Query 026318
Match_columns 240
No_of_seqs 88 out of 90
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 10:42:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026318.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026318hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2efla1 a.238.1.4 (A:1-288) Fo 76.0 14 0.001 28.2 16.3 53 53-111 76-128 (288)
2 d1qvra2 c.37.1.20 (A:149-535) 72.8 17 0.0012 31.2 11.4 55 132-186 289-343 (387)
3 d1seta1 a.2.7.1 (A:1-110) Sery 70.3 14 0.001 25.9 8.6 27 116-142 33-59 (110)
4 d1qvra2 c.37.1.20 (A:149-535) 67.1 27 0.002 29.9 11.4 25 70-94 254-278 (387)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 62.9 6.9 0.0005 27.8 5.6 15 134-148 67-81 (107)
6 d1fxka_ a.2.5.1 (A:) Prefoldin 59.2 25 0.0018 24.6 11.6 29 115-143 5-33 (107)
7 d1vcsa1 a.47.2.1 (A:8-96) Vesi 43.9 46 0.0033 23.0 7.9 45 97-157 41-85 (89)
8 d2ap3a1 a.24.27.1 (A:12-196) H 41.3 45 0.0033 22.2 12.1 20 191-210 151-170 (185)
9 d2py8a1 a.280.1.1 (A:2-121) Ru 34.2 39 0.0028 25.3 5.8 62 48-111 54-116 (120)
10 d1seta1 a.2.7.1 (A:1-110) Sery 33.9 68 0.0049 22.1 8.5 25 116-140 69-93 (110)
11 d2ooca1 a.24.10.6 (A:8-111) Hi 31.6 44 0.0032 23.1 5.5 57 67-129 37-93 (104)
12 d2peoa1 a.280.1.1 (A:1-115) Ru 31.6 39 0.0029 24.9 5.4 58 48-107 54-112 (115)
13 d2d8da1 a.130.1.1 (A:3-82) Cho 31.0 50 0.0036 21.7 5.5 47 113-167 3-49 (80)
14 d2azeb1 e.63.1.2 (B:201-301) T 29.4 45 0.0033 23.8 5.3 33 115-147 5-37 (101)
15 d2ap3a1 a.24.27.1 (A:12-196) H 29.0 74 0.0054 21.0 11.0 7 166-172 154-160 (185)
16 d1ybza1 a.130.1.1 (A:2-75) mon 28.5 50 0.0036 21.7 5.1 37 113-149 3-39 (74)
17 d1vf7a_ f.46.1.1 (A:) Multidru 27.6 48 0.0035 24.4 5.4 31 196-226 89-119 (237)
18 d1ecma_ a.130.1.1 (A:) Chorism 27.3 51 0.0037 22.0 5.1 35 113-147 3-37 (91)
19 d1cxzb_ a.2.6.1 (B:) Protein k 23.0 1.2E+02 0.0085 21.3 6.7 41 92-132 36-77 (86)
20 d2azeb1 e.63.1.2 (B:201-301) T 23.0 78 0.0057 22.4 5.6 34 120-153 3-36 (101)
21 d1ykhb1 a.252.1.1 (B:2-130) RN 21.5 1.4E+02 0.01 21.7 8.8 51 60-114 54-104 (129)
No 1
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.02 E-value=14 Score=28.17 Aligned_cols=53 Identities=11% Similarity=0.207 Sum_probs=25.8
Q ss_pred HHHhhhhhhHhhHHHHHHHHhhHHHHHHHhhhhhhhhhhhhHhHHHHHhhhhhhhhhhh
Q 026318 53 IISENRHAIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELR 111 (240)
Q Consensus 53 Ll~dNqRLAathvaLrqeL~aaq~El~~l~~~i~~i~ae~e~q~Rel~ek~~KmEAelR 111 (240)
++.+....|..|..+-+.|.. +-+..+ ..+..+.+...+.+.+...|++.++.
T Consensus 76 ~~~~~~~~a~~h~~~a~~l~~--~i~~~l----~~~~~~~~~~~K~~~~~~~k~~k~~~ 128 (288)
T d2efla1 76 NLNEMNDYAGQHEVISENMAS--QIIVDL----ARYVQELKQERKSNFHDGRKAQQHIE 128 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555554432 112222 33334555555666666666665543
No 2
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=72.80 E-value=17 Score=31.25 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 026318 132 SSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSELVEARRAFEFEKKAN 186 (240)
Q Consensus 132 a~RQELt~qvq~ltqeL~r~~~d~qqip~l~aEid~lrqElqr~Raa~EyEKK~~ 186 (240)
..-.+|..+...++...........++-.++.+|+.++.++..+....+|++-+.
T Consensus 289 ~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~~Le~lr~~le~A~r~gd~e~Aae 343 (387)
T d1qvra2 289 AEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAE 343 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3344444555666666666666677777888888888888887777777776443
No 3
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=70.26 E-value=14 Score=25.95 Aligned_cols=27 Identities=19% Similarity=0.474 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 116 VRAEVVQLRAEVQKLNSSRQELTTQIK 142 (240)
Q Consensus 116 lk~El~Q~r~e~q~L~a~RQELt~qvq 142 (240)
+-.+...+..+++.|.+.|..++.+|-
T Consensus 33 ld~~rr~l~~~~e~l~~~rN~~sk~i~ 59 (110)
T d1seta1 33 LDREVQELKKRLQEVQTERNQVAKRVP 59 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455566666666666665553
No 4
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=67.06 E-value=27 Score=29.93 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=14.3
Q ss_pred HHHhhHHHHHHHhhhhhhhhhhhhH
Q 026318 70 ELTASKDEIHRLGQIIPKLRADKEA 94 (240)
Q Consensus 70 eL~aaq~El~~l~~~i~~i~ae~e~ 94 (240)
+|...+.++..+..-...++.|++.
T Consensus 254 el~~ler~I~qLe~E~~aL~ke~d~ 278 (387)
T d1qvra2 254 EIDALERKKLQLEIEREALKKEKDP 278 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccch
Confidence 4555556666666555666655543
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=62.95 E-value=6.9 Score=27.76 Aligned_cols=15 Identities=20% Similarity=0.293 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHH
Q 026318 134 RQELTTQIKGLTKDV 148 (240)
Q Consensus 134 RQELt~qvq~ltqeL 148 (240)
..+|..++..+..++
T Consensus 67 ~~~l~~~~e~l~~~i 81 (107)
T d1fxka_ 67 TEELQEKLETLQLRE 81 (107)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333444443333
No 6
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=59.24 E-value=25 Score=24.58 Aligned_cols=29 Identities=24% Similarity=0.300 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 115 PVRAEVVQLRAEVQKLNSSRQELTTQIKG 143 (240)
Q Consensus 115 ~lk~El~Q~r~e~q~L~a~RQELt~qvq~ 143 (240)
..=+.+.+++.+++.+.+.++.|.++++.
T Consensus 5 e~~~~~q~lq~el~~~~~q~~~le~q~~E 33 (107)
T d1fxka_ 5 HQLAQFQQLQQQAQAISVQKQTVEMQINE 33 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667777777777777777776554
No 7
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.90 E-value=46 Score=23.01 Aligned_cols=45 Identities=20% Similarity=0.385 Sum_probs=26.2
Q ss_pred HHHHhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 026318 97 RELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQ 157 (240)
Q Consensus 97 Rel~ek~~KmEAelRa~e~lk~El~Q~r~e~q~L~a~RQELt~qvq~ltqeL~r~~~d~qq 157 (240)
-+..+=+.+||-|+|+..+ +.|..+.+++.....||.+++.+.++
T Consensus 41 eEA~ell~qMelEvr~~p~----------------s~R~~~~~klr~Yk~dl~~lk~elk~ 85 (89)
T d1vcsa1 41 EEARELLEQMDLEVREIPP----------------QSRGMYSNRMRSYKQEMGKLETDFKR 85 (89)
T ss_dssp HHHHHHHHHHHHHHTTSCT----------------TTHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhCCH----------------HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445556666665533 35677777777776666655555544
No 8
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=41.28 E-value=45 Score=22.23 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=8.0
Q ss_pred HHHHHHHHhHHHHHHHHHHH
Q 026318 191 EQKQAMENNLISMAREIEKL 210 (240)
Q Consensus 191 Eq~qaMEknlisMarEvEKL 210 (240)
++....++.+-.+-.+++.+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~~ 170 (185)
T d2ap3a1 151 EKSKAIEQNYKKLKEVSDKY 170 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444443333333333
No 9
>d2py8a1 a.280.1.1 (A:2-121) RuBisCo chaperone RbcX {Synechocystis sp., strain PCC 6803 [TaxId: 1143]}
Probab=34.20 E-value=39 Score=25.25 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=47.2
Q ss_pred HHHHHHHHhhhhhhHhhHHHHHHHHhhHHHHHHHh-hhhhhhhhhhhHhHHHHHhhhhhhhhhhh
Q 026318 48 REMHRIISENRHAIDDNTHLQRELTASKDEIHRLG-QIIPKLRADKEAHTRELFDRGLKLEVELR 111 (240)
Q Consensus 48 ~EiqrLl~dNqRLAathvaLrqeL~aaq~El~~l~-~~i~~i~ae~e~q~Rel~ek~~KmEAelR 111 (240)
.=|+.|+.+|+.||--.+.-|.-++.- ...-+. .+...|+..+-.++|..++|+..++.++-
T Consensus 54 ~fl~~L~~e~~~lAlRIm~vRe~lAee--v~d~l~emv~~~I~~~N~e~~Rq~Ler~t~~~~~~~ 116 (120)
T d2py8a1 54 TFLTELLDENKELVLRILAVREDIAES--VLDFLPGMTRNSLAESNIAHRRHLLERLTRTVAEVD 116 (120)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 347899999999999999999888743 222232 44567888888999999999988887553
No 10
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=33.92 E-value=68 Score=22.10 Aligned_cols=25 Identities=20% Similarity=0.227 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 116 VRAEVVQLRAEVQKLNSSRQELTTQ 140 (240)
Q Consensus 116 lk~El~Q~r~e~q~L~a~RQELt~q 140 (240)
+++++..+..+++.|...-+++..+
T Consensus 69 l~~~~k~lk~~i~~le~~~~~~~~~ 93 (110)
T d1seta1 69 LIARGKALGEEAKRLEEALREKEAR 93 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444333333
No 11
>d2ooca1 a.24.10.6 (A:8-111) Histidine phosphotransferase ShpA {Caulobacter crescentus [TaxId: 155892]}
Probab=31.63 E-value=44 Score=23.11 Aligned_cols=57 Identities=18% Similarity=0.109 Sum_probs=42.5
Q ss_pred HHHHHHhhHHHHHHHhhhhhhhhhhhhHhHHHHHhhhhhhhhhhhcchhhHHHHHHHHHHHHH
Q 026318 67 LQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQK 129 (240)
Q Consensus 67 LrqeL~aaq~El~~l~~~i~~i~ae~e~q~Rel~ek~~KmEAelRa~e~lk~El~Q~r~e~q~ 129 (240)
|.++....+.-.|.|+-..+.+-+.. |.+-+..||...++.+.+..++.++..++..
T Consensus 37 l~~d~~~~~~~aH~LKGsa~~iGa~~------L~~~a~~lE~~~~~~~~~~~~l~~~~~~i~~ 93 (104)
T d2ooca1 37 LDPTHPGWKDAVHTVKGAARGVGAFN------LGEVCERCEAGQESLEGVRTALDAALLDIAA 93 (104)
T ss_dssp CSTTSTTHHHHHHHHHHHHHHHTCHH------HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhHHHHcCHHH------HHHHHHHHHHHHHccCchHHHHHHHHHHHHH
Confidence 34577778888888887777777654 6677778888888888888888887664443
No 12
>d2peoa1 a.280.1.1 (A:1-115) RuBisCo chaperone RbcX {Anabaena sp. [TaxId: 1167]}
Probab=31.61 E-value=39 Score=24.95 Aligned_cols=58 Identities=7% Similarity=0.153 Sum_probs=43.1
Q ss_pred HHHHHHHHhhhhhhHhhHHHHHHHHhhHHHHHHHh-hhhhhhhhhhhHhHHHHHhhhhhhh
Q 026318 48 REMHRIISENRHAIDDNTHLQRELTASKDEIHRLG-QIIPKLRADKEAHTRELFDRGLKLE 107 (240)
Q Consensus 48 ~EiqrLl~dNqRLAathvaLrqeL~aaq~El~~l~-~~i~~i~ae~e~q~Rel~ek~~KmE 107 (240)
.=|+.|+.+|+.||--.+.-|.-++ +....-+. .+...|+..+...+|+.+++.-.++
T Consensus 54 ~~l~~L~~e~~~lA~RIm~vR~~ya--e~~~e~~~e~~~~~I~~~N~elmR~~Ler~t~~~ 112 (115)
T d2peoa1 54 KYIEELFLEKPDLALRIMTVREHIA--EEIAEFLPEMVVTGIQQANMEKRRQHLERMTQVS 112 (115)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHH--HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3478899999999988888888874 44443333 4566778888888888888877765
No 13
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=30.96 E-value=50 Score=21.66 Aligned_cols=47 Identities=23% Similarity=0.326 Sum_probs=36.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 026318 113 SEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDG 167 (240)
Q Consensus 113 ~e~lk~El~Q~r~e~q~L~a~RQELt~qvq~ltqeL~r~~~d~qqip~l~aEid~ 167 (240)
.+.+|.++..+-.++-.|-..|.+++.+|-.+.+... .|....+.+.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~~~~~i~~~K~~~~--------~~i~~~~RE~ 49 (80)
T d2d8da1 3 IQALRKEVDRVNREILRLLSERGRLVQEIGRLQTELG--------LPHYDPKREE 49 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CCSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--------CCCCchHHHH
Confidence 3578999999999999999999999988887766533 5666555553
No 14
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.43 E-value=45 Score=23.79 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 115 PVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKD 147 (240)
Q Consensus 115 ~lk~El~Q~r~e~q~L~a~RQELt~qvq~ltqe 147 (240)
.|++|+..+..+-+.|....+.+..++..+|.|
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 466666666666666666666666666666654
No 15
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=29.03 E-value=74 Score=21.04 Aligned_cols=7 Identities=14% Similarity=0.311 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 026318 166 DGIRSEL 172 (240)
Q Consensus 166 d~lrqEl 172 (240)
+.+...+
T Consensus 154 ~~l~~~~ 160 (185)
T d2ap3a1 154 KAIEQNY 160 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 16
>d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.52 E-value=50 Score=21.71 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=31.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 113 SEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVN 149 (240)
Q Consensus 113 ~e~lk~El~Q~r~e~q~L~a~RQELt~qvq~ltqeL~ 149 (240)
.+.+|+++..+-.++=.|-+.|-+++.+|-.+.++..
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~~~~~I~~~K~~~~ 39 (74)
T d1ybza1 3 LKLLRKEIDKIDNQIISLLKKRLEIAQAIGKIKKELN 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999988887776644
No 17
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.62 E-value=48 Score=24.37 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=18.0
Q ss_pred HHHhHHHHHHHHHHHHHHHhhhccccccccc
Q 026318 196 MENNLISMAREIEKLRAELLNTERRACGLGK 226 (240)
Q Consensus 196 MEknlisMarEvEKLRaElanaekRa~~~~~ 226 (240)
.+.++-.....++..+..+.+..-++...|.
T Consensus 89 ~~~~~~~a~~~l~~a~~~l~~~~i~ap~~G~ 119 (237)
T d1vf7a_ 89 ANAAYLQSKAAVEQARINLRYTKVLSPISGR 119 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEECSSSEE
T ss_pred hhhhcchhHHHHHHHhhhhcccccccchhce
Confidence 3444445555666777777776666654443
No 18
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=27.27 E-value=51 Score=21.99 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=29.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 113 SEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKD 147 (240)
Q Consensus 113 ~e~lk~El~Q~r~e~q~L~a~RQELt~qvq~ltqe 147 (240)
.+.+|.++..+-.++-.|...|-+|+.+|-.+.+.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~l~~~I~~~K~~ 37 (91)
T d1ecma_ 3 LLALREKISALDEKLLALLAERRELAVEVGKAKLL 37 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999988888776654
No 19
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.04 E-value=1.2e+02 Score=21.29 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=25.1
Q ss_pred hhHhHHHHHhhhhhhhhhh-hcchhhHHHHHHHHHHHHHHHH
Q 026318 92 KEAHTRELFDRGLKLEVEL-RASEPVRAEVVQLRAEVQKLNS 132 (240)
Q Consensus 92 ~e~q~Rel~ek~~KmEAel-Ra~e~lk~El~Q~r~e~q~L~a 132 (240)
+|+.|++=.++..+-=.+- +..+.|..||-.+-..++.|..
T Consensus 36 KELKIKeGAENL~~attd~kk~~~~V~~eL~~sN~kL~~L~~ 77 (86)
T d1cxzb_ 36 KELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQ 77 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888887765554 4556666666555554443333
No 20
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.04 E-value=78 Score=22.41 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026318 120 VVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEA 153 (240)
Q Consensus 120 l~Q~r~e~q~L~a~RQELt~qvq~ltqeL~r~~~ 153 (240)
++++++|+..|...-++|-..++.+++.|.-...
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lte 36 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 36 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5677888888888888888888888888876663
No 21
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.53 E-value=1.4e+02 Score=21.67 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=36.7
Q ss_pred hhHhhHHHHHHHHhhHHHHHHHhhhhhhhhhhhhHhHHHHHhhhhhhhhhhhcch
Q 026318 60 AIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASE 114 (240)
Q Consensus 60 LAathvaLrqeL~aaq~El~~l~~~i~~i~ae~e~q~Rel~ek~~KmEAelRa~e 114 (240)
|.+.-..|-.+|+..-+.|..|-...+.+..-.|.|. .++.+||.|++..+
T Consensus 54 f~~~~~elA~dii~kakqId~LI~sLP~~~~see~Q~----~~i~~Le~E~~~~~ 104 (129)
T d1ykhb1 54 FSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQL----RKIDMLQKKLVEVE 104 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCCHHHHH----HHHHHHHHHHHHHH
Confidence 4455556667888888899999888888876666665 56677887665443
Done!