Query 026311
Match_columns 240
No_of_seqs 165 out of 1091
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 10:31:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026311.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026311hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 76.9 15 0.0011 28.9 12.5 20 154-173 358-377 (447)
2 d4sgbi_ g.69.1.1 (I:) Plant ch 45.9 2.8 0.00021 23.7 0.6 10 228-237 24-33 (51)
3 d1tiha_ g.69.1.1 (A:) Multidom 44.0 3.9 0.00028 23.3 1.0 10 228-237 25-34 (53)
4 d1pjua1 g.69.1.1 (A:16-74) Wou 25.2 8.8 0.00064 22.2 0.4 10 228-237 33-42 (59)
5 d1pw4a_ f.38.1.1 (A:) Glycerol 21.2 1.6E+02 0.012 22.2 13.3 37 84-121 68-104 (447)
6 d1oyvi_ g.69.1.1 (I:) Wound-in 15.1 22 0.0016 23.4 0.7 10 228-237 48-57 (116)
7 d1pv7a_ f.38.1.2 (A:) Lactose 14.2 1.7E+02 0.012 21.3 6.3 12 160-171 333-344 (417)
8 d1pv7a_ f.38.1.2 (A:) Lactose 13.8 2.2E+02 0.016 20.6 6.9 14 179-192 149-162 (417)
9 d2e74g1 f.23.26.1 (G:9-35) Pet 11.0 92 0.0067 14.5 2.9 19 75-93 2-20 (27)
10 d1iwga8 f.35.1.1 (A:513-566,A: 10.9 2.6E+02 0.019 19.8 7.8 26 183-208 96-121 (222)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=76.92 E-value=15 Score=28.87 Aligned_cols=20 Identities=10% Similarity=-0.042 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHhhcCceee
Q 026311 154 NGVCQSFNAWAIKKRGPVFV 173 (240)
Q Consensus 154 t~ia~~l~~~al~~~g~~~~ 173 (240)
.......+....+..++...
T Consensus 358 ~~~~~~~~~~~~~~~p~~~~ 377 (447)
T d1pw4a_ 358 YGPVMLIGLHALELAPKKAA 377 (447)
T ss_dssp THHHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHHHHHHHHHcCHHHH
Confidence 33444455566666665543
No 2
>d4sgbi_ g.69.1.1 (I:) Plant chymotrypsin inhibitor {Potato tuber (Solanum tuberosum) [TaxId: 4113]}
Probab=45.87 E-value=2.8 Score=23.72 Aligned_cols=10 Identities=40% Similarity=0.753 Sum_probs=8.3
Q ss_pred CCCCcccCCC
Q 026311 228 SESESDAENP 237 (240)
Q Consensus 228 ~~~~~~~~~~ 237 (240)
-|-||||+||
T Consensus 24 CeGeSdp~np 33 (51)
T d4sgbi_ 24 CEGQSDPKKP 33 (51)
T ss_dssp EECCBCTTSC
T ss_pred eCCCCCCCCC
Confidence 4678999998
No 3
>d1tiha_ g.69.1.1 (A:) Multidomain proteinase inhibitor {Winged tobacco (Nicotiana alata) [TaxId: 4087]}
Probab=43.96 E-value=3.9 Score=23.26 Aligned_cols=10 Identities=60% Similarity=0.890 Sum_probs=8.2
Q ss_pred CCCCcccCCC
Q 026311 228 SESESDAENP 237 (240)
Q Consensus 228 ~~~~~~~~~~ 237 (240)
-|-||||+||
T Consensus 25 CeGesdp~nP 34 (53)
T d1tiha_ 25 CEGESDPRNP 34 (53)
T ss_dssp ECCCCCSSSS
T ss_pred eCCCCCCCCC
Confidence 5778899988
No 4
>d1pjua1 g.69.1.1 (A:16-74) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=25.19 E-value=8.8 Score=22.17 Aligned_cols=10 Identities=50% Similarity=0.800 Sum_probs=7.9
Q ss_pred CCCCcccCCC
Q 026311 228 SESESDAENP 237 (240)
Q Consensus 228 ~~~~~~~~~~ 237 (240)
-|-||||+||
T Consensus 33 CeGesdp~np 42 (59)
T d1pjua1 33 CEGESDPKRP 42 (59)
T ss_dssp EECCBBTTBC
T ss_pred eCCcCCCCCC
Confidence 4678899888
No 5
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=21.25 E-value=1.6e+02 Score=22.21 Aligned_cols=37 Identities=5% Similarity=0.014 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q 026311 84 AVFVLSSTVVLQAATLGDFPAPMSLCAITSLIGVFVTT 121 (240)
Q Consensus 84 aa~~~a~~~vl~~~~~~~~~~~~~~~~~~~l~g~l~l~ 121 (240)
..+.+++......++.+|+. +-.......+..++..+
T Consensus 68 ~~~~~~~~~~~~G~l~Dr~g-~r~~~~~~~~~~~~~~~ 104 (447)
T d1pw4a_ 68 ISIAYGFSKFIMGSVSDRSN-PRVFLPAGLILAAAVML 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-chHHHHHHHHHHHHHHh
Confidence 34455555666666666664 33333344444433333
No 6
>d1oyvi_ g.69.1.1 (I:) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=15.11 E-value=22 Score=23.40 Aligned_cols=10 Identities=50% Similarity=0.800 Sum_probs=8.0
Q ss_pred CCCCcccCCC
Q 026311 228 SESESDAENP 237 (240)
Q Consensus 228 ~~~~~~~~~~ 237 (240)
=|-||||+||
T Consensus 48 CeGesdp~nP 57 (116)
T d1oyvi_ 48 CEGESDPKRP 57 (116)
T ss_dssp EECCBCSSSC
T ss_pred ecCccCCCCC
Confidence 4678899998
No 7
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=14.23 E-value=1.7e+02 Score=21.30 Aligned_cols=12 Identities=0% Similarity=-0.213 Sum_probs=6.0
Q ss_pred HHHHHHhhcCce
Q 026311 160 FNAWAIKKRGPV 171 (240)
Q Consensus 160 l~~~al~~~g~~ 171 (240)
.+....+..++.
T Consensus 333 ~~~~~~~~~~~~ 344 (417)
T d1pv7a_ 333 CFKYITSQFEVR 344 (417)
T ss_dssp HHHHHHHHSCGG
T ss_pred HHHHHHHHCCHh
Confidence 344555555543
No 8
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=13.82 E-value=2.2e+02 Score=20.57 Aligned_cols=14 Identities=7% Similarity=0.226 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHh
Q 026311 179 IATVISVILSAITL 192 (240)
Q Consensus 179 l~Pv~a~l~~~l~l 192 (240)
.....+...+....
T Consensus 149 ~~~~~~~~~~~~l~ 162 (417)
T d1pv7a_ 149 VGWALGASIVGIMF 162 (417)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cccccccccccccc
Confidence 33444444444433
No 9
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=10.98 E-value=92 Score=14.51 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 026311 75 IIGCVYLLAAVFVLSSTVV 93 (240)
Q Consensus 75 ~~G~~l~l~aa~~~a~~~v 93 (240)
.+|.+..-++.++||.|.-
T Consensus 2 vlgli~~tl~glf~aayqq 20 (27)
T d2e74g1 2 VLGLVFATLGGLFYAAYQQ 20 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHHH
Confidence 3577777788888888753
No 10
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=10.91 E-value=2.6e+02 Score=19.76 Aligned_cols=26 Identities=23% Similarity=0.258 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCccchhhHHHHHHH
Q 026311 183 ISVILSAITLGDSIDIGSLSGMFLMF 208 (240)
Q Consensus 183 ~a~l~~~l~lgE~~~~~~iiG~~lIl 208 (240)
.+.+.+..+.|.+++....+|.++.+
T Consensus 96 ~~~~~~l~~~g~~~~~~~~~g~i~l~ 121 (222)
T d1iwga8 96 IGALLAATFRGLTNDVYFQVGLLTTI 121 (222)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCchhhhhcccccchh
Confidence 45666777889999998888777633
Done!