BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026318
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86VS8|HOOK3_HUMAN Protein Hook homolog 3 OS=Homo sapiens GN=HOOK3 PE=1 SV=2
Length = 718
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVEL--RASEPVRAEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQ 157
E++K N++R +L T + + + NRL E+K+
Sbjct: 356 EELRKANAARSQLETYKRQVVELQNRLSEESKK 388
>sp|Q8BUK6|HOOK3_MOUSE Protein Hook homolog 3 OS=Mus musculus GN=Hook3 PE=1 SV=2
Length = 718
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVEL--RASEPVRAEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENK-------QLIAMRADIDGIRSE 171
E++K N++R +L T + + + NRL E+K + ++ +DG++ E
Sbjct: 356 EELRKANAARGQLETYKRQVVELQNRLSDESKKADKLDFEYKRLKEKVDGLQKE 409
>sp|A7YH32|CING_CANFA Cingulin OS=Canis familiaris GN=CGN PE=2 SV=1
Length = 1190
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 43/175 (24%)
Query: 71 LTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKL 130
L+ +DE RL Q + +AD++ +L+ EL A R + ++ AE +K
Sbjct: 896 LSRLQDETQRLRQALQASQADRDT---------ARLDKELLAQ---RLQGLEQEAENKK- 942
Query: 131 NSSRQELTTQIKGLTKDVNRLEAE-----------NKQLIAMRADIDGIRSELVEARRAF 179
S+ + Q+KGL + V+RLEAE +++ R +D +RSEL++ R A
Sbjct: 943 -RSQDDRARQLKGLEEKVSRLEAELDEERSTVELLTERVTRGRDQVDQLRSELMQERSA- 1000
Query: 180 EFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLNTERRACGLGKISFFLGAL 234
+Q +E + IS+ R+ + L++ L ++E G K S L L
Sbjct: 1001 -------------RQDLECDKISLERQNKDLKSRLASSE----GFQKPSASLSQL 1038
>sp|P75584|Y161_MYCPN Uncharacterized protein MG148 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_161 PE=4 SV=1
Length = 445
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 76 DEIHRLGQ--IIPKL-RADKEAHTRELFDRG-LKLEVELRASEPVRAEVVQLRAEVQKLN 131
D+I ++ Q I+ L +A +EA+ RE R KL EL SE + Q A Q N
Sbjct: 32 DQIIKVDQSNILNTLEQAQREAYEREAQSRYQTKLAKEL--SEKDNTFLKQKAAWNQAHN 89
Query: 132 SSRQELTTQIKGLTKDVNRL--EAENK-------QLIAMRADIDGIRSELVEARRAFEFE 182
+ Q+L QI L VN + E E+K Q++ + + I+ E E+++ E+E
Sbjct: 90 TQIQQLYQQITNLENQVNNIKRETESKKDNEYQQQIVKLETQLQSIKKE-TESQKDLEYE 148
Query: 183 KKANEEQIEQKQAME 197
+KAN+ + E +Q +E
Sbjct: 149 RKANKTKEENQQELE 163
>sp|P50470|SPH_STRP1 Immunoglobulin G-binding protein H OS=Streptococcus pyogenes
serotype M1 PE=1 SV=1
Length = 376
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 106 LEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDV--------------NRL 151
LE A + + AE +L AE QKL +Q +GL++D+ +L
Sbjct: 173 LEASRAAKKDLEAEHQKLEAEHQKLKEDKQISDASRQGLSRDLEASRAAKKELEANHQKL 232
Query: 152 EAENKQLIAMRADIDGIRSEL---VEARRAFEFEKKANEEQIE-QKQAMENNLISMAREI 207
EAE+++L + D R L +EA RA + E +AN +++E + +A++ L A E+
Sbjct: 233 EAEHQKLKEDKQISDASRQGLSRDLEASRAAKKELEANHQKLEAEAKALKEQLAKQAEEL 292
Query: 208 EKLRA 212
KLRA
Sbjct: 293 AKLRA 297
>sp|Q4WDD7|BRE1_ASPFU E3 ubiquitin-protein ligase bre1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bre1
PE=3 SV=2
Length = 725
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 12 DSARGFRDGPRPVLTRGLAPMHFHPMTLEEE-------IEIQRREMHRIISENRHAIDDN 64
DSA G R+ PV GL LEE E Q+ ++ ++ SEN + +
Sbjct: 247 DSASGNREEQSPV--NGLPSSAERNTELEEAHKQLVAVSEKQKEQLQKLESENANLLSQI 304
Query: 65 THLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLR 124
T L + T D+ + + +LR+ +D +K L A+ +QLR
Sbjct: 305 TELNIKRTKPTDDDYAHTDLFKQLRSQ--------YDDVVKRINHLEATN------IQLR 350
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADID-----GIRSELVEARR-- 177
E KL S R Q+ T++V + + QL MRA+ D R EL+ ++
Sbjct: 351 EEAAKLRSERTAYRNQVDEETQNV--IAEKEAQL--MRAETDLARIRNARDELLADQQMR 406
Query: 178 --AFEFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLNT 217
A E EK A + E A + + ++ E+++LR +L NT
Sbjct: 407 KAAQEQEKIATTKVQELADAAQARINALESEVDRLRLQLDNT 448
>sp|Q9P0K7|RAI14_HUMAN Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2
Length = 980
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 105 KLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRAD 164
KL+ ++ E V +EVVQ+R+EV ++ ++ + T +K ++VN L + +Q
Sbjct: 806 KLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQ------- 858
Query: 165 IDGIRSELVEARRAFEFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLN 216
+ EL E +R E K E++ + + M++E+ KL+ E LN
Sbjct: 859 ---AQEELAEMKRYAESSSKLEEDK-------DKKINEMSKEVTKLK-EALN 899
>sp|Q6DFL0|C102A_XENLA Coiled-coil domain-containing protein 102A OS=Xenopus laevis
GN=ccdc102a PE=2 SV=1
Length = 524
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 114 EPVRAEVVQLRAEVQKLNSSRQELTTQIKGL----TKDVNRLEAENKQLIAMRADIDGIR 169
E + AE+ Q + + ++LN SRQE Q+ L ++ R+ + + + +R+ +D
Sbjct: 257 EKMEAEISQWKMKCEELNKSRQEAVKQLTLLRERHQDELGRISEDLQDELGVRSSMD--- 313
Query: 170 SELVEARRAFEFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLNTE 218
+L E R E + N E+ +++ +E +++ RE +KLR ++ + E
Sbjct: 314 KKLAELRAEMEGLQAENAEEWGRRERLETEKLNLERENKKLRLQIQDLE 362
>sp|B0KWC9|CING_CALJA Cingulin OS=Callithrix jacchus GN=CGN PE=3 SV=2
Length = 1198
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 43/171 (25%)
Query: 75 KDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSR 134
+DEI RL Q + +A+++ +L+ EL A R + ++ AE +K S+
Sbjct: 907 QDEIQRLRQALQACQAERDT---------AQLDKELLAQ---RLQGLEQEAENKK--RSQ 952
Query: 135 QELTTQIKGLTKDVNRLEA---ENKQLIAMRAD--------IDGIRSELVEARRAFEFEK 183
+ Q+KGL + V+RLEA E K + + D +D +R+EL++ R A
Sbjct: 953 DDRARQLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA----- 1007
Query: 184 KANEEQIEQKQAMENNLISMAREIEKLRAELLNTERRACGLGKISFFLGAL 234
+Q +E + IS+ R+ + L+ L ++E G K S L L
Sbjct: 1008 ---------RQDLECDKISLERQNKDLKTRLASSE----GFQKPSASLSQL 1045
>sp|B1MTG4|CING_CALMO Cingulin OS=Callicebus moloch GN=CGN PE=3 SV=1
Length = 1198
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 43/171 (25%)
Query: 75 KDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSR 134
+DEI RL Q + +A+++ +L+ EL A R + ++ AE +K S+
Sbjct: 907 QDEIQRLRQALQACQAERDT---------AQLDKELLAQ---RLQGLEQEAENKK--RSQ 952
Query: 135 QELTTQIKGLTKDVNRLEA---ENKQLIAMRAD--------IDGIRSELVEARRAFEFEK 183
+ Q+KGL + V+RLEA E K + + D +D +R+EL++ R A
Sbjct: 953 DDRARQLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA----- 1007
Query: 184 KANEEQIEQKQAMENNLISMAREIEKLRAELLNTERRACGLGKISFFLGAL 234
+Q +E + IS+ R+ + L+ L ++E G K S L L
Sbjct: 1008 ---------RQDLECDKISLERQNKDLKTRLASSE----GFQKPSASLSQL 1045
>sp|A9X1A5|CING_PAPAN Cingulin OS=Papio anubis GN=CGN PE=3 SV=1
Length = 1197
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 43/175 (24%)
Query: 71 LTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKL 130
L+ +DEI RL Q + +A+++ +L+ EL A R + ++ AE +K
Sbjct: 902 LSRLQDEIQRLRQALQASQAERDT---------ARLDKELLAQ---RLQGLEQEAENKK- 948
Query: 131 NSSRQELTTQIKGLTKDVNRLEA---ENKQLIAMRAD--------IDGIRSELVEARRAF 179
S+ + Q+KGL + V+RLEA E K + + D +D +R+EL++ R A
Sbjct: 949 -RSQDDRARQLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELLQERSA- 1006
Query: 180 EFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLNTERRACGLGKISFFLGAL 234
+Q +E + IS+ R+ + L+ L ++E G K S L L
Sbjct: 1007 -------------RQDLECDKISLERQNKDLKTRLASSE----GFQKPSASLSQL 1044
>sp|P21249|ANT1_ONCVO Major antigen OS=Onchocerca volvulus GN=OVT1 PE=2 SV=2
Length = 2022
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 119 EVVQLRAEVQKLNSSRQELTTQIKGL-------TKDVNRLEAENKQLI-AMRADIDGIRS 170
E+ + RAE++KL S + +L +I GL +D +RL AE L ++ +I+ +R
Sbjct: 878 EINKYRAELEKLESDKDDLEKRIIGLQDELNEKDRDTDRLNAEIDDLKRKLQTEIEKVRK 937
Query: 171 ELVEARRAFEFEKKANEEQIEQKQAMENNLISMAREIEKLRAELLNTERRACGL 224
E + + E E++ + + SM I++LR++L + ER L
Sbjct: 938 ETTTVQERYHIEWD------EERDNHQKKIDSMNALIDELRSKLNDAERAMADL 985
>sp|Q03410|SYCP1_RAT Synaptonemal complex protein 1 OS=Rattus norvegicus GN=Sycp1 PE=2
SV=2
Length = 997
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 88 LRADKEAHTRELFDRGLKLEVELRASE----PVRAEVVQLRAEVQKLNSSRQELTTQIKG 143
LR + E+ +E +G +++ +L SE + EV++ +++ L + L QI+
Sbjct: 573 LRDELESVRKEFIQQGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN 632
Query: 144 LTKDVNRL-----------EAENKQLIAMRADIDGIRSELVEARRAFEFEKKANEEQIEQ 192
+K++ L AENKQL A ++ + EL ++ FE +++IE
Sbjct: 633 KSKNIEELHQENKALKKKSSAENKQLNAYEIKVNKLELELASTKQKFEEMINNYQKEIEI 692
Query: 193 KQAMENNLISMAREIEKLRA 212
K+ E L+ E+EK +A
Sbjct: 693 KKISEEKLLG---EVEKAKA 709
>sp|Q60563|SYCP1_MESAU Synaptonemal complex protein 1 (Fragment) OS=Mesocricetus auratus
GN=SCP1 PE=2 SV=1
Length = 845
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 25 LTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRLGQI 84
LT+ M +E+I +++ R++ + + + THL+ EL + + E + G
Sbjct: 383 LTQETNDMALELKKYQEDITNSKKQEERMLKQIENLEEKETHLRDELESVRKEFIQQGNE 442
Query: 85 IPKLRADK-EAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQIKG 143
+ K + DK E + R + LK E +++ E + LR + + + +EL + K
Sbjct: 443 V-KCKLDKSEENARSIECEVLKKEKQMKILEN---KCNNLRKQAENKSKYIEELHQENKA 498
Query: 144 LTKDVNRLEAENKQLIAMRADIDGIRSELVEARRAFEFEKKANEEQIEQKQAMENNLISM 203
L K + AE+KQL A ++ ++ EL A++ F+ +++IE K+ E L+
Sbjct: 499 LKK---KSSAESKQLNAYEIKVNKLQLELESAKQKFQEMTDNYQKEIEVKKISEEKLLG- 554
Query: 204 AREIEKLRA 212
E+EK +A
Sbjct: 555 --EVEKAKA 561
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,600,879
Number of Sequences: 539616
Number of extensions: 3021165
Number of successful extensions: 20608
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 1331
Number of HSP's that attempted gapping in prelim test: 16987
Number of HSP's gapped (non-prelim): 4137
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)