A 200 --------TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A 270 (309)
T ss_dssp --------CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTT-C
T ss_pred --------CCHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcC-C
Confidence 345678888999998886 468888 7665 556666777777666666788999999999999999986 8
Q ss_pred CHHHHHHHHHHHHHHH
Q 026308 185 HAFEATASALSVYGIA 200 (240)
Q Consensus 185 ~~~~A~~~A~~~~~~a 200 (240)
++.+|+++|+.+++.+
T Consensus 271 ~~~~a~~~A~~~aa~~ 286 (309)
T 3umo_A 271 SLEEMVRFGVAAGSAA 286 (309)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999998865544
No 21
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.82 E-value=8.5e-19 Score=150.46 Aligned_cols=158 Identities=15% Similarity=0.042 Sum_probs=119.9
Q ss_pred hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHcC
Q 026308 27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g~ 104 (240)
.++.+|++++...++.....+.+..+++.+++.++++++||.+ ....+++. ..+++++||..|++.|+|.
T Consensus 126 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~--------~~~~~~l~~~~~~dil~~N~~E~~~l~g~ 197 (323)
T 2f02_A 126 LIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSG--------DSLRQVLQGPWKPYLIKPNLEELEGLLGQ 197 (323)
T ss_dssp HHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCT--------HHHHHHHHSSCCCSEECCBHHHHHHHHTC
T ss_pred hccCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhccCCCeEEecCHHHHHHHhCC
Confidence 4578999998633333223356678888899999999999985 12344554 4799999999999999997
Q ss_pred CCCCCcCCCCCC-Ch-HHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308 105 SVGPTKGVDSSH-ES-MDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180 (240)
Q Consensus 105 ~~~~~~~~~~~~-~~-~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la 180 (240)
+. . +. +++.+.+++|.+++...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+++.++
T Consensus 198 ~~---------~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~ 268 (323)
T 2f02_A 198 DF---------SENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLA 268 (323)
T ss_dssp CC---------CSSCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred CC---------CCCcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHH
Confidence 53 2 33 567777888877766678888 7655 4456677777776666667889999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 026308 181 VDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 181 ~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
++ .++.+|+++|+.+++.+..
T Consensus 269 ~g-~~~~~a~~~A~~~aa~~v~ 289 (323)
T 2f02_A 269 KD-APAAELLKWGMAAGMANAQ 289 (323)
T ss_dssp TT-CCHHHHHHHHHHHHHHHHH
T ss_pred cC-CCHHHHHHHHHHHHHHHHc
Confidence 86 8999999999987776554
No 22
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.82 E-value=8.3e-19 Score=149.15 Aligned_cols=155 Identities=22% Similarity=0.207 Sum_probs=118.2
Q ss_pred hcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308 28 TPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV 106 (240)
Q Consensus 28 ~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~ 106 (240)
++.+|++++. |+ +.....+.+..+++.+++.++++++||.+ ....++++..+++++||..|++.|+|...
T Consensus 123 ~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~~E~~~l~g~~~ 193 (306)
T 2jg5_A 123 TTSEDIVIVA-GSVPSSIPSDAYAQIAQITAQTGAKLVVDAEK--------ELAESVLPYHPLFIKPNKDELEVMFNTTV 193 (306)
T ss_dssp CCTTCEEEEE-SCCCTTSCTTHHHHHHHHHHHHCCEEEEECCH--------HHHHHHGGGCCSEECCBHHHHHHHTTSCC
T ss_pred ccCCCEEEEe-CCCCCCCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhcCCeEEecCHHHHHHHhCCCC
Confidence 4568888886 54 33222355678888899999999999985 12345554368999999999999999754
Q ss_pred CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308 107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL 184 (240)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~ 184 (240)
.+.+++.+++++|.+.+...|++| |..+ +++++++.++++.++....+++|+||+|+|.+++.++++ .
T Consensus 194 ---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g-~ 263 (306)
T 2jg5_A 194 ---------NSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASG-L 263 (306)
T ss_dssp ---------CSHHHHHHHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTT-C
T ss_pred ---------CCHHHHHHHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcC-C
Confidence 355677788888887666678889 7655 456667777777665556788999999999999999986 8
Q ss_pred CHHHHHHHHHHHHHHHH
Q 026308 185 HAFEATASALSVYGIAG 201 (240)
Q Consensus 185 ~~~~A~~~A~~~~~~a~ 201 (240)
++.+|+++|+.+++.+.
T Consensus 264 ~~~~a~~~A~a~aa~~v 280 (306)
T 2jg5_A 264 SIEKAFQQAVACGTATA 280 (306)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999998766554
No 23
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.81 E-value=1.7e-18 Score=149.11 Aligned_cols=158 Identities=16% Similarity=0.096 Sum_probs=120.2
Q ss_pred hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHcC
Q 026308 27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g~ 104 (240)
.++.+|++++...++.....+.+..+++.+++.++++++||.+ ...++++. ..+++++||..|++.|+|.
T Consensus 144 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~~~dil~~N~~E~~~l~g~ 215 (330)
T 2jg1_A 144 MMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSG--------ATLQTVLENPYKPTVIKPNISELYQLLNQ 215 (330)
T ss_dssp HGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCH--------HHHHHHHTSSSCCSEECCBHHHHHHHTTS
T ss_pred hcCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHHHHhccCCceEEEeCHHHHHHHhCC
Confidence 3578999998633332222355678888999999999999975 12345554 3799999999999999987
Q ss_pred CCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308 105 SVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181 (240)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~ 181 (240)
+. . +.+++.+++++|.+++...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.+
T Consensus 216 ~~---------~~~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~ 286 (330)
T 2jg1_A 216 PL---------DESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILN 286 (330)
T ss_dssp CC---------CCCHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CC---------CCCHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHc
Confidence 53 2 45677778888887766778899 7765 44566677777766666778899999999999988998
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 026308 182 DPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 182 ~~~~~~~A~~~A~~~~~~a~~ 202 (240)
+ .++.+|+++|+.+++.+.+
T Consensus 287 g-~~l~~al~~A~a~aa~~v~ 306 (330)
T 2jg1_A 287 H-ENDHDLLKKANTLGMLNAQ 306 (330)
T ss_dssp T-CCHHHHHHHHHHHHHHHHT
T ss_pred C-CCHHHHHHHHHHHHHHHhc
Confidence 6 8999999999987665543
No 24
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.81 E-value=6.1e-19 Score=150.26 Aligned_cols=156 Identities=22% Similarity=0.140 Sum_probs=120.8
Q ss_pred hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308 26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS 105 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~ 105 (240)
+.++.+|+++++.+.+ .+.+..+++.+++.++++++||.+.. .+ ..+++ ..+++|+||..|++.|+|.+
T Consensus 130 ~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~--~~----~~~ll-~~~dil~~N~~E~~~l~g~~ 198 (309)
T 1rkd_A 130 ERIANASALLMQLESP----LESVMAAAKIAHQNKTIVALNPAPAR--EL----PDELL-ALVDIITPNETEAEKLTGIR 198 (309)
T ss_dssp HHHHHCSEEEECSSSC----HHHHHHHHHHHHHTTCEEEECCCSCC--CC----CHHHH-TTCSEECCCHHHHHHHHSCC
T ss_pred HhcccCCEEEEeCCCC----HHHHHHHHHHHHHcCCEEEEECCccc--cc----hHHHH-hhCCEEEcCHHHHHHHhCCC
Confidence 4567899999864332 25667888889999999999998742 11 13455 48999999999999999976
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308 106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP 183 (240)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~ 183 (240)
. .+.+++.+.+++|.+.+...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+++.++++
T Consensus 199 ~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g- 268 (309)
T 1rkd_A 199 V---------ENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEE- 268 (309)
T ss_dssp C---------SSHHHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT-
T ss_pred C---------CCHHHHHHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcC-
Confidence 4 345677888888988776778888 7655 455667777777665556788999999999999999986
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 026308 184 LHAFEATASALSVYGIAGE 202 (240)
Q Consensus 184 ~~~~~A~~~A~~~~~~a~~ 202 (240)
.++.+|+++|+.+++.+..
T Consensus 269 ~~~~~a~~~a~~~aa~~~~ 287 (309)
T 1rkd_A 269 KPLPEAIRFAHAAAAIAVT 287 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHcC
Confidence 8999999999987665543
No 25
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.81 E-value=2.9e-18 Score=145.95 Aligned_cols=158 Identities=16% Similarity=0.096 Sum_probs=120.4
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG 107 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~ 107 (240)
++.+|++++...++.....+.+..+++.+++.++++++||.+ ....++++..+++++||..|++.|+|.+.
T Consensus 123 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~~E~~~l~g~~~- 193 (306)
T 2abq_A 123 LEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG--------EALHEVLAAKPSFIKPNHHELSELVSKPI- 193 (306)
T ss_dssp CCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH--------HHHHHHGGGCCSEECCBHHHHHHHHTSCC-
T ss_pred ccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCcEEecCHHHHHHHhCCCC-
Confidence 467899888633333222355678888899999999999975 12345553379999999999999999754
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCC
Q 026308 108 PTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLH 185 (240)
Q Consensus 108 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~ 185 (240)
.+.+++.+.+++|.+++...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.++ .+
T Consensus 194 --------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g-~~ 264 (306)
T 2abq_A 194 --------ASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEG-KS 264 (306)
T ss_dssp --------CSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTT-CC
T ss_pred --------CCHHHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcC-CC
Confidence 355677788888888776778888 7655 445666777777655556788999999999999999986 89
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 026308 186 AFEATASALSVYGIAGEM 203 (240)
Q Consensus 186 ~~~A~~~A~~~~~~a~~~ 203 (240)
+.+|+++|+.+++.+...
T Consensus 265 ~~~a~~~A~a~aa~~v~~ 282 (306)
T 2abq_A 265 LEDAVPFAVAAGSATAFS 282 (306)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999887766553
No 26
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.81 E-value=3.8e-19 Score=151.10 Aligned_cols=155 Identities=15% Similarity=0.087 Sum_probs=120.9
Q ss_pred chhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHH
Q 026308 23 EIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALS 102 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~ 102 (240)
+..+.++.+|+++++.+.+ .+.+..+++.+++.++++++||.+.. ....+++ .++++++||..|++.|+
T Consensus 126 ~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll-~~~dil~~N~~E~~~l~ 194 (304)
T 3ry7_A 126 NAKDAIINADFVVAQLEVP----IPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELL-SLIDIIVPNETEAELLS 194 (304)
T ss_dssp TTHHHHHTCSEEEEETTSC----HHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHH-TTCSEECCBHHHHHHHH
T ss_pred HHHHHhccCCEEEEcCCCC----HHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHH-HhCCEEecCHHHHHHHh
Confidence 3345678899999974432 46678888999999999999997631 1123555 48999999999999999
Q ss_pred cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308 103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180 (240)
Q Consensus 103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la 180 (240)
|.+. .+.+++.+.+++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.+.
T Consensus 195 g~~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~ 265 (304)
T 3ry7_A 195 GIKV---------TNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLN 265 (304)
T ss_dssp SCCC---------CSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCC
T ss_pred CCCC---------CChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHH
Confidence 9865 456778888999987777778889 6655 4566677788876666667889999999999998888
Q ss_pred cCC-CCHHHHHHHHHHHHH
Q 026308 181 VDP-LHAFEATASALSVYG 198 (240)
Q Consensus 181 ~~~-~~~~~A~~~A~~~~~ 198 (240)
+ + .++.+|+++|+.+++
T Consensus 266 ~-g~~~~~~a~~~A~~~aa 283 (304)
T 3ry7_A 266 K-SQDNLADAIDFGNKASS 283 (304)
T ss_dssp T-TCTTHHHHHHHHHHHHH
T ss_pred c-CCCCHHHHHHHHHHHHH
Confidence 8 5 699999999887644
No 27
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.80 E-value=1.9e-18 Score=147.23 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=116.9
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCC-eEEcCCHHHHHHHHcCCC
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRASV 106 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~-~vitPN~~E~~~L~g~~~ 106 (240)
++. |++++...++.....+.+..+++.+++.++++++||.+. ...+.+...+ ++++||..|++.|+|.+.
T Consensus 129 ~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3cqd_A 129 ESG-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp CTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHH--------HHHHHTTTCCBSEECCBHHHHHHHHTSCC
T ss_pred hcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChH--------HHHHHHHhCCCEEEeeCHHHHHHHhCCCC
Confidence 456 888886333433445677888999999999999999851 1233343478 999999999999999754
Q ss_pred CCCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308 107 GPTKGVDSSHESMDAMEAARCLAEAS-GAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP 183 (240)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~a~~l~~~~-~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~ 183 (240)
.+.+++.+++++|.+.+ ...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.++
T Consensus 200 ---------~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g- 269 (309)
T 3cqd_A 200 ---------TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN- 269 (309)
T ss_dssp ---------CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTT-
T ss_pred ---------CCHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcC-
Confidence 34456778888888876 5568888 7655 445666677777655556788999999999999889986
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 026308 184 LHAFEATASALSVYGIAG 201 (240)
Q Consensus 184 ~~~~~A~~~A~~~~~~a~ 201 (240)
.++.+|+++|+.+++.+.
T Consensus 270 ~~~~~a~~~A~~~aa~~~ 287 (309)
T 3cqd_A 270 ASLEEMVRFGVAAGSAAT 287 (309)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 899999999998766543
No 28
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.79 E-value=2.8e-18 Score=146.90 Aligned_cols=165 Identities=16% Similarity=0.091 Sum_probs=119.8
Q ss_pred hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
+.++.+|++++. |+ +.....+.+..+++.+++.++++++||.. ....+.+...+++++||..|++.|+|.
T Consensus 129 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~dil~~N~~E~~~l~g~ 199 (320)
T 3ie7_A 129 KKVKKEDMVVIA-GSPPPHYTLSDFKELLRTVKATGAFLGCDNSG--------EYLNLAVEMGVDFIKPNEDEVIAILDE 199 (320)
T ss_dssp HHCCTTCEEEEE-SCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH--------HHHHHHHHHCCSEECCBTTGGGGGSCT
T ss_pred HHhcCCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCeEEeeCHHHHHHHhCC
Confidence 456789999995 55 34444577888999999999999999975 123344434899999999999999997
Q ss_pred CCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308 105 SVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181 (240)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~ 181 (240)
+. . +.+++. ++.++ ...|++| |..+ +++++++.++++.++..+.+++||||+|+|.+.+.+.+
T Consensus 200 ~~---------~~~~~~~~----~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~ 265 (320)
T 3ie7_A 200 KT---------NSLEENIR----TLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAM 265 (320)
T ss_dssp TC---------CCHHHHHH----HHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred Cc---------CCCHHHHH----HHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHc
Confidence 54 2 233333 33333 5568888 7665 45677778888876666678899999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHH
Q 026308 182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMI 219 (240)
Q Consensus 182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~ 219 (240)
| .++.+|+++|+.+++.+.+ . .|.+....+-+
T Consensus 266 g-~~~~~a~~~A~a~aa~~v~----~-~G~~~~~~~ev 297 (320)
T 3ie7_A 266 N-MPITETLKVATGCSASKVM----Q-QDSSSFDLEAA 297 (320)
T ss_dssp T-CCHHHHHHHHHHHHHHHHT----S-SSSSCCCHHHH
T ss_pred C-CCHHHHHHHHHHHHHHHHh----C-cCCCCCCHHHH
Confidence 6 8999999999987665544 2 45555544333
No 29
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.78 E-value=1.6e-17 Score=141.80 Aligned_cols=165 Identities=16% Similarity=0.140 Sum_probs=117.8
Q ss_pred hcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCC--EEEcccccCC----cc-c-c---hHHHHH-HhccCCeEEcCC
Q 026308 28 TPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKP--WVLDPVAAGA----SG-F-R---LNACLE-LVQLKPTVIRGN 94 (240)
Q Consensus 28 ~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~--vvlDp~~~~~----~~-~-~---~~~~~~-~~~~~~~vitPN 94 (240)
++.+|++++ |+. +....+.+.++++.+++.+.+ +++||.+... +. + . ....++ ++ +.+++||||
T Consensus 74 ~~~~~~v~~--G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll-~~~dil~pN 150 (312)
T 2yxt_A 74 MNKYDYVLT--GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVV-PLADIITPN 150 (312)
T ss_dssp CCCCSEEEE--CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTG-GGCSEECCC
T ss_pred CccCCEEEE--CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhh-hhCCEEcCC
Confidence 456788764 554 333455566788888887754 8999987543 11 1 1 012222 44 478999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc-------cEEE-------cC-----cEEEEE
Q 026308 95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV-------DIVT-------DG-----RRVVGA 154 (240)
Q Consensus 95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~-------~~i~-------~~-----~~~~~~ 154 (240)
..|++.|+|.+. .+.+++.+++++|.+.+...||+| |.. .+++ ++ ++.+++
T Consensus 151 ~~Ea~~L~g~~~---------~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
T 2yxt_A 151 QFEAELLSGRKI---------HSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRM 221 (312)
T ss_dssp HHHHHHHHSCCC---------CSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEE
T ss_pred HHHHHHHhCCCC---------CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEE
Confidence 999999999765 456778888899988777789999 542 2444 43 256666
Q ss_pred ecCCccCCCccchhhHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308 155 HNGVPMMQKITATGCSVTALIAAFVAV-DPLHAFEATASALSVYGIAGEMGMS 206 (240)
Q Consensus 155 ~~~~~~~~~~~GaGD~lag~iaa~la~-~~~~~~~A~~~A~~~~~~a~~~a~~ 206 (240)
+.++... +++||||+|+|++++.+++ + .++.+|+++|+.+.+.+.+....
T Consensus 222 ~~~~v~v-dttGAGDaf~a~~~~~l~~~g-~~l~~a~~~A~a~a~~~v~~~~~ 272 (312)
T 2yxt_A 222 DIRKVDA-VFVGTGDLFAAMLLAWTHKHP-NNLKVACEKTVSTLHHVLQRTIQ 272 (312)
T ss_dssp EEECCSS-CCSSHHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccCC-CCCCchHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 6444444 7899999999999999997 6 79999999999999888876655
No 30
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.78 E-value=3.9e-18 Score=146.85 Aligned_cols=156 Identities=18% Similarity=0.143 Sum_probs=118.7
Q ss_pred hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308 27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV 106 (240)
Q Consensus 27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~ 106 (240)
.++.+|+++++.. .+ .+.+..+++.+++.++++++||.+... ....+++ ..+++|+||..|++.|+|.+.
T Consensus 151 ~l~~~~~v~~~~~-~~---~~~~~~~~~~a~~~g~~v~~Dp~~~~~-----~~~~~ll-~~~dil~~N~~Ea~~l~g~~~ 220 (331)
T 2fv7_A 151 VISRAKVMVCQLE-IT---PATSLEALTMARRSGVKTLFNPAPAIA-----DLDPQFY-TLSDVFCCNESEAEILTGLTV 220 (331)
T ss_dssp HHHHCSEEEECSS-SC---HHHHHHHHHHHHHTTCEEEECCCSCCT-----TCCTHHH-HTCSEEEEEHHHHHHHHSSCC
T ss_pred hhccCCEEEEecC-CC---HHHHHHHHHHHHHcCCEEEEeCCcccc-----cchHHHH-hcCCEEEeCHHHHHHHhCCCC
Confidence 4678999998633 22 256678888899999999999987421 1112455 389999999999999999754
Q ss_pred CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCc--EEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308 107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGR--RVVGAHNGVPMMQKITATGCSVTALIAAFVAVD 182 (240)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~--~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~ 182 (240)
.+.+++.+.+++|.+++...|++| |..+. +++++ +.+.++..+..+.+++|+||+|+|.+++.+++
T Consensus 221 ---------~~~~~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~- 290 (331)
T 2fv7_A 221 ---------GSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAY- 290 (331)
T ss_dssp ---------CSHHHHHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHH-
T ss_pred ---------CChhHHHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHh-
Confidence 355677888888988777779999 76554 45555 56667765555678899999999999999988
Q ss_pred C--CCHHHHHHHHHHHHHHHHH
Q 026308 183 P--LHAFEATASALSVYGIAGE 202 (240)
Q Consensus 183 ~--~~~~~A~~~A~~~~~~a~~ 202 (240)
+ .++.+|+++|+.+++.+.+
T Consensus 291 g~~~~~~~a~~~A~~~aa~~v~ 312 (331)
T 2fv7_A 291 YPNLSLEDMLNRSNFIAAVSVQ 312 (331)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHhC
Confidence 5 6999999999988776554
No 31
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.78 E-value=1.8e-17 Score=142.50 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=118.4
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.+..+|+++++.. .+ +.+..+++ +++.++++++||.... ......+++ ..+++|+||..|++.|+|.
T Consensus 131 ~~~~~~~~~~~~~~~-~~----~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l-~~~dil~~N~~E~~~l~g~ 199 (328)
T 3kzh_A 131 REIFENAEYTVLDSD-NP----EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLI-KDFHTIKPNRHEAEILAGF 199 (328)
T ss_dssp HHHHHTCSEEEEESS-CH----HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTG-GGCSEECCBHHHHHHHHTS
T ss_pred HHhhccCCEEEEeCC-cH----HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHh-cCCcEEeCCHHHHHHHHCC
Confidence 345678999998743 32 45566666 7788999999997621 001112334 3799999999999999997
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD 182 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~ 182 (240)
+. .+.+++.+++++|.+.+...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+.+.+.++
T Consensus 200 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g 270 (328)
T 3kzh_A 200 PI---------TDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNK 270 (328)
T ss_dssp CC---------CSHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred CC---------CCHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcC
Confidence 65 456778888889988777778888 7665 445666677777666666788999999999999889986
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 026308 183 PLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 183 ~~~~~~A~~~A~~~~~~a~~ 202 (240)
.++.+|+++|+.+++.+.+
T Consensus 271 -~~~~~a~~~A~a~aa~~v~ 289 (328)
T 3kzh_A 271 -MPIEDIVKFAMTMSNITIS 289 (328)
T ss_dssp -CCHHHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHHHhc
Confidence 8999999999987766554
No 32
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.77 E-value=3.1e-18 Score=144.98 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=118.6
Q ss_pred hhhhcccCcEEEecCCC--CCChHHHHHHHHHHHHh-cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308 25 PDFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQ-LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIAL 101 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~-~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L 101 (240)
.+.++.+|+++++ ++. .+...+.+..+++.+++ .+.++++||.+.... +..+...++++ .+++|+||..|++.|
T Consensus 109 ~~~~~~~~~v~~g-~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~-~~~~~~~~~l~-~~dil~~N~~E~~~l 185 (296)
T 2qhp_A 109 KRLALNTRAVCFG-SLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDF-YTKEVLRESFK-RCNILKINDEELVTI 185 (296)
T ss_dssp HHHHHTEEEEEEC-SGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTC-CCHHHHHHHHH-HCSEEEEEHHHHHHH
T ss_pred HhhhcCCCEEEEC-ChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccc-cCHHHHHHHHH-HCCEEECCHHHHHHH
Confidence 3456788998875 332 22244567777777776 689999999764211 12233455664 789999999999999
Q ss_pred HcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308 102 SRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF 178 (240)
Q Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~ 178 (240)
+|... .+.+++.+++++|.++ +...|++| |..+ +++++++.++++..+....+++|+||+|+|.+++.
T Consensus 186 ~g~~~---------~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~ 256 (296)
T 2qhp_A 186 SRMFG---------YPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCAS 256 (296)
T ss_dssp HHHTT---------CTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred hcccC---------CCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHH
Confidence 98643 1223456678888876 45678888 7655 45666777777765555678899999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 179 VAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 179 la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
++++ .++.+|+++|+.+++.+..
T Consensus 257 l~~g-~~~~~a~~~a~~~aa~~v~ 279 (296)
T 2qhp_A 257 ILNG-KSVPEAHKLAVEVSAYVCT 279 (296)
T ss_dssp HHHT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHcC-CCHHHHHHHHHHHHHHHHc
Confidence 9986 8999999999987665543
No 33
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.77 E-value=9.7e-18 Score=144.28 Aligned_cols=161 Identities=16% Similarity=0.058 Sum_probs=119.2
Q ss_pred hhhcccCcEEEe---cCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCc--cc--chHHHHHHhccCCeEEcCCHHHH
Q 026308 26 DFTPHVRALYVN---VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS--GF--RLNACLELVQLKPTVIRGNASEI 98 (240)
Q Consensus 26 ~~~~~~d~vvi~---~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~--~~~~~~~~~~~~~~vitPN~~E~ 98 (240)
+.++.+|+++++ ++++++...+.+.++++.+++.++++++||...... .. .....++++ ..+++++||..|+
T Consensus 141 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~ 219 (328)
T 4e69_A 141 AAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGA-AVSDIALPSFEDE 219 (328)
T ss_dssp HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHH-TTCSEECCBHHHH
T ss_pred HHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHH-HhCCEEeCCHHHH
Confidence 567889999996 223344456777888899999999999999642110 00 012234555 4899999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCC-ccCCCccchhhHHHHHH
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGV-PMMQKITATGCSVTALI 175 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~-~~~~~~~GaGD~lag~i 175 (240)
+.|+|.+ ++.+++++|.+.+...||+| |..+ +++++++.+.++..+ ..+.+++||||+|+|.+
T Consensus 220 ~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 285 (328)
T 4e69_A 220 AAWFGDA--------------GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGL 285 (328)
T ss_dssp HHHHTCS--------------SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHH
T ss_pred HHHcCCC--------------CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHH
Confidence 9999852 24466777877766779999 6655 456667777777654 45678899999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 176 AAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 176 aa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
++.++++ .++.+|+++|+.+++.+.+
T Consensus 286 ~~~l~~g-~~l~~a~~~A~~~aa~~v~ 311 (328)
T 4e69_A 286 LDSVLAG-QPLETAIAAAAALAGQVVQ 311 (328)
T ss_dssp HHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCC-CCHHHHHHHHHHHHHHHHc
Confidence 9999996 8999999999987766544
No 34
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.77 E-value=1.4e-17 Score=144.74 Aligned_cols=155 Identities=14% Similarity=0.132 Sum_probs=118.1
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+|+++++ |+.... .+.+..+++.+++.++++++||.+.. + +++ ..+++|+||..|++.|+|
T Consensus 181 ~~~l~~~~~v~~~-g~~~~~-~~~~~~~~~~a~~~g~~v~~D~~~~~---~------~~l-~~~dil~pN~~Ea~~l~g- 247 (352)
T 4e84_A 181 DVLLPQHDVVLMS-DYAKGG-LTHVTTMIEKARAAGKAVLVDPKGDD---W------ARY-RGASLITPNRAELREVVG- 247 (352)
T ss_dssp HHHGGGCSEEEEE-CCSSSS-CSSHHHHHHHHHHTTCEEEEECCSSC---C------STT-TTCSEECCBHHHHHHHHC-
T ss_pred HHhcccCCEEEEe-CCCCCC-HHHHHHHHHHHHhcCCEEEEECCCcc---h------hhc-cCCcEEcCCHHHHHHHhC-
Confidence 4567889999996 432111 12257788889999999999997621 1 233 479999999999999999
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~ 181 (240)
.. .+.+++.+.+++|.++ +...||+| |..+ +++++++.++++..+..+.+++||||+|+|.+++.+++
T Consensus 248 ~~---------~~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~ 318 (352)
T 4e84_A 248 QW---------KSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGA 318 (352)
T ss_dssp CC---------SSHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CC---------CCHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHc
Confidence 43 3567888888998864 45678888 7765 45677778888876666778899999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 026308 182 DPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 182 ~~~~~~~A~~~A~~~~~~a~~ 202 (240)
| .++.+|+++|+.+++.+..
T Consensus 319 g-~~l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 319 G-VPLVDAVVLANRAAGIVVG 338 (352)
T ss_dssp T-CCHHHHHHHHHHHHHHHHT
T ss_pred C-CCHHHHHHHHHHHHHHHhc
Confidence 6 8999999999987665543
No 35
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.77 E-value=2.8e-18 Score=150.01 Aligned_cols=166 Identities=15% Similarity=0.095 Sum_probs=121.7
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+|+++++ |+......+.+.++++.+++.++++++||..........+...++++ .+++|+||..|++.|+|.
T Consensus 173 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~-~~dil~~N~~Ea~~l~g~ 250 (370)
T 3vas_A 173 WSLVEKAQVYYIA-GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS-YSNIVFGNESEAEAYGEV 250 (370)
T ss_dssp HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT-TCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEE-eeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh-hCCEEEcCHHHHHHHhcc
Confidence 3567889999996 55322234677888999999999999999742111011123455664 899999999999999996
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCcc-EEEc--CcEEEEEecCCc---cCCCccchhhH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVD-IVTD--GRRVVGAHNGVP---MMQKITATGCS 170 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~-~i~~--~~~~~~~~~~~~---~~~~~~GaGD~ 170 (240)
.. .+.+++.+++++|.+. +...||+| |..+ ++++ +++.++++.++. .+.+++||||+
T Consensus 251 ~~---------~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDa 321 (370)
T 3vas_A 251 HG---------LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDA 321 (370)
T ss_dssp TT---------CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHH
T ss_pred cC---------CCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHH
Confidence 53 2345777888888875 55668888 7765 4556 666677775543 56788999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 171 VTALIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
|+|.+.+.+++| .++.+|+++|+.+++.+..
T Consensus 322 F~ag~l~~l~~g-~~l~~a~~~A~aaAa~~v~ 352 (370)
T 3vas_A 322 FAAGFIADYIRG-KPMITSLHAAVKAAAYIIC 352 (370)
T ss_dssp HHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHc
Confidence 999999999986 8999999999987665544
No 36
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.77 E-value=1.7e-17 Score=143.81 Aligned_cols=172 Identities=10% Similarity=-0.008 Sum_probs=120.7
Q ss_pred hhhcccCcEEEecCCC--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhccCCeEEcCCHHHHH
Q 026308 26 DFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQLKPTVIRGNASEII 99 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~~~~vitPN~~E~~ 99 (240)
..++.+|+++++...+ ++...+.+..+++.+++.++++++||..... .+.. +...++++ .+++|+||..|++
T Consensus 134 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~-~~~~~~~~~~~~~ll~-~~dil~~N~~E~~ 211 (351)
T 2afb_A 134 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRAR-LWTKEEAQKVMIPFME-YVDVLIANEEDIE 211 (351)
T ss_dssp HHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTT-TCCHHHHHHHHHHHGG-GCSEEEECHHHHH
T ss_pred HhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchh-cCChHHHHHHHHHHHh-hCCEEEecHHHHH
Confidence 3467899999863322 3445577788889999999999999985321 1111 22345554 7899999999999
Q ss_pred HHHcCCCCCCcCCCC-CCChHHHHHHHHHHHHh-cCCEEEEe-cCcc---------EEEcCcEEEEEecCCccCCCccch
Q 026308 100 ALSRASVGPTKGVDS-SHESMDAMEAARCLAEA-SGAIVAVS-GAVD---------IVTDGRRVVGAHNGVPMMQKITAT 167 (240)
Q Consensus 100 ~L~g~~~~~~~~~~~-~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~---------~i~~~~~~~~~~~~~~~~~~~~Ga 167 (240)
.|+|... ..++.+. ..+.+++.+++++|.++ +...|++| |..+ +++++++.++++.++..+.+++|+
T Consensus 212 ~l~g~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGA 290 (351)
T 2afb_A 212 KVLGISV-EGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGA 290 (351)
T ss_dssp HHHCCCC-SCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTH
T ss_pred HHhCCCc-ccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCc
Confidence 9999753 1001110 01456677888888876 55578888 7642 556666777666544456688999
Q ss_pred hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308 168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~ 201 (240)
||+|+|.+++.+.++ .++.+|+++|+.+++.+.
T Consensus 291 GDaF~ag~~~~l~~g-~~l~~a~~~A~~~aa~~v 323 (351)
T 2afb_A 291 GDSFAGALIYGSLMG-FDSQKKAEFAAAASCLKH 323 (351)
T ss_dssp HHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence 999999999999986 899999999998766544
No 37
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.77 E-value=6.1e-18 Score=146.32 Aligned_cols=168 Identities=11% Similarity=-0.025 Sum_probs=121.4
Q ss_pred hhhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc-------hHHHHHHhccCCeEEcCC
Q 026308 25 PDFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR-------LNACLELVQLKPTVIRGN 94 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~-------~~~~~~~~~~~~~vitPN 94 (240)
.+.++.+|+++++ |+ + ++...+.+.++++.+++.++++++||...... +. .....+++ ..+++|+||
T Consensus 124 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~-~~~~~~~~~~~~~~~ll-~~~dil~~N 200 (346)
T 3ktn_A 124 EAFLAEVDMVHIC-GISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSL-NTANSALFMRQQYERIL-PYCDIVFGS 200 (346)
T ss_dssp HHHHTTCSEEEEC-THHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGG-CCHHHHHHHHHHHHHHG-GGCSEEECC
T ss_pred HHHhCCCCEEEEe-CccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHH-cCCccHHHHHHHHHHHH-HhCCEEEcc
Confidence 4567899999985 54 2 33344677888999999999999999632110 11 12344566 489999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCc--------cEEEcCcEEEEEecCCccCCCc
Q 026308 95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAV--------DIVTDGRRVVGAHNGVPMMQKI 164 (240)
Q Consensus 95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~--------~~i~~~~~~~~~~~~~~~~~~~ 164 (240)
..|++.|+|.+.. ....+.+++.+++++|.++ +...||+| |.. .+++++++.++++..+..+.++
T Consensus 201 ~~E~~~l~g~~~~-----~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdt 275 (346)
T 3ktn_A 201 RRDLVELLGFIPR-----EDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDR 275 (346)
T ss_dssp HHHHHHTSCCCCC-----TTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCC
T ss_pred HHHHHHHhCCCCC-----ccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCC
Confidence 9999999997520 0002346778888999886 45568888 764 3556666677766555556788
Q ss_pred cchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308 165 TATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 165 ~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~ 201 (240)
+||||+|+|.+.+.+.++ .++.+|+++|+.+++.+.
T Consensus 276 tGAGDaF~ag~~~~l~~g-~~l~~a~~~A~a~aa~~v 311 (346)
T 3ktn_A 276 IGAGDAYAAGILYGYSQN-WSLEKAVTFATVNGVLAH 311 (346)
T ss_dssp TTHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence 999999999999999986 899999999998766543
No 38
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.76 E-value=2.9e-17 Score=141.69 Aligned_cols=160 Identities=16% Similarity=0.102 Sum_probs=113.7
Q ss_pred hhhcccCcEEEecCC---CCCChHHHHHHHHHHHHhcCCCEEEcccccCCc--ccc--hHHHHHHhccCCeEEcCCHHHH
Q 026308 26 DFTPHVRALYVNVGT---LSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS--GFR--LNACLELVQLKPTVIRGNASEI 98 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~---~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~~--~~~~~~~~~~~~~vitPN~~E~ 98 (240)
+.++.+|++++. |+ .++...+.+..+++.+++.++++++||...... ... .....+++ ..+++|+||..|+
T Consensus 148 ~~l~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~pN~~Ea 225 (336)
T 4du5_A 148 AWLLSARHLHAT-GVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLA-TRADWVLPGMEEG 225 (336)
T ss_dssp HHHTTEEEEEEE-SSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHH-TTCSEECCBHHHH
T ss_pred hHhccCCEEEEc-CchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHH-HhCCEEECCHHHH
Confidence 456788888875 54 255556777888999999999999999732110 000 11234455 4899999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHH
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALI 175 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~i 175 (240)
+.|+|.+ +..++++.|.+++...|++| |..+ +++++++.++++..+.. +.+++|+||+|+|.+
T Consensus 226 ~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~ 291 (336)
T 4du5_A 226 RFLTGET--------------TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGV 291 (336)
T ss_dssp HHHHCCC--------------SHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHH
T ss_pred HHHhCCC--------------CHHHHHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHH
Confidence 9999852 23456777887777778999 6654 45667777777766555 678899999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 176 AAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 176 aa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
++.+++| .++.+|+++|+.+++.+..
T Consensus 292 ~~~l~~g-~~l~~a~~~A~~~aa~~v~ 317 (336)
T 4du5_A 292 ISALLDG-LGVPEAVKRGAWIGARAVQ 317 (336)
T ss_dssp HHHHHTT-CCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHHHhc
Confidence 9999986 8999999999987665543
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.76 E-value=9.5e-18 Score=144.43 Aligned_cols=155 Identities=13% Similarity=0.046 Sum_probs=116.7
Q ss_pred hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhcc--CCeEEcCCHHH-HHHHHc
Q 026308 27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQL--KPTVIRGNASE-IIALSR 103 (240)
Q Consensus 27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~--~~~vitPN~~E-~~~L~g 103 (240)
.++.+|+++++..++.....+.+..+++.+++.++++++||.+ ....+++.. .+++++||..| ++.|+|
T Consensus 143 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~~~dil~~N~~E~~~~l~g 214 (331)
T 2ajr_A 143 TLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTP--------RLLERIYEGPEFPNVVKPDLRGNHASFLG 214 (331)
T ss_dssp HHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCH--------HHHHHHHHSSCCCSEECCCCTTCCSCBTT
T ss_pred hcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCh--------HHHHHHHhcCCCCeEEEeCccchHHHHhC
Confidence 4578999998633333222356678888899999999999985 123445542 48999999999 999998
Q ss_pred CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEe-cCCccCCCccchhhHHHHHHHHHHh
Q 026308 104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAH-NGVPMMQKITATGCSVTALIAAFVA 180 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~-~~~~~~~~~~GaGD~lag~iaa~la 180 (240)
.+. .+.+++.+.+++|.++ ...|++| |..+ +++++++.++++ ..+..+.+++|+||+|+|.+.+.+.
T Consensus 215 ~~~---------~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~ 284 (331)
T 2ajr_A 215 VDL---------KTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFI 284 (331)
T ss_dssp BCC---------CSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHH
T ss_pred CCC---------CCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHH
Confidence 654 3456777888888888 6678888 7765 445666677777 6555567889999999999988888
Q ss_pred -cCCCCHHHHHHHHHHHHHHH
Q 026308 181 -VDPLHAFEATASALSVYGIA 200 (240)
Q Consensus 181 -~~~~~~~~A~~~A~~~~~~a 200 (240)
.+ .++.+|+++|+.+++.+
T Consensus 285 ~~g-~~~~~al~~A~a~aa~~ 304 (331)
T 2ajr_A 285 KHG-ANFLEMAKFGFASALAA 304 (331)
T ss_dssp HHC-SCHHHHHHHHHHHHHHH
T ss_pred HcC-CCHHHHHHHHHHHHHHH
Confidence 86 89999999998866544
No 40
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.76 E-value=4.5e-18 Score=147.06 Aligned_cols=165 Identities=18% Similarity=0.125 Sum_probs=117.2
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+|+++++ |+......+.+..+++.+++.++++++||.+........+...++++ .+++|+||..|++.|+|.
T Consensus 156 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~ 233 (345)
T 1bx4_A 156 WMLVEKARVCYIA-GFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP-YVDILFGNETEAATFARE 233 (345)
T ss_dssp HHHHHHCSEEEEE-GGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEE-EEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhc-cCCEEeCCHHHHHHHhcc
Confidence 4556789999985 44211224677888899999999999999752110000112344554 789999999999999986
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHH------hcCCEEEEe-cCcc-EEEcCcEEEEEecCCc---cCCCccchhhHHHH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAE------ASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP---MMQKITATGCSVTA 173 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~------~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag 173 (240)
.. .+.+++.+++++|.+ .+...|++| |..+ +++++++.++++..+. .+.+++|+||+|+|
T Consensus 234 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~a 304 (345)
T 1bx4_A 234 QG---------FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 304 (345)
T ss_dssp TT---------CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHH
T ss_pred cC---------CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHH
Confidence 42 122456677888877 355678888 7655 4456666777775443 46688999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308 174 LIAAFVAVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~ 201 (240)
.+++.++++ .++.+|+++|+.+++.+.
T Consensus 305 g~~~~l~~g-~~~~~a~~~A~~~aa~~v 331 (345)
T 1bx4_A 305 GFLSQLVSD-KPLTECIRAGHYAASIII 331 (345)
T ss_dssp HHHHHHTTT-CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CCHHHHHHHHHHHHHHHH
Confidence 999999986 899999999998766544
No 41
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.75 E-value=9.4e-18 Score=145.26 Aligned_cols=166 Identities=12% Similarity=0.038 Sum_probs=119.2
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.++++++. |+......+.+.++++.+++.++++++||..........+...++++ .+++++||..|++.|++.
T Consensus 157 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~-~~dil~~N~~Ea~~l~~~ 234 (347)
T 3otx_A 157 VRAMDESRIFYFS-GFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP-YTDIIVANRHEAKEFANM 234 (347)
T ss_dssp HHHHHHCSEEEEE-GGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEe-eeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh-hCCEEecCHHHHHHHhcc
Confidence 3567889999996 54222234677889999999999999999742111111123455664 899999999999999986
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHH------hcCCEEEEe-cCcc-EEEcCcEEEEEecCCc---cCCCccchhhHHHH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAE------ASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP---MMQKITATGCSVTA 173 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~------~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag 173 (240)
.. .+.+++.+++++|.+ .+...|++| |..+ +++++++.++++.++. .+.+++|+||+|+|
T Consensus 235 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a 305 (347)
T 3otx_A 235 MK---------WDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMG 305 (347)
T ss_dssp HT---------CCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHH
T ss_pred cC---------CCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHH
Confidence 32 122355667777774 445568888 8765 4566677777765443 56788999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 174 LIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
.+...+.++ .++.+|+++|+.+++.+.+
T Consensus 306 g~l~~l~~g-~~l~~a~~~a~~~aa~~v~ 333 (347)
T 3otx_A 306 GFLSAYAVG-KDLRRCCETGHYTAQEVIQ 333 (347)
T ss_dssp HHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence 999889986 8999999999987766544
No 42
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.75 E-value=2e-17 Score=141.61 Aligned_cols=163 Identities=15% Similarity=0.004 Sum_probs=116.7
Q ss_pred chhhhhcccCcEEEecCC----CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc----hHHHHHHhccCCeEEcCC
Q 026308 23 EIPDFTPHVRALYVNVGT----LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR----LNACLELVQLKPTVIRGN 94 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~----~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~----~~~~~~~~~~~~~vitPN 94 (240)
++.+.++.+|+++++ |+ +++...+.+..+++.+++.++++++||......-.. .....+++ ..+++++||
T Consensus 122 ~~~~~l~~~~~v~~~-g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~di~~~n 199 (319)
T 3lhx_A 122 AICEELANFDYLYLS-GISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQML-ECTDIAFLT 199 (319)
T ss_dssp HHHHHHTTCSEEEEE-HHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHH-TTCSEEEEE
T ss_pred hHHHHhcCCCEEEEc-CchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHH-hhCCcccCC
Confidence 344667899999996 32 234445677889999999999999999752210000 11234455 489999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEE-EEecC---CccCCCccchh
Q 026308 95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVV-GAHNG---VPMMQKITATG 168 (240)
Q Consensus 95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~-~~~~~---~~~~~~~~GaG 168 (240)
..|++.|+|.+ +..+++++|.+.+...||+| |..+ +++++++.+ .++.. ...+.+++|+|
T Consensus 200 ~~E~~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAG 265 (319)
T 3lhx_A 200 LDDEDALWGQQ--------------PVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAG 265 (319)
T ss_dssp HHHHHHHHCCC--------------CHHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHH
T ss_pred HHHHHHHhCCC--------------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCcc
Confidence 99999999852 23456777887777778888 7655 445554433 66643 33456889999
Q ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 169 CSVTALIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 169 D~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
|+|+|.+++.+.++ .++.+|+++|+.+++.+.+
T Consensus 266 Daf~a~~~~~l~~g-~~~~~a~~~A~~~aa~~v~ 298 (319)
T 3lhx_A 266 DSFSAGYLAVRLTG-GSAENAAKRGHLTASTVIQ 298 (319)
T ss_dssp HHHHHHHHHHHTTT-CCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC-CCHHHHHHHHHHHHHhhhc
Confidence 99999999999986 8999999999987665543
No 43
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.75 E-value=8e-18 Score=146.84 Aligned_cols=167 Identities=17% Similarity=0.114 Sum_probs=118.5
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+|+++++ |+......+.+.++++.+++.++++++||..........+...++++ .+++++||..|++.|+|.
T Consensus 171 ~~~~~~~~~v~i~-G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~-~~dil~~N~~Ea~~l~g~ 248 (365)
T 3loo_A 171 RAYLQGAQFFYVS-GFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP-YVDVLFGNETEAIALAKE 248 (365)
T ss_dssp HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEe-eeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH-hCCEEecCHHHHHHHhcc
Confidence 3567889999996 55322234667888899999999999999642111111223456664 899999999999999986
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHh------cCCEEEEe-cCcc-EEE--cCcEEEEEecCCc---cCCCccchhhHH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEA------SGAIVAVS-GAVD-IVT--DGRRVVGAHNGVP---MMQKITATGCSV 171 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~------~~~~Vvit-G~~~-~i~--~~~~~~~~~~~~~---~~~~~~GaGD~l 171 (240)
.. .+.+++.+++++|.+. +...||+| |..+ +++ ++++.+.++..+. .+.+++|+||+|
T Consensus 249 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF 319 (365)
T 3loo_A 249 FN---------YGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAF 319 (365)
T ss_dssp TT---------CCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHH
T ss_pred cC---------CCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHH
Confidence 43 2234566778888764 44568888 8765 456 6666677775543 567889999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Q 026308 172 TALIAAFVAVDPLHAFEATASALSVYGIAGEM 203 (240)
Q Consensus 172 ag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~ 203 (240)
.|.+.+.+.+| .++.+|+++|+.+++.+++.
T Consensus 320 ~agfl~~l~~g-~~l~~a~~~a~~~Aa~~v~~ 350 (365)
T 3loo_A 320 VGGFLAQLLQS-RTVDVCIKCGIWAAREIIQR 350 (365)
T ss_dssp HHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHHHHHHcC
Confidence 99998889986 89999999999887776653
No 44
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.74 E-value=5.6e-17 Score=142.28 Aligned_cols=178 Identities=11% Similarity=0.057 Sum_probs=119.7
Q ss_pred CchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHh-cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308 22 EEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQ-LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 22 ~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~-~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
+...+.++.+|+++++ |+......+.+..+++.+++ .++++++||.+........+...++++ .+++|+||..|++.
T Consensus 172 ~~~~~~l~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~-~~dil~pN~~Ea~~ 249 (383)
T 2abs_A 172 EDWTTFASGALIFYAT-AYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL-HTNILFGNEEEFAH 249 (383)
T ss_dssp TTHHHHTTTCCEEEEE-GGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH-TCSEEEEEHHHHHH
T ss_pred hhhHHHhhcCCEEEEe-eecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh-hCCEEeCCHHHHHH
Confidence 3455667889999985 44211224677888999998 899999999752110000122345554 79999999999999
Q ss_pred HHcCC-CCCCcC--CCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCcc-EEE-----cCcEEEEEecCCc---c
Q 026308 101 LSRAS-VGPTKG--VDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVD-IVT-----DGRRVVGAHNGVP---M 160 (240)
Q Consensus 101 L~g~~-~~~~~~--~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~-~i~-----~~~~~~~~~~~~~---~ 160 (240)
|+|.. +..... .....+.+++.+++++|.+. +...||+| |..+ +++ ++++.+.++.++. .
T Consensus 250 L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~ 329 (383)
T 2abs_A 250 LAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEK 329 (383)
T ss_dssp HHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGG
T ss_pred HhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCC
Confidence 98853 200000 00000145677788888774 55678889 7655 445 5556666765433 4
Q ss_pred CCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 161 MQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 161 ~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
+.+++||||+|+|.+++.++++ .++.+|+++|+.+++.+..
T Consensus 330 vvDttGAGDaF~ag~~~~l~~g-~~l~~al~~A~a~aa~~v~ 370 (383)
T 2abs_A 330 IVDTNGAGDAFVGGFLYALSQG-KTVKQCIMCGNACAQDVIQ 370 (383)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred cCcCCChHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence 6688999999999999999986 8999999999987776544
No 45
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.74 E-value=3.1e-17 Score=141.07 Aligned_cols=159 Identities=16% Similarity=0.054 Sum_probs=117.7
Q ss_pred hhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCccc---chHHHHHHhccCCeEEcCCHHHHHH
Q 026308 26 DFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGF---RLNACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~---~~~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
+.++.+|++++. |+ + ++...+.+..+++.+++.++++++||......-. .....++++ ..+++|+||..|++.
T Consensus 126 ~~~~~~~~v~~s-g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l-~~~dil~~N~~E~~~ 203 (330)
T 3iq0_A 126 NILKDCTHFHIM-GSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVL-ELTDIYMPSEGEVLL 203 (330)
T ss_dssp GGGTTEEEEEEE-GGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHH-HTCSEECCBGGGTTT
T ss_pred hHhccCCEEEEe-chhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHH-hhCCEEecCHHHHHH
Confidence 356788999986 54 3 3334566788889999999999999976321000 011234455 489999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF 178 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~ 178 (240)
|+|.+ +..+++++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.
T Consensus 204 l~g~~--------------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~ 269 (330)
T 3iq0_A 204 LSPHS--------------TPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIAC 269 (330)
T ss_dssp TCSCS--------------SHHHHHHHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred HhCCC--------------CHHHHHHHHHHcCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHH
Confidence 98852 23456778887777778889 7665 45666677778766666678899999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHH
Q 026308 179 VAVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 179 la~~~~~~~~A~~~A~~~~~~a~ 201 (240)
+.++ .++.+|+++|+.+++.+.
T Consensus 270 l~~g-~~~~~a~~~A~~~aa~~v 291 (330)
T 3iq0_A 270 RQLG-FDAHRALQYANACGALAV 291 (330)
T ss_dssp HHTT-CCHHHHHHHHHHHHHHHT
T ss_pred HHcC-CCHHHHHHHHHHHHHHHH
Confidence 9986 899999999998766543
No 46
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=9.3e-17 Score=138.99 Aligned_cols=150 Identities=17% Similarity=0.080 Sum_probs=115.0
Q ss_pred hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHH-HhccCCeEEcCCHHHHHHHHcC
Q 026308 26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLE-LVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~-~~~~~~~vitPN~~E~~~L~g~ 104 (240)
+.++.+|+++++ |..+ +.+..+++.+++.++++++||.. ++ +...+ +++ .+++|+||..|++.|+|.
T Consensus 153 ~~l~~~~~v~~~-~~~~----~~~~~~~~~a~~~g~~v~~Dp~~-----~~-~~~~~~ll~-~~dil~~N~~Ea~~l~g~ 220 (343)
T 2rbc_A 153 EDIALFDAVLVD-VRWP----ELALDVLTVARALGKPAILDGDV-----AP-VETLEGLAP-AATHIVFSEPAATRLTGL 220 (343)
T ss_dssp HHHTTCSEEEEC-SSSH----HHHHHHHHHHHHTTCCEEEEECS-----CC-HHHHHHHGG-GCSEEEEEHHHHHHHHCC
T ss_pred hhhCCCCEEEEc-CCCH----HHHHHHHHHHHHCCCEEEEECCc-----cc-cccHHHHHh-cCCEEEeCHHHHHHHcCC
Confidence 456789999986 4321 45678888899999999999975 32 23345 664 899999999999999985
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCcc-EEEcCc--EEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVD-IVTDGR--RVVGAHNGVPMMQKITATGCSVTALIAAFV 179 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~-~i~~~~--~~~~~~~~~~~~~~~~GaGD~lag~iaa~l 179 (240)
+ ++.++++.|.+.+. ..||+| |..+ ++++++ +.++++..+..+.+++|+||+|+|.+++.+
T Consensus 221 ~--------------~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l 286 (343)
T 2rbc_A 221 E--------------TVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAM 286 (343)
T ss_dssp S--------------SHHHHHHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred C--------------CHHHHHHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHH
Confidence 2 24466777887776 788999 7655 445655 677777665556788999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHH
Q 026308 180 AVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 180 a~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
+++ .++.+|+++|+.+++.+..
T Consensus 287 ~~g-~~~~~a~~~A~~~aa~~v~ 308 (343)
T 2rbc_A 287 AEG-MQSRAAVRLSSVAAALKCT 308 (343)
T ss_dssp HTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HcC-CCHHHHHHHHHHHHHHHhC
Confidence 986 8999999999987765544
No 47
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.73 E-value=3.6e-17 Score=139.67 Aligned_cols=153 Identities=17% Similarity=0.074 Sum_probs=111.5
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+++++++...+ .+.+ .+.+++.++++++||.+.. ....+++ ..+++|+||..|++.|+|.
T Consensus 135 ~~~~~~~~~v~~~~~~~----~~~~---~~~a~~~~~~v~~Dp~~~~------~~~~~ll-~~~dil~~N~~E~~~l~g~ 200 (311)
T 1vm7_A 135 WNTLSESDILLLQNEIP----FETT---LECAKRFNGIVIFDPAPAQ------GINEEIF-QYLDYLTPNEKEIEALSKD 200 (311)
T ss_dssp HHHHTTCSEEEECSSSC----HHHH---HHHHHHCCSEEEECCCSCT------TCCGGGG-GGCSEECCBHHHHHHHHHH
T ss_pred hhhcccCCEEEEeCCCC----HHHH---HHHHHHcCCEEEEeCcchh------hhhHHHH-hhCCEEeCCHHHHHHHhCC
Confidence 34567899999863322 2222 2337788999999998721 1112345 3799999999999999986
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD 182 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~ 182 (240)
+. .+.+++.+.+++|.+++...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+++.++++
T Consensus 201 ~~---------~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g 271 (311)
T 1vm7_A 201 FF---------GEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEG 271 (311)
T ss_dssp HH---------SCCCCHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred CC---------CChhHHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCC
Confidence 43 223456677888888777779999 7655 445666777777655556788999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 026308 183 PLHAFEATASALSVYGIAG 201 (240)
Q Consensus 183 ~~~~~~A~~~A~~~~~~a~ 201 (240)
.++.+|+++|+.+++.+.
T Consensus 272 -~~~~~a~~~A~~~aa~~v 289 (311)
T 1vm7_A 272 -KNPEEAVIFGTAAAAISV 289 (311)
T ss_dssp -CCHHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHHHh
Confidence 899999999998766543
No 48
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.72 E-value=1e-16 Score=139.17 Aligned_cols=159 Identities=16% Similarity=0.116 Sum_probs=115.5
Q ss_pred hhhcccCcEEEecCCC--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHHHHHHH
Q 026308 26 DFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALS 102 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E~~~L~ 102 (240)
+.++.++++++. |++ ++...+.+.++++.+++.++++++||..........+...++++ ..+++++||..|++.|+
T Consensus 167 ~~~~~~~~v~~~-G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~ 245 (352)
T 4e3a_A 167 DVVADAKVTYFE-GYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY 245 (352)
T ss_dssp HHHHTEEEEEEE-GGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHT
T ss_pred HHHhhCCEEEEe-eeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHh
Confidence 467789999986 552 44456778899999999999999999642110001122344553 27999999999999999
Q ss_pred cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHH
Q 026308 103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFV 179 (240)
Q Consensus 103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~l 179 (240)
|.. + ..++++.|.+ +...||+| |..+ +++++++.+.++..+.. +.+++||||+|+|.+.+.+
T Consensus 246 g~~-----------~---~~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l 310 (352)
T 4e3a_A 246 QTD-----------D---FEEALNRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGY 310 (352)
T ss_dssp TCS-----------C---HHHHHHHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHH
T ss_pred CCC-----------C---HHHHHHHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHH
Confidence 852 2 2345566655 45578888 7655 55677778888765543 5788999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHH
Q 026308 180 AVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 180 a~~~~~~~~A~~~A~~~~~~a~ 201 (240)
++| .++.+|+++|+.+++.+.
T Consensus 311 ~~g-~~l~~a~~~A~~aAa~~v 331 (352)
T 4e3a_A 311 TQG-RSLEDCGKLGCLAAGIVI 331 (352)
T ss_dssp HTT-CCHHHHHHHHHHHHHHHT
T ss_pred HcC-CCHHHHHHHHHHHHHHHH
Confidence 986 899999999998766543
No 49
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.72 E-value=1.5e-16 Score=136.80 Aligned_cols=162 Identities=15% Similarity=0.043 Sum_probs=115.9
Q ss_pred hhcccCcEEEecCC-CC-CChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhccCCeEEcCCHHHHHH
Q 026308 27 FTPHVRALYVNVGT-LS-ANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 27 ~~~~~d~vvi~~G~-~~-~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
.++.+|++++. |+ +. +...+.+..+++.+++.++++++||.+........ ....+++ ..+++++||..|++.
T Consensus 135 ~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~~~ 212 (332)
T 2qcv_A 135 YIRRSKLLLVS-GTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVA-EQSDIVIGTREEFDV 212 (332)
T ss_dssp HHTTEEEEEEE-GGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHH-HHCSEEEEEHHHHHH
T ss_pred HHccCCEEEEe-CccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHH-HhCCEEEccHHHHHH
Confidence 45688998886 55 32 22346678888889999999999998621110001 1223444 379999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcC-cEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDG-RRVVGAHNGVPMMQKITATGCSVTALIAA 177 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~-~~~~~~~~~~~~~~~~~GaGD~lag~iaa 177 (240)
|+|... . ++..+.+++|.+++...|++| |..+ +++++ ++.++++..+....+++|+||+|+|.+++
T Consensus 213 l~g~~~---------~--~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~ 281 (332)
T 2qcv_A 213 LENRTE---------K--GDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLY 281 (332)
T ss_dssp HTTCSS---------C--CCHHHHHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCCCc---------C--CCHHHHHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHH
Confidence 998642 1 223466777877766778899 7655 44555 55667775555567889999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 178 FVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 178 ~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
.++++ .++.+|+++|+.+++.+.+
T Consensus 282 ~l~~g-~~~~~a~~~A~~~aa~~v~ 305 (332)
T 2qcv_A 282 ALISG-KGIETALKYGSASASIVVS 305 (332)
T ss_dssp HHHTT-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCHHHHHHHHHHHHHHHHc
Confidence 99986 8999999999988776654
No 50
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.3e-16 Score=136.48 Aligned_cols=155 Identities=14% Similarity=0.090 Sum_probs=110.6
Q ss_pred hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308 26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS 105 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~ 105 (240)
+.++.+++++++...+ .+.+..+++.+++.++++++||.+.. .....++++ ..+++|+||..|++.|+|..
T Consensus 130 ~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll-~~~dil~~N~~E~~~l~g~~ 200 (317)
T 2nwh_A 130 EAIIASDFLLCDANLP----EDTLTALGLIARACEKPLAAIAISPA----KAVKLKAAL-GDIDILFMNEAEARALTGET 200 (317)
T ss_dssp HHHHHCSEEEEETTSC----HHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTG-GGCSEEEEEHHHHHHHHC--
T ss_pred hHhccCCEEEEeCCCC----HHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHh-hhCeEecCCHHHHHHHhCCC
Confidence 5677899999874322 36678888999999999999997521 011122344 37899999999999999852
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308 106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAVD 182 (240)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~ 182 (240)
. +++.+++++|.+.+...|++| |..+. +++++ ..++++..+..+.+++|+||+|+|.+.+.+.++
T Consensus 201 ~------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g 268 (317)
T 2nwh_A 201 A------------ENVRDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEG 268 (317)
T ss_dssp ---------------CTTHHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTT
T ss_pred h------------hHHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcC
Confidence 1 123345667777666668888 76554 45544 456666555556788999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 026308 183 PLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 183 ~~~~~~A~~~A~~~~~~a~~ 202 (240)
.++.+|+++|+.+.+.+..
T Consensus 269 -~~~~~a~~~A~~~aa~~v~ 287 (317)
T 2nwh_A 269 -KTIREALRQGAAAAAITVQ 287 (317)
T ss_dssp -CCHHHHHHHHHHHHHHHHS
T ss_pred -CCHHHHHHHHHHHHHHHHc
Confidence 8999999999987765543
No 51
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.70 E-value=4.3e-16 Score=133.04 Aligned_cols=156 Identities=13% Similarity=0.058 Sum_probs=108.7
Q ss_pred hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308 24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR 103 (240)
Q Consensus 24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g 103 (240)
..+.++.+|+++++ ++ ++ +....+++.+ +.+.++++||...+.. .......++++ .+++|+||..|++.|+|
T Consensus 113 ~~~~~~~~~~v~~~-~~-~~---~~~~~~~~~~-~~~~~v~~Dp~~~~~~-~~~~~~~~~l~-~~dil~~N~~E~~~l~g 184 (313)
T 3kd6_A 113 VPQYYRDSKFVCLG-NI-DP---ELQLKVLDQI-DDPKLVVCDTMNFWIE-GKPEELKKVLA-RVDVFIVNDSEARLLSG 184 (313)
T ss_dssp CCGGGTTCSEEEEC-SS-CH---HHHHHHHTTC-SSCSEEEEECCHHHHH-HCHHHHHHHHT-TCSEEEEEHHHHHHHHS
T ss_pred chHHHccCCEEEEc-CC-CH---HHHHHHHHHH-hhCCEEEEcChhhhhh-hhHHHHHHHHh-cCCEEEeCHHHHHHHhC
Confidence 34567789999984 33 32 3334555555 5678899999432110 01123445664 89999999999999998
Q ss_pred CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCc-cCCCccchhhHHHHHHHHHHh
Q 026308 104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP-MMQKITATGCSVTALIAAFVA 180 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~-~~~~~~GaGD~lag~iaa~la 180 (240)
.+ ++.+++++|.+.+...|++| |..+ +++++++.+.++..+. .+.+++||||+|+|.+++.++
T Consensus 185 ~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~ 250 (313)
T 3kd6_A 185 DP--------------NLVKTARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLA 250 (313)
T ss_dssp CS--------------CHHHHHHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHH
T ss_pred CC--------------CHHHHHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHH
Confidence 52 24567778887666678889 7655 5567777777776554 467889999999999998888
Q ss_pred cCCC-----CHHHHHHHHHHHHHHHHH
Q 026308 181 VDPL-----HAFEATASALSVYGIAGE 202 (240)
Q Consensus 181 ~~~~-----~~~~A~~~A~~~~~~a~~ 202 (240)
++ . ++.+|+++|+.+++.+.+
T Consensus 251 ~g-~~~~~~~l~~a~~~a~~~aa~~v~ 276 (313)
T 3kd6_A 251 RC-GNTSEAEMRKAVLYGSAMASFCVE 276 (313)
T ss_dssp HH-CCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cC-CCccccCHHHHHHHHHHHHHHHHe
Confidence 85 5 677888888876655443
No 52
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.69 E-value=3.1e-15 Score=128.28 Aligned_cols=159 Identities=12% Similarity=-0.006 Sum_probs=111.6
Q ss_pred hhhcccCcEEEecCC-CCC-ChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308 26 DFTPHVRALYVNVGT-LSA-NWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR 103 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~~~-~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g 103 (240)
+.+..+++++++ |+ ..+ ...+.+..+++.+++.+ .+++|+..........+...++++ .+++++||..|++.|+|
T Consensus 131 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g 207 (325)
T 3h49_A 131 ARFSQAKLLSLA-SIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALS-YVDYLFPNFAEAKLLTG 207 (325)
T ss_dssp GGGGGCSEEEEE-EETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHT-TCSEEECBHHHHHHHHT
T ss_pred hhhccCCEEEEe-cccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHh-hCCEEecCHHHHHHHhC
Confidence 346788999886 43 221 12356788888898888 566765432111111223345663 79999999999999998
Q ss_pred CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCc-cCCCccchhhHHHHHHHHHHh
Q 026308 104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP-MMQKITATGCSVTALIAAFVA 180 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~-~~~~~~GaGD~lag~iaa~la 180 (240)
.+ + ..+.++.|.+.+...|++| |..+ +++++++.+.++..+. .+.+++||||+|+|.+.+.+.
T Consensus 208 ~~-----------~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~ 273 (325)
T 3h49_A 208 KE-----------T---LDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALL 273 (325)
T ss_dssp CS-----------S---HHHHHHHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHH
T ss_pred CC-----------C---HHHHHHHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHH
Confidence 53 2 2345667777666778888 7755 4566677777775553 567889999999999998899
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 026308 181 VDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 181 ~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
++ .++.+|+++|+.+++.+..
T Consensus 274 ~g-~~~~~a~~~A~~~aa~~v~ 294 (325)
T 3h49_A 274 EG-KNLRECARFANATAAISVL 294 (325)
T ss_dssp TT-CCHHHHHHHHHHHHHHHHT
T ss_pred cC-CCHHHHHHHHHHHHHHHHc
Confidence 86 8999999999987665544
No 53
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.69 E-value=1e-16 Score=138.16 Aligned_cols=160 Identities=10% Similarity=-0.066 Sum_probs=105.2
Q ss_pred hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCC---c-ccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308 26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGA---S-GFRLNACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~---~-~~~~~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
+.++.+|+++++.+.+ ++...+.+..+++.+++.++++++||..... . ........+++ ..+++|+||..|++.
T Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~~~ 203 (338)
T 3ljs_A 125 ASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGL-SLADVVKLSSEELDY 203 (338)
T ss_dssp HHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHH-HTCSEEEEEHHHHHH
T ss_pred hHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHH-hhCCEEEecHHHHHH
Confidence 3567889998875443 4445577888999999999999999964221 0 01112344566 389999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF 178 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~ 178 (240)
|+|.+. ... .+++++|.+.+...||+| |..+ +++++++.++++..+..+.+++||||+|+|.+.+.
T Consensus 204 l~g~~~---------~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~ 271 (338)
T 3ljs_A 204 LANTLA---------ADA---NAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYT 271 (338)
T ss_dssp HHHHHT---------SCH---HHHHHHHTTTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHH
T ss_pred HhCCCC---------hhH---HHHHHHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHH
Confidence 998642 111 136777777666678888 7655 45666677777766556678899999999999988
Q ss_pred HhcCC-------------CCHHHHHHHHHHHHH
Q 026308 179 VAVDP-------------LHAFEATASALSVYG 198 (240)
Q Consensus 179 la~~~-------------~~~~~A~~~A~~~~~ 198 (240)
+++++ .++.+|+++|+.+++
T Consensus 272 l~~g~~~~~~~~~~~~~~~~l~~al~~A~~~aa 304 (338)
T 3ljs_A 272 FAQQFDDAAALIDFCHDPESIVSTLRFAAAVGA 304 (338)
T ss_dssp HHHHCSSTHHHHHHHTCHHHHHHHHHHHHHHHG
T ss_pred HHhCCCcccchhccccChHHHHHHHHHHHHHHH
Confidence 88741 467788888877544
No 54
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.68 E-value=2.4e-15 Score=128.44 Aligned_cols=159 Identities=12% Similarity=-0.000 Sum_probs=112.0
Q ss_pred hhhcccCcEEEecCC-CC-CChHHHHHHHHHHHHhcCCCEEEcccccCCc---ccc-hHHHHHHhccCCeEEcCCHHHHH
Q 026308 26 DFTPHVRALYVNVGT-LS-ANWLPSMKAAAQLASQLGKPWVLDPVAAGAS---GFR-LNACLELVQLKPTVIRGNASEII 99 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~~-~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~---~~~-~~~~~~~~~~~~~vitPN~~E~~ 99 (240)
+.++.+|++++. |+ +. +...+.+..+++.+++ +.++++||...... +.. .....+++ ..+++|+||..|++
T Consensus 131 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~N~~E~~ 207 (319)
T 3pl2_A 131 DDVREADILWFT-LTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWAL-QHSTVAVGNKEECE 207 (319)
T ss_dssp HHHHHCSEEEEE-GGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred HHhccCCEEEEe-cccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHH-HhCCEEEcCHHHHH
Confidence 456789999986 44 32 2233445566665555 67899999632110 000 12234555 48999999999999
Q ss_pred HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308 100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAA 177 (240)
Q Consensus 100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa 177 (240)
.|+|.+ +..+.+++|.+++...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+.+
T Consensus 208 ~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 273 (319)
T 3pl2_A 208 IAVGET--------------EPERAGRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCH 273 (319)
T ss_dssp HHHSCC--------------SHHHHHHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HHcCCC--------------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHH
Confidence 999852 23456777887776778888 7765 4566667777876666667889999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 178 FVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 178 ~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
.+.++ .++.+|+++|+.+++.+.+
T Consensus 274 ~l~~g-~~~~~a~~~A~~~aa~~v~ 297 (319)
T 3pl2_A 274 GLLSE-WPLEKVLRFANTAGALVAS 297 (319)
T ss_dssp HHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHcC-CCHHHHHHHHHHHHHHHHh
Confidence 89986 8999999999987665543
No 55
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.66 E-value=1e-16 Score=138.52 Aligned_cols=161 Identities=13% Similarity=-0.012 Sum_probs=111.9
Q ss_pred hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCC---cc-cchHHHHHHhccCCeEEcCCHHHHHH
Q 026308 26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGA---SG-FRLNACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~---~~-~~~~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
+.++.+|+++++... .++...+.+..+++.+++.++++++||..... .. ...+...+++ ..+++++||..|++.
T Consensus 137 ~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~Ea~~ 215 (339)
T 1tyy_A 137 PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSA-ALASICKVSADELCQ 215 (339)
T ss_dssp CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHH-HHCSEEEEEHHHHHH
T ss_pred hHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHH-hhCCEEecCHHHHHH
Confidence 345678999986332 23334466788889999999999999975321 00 0011234455 379999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF 178 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~ 178 (240)
|+|.+ +. .+++++|.+.+...||+| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.
T Consensus 216 l~g~~-----------~~---~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~ 281 (339)
T 1tyy_A 216 LSGAS-----------HW---QDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFT 281 (339)
T ss_dssp HHCCS-----------SG---GGGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred HhCCC-----------CH---HHHHHHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHH
Confidence 99853 11 234455655555668888 7655 45566667777765556678899999999999988
Q ss_pred HhcC----CCCHHHHHHHHHHHHHHHH
Q 026308 179 VAVD----PLHAFEATASALSVYGIAG 201 (240)
Q Consensus 179 la~~----~~~~~~A~~~A~~~~~~a~ 201 (240)
++++ +.++.+|+++|+.+++.+.
T Consensus 282 l~~g~~~~~~~l~~a~~~A~a~aa~~v 308 (339)
T 1tyy_A 282 LSRANCWDHALLAEAISNANACGAMAV 308 (339)
T ss_dssp HTTSSSCCHHHHHHHHHHHHHHHHHGG
T ss_pred HHhccccccccHHHHHHHHHHHHHHHh
Confidence 8873 2578899999888765443
No 56
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.66 E-value=3.9e-17 Score=140.28 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=106.6
Q ss_pred hhhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCc----ccchHHHHHHhccCCeEEcCCHHHH
Q 026308 25 PDFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS----GFRLNACLELVQLKPTVIRGNASEI 98 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~----~~~~~~~~~~~~~~~~vitPN~~E~ 98 (240)
.+.++.+|+++++ |+ + .+...+.+.++++.+++.++++++||...... ........++++ .+++++||..|+
T Consensus 139 ~~~~~~~~~v~~~-g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~ 216 (327)
T 3hj6_A 139 FELIKRSKVFHLS-TFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIIS-RADFVKPSLDDA 216 (327)
T ss_dssp HHHHC--CEEEEE-SHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHT-TCSEECCBHHHH
T ss_pred HhHhccCCEEEEC-chHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHh-hCCEEecCHHHH
Confidence 3457789999986 54 2 22244677888899999999999999853210 001123455664 899999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHH
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIA 176 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ia 176 (240)
+.|+|... .+ +.+++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.++
T Consensus 217 ~~l~g~~~-----------~~---~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~ 282 (327)
T 3hj6_A 217 RHLFGPDS-----------PE---NYVKRYLELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFI 282 (327)
T ss_dssp HHHHTTSC-----------SS---GGGGGGTTTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHH
T ss_pred HHHhCCCC-----------HH---HHHHHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHH
Confidence 99998631 11 23455665666678888 7765 456666777777666666788999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHH
Q 026308 177 AFVAVDPLHAFEATASALSVY 197 (240)
Q Consensus 177 a~la~~~~~~~~A~~~A~~~~ 197 (240)
+.+.++ .++.+|+++|+.++
T Consensus 283 ~~l~~g-~~~~~a~~~A~a~a 302 (327)
T 3hj6_A 283 CGLLDG-YTVKRSIKLGNGVA 302 (327)
T ss_dssp HTTSSC-STTHHHHHHHHCCC
T ss_pred HHHHcC-CCHHHHHHHHHHHH
Confidence 888886 89999999888643
No 57
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.66 E-value=3e-15 Score=127.35 Aligned_cols=154 Identities=18% Similarity=-0.028 Sum_probs=109.4
Q ss_pred hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc----hHHHHHHhccCCeEEcCCHHHH
Q 026308 26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR----LNACLELVQLKPTVIRGNASEI 98 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~----~~~~~~~~~~~~~vitPN~~E~ 98 (240)
+.++.+|+++++ |+ + ++...+.+..+++.+++.++++++||.+.... +. .+...+++ ..+++++||..|+
T Consensus 121 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~~~~~l-~~~dil~~N~~E~ 197 (309)
T 1v1a_A 121 DYLEGVRFLHLS-GITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTL-WSPEEARGFLERAL-PGVDLLFLSEEEA 197 (309)
T ss_dssp GGGTTCSEEEEE-TTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTT-SCHHHHHHHHHHHG-GGCSEEEEEHHHH
T ss_pred hHhcCCCEEEEe-CchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCccc-CCHHHHHHHHHHHH-HhCCEEECcHHHH
Confidence 356789999885 54 2 23345677888899999999999999863211 11 11234455 3799999999999
Q ss_pred HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEEEcC-cEEEEEecCCccCCCccchhhHHHHHHH
Q 026308 99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIVTDG-RRVVGAHNGVPMMQKITATGCSVTALIA 176 (240)
Q Consensus 99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i~~~-~~~~~~~~~~~~~~~~~GaGD~lag~ia 176 (240)
+.|+|. . + +.++ +.+...|++| |..+.++.+ ++.++++..+..+.+++|+||+|+|.+.
T Consensus 198 ~~l~g~-----------~--~---~~~~---~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~ 258 (309)
T 1v1a_A 198 ELLFGR-----------V--E---EALR---ALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYL 258 (309)
T ss_dssp HHHHSS-----------H--H---HHHH---HTCCSEEEEECGGGCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHH
T ss_pred HHHhCC-----------H--H---HHHH---hcCCCEEEEEecCCCeeEecCCcEEEeCCCCCCcCCCCCchHHHHHHHH
Confidence 999973 1 1 2222 4455678888 765544343 5666776655556688999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 177 AFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 177 a~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
+.+.++ .++.+|+++|+.+++.+.+
T Consensus 259 ~~l~~g-~~~~~a~~~a~~~aa~~v~ 283 (309)
T 1v1a_A 259 AGAVWG-LPVEERLRLANLLGASVAA 283 (309)
T ss_dssp HHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence 889986 8999999999987766544
No 58
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.65 E-value=1.3e-15 Score=129.31 Aligned_cols=147 Identities=13% Similarity=0.010 Sum_probs=106.7
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP 108 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~ 108 (240)
+.+|+++++.+.+ +.+..+++.+++.+ ++++||..... .+..+...++++ .+++++||..|++.|+|...
T Consensus 129 ~~~~~v~~~~~~~-----~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~~~-- 198 (302)
T 2c4e_A 129 FNTEIVHIATGDP-----EFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIE-HTNFLFMNKHEFERASNLLN-- 198 (302)
T ss_dssp CCEEEEEECSSCH-----HHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHH-TCSEEEEEHHHHHHHHHHHT--
T ss_pred ccCCEEEEeCCCc-----HHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHh-cCCEEEcCHHHHHHHhCCCC--
Confidence 5678888864322 56778888899889 99999985211 111233455664 89999999999999998642
Q ss_pred CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHHhcCCCC
Q 026308 109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFVAVDPLH 185 (240)
Q Consensus 109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~~~ 185 (240)
.+. . +|.++ ...|++| |..+ +++++++.++++..+.. ..+++|+||+|+|.+.+.++++ .+
T Consensus 199 -------~~~-~------~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g-~~ 262 (302)
T 2c4e_A 199 -------FEI-D------DYLER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKG-YD 262 (302)
T ss_dssp -------CCH-H------HHHTT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTT-CC
T ss_pred -------ccH-H------HHHhc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcC-CC
Confidence 111 1 56666 6678889 6655 45566667777765555 6788999999999999999986 89
Q ss_pred HHHHHHHHHHHHHHHH
Q 026308 186 AFEATASALSVYGIAG 201 (240)
Q Consensus 186 ~~~A~~~A~~~~~~a~ 201 (240)
+.+|+++|+.+++.+.
T Consensus 263 ~~~a~~~a~~~aa~~~ 278 (302)
T 2c4e_A 263 LEKCGLIGAATASFVV 278 (302)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998766544
No 59
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.64 E-value=1.1e-15 Score=133.54 Aligned_cols=166 Identities=15% Similarity=0.111 Sum_probs=112.9
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.++++++. |++.+...+.+.++++.+++.++++++|+.......+..+.+.++++ .+|+++||+.|++.|++.
T Consensus 175 ~~~i~~a~~~~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~-~~Dil~~Ne~Ea~~l~~~ 252 (372)
T 3uq6_A 175 WSLVEKAQVYYIA-GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS-YSNIVFGNESEAEAYGEV 252 (372)
T ss_dssp HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT-TCSEEEEEHHHHHHHHHH
T ss_pred HHHhhcccEEEEe-cccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhh-cCCcccCCHHHHHHHhCC
Confidence 3567789999986 66433335667788899999999999998753221222233455664 789999999999999986
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCccEE-EcCcE--EEE--EecCC-ccCCCccchhhH
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVDIV-TDGRR--VVG--AHNGV-PMMQKITATGCS 170 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~~i-~~~~~--~~~--~~~~~-~~~~~~~GaGD~ 170 (240)
.. ...++..+.++.+.+. ....||+| |..+.+ +++++ +.. +++.+ ..+.+++||||+
T Consensus 253 ~~---------~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDa 323 (372)
T 3uq6_A 253 HG---------LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDA 323 (372)
T ss_dssp TT---------CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHH
T ss_pred CC---------CchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHH
Confidence 42 2234555666666542 23458888 876644 44332 222 22222 245688999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 171 VTALIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
|+|.+.+.+.+| .++.+++++|+.+++.+++
T Consensus 324 F~agfl~~l~~g-~~l~~a~~~a~~aAa~vv~ 354 (372)
T 3uq6_A 324 FAAGFIADYIRG-KPMITSLHAAVKAAAYIIC 354 (372)
T ss_dssp HHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence 988887778886 8999999999987665544
No 60
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.63 E-value=4.4e-15 Score=127.89 Aligned_cols=150 Identities=12% Similarity=-0.012 Sum_probs=106.2
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG 107 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~ 107 (240)
++.+|+++++ |.. .+.+..+++.+++.++++++||.+... .+..+...++++ .+++++||..|++.|+|...
T Consensus 146 l~~~~~v~~~-~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~l~~~l~-~~dil~~N~~E~~~l~g~~~- 217 (334)
T 2pkf_A 146 IGKPELVIIG-AND----PEAMFLHTEECRKLGLAFAADPSQQLA-RLSGEEIRRLVN-GAAYLFTNDYEWDLLLSKTG- 217 (334)
T ss_dssp HCSCSEEEEE-SCC----HHHHHHHHHHHHHHTCCEEEECGGGGG-TSCHHHHHTTTT-TCSEEEEEHHHHHHHHHHHC-
T ss_pred hcCCCEEEEc-CCC----hHHHHHHHHHHHhcCCeEEEeccchhh-hhhHHHHHHHHh-cCCEEecCHHHHHHHhccCC-
Confidence 4688999986 332 255677888889899999999986321 011122344553 78999999999999998642
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcE-EEEEecCCcc-CCCccchhhHHHHHHHHHHhcCC
Q 026308 108 PTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRR-VVGAHNGVPM-MQKITATGCSVTALIAAFVAVDP 183 (240)
Q Consensus 108 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~-~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~ 183 (240)
.+.+ .+.+. ...|++| |..+ +++++++ .++++..+.. +.+++|+||+|+|.+.+.+.++
T Consensus 218 --------~~~~-------~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g- 280 (334)
T 2pkf_A 218 --------WSEA-------DVMAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAG- 280 (334)
T ss_dssp --------CCHH-------HHHTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTT-
T ss_pred --------CCHH-------HHHhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcC-
Confidence 2222 23333 4568888 7655 4455555 6777755543 4688999999999999889986
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 026308 184 LHAFEATASALSVYGIAGE 202 (240)
Q Consensus 184 ~~~~~A~~~A~~~~~~a~~ 202 (240)
.++.+|+++|+.+++.+.+
T Consensus 281 ~~~~~a~~~A~~~aa~~v~ 299 (334)
T 2pkf_A 281 LGLERSAQLGSLVAVLVLE 299 (334)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999987766544
No 61
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.62 E-value=8.4e-15 Score=125.76 Aligned_cols=149 Identities=12% Similarity=0.031 Sum_probs=106.0
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP 108 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~ 108 (240)
+.+|+++++ +.. .+.+.++++.+++.++++++||.+... .+..+..+++++ .+++++||..|++.|+|...
T Consensus 134 ~~~~~v~~~-~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~Ea~~l~g~~~-- 204 (326)
T 3b1n_A 134 KDIKLAIVG-PDG----FQGMVQHTEELAQAGVPFIFDPGQGLP-LFDGATLRRSIE-LATYIAVNDYEAKLVCDKTG-- 204 (326)
T ss_dssp CSCSEEEEC-SCC----HHHHHHHHHHHHHHTCCEEECCGGGGG-GCCHHHHHHHHH-HCSEEEEEHHHHHHHHHHHC--
T ss_pred cCCCEEEEC-Ccc----HHHHHHHHHHHHHCCCEEEEeCchhhh-hccHHHHHHHHH-hCCEEecCHHHHHHHhCCCC--
Confidence 678888885 322 256677888889999999999976321 111233455664 68999999999999998542
Q ss_pred CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHHhcCCCC
Q 026308 109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFVAVDPLH 185 (240)
Q Consensus 109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~~~ 185 (240)
.+.++ +.+. ...|++| |..+ +++++++.+.++..+.. +.+++|+||+|+|.+.+.+.++ .+
T Consensus 205 -------~~~~~-------l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g-~~ 268 (326)
T 3b1n_A 205 -------WSEDE-------IASR-VQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHG-FD 268 (326)
T ss_dssp -------CCHHH-------HHTT-SSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTT-CC
T ss_pred -------CCHHH-------HHhc-CCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcC-CC
Confidence 22222 3333 4568888 7655 45566677777755543 4588999999999999889886 89
Q ss_pred HHHHHHHHHHHHHHHHH
Q 026308 186 AFEATASALSVYGIAGE 202 (240)
Q Consensus 186 ~~~A~~~A~~~~~~a~~ 202 (240)
+.+|+++|+.+++.+.+
T Consensus 269 ~~~a~~~A~~~aa~~v~ 285 (326)
T 3b1n_A 269 WATAGRLASLMGALKIA 285 (326)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999987765544
No 62
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.61 E-value=7.4e-15 Score=125.30 Aligned_cols=141 Identities=14% Similarity=0.104 Sum_probs=106.3
Q ss_pred hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308 24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR 103 (240)
Q Consensus 24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g 103 (240)
+.+.++.+|+++++...+ .+.+..+++.+++.++++++||.+... . .+..+++++ .+++++||..|++.|+|
T Consensus 137 ~~~~l~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~--~-~~~~~~ll~-~~dil~~N~~Ea~~l~g 208 (310)
T 3go6_A 137 VPSAVANCDVLLTQLEIP----VATALAAARAAQSADAVVMVNASPAGQ--D-RSSLQDLAA-IADVVIANEHEANDWPS 208 (310)
T ss_dssp CTTTTTTCSEEEECSSSC----HHHHHHHHHHHHHTTCEEEEECCSSSC--C-HHHHHHHHH-HCSEEEEEHHHHHHSSS
T ss_pred HHHHhhcCCEEEECCCCC----HHHHHHHHHHHHHcCCEEEEcCCcccc--c-hHHHHHHHh-hCCEEEeCHHHHHHHhC
Confidence 456678899999863322 366788888999999999999986321 1 223345653 79999999999999876
Q ss_pred CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308 104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~ 181 (240)
. ...|++| |..+ +++++++.+.++..+..+.+++||||+|+|.+.+.+.+
T Consensus 209 ~----------------------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~ 260 (310)
T 3go6_A 209 P----------------------------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPR 260 (310)
T ss_dssp C----------------------------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCS
T ss_pred C----------------------------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHh
Confidence 1 3468888 7655 45667777888766666678899999999999888887
Q ss_pred ----CCCCHHHHHHHHHHHHHHHH
Q 026308 182 ----DPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 182 ----~~~~~~~A~~~A~~~~~~a~ 201 (240)
+ .++.+|+++|+.+++.+.
T Consensus 261 ~~~~g-~~l~~a~~~A~~~aa~~v 283 (310)
T 3go6_A 261 NPGSP-AERLRALRRACAAGALAT 283 (310)
T ss_dssp SSCCH-HHHHHHHHHHHHHHHHHT
T ss_pred cccCC-CCHHHHHHHHHHHHHHHh
Confidence 6 688899999988766543
No 63
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.60 E-value=8.6e-15 Score=124.15 Aligned_cols=139 Identities=18% Similarity=0.070 Sum_probs=105.2
Q ss_pred hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308 25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA 104 (240)
Q Consensus 25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~ 104 (240)
.+.++.+|+++++ |..+ .+.+..+++.+++.++++++||.... ....+++ ..+++++||..|++.|+|.
T Consensus 126 ~~~~~~~~~v~~~-g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll-~~~dil~~N~~E~~~l~g~ 194 (299)
T 3ikh_A 126 MADAVAGDILLQQ-GNFS---LDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLW-PLIDIAVVNESEAELLQPY 194 (299)
T ss_dssp GTTCCTTCEEEEC-SCSC---HHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCG-GGCSEEEEEHHHHHHHCCC
T ss_pred HhhhccCCEEEEC-CCCC---HHHHHHHHHHHHHcCCEEEEccccch------hhHHHHH-hhCCEEEecHHHHHHHhcC
Confidence 3456788999986 4333 35678888899999999999997621 1123444 4799999999999998751
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHH-HHHHHHhc
Q 026308 105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTA-LIAAFVAV 181 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag-~iaa~la~ 181 (240)
+...|++| |..+ +++++++.+.++..+..+.+++|+||+|+| .+++.+.+
T Consensus 195 ---------------------------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~ 247 (299)
T 3ikh_A 195 ---------------------------GVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLR 247 (299)
T ss_dssp ---------------------------SCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHT
T ss_pred ---------------------------CCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHc
Confidence 23468888 7655 456666777777666666788999999999 99988988
Q ss_pred CCCCHHH-HHHHHHHHHHHHHH
Q 026308 182 DPLHAFE-ATASALSVYGIAGE 202 (240)
Q Consensus 182 ~~~~~~~-A~~~A~~~~~~a~~ 202 (240)
+ .++.+ |+++|+.+++.+.+
T Consensus 248 g-~~~~~~a~~~a~~~aa~~v~ 268 (299)
T 3ikh_A 248 G-VAPDALALAHASRAAAITVS 268 (299)
T ss_dssp T-SSSCHHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHHHHhC
Confidence 6 89999 99999987776554
No 64
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.60 E-value=8e-15 Score=124.30 Aligned_cols=152 Identities=15% Similarity=0.047 Sum_probs=104.9
Q ss_pred cccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCC----cccc---hHHHHHHhccCCeEEcCCHHHHHH
Q 026308 29 PHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGA----SGFR---LNACLELVQLKPTVIRGNASEIIA 100 (240)
Q Consensus 29 ~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~----~~~~---~~~~~~~~~~~~~vitPN~~E~~~ 100 (240)
..+++++++ ++ +.+.. ..+++.+++.++++++||.+.-. ..++ .+...++++ .+++++||..|++.
T Consensus 118 ~~~~~v~~~-~~~~~~~~----~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~ 191 (298)
T 1vk4_A 118 IEGEAVHIN-PLWYGEFP----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK-YLDLFKVDSREAET 191 (298)
T ss_dssp CCSSEEEEC-CSSTTSSC----GGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG-GCSEEEEEHHHHHH
T ss_pred CCCCEEEEC-Cccccccc----HHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc-cCCEEecCHHHHHH
Confidence 467888875 44 32221 34566677889999999975100 0010 012345664 79999999999999
Q ss_pred HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308 101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179 (240)
Q Consensus 101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l 179 (240)
|+|.+ ++.++++.|.+.+...||+|...+ +++++ +.+.++.++..+.+++|+||+|+|.+.+.+
T Consensus 192 l~g~~--------------~~~~~~~~l~~~g~~~vvvT~~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l 256 (298)
T 1vk4_A 192 LTGTN--------------DLRESCRIIRSFGAKIILATHASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGF 256 (298)
T ss_dssp HHSCS--------------CHHHHHHHHHHTTCSSEEEEETTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHH
T ss_pred HhCCC--------------CHHHHHHHHHhcCCCEEEEEcCCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHH
Confidence 99852 244566777776656688886323 45555 666777655556688999999999999889
Q ss_pred hc-CCCCHHHHHHHHHHHHHHHHH
Q 026308 180 AV-DPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 180 a~-~~~~~~~A~~~A~~~~~~a~~ 202 (240)
.+ + .++.+|+++|+.+++.+.+
T Consensus 257 ~~~g-~~~~~a~~~A~a~aa~~v~ 279 (298)
T 1vk4_A 257 VFKK-MSIEKATKFAAAVTSVKMR 279 (298)
T ss_dssp HTSC-CCHHHHHHHHHHHHHHHTT
T ss_pred HHcC-CCHHHHHHHHHHHHHHHHc
Confidence 88 7 8999999999987665543
No 65
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.57 E-value=2e-14 Score=122.46 Aligned_cols=156 Identities=15% Similarity=0.087 Sum_probs=106.4
Q ss_pred hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCc---ccc-hHHHHHHhccCCe--EEcCCHH
Q 026308 26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS---GFR-LNACLELVQLKPT--VIRGNAS 96 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~---~~~-~~~~~~~~~~~~~--vitPN~~ 96 (240)
+.++.+|+++++ |+ + ++...+.+..+++.+++. ++||...... ... .+...++++ .++ +++||..
T Consensus 124 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~-~~d~~il~~N~~ 197 (313)
T 2v78_A 124 NYVRNSRLVHST-GITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILK-KYDIEVLITDPD 197 (313)
T ss_dssp HHHHTSSEEEEE-HHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHH-HSCEEEEEECHH
T ss_pred HHhcCCCEEEEc-CchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHH-hcCeeEEECcHH
Confidence 346788999885 43 2 222334555666655443 8999753110 000 112344553 789 9999999
Q ss_pred HHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308 97 EIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTAL 174 (240)
Q Consensus 97 E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ 174 (240)
|++.|+|.. ++.+++++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.
T Consensus 198 E~~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag 263 (313)
T 2v78_A 198 DTKILLDVT--------------DPDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGT 263 (313)
T ss_dssp HHHHHHSCC--------------CHHHHHHHHHHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHH
T ss_pred HHHHHhCCC--------------CHHHHHHHHHhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHH
Confidence 999999852 23356777777555568888 7655 4456667777776655567889999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 175 IAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 175 iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
+.+.+.++ .++.+|+++|+.+++.+.+
T Consensus 264 ~~~~l~~g-~~~~~a~~~a~~~aa~~v~ 290 (313)
T 2v78_A 264 FVSLYLQG-KDIEYSLAHGIAASTLVIT 290 (313)
T ss_dssp HHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-CCHHHHHHHHHHHHHHHhc
Confidence 99889986 8999999999987766544
No 66
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.56 E-value=1.7e-14 Score=122.74 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=105.7
Q ss_pred hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhcc--CCeEEcCCHH
Q 026308 26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQL--KPTVIRGNAS 96 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~--~~~vitPN~~ 96 (240)
+.++.+|+++++ |+ + ++...+.+.++++.+++. ++||...... +.. ....+++ . .+++++||..
T Consensus 124 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~-~~~~~~~~~~~~~l-~~~~~dil~~N~~ 196 (311)
T 2dcn_A 124 EYVKSADLVHSS-GITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKL-WSAEEAKREILKLL-SKFHLKFLITDTD 196 (311)
T ss_dssp HHHTTCSEEEEE-HHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTT-SCHHHHHHHHHHHH-HHCCEEEEEEEHH
T ss_pred HHHcCCCEEEEe-CcccccChHHHHHHHHHHHHHHHh----CcCccCchhh-CChHHHHHHHHHHH-hhcCCcEEECCHH
Confidence 346788999885 43 2 222345556666665544 8999763210 111 1233455 4 7899999999
Q ss_pred HHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308 97 EIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTAL 174 (240)
Q Consensus 97 E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ 174 (240)
|++.|+|.. ++.+++++|.+. ...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.
T Consensus 197 E~~~l~g~~--------------~~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~ 261 (311)
T 2dcn_A 197 DSKIILGES--------------DPDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGT 261 (311)
T ss_dssp HHHHHHSCC--------------CHHHHHHHHTTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHH
T ss_pred HHHHHhCCC--------------CHHHHHHHHHHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHH
Confidence 999999852 233566777765 4558888 7765 4456667777776665567889999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308 175 IAAFVAVDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 175 iaa~la~~~~~~~~A~~~A~~~~~~a~ 201 (240)
+.+.+.++ .++.+|+++|+.+++.+.
T Consensus 262 ~~~~l~~g-~~~~~a~~~a~~~aa~~v 287 (311)
T 2dcn_A 262 FLSLYYKG-FEMEKALDYAIVASTLNV 287 (311)
T ss_dssp HHHHHTTT-CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence 99889986 899999999998766543
No 67
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.53 E-value=7.7e-14 Score=120.71 Aligned_cols=183 Identities=14% Similarity=0.065 Sum_probs=111.1
Q ss_pred hhhhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCC--cc-cchHHHHHHhccCCeEEcCCHHH
Q 026308 24 IPDFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGA--SG-FRLNACLELVQLKPTVIRGNASE 97 (240)
Q Consensus 24 ~~~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~--~~-~~~~~~~~~~~~~~~vitPN~~E 97 (240)
+.+.++.++++.++ |+ + ++...+.+.++++.+++.++++++||..... .. .......+++ ..+|+++||..|
T Consensus 144 ~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l-~~~dil~~N~~E 221 (351)
T 4gm6_A 144 LSELLKGIRVLHVS-GITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLL-PLVDYCSAGQMD 221 (351)
T ss_dssp HHHHHTTEEEEEEE-HHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHG-GGCSEEECCHHH
T ss_pred HHHHHhhcccceec-ccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHH-HhCCccccCHHH
Confidence 45677888998885 43 2 3444567788999999999999999953211 00 0011234455 379999999999
Q ss_pred HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhc-----CCEEEEe-cC---ccEEEcCcEEEEEecCC-ccCCCccch
Q 026308 98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEAS-----GAIVAVS-GA---VDIVTDGRRVVGAHNGV-PMMQKITAT 167 (240)
Q Consensus 98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~-----~~~Vvit-G~---~~~i~~~~~~~~~~~~~-~~~~~~~Ga 167 (240)
++.|+|... +. .+..+......... ...++++ +. ...++..++.+..++.+ ..+.+++||
T Consensus 222 a~~l~g~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGA 291 (351)
T 4gm6_A 222 AVAFFEISS---------ET-TDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGG 291 (351)
T ss_dssp HHHTSCCCT---------TC-SCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTH
T ss_pred HHHHhCCCC---------ch-hHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCCh
Confidence 999998653 11 22222222211111 1112222 22 23445555555554333 346688999
Q ss_pred hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCC--ccccHHHHHHHHhc
Q 026308 168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKG--PASLRMHMIDCLHG 224 (240)
Q Consensus 168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~--~g~~~~~~~~~l~~ 224 (240)
||+|.|.+...+.++ .++.+|+++|+.+.+.+. .+ .| +....+++.+.+.+
T Consensus 292 GDaF~ag~l~~l~~g-~~~~~al~~A~aaaal~v----~~-~Ga~~~~~~~ev~~~l~~ 344 (351)
T 4gm6_A 292 GDAYTAAVLHGILSE-WRPDETVKFATAAAGLKH----SI-HGDINPFDEKTIADFAAD 344 (351)
T ss_dssp HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHT----TS-SSSSCCCCHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHh----CC-CCCCCCCCHHHHHHHHhC
Confidence 999988888778885 899999999988655433 32 33 23344555555543
No 68
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.53 E-value=1.5e-13 Score=117.09 Aligned_cols=147 Identities=12% Similarity=0.024 Sum_probs=101.9
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhc--------CCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHH
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQL--------GKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEII 99 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~--------~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~ 99 (240)
++.+|+++++ |.. .+.+..+++.+++. ++++++||... + +...++++ .+++|+||..|++
T Consensus 144 l~~~~~v~~~-~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~-----~-~~~~~~l~-~~dil~~n~~ea~ 211 (312)
T 2hlz_A 144 LTQFKWIHIE-GRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP-----R-EELFQLFG-YGDVVFVSKDVAK 211 (312)
T ss_dssp GGGEEEEEEE-CSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC-----C-GGGGGGGG-SSSEEEECHHHHH
T ss_pred hccCCEEEEe-ccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc-----h-HHHHHHHh-cCCEEEEcHHHHH
Confidence 4678899986 442 24456667777766 67899998752 1 12234553 7899999999999
Q ss_pred HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcC--CEEEEe-cCcc-EEEcC-cEEEEEecC-CccCCCccchhhHHHH
Q 026308 100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASG--AIVAVS-GAVD-IVTDG-RRVVGAHNG-VPMMQKITATGCSVTA 173 (240)
Q Consensus 100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~--~~Vvit-G~~~-~i~~~-~~~~~~~~~-~~~~~~~~GaGD~lag 173 (240)
.| |. .+. .+.++.+.+.+. ..|++| |..+ ++++. +..+.++.. ...+.+++|+||+|+|
T Consensus 212 ~l-g~-----------~~~---~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a 276 (312)
T 2hlz_A 212 HL-GF-----------QSA---EEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNA 276 (312)
T ss_dssp HT-TC-----------CSH---HHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHH
T ss_pred Hc-CC-----------CCH---HHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHH
Confidence 87 53 122 345556666554 578888 7655 44543 446666652 3346688999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308 174 LIAAFVAVDPLHAFEATASALSVYGIAGE 202 (240)
Q Consensus 174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~ 202 (240)
.+.+.+.++ .++.+|+++|+.+.+.+..
T Consensus 277 ~~~~~l~~g-~~~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 277 SVIFSLSQG-RSVQEALRFGCQVAGKKCG 304 (312)
T ss_dssp HHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence 999889986 8999999999987665543
No 69
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.53 E-value=1.5e-13 Score=117.09 Aligned_cols=149 Identities=12% Similarity=0.073 Sum_probs=105.2
Q ss_pred hhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc--h----HHHHHHhccCCeEEcCCHHH
Q 026308 26 DFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR--L----NACLELVQLKPTVIRGNASE 97 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~--~----~~~~~~~~~~~~vitPN~~E 97 (240)
+.++.++++.++ |+ + .+...+.+..+++.++ .++++++||..... .+. . ....+++ ..+++++||..|
T Consensus 120 ~~l~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~-~~~~~~~~~~~~~~~~l-~~~di~~~N~~E 195 (313)
T 3ewm_A 120 DIVEEAKIVNFG-SVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLD-LWRGQEEEMIKVLEESI-KLADIVKASEEE 195 (313)
T ss_dssp HHHHHCSEEEEE-SGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGG-GGTTCHHHHHHHHHHHH-HHCSEEEEEHHH
T ss_pred HHhCCCCEEEEc-CcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChH-HcCCCHHHHHHHHHHHH-hhCCEEecCHHH
Confidence 356678998886 55 3 3344567788888887 46899999975221 011 0 1234455 378999999999
Q ss_pred HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHH
Q 026308 98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALI 175 (240)
Q Consensus 98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~i 175 (240)
++.|++... .. .....||+| |..+ +++++++.+.++..+..+.+++|+||+|+|.+
T Consensus 196 ~~~l~~~~~---------~~-------------~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~ 253 (313)
T 3ewm_A 196 VLYLENQGV---------EV-------------KGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAAL 253 (313)
T ss_dssp HHHHHTTTC---------CC-------------CCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred HHHHhccCc---------cc-------------cCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHH
Confidence 999998643 10 113447888 7655 45667777888876666778899999999999
Q ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHH
Q 026308 176 AAFVA--VDPLHAFEATASALSVYGIAG 201 (240)
Q Consensus 176 aa~la--~~~~~~~~A~~~A~~~~~~a~ 201 (240)
.+.++ ++ .++.+|+++|+.+++.+.
T Consensus 254 ~~~l~~~~g-~~l~~a~~~A~~~aa~~v 280 (313)
T 3ewm_A 254 LVGILKLKG-LDLLKLGKFANLVAALST 280 (313)
T ss_dssp HHHHHHSSS-CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCC-CCHHHHHHHHHHHHHHHH
Confidence 88887 75 899999999988766443
No 70
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.44 E-value=3.8e-13 Score=114.45 Aligned_cols=138 Identities=9% Similarity=-0.059 Sum_probs=96.2
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP 108 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~ 108 (240)
+.+|+++++.. . .+.++++.+++ ++++||.+.-. .+..+...++++ .+++++||..|++.|+|...
T Consensus 139 ~~~~~v~~~~~-~------~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~~~-- 204 (306)
T 3bf5_A 139 DEYEYVHFSTG-P------NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHE-ISYMSIFNDHEYRVFREMTG-- 204 (306)
T ss_dssp SCEEEEEECSS-S------SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHH-HCSEEEEEHHHHHHHHHHHC--
T ss_pred CCCCEEEECCh-H------HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHh-cCCEEEcCHHHHHHHhCCCC--
Confidence 56788888633 2 23556665554 89999985211 111223445663 78999999999999998642
Q ss_pred CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCH
Q 026308 109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHA 186 (240)
Q Consensus 109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~ 186 (240)
.+.. ++ .|++| |..+ +++++++.+.++..+.. .+++|+||+|+|.+.+.+.++ .++
T Consensus 205 -------~~~~-------~l------~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g-~~~ 262 (306)
T 3bf5_A 205 -------LSSP-------KV------TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNR-RSI 262 (306)
T ss_dssp -------CSSC-------SS------CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTT-CCH
T ss_pred -------cCcc-------cE------EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcC-CCH
Confidence 1111 11 17778 7765 44566677777766656 788999999999999888886 899
Q ss_pred HHHHHHHHHHHHHHHH
Q 026308 187 FEATASALSVYGIAGE 202 (240)
Q Consensus 187 ~~A~~~A~~~~~~a~~ 202 (240)
.+|+++|+.+++.+.+
T Consensus 263 ~~a~~~A~~~aa~~v~ 278 (306)
T 3bf5_A 263 EKGMIYGTIIAHHVID 278 (306)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999988776654
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=92.55 E-value=2.1 Score=37.96 Aligned_cols=104 Identities=8% Similarity=-0.026 Sum_probs=58.3
Q ss_pred hhcccCcEEEecCC--CCC-----Ch-HHHH---HHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCH
Q 026308 27 FTPHVRALYVNVGT--LSA-----NW-LPSM---KAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNA 95 (240)
Q Consensus 27 ~~~~~d~vvi~~G~--~~~-----~~-~~~~---~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~ 95 (240)
..+..|.+|++ |+ +.+ +. .+.+ ...++..+..++++-+--.......++......++ +.+|.|=-|+
T Consensus 233 ~~~~~d~~vLS-Glq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~-p~vDSlGmNE 310 (474)
T 3drw_A 233 IGKEVDGAIFS-GYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNIL-PFVDSVGIDE 310 (474)
T ss_dssp HHHHCSEEEEC-CGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTG-GGSSEEEEEH
T ss_pred hhcCCCEEEEe-ccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhc-ccccccccCH
Confidence 33468999995 76 443 22 2223 34455556678888874433221112222233344 5799999999
Q ss_pred HHHHHHHcCCCCCCc---CCCCCCChHHHHHHHHHHHHhcC
Q 026308 96 SEIIALSRASVGPTK---GVDSSHESMDAMEAARCLAEASG 133 (240)
Q Consensus 96 ~E~~~L~g~~~~~~~---~~~~~~~~~~~~~~a~~l~~~~~ 133 (240)
.|+..+++.-. ..+ .+......+++.+++..|.++++
T Consensus 311 qELa~l~~~lg-~~~~s~~~~~~~~i~~v~e~~~~ll~~~~ 350 (474)
T 3drw_A 311 AEIAQILSVLG-YRELADRIFTYNRLEDSILGGMIILDELN 350 (474)
T ss_dssp HHHHHHHHHHT-CHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhc-CCccchhhhcCCCHHHHHHHHHHHHHHcC
Confidence 99999987411 000 00001245677788888887754
No 72
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=74.09 E-value=2.8 Score=36.92 Aligned_cols=66 Identities=11% Similarity=0.231 Sum_probs=40.8
Q ss_pred hhHHHHHcCCCcccCC----------CCCchhhhhccc-----CcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 4 VANTLLSAGASPAMLH----------TIEEIPDFTPHV-----RALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 4 ~a~~~~~~g~~~~~~~----------~~~~~~~~~~~~-----d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+.+++...|..|.-.. +++.+++.+++. -+|+..++.-.+...+-+..+.+.++++|+|++||..
T Consensus 157 v~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A 236 (450)
T 3bc8_A 157 CFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNA 236 (450)
T ss_dssp HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECC
Confidence 4678888898873332 344555555431 2344455543222224457888899999999999964
Q ss_pred c
Q 026308 69 A 69 (240)
Q Consensus 69 ~ 69 (240)
-
T Consensus 237 ~ 237 (450)
T 3bc8_A 237 Y 237 (450)
T ss_dssp T
T ss_pred C
Confidence 3
No 73
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=67.23 E-value=3.8 Score=36.46 Aligned_cols=65 Identities=8% Similarity=0.272 Sum_probs=37.9
Q ss_pred hhHHHHHcCCCcccCC----------CCCchhhhhccc--CcEEE---ecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 4 VANTLLSAGASPAMLH----------TIEEIPDFTPHV--RALYV---NVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 4 ~a~~~~~~g~~~~~~~----------~~~~~~~~~~~~--d~vvi---~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+-+++...|..|+-.. +++.+++.+++. +.+++ .+..-.+...+-++++.+.|+++|+|++||-.
T Consensus 175 v~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeA 254 (501)
T 3hl2_A 175 CFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNA 254 (501)
T ss_dssp HHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCc
Confidence 4578888899884442 334556665542 33322 11110011113357888899999999999954
No 74
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=56.72 E-value=16 Score=28.18 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=47.5
Q ss_pred CCCcccC--CCCCchhhhhc-ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--c
Q 026308 12 GASPAML--HTIEEIPDFTP-HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--L 86 (240)
Q Consensus 12 g~~~~~~--~~~~~~~~~~~-~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~ 86 (240)
..+|++. .+.+.++..++ .++++++..|-+ ..+..+++.+++.+.++++.++.+...+.+.. .-+++. .
T Consensus 8 ~~~piI~Avr~~~~l~~al~s~~~~ifll~g~i-----~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~-ai~fL~~~~ 81 (192)
T 3kts_A 8 SNQSIIPAAHNQKDMEKILELDLTYMVMLETHV-----AQLKALVKYAQAGGKKVLLHADLVNGLKNDDY-AIDFLCTEI 81 (192)
T ss_dssp TTCCEEEEESSSHHHHHHTTSSCCEEEECSEET-----TTHHHHHHHHHHTTCEEEEEGGGEETCCCSHH-HHHHHHHTT
T ss_pred hcCCEEEEecCHHHHHHHHcCCCCEEEEecCcH-----HHHHHHHHHHHHcCCeEEEecCchhccCCcHH-HHHHHHhCC
Confidence 4566444 56666666544 578888765544 23477888899999999999988765433322 223332 3
Q ss_pred CCe-EEcCCH
Q 026308 87 KPT-VIRGNA 95 (240)
Q Consensus 87 ~~~-vitPN~ 95 (240)
+|+ +|+-+.
T Consensus 82 ~pdGIIsTk~ 91 (192)
T 3kts_A 82 CPDGIISTRG 91 (192)
T ss_dssp CCSEEEESCH
T ss_pred CCCEEEeCcH
Confidence 565 454443
No 75
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=54.77 E-value=62 Score=28.42 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=59.4
Q ss_pred cccCcEEEecCC--CCCCh-----HHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308 29 PHVRALYVNVGT--LSANW-----LPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIAL 101 (240)
Q Consensus 29 ~~~d~vvi~~G~--~~~~~-----~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L 101 (240)
.++|.++++ |+ +.+.. .+.++.+. .....++++-++-.......++.... .++ +..|.|--|+.|+..+
T Consensus 224 ~~~dl~vlS-G~q~l~~~~~~~~~~~~l~~i~-~L~~~~~~iH~ElAs~~~~~~~~~i~-~il-p~vDSlGmNE~EL~~l 299 (455)
T 1ua4_A 224 KNVQLAILS-GLQALTKENYKEPFEIVKSNLE-VLNEREIPVHLEFAFTPDEKVREEIL-NVL-GMFYSVGLNEVELASI 299 (455)
T ss_dssp GGCSEEEEC-CGGGCCTTTCHHHHHHHHHHHH-HHHHTTCCEEEECCCCCCHHHHHHHH-HHG-GGCSEEEECHHHHHHH
T ss_pred cCCcEEEEe-chhcccccchHHHHHHHHHHHH-HhcCCCceEEEEeCCccCHHHHHHHH-hhh-ccCcccccCHHHHHHH
Confidence 449999995 76 43321 12222333 33566789999776643333333334 455 4889999999999988
Q ss_pred HcCCCCC--CcCCCC--CCChHHHHHHHHHHHHhcCC
Q 026308 102 SRASVGP--TKGVDS--SHESMDAMEAARCLAEASGA 134 (240)
Q Consensus 102 ~g~~~~~--~~~~~~--~~~~~~~~~~a~~l~~~~~~ 134 (240)
++.-... ...++. ..+..+..+.+..|.++++.
T Consensus 300 ~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l 336 (455)
T 1ua4_A 300 MEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGV 336 (455)
T ss_dssp HHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCC
Confidence 7641100 000110 12367788888888887653
No 76
>2k2w_A Recombination and DNA repair protein; BRCT domain, cell cycle checkpoint; NMR {Xenopus laevis}
Probab=52.95 E-value=8.6 Score=27.18 Aligned_cols=65 Identities=9% Similarity=0.167 Sum_probs=41.4
Q ss_pred hhhHHHHHcCCCc-ccCCCCCchhhhhcccCcEEEecCCCCCC------hHHHHHHHHHHHHhcCCCEEEccc
Q 026308 3 LVANTLLSAGASP-AMLHTIEEIPDFTPHVRALYVNVGTLSAN------WLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 3 ~~a~~~~~~g~~~-~~~~~~~~~~~~~~~~d~vvi~~G~~~~~------~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
..+.+|...||.. ++.+...+ .+.+...+++|+..++-+.. +...+..+.+.+++.|.+.|-|.-
T Consensus 29 kl~~aV~~~GG~~~l~~e~~~~-~s~l~~~~tcVv~v~~t~SQ~~~~~s~~~wi~si~~~L~~~glR~IpEsE 100 (118)
T 2k2w_A 29 KLSPAVLFGGGKTDLLMGELKD-ASVLDNPATCVIDVAMTESQLSESQSTQPWITSTLDLLQSKGLRTIPEAE 100 (118)
T ss_dssp HHHHHHHHTTCEEECCSSGGGS-THHHHSTTEEEEECSGGGCCGGGTTTCSCCCCHHHHHHHHHTCCEEEHHH
T ss_pred HHHHHHHhcCceEEecccCCCc-hhhhcCCCeEEEEeCCCccceecCccchhhHHHHHHHHHHcCCccCCHHH
Confidence 3567888999999 44344444 67788889999986642111 111135566667777877776653
No 77
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=51.06 E-value=40 Score=28.07 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=35.8
Q ss_pred hhHHHHHcCCCcccC---CCCCchhhhhcccC--cEEE-ecCCCCC-----------ChHHHHHHHHHHHHhcCCC---E
Q 026308 4 VANTLLSAGASPAML---HTIEEIPDFTPHVR--ALYV-NVGTLSA-----------NWLPSMKAAAQLASQLGKP---W 63 (240)
Q Consensus 4 ~a~~~~~~g~~~~~~---~~~~~~~~~~~~~d--~vvi-~~G~~~~-----------~~~~~~~~~~~~~~~~~~~---v 63 (240)
+|...+..|+.-+.+ ...+++.+.+.+.+ +|++ ..|.+.. +..+.+.+.++.+.+.|++ +
T Consensus 117 Va~aAl~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~I 196 (314)
T 3tr9_A 117 VMREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRI 196 (314)
T ss_dssp HHHHHHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHE
Confidence 455666667655333 22234555555444 3333 2243322 1245566777788888885 9
Q ss_pred EEccc
Q 026308 64 VLDPV 68 (240)
Q Consensus 64 vlDp~ 68 (240)
++||-
T Consensus 197 ilDPG 201 (314)
T 3tr9_A 197 IIDPG 201 (314)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99994
No 78
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=48.20 E-value=23 Score=28.22 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=37.4
Q ss_pred hHHHHHcCCCcccCC--CCCchhhhhcccCcEEEecCCC-CC---------------ChH-HHHHHHHHHHHhcCCCEE
Q 026308 5 ANTLLSAGASPAMLH--TIEEIPDFTPHVRALYVNVGTL-SA---------------NWL-PSMKAAAQLASQLGKPWV 64 (240)
Q Consensus 5 a~~~~~~g~~~~~~~--~~~~~~~~~~~~d~vvi~~G~~-~~---------------~~~-~~~~~~~~~~~~~~~~vv 64 (240)
.+++..+|+.|++.. ...++.+.++.+|.+++..|-- ++ ... .....+++.+.+.++|++
T Consensus 34 ~~~l~~aG~~pv~lp~~~~~~~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 34 VDAIQKVGGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHHHHTCEEEEECCCCGGGHHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHCCCEEEEEeCCCchHHHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 457888999996552 2223666778999999966621 10 001 123456677777888875
No 79
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=45.20 E-value=58 Score=26.73 Aligned_cols=65 Identities=20% Similarity=0.103 Sum_probs=37.9
Q ss_pred hhHHHHHcCCCcccC---CCCCchhhhhcccCcEEEec---CCCCC-------------ChHHHHHHHHHHHHhcCCC--
Q 026308 4 VANTLLSAGASPAML---HTIEEIPDFTPHVRALYVNV---GTLSA-------------NWLPSMKAAAQLASQLGKP-- 62 (240)
Q Consensus 4 ~a~~~~~~g~~~~~~---~~~~~~~~~~~~~d~vvi~~---G~~~~-------------~~~~~~~~~~~~~~~~~~~-- 62 (240)
+|.+.|..|+.-+.+ ...+++.+.+.+.++-++-. |.+.. +..+.+.+.++.+.+.|++
T Consensus 109 Va~aAl~aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~ 188 (294)
T 2y5s_A 109 VMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAE 188 (294)
T ss_dssp HHHHHHHHTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChh
Confidence 455666667755433 22345566666666544421 22221 1255566777788888887
Q ss_pred -EEEccc
Q 026308 63 -WVLDPV 68 (240)
Q Consensus 63 -vvlDp~ 68 (240)
+|+||-
T Consensus 189 ~IilDPG 195 (294)
T 2y5s_A 189 RICVDPG 195 (294)
T ss_dssp GEEEECC
T ss_pred hEEEeCC
Confidence 999994
No 80
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=44.59 E-value=83 Score=24.59 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.+...++.+++.|+.+.+|=.+.+.+++ ..+....++.||-...=...+... .....+.+...
T Consensus 139 ~~~~~~l~~l~~~G~~ialDdfG~g~ssl-----~~L~~l~~d~iKiD~~~v~~~~~~-----------~~~~~~~~~i~ 202 (259)
T 3s83_A 139 ERAAVILKTLRDAGAGLALDDFGTGFSSL-----SYLTRLPFDTLKIDRYFVRTMGNN-----------AGSAKIVRSVV 202 (259)
T ss_dssp HHHHHHHHHHHHHTCEEEEECC---CHHH-----HHHHHSCCCEEEECHHHHHHTTTC-----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCchhH-----HHHHhCCCCEEEECHHHHhhhhcC-----------chHHHHHHHHH
Confidence 44566778889999999999877443222 222224689999887555444221 11234556666
Q ss_pred HHHHhcCCEEEEecCc
Q 026308 127 CLAEASGAIVAVSGAV 142 (240)
Q Consensus 127 ~l~~~~~~~VvitG~~ 142 (240)
.+++..+..||..|-.
T Consensus 203 ~~a~~~g~~viaeGVE 218 (259)
T 3s83_A 203 KLGQDLDLEVVAEGVE 218 (259)
T ss_dssp HHHHHTTCEEEECCCC
T ss_pred HHHHHCCCeEEEEeCC
Confidence 7788888889999864
No 81
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=44.58 E-value=48 Score=27.00 Aligned_cols=23 Identities=30% Similarity=0.271 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhcCCC---EEEccc
Q 026308 46 LPSMKAAAQLASQLGKP---WVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~---vvlDp~ 68 (240)
.+.+.+.++.+.+.|++ +|+||-
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg 179 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPG 179 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECC
Confidence 44555666777777776 888884
No 82
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=43.60 E-value=18 Score=30.30 Aligned_cols=43 Identities=5% Similarity=-0.042 Sum_probs=27.8
Q ss_pred CchhhhhcccCcEEEecCCC-CCC-hHHHHHHHHHHHHhcCCCEE
Q 026308 22 EEIPDFTPHVRALYVNVGTL-SAN-WLPSMKAAAQLASQLGKPWV 64 (240)
Q Consensus 22 ~~~~~~~~~~d~vvi~~G~~-~~~-~~~~~~~~~~~~~~~~~~vv 64 (240)
.++.+.+.++|+|+++||.+ ++- ..-.+..+.+..++...|+|
T Consensus 176 p~al~AI~~AD~IvlgPGSl~TSI~P~Llv~gi~~Ai~~s~A~kV 220 (326)
T 2q7x_A 176 RRVVQTILESDMIVLGPGSLFTSILPNIVIXEIGRALLETXAEIA 220 (326)
T ss_dssp SHHHHHHHHCSEEEECSSCCCCCCHHHHTSHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHhCCEEEECCCCCHHHHhhhhhhccHHHHHHhccCceE
Confidence 45667788999999999995 444 22223455555566655544
No 83
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=42.33 E-value=34 Score=23.73 Aligned_cols=43 Identities=21% Similarity=0.276 Sum_probs=31.2
Q ss_pred hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEE-Ecccc
Q 026308 26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWV-LDPVA 69 (240)
Q Consensus 26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vv-lDp~~ 69 (240)
+.++.++++++=.|.-+.. .+-+..-++.+++.++|+| +.|.+
T Consensus 34 ~~I~~~~~vIvL~G~~t~~-s~wv~~EI~~A~~~gkpIigV~~~g 77 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTR-RDEILGAVDLARKSSKPIITVRPYG 77 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTS-HHHHHHHHHHHTTTTCCEEEECCSS
T ss_pred CccccCCEEEEEeCCCcCC-ChHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4567899998867763322 3556778899999999976 57766
No 84
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=41.48 E-value=56 Score=26.65 Aligned_cols=65 Identities=14% Similarity=-0.008 Sum_probs=35.3
Q ss_pred hhHHHHHcCCCcccCC---CCCchhhhhcccCcEEEe---cCCCCC------------ChHHHHHHHHHHHHhcCCC---
Q 026308 4 VANTLLSAGASPAMLH---TIEEIPDFTPHVRALYVN---VGTLSA------------NWLPSMKAAAQLASQLGKP--- 62 (240)
Q Consensus 4 ~a~~~~~~g~~~~~~~---~~~~~~~~~~~~d~vvi~---~G~~~~------------~~~~~~~~~~~~~~~~~~~--- 62 (240)
++...+..|+.-+..- ..+++.+.+.+.++-++- .|.+.. +..+.+.+.++.+.+.|++
T Consensus 102 va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~ 181 (282)
T 1aj0_A 102 VIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEK 181 (282)
T ss_dssp HHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 4555666666554332 233455555555443331 233221 0145666777778888876
Q ss_pred EEEccc
Q 026308 63 WVLDPV 68 (240)
Q Consensus 63 vvlDp~ 68 (240)
+|+||-
T Consensus 182 IilDPg 187 (282)
T 1aj0_A 182 LLLDPG 187 (282)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 888984
No 85
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=40.13 E-value=20 Score=30.30 Aligned_cols=41 Identities=7% Similarity=0.010 Sum_probs=22.9
Q ss_pred chhhhhcccCcEEEecCCC-CCC-hHHHHHHHHHHHHhcCCCE
Q 026308 23 EIPDFTPHVRALYVNVGTL-SAN-WLPSMKAAAQLASQLGKPW 63 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~-~~~-~~~~~~~~~~~~~~~~~~v 63 (240)
++.+.+.++|+|+++||.+ ++- +.-.+..+.+..++...|+
T Consensus 181 ~al~AI~~AD~IvlgPGSlyTSI~P~Llv~gi~~Ai~~s~A~k 223 (341)
T 2p0y_A 181 PVIDAIMAADQIVLGPGSLFTSILPNLTIGNIGRAVCESDAEV 223 (341)
T ss_dssp HHHHHHHHCSEEEECSSCCCCCCHHHHSSHHHHHHHHHCSSEE
T ss_pred HHHHHHHhCCEEEECCCCCHHHhcccccCccHHHHHHhCCCCE
Confidence 3556677888888888885 433 2222234444444444443
No 86
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=39.01 E-value=87 Score=24.33 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.+...++.+++.|+.+.+|=.+.+.+++ ..+....++.||-...=...+... .....+.+...
T Consensus 143 ~~~~~~l~~L~~~G~~ialDdfG~g~s~l-----~~L~~l~~d~iKiD~~~v~~~~~~-----------~~~~~~l~~i~ 206 (250)
T 4f3h_A 143 RNAQQFLASVSAMGCKVGLEQFGSGLDSF-----QLLAHFQPAFLKLDRSITGDIASA-----------RESQEKIREIT 206 (250)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEETSSTHHH-----HHHTTSCCSEEEECHHHHTTTTTC-----------SHHHHHHHHTH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCchHH-----HHHhhCCCCEEEECHHHHHhHhcC-----------hhhHHHHHHHH
Confidence 34567778889999999999877443221 223324589999875432222111 12234555666
Q ss_pred HHHHhcCCEEEEecCc
Q 026308 127 CLAEASGAIVAVSGAV 142 (240)
Q Consensus 127 ~l~~~~~~~VvitG~~ 142 (240)
.+++..+..||..|-.
T Consensus 207 ~~a~~l~~~viaeGVE 222 (250)
T 4f3h_A 207 SRAQPTGILTVAEFVA 222 (250)
T ss_dssp HHHHHHTCEEEECCCC
T ss_pred HHHHHcCCEEEEeccC
Confidence 7777888889999863
No 87
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=38.29 E-value=20 Score=29.93 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=31.8
Q ss_pred CCCchhhhhc-ccCcEEEecCCCCCC----hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTP-HVRALYVNVGTLSAN----WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~~G~~~~~----~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+. +..++++.+-.+... ..+.++++.+.++++++++|+|-.-
T Consensus 172 d~~~l~~~l~~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~ 226 (406)
T 4adb_A 172 DINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQ 226 (406)
T ss_dssp CHHHHHTTCSTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cHHHHHHHhcCCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 3444554443 344566543223222 3466788999999999999999765
No 88
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=37.96 E-value=28 Score=29.21 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=28.1
Q ss_pred chhhhhcccCcEEEecCCC-CCC-hHHHHHHHHHHHHhcCCCEE-Eccc
Q 026308 23 EIPDFTPHVRALYVNVGTL-SAN-WLPSMKAAAQLASQLGKPWV-LDPV 68 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~-~~~-~~~~~~~~~~~~~~~~~~vv-lDp~ 68 (240)
++.+.+..+|+|+++||.+ ++- ..-.+..+.+..++...|+| +-+.
T Consensus 170 ~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV~v~N~ 218 (332)
T 2ppv_A 170 EAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNV 218 (332)
T ss_dssp HHHHHHHHCSEEEECSSCCCCCCHHHHTSHHHHHHHHHCCSCEEEECCS
T ss_pred HHHHHHHhCCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEEEEcCC
Confidence 5566778999999999985 443 22223455555566655544 3443
No 89
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=37.88 E-value=22 Score=28.61 Aligned_cols=59 Identities=14% Similarity=0.223 Sum_probs=37.5
Q ss_pred HcCCCccc-CCCCCchhhhhcccCcEEEe-cCCC--CCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 10 SAGASPAM-LHTIEEIPDFTPHVRALYVN-VGTL--SANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 10 ~~g~~~~~-~~~~~~~~~~~~~~d~vvi~-~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
++|--|.- .+..++..+.+....++.|| .|+. .+.+.+.++..++.+++.+.|+++=..
T Consensus 69 ~~GiHP~~~~~~~~~~~~~l~~~~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r 131 (261)
T 3guw_A 69 AVGIHPRCIPPDYEFVLGYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTP 131 (261)
T ss_dssp BCCCCGGGCCTTTHHHHHHHTTSCCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EEEECcccccccHHHHHHHhCcCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcC
Confidence 34555532 23344445556555666664 5552 344667788889999999999999553
No 90
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=36.45 E-value=24 Score=29.19 Aligned_cols=50 Identities=12% Similarity=0.067 Sum_probs=30.7
Q ss_pred CCCchhhhhc--ccCcEEEe-cCCCCCC--hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTP--HVRALYVN-VGTLSAN--WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~-~G~~~~~--~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.++ +..++++. +..+... ..+.+.++.+.++++++++|+|-.-
T Consensus 148 d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 202 (391)
T 3dzz_A 148 NWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIH 202 (391)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3445555554 44555553 2112211 1255788899999999999999864
No 91
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.97 E-value=80 Score=25.94 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
..+.+.++.+.|+++|+|+++|+.+
T Consensus 140 ~~~~i~~v~~~~~~~G~p~lv~~~~ 164 (304)
T 1to3_A 140 RLNMVKEFNELCHSNGLLSIIEPVV 164 (304)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEC
Confidence 4566678888999999999999764
No 92
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=35.68 E-value=1.4e+02 Score=24.73 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.+...++.+++.|+.+.+|=.+.+.+++.. +....++.||-...=...+... .....+.+..-
T Consensus 212 ~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~-----L~~lp~d~iKID~sfv~~~~~~-----------~~~~~iv~~ii 275 (340)
T 4hjf_A 212 ERAAVILKTLRDAGAGLALDDFGTGFSSLSY-----LTRLPFDTLKIDRYFVRTMGNN-----------AGSAKIVRSVV 275 (340)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTSSSCGGGT-----GGGSCCSEEEECHHHHHHTTTC-----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccccCCCCCcchHHH-----HHhCCCChhcccHHhhhcccCC-----------HhHHHHHHHHH
Confidence 4456777888999999999998866555431 2224689999876544333211 11234566666
Q ss_pred HHHHhcCCEEEEecCc
Q 026308 127 CLAEASGAIVAVSGAV 142 (240)
Q Consensus 127 ~l~~~~~~~VvitG~~ 142 (240)
.+++..+..||..|-.
T Consensus 276 ~la~~lg~~vvAEGVE 291 (340)
T 4hjf_A 276 KLGQDLDLEVVAEGVE 291 (340)
T ss_dssp HHHHHHTCEEEEECCC
T ss_pred HHHHHcCCEEEEEeCC
Confidence 7888889889988864
No 93
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=35.00 E-value=1.3e+02 Score=24.60 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=38.7
Q ss_pred chhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCC
Q 026308 23 EIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGN 94 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN 94 (240)
.+.+.+..+|+++- .-. .+.....++.+.++|+++|+=..+. +....+.+.++.+..+.++.||
T Consensus 81 dl~~ll~~aDVvID-FT~-----p~a~~~~~~~~l~~Gv~vViGTTG~--~~e~~~~L~~aa~~~~~~~a~N 144 (288)
T 3ijp_A 81 DPESAFSNTEGILD-FSQ-----PQASVLYANYAAQKSLIHIIGTTGF--SKTEEAQIADFAKYTTIVKSGN 144 (288)
T ss_dssp CHHHHTTSCSEEEE-CSC-----HHHHHHHHHHHHHHTCEEEECCCCC--CHHHHHHHHHHHTTSEEEECSC
T ss_pred CHHHHhcCCCEEEE-cCC-----HHHHHHHHHHHHHcCCCEEEECCCC--CHHHHHHHHHHhCcCCEEEECC
Confidence 45566678998763 221 2445566778889999999866551 1111122344443456899999
No 94
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=34.26 E-value=45 Score=29.34 Aligned_cols=47 Identities=11% Similarity=0.081 Sum_probs=34.2
Q ss_pred chhhhhcccCcEEEecC-----CCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 23 EIPDFTPHVRALYVNVG-----TLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G-----~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
.+.+++..+|.++++.| ++.+......++++..|++.|+|+++=.-+
T Consensus 239 nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQM 290 (461)
T 3qtg_A 239 NLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQL 290 (461)
T ss_dssp THHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSS
T ss_pred hHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccc
Confidence 35667778999999533 344455566688999999999999984444
No 95
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=34.08 E-value=23 Score=29.01 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCCEEEcccc
Q 026308 49 MKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 49 ~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++.+.++++++++|+|-.-
T Consensus 166 ~~~i~~~~~~~~~~li~D~a~ 186 (371)
T 2e7j_A 166 VKKIAKVCSEYDVPLLVNGAY 186 (371)
T ss_dssp HHHHHHHHHTTTCCEEEECTT
T ss_pred HHHHHHHHHHcCCeEEEECcc
Confidence 377888899999999999854
No 96
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=33.71 E-value=36 Score=27.61 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhcCCCEEEccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
.+.++++.+.++++++++|+|..
T Consensus 159 ~~~l~~i~~~~~~~~~~li~D~a 181 (356)
T 1v72_A 159 LDEIEAIGDVCKSSSLGLHMDGS 181 (356)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEET
T ss_pred HHHHHHHHHHHHHcCCeEEEEch
Confidence 46678899999999999999964
No 97
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=33.23 E-value=29 Score=28.70 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=29.6
Q ss_pred CCchhhhhcccCcEEEe-cCCCCCC--hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTPHVRALYVN-VGTLSAN--WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~~~d~vvi~-~G~~~~~--~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.++...++++. +..+... ..+.+.++.+.++++++++|+|-.-
T Consensus 155 ~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 206 (391)
T 4dq6_A 155 YEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIH 206 (391)
T ss_dssp HHHHHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccc
Confidence 34455555444455542 2112111 1245788889999999999999764
No 98
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=32.55 E-value=44 Score=21.86 Aligned_cols=23 Identities=17% Similarity=0.070 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
..-.++++.++++|+|++=||..
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHH
Confidence 44578889999999999999975
No 99
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=32.52 E-value=32 Score=26.37 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=30.1
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR 76 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~ 76 (240)
+.+.++++-.|.+. .+..+++.+++.+++++|.++.+...+.+
T Consensus 30 s~~~~ifll~g~I~-----~L~~iv~~ik~~gK~vivh~DlI~GLs~d 72 (188)
T 1vkf_A 30 IEPDVVFLLKSDIL-----NLKFHLKILKDRGKTVFVDMDFVNGLGEG 72 (188)
T ss_dssp CCSSEEEECCEETT-----THHHHHHHHHHTTCEEEEEGGGEETCCSS
T ss_pred CCCCEEEEEeCcHH-----HHHHHHHHHHHCCCeEEEecCcccccCCC
Confidence 45667766445552 15778888899999999999987654433
No 100
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=32.46 E-value=23 Score=31.82 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=34.6
Q ss_pred chhhhhcccCcEEEecC---C--CCCChHHHHHHHHHHHHhcCCCEEEcccccC
Q 026308 23 EIPDFTPHVRALYVNVG---T--LSANWLPSMKAAAQLASQLGKPWVLDPVAAG 71 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G---~--~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~ 71 (240)
.+.++++.+|.+++.=| . +.+.....-+.+++.|++.++|||+-.-+..
T Consensus 279 NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLe 332 (526)
T 4drs_A 279 NFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLE 332 (526)
T ss_dssp THHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTG
T ss_pred HHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhH
Confidence 35677789999999433 2 3333334447899999999999998665544
No 101
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=32.22 E-value=95 Score=25.11 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.+...++.+++.|+.+.+|=.+.+.+++. .+....++.||-...=...+... .....+.+...
T Consensus 163 ~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~-----~L~~l~~d~iKID~sfv~~i~~~-----------~~~~~iv~~ii 226 (294)
T 2r6o_A 163 DEVRTCLDALRARGVRLALDDFGTGYSSLS-----YLSQLPFHGLKIDQSFVRKIPAH-----------PSETQIVTTIL 226 (294)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETSSCBCHH-----HHHHSCCCEEEECHHHHTTTTTS-----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCchhHH-----HHHhCCCCEEEECHHHHhhhhcC-----------hHHHHHHHHHH
Confidence 445677888999999999998875544432 12223688998775433222110 11234556666
Q ss_pred HHHHhcCCEEEEecCc
Q 026308 127 CLAEASGAIVAVSGAV 142 (240)
Q Consensus 127 ~l~~~~~~~VvitG~~ 142 (240)
.+++..+..||..|-.
T Consensus 227 ~la~~lg~~vvAEGVE 242 (294)
T 2r6o_A 227 ALARGLGMEVVAEGIE 242 (294)
T ss_dssp HHHHHTTCEEEECCCC
T ss_pred HHHHHCCCEEEEecCC
Confidence 7888888889999864
No 102
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=31.94 E-value=15 Score=32.08 Aligned_cols=50 Identities=8% Similarity=0.051 Sum_probs=30.2
Q ss_pred CCCchhhhhcccC-------cEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPHVR-------ALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~~d-------~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++.+++.+.... .|++..|.......+-+.++.+.++++++++++|..-
T Consensus 218 d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~ 274 (486)
T 1js3_A 218 RASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAY 274 (486)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhh
Confidence 3445555554322 5555545421112344578888899999999999753
No 103
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=31.54 E-value=1.3e+02 Score=24.18 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=29.3
Q ss_pred ccCcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEccc
Q 026308 30 HVRALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPV 68 (240)
Q Consensus 30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~ 68 (240)
.+|.+=||.+....+..+.+..+++..++. ++|+.+|..
T Consensus 47 GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~ 86 (271)
T 2yci_X 47 GAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDST 86 (271)
T ss_dssp TCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred CCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 578888887765555567777777777655 899999985
No 104
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=31.53 E-value=33 Score=23.60 Aligned_cols=42 Identities=12% Similarity=-0.005 Sum_probs=27.0
Q ss_pred chhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEE-Ecccc
Q 026308 23 EIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWV-LDPVA 69 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vv-lDp~~ 69 (240)
++.+.++.+|+++++|=+. -.+.++-+.+.+.++||. +|+..
T Consensus 46 ~~~~~~~~~DvvLLgPQV~-----y~~~~ik~~~~~~~ipV~vI~~~~ 88 (108)
T 3nbm_A 46 AHYDIMGVYDLIILAPQVR-----SYYREMKVDAERLGIQIVATRGME 88 (108)
T ss_dssp SCTTTGGGCSEEEECGGGG-----GGHHHHHHHHTTTTCEEEECCHHH
T ss_pred HHHhhccCCCEEEEChHHH-----HHHHHHHHHhhhcCCcEEEeCHHH
Confidence 4555667899999875442 123455555667788876 57765
No 105
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=30.88 E-value=54 Score=27.75 Aligned_cols=61 Identities=13% Similarity=0.038 Sum_probs=36.3
Q ss_pred EEEecCC--CCCC---hHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHh-ccCCeEEcCC
Q 026308 34 LYVNVGT--LSAN---WLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELV-QLKPTVIRGN 94 (240)
Q Consensus 34 vvi~~G~--~~~~---~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~-~~~~~vitPN 94 (240)
..+++|+ .... .+..++++++.+++.+.+|++|..-.+-+..-....+.++ ...+|.+|-|
T Consensus 130 ~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~g~~VflDlK~~DIgnTva~ya~a~~~~lgaD~vTVh 196 (353)
T 2ffc_A 130 LAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTAN 196 (353)
T ss_dssp SEEEEEGGGGSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred ceeeccHHHHHhcCHHHHHHHHHHHHHHHHcCCcEEEEEecCchHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4466666 2222 2345677788889889999999976553322222233333 2456777766
No 106
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=30.77 E-value=18 Score=29.80 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=29.4
Q ss_pred CCCchhhhhcc--cCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPH--VRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~--~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+.. ...+++.... +.... .-++++.+.++++++++|+|-.-
T Consensus 159 d~~~l~~~i~~~~~~~v~~~~~~nptG~~-~~l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 159 DEKFVKDAVEDYDVDGIIGIAGTTELGTI-DNIEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp CHHHHHHHHHHSCCCEEEEEBSCTTTCCB-CCHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHhhcCCeEEEEECCCCCCCCC-CCHHHHHHHHHHhCCeEEEEccc
Confidence 44455555543 4555553322 22221 22577888899999999999864
No 107
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=30.04 E-value=40 Score=28.15 Aligned_cols=46 Identities=7% Similarity=0.088 Sum_probs=30.3
Q ss_pred CCCchhhhhc--ccCcEEEec-CCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP--HVRALYVNV-GTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~~-G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.+. +..++++.. ..+.... ++++.+.++++|+++|+|-.
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~~~~~~---l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAYPRKLD---FARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCCCSCCC---HHHHHHHHHHHTCEEEEECG
T ss_pred CHHHHHHHHhhcCCcEEEEccccCCCcCC---HHHHHHHHHHcCCEEEEECc
Confidence 4455555553 566777752 2233333 36778889999999999987
No 108
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=29.97 E-value=31 Score=29.74 Aligned_cols=28 Identities=11% Similarity=0.077 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
+.+.++.+++.|+++|+.||+|-+.-+.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 3577899999999999999999987654
No 109
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=29.68 E-value=47 Score=28.32 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=30.4
Q ss_pred CCCchhhhhc-----ccCcEEEec------CCCCCChHHHHHHHHHHHHhcCCCEEEcc
Q 026308 20 TIEEIPDFTP-----HVRALYVNV------GTLSANWLPSMKAAAQLASQLGKPWVLDP 67 (240)
Q Consensus 20 ~~~~~~~~~~-----~~d~vvi~~------G~~~~~~~~~~~~~~~~~~~~~~~vvlDp 67 (240)
+++++++.+. +..+|++.+ |.+. ..+.++++.+.|+++|+++|+|.
T Consensus 168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~--~~~~l~~i~~la~~~gi~li~D~ 224 (467)
T 2oqx_A 168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPV--SLANLKAMYSIAKKYDIPVVMDS 224 (467)
T ss_dssp CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCC--CHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHhcCCCceeEEEEeccccCCCCccC--CHHHHHHHHHHHHHcCCEEEEEc
Confidence 3445566654 455666632 3221 24667889999999999999993
No 110
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=29.36 E-value=34 Score=31.13 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=36.0
Q ss_pred chhhhhcccCcEEEecC-----CCCCChHHHHHHHHHHHHhcCCCEEEcccccC
Q 026308 23 EIPDFTPHVRALYVNVG-----TLSANWLPSMKAAAQLASQLGKPWVLDPVAAG 71 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G-----~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~ 71 (240)
.+.++++.+|.++++.| ++.++.....+++++.|++.|+|+++-.-|..
T Consensus 230 nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLe 283 (587)
T 2e28_A 230 NIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLD 283 (587)
T ss_dssp THHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSG
T ss_pred hHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhH
Confidence 35667778899999765 23344455668899999999999999665543
No 111
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=29.19 E-value=32 Score=29.06 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=31.3
Q ss_pred CCCchhhhhc--ccCcEEEecC-CCCCC--hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTP--HVRALYVNVG-TLSAN--WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~~G-~~~~~--~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++.+++.+. +..++++..- .+... ..+.++++.+.|+++++.+|+|-+-
T Consensus 182 d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~ 236 (421)
T 3l8a_A 182 DFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIH 236 (421)
T ss_dssp CHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 4556666664 4555555311 11111 1255788999999999999999873
No 112
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=28.74 E-value=56 Score=28.00 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=32.0
Q ss_pred chhhhhcccCcEEEecCCCCCCh--HHHHHHHHHHHHhcCCCEEEcc
Q 026308 23 EIPDFTPHVRALYVNVGTLSANW--LPSMKAAAQLASQLGKPWVLDP 67 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~~~~~--~~~~~~~~~~~~~~~~~vvlDp 67 (240)
.+++.++.+|.|+.+-|-++.++ =+....+.+.++++++|||+=.
T Consensus 280 ~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~gVa~~A~~~~vPviaia 326 (383)
T 3cwc_A 280 HLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIA 326 (383)
T ss_dssp THHHHHHHCSEEEECCEESCC----CHHHHHHHHHHHHTTCCEEEEE
T ss_pred ChHhhhcCCCEEEECCCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 46778889999998877654432 1334567788999999998743
No 113
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=28.68 E-value=1.1e+02 Score=24.65 Aligned_cols=64 Identities=13% Similarity=-0.035 Sum_probs=38.5
Q ss_pred chhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCC
Q 026308 23 EIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGN 94 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN 94 (240)
.+.+.+..+|+++--+ + .+.....++.+.++|+++|+=..+. +......+.++.+..+.++.||
T Consensus 66 dl~~ll~~~DVVIDfT--~----p~a~~~~~~~al~~G~~vVigTTG~--s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 66 DIERVCAEADYLIDFT--L----PEGTLVHLDAALRHDVKLVIGTTGF--SEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp CHHHHHHHCSEEEECS--C----HHHHHHHHHHHHHHTCEEEECCCCC--CHHHHHHHHHHTTTSEEEECSC
T ss_pred CHHHHhcCCCEEEEcC--C----HHHHHHHHHHHHHcCCCEEEECCCC--CHHHHHHHHHHhccCCEEEECC
Confidence 4555667899887532 1 2445667778889999999855441 1111112333433456899999
No 114
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=28.54 E-value=41 Score=27.87 Aligned_cols=49 Identities=10% Similarity=0.214 Sum_probs=30.1
Q ss_pred CCCchhhhhc--ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccccc
Q 026308 20 TIEEIPDFTP--HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
+++++++.++ +..++++. +|...+ .+.++++.+.++++++++|+|-.-.
T Consensus 150 d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~--~~~l~~l~~~~~~~~~~li~De~~~ 205 (390)
T 1d2f_A 150 DMGKLEAVLAKPECKIMLLCSPQNPTGKVWT--CDELEIMADLCERHGVRVISDEIHM 205 (390)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSCTTTCCCCC--TTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CHHHHHHHhccCCCeEEEEeCCCCCCCcCcC--HHHHHHHHHHHHHcCCEEEEEcccc
Confidence 3445555554 34556552 243211 1345788888999999999997643
No 115
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=28.49 E-value=39 Score=28.88 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
.+.++++.+.|+++|+++|+|..
T Consensus 203 ~~~l~~i~~la~~~gi~li~De~ 225 (467)
T 1ax4_A 203 MSNLKEVYEIAKQHGIFVVMDSA 225 (467)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECT
T ss_pred hhHHHHHHHHHHHcCCEEEEEch
Confidence 46678899999999999999964
No 116
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=28.35 E-value=73 Score=26.13 Aligned_cols=63 Identities=5% Similarity=-0.078 Sum_probs=37.0
Q ss_pred cEEEecCC--CCCC---hHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCH
Q 026308 33 ALYVNVGT--LSAN---WLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNA 95 (240)
Q Consensus 33 ~vvi~~G~--~~~~---~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~ 95 (240)
+..+++|+ .... .++.++++++.+++.+.+|++|..-.+-+..-....+.+++ ..+|.+|-|.
T Consensus 60 v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~g~~VflDlK~~DIpnTv~~~a~~~~~~~lg~D~vTvh~ 129 (290)
T 3r89_A 60 CAIYKLQIAYYESYGIEGMIAYRDTLSYLREKDLLSIGDVKRSDIAASAKMYAKAHFEGDFETDFITLNP 129 (290)
T ss_dssp CSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHHHHSGGGCCSEEEECC
T ss_pred ceEEEecHHHHHhcCHHHHHHHHHHHHHHHHCCCeEEEEecccCcHHHHHHHHHHHhccccCCCEEEEcc
Confidence 44667776 2222 23455667788888999999999765432211122334443 3478888773
No 117
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=28.19 E-value=18 Score=31.82 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=29.8
Q ss_pred CCchhhhhcc-------cCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTPH-------VRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~~-------~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.+.. ..+|++..|. +... ++-++.+.+.++++++++++|..-
T Consensus 243 ~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~-i~~l~~I~~la~~~g~~l~vD~a~ 298 (515)
T 2jis_A 243 PEDLERQIGMAEAEGAVPFLVSATSGTTVLGA-FDPLEAIADVCQRHGLWLHVDAAW 298 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCC-BCCHHHHHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCC-ccCHHHHHHHHHHcCCeEEEehhh
Confidence 4455555543 3455655443 2221 233577888899999999999974
No 118
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=28.14 E-value=49 Score=28.55 Aligned_cols=49 Identities=6% Similarity=0.024 Sum_probs=31.1
Q ss_pred CCCchhhhhc---ccCcEEEec--CCCCC--ChHHHHHHHHHHHHh--cCCCEEEccc
Q 026308 20 TIEEIPDFTP---HVRALYVNV--GTLSA--NWLPSMKAAAQLASQ--LGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~---~~d~vvi~~--G~~~~--~~~~~~~~~~~~~~~--~~~~vvlDp~ 68 (240)
+++++++.++ +...|++.. |++++ ....-++++.+.+++ +++++++|-.
T Consensus 163 d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a 220 (427)
T 3hvy_A 163 DINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNC 220 (427)
T ss_dssp CHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3445555554 456777754 22211 234556888889998 8999999965
No 119
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=27.80 E-value=97 Score=23.35 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=33.5
Q ss_pred hhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCC-hHHHHH--HHHHHHHhcCCCEE
Q 026308 3 LVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSAN-WLPSMK--AAAQLASQLGKPWV 64 (240)
Q Consensus 3 ~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~-~~~~~~--~~~~~~~~~~~~vv 64 (240)
.+++++--+|+.+....++++ +..+|.+++ ||--+.. ..+.+. .+++.+++.++|++
T Consensus 17 si~~al~~~G~~~~v~~~~~~----l~~~D~lil-PG~g~~~~~~~~~~~~~~i~~~~~~~~Pvl 76 (211)
T 4gud_A 17 SVKFAIERLGYAVTISRDPQV----VLAADKLFL-PGVGTASEAMKNLTERDLIELVKRVEKPLL 76 (211)
T ss_dssp HHHHHHHHTTCCEEEECCHHH----HHHCSEEEE-CCCSCHHHHHHHHHHTTCHHHHHHCCSCEE
T ss_pred HHHHHHHHCCCEEEEECCHHH----HhCCCEEEE-CCCCCHHHHHHHHHhcChHHHHHHcCCCEE
Confidence 467888999999976655443 456899998 5632211 111111 13455566777763
No 120
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=27.61 E-value=37 Score=28.80 Aligned_cols=24 Identities=8% Similarity=0.062 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
.+.+.++++.++++++.+|+|-.-
T Consensus 210 ~~~l~~l~~~~~~~~~~li~Dea~ 233 (435)
T 3piu_A 210 RNELYLLLSFVEDKGIHLISDEIY 233 (435)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEeccc
Confidence 355788888999999999999763
No 121
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=27.46 E-value=18 Score=31.73 Aligned_cols=50 Identities=8% Similarity=-0.022 Sum_probs=30.0
Q ss_pred CCCchhhhhcc-------cCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPH-------VRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~-------~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+.. ...|++..|......++-++++.+.++++++.+++|..-
T Consensus 228 d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~ 284 (504)
T 2okj_A 228 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW 284 (504)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhh
Confidence 34455555543 334555444311111233577888899999999999974
No 122
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=27.13 E-value=1.4e+02 Score=24.51 Aligned_cols=23 Identities=22% Similarity=0.423 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhcCCC---EEEccc
Q 026308 46 LPSMKAAAQLASQLGKP---WVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~---vvlDp~ 68 (240)
.+.+.+.++.+.+.|++ +++||-
T Consensus 181 ~~~l~~~i~~a~~~GI~~~~IilDPg 206 (297)
T 1tx2_A 181 IADLYDSIKIAKDAGVRDENIILDPG 206 (297)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHHcCCChhcEEEeCC
Confidence 35556667777778876 888884
No 123
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=27.05 E-value=2.1e+02 Score=22.23 Aligned_cols=19 Identities=11% Similarity=-0.193 Sum_probs=9.4
Q ss_pred HHHHHHHHhcCCCEEEccc
Q 026308 50 KAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 50 ~~~~~~~~~~~~~vvlDp~ 68 (240)
.++++.+++.+.++++|..
T Consensus 119 ~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 119 EALLARIHHHHLLTMADCS 137 (232)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEeCC
Confidence 3444445555555555543
No 124
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=27.02 E-value=36 Score=28.56 Aligned_cols=63 Identities=10% Similarity=0.113 Sum_probs=37.6
Q ss_pred HHHHHcCCCcccC--CCCCchhhhhcc--cCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 6 NTLLSAGASPAML--HTIEEIPDFTPH--VRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 6 ~~~~~~g~~~~~~--~~~~~~~~~~~~--~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++...|+.+.-. .+++++++.+.. ..++++.+-. +...... ++++.+.++++++.+|+|-.-
T Consensus 158 ~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~-l~~l~~la~~~~~~li~De~~ 225 (409)
T 3kki_A 158 EGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP-LAELVNISKEFGCALLVDESH 225 (409)
T ss_dssp HHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC-HHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC-HHHHHHHHHHcCCEEEEECCc
Confidence 4555667666333 456666666653 4556654211 1111111 578888899999999999864
No 125
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.41 E-value=48 Score=27.88 Aligned_cols=49 Identities=10% Similarity=0.053 Sum_probs=30.0
Q ss_pred CCchhhhh--cccCcEEE-ecCCCCCC--hHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFT--PHVRALYV-NVGTLSAN--WLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~--~~~d~vvi-~~G~~~~~--~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.+ .+..++++ .+..+... ..+.+.++++.++++++.+|+|-.-
T Consensus 171 ~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~ 224 (437)
T 3g0t_A 171 REKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAY 224 (437)
T ss_dssp HHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcch
Confidence 34455555 24556655 32222111 2355788889999999999999864
No 126
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=26.40 E-value=56 Score=28.21 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=30.9
Q ss_pred CCCchhhhhc---ccCcEEEec--CCCCC--ChHHHHHHHHHHHHh--cCCCEEEccc
Q 026308 20 TIEEIPDFTP---HVRALYVNV--GTLSA--NWLPSMKAAAQLASQ--LGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~---~~d~vvi~~--G~~~~--~~~~~~~~~~~~~~~--~~~~vvlDp~ 68 (240)
+++++++.++ +...|++.. |.+++ ..+.-+.++.+.+++ +++++++|-.
T Consensus 163 D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 163 NLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp CHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3445555554 445666653 22211 234567888889999 8999999965
No 127
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=26.26 E-value=49 Score=27.12 Aligned_cols=48 Identities=13% Similarity=0.161 Sum_probs=30.4
Q ss_pred CCCchhhhhc-ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTP-HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+. +..++++. +|... ..+.+.++++.++++++++|+|-.-
T Consensus 145 d~~~l~~~l~~~~~~v~i~~p~nptG~~~--~~~~l~~l~~~~~~~~~~li~De~~ 198 (383)
T 3kax_A 145 DFEHLEKQFQQGVKLMLLCSPHNPIGRVW--KKEELTKLGSLCTKYNVIVVADEIH 198 (383)
T ss_dssp CHHHHHHHHTTTCCEEEEESSBTTTTBCC--CHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred cHHHHHHHhCcCCeEEEEeCCCCCCCcCc--CHHHHHHHHHHHHHCCCEEEEEccc
Confidence 3445555553 45566553 23321 2356788888899999999999753
No 128
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=26.08 E-value=45 Score=28.13 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEccccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
.+.++++++.++++++++|+|-.-.
T Consensus 207 ~~~l~~l~~~~~~~~~~li~Dea~~ 231 (428)
T 1iay_A 207 KDTLKSVLSFTNQHNIHLVCDEIYA 231 (428)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECTTG
T ss_pred HHHHHHHHHHHHHCCeEEEEecccc
Confidence 3557888888889999999987653
No 129
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=26.00 E-value=32 Score=28.75 Aligned_cols=42 Identities=12% Similarity=-0.007 Sum_probs=24.1
Q ss_pred chhhhhcccCcEEEecCCC-CCC-hHHHHHHHHHHHHhcCCCEE
Q 026308 23 EIPDFTPHVRALYVNVGTL-SAN-WLPSMKAAAQLASQLGKPWV 64 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~G~~-~~~-~~~~~~~~~~~~~~~~~~vv 64 (240)
++.+.+..+|+|+++||.+ ++- ..-.+..+.+..++...|+|
T Consensus 171 ~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV 214 (323)
T 2o2z_A 171 EGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKV 214 (323)
T ss_dssp HHHHHHHHCSEEEECSSCTTTTHHHHHTSTTHHHHHHHCCSEEE
T ss_pred HHHHHHHhCCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEE
Confidence 4566778899999999985 322 11112334444455555443
No 130
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=25.99 E-value=22 Score=29.30 Aligned_cols=63 Identities=22% Similarity=0.286 Sum_probs=35.5
Q ss_pred HHHHHcCCCcccC-------CCCCchhhhh---cccCcEEEecC-CCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 6 NTLLSAGASPAML-------HTIEEIPDFT---PHVRALYVNVG-TLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 6 ~~~~~~g~~~~~~-------~~~~~~~~~~---~~~d~vvi~~G-~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+.+...|+.+... .+++++++.+ ++..++++... .+.... .-++++.+.++++++++|+|-.-
T Consensus 112 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~-~~l~~i~~l~~~~~~~li~D~a~ 185 (386)
T 2dr1_A 112 EVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVL-NPLPELAKVAKEHDKLVFVDAVS 185 (386)
T ss_dssp HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE-CCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchh-CCHHHHHHHHHHcCCeEEEEccc
Confidence 3444566655322 2344555555 24566666421 121111 12477888899999999999863
No 131
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=25.86 E-value=44 Score=27.82 Aligned_cols=62 Identities=10% Similarity=0.250 Sum_probs=34.7
Q ss_pred HHHHcCCCcccC--CCCCchhhhhc-----ccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 7 TLLSAGASPAML--HTIEEIPDFTP-----HVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 7 ~~~~~g~~~~~~--~~~~~~~~~~~-----~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++...|+..... ++.+.+++.++ +..++++..-. +.....+ ++++.+.++++++++|+|-.-
T Consensus 148 ~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~-l~~i~~l~~~~~~~li~Dea~ 217 (401)
T 2bwn_A 148 GIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP-IKEICDIAEEFGALTYIDEVH 217 (401)
T ss_dssp HHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC-HHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC-HHHHHHHHHHcCCEEEEeccc
Confidence 344556665322 34555665554 33455553211 2221111 477888889999999999865
No 132
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.86 E-value=48 Score=22.24 Aligned_cols=23 Identities=26% Similarity=0.250 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
....++++.+++.|+|++=||..
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHH
Confidence 34578889999999999999975
No 133
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.84 E-value=2.3e+02 Score=21.97 Aligned_cols=18 Identities=11% Similarity=-0.125 Sum_probs=8.3
Q ss_pred HHHHHHHHhcCCCEEEcc
Q 026308 50 KAAAQLASQLGKPWVLDP 67 (240)
Q Consensus 50 ~~~~~~~~~~~~~vvlDp 67 (240)
.++++.+++.+.++++|.
T Consensus 119 ~~~i~~~~~~g~~v~~~v 136 (229)
T 3q58_A 119 DSLLTRIRLHGLLAMADC 136 (229)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEec
Confidence 334444444455555444
No 134
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=25.68 E-value=47 Score=27.57 Aligned_cols=48 Identities=10% Similarity=0.116 Sum_probs=30.2
Q ss_pred CCchhhhhc--ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccccc
Q 026308 21 IEEIPDFTP--HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 21 ~~~~~~~~~--~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
++++++.++ +..++++. +|..- ..+.++++++.++++++++|+|-.-.
T Consensus 153 ~~~l~~~l~~~~~~~v~~~~~~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~ 207 (399)
T 1c7n_A 153 FQKLEKLSKDKNNKALLFCSPHNPVGRVW--KKDELQKIKDIVLKSDLMLWSDEIHF 207 (399)
T ss_dssp HHHHHHHHTCTTEEEEEEESSBTTTTBCC--CHHHHHHHHHHHHHSSCEEEEECTTT
T ss_pred HHHHHHHhccCCCcEEEEcCCCCCCCcCc--CHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 344555554 34556552 23321 23567888999999999999997643
No 135
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=25.52 E-value=43 Score=28.12 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=29.1
Q ss_pred Cchhhhh-cccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 22 EEIPDFT-PHVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 22 ~~~~~~~-~~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++.+ .+..++++. +|... ..+.+.++++.++++++++|+|-.-
T Consensus 172 ~~l~~~l~~~~~~v~l~~p~nptG~~~--~~~~l~~l~~~~~~~~~~li~De~~ 223 (404)
T 2o1b_A 172 SKVDSQIIDKTKLIYLTYPNNPTGSTA--TKEVFDEAIAKFKGTDTKIVHDFAY 223 (404)
T ss_dssp GGSCHHHHHHEEEEEECSSCTTTCCCC--CHHHHHHHHHHHTTSSCEEEEECTT
T ss_pred HHHHHhhccCceEEEEcCCCCCCCccC--CHHHHHHHHHHHHHcCCEEEEEccc
Confidence 4444433 345666663 23221 2355688889999999999999754
No 136
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=25.47 E-value=47 Score=27.31 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=29.0
Q ss_pred Cchhhhh-cccCcEEEe-c----CCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 22 EEIPDFT-PHVRALYVN-V----GTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 22 ~~~~~~~-~~~d~vvi~-~----G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++.+ .+..++++. + |..- ..+.+.++.+.++++++++|+|-.-
T Consensus 149 ~~l~~~l~~~~~~v~l~~p~nptG~~~--~~~~l~~l~~~~~~~~~~li~De~~ 200 (376)
T 2dou_A 149 KAVPEGVWREAKVLLLNYPNNPTGAVA--DWGYFEEALGLARKHGLWLIHDNPY 200 (376)
T ss_dssp GGSCHHHHHHEEEEEECSSCTTTCCCC--CHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHhhccCceEEEECCCCCCcCccC--CHHHHHHHHHHHHHcCCEEEEEccc
Confidence 3444433 245666663 2 3321 2355688889999999999999754
No 137
>1yzy_A Hypothetical protein HI1011; putative tRNA synthase, structural genomics, PSI, protein structure initiative; 2.10A {Haemophilus influenzae} SCOP: c.146.1.1
Probab=25.44 E-value=91 Score=26.81 Aligned_cols=99 Identities=19% Similarity=0.126 Sum_probs=54.7
Q ss_pred hhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHH---HHHHHHHHhcCCCEEE-------cccccCC
Q 026308 3 LVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSM---KAAAQLASQLGKPWVL-------DPVAAGA 72 (240)
Q Consensus 3 ~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~---~~~~~~~~~~~~~vvl-------Dp~~~~~ 72 (240)
.++..+.-.|-+....-.+... +....+|+++|.+.+.+-...+++ ..+.+.+++.+++.+. |....++
T Consensus 14 D~~~~l~~~G~~t~~~~~~~~~-~~~~~~d~vvi~t~SR~l~~~eA~~~~~~~~~~l~~~g~~~~~~k~csr~DSTlRGn 92 (413)
T 1yzy_A 14 DIASFLVENGLSTVQMNGVPTQ-SLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGN 92 (413)
T ss_dssp HHHHHHHTTTCCEEEEESCCSS-CCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCSEEEECCTTCCCCTTCT
T ss_pred HHHHHHHHCCCeEEEEeCCCCc-ccCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEecCccCCCCCC
Confidence 3455555566666433222221 122478999998887433333333 4455556667777665 8876544
Q ss_pred cccchHHHHHHhccCCeEEcCCHHHHHHHH
Q 026308 73 SGFRLNACLELVQLKPTVIRGNASEIIALS 102 (240)
Q Consensus 73 ~~~~~~~~~~~~~~~~~vitPN~~E~~~L~ 102 (240)
.+...+...+.+.....++.|=..|.-+.+
T Consensus 93 ig~e~dal~~~~g~~~~iv~PAfP~~GR~t 122 (413)
T 1yzy_A 93 IGPVTDALLDELNEDFTVITPALPVNGRTI 122 (413)
T ss_dssp HHHHHHHHHHHHTCCCEEECCCBGGGTEEE
T ss_pred hHHHHHHHHHHhCCCcEEEEccccCCCCEE
Confidence 333333333444334678888877766653
No 138
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=25.20 E-value=2.2e+02 Score=23.76 Aligned_cols=80 Identities=19% Similarity=0.193 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.....++.+++.|+.+.+|=.+.+.+++. .+....++.||-...=...+...+ ....+.+..-
T Consensus 276 ~~~~~~l~~l~~~G~~ialDDfG~g~ssl~-----~L~~l~~d~iKiD~~~v~~~~~~~-----------~~~~~v~~i~ 339 (400)
T 3sy8_A 276 ASSLENLVRLWIMGCGLAMDDFGAGYSSLD-----RLCEFPFSQIKLDRTFVQKMKTQP-----------RSCAVISSVV 339 (400)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECSCSGGGG-----SSSSCCCSEEEECTHHHHHHHHCT-----------THHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCchhhHH-----HHHhCCCCEEEECHHHHhhhhcCh-----------hHHHHHHHHH
Confidence 334566778899999999998886654432 122235799998876665554422 2345666677
Q ss_pred HHHHhcCCEEEEecCc
Q 026308 127 CLAEASGAIVAVSGAV 142 (240)
Q Consensus 127 ~l~~~~~~~VvitG~~ 142 (240)
.+++..+..||..|-.
T Consensus 340 ~~a~~l~~~vvaEGVE 355 (400)
T 3sy8_A 340 ALAQALGISLVVEGVE 355 (400)
T ss_dssp HHHHHHTCEEEECCCC
T ss_pred HHHHHcCCeEEEecCC
Confidence 7888888889988863
No 139
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=25.18 E-value=53 Score=29.39 Aligned_cols=45 Identities=11% Similarity=0.154 Sum_probs=32.2
Q ss_pred chhhhhcccCcEEEec---CC--CCCChHHHHHHHHHHHHhcCCCEEEcc
Q 026308 23 EIPDFTPHVRALYVNV---GT--LSANWLPSMKAAAQLASQLGKPWVLDP 67 (240)
Q Consensus 23 ~~~~~~~~~d~vvi~~---G~--~~~~~~~~~~~~~~~~~~~~~~vvlDp 67 (240)
.+.++++.+|.++++. |. +.+.....-+.++..|++.|+|+++=.
T Consensus 273 nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~AT 322 (520)
T 3khd_A 273 HFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITAT 322 (520)
T ss_dssp THHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECC
T ss_pred hHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEee
Confidence 3566777889999953 33 334444555789999999999999643
No 140
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=25.00 E-value=40 Score=28.52 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhcCCCEEEccccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
+.++++.+.++++++++|+|-+-.
T Consensus 221 ~~l~~l~~l~~~~~~lli~DEv~~ 244 (429)
T 4e77_A 221 EFLPGLRALCDEFGALLIIDEVMT 244 (429)
T ss_dssp THHHHHHHHHHHHTCEEEEEETTT
T ss_pred HHHHHHHHHHHHcCCEEEEecccc
Confidence 346788888999999999998764
No 141
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=24.96 E-value=59 Score=26.63 Aligned_cols=47 Identities=17% Similarity=0.316 Sum_probs=30.5
Q ss_pred CCCchhhhhc-ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP-HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.++ +..++++. +|... ..+.+.++.+.++++++++|+|-.
T Consensus 143 d~~~l~~~l~~~~~~v~~~~~~nptG~~~--~~~~l~~i~~la~~~~~~li~De~ 195 (375)
T 3op7_A 143 DLEKLRQLIRPTTKMICINNANNPTGAVM--DRTYLEELVEIASEVGAYILSDEV 195 (375)
T ss_dssp CHHHHHHHCCTTCCEEEEESSCTTTCCCC--CHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CHHHHHHhhccCCeEEEEcCCCCCCCCCC--CHHHHHHHHHHHHHcCCEEEEEcc
Confidence 4445555443 45566663 23221 235578889999999999999976
No 142
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=24.49 E-value=1.3e+02 Score=23.43 Aligned_cols=61 Identities=8% Similarity=-0.053 Sum_probs=32.4
Q ss_pred hhHHHHHcCCCccc--CCCCCchhhhhcccCcEEEecCC--CCC----ChHHHHHHHHHHHHhcCCCEE
Q 026308 4 VANTLLSAGASPAM--LHTIEEIPDFTPHVRALYVNVGT--LSA----NWLPSMKAAAQLASQLGKPWV 64 (240)
Q Consensus 4 ~a~~~~~~g~~~~~--~~~~~~~~~~~~~~d~vvi~~G~--~~~----~~~~~~~~~~~~~~~~~~~vv 64 (240)
+.+.+-..|..... .++.+.+.+.+..+|.+++..|- +.+ .+......+++.+.+.++|++
T Consensus 29 i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiL 97 (239)
T 1o1y_A 29 MEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFL 97 (239)
T ss_dssp HHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEE
Confidence 44455555544431 22233344556789999996543 211 122334556666666677775
No 143
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=24.39 E-value=29 Score=30.39 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=28.7
Q ss_pred CCCchhhhhc-ccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP-HVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.+. +..+|++..+. +... ..-++++.+.++++++++++|..
T Consensus 228 d~~~Le~~i~~~~~~v~~~~~~nptG~-~~~l~~i~~la~~~~i~livDea 277 (514)
T 3mad_A 228 DVAAMREAITPNTVVVAGSAPGYPHGV-VDPIPEIAALAAEHGIGCHVDAC 277 (514)
T ss_dssp CHHHHHHHCCTTEEEEEEETTCTTTCC-CCCHHHHHHHHHHHTCEEEEECT
T ss_pred CHHHHHHHhccCCEEEEEeCCCCCCcc-ccCHHHHHHHHHHhCCeEEEecc
Confidence 4455555554 33445553322 1221 12257788889999999999985
No 144
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=24.36 E-value=86 Score=26.48 Aligned_cols=61 Identities=15% Similarity=0.056 Sum_probs=36.1
Q ss_pred EEEecCC--CCCC---hHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCC
Q 026308 34 LYVNVGT--LSAN---WLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGN 94 (240)
Q Consensus 34 vvi~~G~--~~~~---~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN 94 (240)
..+++|+ .... .+..++++++.+++.+.+|++|..-.+-+..-....+.+++ ..+|.+|-|
T Consensus 120 ~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~g~~VflDlK~~DIgnTv~~ya~a~~~~lgaD~vTVh 186 (352)
T 2fds_A 120 LIYKMNFAFYIPYGSVGINALKNVFDYLNSMNIPTMLDMKINDIGNTVKNYRKFIFEYLKSDSCTIN 186 (352)
T ss_dssp SEEEEEGGGTGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred CEEEecHHHHHhCCHHHHHHHHHHHHHHHHCCCeEEEEeecCchHHHHHHHHHHHHhhcCCCEEEEe
Confidence 3456666 2222 24445677788888999999999765533222122233333 357777777
No 145
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=24.35 E-value=35 Score=28.46 Aligned_cols=47 Identities=11% Similarity=0.164 Sum_probs=29.0
Q ss_pred CCCchhhhhc--ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP--HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.+. +...+++..+. ++.. .-++++.+.++++++++|+|-.
T Consensus 152 d~~~l~~~i~~~~~~~v~~~~~~-~G~~-~~l~~i~~l~~~~~~~li~Dea 200 (417)
T 3n0l_A 152 DYEKVREIAKKEKPKLIVCGASA-YARV-IDFAKFREIADEIGAYLFADIA 200 (417)
T ss_dssp CHHHHHHHHHHHCCSEEEECCSS-CCSC-CCHHHHHHHHHHHTCEEEEECT
T ss_pred CHHHHHHHHHhcCCeEEEECCcc-cCcc-CCHHHHHHHHHHcCCEEEEECc
Confidence 3445555554 45667664322 1111 1157788889999999999975
No 146
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=24.32 E-value=67 Score=27.64 Aligned_cols=49 Identities=8% Similarity=0.102 Sum_probs=30.7
Q ss_pred CCCchhhhhc-ccCcEEEec--CCC--CCChHHHHHHHHHHHHh--cCCCEEEccc
Q 026308 20 TIEEIPDFTP-HVRALYVNV--GTL--SANWLPSMKAAAQLASQ--LGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~~--G~~--~~~~~~~~~~~~~~~~~--~~~~vvlDp~ 68 (240)
+++++++.++ +..+|++.. +.+ .....+-++++.+.+++ +++++++|-.
T Consensus 154 d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea 209 (431)
T 3ht4_A 154 DFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNC 209 (431)
T ss_dssp CHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred CHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 3444555443 445666653 111 12235667888999999 9999999964
No 147
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.32 E-value=97 Score=21.50 Aligned_cols=52 Identities=15% Similarity=0.251 Sum_probs=24.8
Q ss_pred HcCCCcc-cCCCCCchhhhhc--ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEE
Q 026308 10 SAGASPA-MLHTIEEIPDFTP--HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVL 65 (240)
Q Consensus 10 ~~g~~~~-~~~~~~~~~~~~~--~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvl 65 (240)
..|...+ .+.+.++..+.++ +.|.+++...+|.-.-.+. ++..++.++|+|+
T Consensus 30 ~~G~~v~~~a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el----~~~lr~~~ipvI~ 84 (123)
T 2lpm_A 30 ELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDGEPSYPV----ADILAERNVPFIF 84 (123)
T ss_dssp HHCCCCCBCSCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHH----HHHHHHTCCSSCC
T ss_pred HCCCEEEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHH----HHHHHcCCCCEEE
Confidence 3444433 3444444444433 4677777666653333332 2334455666554
No 148
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=24.20 E-value=45 Score=28.84 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCCc
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGAS 73 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~~ 73 (240)
..+.++++++.|+++|+.||+|-+.-+.+
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 46788999999999999999999875443
No 149
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=24.14 E-value=53 Score=27.12 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+.+.++.+.++++++.+|+|-.-
T Consensus 180 ~~l~~l~~~~~~~~~~li~De~~ 202 (389)
T 1gd9_A 180 KDLEEIADFVVEHDLIVISDEVY 202 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHcCCEEEEehhh
Confidence 45788889999999999999654
No 150
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.98 E-value=1.1e+02 Score=24.60 Aligned_cols=16 Identities=6% Similarity=-0.045 Sum_probs=7.5
Q ss_pred HHHHHHHHhcCCCEEE
Q 026308 50 KAAAQLASQLGKPWVL 65 (240)
Q Consensus 50 ~~~~~~~~~~~~~vvl 65 (240)
..+++.++++++++|+
T Consensus 115 ~~~~~~~a~~~~~vv~ 130 (271)
T 2yci_X 115 DIFFPMAKKYEAAIIG 130 (271)
T ss_dssp HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 3344444445555544
No 151
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.97 E-value=2e+02 Score=22.95 Aligned_cols=82 Identities=11% Similarity=0.129 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcC------C---HHHHHHHHcCCCCCCcCCCCCC
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRG------N---ASEIIALSRASVGPTKGVDSSH 116 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitP------N---~~E~~~L~g~~~~~~~~~~~~~ 116 (240)
.+.+..+.+.+++.|+|++-||--.. ..+.+.++ +++++- | ..|+.. +|.++....|.. .
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~----~~~~l~~~----vd~~kIga~~~~n~~ll~~~a~-~~kPV~lk~G~~--~ 141 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTR----HVELVAKY----SDILQIGARNSQNFELLKEVGK-VENPVLLKRGMG--N 141 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGG----GHHHHHHH----CSEEEECGGGTTCHHHHHHHTT-SSSCEEEECCTT--C
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHH----hHHHHHhh----CCEEEECcccccCHHHHHHHHh-cCCcEEEecCCC--C
Confidence 46677777888889999987774311 11222222 223222 2 223333 344321112221 2
Q ss_pred ChHHHHHHHHHHHHhcCCEEEE
Q 026308 117 ESMDAMEAARCLAEASGAIVAV 138 (240)
Q Consensus 117 ~~~~~~~~a~~l~~~~~~~Vvi 138 (240)
+.+++..++..+...++..+++
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L 163 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVIL 163 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEE
T ss_pred CHHHHHHHHHHHHHCCCCeEEE
Confidence 5788888888887777654443
No 152
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=23.97 E-value=79 Score=25.84 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=37.7
Q ss_pred cEEEecCC--C-CC--ChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc----cCCeEEcCC
Q 026308 33 ALYVNVGT--L-SA--NWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ----LKPTVIRGN 94 (240)
Q Consensus 33 ~vvi~~G~--~-~~--~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~----~~~~vitPN 94 (240)
+..+++|+ . .. .-++.++++++.+++.+.+|++|..-.+-+..-....+.++. ..+|.+|-|
T Consensus 63 v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~g~~VflDlK~~DIpnTv~~ya~~~~~~~~~lg~D~vTvh 133 (284)
T 3l52_A 63 VAVFKPQSAFFERFGSRGVAVLEKTVAEARAAGALVVMDAKRGDIGSTMAAYAEAFLRKDSPLFSDALTVS 133 (284)
T ss_dssp CSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHHHHHSSTTSTTCCSEEEEC
T ss_pred ceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHCCCcEEEEecccCcHHHHHHHHHHHhccccccCCcEEEEe
Confidence 45667776 1 21 124567778888999999999999765432211112333432 247888877
No 153
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=23.92 E-value=1.2e+02 Score=22.04 Aligned_cols=12 Identities=17% Similarity=-0.044 Sum_probs=5.5
Q ss_pred HHHHHHHHhcCC
Q 026308 123 EAARCLAEASGA 134 (240)
Q Consensus 123 ~~a~~l~~~~~~ 134 (240)
+..++++++.+.
T Consensus 123 ~~~~~~a~~~~v 134 (190)
T 1ivn_A 123 AIYPKLAKEFDV 134 (190)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 334445554443
No 154
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=23.58 E-value=48 Score=28.89 Aligned_cols=28 Identities=11% Similarity=-0.171 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
..+.++++++.|+++|+.||+|-+.-+.
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 4678899999999999999999988654
No 155
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=23.57 E-value=90 Score=27.31 Aligned_cols=26 Identities=19% Similarity=0.236 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
+.++.+.+.|+++|+.+|+|=+..+.
T Consensus 257 ~fl~~lr~lc~~~gilLI~DEV~tGf 282 (473)
T 4e3q_A 257 GYFQAILPILRKYDIPVISDEVICGF 282 (473)
T ss_dssp THHHHHHHHHHHTTCCEEEECTTTSS
T ss_pred HHHHHHHHHhcccceEEeccCccccC
Confidence 45678888899999999999987654
No 156
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=23.53 E-value=48 Score=28.91 Aligned_cols=28 Identities=11% Similarity=-0.146 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
..+.++++++.|+++|+.||+|-+.-+.
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 4678899999999999999999987654
No 157
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=23.49 E-value=53 Score=27.06 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=28.8
Q ss_pred CCchhhhhc-ccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTP-HVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~-~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.+. +..++++.... +...... ++++.+.++++++++|+|-.-
T Consensus 154 ~~~l~~~l~~~~~~v~~~~~~nptG~~~~-l~~i~~l~~~~~~~li~D~~~ 203 (406)
T 1kmj_A 154 LETLPTLFDEKTRLLAITHVSNVLGTENP-LAEMITLAHQHGAKVLVDGAQ 203 (406)
T ss_dssp GGGHHHHCCTTEEEEEEESBCTTTCCBCC-HHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHhccCCeEEEEeCCCccccCcCC-HHHHHHHHHHcCCEEEEEchh
Confidence 455555553 34556653211 2222111 577888899999999999864
No 158
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.41 E-value=84 Score=25.78 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=23.6
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
..+|.||+.+|++.+.. .++.+++.|+|++=++.
T Consensus 65 ~~~d~vV~Spgi~~~~p------~~~~a~~~gi~v~~~~e 98 (326)
T 3eag_A 65 FKADVYVIGNVAKRGMD------VVEAILNLGLPYISGPQ 98 (326)
T ss_dssp CCCSEEEECTTCCTTCH------HHHHHHHTTCCEEEHHH
T ss_pred CCCCEEEECCCcCCCCH------HHHHHHHcCCcEEeHHH
Confidence 36899999999865542 23446788888875543
No 159
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=23.40 E-value=44 Score=27.60 Aligned_cols=62 Identities=8% Similarity=0.044 Sum_probs=35.1
Q ss_pred HHHHcCCCcccC--CCCCchhhhhcc-------cCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 7 TLLSAGASPAML--HTIEEIPDFTPH-------VRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 7 ~~~~~g~~~~~~--~~~~~~~~~~~~-------~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++...|..+... .+++.+++.++. ..++++.+.. +...... ++++.+.++++++++|+|-.-
T Consensus 143 ~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~-l~~i~~l~~~~~~~li~De~~ 214 (399)
T 3tqx_A 143 GIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD-LKSICDLADKYNALVMVDDSH 214 (399)
T ss_dssp HHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC-HHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC-HHHHHHHHHHcCCEEEEECCc
Confidence 344455544222 456666666653 4455554211 2111111 578888899999999999864
No 160
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=23.25 E-value=1.4e+02 Score=23.90 Aligned_cols=63 Identities=11% Similarity=0.007 Sum_probs=36.2
Q ss_pred hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCC
Q 026308 24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGN 94 (240)
Q Consensus 24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN 94 (240)
+.+.+..+|+|+--+ + .+.....++.+.+.|+++|+=..+.. ......+.++.+..+.++.||
T Consensus 66 l~~~l~~~DvVIDft---~---p~~~~~~~~~a~~~G~~vVigTtG~~--~e~~~~L~~~a~~~~vv~a~N 128 (273)
T 1dih_A 66 LDAVKDDFDVFIDFT---R---PEGTLNHLAFCRQHGKGMVIGTTGFD--EAGKQAIRDAAADIAIVFAAN 128 (273)
T ss_dssp STTTTTSCSEEEECS---C---HHHHHHHHHHHHHTTCEEEECCCCCC--HHHHHHHHHHTTTSCEEECSC
T ss_pred HHHHhcCCCEEEEcC---C---hHHHHHHHHHHHhCCCCEEEECCCCC--HHHHHHHHHhcCCCCEEEEec
Confidence 344556789887322 1 14456777888899999998444411 111112223323457899999
No 161
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=23.01 E-value=74 Score=27.19 Aligned_cols=50 Identities=8% Similarity=0.036 Sum_probs=30.6
Q ss_pred CCCchhhhhc-ccCcEEEec--CCC--CCChHHHHHHHHHHHHh--cCCCEEEcccc
Q 026308 20 TIEEIPDFTP-HVRALYVNV--GTL--SANWLPSMKAAAQLASQ--LGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~~--G~~--~~~~~~~~~~~~~~~~~--~~~~vvlDp~~ 69 (240)
+++++++.++ +...|++.. |++ ......-++++.+.+++ +++++++|-.-
T Consensus 148 d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~ 204 (409)
T 3jzl_A 148 DFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCY 204 (409)
T ss_dssp CHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTT
T ss_pred CHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCc
Confidence 3344544443 345666653 222 12234557888899999 89999999763
No 162
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=22.96 E-value=50 Score=28.81 Aligned_cols=28 Identities=18% Similarity=-0.018 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
..+.++++++.|+++|+.||+|-+.-+.
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 4678899999999999999999987654
No 163
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=22.92 E-value=56 Score=26.53 Aligned_cols=38 Identities=16% Similarity=0.275 Sum_probs=26.0
Q ss_pred cccCcEEEe-c-----CCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 29 PHVRALYVN-V-----GTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 29 ~~~d~vvi~-~-----G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
.+...+++. + |... ..+.++++.+.++++++++|+|..
T Consensus 136 ~~~~~v~~~~p~n~~~G~~~--~~~~l~~l~~~~~~~~~~li~D~a 179 (359)
T 3pj0_A 136 EPVSSVLIELPQREIGGQLP--AFEELEKISEYCHEQGISLHLDGA 179 (359)
T ss_dssp SCCSEEEEESSBGGGTSBCC--CHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCceEEEEEecccCCCcccC--CHHHHHHHHHHHHHcCCEEEEECc
Confidence 345677763 1 3322 245678888999999999999954
No 164
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=22.73 E-value=99 Score=22.11 Aligned_cols=47 Identities=9% Similarity=-0.041 Sum_probs=27.0
Q ss_pred CCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 19 HTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 19 ~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
++.+.+...-.+.|++++|+|....... .++.+.+++.|+.+-+-+.
T Consensus 56 e~l~~l~~~~p~pevliiGTG~~~~~l~---p~l~~~l~~~GI~vE~M~T 102 (135)
T 2fvt_A 56 YSLQRVFDNANAIDTLIVGTGADVWIAP---RQLREALRGVNVVLDTMQT 102 (135)
T ss_dssp TTTHHHHHTTTSCSEEEEECTTSCCCCC---HHHHHHHHTTTCEEEEECH
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCCCcCC---HHHHHHHHHcCCEEEEeCH
Confidence 3444444444568999999997311111 3445567788877655443
No 165
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=22.71 E-value=1.9e+02 Score=19.77 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=32.0
Q ss_pred cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCC-EEEcccccCCcccchHHHHHHhc
Q 026308 29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKP-WVLDPVAAGASGFRLNACLELVQ 85 (240)
Q Consensus 29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~-vvlDp~~~~~~~~~~~~~~~~~~ 85 (240)
+.+|.+++..|.. .....++++.+++.|+. -++|+..+. ++..+.+.++++
T Consensus 12 ~g~dv~iv~~Gs~----~~~a~eA~~~L~~~Gi~v~vi~~r~~~--P~d~~~l~~~~~ 63 (118)
T 3ju3_A 12 KEADITFVTWGSQ----KGPILDVIEDLKEEGISANLLYLKMFS--PFPTEFVKNVLS 63 (118)
T ss_dssp SSCSEEEEEEGGG----HHHHHHHHHHHHHTTCCEEEEEECSSC--SCCHHHHHHHHT
T ss_pred CCCCEEEEEECcc----HHHHHHHHHHHHHCCCceEEEEECeEe--cCCHHHHHHHHc
Confidence 3578889888864 24445666777777754 578887532 344444455554
No 166
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=22.71 E-value=1e+02 Score=25.36 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=24.4
Q ss_pred hHHHHHcCCCcccCCC---CCchhhhhcccCcEEEecC
Q 026308 5 ANTLLSAGASPAMLHT---IEEIPDFTPHVRALYVNVG 39 (240)
Q Consensus 5 a~~~~~~g~~~~~~~~---~~~~~~~~~~~d~vvi~~G 39 (240)
.+.+...|+.+.+... .+++.+.+..+|.+++..|
T Consensus 58 ~~~l~~~G~~~~vv~~~~~~~~i~~~l~~~dglil~GG 95 (315)
T 1l9x_A 58 VKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGG 95 (315)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCC
T ss_pred HHHHHHCCCEEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 5778888999955533 3345555678999999544
No 167
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=22.48 E-value=50 Score=27.43 Aligned_cols=48 Identities=19% Similarity=0.274 Sum_probs=31.0
Q ss_pred CCCchhhhhc-ccCcEEEec-----CC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTP-HVRALYVNV-----GT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~-~~d~vvi~~-----G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+. +..++++.+ |. .- ..+.++++.+.++++++++|+|-.-
T Consensus 172 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~--~~~~l~~l~~l~~~~~~~li~De~~ 226 (397)
T 2ord_A 172 NVEDLRRKMSEDVCAVFLEPIQGESGIVPA--TKEFLEEARKLCDEYDALLVFDEVQ 226 (397)
T ss_dssp CHHHHHHHCCTTEEEEEECSEECTTTCEEC--CHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHhhcCeEEEEEecccCCCCcccC--CHHHHHHHHHHHHHcCCEEEEEecc
Confidence 4555555553 345666642 32 11 1356788888999999999999875
No 168
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=22.37 E-value=58 Score=28.09 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccC
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAG 71 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~ 71 (240)
+.++.+.+.++++++.+|+|-+..+
T Consensus 255 ~~l~~l~~l~~~~gillI~DEv~~g 279 (457)
T 3tfu_A 255 RYLHDLRDICRRYEVLLIFDEIATG 279 (457)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccC
Confidence 5568888889999999999987543
No 169
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=22.30 E-value=1.1e+02 Score=25.23 Aligned_cols=63 Identities=11% Similarity=-0.006 Sum_probs=35.3
Q ss_pred hhHHHHHcCCC--cc-cC---CCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCC---CEEEcccc
Q 026308 4 VANTLLSAGAS--PA-ML---HTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK---PWVLDPVA 69 (240)
Q Consensus 4 ~a~~~~~~g~~--~~-~~---~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~---~vvlDp~~ 69 (240)
++...+-.|+. |+ .+ .+.+++.+...++++-++-.-+. ..+.+.+.++.+.+.|+ .+|+||-.
T Consensus 139 V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~---dv~~l~~~~~~a~~~Gi~~e~IilDPg~ 210 (310)
T 2h9a_B 139 IFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPL---DINLSKQLNIMIMEMNLAPNRIIMDPLI 210 (310)
T ss_dssp HHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSS---CHHHHHHHHHHHHTTTCCGGGEEEECCC
T ss_pred HHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChh---HHHHHHHHHHHHHHCCCChhhEEEeCCC
Confidence 34555666664 32 22 22233444445556555432221 24667788888888887 48899875
No 170
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=22.19 E-value=1.1e+02 Score=22.53 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=12.9
Q ss_pred HHHHHhcCCCEEEcccccCCcc
Q 026308 53 AQLASQLGKPWVLDPVAAGASG 74 (240)
Q Consensus 53 ~~~~~~~~~~vvlDp~~~~~~~ 74 (240)
+..+...--.+|+||.+....+
T Consensus 64 Ih~a~~~~dgiiINpgA~THtS 85 (151)
T 3u80_A 64 MHQAADEKTPVVMNPAAFTHYS 85 (151)
T ss_dssp HHHHHHHTCCEEEECTTCCSCC
T ss_pred HHHhhhcCcEEEECcchhhhhh
Confidence 3444444456888998754333
No 171
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=22.18 E-value=53 Score=29.02 Aligned_cols=28 Identities=21% Similarity=-0.018 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCC
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGA 72 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~ 72 (240)
..+.++++++.|+++|+.||+|-+.-+.
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 4678899999999999999999987655
No 172
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=22.13 E-value=67 Score=25.89 Aligned_cols=23 Identities=13% Similarity=0.140 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+.++++.+.++++++.+|+|-.-
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~ 186 (359)
T 1svv_A 164 QELEDISASCKEHGLYLFLDGAR 186 (359)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCEEEEEccc
Confidence 55788888899999999999863
No 173
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=21.98 E-value=55 Score=22.16 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
..-.++++.++++|+|++=||..
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHH
Confidence 34578889999999999999975
No 174
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=21.94 E-value=56 Score=22.10 Aligned_cols=23 Identities=17% Similarity=0.095 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhcCCCEEEcccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
..-.++++.++++|+|++=||..
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHH
Confidence 44578888999999999999974
No 175
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=21.81 E-value=40 Score=29.35 Aligned_cols=50 Identities=14% Similarity=0.120 Sum_probs=30.6
Q ss_pred CCCchhhhhccc-----C--cEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPHV-----R--ALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~~-----d--~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++++++.+.+. . .|++..|..+....+-+.++.+.++++++.+++|..-
T Consensus 241 d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~ 297 (497)
T 2qma_A 241 DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAY 297 (497)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhh
Confidence 456666666432 1 3444334321122344578888899999999999974
No 176
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=21.79 E-value=1.5e+02 Score=24.30 Aligned_cols=23 Identities=35% Similarity=0.307 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHhcCC-CEEEccc
Q 026308 46 LPSMKAAAQLASQLGK-PWVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~-~vvlDp~ 68 (240)
.+.+.+.++.+.+.|+ .+|+||-
T Consensus 176 ~~~l~~~i~~a~~~Gi~~IilDPG 199 (294)
T 2dqw_A 176 KAFLEAQARRALSAGVPQVVLDPG 199 (294)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCcEEEcCC
Confidence 3445556666666765 4777773
No 177
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=21.75 E-value=94 Score=25.90 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCchhhhhc-ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTP-HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~-~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.+. +..++++. +|..- ..+.++++.+.++++++++|+|-.-
T Consensus 164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~Dea~ 216 (409)
T 2gb3_A 164 PQNLESFINERTKGIVLSNPCNPTGVVY--GKDEMRYLVEIAERHGLFLIVDEVY 216 (409)
T ss_dssp CTTGGGGCCTTEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHhhCcCCeEEEECCCCCCCCCCc--CHHHHHHHHHHHHHcCCEEEEECcc
Confidence 455555543 34555553 24321 1355788889999999999999864
No 178
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=21.67 E-value=36 Score=29.64 Aligned_cols=50 Identities=10% Similarity=0.052 Sum_probs=30.1
Q ss_pred CCCchhhhhccc-------CcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPHV-------RALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~~-------d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++.+++.++.. -.|++..|......++-+.++.+.++++++++++|..-
T Consensus 224 d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~ 280 (481)
T 4e1o_A 224 RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAY 280 (481)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhh
Confidence 445566555432 22444444422222344678888899999999999853
No 179
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=21.54 E-value=62 Score=26.62 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=30.0
Q ss_pred CCchhhhhc-ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccccc
Q 026308 21 IEEIPDFTP-HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 21 ~~~~~~~~~-~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
++++++.+. +..++++. +|..- ..+.+.++.+.++++++.+|+|-.-.
T Consensus 142 ~~~l~~~l~~~~~~v~~~~~~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~ 195 (381)
T 1v2d_A 142 LSALEKALTPRTRALLLNTPMNPTGLVF--GERELEAIARLARAHDLFLISDEVYD 195 (381)
T ss_dssp HHHHHTTCCTTEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHhcCcCCEEEEECCCCCCCCCcc--CHHHHHHHHHHHHHcCCEEEEEcCcc
Confidence 344444443 34566653 23321 13557888899999999999998653
No 180
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=21.49 E-value=68 Score=27.10 Aligned_cols=50 Identities=18% Similarity=0.315 Sum_probs=32.0
Q ss_pred CCCchhhhhc----ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccccc
Q 026308 20 TIEEIPDFTP----HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 20 ~~~~~~~~~~----~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
+++++++.++ +..++++. .|...+ ..+.++.+.+.++++++.+|+|-+-.
T Consensus 189 d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~-~~~~l~~l~~l~~~~g~~lI~DEv~~ 247 (434)
T 2epj_A 189 DVEALERVFAEYGDRIAGVIVEPVIANAGVIPP-RREFLAALQRLSRESGALLILDEVVT 247 (434)
T ss_dssp CHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCC-CHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCC-CHHHHHHHHHHHHHcCCEEEEEcchh
Confidence 4556666654 33355553 243211 24567888899999999999998764
No 181
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=21.48 E-value=79 Score=23.25 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=29.7
Q ss_pred CCCCchhhhhcccC--cEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 19 HTIEEIPDFTPHVR--ALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 19 ~~~~~~~~~~~~~d--~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
..++++.++++++. ++++|.|.... +..+.+.+.+.+.++||+--+.+
T Consensus 22 ~~v~~aa~~L~~AkrPvil~G~g~~~~---~a~~~l~~lae~~~iPV~~t~~g 71 (170)
T 3cf4_G 22 VSPEMAAKIISKAKRPLLMVGTLALDP---ELLDRVVKISKAANIPIAATGSS 71 (170)
T ss_dssp CCHHHHHHHHHHCSSEEEEECSTTCCH---HHHHHHHHHHHHHTCCEEECTTT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCccch---hHHHHHHHHHHHhCCCEEECccc
Confidence 34556666776654 55556565432 34456667777889998765544
No 182
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=21.47 E-value=65 Score=27.65 Aligned_cols=29 Identities=17% Similarity=-0.012 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccccCCcc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAAGASG 74 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~~~~~ 74 (240)
.+.++++++.|+++|+.||+|-+.-+.+.
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 97 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGF 97 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccC
Confidence 57789999999999999999999866554
No 183
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=21.36 E-value=69 Score=27.03 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhcCCCEEEccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
.+.+.++++.++++++++|+|-+
T Consensus 225 ~~~l~~i~~~a~~~~~~li~De~ 247 (444)
T 3if2_A 225 DEEMAHLAEIAKRYDIPLIIDNA 247 (444)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEECC
Confidence 35578888999999999999975
No 184
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=21.28 E-value=57 Score=28.36 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccccCCc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAAGAS 73 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~~~~ 73 (240)
.+.++++++.++++|+.||+|-+.-+.+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 5778999999999999999999886554
No 185
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=21.25 E-value=52 Score=30.04 Aligned_cols=46 Identities=20% Similarity=0.183 Sum_probs=33.8
Q ss_pred hhhhhcccCcEEEecC-----CCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 24 IPDFTPHVRALYVNVG-----TLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 24 ~~~~~~~~d~vvi~~G-----~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+.++++.+|.++++.| ++.+......+.+++.|++.++|+++-.-+
T Consensus 250 ldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQM 300 (606)
T 3t05_A 250 IEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQM 300 (606)
T ss_dssp HHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSS
T ss_pred HHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHH
Confidence 5667778999999543 344445556688999999999999984443
No 186
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=21.23 E-value=93 Score=27.31 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=23.7
Q ss_pred hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+..+|.||+++|++.+.. .+..+++.++|++=++.
T Consensus 79 ~~~~d~vV~Spgi~~~~p------~~~~a~~~gi~v~~~~e 113 (494)
T 4hv4_A 79 VLDASVVVVSTAISADNP------EIVAAREARIPVIRRAE 113 (494)
T ss_dssp GTTCSEEEECTTSCTTCH------HHHHHHHTTCCEEEHHH
T ss_pred cCCCCEEEECCCCCCCCH------HHHHHHHCCCCEEcHHH
Confidence 456899999999965442 13345777888775543
No 187
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=20.96 E-value=70 Score=26.44 Aligned_cols=47 Identities=15% Similarity=0.211 Sum_probs=29.3
Q ss_pred CCchhhhhc-ccCcEEEe-c----CCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTP-HVRALYVN-V----GTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~-~~d~vvi~-~----G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++.+++.+. +...+++. + |... ..+.+.++++.++++++.+|+|-.-
T Consensus 169 ~~~l~~~l~~~~~~v~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~Dea~ 221 (407)
T 3nra_A 169 LTGLEEAFKAGARVFLFSNPNNPAGVVY--SAEEIGQIAALAARYGATVIADQLY 221 (407)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTTTCCCC--CHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHhhCCcEEEEcCCCCCCCccc--CHHHHHHHHHHHHHcCCEEEEEccc
Confidence 444555443 34555542 2 3321 2355788889999999999999754
No 188
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=20.88 E-value=72 Score=26.48 Aligned_cols=46 Identities=9% Similarity=0.125 Sum_probs=29.7
Q ss_pred CCCchhhhhc--ccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP--HVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.+. +..++++..+. +.... ++++.+.++++++++|+|-.
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~~~~~---l~~l~~l~~~~~~~li~De~ 205 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYSGVVD---WAKMREIADSIGAYLFVDMA 205 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCCSCCC---HHHHHHHHHHTTCEEEEECT
T ss_pred CHHHHHHHHHhcCCeEEEEecCccCCccC---HHHHHHHHHHcCCEEEEECC
Confidence 4455555554 35677773322 22222 57788889999999999986
No 189
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=20.83 E-value=24 Score=29.53 Aligned_cols=57 Identities=19% Similarity=0.225 Sum_probs=34.4
Q ss_pred HHHHcCCCcccC--C-----CCCchhhhhc--ccCcEEEe-----cCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 7 TLLSAGASPAML--H-----TIEEIPDFTP--HVRALYVN-----VGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 7 ~~~~~g~~~~~~--~-----~~~~~~~~~~--~~d~vvi~-----~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
.+...|..+... + +++++++.+. +...+++. +|...+ ++++.+.++++++++|+|..
T Consensus 104 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~-----l~~i~~l~~~~~~~li~D~a 174 (416)
T 3isl_A 104 IAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP-----LKAIGEACRTEDALFIVDAV 174 (416)
T ss_dssp HHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC-----CHHHHHHHHHTTCEEEEECT
T ss_pred HHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC-----HHHHHHHHHHcCCEEEEECC
Confidence 444556655322 1 4455665554 45666663 233222 46778889999999999975
No 190
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=20.82 E-value=72 Score=26.37 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCCchhhhhc--ccCcEEE-ecCCCCCChHHHHHHHHHHHHhcCCCEEEccc
Q 026308 20 TIEEIPDFTP--HVRALYV-NVGTLSANWLPSMKAAAQLASQLGKPWVLDPV 68 (240)
Q Consensus 20 ~~~~~~~~~~--~~d~vvi-~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~ 68 (240)
+++++++.+. +..++++ .+..+... -++++.+.++++++++|+|-.
T Consensus 151 d~~~l~~~l~~~~~~~v~~~~p~~~~~~---~l~~i~~l~~~~~~~li~Dea 199 (407)
T 2dkj_A 151 DLEEVRRLALEHRPKVIVAGASAYPRFW---DFKAFREIADEVGAYLVVDMA 199 (407)
T ss_dssp CHHHHHHHHHHHCCSEEEECCSSCCSCC---CHHHHHHHHHHHTCEEEEECT
T ss_pred CHHHHHHHHhhcCCeEEEEeccccCCCC---CHHHHHHHHHHcCCEEEEEcc
Confidence 3445555554 4667777 23222111 247788889999999999987
No 191
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=20.81 E-value=1.2e+02 Score=23.02 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=31.9
Q ss_pred hhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecC---CCCCChHHHHHHHHHHHHhcCCCEE
Q 026308 3 LVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVG---TLSANWLPSMKAAAQLASQLGKPWV 64 (240)
Q Consensus 3 ~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G---~~~~~~~~~~~~~~~~~~~~~~~vv 64 (240)
..++.+...|+.+.+...-+... .+..+|.+++..| .+.+. .....+.+.+.+.++|++
T Consensus 28 ~~~~~l~~~G~~~~vv~~~~~~~-~l~~~DglIl~GG~p~~~~~~--~~~~~l~~~~~~~~~PiL 89 (212)
T 2a9v_A 28 REWRVLRELGVDTKIVPNDIDSS-ELDGLDGLVLSGGAPNIDEEL--DKLGSVGKYIDDHNYPIL 89 (212)
T ss_dssp HHHHHHHHTTCBCCEEETTSCGG-GGTTCSEEEEEEECSCGGGTG--GGHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH-HHhCCCEEEECCCCCCCCccc--ccchhHHHHHHhCCCCEE
Confidence 45677888898885543212222 3345899999655 22221 011233344556677764
No 192
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=20.77 E-value=97 Score=26.63 Aligned_cols=81 Identities=12% Similarity=0.148 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHH
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAA 125 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a 125 (240)
.+.+...++.+++.|+.+.+|=.+.+.+++. .+....+++||-...-...+.. ......+.+..
T Consensus 156 ~~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~-----~L~~l~~d~iKID~s~v~~~~~-----------~~~~~~il~~i 219 (431)
T 2bas_A 156 IEQLYHMLAYYRTYGIKIAVDNIGKESSNLD-----RIALLSPDLLKIDLQALKVSQP-----------SPSYEHVLYSI 219 (431)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEETTTBCCHH-----HHHHHCCSEEEEECTTTC---------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCcHHHH-----HHHhCCCCEEEECHHHHhhhhc-----------CHhHHHHHHHH
Confidence 4566788888999999999998875544432 1222357777754322111110 01123455666
Q ss_pred HHHHHhcCCEEEEecCc
Q 026308 126 RCLAEASGAIVAVSGAV 142 (240)
Q Consensus 126 ~~l~~~~~~~VvitG~~ 142 (240)
..+++..+..||..|-.
T Consensus 220 i~la~~lg~~vvAEGVE 236 (431)
T 2bas_A 220 SLLARKIGAALLYEDIE 236 (431)
T ss_dssp HHHHHHHTCEEEEECCC
T ss_pred HHHHHHcCCEEEEEeCC
Confidence 67778888899999963
No 193
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=20.67 E-value=31 Score=30.43 Aligned_cols=50 Identities=8% Similarity=-0.022 Sum_probs=30.9
Q ss_pred CCCchhhhhcc-------cCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 20 TIEEIPDFTPH-------VRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 20 ~~~~~~~~~~~-------~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
+++.+++.+.+ ...|++..|......++-+.++.+.|+++++.+++|..-
T Consensus 231 d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~ 287 (511)
T 3vp6_A 231 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW 287 (511)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccc
Confidence 44556665543 234555444422222344678888899999999999853
No 194
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=20.45 E-value=25 Score=29.17 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=28.1
Q ss_pred CCchhhhhc---ccCcEEEec-----CCCCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTP---HVRALYVNV-----GTLSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~---~~d~vvi~~-----G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.++ +..++++.. |...+ ++++.+.++++++++|+|..-
T Consensus 122 ~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~-----l~~i~~l~~~~~~~li~D~a~ 173 (392)
T 2z9v_A 122 PQAVADMLKAHPEITVVSVCHHDTPSGTINP-----IDAIGALVSAHGAYLIVDAVS 173 (392)
T ss_dssp HHHHHHHHHHCTTCCEEEEESEEGGGTEECC-----HHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHhcCCCCcEEEEeccCCCCceecc-----HHHHHHHHHHcCCeEEEEccc
Confidence 445555552 455666532 43221 467788899999999999864
No 195
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.42 E-value=1.5e+02 Score=23.59 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=0.0
Q ss_pred hhHHHHHc--CCCcccCCCCC-----chhhhhcccCcEEEecCCCCCCh-------HHHHHHHHHHHHhcCCC---EEEc
Q 026308 4 VANTLLSA--GASPAMLHTIE-----EIPDFTPHVRALYVNVGTLSANW-------LPSMKAAAQLASQLGKP---WVLD 66 (240)
Q Consensus 4 ~a~~~~~~--g~~~~~~~~~~-----~~~~~~~~~d~vvi~~G~~~~~~-------~~~~~~~~~~~~~~~~~---vvlD 66 (240)
++...+.. |+.-+.+-.-. ++.+.+.+.++-++-.-+..... .+.+.+.++.+.+.|++ +++|
T Consensus 81 v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilD 160 (262)
T 1f6y_A 81 AIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYID 160 (262)
T ss_dssp HHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEe
Q ss_pred c
Q 026308 67 P 67 (240)
Q Consensus 67 p 67 (240)
|
T Consensus 161 P 161 (262)
T 1f6y_A 161 P 161 (262)
T ss_dssp C
T ss_pred C
No 196
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=20.41 E-value=71 Score=27.46 Aligned_cols=29 Identities=17% Similarity=0.045 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHhcCCCEEEcccccCCc
Q 026308 45 WLPSMKAAAQLASQLGKPWVLDPVAAGAS 73 (240)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~vvlDp~~~~~~ 73 (240)
..+.++++++.++++|+.||+|-+.-+.+
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 46788999999999999999999886554
No 197
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=20.35 E-value=79 Score=26.62 Aligned_cols=24 Identities=17% Similarity=-0.020 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
.+.+.++++.++++++.+|+|-.-
T Consensus 210 ~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 210 SERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEECCc
Confidence 455678889999999999998754
No 198
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=20.29 E-value=27 Score=28.21 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=27.7
Q ss_pred CCchhhhhc--ccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccc
Q 026308 21 IEEIPDFTP--HVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVA 69 (240)
Q Consensus 21 ~~~~~~~~~--~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~ 69 (240)
++++++.++ +..++++.... +..... -++++.+.++++++++|+|-.-
T Consensus 113 ~~~l~~~l~~~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~li~D~a~ 163 (353)
T 2yrr_A 113 PEAVARALKRRRYRMVALVHGETSTGVLN-PAEAIGALAKEAGALFFLDAVT 163 (353)
T ss_dssp HHHHHHHHHHSCCSEEEEESEETTTTEEC-CHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHhCCCCEEEEEccCCCcceec-CHHHHHHHHHHcCCeEEEEcCc
Confidence 344555443 35566653211 211111 1467778889999999999864
No 199
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=20.29 E-value=74 Score=26.76 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhcCCCEEEccccc
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAA 70 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~ 70 (240)
+.++++.+.++++++.+|+|-+-.
T Consensus 220 ~~l~~l~~l~~~~~~~li~DEv~~ 243 (427)
T 3fq8_A 220 GFLEGLREITLEHDALLVFDEVIT 243 (427)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHHHHHcCCEEEEecccc
Confidence 346788888999999999998754
No 200
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=20.06 E-value=74 Score=27.00 Aligned_cols=28 Identities=14% Similarity=0.041 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEcccccCCc
Q 026308 46 LPSMKAAAQLASQLGKPWVLDPVAAGAS 73 (240)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vvlDp~~~~~~ 73 (240)
.+.++++++.++++|+.||+|-+.-+.+
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 5778999999999999999999886554
No 201
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=20.03 E-value=1.3e+02 Score=23.63 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308 47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR 126 (240)
Q Consensus 47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~ 126 (240)
+.+...++.+++.|+.+.+|=.+.+.+++.. +....++.||-...=.. +... ..........-
T Consensus 153 ~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~-----L~~l~~d~iKiD~~~v~---~~~~---------~~~~~~l~~ii 215 (268)
T 3hv8_A 153 KQAKQLTQGLATLHCQAAISQFGCSLNPFNA-----LKHLTVQFIKIDGSFVQ---DLNQ---------VENQEILKGLI 215 (268)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETCSSSTTGG-----GGTCCCSEEEECGGGGS---STTS---------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCChHHHHH-----HHhCCCCEEEECHHHHH---hhhc---------ChhHHHHHHHH
Confidence 4456777888999999999987765544321 22235788886542111 1100 11123344445
Q ss_pred HHHHhcCCEEEEecC
Q 026308 127 CLAEASGAIVAVSGA 141 (240)
Q Consensus 127 ~l~~~~~~~VvitG~ 141 (240)
.+++..+..||..|-
T Consensus 216 ~~~~~~~~~viaeGV 230 (268)
T 3hv8_A 216 AELHEQQKLSIVPFV 230 (268)
T ss_dssp HHHHHTTCEEEECCC
T ss_pred HHHHHcCCCEEEEee
Confidence 566677888888885
Done!