BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026310
(240 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 37/202 (18%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPDFWT-------------DTESAIRRAY---- 109
FA++DGH G VANY THL ++I DF + ++ IR +
Sbjct: 57 FFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKID 116
Query: 110 -HMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEP 168
+M + L + + GSTAV ++I+ + + N GDSRAV+ +NG + DH+P
Sbjct: 117 EYMRNFSDLRNG--MDRSGSTAV-GVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP 173
Query: 169 S--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDV 217
+EK I++ GG V + RV+G LAV+RA GD K +S EP+V
Sbjct: 174 CNPREKERIQNAGGSVM-----IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEV 228
Query: 218 KVEMITDDTEFIILASDGIWKV 239
+ ++ EFIILA DGIW V
Sbjct: 229 YEILRAEEDEFIILAXDGIWDV 250
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 36/206 (17%)
Query: 62 DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFW--TDTESAIRRAYHMTDT----- 114
D++ FA++DGH G +VA Y HL LK + + + E A++ A+ D
Sbjct: 48 DDQCSFFAVYDGHGGAEVAQYCSLHL-PTFLKTVEAYGRKEFEKALKEAFLGFDATLLQE 106
Query: 115 KILEQAFVL-----------GK-GGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQL 162
K++E+ VL GK G TAV A+L +G+ L VAN GDSR V+ +NG A ++
Sbjct: 107 KVIEELKVLSGDSAGSDAEPGKDSGCTAVVALL-HGKDLYVANAGDSRCVVCRNGKALEM 165
Query: 163 SVDHEP--SKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH---------L 211
S DH+P + E + IE GG V+ + G RV+G L ++RA GD K++ +
Sbjct: 166 SFDHKPEDTVEYQRIEKAGGRVT-LDG---RVNGGLNLSRAIGDHGYKMNKSLPAEEQMI 221
Query: 212 SSEPDVKVEMITDDTEFIILASDGIW 237
S+ PD++ + + EF++LA DGIW
Sbjct: 222 SALPDIEKITVGPEDEFMVLACDGIW 247
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 99/196 (50%), Gaps = 29/196 (14%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPDF--------WTDTESAIRRAYHMTDTKIL- 117
FA++DGH G VA Y HL D+I DF + ++ IR + D +
Sbjct: 55 FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 114
Query: 118 --EQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKR 173
E+ + GSTAV +LI+ Q N GDSR ++ +N + DH+PS EK
Sbjct: 115 MSEKKHGADRSGSTAV-GVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE 173
Query: 174 LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK-IH--------LSSEPDV-KVEMIT 223
I++ GG V + RV+G LAV+RA GD K +H +S EP+V +E
Sbjct: 174 RIQNAGGSVM-----IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 224 DDTEFIILASDGIWKV 239
+D +FIILA DGIW V
Sbjct: 229 EDDQFIILACDGIWDV 244
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 99/196 (50%), Gaps = 29/196 (14%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPDF--------WTDTESAIRRAYHMTDTKIL- 117
FA++DGH G VA Y HL D+I DF + ++ IR + D +
Sbjct: 55 FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 114
Query: 118 --EQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKR 173
E+ + GSTAV +LI+ Q N GDSR ++ +N + DH+PS EK
Sbjct: 115 MSEKKHGADRSGSTAV-GVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE 173
Query: 174 LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK-IH--------LSSEPDV-KVEMIT 223
I++ GG V + RV+G LAV+RA GD K +H +S EP+V +E
Sbjct: 174 RIQNAGGSVM-----IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 224 DDTEFIILASDGIWKV 239
+D +FIILA DGIW V
Sbjct: 229 EDDQFIILACDGIWDV 244
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 56 EFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTK 115
+F Q D E+ FA++DGH G A++ TH+ I+ + E+ + A+ D
Sbjct: 27 DFAQLTD-EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKA 85
Query: 116 ILEQAFV-----LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK 170
A + L G+TA A+L +G +LVVA+VGDSRA++ + G +L++DH P +
Sbjct: 86 FSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPER 145
Query: 171 --EKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVK-VEMITDDT 226
EK I+ GGFV+ P V+G+LA+ R+ GD LK + +EP+ K +++ D
Sbjct: 146 KDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADD 205
Query: 227 EFIILASDGI 236
F++L +DGI
Sbjct: 206 SFLVLTTDGI 215
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 16/246 (6%)
Query: 1 MNGKEILQKMKVKAGFCTSALDTGKGKSKMS-KHITHGYHLVKGKSNHAMEDYLVSEFKQ 59
M +I++ + + G GK K+S +++ + K K N ED +F Q
Sbjct: 90 MEDNDIIEAHREQIGGENLYFQAGKPIPKISLENVGCASQIGKRKEN---EDRF--DFAQ 144
Query: 60 EKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQ 119
D E+ FA++DGH G A++ TH+ I+ + E+ + A+ D
Sbjct: 145 LTD-EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSH 203
Query: 120 AFV-----LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EK 172
A + L G+TA A+L +G +LVVA+VGDSRA++ + G +L++DH P + EK
Sbjct: 204 ARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEK 263
Query: 173 RLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVK-VEMITDDTEFII 230
I+ GGFV+ P V+G+LA+ R+ GD LK + +EP+ K +++ D F++
Sbjct: 264 ERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLV 323
Query: 231 LASDGI 236
L +DGI
Sbjct: 324 LTTDGI 329
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 16/186 (8%)
Query: 67 LFAIFDGHLGHDVANYLQTH----LFDNILKE-PDF-----WTDT-ESAIRRAYHMTDTK 115
F ++DGH G VANY + L + I+KE P+F W + + A+ ++ D++
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKR 173
I A GST+V A++ + VAN GDSRAV+ + LSVDH+P + E
Sbjct: 121 IETVAHAPETVGSTSVVAVVFPTH-IFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAA 179
Query: 174 LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILAS 233
IE+ GG V G RV G LA++R+ GD+ LK + +P+V + + +ILAS
Sbjct: 180 RIEAAGGKVIRWNG--ARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILAS 237
Query: 234 DGIWKV 239
DG+W V
Sbjct: 238 DGLWDV 243
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 53 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 112
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 113 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 170
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 171 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 228
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 229 EVTFMPRSREDECLILASDGLWDV 252
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 77 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 136
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 137 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 194
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 195 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 252
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 253 EVTFMPRSREDECLILASDGLWDV 276
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 70 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 129
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 130 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 187
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 188 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 245
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 246 EVTFMPRSREDECLILASDGLWDV 269
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 68 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 127
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 128 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 185
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 186 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 243
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 244 EVTFMPRSREDECLILASDGLWDV 267
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 64 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 123
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 124 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 181
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 182 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 239
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 240 EVTFMPRSREDECLILASDGLWDV 263
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 35/204 (17%)
Query: 67 LFAIFDGHLGHDVANYLQTHLFDNILKEPD--------------------------FWT- 99
F ++DGH GH VA+Y + L + +E + F T
Sbjct: 67 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTV 126
Query: 100 --DTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNG 157
+ E I RA + K+LE A GSTAV A L+ +VV+N GDSRAV+ +
Sbjct: 127 DGEIEGKIGRAVVGSSDKVLE-AVASETVGSTAVVA-LVCSSHIVVSNCGDSRAVLFRGK 184
Query: 158 VAKQLSVDHEPSKEKRL--IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEP 215
A LSVDH+P +E IE+ GG V G RV G LA++R+ GD+ LK ++ EP
Sbjct: 185 EAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEP 242
Query: 216 DVKVEMITDDTEFIILASDGIWKV 239
+V + + E +ILASDG+W V
Sbjct: 243 EVTFMPRSREDECLILASDGLWDV 266
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 67 LFAIFDGHLGHDVANYLQTH----LFDNILKEPDFWTDTES-------AIRRAYHMTDTK 115
F ++DGH G VANY + L + I KE D ++ A+ ++ D++
Sbjct: 57 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL- 174
I ++ GST+V A++ + VAN GDSRAV+ + A LSVDH+P +E
Sbjct: 117 I--ESVAPETVGSTSVVAVVFPSH-IFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 173
Query: 175 -IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILAS 233
IE+ GG V G RV G LA++R+ GD+ LK + +P+V + + +ILAS
Sbjct: 174 RIEAAGGKVIQWNG--ARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILAS 231
Query: 234 DGIWKV 239
DG+W V
Sbjct: 232 DGVWDV 237
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 67 LFAIFDGHLGHDVANYLQTH----LFDNILKEPDFWTDTES-------AIRRAYHMTDTK 115
F ++DGH G VANY + L + I KE +D ++ A+ ++ D++
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL- 174
I ++ GST+V A++ + VAN GDSRAV+ + A LSVDH+P +E
Sbjct: 114 I--ESVAPETVGSTSVVAVVFPSH-IFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 170
Query: 175 -IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILAS 233
IE+ GG V G RV G LA++R+ GD+ LK + +P+V + + +ILAS
Sbjct: 171 RIEAAGGKVIQWNG--ARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILAS 228
Query: 234 DGIWKV 239
DG+W V
Sbjct: 229 DGVWDV 234
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 67 LFAIFDGHLGHDVANYLQTH----LFDNILKEPDFWTDTES-------AIRRAYHMTDTK 115
F ++DGH G VANY + L + I KE D ++ A+ ++ D++
Sbjct: 69 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRL- 174
I ++ GST+V A++ + VAN GDSRAV+ + A LSVDH+P +E
Sbjct: 129 I--ESVAPETVGSTSVVAVVFPSH-IFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 185
Query: 175 -IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILAS 233
IE+ GG V G RV G LA++R+ GD+ LK + +P+V + + +ILAS
Sbjct: 186 RIEAAGGKVIQWNG--ARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILAS 243
Query: 234 DGIWKV 239
DG+W V
Sbjct: 244 DGVWDV 249
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 52/225 (23%)
Query: 63 NELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTE-------------------- 102
++ F +FDG +G + ++ + ++ P + TE
Sbjct: 51 DDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLD 110
Query: 103 SAIRRAYHMTDTKILEQAFVLGK--GGSTAVTAILINGQKLVVANVGDSR---AVISKNG 157
A+ Y D ++++ L K ST+VTA+L G + V ++GDSR V + NG
Sbjct: 111 QAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKG-FVAVGHLGDSRIAXGVETPNG 169
Query: 158 VAKQ-LSVDHEP--SKEKRLIESRGGFV------SNIP-------------GDVPRVDGQ 195
+ + L+VDH+P EK I GG V +N P G+ P Q
Sbjct: 170 LNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPX---Q 226
Query: 196 LAVARAFGDKSLKIH-LSSEPDVKVEMITDDTEFIILASDGIWKV 239
L +RAFG K LK + LS++PDV+V +T ILA+DG+W V
Sbjct: 227 LQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDV 271
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 138 GQKLVVA-NVGDSRA-VISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVD 193
G LV A N+GDSRA +I +G +LS DH+P+ E IE GG V DVPRVD
Sbjct: 171 GSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETF--DVPRVD 228
Query: 194 GQLAVARAFGDKSLKIHLSSEP-DVKVEMITDDTEF 228
G LA++RAFGD K + + P + KV + D +F
Sbjct: 229 GVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF 264
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 53 LVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMT 112
LVS + N + + A+FDGH G + Y H ++ K +F T + +++A
Sbjct: 32 LVSAPATSRPN-VRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF---TFAEVKKACLSL 87
Query: 113 DTKILEQAFVLGKGGSTAVTAILINGQKLVVANV 146
D +I+ + GST + + VV NV
Sbjct: 88 DAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENV 121
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 47/239 (19%)
Query: 42 KGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDT 101
KG +H ED S K +N L+ +F+G+ G+ V N++ L +L
Sbjct: 44 KGTESHPPED---SWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHA 100
Query: 102 ESAIRR----AYHMTDTKILEQ---------AFVLGK---------GGSTAVTAILINGQ 139
E+ +RR A+ + + LE + L + GG+ AV A+L+N
Sbjct: 101 EADVRRVLLQAFDVVERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLN-N 159
Query: 140 KLVVANVGDSRAVISKNGV----AKQLSVDHEPSKEKRLIE-SRGGFVSNIPGDVPRVDG 194
KL VANVG +RA++ K+ V QL+VDH E L S+ G + V + G
Sbjct: 160 KLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICG 219
Query: 195 QLAVARAFGDKSLKIHLS--------------SEPDVKVEMITDD-TEFIILASDGIWK 238
Q + R GD +K + +EP++ D T F++L S+G++K
Sbjct: 220 QEST-RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYK 277
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 107/258 (41%), Gaps = 66/258 (25%)
Query: 42 KGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDT 101
KG +H ED S K +N L+ +F+G+ G+ V N++ L +L
Sbjct: 44 KGTESHPPED---SWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHA 100
Query: 102 ESAIRR----AYHMTD----------------------------------TKILEQAFVL 123
E+ +RR A+ + + KILE+ L
Sbjct: 101 EADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTL 160
Query: 124 GK---GGSTAVTAILINGQKLVVANVGDSRAVISKNGV----AKQLSVDHEPSKEKRLIE 176
+ GG+ AV A+L+N KL VANVG +RA++ K+ V QL+VDH E L
Sbjct: 161 EREISGGAMAVVAVLLN-NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFR 219
Query: 177 -SRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLS--------------SEPDVKVEM 221
S+ G + V + GQ + R GD +K + +EP++
Sbjct: 220 LSQLGLDAGKIKQVGIICGQEST-RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQ 278
Query: 222 ITDD-TEFIILASDGIWK 238
D T F++L S+G++K
Sbjct: 279 PLDGVTGFLVLMSEGLYK 296
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 66/259 (25%)
Query: 42 KGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDT 101
KG +H ED S K +N L+ +F+G+ G+ V N++ L +L
Sbjct: 42 KGTESHPPED---SWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHA 98
Query: 102 ESAIRR----AYHMTD----------------------------------TKILEQAFVL 123
E+ +RR A+ + + KILE+ L
Sbjct: 99 EADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTL 158
Query: 124 GK---GGSTAVTAILINGQKLVVANVGDSRAVISKNGV----AKQLSVDHEPSKEKRLIE 176
+ GG+ AV A+L+N KL VANVG +RA++ K+ V QL+VDH E L
Sbjct: 159 EREISGGAMAVVAVLLN-NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFR 217
Query: 177 -SRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLS--------------SEPDVKVEM 221
S+ G + V + GQ + R GD +K + +EP++
Sbjct: 218 LSQLGLDAGKIKQVGIICGQEST-RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQ 276
Query: 222 ITDD-TEFIILASDGIWKV 239
D T F++L S+G++K
Sbjct: 277 PLDGVTGFLVLMSEGLYKA 295
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 46/165 (27%)
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVI---SKNG--VAKQLSVDHEPSK 170
+L AF G+TA A ++G L VAN GDSRA++ ++G A LS DH
Sbjct: 193 VLRVAF----SGATACVA-HVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
Query: 171 EKRLIESRGGFVSNIPGDVPRVD---GQLAVARAFGDKSLKI------------------ 209
E+ L + N V + D G L RAFGD K
Sbjct: 248 ERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLND 307
Query: 210 ---------------HLSSEPDVKVEMITDDTEFIILASDGIWKV 239
+L++EP+V + +F++LA+DG+W+
Sbjct: 308 NEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWET 352
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 46/164 (28%)
Query: 116 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVI---SKNG--VAKQLSVDHEPSK 170
+L AF G+TA A ++G L VAN GDSRA++ ++G A LS DH
Sbjct: 193 VLRVAF----SGATACVA-HVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
Query: 171 EKRLIESRGGFVSNIPGDVPRVD---GQLAVARAFGDKSLKI------------------ 209
E+ + + N V + D G L RAFGD K
Sbjct: 248 EREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLND 307
Query: 210 ---------------HLSSEPDVKVEMITDDTEFIILASDGIWK 238
+L++EP+V + +F++LA+DG+W+
Sbjct: 308 NEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 351
>pdb|3RNR|A Chain A, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
pdb|3RNR|B Chain B, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
Length = 211
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 119 QAFVLGKGGST-AVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIES 177
Q +LG+ G+T AV A+ + L A+VGD R + K G +LS+DH S E L+
Sbjct: 63 QGGILGRTGATXAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSEXVLLGR 122
Query: 178 RGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIW 237
G VP G+ + G ++L +SE + +E E +++ SDG++
Sbjct: 123 ---------GPVPGPAGE-XITSFIGIENLTEISTSEAPLPLEA----GEGVLVVSDGVY 168
Query: 238 K 238
+
Sbjct: 169 R 169
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 67 LFAIFDGHLGH---DVANYL----QTHLFDNILKEP--DFWTDTESAIRRAYHMTDTKIL 117
L A+ DG GH +VA+ L HL D+ EP D ++A+R ++
Sbjct: 53 LLALADGMGGHAAGEVASQLVIAALAHLDDD---EPGGDLLAKLDAAVRAGNSAIAAQVE 109
Query: 118 EQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVD 165
+ + G G T +TAIL G +L + ++GDSR + ++G Q++ D
Sbjct: 110 MEPDLEGMG--TTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKD 155
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 23/116 (19%)
Query: 67 LFAIFDGHLGH------------DVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDT 114
F + DG GH + YL+THL D D + +R+A+ +
Sbjct: 29 FFIVADGMGGHAGGEEASRLAVDHIRQYLETHL-------EDLQHDPVTLLRQAFLAANH 81
Query: 115 KILEQAFVLGKGGSTAVTAILI----NGQKLVVANVGDSRAVISKNGVAKQLSVDH 166
I+EQ TA++I G + A+VGDSR + +Q++ DH
Sbjct: 82 AIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDH 137
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 23/116 (19%)
Query: 67 LFAIFDGHLGH------------DVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDT 114
F + DG GH + YL+THL D D + +R+A+ +
Sbjct: 29 FFIVADGMGGHAGGEEASRLAVDHIRQYLETHL-------EDLQHDPVTLLRQAFLAANH 81
Query: 115 KILEQAFVLGKGGSTAVTAILI----NGQKLVVANVGDSRAVISKNGVAKQLSVDH 166
I+EQ TA++I G + A+VGDSR + +Q++ DH
Sbjct: 82 AIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDH 137
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 125 KGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSN 184
KG T + A+ I G ++ A+VGDSR I + G L+ DH E L+++ G
Sbjct: 100 KGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE--LVKA-GQLTEE 156
Query: 185 IPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGI 236
P+ + + ++ G + EPD+ V ++ ++ +++++ SDG+
Sbjct: 157 EAASHPQKN---IITQSIGQAN-----PVEPDLGVHLL-EEGDYLVVNSDGL 199
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 86 HLFDNILKEP--DFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVV 143
HL D+ EP D ++A+R ++ + + G G T +TAIL G +L +
Sbjct: 56 HLDDD---EPGGDLLAKLDAAVRAGNSAIAAQVEXEPDLEGXG--TTLTAILFAGNRLGL 110
Query: 144 ANVGDSRAVISKNGVAKQLSVD 165
++GDSR + ++G Q++ D
Sbjct: 111 VHIGDSRGYLLRDGELTQITKD 132
>pdb|3QYH|B Chain B, Crystal Structure Of Co-Type Nitrile Hydratase Beta-H71l
From Pseudomonas Putida.
pdb|3QYH|D Chain D, Crystal Structure Of Co-Type Nitrile Hydratase Beta-H71l
From Pseudomonas Putida.
pdb|3QYH|F Chain F, Crystal Structure Of Co-Type Nitrile Hydratase Beta-H71l
From Pseudomonas Putida.
pdb|3QYH|H Chain H, Crystal Structure Of Co-Type Nitrile Hydratase Beta-H71l
From Pseudomonas Putida
Length = 219
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 83 LQTHLFDNILKEPDFWTDTESAIRRAYH-MTDTKILEQAFVLGKGGSTAVTAILINGQKL 141
L H+F+N+L E T TE A +A T T +L A V G ST +A G +
Sbjct: 71 LWLHVFENLLVEKGVLTATEVATGKAASGKTATPVLTPAIVDGL-LSTGASAAREEGARA 129
Query: 142 VVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVS 183
A VGD V++KN V + K ++ G FV+
Sbjct: 130 RFA-VGDKVRVLNKNPVGHTRMPRYTRGKVGTVVIDHGVFVT 170
>pdb|3QYG|B Chain B, Crystal Structure Of Co-Type Nitrile Hydratase Beta-E56q
From Pseudomonas Putida.
pdb|3QYG|D Chain D, Crystal Structure Of Co-Type Nitrile Hydratase Beta-E56q
From Pseudomonas Putida.
pdb|3QYG|F Chain F, Crystal Structure Of Co-Type Nitrile Hydratase Beta-E56q
From Pseudomonas Putida.
pdb|3QYG|H Chain H, Crystal Structure Of Co-Type Nitrile Hydratase Beta-E56q
From Pseudomonas Putida
Length = 219
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 86 HLFDNILKEPDFWTDTESAIRRAYH-MTDTKILEQAFVLGKGGSTAVTAILINGQKLVVA 144
H+F+N+L E T TE A +A T T +L A V G ST +A G + A
Sbjct: 74 HVFENLLVEKGVLTATEVATGKAASGKTATPVLTPAIVDGL-LSTGASAAREEGARARFA 132
Query: 145 NVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVS 183
VGD V++KN V + K ++ G FV+
Sbjct: 133 -VGDKVRVLNKNPVGHTRMPRYTRGKVGTVVIDHGVFVT 170
>pdb|3QZ9|B Chain B, Crystal Structure Of Co-Type Nitrile Hydratase Beta-Y215f
From Pseudomonas Putida.
pdb|3QZ9|D Chain D, Crystal Structure Of Co-Type Nitrile Hydratase Beta-Y215f
From Pseudomonas Putida.
pdb|3QZ9|F Chain F, Crystal Structure Of Co-Type Nitrile Hydratase Beta-Y215f
From Pseudomonas Putida.
pdb|3QZ9|H Chain H, Crystal Structure Of Co-Type Nitrile Hydratase Beta-Y215f
From Pseudomonas Putida
Length = 219
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 86 HLFDNILKEPDFWTDTESAIRRAYH-MTDTKILEQAFVLGKGGSTAVTAILINGQKLVVA 144
H+F+N+L E T TE A +A T T +L A V G ST +A G + A
Sbjct: 74 HVFENLLVEKGVLTATEVATGKAASGKTATPVLTPAIVDGL-LSTGASAAREEGARARFA 132
Query: 145 NVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVS 183
VGD V++KN V + K ++ G FV+
Sbjct: 133 -VGDKVRVLNKNPVGHTRMPRYTRGKVGTVVIDHGVFVT 170
>pdb|3QXE|B Chain B, Crystal Structure Of Co-Type Nitrile Hydratase From
Pseudomonas Putida.
pdb|3QXE|D Chain D, Crystal Structure Of Co-Type Nitrile Hydratase From
Pseudomonas Putida.
pdb|3QXE|F Chain F, Crystal Structure Of Co-Type Nitrile Hydratase From
Pseudomonas Putida.
pdb|3QXE|H Chain H, Crystal Structure Of Co-Type Nitrile Hydratase From
Pseudomonas Putida.
pdb|3QZ5|B Chain B, Crystal Structure Of Co-Type Nitrile Hydratase Alpha-E168q
From Pseudomonas Putida.
pdb|3QZ5|D Chain D, Crystal Structure Of Co-Type Nitrile Hydratase Alpha-E168q
From Pseudomonas Putida.
pdb|3QZ5|F Chain F, Crystal Structure Of Co-Type Nitrile Hydratase Alpha-E168q
From Pseudomonas Putida.
pdb|3QZ5|H Chain H, Crystal Structure Of Co-Type Nitrile Hydratase Alpha-E168q
From Pseudomonas Putida
Length = 219
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 86 HLFDNILKEPDFWTDTESAIRRAYH-MTDTKILEQAFVLGKGGSTAVTAILINGQKLVVA 144
H+F+N+L E T TE A +A T T +L A V G ST +A G + A
Sbjct: 74 HVFENLLVEKGVLTATEVATGKAASGKTATPVLTPAIVDGL-LSTGASAAREEGARARFA 132
Query: 145 NVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVS 183
VGD V++KN V + K ++ G FV+
Sbjct: 133 -VGDKVRVLNKNPVGHTRMPRYTRGKVGTVVIDHGVFVT 170
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 22/121 (18%)
Query: 18 TSALDTGKGKSKMSKH-----ITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFD 72
T A G+G K ++H H +K +S+ + DY+ + E D + +
Sbjct: 47 TCATAQGEGNIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQ 106
Query: 73 GHLGHDVANYLQ-------------THLFDNILKEPD-FWTDTESAIRRAYHMTDTKILE 118
G L H +A++ Q T L ++ +K+ D +W D +++ YH+ + ++
Sbjct: 107 GPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDRYWPDEGASL---YHVYEVNLVS 163
Query: 119 Q 119
+
Sbjct: 164 E 164
>pdb|1IVY|A Chain A, Physiological Dimer Hpp Precursor
pdb|1IVY|B Chain B, Physiological Dimer Hpp Precursor
Length = 452
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 59 QEKDNELGLFAIFDGHLGHDVANYLQTH 86
++ DN L FA + G LG+ + + LQTH
Sbjct: 184 EQNDNSLVYFAYYHGLLGNRLWSSLQTH 211
>pdb|4AZ0|A Chain A, Crystal Structure Of Cathepsin A, Complexed With 8a.
pdb|4AZ3|A Chain A, Crystal Structure Of Cathepsin A, Complexed With 15a
Length = 300
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 59 QEKDNELGLFAIFDGHLGHDVANYLQTH 86
++ DN L FA + G LG+ + + LQTH
Sbjct: 186 EQNDNSLVYFAYYHGLLGNRLWSSLQTH 213
>pdb|3AGJ|B Chain B, Crystal Structure Of Archaeal Pelota And Gtp-bound Ef1
Alpha Complex
pdb|3AGJ|D Chain D, Crystal Structure Of Archaeal Pelota And Gtp-bound Ef1
Alpha Complex
pdb|3AGJ|F Chain F, Crystal Structure Of Archaeal Pelota And Gtp-bound Ef1
Alpha Complex
pdb|3AGJ|H Chain H, Crystal Structure Of Archaeal Pelota And Gtp-bound Ef1
Alpha Complex
Length = 358
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 173 RLIESRGGFVSNIPGDVP 190
RL+ES GG V IPGD P
Sbjct: 315 RLVESMGGRVIIIPGDSP 332
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,168,616
Number of Sequences: 62578
Number of extensions: 289753
Number of successful extensions: 784
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 710
Number of HSP's gapped (non-prelim): 60
length of query: 240
length of database: 14,973,337
effective HSP length: 96
effective length of query: 144
effective length of database: 8,965,849
effective search space: 1291082256
effective search space used: 1291082256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)