Query 026317
Match_columns 240
No_of_seqs 292 out of 1655
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 10:40:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix5_A Acyl-coenzyme A oxidase 100.0 7.5E-42 2.6E-46 305.0 23.6 231 4-235 4-235 (436)
2 2d29_A Acyl-COA dehydrogenase; 100.0 1.7E-39 5.7E-44 285.8 22.8 191 49-239 1-201 (387)
3 3ii9_A Glutaryl-COA dehydrogen 100.0 3.7E-40 1.3E-44 290.8 17.4 194 46-239 10-208 (396)
4 3p4t_A Putative acyl-COA dehyd 100.0 2.4E-39 8.3E-44 286.2 21.3 193 47-239 18-216 (403)
5 2eba_A Putative glutaryl-COA d 100.0 1.9E-39 6.6E-44 285.2 20.5 189 46-235 2-192 (385)
6 3sf6_A Glutaryl-COA dehydrogen 100.0 1.9E-39 6.6E-44 286.8 19.9 194 43-239 18-215 (403)
7 3swo_A Glutaryl-COA dehydrogen 100.0 1.7E-39 5.9E-44 286.8 19.0 192 45-239 16-210 (399)
8 3nf4_A Acyl-COA dehydrogenase; 100.0 6.7E-39 2.3E-43 281.9 22.5 187 52-239 13-203 (387)
9 3pfd_A Acyl-COA dehydrogenase; 100.0 2.5E-39 8.6E-44 285.2 19.6 189 50-239 14-208 (393)
10 2vig_A Short-chain specific ac 100.0 7.4E-39 2.5E-43 282.0 22.0 189 51-239 2-196 (391)
11 1ukw_A Acyl-COA dehydrogenase; 100.0 8.7E-39 3E-43 280.4 21.8 185 51-236 1-189 (379)
12 1buc_A Butyryl-COA dehydrogena 100.0 9.9E-39 3.4E-43 280.4 20.6 186 51-236 1-194 (383)
13 1rx0_A Acyl-COA dehydrogenase 100.0 3.4E-38 1.2E-42 278.0 23.0 186 50-236 14-202 (393)
14 1egd_A Medium chain acyl-COA d 100.0 1.3E-38 4.5E-43 280.9 20.1 189 50-239 11-208 (396)
15 2jif_A Short/branched chain sp 100.0 2.9E-38 9.9E-43 279.4 22.1 187 49-236 23-213 (404)
16 3r7k_A Probable acyl COA dehyd 100.0 1.5E-38 5.1E-43 281.1 20.1 190 50-239 24-219 (403)
17 2dvl_A Acyl-COA dehydrogenase; 100.0 2.5E-38 8.5E-43 276.9 21.1 184 54-239 2-188 (372)
18 2pg0_A Acyl-COA dehydrogenase; 100.0 6.4E-38 2.2E-42 275.5 22.3 187 51-239 5-201 (385)
19 1ivh_A Isovaleryl-COA dehydrog 100.0 4.7E-38 1.6E-42 277.2 19.8 184 53-236 11-202 (394)
20 1siq_A GCD, glutaryl-COA dehyd 100.0 1.2E-37 4.2E-42 274.3 20.1 191 47-239 6-201 (392)
21 3mpi_A Glutaryl-COA dehydrogen 100.0 9.1E-38 3.1E-42 275.5 17.3 185 51-236 1-194 (397)
22 4hr3_A Putative acyl-COA dehyd 100.0 1.9E-37 6.4E-42 275.0 17.6 190 50-239 4-222 (415)
23 2z1q_A Acyl-COA dehydrogenase; 100.0 6.8E-37 2.3E-41 281.5 19.7 197 16-235 10-210 (577)
24 1r2j_A Protein FKBI; polyketid 100.0 2E-36 6.7E-41 264.4 18.4 173 64-239 2-177 (366)
25 2uxw_A VERY-long-chain specifi 100.0 5.8E-36 2E-40 276.3 19.3 203 16-239 26-245 (607)
26 3owa_A Acyl-COA dehydrogenase; 100.0 4.4E-36 1.5E-40 276.5 18.4 181 54-236 32-216 (597)
27 2c12_A Nitroalkane oxidase; ox 100.0 2.4E-35 8.4E-40 263.2 19.6 185 51-236 2-217 (439)
28 3mkh_A Nitroalkane oxidase; ox 100.0 5.5E-36 1.9E-40 267.3 15.3 186 49-236 1-215 (438)
29 2wbi_A Acyl-COA dehydrogenase 100.0 7.4E-34 2.5E-38 252.9 16.4 190 47-239 15-229 (428)
30 3m9v_A FAD-dependent oxidoredu 100.0 2.1E-33 7.1E-38 250.7 16.8 183 51-239 16-210 (439)
31 3mxl_A Nitrososynthase; flavin 100.0 1.9E-33 6.5E-38 247.5 13.0 183 51-239 5-199 (395)
32 2or0_A Hydroxylase; APC7385, r 100.0 5.1E-32 1.8E-36 240.0 15.6 173 52-239 15-194 (414)
33 2jbr_A P-hydroxyphenylacetate 100.0 1.6E-30 5.5E-35 230.9 17.5 165 60-239 38-206 (422)
34 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.9E-30 9.8E-35 227.2 17.8 165 60-239 10-178 (394)
35 1w07_A Acyl-COA oxidase; oxido 99.9 1.5E-26 5.2E-31 215.4 10.1 174 52-234 23-208 (659)
36 3djl_A Protein AIDB; alpha hel 99.9 1.1E-24 3.6E-29 198.6 7.3 138 89-235 89-243 (541)
37 2ddh_A Acyl-COA oxidase; beta 99.9 4E-21 1.4E-25 178.9 13.5 166 56-234 26-209 (661)
38 1u8v_A Gamma-aminobutyrate met 99.7 4.1E-18 1.4E-22 153.5 10.3 90 146-236 119-223 (490)
39 2yyk_A 4-hydroxyphenylacetate- 99.7 7.2E-17 2.4E-21 145.1 10.5 82 153-236 123-217 (481)
40 3hwc_A Chlorophenol-4-monooxyg 99.6 2.4E-15 8.3E-20 135.6 7.1 85 150-236 127-224 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 98.6 5.2E-08 1.8E-12 88.0 7.2 83 154-236 134-225 (517)
No 1
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=7.5e-42 Score=305.00 Aligned_cols=231 Identities=76% Similarity=1.229 Sum_probs=197.1
Q ss_pred CCCCCchhhhhhccccccCCCcccccccCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHH
Q 026317 4 HSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWE 83 (240)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~ 83 (240)
.++.++.....+.+..+...+..+.....+...+....|+...|++.|++.++++++++++.+|+|+++.+.|...+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~~r~f~~~~~~p~~~~~~~ 83 (436)
T 2ix5_A 4 LSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWE 83 (436)
T ss_dssp -------------CCSSSSSCCCCHHHHCCSSCCTTSCCCCCSCTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhhhhhhccccccchhhcCCChhhhhhhccccCCCCCCCCcccchhhcCCCCCHHHHHHHHHHHHHHHhhCChhhHHHHh
Confidence 34455555666777788887777766555555555566777778999999999999999999999999999988877777
Q ss_pred hCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchh
Q 026317 84 KAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162 (240)
Q Consensus 84 ~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~ 162 (240)
.+.+|.++|++|++.||+++ +| +|||.|+++.+.+.++|+++++|+++++++.+|..++...|..+|+++||++|||+
T Consensus 84 ~~~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~ 162 (436)
T 2ix5_A 84 KAEFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPS 162 (436)
T ss_dssp HTCCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 88999999999999999999 98 99999999999999999999999998877777766677788899999999999999
Q ss_pred hhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCCCCCEEEEEEEeCCCCCeeEEEEeCC
Q 026317 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYANQSI 235 (240)
Q Consensus 163 l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~ 235 (240)
+++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||+.+|||++|+|++++++++++|+||++
T Consensus 163 l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~~~~~~flV~~~ 235 (436)
T 2ix5_A 163 LAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKD 235 (436)
T ss_dssp HHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTTSSEEEEEEETT
T ss_pred HhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCCCcEEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999875567999999987
No 2
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=1.7e-39 Score=285.77 Aligned_cols=191 Identities=36% Similarity=0.499 Sum_probs=175.6
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHc
Q 026317 49 YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIAR 127 (240)
Q Consensus 49 ~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~ 127 (240)
|.|++.++++++++++.+++|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|++++
T Consensus 1 ~~m~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 80 (387)
T 2d29_A 1 MGLWFEEGAEERQVLGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAY 80 (387)
T ss_dssp -CCTTSCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 3588899999999999999999999999988888899999999999999999999 999999999999999999999999
Q ss_pred cCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeec
Q 026317 128 VDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207 (240)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs 207 (240)
+|+++++.+.+|..++...|..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 160 (387)
T 2d29_A 81 YDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFIT 160 (387)
T ss_dssp HCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccC
Confidence 99998877777654567788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCC-------CCeeEEEEeCCc--eec
Q 026317 208 NSTFADVLVIFARNTTT-------NQINGYANQSIK--FVL 239 (240)
Q Consensus 208 ~~~~Ad~~~v~a~~~~~-------~~~~~flVp~~~--~~~ 239 (240)
|+..||+++|+|+++++ .++++|+||++. ++|
T Consensus 161 ~~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v 201 (387)
T 2d29_A 161 QGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKV 201 (387)
T ss_dssp TTTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEE
T ss_pred CCCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeec
Confidence 99999999999998633 269999999873 544
No 3
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=3.7e-40 Score=290.79 Aligned_cols=194 Identities=33% Similarity=0.534 Sum_probs=173.7
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHH
Q 026317 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAE 124 (240)
Q Consensus 46 ~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~ 124 (240)
.|++.|++.++++++++++.+|+|+++.+.|.+.+.++.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+
T Consensus 10 ~~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~ee 89 (396)
T 3ii9_A 10 DDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIARE 89 (396)
T ss_dssp TSTTCGGGGSCHHHHHHHHHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CcccccCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHH
Confidence 4677899999999999999999999999999988889999999999999999999999 999999999999999999999
Q ss_pred HHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEe
Q 026317 125 IARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKR 204 (240)
Q Consensus 125 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~ 204 (240)
++++|+++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 169 (396)
T 3ii9_A 90 VERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKM 169 (396)
T ss_dssp HHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEE
T ss_pred HHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEE
Confidence 99999998887777765666778899999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCEEEEEEEeCCC--CCeeEEEEeCCc--eec
Q 026317 205 WIGNSTFADVLVIFARNTTT--NQINGYANQSIK--FVL 239 (240)
Q Consensus 205 ~vs~~~~Ad~~~v~a~~~~~--~~~~~flVp~~~--~~~ 239 (240)
||||+.+||+++|.|+++++ .++++|+||+++ ++|
T Consensus 170 ~vs~a~~Ad~~~v~a~~~~~g~~g~~~flV~~~~pGv~v 208 (396)
T 3ii9_A 170 WITNSPIADVFVVWAKLDEDGRDEIRGFILEKGCKGLSA 208 (396)
T ss_dssp EEETGGGCSEEEEEEEEEETTEEEEEEEEEETTCTTEEC
T ss_pred eECCCccCCEEEEEEEecCCCCCceEEEEEecCCCCeEe
Confidence 99999999999999998522 358999999986 554
No 4
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=2.4e-39 Score=286.18 Aligned_cols=193 Identities=22% Similarity=0.257 Sum_probs=175.9
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHH
Q 026317 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEI 125 (240)
Q Consensus 47 ~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~l 125 (240)
+...|++.++++++++++.+|+|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|++
T Consensus 18 ~~~~M~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 97 (403)
T 3p4t_A 18 GPGSMSIWTTAEREALRKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEM 97 (403)
T ss_dssp -----CTTSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHH
Confidence 445588999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HccCCcc-hHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEe
Q 026317 126 ARVDASC-STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKR 204 (240)
Q Consensus 126 a~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~ 204 (240)
+++|+++ ++.+.+|..++...|..+|+++||++||+++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 177 (403)
T 3p4t_A 98 HYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKT 177 (403)
T ss_dssp HHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEE
T ss_pred HHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEE
Confidence 9999998 776666665677788999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCEEEEEEEeCCC--CCeeEEEEeCCc--eec
Q 026317 205 WIGNSTFADVLVIFARNTTT--NQINGYANQSIK--FVL 239 (240)
Q Consensus 205 ~vs~~~~Ad~~~v~a~~~~~--~~~~~flVp~~~--~~~ 239 (240)
||||+..||+++|+|+++++ +++++|+||+++ ++|
T Consensus 178 ~vs~a~~Ad~~~v~a~~~~~~~~g~~~flV~~~~pGv~v 216 (403)
T 3p4t_A 178 YITSGVRADYVVTAARTGGPGAGGVSLIVVDKGTPGFEV 216 (403)
T ss_dssp EEETTTTCSEEEEEEECSSSSGGGEEEEEEETTCTTEEE
T ss_pred EecCCcccCEEEEEEEeCCCCCCceEEEEEeCCCCCeEe
Confidence 99999999999999998642 579999999986 654
No 5
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-39 Score=285.17 Aligned_cols=189 Identities=37% Similarity=0.663 Sum_probs=172.6
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHH
Q 026317 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAE 124 (240)
Q Consensus 46 ~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~ 124 (240)
.|.+.|++.++++++++++.+++|+.+.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+
T Consensus 2 ~~~~~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 81 (385)
T 2eba_A 2 LDFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYE 81 (385)
T ss_dssp CCTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred CcccccCCCCCHHHHHHHHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHH
Confidence 3556688899999999999999999999999888888889999999999999999999 999999999999999999999
Q ss_pred HHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCc-CCCceEEEEeCCEEEEeeeE
Q 026317 125 IARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDA-SALNTTATKVEGGWILEGQK 203 (240)
Q Consensus 125 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~-~~~~t~a~~~~~g~~LnG~K 203 (240)
++++|+++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+ ..++|+|++++|||+|||+|
T Consensus 82 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K 161 (385)
T 2eba_A 82 LERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTK 161 (385)
T ss_dssp HHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEE
T ss_pred HHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeee
Confidence 99999999887777765666788899999999999999999999999999999999999 99999999999999999999
Q ss_pred eeecCCCCCCEEEEEEEeCCCCCeeEEEEeCC
Q 026317 204 RWIGNSTFADVLVIFARNTTTNQINGYANQSI 235 (240)
Q Consensus 204 ~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~ 235 (240)
.||||+..||+++|.|++++. .+++|+||++
T Consensus 162 ~~~s~~~~Ad~~~v~a~~~~g-~~~~flV~~~ 192 (385)
T 2eba_A 162 MWITNGNLAHLAVIWAKDEGG-EVLGFLVPTD 192 (385)
T ss_dssp EEEETTTTCSEEEEEEECC----EEEEEEETT
T ss_pred eccCCCcccCEEEEEEEeCCC-cEEEEEEeCC
Confidence 999999999999999998632 3899999987
No 6
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.9e-39 Score=286.81 Aligned_cols=194 Identities=37% Similarity=0.643 Sum_probs=181.0
Q ss_pred CCCCCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCC-HHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHH
Q 026317 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP-FHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAI 120 (240)
Q Consensus 43 ~~~~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~ 120 (240)
..+.|+..|++.++++++++++.+|+|+.+.+.|.+.+.++.+.+| .++|++|++.||+++ + ++|||.|+++.+++.
T Consensus 18 ~~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~ 96 (403)
T 3sf6_A 18 RGADDLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGL 96 (403)
T ss_dssp CCHHHHHTCGGGSCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHH
T ss_pred CCCcchhccCCCCCHHHHHHHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHH
Confidence 3445778899999999999999999999999999998899999999 999999999999999 9 999999999999999
Q ss_pred HHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEe
Q 026317 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILE 200 (240)
Q Consensus 121 v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~Ln 200 (240)
++|+++++|+++++++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+||
T Consensus 97 v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~ln 176 (403)
T 3sf6_A 97 ACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILT 176 (403)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEE
T ss_pred HHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEE
Confidence 99999999999888777776666788999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeeecCCCCCCEEEEEEEeCCCCCeeEEEEeCCc--eec
Q 026317 201 GQKRWIGNSTFADVLVIFARNTTTNQINGYANQSIK--FVL 239 (240)
Q Consensus 201 G~K~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~~--~~~ 239 (240)
|+|.||||+..||+++|+|+++ +++++|+||++. ++|
T Consensus 177 G~K~~is~a~~Ad~~~v~ar~~--~g~~~flV~~~~pGv~v 215 (403)
T 3sf6_A 177 GTKMWITNGSVADVAVVWARTD--EGIRGFVVPTDTPGFTA 215 (403)
T ss_dssp EEEEEEETGGGCSEEEEEEEET--TEEEEEEEETTSTTEEE
T ss_pred EEEEeecCCcccCEEEEEEEeC--CceEEEEEECCCCCeEe
Confidence 9999999999999999999986 469999999986 554
No 7
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-39 Score=286.76 Aligned_cols=192 Identities=33% Similarity=0.635 Sum_probs=180.1
Q ss_pred CCCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHH
Q 026317 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIA 123 (240)
Q Consensus 45 ~~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e 123 (240)
+.|+++|++.++++++++++.+|+|+.+++.|.+.+.++.+.+|.++|++|++.||+++ + ++|||.|+++.+++.++|
T Consensus 16 ~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~e 94 (399)
T 3swo_A 16 PLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACM 94 (399)
T ss_dssp HHHHHTGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHH
Confidence 45788899999999999999999999999999988889999999999999999999999 9 999999999999999999
Q ss_pred HHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeE
Q 026317 124 EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203 (240)
Q Consensus 124 ~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K 203 (240)
+++++|+++++++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|++++|||+|||+|
T Consensus 95 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K 174 (399)
T 3swo_A 95 ELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTK 174 (399)
T ss_dssp HHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEE
T ss_pred HHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEE
Confidence 99999999888777776677788999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCEEEEEEEeCCCCCeeEEEEeCCc--eec
Q 026317 204 RWIGNSTFADVLVIFARNTTTNQINGYANQSIK--FVL 239 (240)
Q Consensus 204 ~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~~--~~~ 239 (240)
.||||+..||+++|.|+++ +++++|+||+++ ++|
T Consensus 175 ~~vs~a~~Ad~~~v~a~~~--~g~~~flV~~~~pGv~v 210 (399)
T 3swo_A 175 MWITNGNLADVATVWAQTD--DGIRGFLVPTDTPGFTA 210 (399)
T ss_dssp EEEETTTTCSEEEEEEBCT--TSCEEEEEETTSTTEEE
T ss_pred EeECCCCccCEEEEEEEeC--CceEEEEEeCCCCCeEe
Confidence 9999999999999999986 569999999886 554
No 8
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=6.7e-39 Score=281.86 Aligned_cols=187 Identities=28% Similarity=0.429 Sum_probs=174.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCC
Q 026317 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDA 130 (240)
Q Consensus 52 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~ 130 (240)
++.++++++++++.+++|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++|+
T Consensus 13 ~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~ 92 (387)
T 3nf4_A 13 RLLPSQEAAELIELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWA 92 (387)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCc
Confidence 5778999999999999999999999999899999999999999999999999 999999999999999999999999999
Q ss_pred cchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCC
Q 026317 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210 (240)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~ 210 (240)
++++++.+|. ++...+..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||+.
T Consensus 93 ~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~ 171 (387)
T 3nf4_A 93 SVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGG 171 (387)
T ss_dssp HHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTT
T ss_pred hHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCc
Confidence 9988777774 667788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEeC-CCCCeeEEEEeCCc--eec
Q 026317 211 FADVLVIFARNT-TTNQINGYANQSIK--FVL 239 (240)
Q Consensus 211 ~Ad~~~v~a~~~-~~~~~~~flVp~~~--~~~ 239 (240)
.||+++|+|+++ +.+++++|+||+++ ++|
T Consensus 172 ~Ad~~~v~a~~~~~~~g~~~flV~~~~pGv~~ 203 (387)
T 3nf4_A 172 KADFYTLFARTGEGSRGVSCFLVPADQPGLSF 203 (387)
T ss_dssp TCSEEEEEEECC--CCCEEEEEEETTCTTEEE
T ss_pred ccCEEEEEEEeCCCCCceEEEEEECCCCCeEe
Confidence 999999999986 33579999999986 554
No 9
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2.5e-39 Score=285.19 Aligned_cols=189 Identities=34% Similarity=0.446 Sum_probs=168.4
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 50 ~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
-|+|.++++++++++.+|+|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++
T Consensus 14 ~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~ 93 (393)
T 3pfd_A 14 FELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARV 93 (393)
T ss_dssp --------CHHHHHHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTT
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhh
Confidence 378889999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred CCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecC
Q 026317 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~ 208 (240)
|+++++++..| .++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||
T Consensus 94 ~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 172 (393)
T 3pfd_A 94 DCSASLIPAVN-KLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITN 172 (393)
T ss_dssp CHHHHHHHHHH-HHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecC
Confidence 99988866655 35666788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC---CCeeEEEEeCCc--eec
Q 026317 209 STFADVLVIFARNTTT---NQINGYANQSIK--FVL 239 (240)
Q Consensus 209 ~~~Ad~~~v~a~~~~~---~~~~~flVp~~~--~~~ 239 (240)
+.+||+++|+|+++++ .++++|+||+++ ++|
T Consensus 173 ~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v 208 (393)
T 3pfd_A 173 GGKSTWYTVMAVTDPDKGANGISAFMVHKDDEGFTV 208 (393)
T ss_dssp TTTCSEEEEEEESCGGGGGGGEEEEEEETTSTTEEE
T ss_pred CcccCEEEEEEEeCCCCCCCceEEEEEECCCCCeEe
Confidence 9999999999998643 479999999986 544
No 10
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=7.4e-39 Score=282.01 Aligned_cols=189 Identities=32% Similarity=0.438 Sum_probs=172.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccC
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVD 129 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~ 129 (240)
|++.++++++++++.+++|+.+.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++|
T Consensus 2 ~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 81 (391)
T 2vig_A 2 QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGC 81 (391)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhc
Confidence 56778999999999999999999999888888899999999999999999999 99999999999999999999999999
Q ss_pred CcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCC
Q 026317 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (240)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~ 209 (240)
+++++++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 161 (391)
T 2vig_A 82 ASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNA 161 (391)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCC
Confidence 98888777774456778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEEeCCC---CCeeEEEEeCCc--eec
Q 026317 210 TFADVLVIFARNTTT---NQINGYANQSIK--FVL 239 (240)
Q Consensus 210 ~~Ad~~~v~a~~~~~---~~~~~flVp~~~--~~~ 239 (240)
..||+++|+|+++++ .++++|+||+++ ++|
T Consensus 162 ~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v 196 (391)
T 2vig_A 162 WEASAAVVFASTDRALQNKSISAFLVPMPTPGLTL 196 (391)
T ss_dssp TTCSEEEEEEECCSSSTTSCEEEEEEESSCTTEEE
T ss_pred CcCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEe
Confidence 999999999998532 368999999976 654
No 11
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=8.7e-39 Score=280.45 Aligned_cols=185 Identities=30% Similarity=0.444 Sum_probs=172.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccC
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVD 129 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~ 129 (240)
|++.++++++++++.+++|+++.+.|.+.+.|+.+.+|.++|++|.+.||+++ +|++|||.|+++.+++.++|+++++|
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~ 80 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYAC 80 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 67789999999999999999999999888888889999999999999999999 99999999999999999999999999
Q ss_pred CcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCC
Q 026317 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (240)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~ 209 (240)
+++++.+.+| .++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||+
T Consensus 81 ~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 159 (379)
T 1ukw_A 81 MGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNG 159 (379)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred chHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCC
Confidence 9988777766 467778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEEeCCC---CCeeEEEEeCCc
Q 026317 210 TFADVLVIFARNTTT---NQINGYANQSIK 236 (240)
Q Consensus 210 ~~Ad~~~v~a~~~~~---~~~~~flVp~~~ 236 (240)
..||+++|+|+++++ .++++|+||++.
T Consensus 160 ~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~ 189 (379)
T 1ukw_A 160 GEAEWVVVFATVNPELRHKGVVALVVERGT 189 (379)
T ss_dssp TTEEEEEEEEESCGGGGGGGEEEEEEETTC
T ss_pred CcCCEEEEEEEcCCCCCCCceEEEEEeCCC
Confidence 999999999998532 468999999874
No 12
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=9.9e-39 Score=280.42 Aligned_cols=186 Identities=30% Similarity=0.402 Sum_probs=173.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCC---CCHHHHHHHHHHHH
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPG---HSVTGAAIAIAEIA 126 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g---~~~~~~~~v~e~la 126 (240)
|++.++++++++++.+++|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.| +++.+++.++|+++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~ 80 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELA 80 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHH
Confidence 67889999999999999999999999988888999999999999999999999 999999999 99999999999999
Q ss_pred ccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEe-CCEEEEeeeEee
Q 026317 127 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRW 205 (240)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~-~~g~~LnG~K~~ 205 (240)
++|+++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|||+|||+|.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~ 160 (383)
T 1buc_A 81 KYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIF 160 (383)
T ss_dssp HHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEE
T ss_pred hhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEec
Confidence 9999988877777556778889999999999999999999999999999999999999999999999 999999999999
Q ss_pred ecCCCCCCEEEEEEEeCCC---CCeeEEEEeCCc
Q 026317 206 IGNSTFADVLVIFARNTTT---NQINGYANQSIK 236 (240)
Q Consensus 206 vs~~~~Ad~~~v~a~~~~~---~~~~~flVp~~~ 236 (240)
|||+..||+++|+|+++++ .++++|+||++.
T Consensus 161 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~ 194 (383)
T 1buc_A 161 ITNGGAADIYIVFAMTDKSKGNHGITAFILEDGT 194 (383)
T ss_dssp EETTTTCSEEEEEEESCSSSSTTSEEEEEEETTC
T ss_pred cCCCCcCCEEEEEEEeCCCCCCCceEEEEEECCC
Confidence 9999999999999998633 369999999873
No 13
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.4e-38 Score=277.98 Aligned_cols=186 Identities=28% Similarity=0.406 Sum_probs=172.1
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 50 ~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
.|++.++++++++++.+|+|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++
T Consensus 14 ~~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 93 (393)
T 1rx0_A 14 DPSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATG 93 (393)
T ss_dssp CTTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHh
Confidence 456678999999999999999999999888888889999999999999999999 9999999999999999999999999
Q ss_pred CCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecC
Q 026317 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~ 208 (240)
|+++++.+.+|. ++...|..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||
T Consensus 94 ~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~ 172 (393)
T 1rx0_A 94 CTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISG 172 (393)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecC
Confidence 998887777664 5667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC--CCeeEEEEeCCc
Q 026317 209 STFADVLVIFARNTTT--NQINGYANQSIK 236 (240)
Q Consensus 209 ~~~Ad~~~v~a~~~~~--~~~~~flVp~~~ 236 (240)
+..||+++|+|+++++ .++++|+||++.
T Consensus 173 a~~Ad~~~v~a~~~~~~~~g~~~flV~~~~ 202 (393)
T 1rx0_A 173 AGESDIYVVMCRTGGPGPKGISCIVVEKGT 202 (393)
T ss_dssp TTTCSEEEEEEESSSSSGGGEEEEEEETTC
T ss_pred CccCCEEEEEEEcCCCCCCceEEEEEeCCC
Confidence 9999999999998532 368999999864
No 14
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.3e-38 Score=280.86 Aligned_cols=189 Identities=26% Similarity=0.412 Sum_probs=174.3
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 50 ~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
.|++.+++++.++++.+++|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++
T Consensus 11 ~m~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 90 (396)
T 1egd_A 11 GFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYG 90 (396)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhh
Confidence 588889999999999999999999998888888899999999999999999999 9999999999999999999999999
Q ss_pred CCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecC
Q 026317 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~ 208 (240)
|+++++.+ +|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||
T Consensus 91 ~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 169 (396)
T 1egd_A 91 CTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITN 169 (396)
T ss_dssp CHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred CccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccC
Confidence 99988766 56556666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC------CCeeEEEEeCC--ceec
Q 026317 209 STFADVLVIFARNTTT------NQINGYANQSI--KFVL 239 (240)
Q Consensus 209 ~~~Ad~~~v~a~~~~~------~~~~~flVp~~--~~~~ 239 (240)
+..||+++|+|+++++ .++++|+||++ .++|
T Consensus 170 ~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v 208 (396)
T 1egd_A 170 GGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQI 208 (396)
T ss_dssp TTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEE
T ss_pred CcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeee
Confidence 9999999999998643 46899999987 5554
No 15
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=279.39 Aligned_cols=187 Identities=29% Similarity=0.420 Sum_probs=172.0
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHc
Q 026317 49 YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIAR 127 (240)
Q Consensus 49 ~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~ 127 (240)
+.|++.++++++++++.+|+|+++.+.|...+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|++++
T Consensus 23 ~~~~~~~~~e~~~l~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 102 (404)
T 2jif_A 23 MAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAK 102 (404)
T ss_dssp -CCTTCCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 4466779999999999999999999999888888889999999999999999999 999999999999999999999999
Q ss_pred cCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeec
Q 026317 128 VDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207 (240)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs 207 (240)
+|+++++.+.+|..++..+|..+|+++||++|||++++|. ++|+++|||++|||+..++|+|++++|||+|||+|.|||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is 181 (404)
T 2jif_A 103 VDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWIS 181 (404)
T ss_dssp TCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeec
Confidence 9999888777776566778889999999999999999986 789999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCC---CCeeEEEEeCCc
Q 026317 208 NSTFADVLVIFARNTTT---NQINGYANQSIK 236 (240)
Q Consensus 208 ~~~~Ad~~~v~a~~~~~---~~~~~flVp~~~ 236 (240)
|+..||+++|+|+++++ .++++|+||++.
T Consensus 182 ~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~ 213 (404)
T 2jif_A 182 SAEHAGLFLVMANVDPTIGYKGITSFLVDRDT 213 (404)
T ss_dssp TTTTCSEEEEEEESCGGGGGGGEEEEEEETTC
T ss_pred CCcccCEEEEEEEeCCCCCCCceEEEEEecCC
Confidence 99999999999998532 368999999875
No 16
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.5e-38 Score=281.11 Aligned_cols=190 Identities=22% Similarity=0.289 Sum_probs=174.4
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 50 ~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
.+++.++++++++++.+|+|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 103 (403)
T 3r7k_A 24 APEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAA 103 (403)
T ss_dssp -CGGGGCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhc
Confidence 355668999999999999999999999998899999999999999999999999 9999999999999999999999998
Q ss_pred -CCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeec
Q 026317 129 -DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207 (240)
Q Consensus 129 -~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs 207 (240)
|+++++.+.+++.++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|||
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs 183 (403)
T 3r7k_A 104 GGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFIT 183 (403)
T ss_dssp TCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEE
T ss_pred CCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEccc
Confidence 8887766665555677789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCC--CCeeEEEEeCCc--eec
Q 026317 208 NSTFADVLVIFARNTTT--NQINGYANQSIK--FVL 239 (240)
Q Consensus 208 ~~~~Ad~~~v~a~~~~~--~~~~~flVp~~~--~~~ 239 (240)
|+..||+++|.|+++++ +++++|+||+++ ++|
T Consensus 184 ~a~~Ad~~~v~a~~~~~~~~g~~~flV~~~~pGv~v 219 (403)
T 3r7k_A 184 SGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 219 (403)
T ss_dssp TTTTCSEEEEEEECSSSSGGGEEEEEEETTCTTEEE
T ss_pred CCccCCEEEEEEEcCCCCCCceEEEEEeCCCCCeEe
Confidence 99999999999998642 468999999987 654
No 17
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-38 Score=276.92 Aligned_cols=184 Identities=33% Similarity=0.507 Sum_probs=171.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcc
Q 026317 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASC 132 (240)
Q Consensus 54 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~ 132 (240)
.++++++++++.+++|+.+.+.|.+.+.|+.+.+|.++|++|.+.||+++ +|++|||.|+++.+++.++|+++++|+++
T Consensus 2 ~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~ 81 (372)
T 2dvl_A 2 TLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSV 81 (372)
T ss_dssp -CCHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHH
Confidence 47899999999999999998988888888889999999999999999999 99999999999999999999999999998
Q ss_pred hHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCCCC
Q 026317 133 STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212 (240)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~A 212 (240)
++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||+..|
T Consensus 82 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 161 (372)
T 2dvl_A 82 AVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHA 161 (372)
T ss_dssp HHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred HHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcC
Confidence 88777775467778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEeCCCCCeeEEEEeCCc--eec
Q 026317 213 DVLVIFARNTTTNQINGYANQSIK--FVL 239 (240)
Q Consensus 213 d~~~v~a~~~~~~~~~~flVp~~~--~~~ 239 (240)
|+++|+|++++ ++++|+||++. ++|
T Consensus 162 d~~~v~a~~~~--g~~~flV~~~~pGv~v 188 (372)
T 2dvl_A 162 HLYVVMARTEK--GISAFLVEKGTPGLSF 188 (372)
T ss_dssp SEEEEEEEETT--EEEEEEEETTCTTEEE
T ss_pred CEEEEEEEeCC--CcEEEEEeCCCCCeEe
Confidence 99999999864 79999999876 554
No 18
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.4e-38 Score=275.47 Aligned_cols=187 Identities=27% Similarity=0.352 Sum_probs=170.5
Q ss_pred CC-CCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 51 FD-DLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 51 m~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
|+ +.++++++++++.+++|+.+.+.|.+.+.|+.+.+|.++|++|.+.||+++ +|++|||.|+++.+++.++|+++++
T Consensus 5 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~ 84 (385)
T 2pg0_A 5 MTARYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKV 84 (385)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhh
Confidence 55 678999999999999999999999988888899999999999999999999 9999999999999999999999999
Q ss_pred C-CcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeec
Q 026317 129 D-ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207 (240)
Q Consensus 129 ~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs 207 (240)
| +++++.+ |..++...|..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|||
T Consensus 85 ~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 162 (385)
T 2pg0_A 85 GSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFIT 162 (385)
T ss_dssp CGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEET
T ss_pred CCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEeccc
Confidence 9 7877654 544567788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCC-----CCeeEEEEeCC--ceec
Q 026317 208 NSTFADVLVIFARNTTT-----NQINGYANQSI--KFVL 239 (240)
Q Consensus 208 ~~~~Ad~~~v~a~~~~~-----~~~~~flVp~~--~~~~ 239 (240)
|+.+||+++|.|+++++ .++++|+||++ .++|
T Consensus 163 ~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v 201 (385)
T 2pg0_A 163 NGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTR 201 (385)
T ss_dssp TTTTCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEE
T ss_pred CCcccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEe
Confidence 99999999999998633 26899999987 4544
No 19
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.7e-38 Score=277.17 Aligned_cols=184 Identities=29% Similarity=0.429 Sum_probs=171.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCH--HHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccC
Q 026317 53 DLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVD 129 (240)
Q Consensus 53 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~ 129 (240)
+.++++++++++.+++|+++.+.|.+.+.|+.+.+|. ++|++|++.||+++ +|++|||.|+++.+.+.++|+++++|
T Consensus 11 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~ 90 (394)
T 1ivh_A 11 NGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRAS 90 (394)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhc
Confidence 5689999999999999999999998888888999999 99999999999999 99999999999999999999999999
Q ss_pred CcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCC
Q 026317 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (240)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~ 209 (240)
+++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.||||+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~ 170 (394)
T 1ivh_A 91 GAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNG 170 (394)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETG
T ss_pred hhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCC
Confidence 99888877775467778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEEeCCC-----CCeeEEEEeCCc
Q 026317 210 TFADVLVIFARNTTT-----NQINGYANQSIK 236 (240)
Q Consensus 210 ~~Ad~~~v~a~~~~~-----~~~~~flVp~~~ 236 (240)
..||+++|+|+++++ .++++|+||++.
T Consensus 171 ~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~ 202 (394)
T 1ivh_A 171 PDADVLIVYAKTDLAAVPASRGITAFIVEKGM 202 (394)
T ss_dssp GGCSEEEEEEESCTTCSSGGGGEEEEEEETTC
T ss_pred CcCCEEEEEEEeCCcccCCCCCeEEEEEeCCC
Confidence 999999999998643 368999999875
No 20
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=1.2e-37 Score=274.30 Aligned_cols=191 Identities=35% Similarity=0.550 Sum_probs=174.5
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHH
Q 026317 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEI 125 (240)
Q Consensus 47 ~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~l 125 (240)
+.+.|++.++++++++++.+++|+++.+.|...+.++.+.+|.++|++|++.||+++ + ++|||.|+++.+++.++|++
T Consensus 6 ~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel 84 (392)
T 1siq_A 6 DPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLAREL 84 (392)
T ss_dssp STTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHH
Confidence 556688899999999999999999999988888888888999999999999999999 9 99999999999999999999
Q ss_pred HccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEe--CCEEEEeeeE
Q 026317 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQK 203 (240)
Q Consensus 126 a~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~--~~g~~LnG~K 203 (240)
+++|+++++.+.+|..++...+..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|+++ +|||+|||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K 164 (392)
T 1siq_A 85 ERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTK 164 (392)
T ss_dssp HTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEE
T ss_pred HHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEE
Confidence 99999887766666545566788899999999999999999999999999999999999999999999 9999999999
Q ss_pred eeecCCCCCCEEEEEEEeCCCCCeeEEEEeCCc--eec
Q 026317 204 RWIGNSTFADVLVIFARNTTTNQINGYANQSIK--FVL 239 (240)
Q Consensus 204 ~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~~--~~~ 239 (240)
.||||+..||+++|.|++++ +++++|+||++. ++|
T Consensus 165 ~~vs~~~~Ad~~~v~a~~~~-g~~~~flV~~~~pGv~v 201 (392)
T 1siq_A 165 TWITNSPMADLFVVWARCED-GCIRGFLLEKGMRGLSA 201 (392)
T ss_dssp EEEETGGGCSEEEEEEEETT-SCEEEEEEETTCTTEEC
T ss_pred EeecCCcccCEEEEEEEECC-CCEEEEEEeCCCCCeEe
Confidence 99999999999999999863 458999999976 543
No 21
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=9.1e-38 Score=275.51 Aligned_cols=185 Identities=30% Similarity=0.465 Sum_probs=172.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCC-HHHHHHHHhcCcCCC-ccccCCCCCC--CHHHHHHHHHHHH
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP-FHVIPKLGALRVAGG-TIKGYGCPGH--SVTGAAIAIAEIA 126 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~l-~p~~~GG~g~--~~~~~~~v~e~la 126 (240)
|+|.++++++++++.+|+|+.+.+.|.+.+.|+.+.+| .++|++|++.||+++ +|++|||.|+ ++.+++.++|+++
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela 80 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIA 80 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999 999999999999999 9999999999 9999999999999
Q ss_pred ccCCcchHHHHhhhhHHHH-HHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEee
Q 026317 127 RVDASCSTFILVHSSLAML-TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (240)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~ 205 (240)
++|+++++.+.+| .++.. .+..+|+++||++|+|++++|+.++|+++|||++|||+..++|+|++++|||+|||+|.|
T Consensus 81 ~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~ 159 (397)
T 3mpi_A 81 RGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTW 159 (397)
T ss_dssp HHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEE
T ss_pred hhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEe
Confidence 9999998877777 34555 889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCEEEEEEEeCCC---CCeeEEEE-eCCc
Q 026317 206 IGNSTFADVLVIFARNTTT---NQINGYAN-QSIK 236 (240)
Q Consensus 206 vs~~~~Ad~~~v~a~~~~~---~~~~~flV-p~~~ 236 (240)
+||+..||+++|.|+++++ .++++|+| |++.
T Consensus 160 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~ 194 (397)
T 3mpi_A 160 ISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNF 194 (397)
T ss_dssp EETTTTCSSEEEEEESCGGGGGGSEEEEEECTTTS
T ss_pred eCCCcccCEEEEEEEcCCCCCCCceEEEEEEcCCC
Confidence 9999999999999998542 46899999 8873
No 22
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.9e-37 Score=275.01 Aligned_cols=190 Identities=18% Similarity=0.147 Sum_probs=163.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhC------------------CCCHHHHHHHHhcCcCCC-ccccCCC
Q 026317 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA------------------EFPFHVIPKLGALRVAGG-TIKGYGC 110 (240)
Q Consensus 50 ~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~------------------~~~~~~~~~l~~~Gl~~l-~p~~~GG 110 (240)
.|++.++++++++++.+|+|+++.+.|.+.+.++.. .+|+++|++|++.||+++ +|++|||
T Consensus 4 ~M~~~~~~~~~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~GG 83 (415)
T 4hr3_A 4 SMDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELG 83 (415)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHHCC
Confidence 388899999999999999999999888877665543 267899999999999999 9999999
Q ss_pred CCCCHHHHHHHHHHHHccCCcchHHHHh-hhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCC-CCCCcCCCce
Q 026317 111 PGHSVTGAAIAIAEIARVDASCSTFILV-HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASALNT 188 (240)
Q Consensus 111 ~g~~~~~~~~v~e~la~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~-~Gsd~~~~~t 188 (240)
.|+++.+++.++|+++++|.+..++... +...+...|..+|+++||++|||++++|+.++|+++|||+ +|||+..++|
T Consensus 84 ~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t 163 (415)
T 4hr3_A 84 GGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAA 163 (415)
T ss_dssp CCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCC
T ss_pred CCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCee
Confidence 9999999999999999987653332211 1122346788999999999999999999999999999999 9999999999
Q ss_pred EEEEeCCEEEEeeeEeeecCCCC--CCEEEEEEEeCCC----CCeeEEEEeCCc--eec
Q 026317 189 TATKVEGGWILEGQKRWIGNSTF--ADVLVIFARNTTT----NQINGYANQSIK--FVL 239 (240)
Q Consensus 189 ~a~~~~~g~~LnG~K~~vs~~~~--Ad~~~v~a~~~~~----~~~~~flVp~~~--~~~ 239 (240)
+|++++|||+|||+|.||||+.+ ||+++|+|+++++ +++++|+||+++ ++|
T Consensus 164 ~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v 222 (415)
T 4hr3_A 164 TAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITV 222 (415)
T ss_dssp EEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEE
T ss_pred EEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEe
Confidence 99999999999999999999966 9999999998643 479999999976 554
No 23
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=6.8e-37 Score=281.51 Aligned_cols=197 Identities=26% Similarity=0.375 Sum_probs=172.1
Q ss_pred ccccccCCCcccccccCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHh-CCCCHHHHHH
Q 026317 16 ARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK-AEFPFHVIPK 94 (240)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~ 94 (240)
++.+|+++ .++.+.++|. ++++++++++.+++|+++.+.|...+.+.. ..+|.++|++
T Consensus 10 ~~~~f~~~-~~~~~~~~~~--------------------~~~e~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~ 68 (577)
T 2z1q_A 10 KGGGWLLE-VPERVYTPED--------------------FDESVKEIARTTRTFVEREVLPLLERMEHGELELNVPLMRK 68 (577)
T ss_dssp STTGGGTS-CCSCCCCGGG--------------------CCHHHHHHHHHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHH
T ss_pred ccCccccC-CHHHcCCCCC--------------------CCHHHHHHHHHHHHHHhccCchhHHhhhcccCCCCHHHHHH
Confidence 46788888 6665544221 578899999999999999888875444322 3789999999
Q ss_pred HHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEE
Q 026317 95 LGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173 (240)
Q Consensus 95 l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a 173 (240)
|++.||+++ +|++|||.|+++.+.+.++|++ +.|+++++++.+|.+++..+|..+|+++||++|||++++|+.++|++
T Consensus 69 l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~a 147 (577)
T 2z1q_A 69 AGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYC 147 (577)
T ss_dssp HHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 999999999 9999999999999999999999 77888888887776666667889999999999999999999999999
Q ss_pred eeCCCCCCCcCCCceEEEEe--CCEEEEeeeEeeecCCCCCCEEEEEEEeCCCCCeeEEEEeCC
Q 026317 174 LTEPAYGSDASALNTTATKV--EGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYANQSI 235 (240)
Q Consensus 174 ~tEp~~Gsd~~~~~t~a~~~--~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~~~~~~~flVp~~ 235 (240)
+|||++|||+..++|+|+++ +++|+|||+|+||||+..||+++|+|++++ +++++|+||++
T Consensus 148 lTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g-~gis~flVp~~ 210 (577)
T 2z1q_A 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG-EHFTAFLVERD 210 (577)
T ss_dssp CCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT-TEEEEEEEETT
T ss_pred ecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC-CeeEEEEEeCC
Confidence 99999999999999999984 557999999999999999999999999864 67999999987
No 24
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2e-36 Score=264.39 Aligned_cols=173 Identities=18% Similarity=0.208 Sum_probs=158.2
Q ss_pred HHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHhhhhH
Q 026317 64 MKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142 (240)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~~~~~ 142 (240)
+.+|+|+++.+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++|+++++.+.+|..+
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~ 81 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMA 81 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 4578899999999888888899999999999999999999 999999999999999999999999999988877777546
Q ss_pred HHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCCCCCEEEEEEEeC
Q 026317 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222 (240)
Q Consensus 143 ~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~ 222 (240)
+...|. +|+++||++|||++++|+ +.|+++|||++|||+..++|+|++++|||+|||+|.||||+..||+++|+|+++
T Consensus 82 ~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~ 159 (366)
T 1r2j_A 82 AWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQE 159 (366)
T ss_dssp HHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCS
T ss_pred HHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeC
Confidence 667788 999999999999999999 999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCeeEEEEeCCc--eec
Q 026317 223 TTNQINGYANQSIK--FVL 239 (240)
Q Consensus 223 ~~~~~~~flVp~~~--~~~ 239 (240)
+ +++++|+||+++ ++|
T Consensus 160 ~-~g~~~flV~~~~~Gv~~ 177 (366)
T 1r2j_A 160 D-GSGAVVVVPADTPGVRV 177 (366)
T ss_dssp S-SCCEEEEEETTSTTEEE
T ss_pred C-CceEEEEEECCCCCeEe
Confidence 4 378999999986 554
No 25
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=5.8e-36 Score=276.34 Aligned_cols=203 Identities=26% Similarity=0.338 Sum_probs=174.9
Q ss_pred ccccccCCCcccccccCCCCCCCCCCCCCCCCcccCCCCCCHHHH----HHHHHHHHHHHhhccccHHHHHHhCCCCHHH
Q 026317 16 ARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ----AVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91 (240)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~~~~----~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 91 (240)
++++|.|+|.++.+.++|.. +++++. ++++.+++|+.+.+.+ .+.|+...+|.++
T Consensus 26 ~~~lf~g~~~~~~~~~~p~~-------------------l~~~~~~~~~~l~~~~~~~~~~~~~~--~~~d~~~~~p~~~ 84 (607)
T 2uxw_A 26 AVGMFKGQLTTDQVFPYPSV-------------------LNEEQTQFLKELVEPVSRFFEEVNDP--AKNDALEMVEETT 84 (607)
T ss_dssp HHHHTTTCCCCTTTSSCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHTCCH--HHHHHHTSCCHHH
T ss_pred HHHhcCCCCCHHHhCCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHhhcCH--HHhccccCCCHHH
Confidence 56788898888888775421 345553 4889999999988755 3456778999999
Q ss_pred HHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceE
Q 026317 92 IPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170 (240)
Q Consensus 92 ~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~ 170 (240)
|++|++.||+++ +|++|||.|++..+.+.+.|+++++|+++++++.+|.+++..+|..+|+++||++|||++++|++++
T Consensus 85 ~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~ 164 (607)
T 2uxw_A 85 WQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVA 164 (607)
T ss_dssp HHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCE
T ss_pred HHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEE
Confidence 999999999999 9999999999999999999999999999888877775555678889999999999999999999999
Q ss_pred EEEeeCCCCCCCcCCCceEEEEeC--CEEEEeeeEeeecCCCCCCEEEEEEEeCC--------CCCeeEEEEeCC--cee
Q 026317 171 CWALTEPAYGSDASALNTTATKVE--GGWILEGQKRWIGNSTFADVLVIFARNTT--------TNQINGYANQSI--KFV 238 (240)
Q Consensus 171 ~~a~tEp~~Gsd~~~~~t~a~~~~--~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~--------~~~~~~flVp~~--~~~ 238 (240)
|+++|||++|||+..++|+|++++ ++|+|||+|+||||+..||+++|+|++++ .+++++|+||++ .++
T Consensus 165 ~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~ 244 (607)
T 2uxw_A 165 AFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGIT 244 (607)
T ss_dssp EEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEE
T ss_pred EEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeE
Confidence 999999999999999999999973 47999999999999999999999999842 246899999986 444
Q ss_pred c
Q 026317 239 L 239 (240)
Q Consensus 239 ~ 239 (240)
|
T Consensus 245 v 245 (607)
T 2uxw_A 245 H 245 (607)
T ss_dssp E
T ss_pred E
Confidence 3
No 26
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=4.4e-36 Score=276.53 Aligned_cols=181 Identities=29% Similarity=0.456 Sum_probs=162.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhccccHHHHHHhC-CCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCc
Q 026317 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDAS 131 (240)
Q Consensus 54 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~ 131 (240)
.++++++++++.+|+|+.+.+.|...+.++.+ .+|.++|++|++.||+++ +|++|||.|+++.+++.++|++++++.
T Consensus 32 ~lt~eq~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~~- 110 (597)
T 3owa_A 32 DFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGG- 110 (597)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGTH-
T ss_pred CCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccch-
Confidence 37899999999999999999999888777655 688999999999999999 999999999999999999999999864
Q ss_pred chHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEe--CCEEEEeeeEeeecCC
Q 026317 132 CSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKRWIGNS 209 (240)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~--~~g~~LnG~K~~vs~~ 209 (240)
.+..+..|.+++...+..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ +++|+|||+|.||||+
T Consensus 111 ~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a 190 (597)
T 3owa_A 111 FAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNS 190 (597)
T ss_dssp HHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCC
Confidence 34445556555666788899999999999999999999999999999999999999999985 4569999999999999
Q ss_pred CCCCEEEEEEEeCCCCCeeEEEEeCCc
Q 026317 210 TFADVLVIFARNTTTNQINGYANQSIK 236 (240)
Q Consensus 210 ~~Ad~~~v~a~~~~~~~~~~flVp~~~ 236 (240)
.+||+++|+|++++ +++++|+||++.
T Consensus 191 ~~Ad~~lV~Art~~-~g~s~flV~~~~ 216 (597)
T 3owa_A 191 AFADVFIVYAKIDG-EHFSAFIVEKDY 216 (597)
T ss_dssp TTCSEEEEEEEETT-TEEEEEEEETTS
T ss_pred ccCCEEEEEEEeCC-CceEEEEEeCCC
Confidence 99999999999863 579999999875
No 27
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=2.4e-35 Score=263.20 Aligned_cols=185 Identities=22% Similarity=0.295 Sum_probs=164.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHh----CCCC--HHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHH
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK----AEFP--FHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIA 123 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~--~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e 123 (240)
|++.+++++.++++.+|+|+++.+.|...+.++. +.+| .++|++|++.||+++ +|++|||.|+++.+++.++|
T Consensus 2 M~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 81 (439)
T 2c12_A 2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILE 81 (439)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 7788999999999999999999998887665542 3455 899999999999999 99999999999999999999
Q ss_pred HHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhh--cCCceEEEEeeCCCCCC-----CcCCCceEEEEeCCE
Q 026317 124 EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA--QLNTIACWALTEPAYGS-----DASALNTTATKVEGG 196 (240)
Q Consensus 124 ~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~--~G~~~~~~a~tEp~~Gs-----d~~~~~t~a~~~~~g 196 (240)
++++.|+++++.+.+| .++...+..+|+++||++|||+++ +|+.++|+++|||++|| |+..++|+|++++||
T Consensus 82 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g 160 (439)
T 2c12_A 82 ELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNE 160 (439)
T ss_dssp HHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTE
T ss_pred HHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCE
Confidence 9999999998877666 356667889999999999999999 69999999999999997 588889999999999
Q ss_pred EEEeeeEeeecCCC-----CCCEEEEEEEe-C----CC-------CCeeEEEEeCCc
Q 026317 197 WILEGQKRWIGNST-----FADVLVIFARN-T----TT-------NQINGYANQSIK 236 (240)
Q Consensus 197 ~~LnG~K~~vs~~~-----~Ad~~~v~a~~-~----~~-------~~~~~flVp~~~ 236 (240)
|+|||+|.||||+. .||+++|+|++ + ++ .++++|+||+++
T Consensus 161 ~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~ 217 (439)
T 2c12_A 161 WVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRET 217 (439)
T ss_dssp EEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHH
T ss_pred EEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCC
Confidence 99999999999997 89999999998 5 21 368999999764
No 28
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=5.5e-36 Score=267.27 Aligned_cols=186 Identities=19% Similarity=0.294 Sum_probs=162.4
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhhccccHHHHHH----hC-CCC--HHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHH
Q 026317 49 YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWE----KA-EFP--FHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAI 120 (240)
Q Consensus 49 ~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~----~~-~~~--~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~ 120 (240)
|.|+|.++++++++++.+|+|+++.+.|...+.++ .. .+| +++|++|++.||+++ +|++|||.|+++.+++.
T Consensus 1 m~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~ 80 (438)
T 3mkh_A 1 MAIDFHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAI 80 (438)
T ss_dssp -CCBCCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHH
Confidence 34889999999999999999999999888766543 22 454 899999999999999 99999999999999999
Q ss_pred HHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcC--CceEEEEeeCCCCCC-----CcCCCceEEEEe
Q 026317 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL--NTIACWALTEPAYGS-----DASALNTTATKV 193 (240)
Q Consensus 121 v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G--~~~~~~a~tEp~~Gs-----d~~~~~t~a~~~ 193 (240)
++|++++.|+++++.+..+ .++...+..+|+++ |++||+++++| +.++|+++|||++|| |+..++|+|+++
T Consensus 81 v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~ 158 (438)
T 3mkh_A 81 LVEECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE 158 (438)
T ss_dssp HHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE
T ss_pred HHHHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe
Confidence 9999999999888766554 45566778899999 99999999997 589999999999998 689999999999
Q ss_pred CCEEEEeeeEeeecCCC-----CCCEEEEEEEeCC---------CCCeeEEEEeCCc
Q 026317 194 EGGWILEGQKRWIGNST-----FADVLVIFARNTT---------TNQINGYANQSIK 236 (240)
Q Consensus 194 ~~g~~LnG~K~~vs~~~-----~Ad~~~v~a~~~~---------~~~~~~flVp~~~ 236 (240)
+|||+|||+|.||||+. .||+++|+|+++. .+++++|+||+++
T Consensus 159 g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~ 215 (438)
T 3mkh_A 159 GDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRAD 215 (438)
T ss_dssp TTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHH
T ss_pred CCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCc
Confidence 99999999999999997 8999999999842 1368999999753
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-34 Score=252.87 Aligned_cols=190 Identities=21% Similarity=0.239 Sum_probs=153.2
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHhhccccHH---HHHHh-----CC-----CCHHHHHHHHhcCcCCC-ccccCCCCC
Q 026317 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMA---EYWEK-----AE-----FPFHVIPKLGALRVAGG-TIKGYGCPG 112 (240)
Q Consensus 47 ~~~~m~~~l~~~~~~l~~~~~~~~~~~~~~~~~---~~d~~-----~~-----~~~~~~~~l~~~Gl~~l-~p~~~GG~g 112 (240)
+...|++.++++++++++.+|+|+++++.|... +.++. .. ++.++|++|++.||+++ +|+ |.|
T Consensus 15 ~~~~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~---G~g 91 (428)
T 2wbi_A 15 DTTGQLFVQTRKGQEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA---VSG 91 (428)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH---HHC
T ss_pred CCccCCCCCCHHHHHHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC---CCC
Confidence 344588889999999999999999998877665 44432 23 34789999999999999 898 789
Q ss_pred CCHHHHHHHHHHHHccCCcc-hHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCC-CCCCcCCCceEE
Q 026317 113 HSVTGAAIAIAEIARVDASC-STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASALNTTA 190 (240)
Q Consensus 113 ~~~~~~~~v~e~la~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~-~Gsd~~~~~t~a 190 (240)
+++.+++.++|+++++|.+. ++....+..++...|..+|+++||++|||++++|+.++|+++|||+ +|||+..++|+|
T Consensus 92 ~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A 171 (428)
T 2wbi_A 92 LSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSI 171 (428)
T ss_dssp CCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEE
T ss_pred CCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEE
Confidence 99999999999999998532 2211122224566788899999999999999999999999999999 999999999999
Q ss_pred EEeCCEEEEeeeEeeecCCCC--CCEEEEEEEeCCC-----CCeeEEEEeCC--ceec
Q 026317 191 TKVEGGWILEGQKRWIGNSTF--ADVLVIFARNTTT-----NQINGYANQSI--KFVL 239 (240)
Q Consensus 191 ~~~~~g~~LnG~K~~vs~~~~--Ad~~~v~a~~~~~-----~~~~~flVp~~--~~~~ 239 (240)
++++|||+|||+|.||||+.+ ||+++|+|+++++ +++++|+||++ .++|
T Consensus 172 ~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v 229 (428)
T 2wbi_A 172 QRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKI 229 (428)
T ss_dssp EEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEE
T ss_pred EEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEe
Confidence 999999999999999999988 9999999998643 26899999987 4544
No 30
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=2.1e-33 Score=250.71 Aligned_cols=183 Identities=19% Similarity=0.274 Sum_probs=158.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCC-CCHHHHHHHHHHHHcc
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPG-HSVTGAAIAIAEIARV 128 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g-~~~~~~~~v~e~la~~ 128 (240)
|++.++++++++++.+++|+. .+.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.| .++.+++.++|+++++
T Consensus 16 m~~~lt~e~~~l~~~~r~~~~-~~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~ 94 (439)
T 3m9v_A 16 LYAPVTPAGRVLLDRLAAHLP-RIRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARA 94 (439)
T ss_dssp TSSCSSHHHHHHHHHHHTTHH-HHHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHH-HHhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhh
Confidence 889999999999999999997 4788888889999999999999999999999 999999999 8999999999999999
Q ss_pred CCcchHHHHhhhhHHHHH--HhccCCHHH---HHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeE
Q 026317 129 DASCSTFILVHSSLAMLT--IALCGSEEQ---KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K 203 (240)
|+++++.+.+|......+ +..+|+++| |++||+++++|+.++|+++|||++ |...+.| +++|||+|||+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~--~~~~~~t---~~~~g~vlnG~K 169 (439)
T 3m9v_A 95 DASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHT--AVTTLRP---DGAGGWLLSGRK 169 (439)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTT--CCCEEEE---CSSSCEEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCC--CCCceee---ccCCEEEEEeEE
Confidence 999888777665444333 346799999 999999999999999999999975 3333322 278889999999
Q ss_pred eeecCCCCCCEEEEEEEeCCC---CCeeEEEEeCCc--eec
Q 026317 204 RWIGNSTFADVLVIFARNTTT---NQINGYANQSIK--FVL 239 (240)
Q Consensus 204 ~~vs~~~~Ad~~~v~a~~~~~---~~~~~flVp~~~--~~~ 239 (240)
+||||+.+|||++|.|+++++ .++++|+||+++ ++|
T Consensus 170 ~~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i 210 (439)
T 3m9v_A 170 TLVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTV 210 (439)
T ss_dssp EEETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEE
T ss_pred EeecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEE
Confidence 999999999999999998643 468999999986 665
No 31
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=1.9e-33 Score=247.54 Aligned_cols=183 Identities=19% Similarity=0.250 Sum_probs=157.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCC-CCHHHHHHHHHHHHcc
Q 026317 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPG-HSVTGAAIAIAEIARV 128 (240)
Q Consensus 51 m~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g-~~~~~~~~v~e~la~~ 128 (240)
|...++++++++++.+|+|+.+ +.|.+.+.|+++.+|.++|++|++.||+++ +|++|||.| .++.+++.++|+++++
T Consensus 5 ~~~~lt~e~~~~~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~ 83 (395)
T 3mxl_A 5 LRAPLTPAGRTVVDLLAGVIPR-ISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEA 83 (395)
T ss_dssp SSSCCSHHHHHHHHHHTTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTT
T ss_pred cccCCCHHHHHHHHHHHHHHHH-HhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhh
Confidence 5567899999999999999974 788888999999999999999999999999 999999999 9999999999999999
Q ss_pred CCcchHHHHhhhhHHHHHH--hccCCHHHH---HhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeE
Q 026317 129 DASCSTFILVHSSLAMLTI--ALCGSEEQK---QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K 203 (240)
|+++++.+.+|..++...+ ..+|+++|| ++|||++++|+.++|+++|||++|+ ..++| +++|||+|||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t---~~~~g~~lnG~K 158 (395)
T 3mxl_A 84 DASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHS---DGAGGWLLSGRK 158 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEE---CSSSCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEE---ecCCEEEEeeEE
Confidence 9998887777754444433 357999999 9999999999999999999998653 22222 278889999999
Q ss_pred eeecCCCCCCEEEEEEEeCCC---CCeeEEEEeCCc--eec
Q 026317 204 RWIGNSTFADVLVIFARNTTT---NQINGYANQSIK--FVL 239 (240)
Q Consensus 204 ~~vs~~~~Ad~~~v~a~~~~~---~~~~~flVp~~~--~~~ 239 (240)
.||||+..||+++|+|+++++ .++++|+||+++ ++|
T Consensus 159 ~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v 199 (395)
T 3mxl_A 159 VLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTV 199 (395)
T ss_dssp EEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEE
T ss_pred EEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEe
Confidence 999999999999999998543 258899999986 554
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.98 E-value=5.1e-32 Score=239.99 Aligned_cols=173 Identities=13% Similarity=0.071 Sum_probs=148.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCC
Q 026317 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDA 130 (240)
Q Consensus 52 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~ 130 (240)
++.++++++++++.+++|+.+ +.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++|+
T Consensus 15 ~~~~~~~~~~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~ 93 (414)
T 2or0_A 15 ENLYFQGMGRVLDRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDG 93 (414)
T ss_dssp --------CHHHHHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCH
T ss_pred cCCCCccHHHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 455788999999999999986 888888888899999999999999999999 999999999999999999999999999
Q ss_pred cchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCC
Q 026317 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210 (240)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~ 210 (240)
++++++.++ .++...|..+|+++||++|+| +|+.++|+++| | +|+|++++|||+|||+|.||||+.
T Consensus 94 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~ 159 (414)
T 2or0_A 94 ASGWVTGIV-GVHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTD 159 (414)
T ss_dssp HHHHHHHHH-TTHHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGG
T ss_pred HHHHHHHHH-HHHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCc
Confidence 988877666 366778889999999999999 69989999887 4 589999999999999999999999
Q ss_pred CCCEEEEEEEeCC---CC---CeeEEEEeCCceec
Q 026317 211 FADVLVIFARNTT---TN---QINGYANQSIKFVL 239 (240)
Q Consensus 211 ~Ad~~~v~a~~~~---~~---~~~~flVp~~~~~~ 239 (240)
.||+++|+|++++ .. ++++|+||++.++|
T Consensus 160 ~Ad~~~v~a~~~~~~g~~~~~g~~~flV~~~gv~v 194 (414)
T 2or0_A 160 HCQWAFLGAMVGDGEGGIATPSSLHVILPRTDYQI 194 (414)
T ss_dssp GCSEEEEEEEECC-----CCCSEEEEEEEGGGCEE
T ss_pred hhhEEEEEEEecCCCCCcccceeEEEEEEhhhcEE
Confidence 9999999999852 22 78999999987665
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.97 E-value=1.6e-30 Score=230.95 Aligned_cols=165 Identities=18% Similarity=0.162 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHh
Q 026317 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILV 138 (240)
Q Consensus 60 ~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~ 138 (240)
.++++.+++|+. .+.|.+.+.|+.+.+|.++|++|.+.||+++ +|++|||.|+++.+++.++|+++++|+++++.+..
T Consensus 38 ~~l~~~~r~~~~-~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~ 116 (422)
T 2jbr_A 38 VSMLEKIQQILP-QIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSL 116 (422)
T ss_dssp CCHHHHHHHHHH-HHHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHH
Confidence 358899999987 5788888888899999999999999999999 99999999999999999999999999998876665
Q ss_pred hhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCCCCCEEEEE
Q 026317 139 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218 (240)
Q Consensus 139 ~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~ 218 (240)
+ .++...+..+|+++||++|+++ |+.+.|+++| | +|+|++++|||+|||+|.||||+.+||+++|+
T Consensus 117 ~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ 182 (422)
T 2jbr_A 117 L-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVG 182 (422)
T ss_dssp H-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEE
T ss_pred H-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEE
Confidence 5 4667788899999999999996 8889999987 4 47999999999999999999999999999999
Q ss_pred EEeCC-C--CCeeEEEEeCCceec
Q 026317 219 ARNTT-T--NQINGYANQSIKFVL 239 (240)
Q Consensus 219 a~~~~-~--~~~~~flVp~~~~~~ 239 (240)
|++++ + .++++|+||++.++|
T Consensus 183 a~~~~~~g~~g~~~flV~~~gv~v 206 (422)
T 2jbr_A 183 FNRFDADGNKIYSFGVIPRSDYEI 206 (422)
T ss_dssp EEEECTTSCEEEEEEEEEGGGCEE
T ss_pred EEecCCCCCceeEEEEEEcCceEE
Confidence 99853 2 268999999987765
No 34
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.97 E-value=2.9e-30 Score=227.24 Aligned_cols=165 Identities=12% Similarity=0.104 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCC-ccccCCCCCCCHHHHHHHHHHHHccCCcchHHHHh
Q 026317 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILV 138 (240)
Q Consensus 60 ~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l-~p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~ 138 (240)
.++++.+++|+.+ +.|.+.+.|+.+.+|.++|++|++.||+++ +|++|||.|+++.+++.++|+++++|+++++++.+
T Consensus 10 ~~l~~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~ 88 (394)
T 2rfq_A 10 HEVMQRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSI 88 (394)
T ss_dssp SHHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHH
Confidence 3689999999975 888888888899999999999999999999 99999999999999999999999999998887666
Q ss_pred hhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEeCCEEEEeeeEeeecCCCCCCEEEEE
Q 026317 139 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218 (240)
Q Consensus 139 ~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~ 218 (240)
| .++...+..+|+++||++|++ +|+.+.|+++| | +|+|++++|||+|||+|.||||+.+||+++|+
T Consensus 89 ~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ 154 (394)
T 2rfq_A 89 I-GVHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLG 154 (394)
T ss_dssp H-HHHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEE
T ss_pred H-HHHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEe
Confidence 6 366778889999999999999 68889999987 4 58999999999999999999999999999999
Q ss_pred EEeCCCC---CeeEEEEeCCceec
Q 026317 219 ARNTTTN---QINGYANQSIKFVL 239 (240)
Q Consensus 219 a~~~~~~---~~~~flVp~~~~~~ 239 (240)
|++++++ ++++|+||++.++|
T Consensus 155 a~~~~~g~~~~~~~flV~~~gv~v 178 (394)
T 2rfq_A 155 GPVIKDGRPVDFVSFLIPREDYRI 178 (394)
T ss_dssp EEEEETTEEEEEEEEEEEGGGCEE
T ss_pred eeecCCCCCCceeEEEEEhhhcEE
Confidence 9983222 68999999987765
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.93 E-value=1.5e-26 Score=215.43 Aligned_cols=174 Identities=21% Similarity=0.190 Sum_probs=140.6
Q ss_pred CCCCC-HHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcCcCCCccccCCCCCCCHHHHHHHHHHHHccCC
Q 026317 52 DDLLT-SEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDA 130 (240)
Q Consensus 52 ~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~p~~~GG~g~~~~~~~~v~e~la~~~~ 130 (240)
++.++ +++.++++.+++|+.+..... ...+....++++.|+.|++.|+++.+|++|| ++..+...+.++++ .
T Consensus 23 ~~~~~~~e~~~lr~~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~l~~~p~e~G---~~~~~~~~v~e~~~---~ 95 (659)
T 1w07_A 23 IVWAGSRHAFEVSDRIARLVASDPVFE-KSNRARLSRKELFKSTLRKCAHAFKRIIELR---LNEEEAGRLRHFID---Q 95 (659)
T ss_dssp HHHHSSHHHHHHHHHHHHHHHTCGGGC-CTTTTSSCHHHHHHHHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHC---C
T ss_pred HHHCCChHHHHHHHHHHHHHhcCcccc-cCCccCCChHHHHHHHHHHHHHHHHhHHHhC---CCchHHHHHHHHhc---c
Confidence 34445 889999999999998763321 1111123567889999999988877888887 35677777766663 3
Q ss_pred cchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEe--CCEEEEe-----eeE
Q 026317 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILE-----GQK 203 (240)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~--~~g~~Ln-----G~K 203 (240)
+++ +.+|..++...|..+|+++||++|||++++|+.++|+|+|||++|||+.+++|+|+++ +|||+|| |+|
T Consensus 96 ~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K 173 (659)
T 1w07_A 96 PAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASK 173 (659)
T ss_dssp CCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSE
T ss_pred chh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEE
Confidence 444 4566556777888999999999999999999999999999999999999999999998 6899999 999
Q ss_pred eeecC-CCCCCEEEEEEEeCCC---CCeeEEEEeC
Q 026317 204 RWIGN-STFADVLVIFARNTTT---NQINGYANQS 234 (240)
Q Consensus 204 ~~vs~-~~~Ad~~~v~a~~~~~---~~~~~flVp~ 234 (240)
+|||| +..|||++|+|+++.+ .|+++|+||.
T Consensus 174 ~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~ 208 (659)
T 1w07_A 174 WWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQL 208 (659)
T ss_dssp ECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEc
Confidence 99999 8999999999998532 3689999994
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.90 E-value=1.1e-24 Score=198.58 Aligned_cols=138 Identities=17% Similarity=0.137 Sum_probs=113.2
Q ss_pred HHHHHHHHhcCcCCC-c--cccCCCCCCCHHHHHHHHHHHHccCCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhc
Q 026317 89 FHVIPKLGALRVAGG-T--IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165 (240)
Q Consensus 89 ~~~~~~l~~~Gl~~l-~--p~~~GG~g~~~~~~~~v~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~ 165 (240)
+++++.+.+.||+++ + |++|||.+........ ++..+....+.+.++. .+...|..+| ++||++|+|++++
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~----~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~s 162 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFML----HAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLS 162 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHH----HHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHH----HHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhC
Confidence 678899999999999 8 6899965444333333 3333444444344443 3556677788 8999999999999
Q ss_pred CCc-------------eEEEEeeCCCCCCCcCCCceEEEEe-CCEEEEeeeEeeecCCCCCCEEEEEEEeCCCCCeeEEE
Q 026317 166 LNT-------------IACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYA 231 (240)
Q Consensus 166 G~~-------------~~~~a~tEp~~Gsd~~~~~t~a~~~-~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~~~~~~~fl 231 (240)
|+. +.|+++|||++|||+..++|+|+++ +|+|+|||+|+|+| +.+||+++|+|+++ +|+++|+
T Consensus 163 ge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~--~Gis~fl 239 (541)
T 3djl_A 163 DRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA--GGLSCFF 239 (541)
T ss_dssp SCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET--TEEEEEE
T ss_pred CCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC--CceEEEE
Confidence 998 7899999999999999999999999 78899999999999 89999999999985 6899999
Q ss_pred EeCC
Q 026317 232 NQSI 235 (240)
Q Consensus 232 Vp~~ 235 (240)
||++
T Consensus 240 Vp~~ 243 (541)
T 3djl_A 240 VPRF 243 (541)
T ss_dssp EESB
T ss_pred EecC
Confidence 9987
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.85 E-value=4e-21 Score=178.87 Aligned_cols=166 Identities=16% Similarity=0.226 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHHHHHHhhccccHHH-------HHHhCCCCHHHHHHHHhcCcCCCccccCCCCCCCHHHHHHHHHHHHcc
Q 026317 56 TSEEQAVRMKVRECMEKEIAPIMAE-------YWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARV 128 (240)
Q Consensus 56 ~~~~~~l~~~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~~~l~~~Gl~~l~p~~~GG~g~~~~~~~~v~e~la~~ 128 (240)
+++..++++++++|+.+. |.... .++......+..+.|.+. | ++|||.+ ..+... .+++...
T Consensus 26 ~~~~~~~r~~~~~~l~~~--p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~-~-----~~~~~~~--~~~~~~-~~~~~~~ 94 (661)
T 2ddh_A 26 SPENTRRRREIENLILND--PDFQHEDYNFLTRSQRYEVAVKKSATMVKK-M-----REYGISD--PEEIMW-FKNSVHR 94 (661)
T ss_dssp SHHHHHHHHHHHHHHHTC--GGGCCSCGGGSCHHHHHHHHHHHHHHHHHH-H-----HHTTCCC--HHHHHH-HHHHHHT
T ss_pred ChhHHHHHHHHHHHHhcC--cccccCCcCCCCHHHHHHHHHHHHHHHHHH-H-----HHcCCCC--chHHHH-HHHHhcc
Confidence 467788999999999865 21110 011111111222333332 2 5677765 333333 6666654
Q ss_pred CCcchHHHHhhhhHHHHHHhccCCHHHHHhhchhhhcCCceEEEEeeCCCCCCCcCCCceEEEEe--CCEEEEe-----e
Q 026317 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILE-----G 201 (240)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~G~~~~~~a~tEp~~Gsd~~~~~t~a~~~--~~g~~Ln-----G 201 (240)
..+ ..+.+|..+++..|..+|+++|+++|||++++|+.++|+|+|||++|||+.+++|+|+++ +|||+|| |
T Consensus 95 ~~~--~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G 172 (661)
T 2ddh_A 95 GHP--EPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTS 172 (661)
T ss_dssp TCC--CTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTT
T ss_pred chh--hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCe
Confidence 333 234466556778899999999999999999999999999999999999999999999999 7899999 9
Q ss_pred eEeeecC-CCCCCEEEEEEEeCCC---CCeeEEEEeC
Q 026317 202 QKRWIGN-STFADVLVIFARNTTT---NQINGYANQS 234 (240)
Q Consensus 202 ~K~~vs~-~~~Ad~~~v~a~~~~~---~~~~~flVp~ 234 (240)
+|+|+|| +..|||++|+|++..+ .|+++|+||.
T Consensus 173 ~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~ 209 (661)
T 2ddh_A 173 IKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPI 209 (661)
T ss_dssp SEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEec
Confidence 9999999 7899999999998532 3789999994
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.74 E-value=4.1e-18 Score=153.48 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=77.9
Q ss_pred HHhccCC--HHHHHhhchhhhcCCceEEEEeeCCCCC--------CCc-CCCceEEEEeCCEEEEeeeEeeecCCCCCCE
Q 026317 146 TIALCGS--EEQKQKYLPSLAQLNTIACWALTEPAYG--------SDA-SALNTTATKVEGGWILEGQKRWIGNSTFADV 214 (240)
Q Consensus 146 ~l~~~g~--~~~~~~~l~~l~~G~~~~~~a~tEp~~G--------sd~-~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~ 214 (240)
.+..+|+ ++||++||+++++|+.++|+|+|||+.| ||+ ..++ ++++++|||+|||+|+|+||+..||+
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~ 197 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHE 197 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSE
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCE
Confidence 4558999 9999999999999999999999999864 675 3444 88999999999999999999999999
Q ss_pred EEEEEEeCC----CCCeeEEEEeCCc
Q 026317 215 LVIFARNTT----TNQINGYANQSIK 236 (240)
Q Consensus 215 ~~v~a~~~~----~~~~~~flVp~~~ 236 (240)
++|+++++. .+++++|+||++.
T Consensus 198 ~iV~art~~~~~~~~~~s~flVp~d~ 223 (490)
T 1u8v_A 198 HIIMPTIAMTEADKDYAVSFACPSDA 223 (490)
T ss_dssp EEECCSSCCCGGGGGGCEEEEEETTC
T ss_pred EEEEEecCCCCCCCCeEEEEEEECCC
Confidence 999999742 1348899999874
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.69 E-value=7.2e-17 Score=145.14 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=71.3
Q ss_pred HHHHHhhchhhhcCCceEEEEeeCCCCC--------CCcCCCceEEE-EeCCEEEEeeeEeeecCCCCCCEEEEEEEeCC
Q 026317 153 EEQKQKYLPSLAQLNTIACWALTEPAYG--------SDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223 (240)
Q Consensus 153 ~~~~~~~l~~l~~G~~~~~~a~tEp~~G--------sd~~~~~t~a~-~~~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~ 223 (240)
++||++|||++++|+.++|+|+|||+.| ||+. +.++++ +++|||+|||+|+|+|| ..||+++|+|+++.
T Consensus 123 ~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~~ 200 (481)
T 2yyk_A 123 AENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSILL 200 (481)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecCC
Confidence 6999999999999999999999999976 6664 566664 78999999999999999 99999999999852
Q ss_pred --C--CCeeEEEEeCCc
Q 026317 224 --T--NQINGYANQSIK 236 (240)
Q Consensus 224 --~--~~~~~flVp~~~ 236 (240)
+ +++++|+||++.
T Consensus 201 ~~~~~~~~s~flVp~dt 217 (481)
T 2yyk_A 201 QAGSEKYALAFALPTST 217 (481)
T ss_dssp CTTCGGGCEEEEEETTC
T ss_pred CCCCCCeEEEEEEECCC
Confidence 1 348999999874
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.57 E-value=2.4e-15 Score=135.61 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=71.0
Q ss_pred cCC--HHHHHhhchhhhcCCceEEEEeeCCCC--------CCCcCCCceEEEEeCCEEEEeeeEeeecCCCCCCEEEEEE
Q 026317 150 CGS--EEQKQKYLPSLAQLNTIACWALTEPAY--------GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219 (240)
Q Consensus 150 ~g~--~~~~~~~l~~l~~G~~~~~~a~tEp~~--------Gsd~~~~~t~a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~a 219 (240)
+|+ .+|+++|||++++|+.+.|+|+|||+. |||+ .++++ .+++|||+|||+|.||||+..||+++|+|
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 555 588999999999999999999999986 5787 55443 45689999999999999999999999999
Q ss_pred Ee-CC--CCCeeEEEEeCCc
Q 026317 220 RN-TT--TNQINGYANQSIK 236 (240)
Q Consensus 220 ~~-~~--~~~~~~flVp~~~ 236 (240)
++ +. .+.+++|+||++.
T Consensus 205 ~t~~~~~~~~~s~FlVp~d~ 224 (515)
T 3hwc_A 205 LYRPGIPGEQVIFAAIPTNT 224 (515)
T ss_dssp CCCTTCCGGGCEEEEEETTC
T ss_pred EecCCCCCCeEEEEEEECCC
Confidence 97 32 1238999999864
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=98.62 E-value=5.2e-08 Score=87.97 Aligned_cols=83 Identities=14% Similarity=0.077 Sum_probs=63.0
Q ss_pred HHHHhhchhhhcCCceEEEEeeCCCCC-----CCcCCCceE-EEEeCCEEEEeeeEeeecCCCCCCEEEEEEEeCCC---
Q 026317 154 EQKQKYLPSLAQLNTIACWALTEPAYG-----SDASALNTT-ATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT--- 224 (240)
Q Consensus 154 ~~~~~~l~~l~~G~~~~~~a~tEp~~G-----sd~~~~~t~-a~~~~~g~~LnG~K~~vs~~~~Ad~~~v~a~~~~~--- 224 (240)
+...+|+..+..+++..+.++|+|... +....+-.+ .+++++||+|||.|.|+||+..||+++|++++...
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 445789999999999999999999631 111122233 34578999999999999999999999999987432
Q ss_pred CCeeEEEEeCCc
Q 026317 225 NQINGYANQSIK 236 (240)
Q Consensus 225 ~~~~~flVp~~~ 236 (240)
++.++|+||++.
T Consensus 214 d~~~~F~VP~dt 225 (517)
T 4g5e_A 214 DQIIFAATPVNT 225 (517)
T ss_dssp GGCEEEEEETTC
T ss_pred cceEEEEEecCC
Confidence 357899999874
Done!