Your job contains 1 sequence.
>026325
MAIIPRSSSSLDLTISVPGFSSSDDGDHHHHQQQAGGSAMKDLDINQVPSEDTEWNNWNT
ATATTTGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELAT
QLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGP
PTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPALQSR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026325
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 510 4.8e-56 2
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 448 1.8e-48 2
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 421 1.8e-39 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 421 1.8e-39 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 413 1.3e-38 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 384 1.5e-35 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 384 1.5e-35 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 371 3.6e-34 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 370 4.6e-34 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 367 9.5e-34 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 206 1.1e-16 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 201 3.7e-16 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 193 3.8e-15 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 191 4.2e-15 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 188 1.6e-14 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 182 3.8e-14 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 182 7.4e-14 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 179 7.9e-14 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 179 1.0e-13 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 176 2.7e-13 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 172 4.4e-13 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 172 4.4e-13 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 169 9.1e-13 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 169 9.1e-13 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 160 8.2e-12 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 151 7.4e-11 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 136 2.9e-09 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 130 1.2e-08 1
SGD|S000000694 - symbol:HMRA1 "Silenced copy of a1 at HMR... 126 3.7e-08 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 105 5.6e-08 2
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 123 8.6e-08 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 121 1.5e-07 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 121 1.5e-07 1
ZFIN|ZDB-GENE-980526-403 - symbol:nkx2.2a "NK2 transcript... 136 1.8e-07 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 119 2.6e-07 1
UNIPROTKB|E2RFP2 - symbol:MEOX1 "Uncharacterized protein"... 134 2.7e-07 1
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 140 3.3e-07 1
UNIPROTKB|J9P485 - symbol:EMX2 "Uncharacterized protein" ... 115 7.6e-07 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 114 9.9e-07 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 114 9.9e-07 1
ZFIN|ZDB-GENE-030904-8 - symbol:vax2 "ventral anterior ho... 131 1.2e-06 1
RGD|1308443 - symbol:Nkx2-2 "NK2 homeobox 2" species:1011... 129 1.2e-06 1
UNIPROTKB|Q6F2E2 - symbol:vex1 "Homeobox protein vex1" sp... 130 1.2e-06 1
UNIPROTKB|H9L1U3 - symbol:H9L1U3 "Uncharacterized protein... 113 1.3e-06 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 113 1.3e-06 1
UNIPROTKB|F1NM26 - symbol:MEOX2 "Uncharacterized protein"... 130 1.5e-06 1
UNIPROTKB|A5D7C5 - symbol:MEOX2 "Uncharacterized protein"... 130 1.5e-06 1
UNIPROTKB|E2RDU9 - symbol:MEOX2 "Uncharacterized protein"... 130 1.5e-06 1
UNIPROTKB|F1SEJ3 - symbol:MEOX2 "Uncharacterized protein"... 130 1.5e-06 1
MGI|MGI:103219 - symbol:Meox2 "mesenchyme homeobox 2" spe... 130 1.5e-06 1
RGD|3079 - symbol:Meox2 "mesenchyme homeobox 2" species:1... 130 1.5e-06 1
UNIPROTKB|P39020 - symbol:Meox2 "Homeobox protein MOX-2" ... 130 1.5e-06 1
UNIPROTKB|P50222 - symbol:MEOX2 "Homeobox protein MOX-2" ... 130 1.5e-06 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 112 1.7e-06 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 111 2.2e-06 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 111 2.2e-06 1
UNIPROTKB|F1MS72 - symbol:NKX2-1 "Uncharacterized protein... 130 2.3e-06 1
MGI|MGI:108015 - symbol:Nkx3-2 "NK3 homeobox 2" species:1... 129 2.5e-06 1
RGD|3116 - symbol:Msx2 "msh homeobox 2" species:10116 "Ra... 110 2.9e-06 1
UNIPROTKB|P52953 - symbol:Msx2 "Homeobox protein MSX-2" s... 110 2.9e-06 1
UNIPROTKB|A2VDR0 - symbol:MEOX1 "Uncharacterized protein"... 126 3.1e-06 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 109 3.8e-06 1
MGI|MGI:97347 - symbol:Nkx2-2 "NK2 transcription factor r... 126 3.8e-06 1
UNIPROTKB|F1SHK3 - symbol:LOC100154384 "Uncharacterized p... 128 4.1e-06 1
UNIPROTKB|E2RDY4 - symbol:NKX3-2 "Uncharacterized protein... 127 4.4e-06 1
UNIPROTKB|I3LTH9 - symbol:NKX3-2 "Uncharacterized protein... 127 4.6e-06 1
WB|WBGene00000445 - symbol:ceh-22 species:6239 "Caenorhab... 127 4.8e-06 1
UNIPROTKB|Q58CR9 - symbol:MEOX1 "Mesenchyme homeo box 1 i... 123 4.8e-06 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 131 4.9e-06 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 108 4.9e-06 1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 108 4.9e-06 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 108 4.9e-06 1
UNIPROTKB|E1BBE1 - symbol:NKX2-2 "Uncharacterized protein... 125 5.0e-06 1
UNIPROTKB|E2RNP4 - symbol:NKX2-2 "Uncharacterized protein... 125 5.0e-06 1
UNIPROTKB|O95096 - symbol:NKX2-2 "Homeobox protein Nkx-2.... 125 5.0e-06 1
UNIPROTKB|I3LQZ1 - symbol:NKX2-2 "Uncharacterized protein... 125 5.0e-06 1
UNIPROTKB|P43697 - symbol:NKX2-2 "Homeobox protein Nkx-2.... 125 5.0e-06 1
ZFIN|ZDB-GENE-040718-149 - symbol:meox1 "mesenchyme homeo... 124 5.4e-06 1
UNIPROTKB|F1S1H4 - symbol:MEOX1 "Uncharacterized protein"... 124 5.4e-06 1
UNIPROTKB|F1N8W4 - symbol:NKX2-1 "Uncharacterized protein... 126 5.5e-06 1
FB|FBgn0038852 - symbol:CG7056 species:7227 "Drosophila m... 126 5.7e-06 1
UNIPROTKB|G3MZU0 - symbol:GSC2 "Uncharacterized protein" ... 116 6.3e-06 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 107 6.4e-06 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 107 6.4e-06 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 107 6.4e-06 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 107 6.4e-06 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 107 6.4e-06 1
UNIPROTKB|F1NJ78 - symbol:NKX2-1 "Uncharacterized protein... 126 6.5e-06 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 130 6.9e-06 1
UNIPROTKB|E1C7F6 - symbol:CDX4 "Uncharacterized protein" ... 124 7.1e-06 1
WB|WBGene00022837 - symbol:ceh-45 species:6239 "Caenorhab... 122 7.1e-06 1
MGI|MGI:103220 - symbol:Meox1 "mesenchyme homeobox 1" spe... 123 7.4e-06 1
UNIPROTKB|P50221 - symbol:MEOX1 "Homeobox protein MOX-1" ... 123 7.5e-06 1
MGI|MGI:97351 - symbol:Nkx2-6 "NK2 transcription factor r... 124 7.7e-06 1
ZFIN|ZDB-GENE-050217-3 - symbol:nkx2.2b "NK2 transcriptio... 122 8.0e-06 1
UNIPROTKB|P78367 - symbol:NKX3-2 "Homeobox protein Nkx-3.... 125 8.0e-06 1
UNIPROTKB|F1PF43 - symbol:VAX2 "Uncharacterized protein" ... 122 9.1e-06 1
UNIPROTKB|J9P7A7 - symbol:EMX1 "Uncharacterized protein" ... 115 9.2e-06 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 121 9.2e-06 1
UNIPROTKB|F7ENZ5 - symbol:NKX3-1 "Uncharacterized protein... 117 9.3e-06 1
WARNING: Descriptions of 491 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 510 (184.6 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 106/140 (75%), Positives = 115/140 (82%)
Query: 72 DDEEESCINVDGG-PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
DDEE S + DG PPRKKLRL++EQSRLLE+SFR NHTLNPKQKE LA L L+PRQ+E
Sbjct: 124 DDEEFS--HDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIE 181
Query: 131 VWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCE 190
VWFQNRRARSKLKQTEMECEYLKRWFGSLTE+N RL REVEELRAMKVGP TV S
Sbjct: 182 VWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNS----- 236
Query: 191 PLPASTLSMCPRCERVTTTA 210
AS+L+MCPRCERVT A
Sbjct: 237 ---ASSLTMCPRCERVTPAA 253
Score = 85 (35.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 1 MAIIPRSSSSLDLTISVPGFXXXXXXXXXXXXXXXXXXXMKDLDINQVPSED 52
MAI+P +SS+LDLTISVPGF LD+N++PS +
Sbjct: 74 MAILPENSSNLDLTISVPGFSSSPLSDEGSGGGRDQLR----LDMNRLPSSE 121
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 448 (162.8 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 105/179 (58%), Positives = 118/179 (65%)
Query: 40 MKDLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRL 99
M+D DINQ P + + G+ +E++S N GG RKKLRL+KEQS L
Sbjct: 31 MRDFDINQTPKTEEDREWMI-------GATPHVNEDDS--N-SGGRRRKKLRLTKEQSHL 80
Query: 100 LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSL 159
LEESF NHTL PKQK++LAT LKL RQVEVWFQNRRARSKLK TEMECEYLKRWFGSL
Sbjct: 81 LEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSL 140
Query: 160 TEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKV 218
EQNRRLQ EVEELRA+K P S L+MCPRCERVT A+D V
Sbjct: 141 KEQNRRLQIEVEELRALK-------------PSSTSALTMCPRCERVTD-AVDNDSNAV 185
Score = 75 (31.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 24/56 (42%), Positives = 28/56 (50%)
Query: 1 MAIIPRSSSSLDLTISVPGFXXXXXXXXXXXXXXXXXXXMKDLDINQVPS--EDTE 54
MA+ P +SSSLDLTIS+P F M+D DINQ P ED E
Sbjct: 1 MALSP-NSSSLDLTISIPSFSPSPSLGDHHG--------MRDFDINQTPKTEEDRE 47
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 94/171 (54%), Positives = 120/171 (70%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
GSG DDE+ N DG RKKLRLSK+Q+ +LEE+F+ + TLNPKQK LA QL L+
Sbjct: 146 GSGGSDDEDGG--NGDGS--RKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRA 201
Query: 127 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISP 186
RQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRLQ+EV ELRA+K+ P +
Sbjct: 202 RQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYM-- 259
Query: 187 HSCEPLPASTLSMCPRCERVTTTA--IDKGPTKVTTASSTPAALSPKVGTP 235
H P +TL+MCP CERV+++A + P+ TT + SP+ TP
Sbjct: 260 HMTPP---TTLTMCPSCERVSSSAATVTAAPS-TTTTPTVVGRPSPQRLTP 306
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 88/157 (56%), Positives = 109/157 (69%)
Query: 82 DGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+ G RKKLRLSK+QS LE+SF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+K
Sbjct: 184 ENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTK 243
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCP 201
LKQTE++CEYLKR SLTE+NRRLQ+EV+ELR +K P + LPA+TL+MCP
Sbjct: 244 LKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ------LPATTLTMCP 297
Query: 202 RCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPALQ 238
CERV T+A + + ++L P PA Q
Sbjct: 298 SCERVATSAAQPSTSAAHNLCLSTSSLIPVKPRPAKQ 334
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 94/174 (54%), Positives = 116/174 (66%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
G GS DDE+ S D RKKLRLSKEQ+ +LEE+F+ + TLNPKQK LA QL L+
Sbjct: 144 GGGS-DDEDGSGNGDDSS--RKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRT 200
Query: 127 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISP 186
RQVEVWFQNRRAR+KLKQTE++CEYLKR +LT++NRRLQ+EV ELRA+K +SP
Sbjct: 201 RQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALK------LSP 254
Query: 187 HSCEPL-PASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAA-LSPKVGTPALQ 238
H + P +TL+MCP CERV T+ SS+P +SP P Q
Sbjct: 255 HLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPLRQ 308
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 81/141 (57%), Positives = 104/141 (73%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
GS + D+E DG RKKLRLSK+QS +LEE+F+ + TLNPKQK+ LA QL L+
Sbjct: 114 GSRGISDDE------DGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRA 167
Query: 127 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISP 186
RQVEVWFQNRRAR+KLKQTE++CE+L+R +LTE+NRRLQ+EV ELRA+K+ P +
Sbjct: 168 RQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYM-- 225
Query: 187 HSCEPLPASTLSMCPRCERVT 207
H P +TL+MCP CE V+
Sbjct: 226 HMSPP---TTLTMCPSCEHVS 243
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 80/153 (52%), Positives = 113/153 (73%)
Query: 72 DDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEV 131
DD ++ +G RKKLRL+K+QS LLE++F+ + TLNPKQK+ LA QL L+PRQVEV
Sbjct: 114 DDHDDE----EGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEV 169
Query: 132 WFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEP 191
WFQNRRAR+KLKQTE++CE+LK+ +LT++NRRLQ+E+++L+A+K+ P + H
Sbjct: 170 WFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYM--H---- 223
Query: 192 LPASTLSMCPRCERV-------TTTAIDKGPTK 217
+PA+TL+MCP CER+ TTA+D+ K
Sbjct: 224 MPAATLTMCPSCERLGGGGVGGDTTAVDEETAK 256
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 81/139 (58%), Positives = 98/139 (70%)
Query: 69 GSMDDEEESCINVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPR 127
G+ D+EE DGG RKKLRLSK+QS LEE+F+ ++TLNPKQK LA +L L R
Sbjct: 116 GTSDEEE------DGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTAR 169
Query: 128 QVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH 187
QVEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRLQ+E ELR +K+ P
Sbjct: 170 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFY---- 225
Query: 188 SCEPLPASTLSMCPRCERV 206
+ P +TL MCP CERV
Sbjct: 226 -GQMTPPTTLIMCPSCERV 243
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 73/125 (58%), Positives = 98/125 (78%)
Query: 82 DGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+G RKKLRL+K+QS LLEESF+ + TLNPKQK+ LA QL L+PRQVEVWFQNRRAR+K
Sbjct: 107 EGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTK 166
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCP 201
LKQTE++CE+LK+ +L ++N RLQ+E++EL+ +K+ P + H +PASTL+ CP
Sbjct: 167 LKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYM--H----MPASTLTKCP 220
Query: 202 RCERV 206
CER+
Sbjct: 221 SCERI 225
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 79/138 (57%), Positives = 100/138 (72%)
Query: 69 GSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
G+ D+EE+ G RKKLRLSK+QS +LE++F+ ++TLNPKQK LA +L L RQ
Sbjct: 120 GTSDEEED----YGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQ 175
Query: 129 VEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHS 188
VEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRL++E ELRA+K+ P + S
Sbjct: 176 VEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSP-RLYGQMS 234
Query: 189 CEPLPASTLSMCPRCERV 206
P +TL MCP CERV
Sbjct: 235 ----PPTTLLMCPSCERV 248
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/129 (41%), Positives = 77/129 (59%)
Query: 71 MDDEEESCINVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
M+ +EE + DG KK RL+ EQ + LE+ F + L +K ELA L L+PRQ+
Sbjct: 55 MNGDEE--YSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQI 112
Query: 130 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSC 189
+WFQNRRARSK KQ E + + LKR F SL ++N LQ + ++L+A V++ S
Sbjct: 113 AIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQ------VMALKSR 166
Query: 190 EPLPASTLS 198
EP+ + L+
Sbjct: 167 EPIESINLN 175
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/111 (42%), Positives = 70/111 (63%)
Query: 70 SMDDEEESCINVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
+M+ EE+ + DG KK RL+ EQ + LE++F + L P++K +LA L L+PRQ
Sbjct: 68 NMNGEED--YSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQ 125
Query: 129 VEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG 179
+ +WFQNRRAR K KQ E + + LKR F +L +N LQ ++L+A +G
Sbjct: 126 IAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMG 176
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 193 (73.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 46/104 (44%), Positives = 63/104 (60%)
Query: 72 DDEEESCINVDG--GPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
++EEE+ + G G KK RLS Q + LE++F + L P++K +LA +L L+PRQV
Sbjct: 44 EEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQV 103
Query: 130 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEEL 173
VWFQNRRAR K KQ E + LK + SL L+R+ E L
Sbjct: 104 AVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESL 147
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 41/90 (45%), Positives = 57/90 (63%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQT 145
P KK RL+ EQ LLE+SF + L P++K +LA +L L+PRQV VWFQNRRAR K KQ
Sbjct: 66 PEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQL 125
Query: 146 EMECEYLKRWFGSLTEQNRRLQREVEELRA 175
E + + LK + L + + ++LR+
Sbjct: 126 ERDYDLLKSTYDQLLSNYDSIVMDNDKLRS 155
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 188 (71.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 47/115 (40%), Positives = 67/115 (58%)
Query: 68 SGSMDDE----EESCINVDGGPP---RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELAT 120
+ +M+D+ EE ++ DG KK RL+ EQ R LE+SF + L P++K +LA
Sbjct: 88 TNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAK 147
Query: 121 QLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 175
L L+PRQ+ +WFQNRRAR K KQ E + + LK+ F L N L ++L A
Sbjct: 148 ALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHA 202
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 41/87 (47%), Positives = 55/87 (63%)
Query: 88 KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEM 147
+K +LS EQ R+LE SF +H L ++K+ LA++L L PRQV VWFQNRRAR K K+ E
Sbjct: 61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED 120
Query: 148 ECEYLKRWFGSLTEQNRRLQREVEELR 174
E LK + + + RL EV L+
Sbjct: 121 EYTKLKNAYETTVVEKCRLDSEVIHLK 147
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 182 (69.1 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 88 KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEM 147
KK RL EQ + LE++F ++ L P++K +LA +L L+PRQV +WFQNRRAR K KQ E
Sbjct: 72 KKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 131
Query: 148 ECEYLKRWFGSLTEQNRRLQREVEEL 173
+ LK F +L LQR+ + L
Sbjct: 132 DYGVLKSNFDALKRNRDSLQRDNDSL 157
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 77 SCINVDGGPPR-KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQN 135
S + DGG +K +L+ EQ +LE SF H L ++K+ LA +L L PRQV VWFQN
Sbjct: 43 SVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQN 102
Query: 136 RRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELR 174
RRAR K K+ E E LK ++ RL+ EV +L+
Sbjct: 103 RRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLK 141
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 179 (68.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 45/112 (40%), Positives = 66/112 (58%)
Query: 73 DEEESCINVDGGPP---RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
DEE ++ DG KK RL EQ + LE+SF + L P++K +LA L ++PRQ+
Sbjct: 71 DEEN--LSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQI 128
Query: 130 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRL----QREVEELRAMK 177
+WFQNRRAR K +Q E + + LK+ F SL N L ++ + E+ A+K
Sbjct: 129 AIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 180
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 176 (67.0 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 40/90 (44%), Positives = 55/90 (61%)
Query: 84 GPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
G KK RL +Q + LE++F + L P++K +LA +L L+PRQV VWFQNRRAR K K
Sbjct: 55 GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 114
Query: 144 QTEMECEYLKRWFGSLTEQNRRLQREVEEL 173
Q E + LK + SL L+R+ + L
Sbjct: 115 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSL 144
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 75 EESCINVDGGPPRKKLRLSKEQSRLLEESFRHN--------HTLNPKQKEELATQLKLKP 126
EES N G +KK +++ EQ + LE SF+ LNP +K +L+ +L L+P
Sbjct: 60 EES--NSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQP 117
Query: 127 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAM 176
RQ+ VWFQNR+AR K KQ E E L++ F ++ + LQ E+ +L++M
Sbjct: 118 RQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSM 167
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 45/129 (34%), Positives = 70/129 (54%)
Query: 45 INQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESF 104
+NQ+ + GS + ++E+ + I GG RK+ +L+ EQ +LE SF
Sbjct: 32 VNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEI---GGMLRKR-KLTDEQVNMLEYSF 87
Query: 105 RHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNR 164
+ H L +KE++A +L L PRQV VWFQNRRAR K K+ E E LK ++
Sbjct: 88 GNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQC 147
Query: 165 RLQREVEEL 173
+L+ ++ +L
Sbjct: 148 QLESQILKL 156
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 91 RLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECE 150
R S EQ + LE F L P++K +LA +L L+PRQV +WFQN+RAR K KQ E E
Sbjct: 35 RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94
Query: 151 YLKRWFGSLTEQNRRLQRE----VEELRAMK 177
L++ + +L Q L++E V EL+ +K
Sbjct: 95 ILRQNYDNLASQFESLKKEKQALVSELQRLK 125
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 88 KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEM 147
KK RL+ Q LE SF+ L+ +K +L+ +L L+PRQ+ VWFQNRRAR K KQ E
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 148 ECEYLKRWFGSLTEQNRRLQREVEELRAM 176
+ L++ + ++ + + L EV++LRA+
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRAL 165
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 91 RLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECE 150
R S+EQ + LE F L P++K ++A +L L+PRQV +WFQN+RAR K KQ E E
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92
Query: 151 YLKRWFGSLTEQNRRLQREVEEL 173
L+ + +L Q +++E + L
Sbjct: 93 TLRANYNNLASQFEIMKKEKQSL 115
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 39/116 (33%), Positives = 63/116 (54%)
Query: 88 KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEM 147
KK RL+++Q R LE+ F N L P K +L+ QL L RQV VWFQN+RAR K + E+
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 148 E-CEYLKRWFGSLTEQNRRLQREVEELR--AMKVGPPTVISPHSCEPLPASTLSMC 200
+ C + +L+++ +L+ +V+ L+ + + + P+ S L C
Sbjct: 71 QHCTLQSKHEAALSDK-AKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSNLGSC 125
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 70 SMDDEEESCINVDGG-PPRKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S D E ++VD RKK R+ SK Q+ LE FR L+ ++E+LA L+L P
Sbjct: 60 SPDSTEPDVLSVDTEHEKRKKRRVLFSKAQTYELERRFRQQRYLSAPEREQLAHLLRLTP 119
Query: 127 RQVEVWFQNRRARSKLKQTEMEC 149
QV++WFQN R K+K+ +EC
Sbjct: 120 TQVKIWFQNHRY--KMKRARIEC 140
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 19 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 78
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 79 RQVKVWFQNRRMKWK 93
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 126 (49.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
P+ K +S + LE+ FR +LN K+KEE+A + + P QV VWF N+R RSK
Sbjct: 71 PKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 126
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 105 (42.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ +
Sbjct: 15 DHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKER 62
Score = 36 (17.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 220 TASSTPAALSPKVGTP 235
T+++TP P VGTP
Sbjct: 76 TSTTTPTP--PAVGTP 89
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 123 (48.4 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 73 DEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
D +E+ +G +K R +KEQ R LE F H++ L ++ E+A L L RQV+
Sbjct: 42 DNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVK 101
Query: 131 VWFQNRRARSK 141
VWFQNRR + K
Sbjct: 102 VWFQNRRMKWK 112
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 121 (47.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 87 RKKLRLS-KEQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
R+K R+ + RL LE+ F +N + ++K ELA L+L RQV++WFQNRRA+ +
Sbjct: 1 REKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 57
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 121 (47.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 85 PPRKK---LRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
P ++K +R + EQ+ LE F + L+P+++++LA L L RQV+ WFQNRRA+ +
Sbjct: 73 PQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWR 132
Query: 142 LKQTEMECE 150
+ + E E
Sbjct: 133 RVRKDGEDE 141
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 136 (52.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E S D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 115 NDKETSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 174
Query: 131 VWFQNRRARSKLKQTE--MECEYL 152
+WFQN R + K + E ME +L
Sbjct: 175 IWFQNHRYKMKRARAEKGMEVTHL 198
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 119 (46.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 4 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRM 63
Query: 139 RSK 141
+ K
Sbjct: 64 KWK 66
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 134 (52.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 37/104 (35%), Positives = 49/104 (47%)
Query: 43 LDINQVPSEDTEXXXXXXXXXXXXGSG---SMDDEEESCINVDGGPPRKKLR--LSKEQS 97
+D P ED E S D +ES +GG +K R +KEQ
Sbjct: 124 VDTTGGPGEDYEVLGSTASEMEKKSSRRKKESSDNQESRGKPEGGSKARKERTAFTKEQL 183
Query: 98 RLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
R LE F H++ L ++ E+A L L RQV+VWFQNRR + K
Sbjct: 184 RELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 140 (54.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 47/195 (24%), Positives = 86/195 (44%)
Query: 46 NQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKE-QSRL--LEE 102
N +++T G+ S + E N + P KK + ++ Q ++ +E
Sbjct: 27 NNGGTDNTNAGNDSGDQDFDSGNTSSGNHGEGLGN-NQAPRHKKKKYNRHTQLQISEMEA 85
Query: 103 SFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQ 162
FR + KQ+ +L+ QL L P Q++ WFQN+R ++K +Q E L+ L +
Sbjct: 86 FFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSE 145
Query: 163 NRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLS--MCPRCERVTTTAIDKGPTKVTT 220
N+RL+ + + K G T I + E L+ + ++++ TA K++
Sbjct: 146 NQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTA-----EKISR 200
Query: 221 ASSTPAALSPKVGTP 235
+ P P+V P
Sbjct: 201 LTGIPVRSHPRVSPP 215
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 115 (45.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 36 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 93
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 94 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 128
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 114 (45.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 144 Q 144
Q
Sbjct: 89 Q 89
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 114 (45.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 144 Q 144
Q
Sbjct: 89 Q 89
>ZFIN|ZDB-GENE-030904-8 [details] [associations]
symbol:vax2 "ventral anterior homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
Uniprot:Q801E1
Length = 307
Score = 131 (51.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/154 (31%), Positives = 70/154 (45%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + + EQ LE F+ + +++ ELA QL L QV+VWFQNRR + K Q
Sbjct: 103 PKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ 162
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELRAMKV-GPPTVISPHSCEPLPAS-TLSMCPR 202
T+ + SL N + R +E+ R + V PP +P P P + +L P
Sbjct: 163 TKDTDKRSSSTSESLATCN--ILRLLEQGRLLSVPAPPP--NPLLAHPHPGNGSLLGSPS 218
Query: 203 CERVTTTAIDKGPTKVTTASST-PAALSPKVGTP 235
T++ + T S T +LS GTP
Sbjct: 219 VS--TSSGVSSSTTPPGAGSGTFGLSLSSLSGTP 250
>RGD|1308443 [details] [associations]
symbol:Nkx2-2 "NK2 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0001159 "core promoter proximal region DNA binding"
evidence=ISO] [GO:0003323 "type B pancreatic cell development"
evidence=ISO] [GO:0003326 "pancreatic A cell fate commitment"
evidence=ISO] [GO:0003327 "type B pancreatic cell fate commitment"
evidence=ISO] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=ISO] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=ISO]
[GO:0021554 "optic nerve development" evidence=IEP] [GO:0030154
"cell differentiation" evidence=ISO] [GO:0031018 "endocrine
pancreas development" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048468 "cell
development" evidence=ISO] [GO:0048565 "digestive tract
development" evidence=ISO] [GO:0048665 "neuron fate specification"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308443 GO:GO:0005634 GO:GO:0009749 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032570 GO:GO:0021554 OrthoDB:EOG4Z36FJ
IPI:IPI00952221 Ensembl:ENSRNOT00000066457 UCSC:RGD:1308443
ArrayExpress:D3ZR25 Uniprot:D3ZR25
Length = 248
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECEYLK 153
+WFQN R + K + E E L+
Sbjct: 174 IWFQNHRYKMKRARAEKGMEDLR 196
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 130 (50.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 71 MDDEEESCINV--DGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
M D + I+V + R + + + EQ LE+SF+ N + +K L+ LKL Q
Sbjct: 113 MTDTNKKTISVCDEDAASRARTKFTAEQLEELEKSFKENRYIGSSEKRRLSKVLKLSENQ 172
Query: 129 VEVWFQNRRARSKLKQTEMECE------YLKRW-FGSLTEQNRRLQREV-----EELRAM 176
++ WFQNRR + K + + E YL + + L +Q E + + A
Sbjct: 173 IKTWFQNRRMKFKRQTQDARVEAFFSGLYLPYYGYPDLPTPGYSVQSEFPVLAPQTMAAS 232
Query: 177 KV--GP--PTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTK 217
+ GP TV+SP +P++ L P C + I PT+
Sbjct: 233 SIPFGPLHSTVMSPGLHPAIPSANLGSYP-CSSMLVRPILNEPTR 276
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 113 (44.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 83 GGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
GG R + + S Q + LE SFR + +K LA L L Q++ WFQNRR + K
Sbjct: 54 GGGARPRTKFSAVQLQELERSFREQRYIGASEKRRLAAALDLSQSQIKTWFQNRRMKFK- 112
Query: 143 KQTE 146
++T+
Sbjct: 113 RETQ 116
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 113 (44.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 77 SCIN--VDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWF 133
S +N +GG P R + +++Q LE+ F N L +++ E+A L L RQV++WF
Sbjct: 24 SAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 83
Query: 134 QNRRAR----SKLKQTEM 147
QNRR + KL T+M
Sbjct: 84 QNRRMKWKKDHKLPNTKM 101
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 167 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 226
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 227 RQVKVWFQNRRMKWK 241
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 168 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 228 RQVKVWFQNRRMKWK 242
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 68 SGSMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKP 126
S S D +E + + PRK + +KEQ R LE F H++ L ++ E+A L L
Sbjct: 169 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 228
Query: 127 RQVEVWFQNRRARSK 141
RQV+VWFQNRR + K
Sbjct: 229 RQVKVWFQNRRMKWK 243
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 112 (44.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 70 SMDDEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPR 127
S+D +ES I RKK R S +Q LE+ F L+ + ELA +L +
Sbjct: 53 SLDQAKESPIEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTET 112
Query: 128 QVEVWFQNRRARSKLKQTEME 148
QV++WFQNRR + K ++E E
Sbjct: 113 QVKIWFQNRRTKWKKIESEKE 133
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 111 (44.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R++ + +Q + LE +F+ N + +EE+A L +V VWF+NRRA+ + ++
Sbjct: 41 RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERN 100
Query: 147 MECEYLKRWFG 157
+ E K FG
Sbjct: 101 QQAELCKNGFG 111
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 111 (44.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 48 VPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHN 107
+PS DTE GS M E + ++++ P R + + EQ LEESF +
Sbjct: 1 MPSADTEFIRVIRIKSAN-GSEKML-EIPAKLDLER-PKRPRTVFTDEQLEKLEESFNTS 57
Query: 108 HTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
L+ + +LA L L QV+VWFQNRR + K
Sbjct: 58 GYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>UNIPROTKB|F1MS72 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060510 "Type II pneumocyte differentiation"
evidence=IEA] [GO:0060486 "Clara cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060430 "lung saccule
development" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042696 "menarche" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEA] [GO:0031128
"developmental induction" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021892 "cerebral cortex GABAergic interneuron
differentiation" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021798 "forebrain dorsal/ventral
pattern formation" evidence=IEA] [GO:0021795 "cerebral cortex cell
migration" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021759 "globus pallidus development"
evidence=IEA] [GO:0010719 "negative regulation of epithelial to
mesenchymal transition" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0006644 "phospholipid
metabolic process" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007411 GO:GO:0021766
GO:GO:0001764 GO:GO:0033327 GO:GO:0043565 GO:GO:0006644
GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0030336 GO:GO:0044212 GO:GO:0009725
GO:GO:0060510 GO:GO:0021983 GO:GO:0007492 GO:GO:0021877
GO:GO:0048709 GO:GO:0021759 GO:GO:0021892 GO:GO:0030512
GO:GO:0060441 GO:GO:0010719 GO:GO:0021795 GO:GO:0030878
GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
GeneTree:ENSGT00700000104098 CTD:7080 KO:K09342 GO:GO:0031128
GO:GO:0042696 EMBL:DAAA02052755 IPI:IPI00715795
RefSeq:NP_001178387.1 UniGene:Bt.55796 Ensembl:ENSBTAT00000000704
GeneID:613713 KEGG:bta:613713 OMA:MRNSSAT NextBio:20898722
Uniprot:F1MS72
Length = 370
Score = 130 (50.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/178 (24%), Positives = 80/178 (44%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQN------RRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG 179
P QV++WFQN R+A+ K Q +++ + G+ +Q Q++ ++ +V
Sbjct: 202 PTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGAGCQQQ---QQQAQQQSPRRVA 258
Query: 180 PPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPAL 237
P ++ + P + P + A + + A + AA+S G P L
Sbjct: 259 VPVLVK----DGKPCQAGAPAPGATSLQGHAQQQAQQQAQAAQAAAAAISVGSGGPGL 312
>MGI|MGI:108015 [details] [associations]
symbol:Nkx3-2 "NK3 homeobox 2" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0031016 "pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0042474 "middle ear
morphogenesis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048513 "organ development"
evidence=IMP] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048645 "organ formation" evidence=IMP] [GO:0048705 "skeletal
system morphogenesis" evidence=IMP] [GO:0048706 "embryonic skeletal
system development" evidence=IMP] [GO:0055123 "digestive system
development" evidence=IMP] [GO:0060576 "intestinal epithelial cell
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:108015 GO:GO:0005634 GO:GO:0043066
EMBL:CH466524 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007368 GO:GO:0048536 GO:GO:0031016 GO:GO:0048645
GO:GO:0048705 eggNOG:NOG279137 GO:GO:0048706 KO:K09995
GO:GO:0032331 GO:GO:0060576 GO:GO:0042474 HOGENOM:HOG000231923
GeneTree:ENSGT00700000104333 HOVERGEN:HBG006689 CTD:579 OMA:PGGWDSD
OrthoDB:EOG4CRM13 EMBL:U87957 EMBL:BC145872 EMBL:BC145874
IPI:IPI00126513 RefSeq:NP_031550.2 UniGene:Mm.2530
ProteinModelPortal:P97503 SMR:P97503 STRING:P97503
PhosphoSite:P97503 PRIDE:P97503 Ensembl:ENSMUST00000060820
GeneID:12020 KEGG:mmu:12020 InParanoid:A6H6G9 NextBio:280243
Bgee:P97503 CleanEx:MM_NKX3-2 Genevestigator:P97503
GermOnline:ENSMUSG00000049691 Uniprot:P97503
Length = 333
Score = 129 (50.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 68 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLK 125
+G +++EEE P +K+ R + +++ LE F H L+ ++ +LA LKL
Sbjct: 190 AGGVEEEEEPAAPK---PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLT 246
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYL-------KRWFGSLTEQNRRLQREVEELRAMKV 178
QV++WFQNRR ++K +Q M + L K L ++R E LR +
Sbjct: 247 ETQVKIWFQNRRYKTKRRQ--MAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSL 304
Query: 179 GP--PTVISPHSCEPLPASTLSMC 200
P P+ P+ C LP LS C
Sbjct: 305 LPLQPSYYYPYYC--LPGWALSTC 326
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 110 (43.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQT 145
PR S Q LE FR L+ ++ E ++ L L QV++WFQNRRA++K Q
Sbjct: 17 PRTPFTTS--QLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQ- 73
Query: 146 EMECEYLK 153
E E E LK
Sbjct: 74 EAELEKLK 81
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 110 (43.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQT 145
PR S Q LE FR L+ ++ E ++ L L QV++WFQNRRA++K Q
Sbjct: 17 PRTPFTTS--QLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQ- 73
Query: 146 EMECEYLK 153
E E E LK
Sbjct: 74 EAELEKLK 81
>UNIPROTKB|A2VDR0 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
Length = 254
Score = 126 (49.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 73 DEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
D +E+ +G +K R +KEQ R LE F H++ L ++ E+A L L RQV+
Sbjct: 157 DNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVK 216
Query: 131 VWFQNRRARSK 141
VWFQNRR + K
Sbjct: 217 VWFQNRRMKWK 227
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 109 (43.4 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 87 RKKLRLS-KEQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
++K R+ + RL LE+ F N + ++K ELA L L RQV++WFQNRRA+ +
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKER 57
>MGI|MGI:97347 [details] [associations]
symbol:Nkx2-2 "NK2 transcription factor related, locus 2
(Drosophila)" species:10090 "Mus musculus" [GO:0001159 "core
promoter proximal region DNA binding" evidence=IDA] [GO:0003323
"type B pancreatic cell development" evidence=IDA;IMP] [GO:0003326
"pancreatic A cell fate commitment" evidence=IGI;IMP] [GO:0003327
"type B pancreatic cell fate commitment" evidence=IMP] [GO:0003329
"pancreatic PP cell fate commitment" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0014003
"oligodendrocyte development" evidence=IMP] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation"
evidence=IGI;IMP] [GO:0021530 "spinal cord oligodendrocyte cell
fate specification" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048468 "cell
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048665 "neuron fate specification"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=IMP] Reactome:REACT_13641
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97347 GO:GO:0005654 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0003713 GO:GO:0021522 GO:GO:0048714
GO:GO:0045666 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 CTD:4821 KO:K08029
GO:GO:0003327 GO:GO:0060580 EMBL:U31566 EMBL:S83259 IPI:IPI00117502
PIR:JC4634 RefSeq:NP_035049.1 UniGene:Mm.330639
ProteinModelPortal:P42586 SMR:P42586 STRING:P42586 PRIDE:P42586
Ensembl:ENSMUST00000067075 GeneID:18088 KEGG:mmu:18088
InParanoid:P42586 NextBio:293225 Bgee:P42586 Genevestigator:P42586
GermOnline:ENSMUSG00000027434 Uniprot:P42586
Length = 273
Score = 126 (49.4 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>UNIPROTKB|F1SHK3 [details] [associations]
symbol:LOC100154384 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0060510 "Type II pneumocyte differentiation"
evidence=IEA] [GO:0060486 "Clara cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060430 "lung saccule
development" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042696 "menarche" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEA] [GO:0031128
"developmental induction" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021892 "cerebral cortex GABAergic interneuron
differentiation" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021798 "forebrain dorsal/ventral
pattern formation" evidence=IEA] [GO:0021795 "cerebral cortex cell
migration" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021759 "globus pallidus development"
evidence=IEA] [GO:0010719 "negative regulation of epithelial to
mesenchymal transition" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0006644 "phospholipid
metabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104098 KO:K09342 OMA:MRNSSAT
EMBL:CU326398 RefSeq:XP_001925552.2 RefSeq:XP_003356737.1
Ensembl:ENSSSCT00000002177 GeneID:100154384 KEGG:ssc:100154384
Uniprot:F1SHK3
Length = 369
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 44/178 (24%), Positives = 80/178 (44%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQN------RRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG 179
P QV++WFQN R+A+ K Q +++ + G+ +Q Q++ ++ +V
Sbjct: 202 PTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGAGCQQ----QQQAQQQSPRRVA 257
Query: 180 PPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPAL 237
P ++ + P + P + A + + A + AA+S G P L
Sbjct: 258 VPVLVK----DGKPCQAGAPAPGAASLQGHAQQQAQQQAQAAQAAAAAISVGSGGPGL 311
>UNIPROTKB|E2RDY4 [details] [associations]
symbol:NKX3-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060576
"intestinal epithelial cell development" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007368 GO:GO:0048536
GO:GO:0031016 GO:GO:0048645 GO:GO:0048705 GO:GO:0048706 KO:K09995
GO:GO:0032331 GO:GO:0060576 GO:GO:0042474
GeneTree:ENSGT00700000104333 CTD:579 OMA:PGGWDSD EMBL:AAEX03002487
RefSeq:XP_545940.2 Ensembl:ENSCAFT00000024441 GeneID:488822
KEGG:cfa:488822 NextBio:20862111 Uniprot:E2RDY4
Length = 333
Score = 127 (49.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 68 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLK 125
+G ++EEE P +K+ R + +++ LE F H L+ ++ +LA LKL
Sbjct: 190 AGGAEEEEEPAAPK---PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLT 246
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYL-------KRWFGSLTEQNRRLQREVEELRAMKV 178
QV++WFQNRR ++K +Q M + L K L ++R E LR +
Sbjct: 247 ETQVKIWFQNRRYKTKRRQ--MAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSL 304
Query: 179 GP--PTVISPHSCEPLPASTLSMC 200
P P+ P+ C LP LS C
Sbjct: 305 LPLQPSYYYPYYC--LPGWALSTC 326
>UNIPROTKB|I3LTH9 [details] [associations]
symbol:NKX3-2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060576 "intestinal
epithelial cell development" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043066 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0007368 GO:GO:0048536 GO:GO:0031016
GO:GO:0048645 GO:GO:0048705 GO:GO:0048706 KO:K09995 GO:GO:0032331
GO:GO:0060576 GO:GO:0042474 GeneTree:ENSGT00700000104333
OMA:PGGWDSD EMBL:FP340235 RefSeq:XP_003356908.1
Ensembl:ENSSSCT00000029872 GeneID:100625162 KEGG:ssc:100625162
Uniprot:I3LTH9
Length = 337
Score = 127 (49.8 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 68 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLK 125
+G ++EEE P +K+ R + +++ LE F H L+ ++ +LA LKL
Sbjct: 194 AGGAEEEEEPAAPK---PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLT 250
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYL-------KRWFGSLTEQNRRLQREVEELRAMKV 178
QV++WFQNRR ++K +Q M + L K L ++R E LR +
Sbjct: 251 ETQVKIWFQNRRYKTKRRQ--MAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSL 308
Query: 179 GP--PTVISPHSCEPLPASTLSMC 200
P P+ P+ C LP LS C
Sbjct: 309 LPLQPSYYYPYYC--LPGWALSTC 330
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 127 (49.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 73 DEEESCINVDGGPPRKKLR----LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
++EE+ DG RKK + +K Q+ LE FR L+ ++E LA Q++L P Q
Sbjct: 173 EDEENDEEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 232
Query: 129 VEVWFQNRRARSKLKQTE 146
V++WFQN R ++K T+
Sbjct: 233 VKIWFQNHRYKTKKSHTD 250
>UNIPROTKB|Q58CR9 [details] [associations]
symbol:MEOX1 "Mesenchyme homeo box 1 isoform 1"
species:9913 "Bos taurus" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001757 GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 EMBL:DAAA02049232 UniGene:Bt.65876 EMBL:BT021878
IPI:IPI00904405 SMR:Q58CR9 Ensembl:ENSBTAT00000020913
InParanoid:Q58CR9 Uniprot:Q58CR9
Length = 223
Score = 123 (48.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 73 DEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
D +E+ +G +K R +KEQ R LE F H++ L ++ E+A L L RQV+
Sbjct: 157 DNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVK 216
Query: 131 VWFQNRR 137
VWFQNRR
Sbjct: 217 VWFQNRR 223
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 131 (51.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRLSK---EQSRLLEESFRHNHTLNPKQKEELATQLK 123
GSGS D S + RKK R + +Q + LE SF+ + KQ+ +L+ +L
Sbjct: 11 GSGSGGDGGGSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELG 70
Query: 124 LKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG-PPT 182
L PRQ++ WFQNRR + K + + LK + +N ++ ++ G PP
Sbjct: 71 LAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPV 130
Query: 183 VISPHSCEP-LPASTLSMCPRCERVTTTAIDKGPTKVTTASST-PAALSP 230
P+ E L + ER++T A ++ S+ P +SP
Sbjct: 131 SEDPYFDEQKLRIENAHLREELERMSTIASKYMGRPISQLSTLHPMHISP 180
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 108 (43.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+K+ +K Q R LE F N +N +++ +L+ L L RQV++WFQNRR + K
Sbjct: 39 KKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 93
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 108 (43.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 82 DGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR 139
+G RK+ R ++ Q+ LE+ F +N L +++ E+A L L RQ+++WFQNRR +
Sbjct: 62 NGCTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 121
Query: 140 SKLKQTEMECEYLKRWFGSLTEQNRRLQREVEE 172
K K+ + C GS +++ ++ + EE
Sbjct: 122 WK-KENKTACS------GSSSQEKADVEDDEEE 147
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 108 (43.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 31 PQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 90
Query: 144 QTEMECEYLKR 154
Q + L++
Sbjct: 91 QLSSDLGNLEK 101
>UNIPROTKB|E1BBE1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:DAAA02035818 IPI:IPI00694388
RefSeq:NP_001179638.1 UniGene:Bt.48094 Ensembl:ENSBTAT00000013574
GeneID:531695 KEGG:bta:531695 NextBio:20875510 Uniprot:E1BBE1
Length = 273
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>UNIPROTKB|E2RNP4 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580
"ventral spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:AAEX03013746 RefSeq:XP_542867.2
ProteinModelPortal:E2RNP4 Ensembl:ENSCAFT00000008335 GeneID:485744
KEGG:cfa:485744 NextBio:20859672 Uniprot:E2RNP4
Length = 273
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>UNIPROTKB|O95096 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0048665 "neuron fate specification"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0060580 "ventral spinal cord
interneuron fate determination" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0007420 "brain development" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0031018 "endocrine
pancreas development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 Reactome:REACT_111045 GO:GO:0005654
GO:GO:0007420 GO:GO:0051091 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0031018 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 EMBL:AF019415
EMBL:AF019414 EMBL:AL133325 EMBL:BC075092 EMBL:BC075093
IPI:IPI00028339 RefSeq:NP_002500.1 UniGene:Hs.516922
ProteinModelPortal:O95096 SMR:O95096 STRING:O95096 PRIDE:O95096
DNASU:4821 Ensembl:ENST00000377142 GeneID:4821 KEGG:hsa:4821
UCSC:uc002wsi.3 CTD:4821 GeneCards:GC20M021491 HGNC:HGNC:7835
HPA:HPA003468 MIM:604612 neXtProt:NX_O95096 PharmGKB:PA31642
InParanoid:O95096 KO:K08029 OMA:GKPCHTL OrthoDB:EOG4Z36FJ
PhylomeDB:O95096 ChiTaRS:NKX2-2 GenomeRNAi:4821 NextBio:18576
Bgee:O95096 CleanEx:HS_NKX2-2 Genevestigator:O95096
GermOnline:ENSG00000125820 GO:GO:0003327 GO:GO:0060580
Uniprot:O95096
Length = 273
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>UNIPROTKB|I3LQZ1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 KO:K08029 OMA:GKPCHTL GO:GO:0003327 GO:GO:0060580
EMBL:FP565164 RefSeq:XP_003359963.1 Ensembl:ENSSSCT00000025131
GeneID:100626520 KEGG:ssc:100626520 Uniprot:I3LQZ1
Length = 273
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>UNIPROTKB|P43697 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:10036
"Mesocricetus auratus" [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003713
GO:GO:0001159 HOVERGEN:HBG006689 EMBL:X81408 PIR:I48187
ProteinModelPortal:P43697 SMR:P43697 Uniprot:P43697
Length = 273
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 72 DDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+D+E D G RK+ L SK Q+ LE FR L+ ++E LA+ ++L P QV+
Sbjct: 114 NDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 173
Query: 131 VWFQNRRARSKLKQTEMECE 150
+WFQN R + K + E E
Sbjct: 174 IWFQNHRYKMKRARAEKGME 193
>ZFIN|ZDB-GENE-040718-149 [details] [associations]
symbol:meox1 "mesenchyme homeobox 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040718-149 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 EMBL:CR847827
IPI:IPI00865440 RefSeq:NP_001002450.2 UniGene:Dr.83318
Ensembl:ENSDART00000105661 GeneID:436723 KEGG:dre:436723
NextBio:20831164 Uniprot:F1Q4R9
Length = 253
Score = 124 (48.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 35/102 (34%), Positives = 48/102 (47%)
Query: 42 DLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLR--LSKEQSRL 99
D VP+ DTE + D ++S D +K R +KEQ R
Sbjct: 132 DYSPQSVPAVDTEKKSSKRKR-------EVTDIQDSSFKADSNCKARKERTAFTKEQLRE 184
Query: 100 LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
LE F H++ L ++ E+A L L RQV+VWFQNRR + K
Sbjct: 185 LEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 226
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 124 (48.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 70 SMDDEEESCINVDGGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
S D++E G RK + +KEQ R LE F H++ L ++ E+A L L RQ
Sbjct: 155 SSDNQENRGKPEAGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQ 214
Query: 129 VEVWFQNRRARSK 141
V+VWFQNRR + K
Sbjct: 215 VKVWFQNRRMKWK 227
>UNIPROTKB|F1N8W4 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02003404 EMBL:AADN02003405
IPI:IPI00603869 Ensembl:ENSGALT00000037808 Uniprot:F1N8W4
Length = 319
Score = 126 (49.4 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G S+ D +S + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 114 GLSSLGDVSKSMAPLQSTPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 173
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEY-LKRWFGSLTEQNRRLQREVEELRAMKVGPPTVI 184
P QV++WFQN R + K + + + +++ GS +Q + V L +K G P
Sbjct: 174 PTQVKIWFQNHRYKMKRQAKDKAAQQQMQQENGSCQQQQSPRRVAVPVL--VKDGKPCQA 231
Query: 185 SPHSCEPLPASTLSMCPRCERVTTTAIDKGPT--KVTTASSTPAALSPKVG 233
++ P + + P+ T T G + + + + A SP +G
Sbjct: 232 GSNT----PTAAIQSHPQQAATTITVATNGNSLGQHQSHQTNSAGQSPDMG 278
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 84 GPPRK--KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR 139
G RK ++R + +Q++ LE F + L+P+++ LA QLKL RQV+ WFQNRRA+
Sbjct: 191 GVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAK 248
>UNIPROTKB|G3MZU0 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:DAAA02045756 EMBL:DAAA02045757
Ensembl:ENSBTAT00000065062 OMA:KPPRESC Uniprot:G3MZU0
Length = 169
Score = 116 (45.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 84 GPPRKKLR----LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR 139
GPPR+ R S+EQ R LE F N + +E LA +++L+ +VEVWF+NRRA+
Sbjct: 85 GPPRRTRRHRTIFSEEQLRALEALFMQNQYPDVGTRERLAGRIRLREERVEVWFKNRRAK 144
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 107 (42.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ +
Sbjct: 16 DHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 63
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 107 (42.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARS-KLKQTEME 148
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ K+ + +++
Sbjct: 31 DHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQ 86
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 107 (42.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 86 PRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K++R + +Q LE F H L K++ +LA +L L QV +WFQNRR + + +
Sbjct: 28 PQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQ 87
Query: 144 Q 144
Q
Sbjct: 88 Q 88
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ +
Sbjct: 14 DHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ +
Sbjct: 14 DHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>UNIPROTKB|F1NJ78 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 OMA:MRNSASA EMBL:AADN02003404
EMBL:AADN02003405 IPI:IPI00820181 Ensembl:ENSGALT00000032575
Uniprot:F1NJ78
Length = 345
Score = 126 (49.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G S+ D +S + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 140 GLSSLGDVSKSMAPLQSTPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 199
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEY-LKRWFGSLTEQNRRLQREVEELRAMKVGPPTVI 184
P QV++WFQN R + K + + + +++ GS +Q + V L +K G P
Sbjct: 200 PTQVKIWFQNHRYKMKRQAKDKAAQQQMQQENGSCQQQQSPRRVAVPVL--VKDGKPCQA 257
Query: 185 SPHSCEPLPASTLSMCPRCERVTTTAIDKGPT--KVTTASSTPAALSPKVG 233
++ P + + P+ T T G + + + + A SP +G
Sbjct: 258 GSNT----PTAAIQSHPQQAATTITVATNGNSLGQHQSHQTNSAGQSPDMG 304
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 130 (50.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 42/156 (26%), Positives = 70/156 (44%)
Query: 75 EESCINVDGGPPRKKL--RLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVW 132
EE + + P +KK R ++ Q + LE F+ + KQ++EL+ +L L+P QV+ W
Sbjct: 50 EEELQDPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFW 109
Query: 133 FQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEP- 191
FQN+R + K + E + LK L +N R + + G P I S +
Sbjct: 110 FQNKRTQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQ 169
Query: 192 -LPASTLSMCPRCERVTTTAIDK-GPTKVTTASSTP 225
L + +R++ A G + +SS P
Sbjct: 170 HLRIENARLREEIDRISAIAAKYVGKPLMANSSSFP 205
>UNIPROTKB|E1C7F6 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:AADN02013531 IPI:IPI00588048
Ensembl:ENSGALT00000012400 OMA:GKTRTRE NextBio:20824965
Uniprot:E1C7F6
Length = 279
Score = 124 (48.7 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 87 RKKLRLS-KEQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARS-KLK 143
R+K R+ + RL LE+ F +N + ++K ELA L+L RQV++WFQNRRA+ KL
Sbjct: 152 REKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKERKLM 211
Query: 144 QTEM 147
+ +M
Sbjct: 212 KKKM 215
>WB|WBGene00022837 [details] [associations]
symbol:ceh-45 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG247162 KO:K09324 GeneTree:ENSGT00700000104273
EMBL:FO081672 RefSeq:NP_490823.1 ProteinModelPortal:Q9N4L2
SMR:Q9N4L2 IntAct:Q9N4L2 MINT:MINT-6670607 EnsemblMetazoa:ZK993.1
GeneID:171689 KEGG:cel:CELE_ZK993.1 UCSC:ZK993.1 CTD:171689
WormBase:ZK993.1 HOGENOM:HOG000018606 InParanoid:Q9N4L2 OMA:SECDESD
NextBio:872315 Uniprot:Q9N4L2
Length = 229
Score = 122 (48.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R + S+EQ +LE +F H + +EELA Q LK +VEVWF+NRRA+ + KQ +
Sbjct: 111 RHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVWFKNRRAKER-KQKK 169
Query: 147 MECEYLKR-WFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPAS 195
+ K S +++ R+V+ ++ SP S L S
Sbjct: 170 DDSRTSKHSGDDSECDESDEDTRKVKRIKRENSSGKETSSPESKASLKTS 219
>MGI|MGI:103220 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
musculus" [GO:0001757 "somite specification" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
GermOnline:ENSMUSG00000001493 Uniprot:P32442
Length = 253
Score = 123 (48.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 72 DDEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
D++E +G +K R +KEQ R LE F H++ L ++ E+A L L RQV
Sbjct: 155 DNQENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 214
Query: 130 EVWFQNRRARSK 141
+VWFQNRR + K
Sbjct: 215 KVWFQNRRMKWK 226
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 123 (48.4 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 73 DEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
D +E+ +G +K R +KEQ R LE F H++ L ++ E+A L L RQV+
Sbjct: 157 DNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVK 216
Query: 131 VWFQNRRARSK 141
VWFQNRR + K
Sbjct: 217 VWFQNRRMKWK 227
>MGI|MGI:97351 [details] [associations]
symbol:Nkx2-6 "NK2 transcription factor related, locus 6
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IGI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IGI] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97351 GO:GO:0005634 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060037 GO:GO:0048565 GO:GO:0055015 GO:GO:0021854
GO:GO:0060039 GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 OrthoDB:EOG4WM4WF CTD:137814 eggNOG:NOG301183
KO:K09346 EMBL:AF045150 IPI:IPI00122998 RefSeq:NP_035050.2
UniGene:Mm.390691 ProteinModelPortal:P43688 SMR:P43688
STRING:P43688 PhosphoSite:P43688 PRIDE:P43688
Ensembl:ENSMUST00000062437 GeneID:18092 KEGG:mmu:18092
InParanoid:P43688 OMA:WETVLEM NextBio:293239 Bgee:P43688
Genevestigator:P43688 Uniprot:P43688
Length = 289
Score = 124 (48.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 45/160 (28%), Positives = 72/160 (45%)
Query: 86 PRKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P++K R+ S+ Q LE F+ L ++E LA+ L+L QV++WFQNRR +SK +
Sbjct: 122 PQRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYKSKSQ 181
Query: 144 QTEMECEYLKRWFGSLTEQNRRLQRE----VEELRAMKVGPPTVISPHSCEPLPASTLSM 199
+ + E L + ++ A +GP SP+SC A T
Sbjct: 182 RQDQTLELAGHPLAPRRVAVPVLVLDGKPCLDPDVAAFLGPYKATSPYSCFGGYAGTPYD 241
Query: 200 CPRCERVTTTAIDKGP-TKVTTASSTPAALS--PKVGTPA 236
R T+ + GP T + ++ +P S P+ PA
Sbjct: 242 ASYASRCTSASAGPGPLTPLASSGFSPGGQSAAPQGHLPA 281
>ZFIN|ZDB-GENE-050217-3 [details] [associations]
symbol:nkx2.2b "NK2 transcription factor related 2b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI] [GO:0021508 "floor plate formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050217-3 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021508 GO:GO:0021514 HOVERGEN:HBG006689
EMBL:AY729018 IPI:IPI00481458 UniGene:Dr.78851
ProteinModelPortal:Q5XX14 SMR:Q5XX14 STRING:Q5XX14
InParanoid:Q5XX14 ArrayExpress:Q5XX14 Uniprot:Q5XX14
Length = 237
Score = 122 (48.0 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 70 SMDDEEESCINVDGGPPRKK-LRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQ 128
S D+ + + D G RK+ + SK Q+ LE FR L+ ++E LA L L P Q
Sbjct: 79 SADESVDRESSEDSGKKRKRRILFSKTQTFELERRFRQQRYLSAPEREHLAKLLHLTPTQ 138
Query: 129 VEVWFQNRRARSKLKQTE 146
V++WFQN R + K + E
Sbjct: 139 VKIWFQNHRYKVKRARAE 156
>UNIPROTKB|P78367 [details] [associations]
symbol:NKX3-2 "Homeobox protein Nkx-3.2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048645 "organ formation" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0060576 "intestinal
epithelial cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=ISS] [GO:0001501 "skeletal system
development" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501
GO:GO:0007368 GO:GO:0048536 GO:GO:0031016 GO:GO:0048645
GO:GO:0048705 eggNOG:NOG279137 GO:GO:0048706 KO:K09995
GO:GO:0032331 GO:GO:0060576 GO:GO:0042474 HOGENOM:HOG000231923
HOVERGEN:HBG006689 EMBL:AF005260 EMBL:AF009801 EMBL:AF009802
EMBL:BC111966 EMBL:U89845 IPI:IPI00019228 RefSeq:NP_001180.1
UniGene:Hs.590927 ProteinModelPortal:P78367 SMR:P78367
STRING:P78367 PhosphoSite:P78367 DMDM:6016210 PRIDE:P78367
DNASU:579 Ensembl:ENST00000382438 GeneID:579 KEGG:hsa:579
UCSC:uc003gmx.2 CTD:579 GeneCards:GC04M013542 HGNC:HGNC:951
HPA:HPA027564 MIM:602183 MIM:613330 neXtProt:NX_P78367
Orphanet:228387 PharmGKB:PA162397617 InParanoid:P78367 OMA:PGGWDSD
OrthoDB:EOG4CRM13 PhylomeDB:P78367 GenomeRNAi:579 NextBio:2363
Bgee:P78367 CleanEx:HS_NKX3-2 Genevestigator:P78367
GermOnline:ENSG00000109705 Uniprot:P78367
Length = 333
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 68 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLK 125
+G ++EEE P +K+ R + +++ LE F H L+ ++ +LA LKL
Sbjct: 190 AGVAEEEEEPAAPK---PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLT 246
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYL-------KRWFGSLTEQNRRLQREVEELRAMKV 178
QV++WFQNRR ++K +Q M + L K L ++R E LR +
Sbjct: 247 ETQVKIWFQNRRYKTKRRQ--MAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSL 304
Query: 179 GP--PTVISPHSCEPLPASTLSMC 200
P P+ P+ C LP LS C
Sbjct: 305 LPLQPSYYYPYYC--LPGWALSTC 326
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 122 (48.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 47/151 (31%), Positives = 72/151 (47%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + + EQ LE F+ + +++ ELA QL L QV+VWFQNRR + K Q
Sbjct: 59 PKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ 118
Query: 145 TEMECEYLKRWFGSLTEQ--NRRLQREVEELRAMKV--GPPTV-ISPHSCEPLPASTLSM 199
+ + E KR +E + R +E+ R + V P V +SP LPA
Sbjct: 119 SR-DLE--KRTSSEASEAFATSNILRLLEQGRLLSVPRAPGLVALSPGPLG-LPAGHRGA 174
Query: 200 CPRCERVTTTAIDKGPTKVTTASSTPAALSP 230
P R ++ ++ P +T+AS++P P
Sbjct: 175 LPGDPRKSSPCLN--P--LTSASASPPLPPP 201
>UNIPROTKB|J9P7A7 [details] [associations]
symbol:EMX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010977
Ensembl:ENSCAFT00000048201 OMA:ILLQMER Uniprot:J9P7A7
Length = 168
Score = 115 (45.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR + K ++
Sbjct: 70 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQK 129
Query: 145 TEME 148
E E
Sbjct: 130 LEEE 133
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 121 (47.7 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQTEM 147
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ E
Sbjct: 121 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ-EN 179
Query: 148 ECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPT 182
KR + RRL R ++ G T
Sbjct: 180 PPSTGKR--EAEDSDTRRLSDAAARARELESGAST 212
>UNIPROTKB|F7ENZ5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9258
"Ornithorhynchus anatinus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 OMA:YCLGGWN
EMBL:AAPN01142035 EMBL:AAPN01142036 EMBL:AAPN01142037
EMBL:AAPN01142038 EMBL:AAPN01142039 EMBL:AAPN01142040
EMBL:AAPN01142041 EMBL:AAPN01142042 EMBL:AAPN01142043
EMBL:AAPN01142044 EMBL:AAPN01142045 EMBL:AAPN01142046
EMBL:AAPN01142047 Ensembl:ENSOANT00000012766 Uniprot:F7ENZ5
Length = 180
Score = 117 (46.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE F H L+ ++ LA LKL QV++WFQNRR ++K KQ
Sbjct: 70 PKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 129
>ZFIN|ZDB-GENE-031007-7 [details] [associations]
symbol:emx1 "empty spiracles homeobox 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-031007-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P06602 KO:K09317 EMBL:AF534523 IPI:IPI00496363
RefSeq:NP_937787.1 UniGene:Dr.82768 ProteinModelPortal:Q804S6
STRING:Q804S6 Ensembl:ENSDART00000057810 GeneID:378964
KEGG:dre:378964 CTD:2016 eggNOG:NOG266219
GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
HOVERGEN:HBG005024 InParanoid:Q804S6 OMA:NHHINRW OrthoDB:EOG44QT1V
NextBio:20813907 ArrayExpress:Q804S6 Bgee:Q804S6 Uniprot:Q804S6
Length = 231
Score = 121 (47.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA---RSK 141
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR R K
Sbjct: 133 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQVKVWFQNRRTKYKRQK 192
Query: 142 LKQTEMECEYLKR 154
L++ EC K+
Sbjct: 193 LEEEGPECTQKKK 205
>ZFIN|ZDB-GENE-990415-54 [details] [associations]
symbol:emx2 "empty spiracles homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0007420 "brain
development" evidence=IEP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-54 GO:GO:0005634 GO:GO:0007420 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P06602 GeneTree:ENSGT00680000099625
HOVERGEN:HBG005024 OMA:QMNPFLN EMBL:AL929298 EMBL:D32215
IPI:IPI00511425 PIR:I51737 UniGene:Dr.75105 STRING:Q90264
Ensembl:ENSDART00000058036 InParanoid:Q90264 Uniprot:Q90264
Length = 247
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 149 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 206
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K G P I
Sbjct: 207 QKLEEE------GSDSQQKKKGTHHINRWRLATKQGSPEEI 241
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 84 GPPRKKLRLS--KEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
GP K+ R + + Q+ LE+ F N L +++ E+A L L RQ+++WFQNRR + K
Sbjct: 4 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 84 GPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
GP R+ + ++ Q+ LE+ F N L +++ E+A L L RQ+++WFQNRR + K
Sbjct: 5 GPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK- 63
Query: 143 KQTEM 147
K+ ++
Sbjct: 64 KENKL 68
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 87 RKKLRLS-KEQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
++K R+ + RL LE+ F N + ++K ELA L L RQV+ WFQNRRA+ +
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKER 57
>UNIPROTKB|Q9YI38 [details] [associations]
symbol:GGMOXr1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
Length = 240
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 73 DEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVE 130
+ + S +G +K R +KEQ R LE F H++ L ++ E+A L L RQV+
Sbjct: 143 ESQPSSSKAEGSSRSRKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVK 202
Query: 131 VWFQNRRARSK 141
VWFQNRR + K
Sbjct: 203 VWFQNRRMKWK 213
>FB|FBgn0000014 [details] [associations]
symbol:abd-A "abdominal A" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
system development" evidence=TAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007385 "specification of segmental identity, abdomen"
evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
[GO:0035053 "dorsal vessel heart proper cell fate commitment"
evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
evidence=IMP] [GO:0007400 "neuroblast fate determination"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0048806 "genitalia development"
evidence=IMP] [GO:0010002 "cardioblast differentiation"
evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
[GO:0048636 "positive regulation of muscle organ development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
cell fate specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
GO:GO:0007438 Uniprot:P29555
Length = 590
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 80 NVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRR 137
N G PR++ R ++ Q+ LE+ F NH L +++ E+A L L RQ+++WFQNRR
Sbjct: 391 NGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 450
Query: 138 ARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMK 177
KLK+ E +K + EQ RR + E E+++A +
Sbjct: 451 M--KLKK---ELRAVKE----INEQARRDREEQEKMKAQE 481
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S EQ+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 148 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQ 204
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S EQ+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 148 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQ 204
>UNIPROTKB|F1NMG1 [details] [associations]
symbol:F1NMG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
Length = 228
Score = 119 (46.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 77 SCINVDGGPPRKKLRLS--KEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQ 134
SC + GGP K+ R + + Q+ LE+ F N L +++ E+A L L RQ+++WFQ
Sbjct: 143 SCADNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQ 202
Query: 135 NRRAR----SKLKQTEM 147
NRR + +KLK M
Sbjct: 203 NRRMKWKKDNKLKSMSM 219
>UNIPROTKB|F6ZYW8 [details] [associations]
symbol:LOC100412294 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942
GO:GO:0033574 GO:GO:0001047 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0030331 GO:GO:0060770 GO:GO:2001244
GO:GO:0043569 GO:GO:0048754 GeneTree:ENSGT00700000104206
GO:GO:2001022 GO:GO:0060442 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 EMBL:ACFV01082154
Ensembl:ENSCJAT00000039452 Uniprot:F6ZYW8
Length = 230
Score = 119 (46.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 41 KDLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCI--NVDGGP--PRKKLRLSKEQ 96
K+L + +TE GS +D E S ++ P P+K+ R +
Sbjct: 70 KELSSGLPAAPETEAGVAQQRPYRHLGSYLLDCENTSGALPSLPQTPKQPQKRSRAAFSH 129
Query: 97 SRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKR 154
+++ LE F H L+ ++ LA LKL QV++WFQNRR ++K KQ E L++
Sbjct: 130 TQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELGDLEK 189
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S EQ+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 157 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQ 213
>RGD|1308911 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
Length = 253
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 72 DDEEESCINVDGGPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
D+ E +G +K R +KEQ R LE F H++ L ++ E+A L L RQV
Sbjct: 155 DNPENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 214
Query: 130 EVWFQNRRARSK 141
+VWFQNRR + K
Sbjct: 215 KVWFQNRRMKWK 226
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+K+ +K Q+ LE+ F N L ++ E+A L L RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR KLK+
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRM--KLKKMN 80
Query: 147 ME 148
E
Sbjct: 81 RE 82
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR KLK+
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRM--KLKKMN 84
Query: 147 ME 148
E
Sbjct: 85 RE 86
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+K+ +K Q+ LE+ F N L ++ E+A L L RQV++WFQNRR + K
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>UNIPROTKB|O95231 [details] [associations]
symbol:VENTX "Homeobox protein VENTX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:Q6B2C0 EMBL:AL445199
eggNOG:NOG150160 OrthoDB:EOG44TP97 EMBL:AF068006 EMBL:AF288039
EMBL:BC108915 EMBL:BC108916 IPI:IPI00004447 RefSeq:NP_055283.1
UniGene:Hs.125231 ProteinModelPortal:O95231 SMR:O95231
STRING:O95231 PaxDb:O95231 PRIDE:O95231 DNASU:27287
Ensembl:ENST00000325980 GeneID:27287 KEGG:hsa:27287 UCSC:uc010quy.1
CTD:27287 GeneCards:GC10P135051 H-InvDB:HIX0036778 HGNC:HGNC:13639
MIM:607158 neXtProt:NX_O95231 PharmGKB:PA37803 HOGENOM:HOG000154815
InParanoid:O95231 OMA:DWLSQSS PhylomeDB:O95231 GenomeRNAi:27287
NextBio:50228 Bgee:O95231 CleanEx:HS_VENTX Genevestigator:O95231
Uniprot:O95231
Length = 258
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
PR + + EQ R LE F+H+ L+P +++ LA +++L Q++ WFQNRR + K
Sbjct: 92 PRVRTAFTMEQVRTLEGVFQHHQYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHK 147
>UNIPROTKB|O15522 [details] [associations]
symbol:NKX2-8 "Homeobox protein Nkx-2.8" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0001889 "liver development"
evidence=NAS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690
GO:GO:0007409 GO:GO:0050680 HOGENOM:HOG000231923 HOVERGEN:HBG006689
EMBL:AF000295 EMBL:AF000297 EMBL:AF000296 EMBL:AK313537
EMBL:BC041090 IPI:IPI00007308 RefSeq:NP_055175.2 UniGene:Hs.234763
ProteinModelPortal:O15522 SMR:O15522 STRING:O15522 PRIDE:O15522
Ensembl:ENST00000258829 GeneID:26257 KEGG:hsa:26257 UCSC:uc001wtx.3
CTD:26257 GeneCards:GC14M037049 H-InvDB:HIX0026629 HGNC:HGNC:16364
MIM:603245 neXtProt:NX_O15522 PharmGKB:PA38402 eggNOG:NOG243784
InParanoid:O15522 KO:K09347 OMA:ERSHYPS OrthoDB:EOG466VN6
PhylomeDB:O15522 GenomeRNAi:26257 NextBio:48495 Bgee:O15522
CleanEx:HS_NKX2-8 Genevestigator:O15522 GermOnline:ENSG00000136327
Uniprot:O15522
Length = 239
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 87 RKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
RKK R+ SK Q+ LE FR L+ ++E+LA+ L+L P QV++WFQN R + K
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLK 140
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 116 (45.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 163 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 222
Query: 139 RSK 141
+ K
Sbjct: 223 KWK 225
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 215 PTKVTTASSTPAALSPKVGTPAL 237
PT+V SS P + + TP+L
Sbjct: 251 PTEVPPRSSAPRPPAREPRTPSL 273
>ZFIN|ZDB-GENE-030131-6336 [details] [associations]
symbol:zgc:171531 "zgc:171531" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030131-6336 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 HOVERGEN:HBG006689 OMA:FSHSAMG
EMBL:BX322615 EMBL:BC162156 EMBL:BC162157 IPI:IPI00508292
UniGene:Dr.107185 Ensembl:ENSDART00000110871 Uniprot:B3DFT3
Length = 345
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
PR+K R+ Q+++ LE F+ L+ ++E LA+ + L P QV++WFQN R + K +
Sbjct: 159 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 218
Query: 144 QTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPP 181
+ + L++ G+L +Q + +R + +K G P
Sbjct: 219 AKDKAAQQLQQE-GNLCQQQQSPRRVAVPV-LVKDGKP 254
>FB|FBgn0261930 [details] [associations]
symbol:vnd "ventral nervous system defective" species:7227
"Drosophila melanogaster" [GO:0007400 "neuroblast fate
determination" evidence=IMP;TAS] [GO:0005634 "nucleus"
evidence=ISS;IDA;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007419 "ventral cord development"
evidence=NAS;TAS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP;TAS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007389
"pattern specification process" evidence=NAS] [GO:0007417 "central
nervous system development" evidence=NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0021782 "glial cell
development" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007420 EMBL:AE014298
GO:GO:0043565 GO:GO:0007419 GO:GO:0045944 EMBL:AL031883
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014019 GO:GO:0007400
GO:GO:0000122 GO:GO:0000981 GO:GO:0009953 GO:GO:0007398
GO:GO:0021782 eggNOG:NOG310976 GeneTree:ENSGT00700000104098
KO:K08029 EMBL:X87141 EMBL:S78691 EMBL:M27290 PIR:S57246
RefSeq:NP_476786.2 UniGene:Dm.4713 PDB:1NK2 PDB:1NK3 PDB:1QRY
PDB:1VND PDBsum:1NK2 PDBsum:1NK3 PDBsum:1QRY PDBsum:1VND
ProteinModelPortal:P22808 SMR:P22808 IntAct:P22808 MINT:MINT-283656
STRING:P22808 EnsemblMetazoa:FBtr0070110 GeneID:31003
KEGG:dme:Dmel_CG6172 CTD:31003 FlyBase:FBgn0261930
InParanoid:P22808 OMA:PILLPPW PhylomeDB:P22808
EvolutionaryTrace:P22808 GenomeRNAi:31003 NextBio:771420
Bgee:P22808 GermOnline:CG6172 Uniprot:P22808
Length = 723
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 82 DGGPPRKKLR---LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
DG P +K+ R +K Q+ LE FR L+ ++E LA+ ++L P QV++WFQN R
Sbjct: 539 DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRY 598
Query: 139 RSKLKQTE 146
++K Q E
Sbjct: 599 KTKRAQNE 606
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 197
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 142 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 198
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 197
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 143 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 199
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 142 QVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 198
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 142 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 198
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 119 (46.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 144 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRM 203
Query: 139 RSK 141
+ K
Sbjct: 204 KWK 206
>WB|WBGene00001096 [details] [associations]
symbol:dsc-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030421 "defecation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG312506
GO:GO:0030421 HSSP:P06601 EMBL:AL031620 PIR:T19379
RefSeq:NP_510497.1 UniGene:Cel.11326 ProteinModelPortal:Q93246
SMR:Q93246 EnsemblMetazoa:C18B12.3 GeneID:181599
KEGG:cel:CELE_C18B12.3 UCSC:C18B12.3 CTD:181599 WormBase:C18B12.3
GeneTree:ENSGT00680000101234 HOGENOM:HOG000018305 InParanoid:Q93246
OMA:EDRITVW NextBio:914606 Uniprot:Q93246
Length = 310
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 73 DEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVW 132
D +SC GG R + ++ QS LE+SF+ +H + K K+ +A LK+ ++ VW
Sbjct: 172 DNAQSC----GGRRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVW 227
Query: 133 FQNRRARSKLKQ 144
FQNRRA+ + K+
Sbjct: 228 FQNRRAKWRRKE 239
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 197
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/148 (27%), Positives = 64/148 (43%)
Query: 86 PRKKLRLSKEQSRLLEES---FRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
P KK R + R ++E F+ + KQ++EL+ L L+P QV+ WFQN+R + K
Sbjct: 60 PNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKA 119
Query: 143 KQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEP--LPASTLSMC 200
+ E + LK L +N R + + G P I S + L +
Sbjct: 120 QSERHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLR 179
Query: 201 PRCERVTTTAIDKGPTKVTTASSTPAAL 228
+R++ A K K +S P A+
Sbjct: 180 EEIDRISAIAA-KYVGKPLGSSFAPLAI 206
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 120 (47.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR-SKLKQ 144
++R S +Q+ LE+ F L+P +++ LA L+L RQV+ WFQNRRA+ +LKQ
Sbjct: 143 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 199
>UNIPROTKB|P43698 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:9615
"Canis lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045893 GO:GO:0005654
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOVERGEN:HBG006689 CTD:7080 KO:K09342 EMBL:X77910 PIR:I46089
RefSeq:NP_001003260.1 UniGene:Cfa.3801 ProteinModelPortal:P43698
SMR:P43698 GeneID:403940 KEGG:cfa:403940 NextBio:20817430
Uniprot:P43698
Length = 371
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/176 (23%), Positives = 74/176 (42%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQNRRARSKL----KQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPP 181
P QV++WFQN R + K K + + + G Q++ ++ +V P
Sbjct: 202 PTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGAGCPQQQQAQQQSPRRVAVP 261
Query: 182 TVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPAL 237
++ + P + P + A + + A + AA+S G P L
Sbjct: 262 VLVK----DGKPCQAGAPAPGAGSLQGHAQQQAQQQAQAAQAAAAAISVGSGGPGL 313
>ZFIN|ZDB-GENE-070615-29 [details] [associations]
symbol:cdx1b "caudal type homeobox 1 b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IMP] [GO:0030855 "epithelial cell
differentiation" evidence=IMP] [GO:0050673 "epithelial cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI] [GO:0001706 "endoderm
formation" evidence=IMP] [GO:0001889 "liver development"
evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-070615-29 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0031016 GO:GO:0050673 GO:GO:0000976 GO:GO:0030855
GO:GO:0048546 eggNOG:NOG291290 KO:K09312 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 GO:GO:0001706
EMBL:CABZ01024763 EMBL:CABZ01024764 EMBL:CABZ01095295 EMBL:BC142877
EMBL:AY761094 IPI:IPI00772764 RefSeq:NP_001092232.1
UniGene:Dr.111219 SMR:A5PLE8 STRING:A5PLE8
Ensembl:ENSDART00000081993 GeneID:100004956 KEGG:dre:100004956
CTD:100004956 OMA:YSDFAGY NextBio:20786452 Uniprot:A5PLE8
Length = 255
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 83 GGPPRKKLR---LSKEQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
GG R K + + + RL LE+ F ++ + ++K ELAT L L RQV++WFQNRRA
Sbjct: 140 GGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATALSLSERQVKIWFQNRRA 199
Query: 139 RS-KLKQTEME 148
+ K+ + +M+
Sbjct: 200 KERKINKKKMQ 210
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 102 (41.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
R + + EQ + L+ F+ N + ++++ LA +L L Q+++WFQN+RA+ K
Sbjct: 5 RPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 102 (41.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR KLK+
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM--KLKKMS 80
Query: 147 ME 148
E
Sbjct: 81 RE 82
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 102 (41.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
PR++ + EQ LLE F + + ++E LA L L QV++WFQNRR R +
Sbjct: 24 PRRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIRMR 79
>UNIPROTKB|E1B710 [details] [associations]
symbol:NKX3-2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060576 "intestinal
epithelial cell development" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043066 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0007368 GO:GO:0048536 GO:GO:0031016
GO:GO:0048645 GO:GO:0048705 GO:GO:0048706 KO:K09995 GO:GO:0032331
GO:GO:0060576 GO:GO:0042474 GeneTree:ENSGT00700000104333 CTD:579
OMA:PGGWDSD EMBL:DAAA02018685 IPI:IPI00707850 RefSeq:NP_001180062.1
UniGene:Bt.106450 Ensembl:ENSBTAT00000014473 GeneID:616907
KEGG:bta:616907 NextBio:20900385 Uniprot:E1B710
Length = 330
Score = 121 (47.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 86 PRKK---LRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
PRKK S Q LE F H L+ ++ +LA LKL QV++WFQNRR ++K
Sbjct: 201 PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKR 260
Query: 143 KQTEMECEYL-------KRWFGSLTEQNRRLQREVEELRAMKVGP--PTVISPHSCEPLP 193
+Q M + L K L ++R E LR + P P+ P+ C LP
Sbjct: 261 RQ--MAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSLLPLQPSYYYPYYC--LP 316
Query: 194 ASTLSMC 200
LS C
Sbjct: 317 GWALSTC 323
>UNIPROTKB|F6Y020 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9544
"Macaca mulatta" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:JV636177
RefSeq:NP_001253152.1 UniGene:Mmu.35668 Ensembl:ENSMMUT00000013683
GeneID:710591 KEGG:mcc:710591 NextBio:19966398 Uniprot:F6Y020
Length = 232
Score = 118 (46.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 121 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 180
Query: 144 QTEMECEYLKR 154
Q E L++
Sbjct: 181 QLSSELGDLEK 191
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 120 (47.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/115 (33%), Positives = 56/115 (48%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + + EQ LE F+ + +++ ELA QL L QV+VWFQNRR + K Q
Sbjct: 102 PKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ 161
Query: 145 TEMECEYLKRWFGSLTEQ--NRRLQREVEELRAMKV--GPPTVISPHSCEPLPAS 195
+ + E KR S +E + R +E+ R + V P + S LPAS
Sbjct: 162 SR-DLE--KRASSSASEAFATSNILRLLEQGRLLSVPRAPSLLALTPSLPGLPAS 213
>UNIPROTKB|Q99801 [details] [associations]
symbol:NKX3-1 "Homeobox protein Nkx-3.1" species:9606 "Homo
sapiens" [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0035907 "dorsal aorta development" evidence=IEA]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC;IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030284 "estrogen receptor activity"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IMP] [GO:0005622 "intracellular" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0010942 "positive regulation of cell death"
evidence=IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IDA] [GO:0071850 "mitotic cell cycle arrest"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IDA] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IDA] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IDA] [GO:0010629 "negative
regulation of gene expression" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IMP;IDA] [GO:0043569
"negative regulation of insulin-like growth factor receptor
signaling pathway" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS;IMP] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=ISS] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0043621
"protein self-association" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEP] [GO:0071347
"cellular response to interleukin-1" evidence=IEP] [GO:0035690
"cellular response to drug" evidence=IEP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:2001235 "positive regulation of apoptotic
signaling pathway" evidence=IDA] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:2000836 "positive regulation of androgen
secretion" evidence=IDA] [GO:0030521 "androgen receptor signaling
pathway" evidence=IDA] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0004882 "androgen receptor
activity" evidence=IDA] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=IDA] [GO:0030295 "protein
kinase activator activity" evidence=IDA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IDA] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=IDA] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045860
"positive regulation of protein kinase activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0071456 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0060037 GO:GO:0033574
GO:GO:0001047 Pathway_Interaction_DB:ar_pathway GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 EMBL:U91540 EMBL:U80669 EMBL:AF247704
EMBL:AF249669 EMBL:AF249670 EMBL:AF249671 EMBL:AF249672
EMBL:BC074863 EMBL:BC074864 IPI:IPI00018412 IPI:IPI00215781
IPI:IPI00215782 IPI:IPI00215783 IPI:IPI00848258
RefSeq:NP_001243268.1 RefSeq:NP_006158.2 UniGene:Hs.55999 PDB:2L9R
PDBsum:2L9R ProteinModelPortal:Q99801 SMR:Q99801 IntAct:Q99801
STRING:Q99801 PhosphoSite:Q99801 DMDM:17377578 PRIDE:Q99801
DNASU:4824 Ensembl:ENST00000380871 Ensembl:ENST00000523261
GeneID:4824 KEGG:hsa:4824 UCSC:uc011kzx.2 CTD:4824
GeneCards:GC08M023536 HGNC:HGNC:7838 HPA:HPA025693 MIM:602041
neXtProt:NX_Q99801 PharmGKB:PA31645 eggNOG:NOG238786
InParanoid:Q99801 OMA:TEPERHL OrthoDB:EOG46Q6TS PhylomeDB:Q99801
ChiTaRS:NKX3-1 GenomeRNAi:4824 NextBio:18580 Bgee:Q99801
CleanEx:HS_NKX3-1 Genevestigator:Q99801 GermOnline:ENSG00000167034
GO:GO:0035907 GO:GO:2000836 Uniprot:Q99801
Length = 234
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 123 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 182
Query: 144 QTEMECEYLKR 154
Q E L++
Sbjct: 183 QLSSELGDLEK 193
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 117 (46.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 84 GPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G PR++ R ++ Q+ LE+ F NH L +++ E+A L L RQ+++WFQNRR K
Sbjct: 40 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 97
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELR 174
LK+ E +K + EQ RR + E ++++
Sbjct: 98 LKK---ELRAVKE----INEQARREREEQDKMK 123
>MGI|MGI:95842 [details] [associations]
symbol:Gsx1 "GS homeobox 1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IGI] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0048663 "neuron fate commitment"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95842 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527
GO:GO:0021984 GO:GO:0048663 GO:GO:0021854 CTD:219409
eggNOG:NOG264927 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
OMA:HNCKCSS OrthoDB:EOG4GTKDV EMBL:U21224 IPI:IPI00133256
PIR:S63604 RefSeq:NP_032204.1 UniGene:Mm.4797
ProteinModelPortal:P31315 SMR:P31315 STRING:P31315 PRIDE:P31315
Ensembl:ENSMUST00000065382 GeneID:14842 KEGG:mmu:14842
GeneTree:ENSGT00700000104161 InParanoid:P31315 NextBio:287067
Bgee:P31315 CleanEx:MM_GSX1 Genevestigator:P31315
GermOnline:ENSMUSG00000053129 Uniprot:P31315
Length = 261
Score = 119 (46.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 72 DDEEESCINVDGG----PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLK 125
D + CI+VD P K++R + ++LLE F N L+ ++ E+AT L L
Sbjct: 127 DPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLS 186
Query: 126 PRQVEVWFQNRRARSK 141
+QV++WFQNRR + K
Sbjct: 187 EKQVKIWFQNRRVKHK 202
>UNIPROTKB|G3V634 [details] [associations]
symbol:Gsx1 "Protein Gsx1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310020 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH474012 CTD:219409 KO:K09310 OMA:HNCKCSS
GeneTree:ENSGT00700000104161 RefSeq:NP_001178592.1
UniGene:Rn.228201 Ensembl:ENSRNOT00000001260 GeneID:288457
KEGG:rno:288457 NextBio:628114 Uniprot:G3V634
Length = 261
Score = 119 (46.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 72 DDEEESCINVDGG----PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLK 125
D + CI+VD P K++R + ++LLE F N L+ ++ E+AT L L
Sbjct: 127 DPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLS 186
Query: 126 PRQVEVWFQNRRARSK 141
+QV++WFQNRR + K
Sbjct: 187 EKQVKIWFQNRRVKHK 202
>UNIPROTKB|E1BRX3 [details] [associations]
symbol:EMX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0021796 "cerebral
cortex regionalization" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0042493 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:NHHINRW EMBL:AADN02049020
IPI:IPI00586440 Ensembl:ENSGALT00000025935 Uniprot:E1BRX3
Length = 235
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA+ L L QV+VWFQNRR + K ++
Sbjct: 137 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKRQK 196
Query: 145 TEME 148
E E
Sbjct: 197 LEEE 200
>UNIPROTKB|P18264 [details] [associations]
symbol:ro "Homeobox protein rough" species:7244 "Drosophila
virilis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007463 "R2/R5
cell fate commitment" evidence=ISS] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042067
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0050896
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH940650 KO:K09362 eggNOG:NOG282802 OMA:VANGFMS
OrthoDB:EOG4P8D17 GO:GO:0007463 EMBL:M35372 PIR:A35967
RefSeq:XP_002054799.1 STRING:P18264 EnsemblMetazoa:FBtr0238517
GeneID:6630225 KEGG:dvi:Dvir_GJ22592 FlyBase:FBgn0013136
InParanoid:P18264 Uniprot:P18264
Length = 340
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 82 DGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+G R++ S EQ+ LE F N ++ ++ ELA L+L Q+++WFQNRRA+ K
Sbjct: 161 EGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLSETQIKIWFQNRRAKDK 220
Query: 142 -LKQTEMECEY 151
+++ +++ Y
Sbjct: 221 RIEKAQIDQHY 231
>UNIPROTKB|E2RI77 [details] [associations]
symbol:GSX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663
"neuron fate commitment" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
GO:GO:0048663 GO:GO:0021854 OMA:HNCKCSS
GeneTree:ENSGT00700000104161 EMBL:AAEX03014242
Ensembl:ENSCAFT00000010870 Uniprot:E2RI77
Length = 263
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 72 DDEEESCINVDGG----PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLK 125
D + CI+VD P K++R + ++LLE F N L+ ++ E+AT L L
Sbjct: 128 DPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLS 187
Query: 126 PRQVEVWFQNRRARSK 141
+QV++WFQNRR + K
Sbjct: 188 EKQVKIWFQNRRVKHK 203
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N +GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 150 NYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRM 209
Query: 139 RSK 141
+ K
Sbjct: 210 KWK 212
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N +GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 150 NYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRM 209
Query: 139 RSK 141
+ K
Sbjct: 210 KWK 212
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N +GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 150 NYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRM 209
Query: 139 RSK 141
+ K
Sbjct: 210 KWK 212
>UNIPROTKB|Q9H4S2 [details] [associations]
symbol:GSX1 "GS homeobox 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
GO:GO:0048663 GO:GO:0021854 EMBL:AB044157 EMBL:AB044158
EMBL:AL390738 IPI:IPI00028199 RefSeq:NP_663632.1 UniGene:Hs.351785
ProteinModelPortal:Q9H4S2 SMR:Q9H4S2 STRING:Q9H4S2 DMDM:27923786
PRIDE:Q9H4S2 DNASU:219409 Ensembl:ENST00000302945 GeneID:219409
KEGG:hsa:219409 UCSC:uc001urr.1 CTD:219409 GeneCards:GC13P028366
HGNC:HGNC:20374 HPA:HPA047096 neXtProt:NX_Q9H4S2
PharmGKB:PA162390373 eggNOG:NOG264927 HOGENOM:HOG000010106
HOVERGEN:HBG003555 InParanoid:Q9H4S2 KO:K09310 OMA:HNCKCSS
OrthoDB:EOG4GTKDV GenomeRNAi:219409 NextBio:90587 Bgee:Q9H4S2
CleanEx:HS_GSX1 Genevestigator:Q9H4S2 GermOnline:ENSG00000169840
Uniprot:Q9H4S2
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 72 DDEEESCINVDGG----PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLK 125
D + CI+VD P K++R + ++LLE F N L+ ++ E+AT L L
Sbjct: 128 DPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLS 187
Query: 126 PRQVEVWFQNRRARSK 141
+QV++WFQNRR + K
Sbjct: 188 EKQVKIWFQNRRVKHK 203
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N +GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 150 NYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRM 209
Query: 139 RSK 141
+ K
Sbjct: 210 KWK 212
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N +GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 150 NYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRM 209
Query: 139 RSK 141
+ K
Sbjct: 210 KWK 212
>UNIPROTKB|F1RSW3 [details] [associations]
symbol:GSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021854
"hypothalamus development" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984 GO:GO:0048663
GO:GO:0021854 OMA:HNCKCSS GeneTree:ENSGT00700000104161
EMBL:CU633812 Ensembl:ENSSSCT00000010201 Uniprot:F1RSW3
Length = 265
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 72 DDEEESCINVDGG----PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLK 125
D + CI+VD P K++R + ++LLE F N L+ ++ E+AT L L
Sbjct: 126 DPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLS 185
Query: 126 PRQVEVWFQNRRARSK 141
+QV++WFQNRR + K
Sbjct: 186 EKQVKIWFQNRRVKHK 201
>ZFIN|ZDB-GENE-010404-1 [details] [associations]
symbol:nkx2.1b "NK2 homeobox 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010404-1 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P23441 HOVERGEN:HBG006689
KO:K09342 EMBL:AF321112 IPI:IPI00487938 RefSeq:NP_571851.1
UniGene:Dr.78792 ProteinModelPortal:Q98TX4 SMR:Q98TX4 PRIDE:Q98TX4
GeneID:81883 KEGG:dre:81883 CTD:81883 InParanoid:Q98TX4
NextBio:20934177 ArrayExpress:Q98TX4 Bgee:Q98TX4 Uniprot:Q98TX4
Length = 346
Score = 121 (47.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/106 (30%), Positives = 59/106 (55%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
PR+K R+ Q+++ LE F+ L+ ++E LA+ + L P QV++WFQN R + K +
Sbjct: 158 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 217
Query: 144 -QTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHS 188
+ ++ + +++ GS +Q ++ R V +K G P S H+
Sbjct: 218 AKDKVSQQQMQQDNGSC-QQQQQSPRRVAVPVLVKDGKPCQGSSHT 262
>UNIPROTKB|D4A426 [details] [associations]
symbol:100365058 "Homeo box B2 (Predicted)" species:10116
"Rattus norvegicus" [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
EMBL:CH473948 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
CTD:3212 OrthoDB:EOG4QC167 GO:GO:0048857 IPI:IPI00958412
RefSeq:XP_002724587.1 RefSeq:XP_002727852.1 UniGene:Rn.231109
Ensembl:ENSRNOT00000011213 GeneID:100361765 KEGG:rno:100361765
UCSC:RGD:2319509 Uniprot:D4A426
Length = 355
Score = 121 (47.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/109 (32%), Positives = 52/109 (47%)
Query: 40 MKDLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRL 99
MK+ + PS+ G GS D + GG ++LR + ++L
Sbjct: 97 MKEKKSAKKPSQSAATPSPAASSVRASGVGSPSDGPG--LPESGGSGSRRLRTAYTNTQL 154
Query: 100 LE--ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
LE + F N L ++ E+A L L RQV+VWFQNRR + K +QT+
Sbjct: 155 LELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK-RQTQ 202
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 83 GGPPRKKLR----LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
G PP++K R ++EQ LE +F H + +E+LA ++ LK +VEVWF+NRRA
Sbjct: 280 GPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRA 339
Query: 139 RSKLKQTEMECEYLKR 154
+ + KQ E E L++
Sbjct: 340 KWR-KQKREEQERLRK 354
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 118 (46.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 145 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRM 204
Query: 139 RSK 141
+ K
Sbjct: 205 KWK 207
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 68 SGSMDDEEESCINVDGG--PPRKKL--RLSKEQSRLLEESFRHNHTLNPKQKEELATQLK 123
SGS + E S + D PPRKK R + +Q + LE F+ + KQ+ EL+ +L
Sbjct: 113 SGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC 172
Query: 124 LKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTV 183
L+ RQV+ WFQNRR + K + E L++ L +N ++ + G P +
Sbjct: 173 LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPAM 232
Query: 184 ISPHSCE 190
+ S E
Sbjct: 233 LGDVSLE 239
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 73 DEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVW 132
++ E C+ G +K++ +K Q + LE + N +N ++ ++ L RQV +W
Sbjct: 34 NQPEMCVYRRGR--KKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIW 91
Query: 133 FQNRRARSK 141
FQNRR + K
Sbjct: 92 FQNRRVKDK 100
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 93 SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
S Q LE+ F + L+ ++ E+A L+L+ QV+VWFQNRR + K ++ E
Sbjct: 9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 93 SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
S Q LE+ F + L+ ++ E+A L+L+ QV+VWFQNRR + K ++ E
Sbjct: 9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR KLK+
Sbjct: 21 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRM--KLKKMN 78
Query: 147 ME 148
E
Sbjct: 79 RE 80
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR KLK+
Sbjct: 22 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRM--KLKKMN 79
Query: 147 ME 148
E
Sbjct: 80 RE 81
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
P + + ++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR + K
Sbjct: 12 PARGVANCRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
P + + ++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR + K
Sbjct: 12 PARGVANCRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>ZFIN|ZDB-GENE-990415-130 [details] [associations]
symbol:hesx1 "homeo box (expressed in ES cells) 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-130 GO:GO:0005634 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:8820
HOVERGEN:HBG004226 KO:K09354 HSSP:P06601 eggNOG:KOG0490 EMBL:U65433
IPI:IPI00501189 RefSeq:NP_571424.1 UniGene:Dr.160293 UniGene:Dr.226
ProteinModelPortal:P79738 GeneID:30620 KEGG:dre:30620
InParanoid:P79738 NextBio:20806982 Uniprot:P79738
Length = 161
Score = 110 (43.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R + S Q ++LE F+ N +EELA +L+L ++++WFQNRRA KLK++
Sbjct: 82 RPRTAFSSVQIKILESVFQVNSYPGIDIREELAKKLQLDEDRIQIWFQNRRA--KLKRSH 139
Query: 147 MECEYL 152
E ++L
Sbjct: 140 RESQFL 145
>UNIPROTKB|Q91898 [details] [associations]
symbol:hesx1-b "Homeobox expressed in ES cells 1-B"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0060061 "Spemann organizer formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045664 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 HOVERGEN:HBG004226 KO:K09354 GO:GO:0060061
EMBL:X60099 EMBL:X70282 PIR:S31859 RefSeq:NP_001156042.1
UniGene:Xl.131 ProteinModelPortal:Q91898 IntAct:Q91898
GeneID:397950 KEGG:xla:397950 CTD:397950 Xenbase:XB-GENE-864952
Uniprot:Q91898
Length = 187
Score = 114 (45.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R + ++ Q +LE FR N +EELA++L L ++++WFQNRRA KLK++
Sbjct: 112 RPRTAFTRSQIEILENVFRVNSYPGIDVREELASKLALDEDRIQIWFQNRRA--KLKRSH 169
Query: 147 MECEYL 152
E ++L
Sbjct: 170 RESQFL 175
>UNIPROTKB|P70061 [details] [associations]
symbol:nkx3-2 "Homeobox protein Nkx-3.2" species:8355
"Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09995
HSSP:P23441 HOVERGEN:HBG006689 CTD:579 EMBL:U75487
RefSeq:NP_001079282.1 UniGene:Xl.226 ProteinModelPortal:P70061
SMR:P70061 GeneID:378569 KEGG:xla:378569 Xenbase:XB-GENE-876836
Uniprot:P70061
Length = 329
Score = 120 (47.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 70 SMDDEEESCINVDGGPPRKKLRLSKE-----QSRLLEESFRHNHTLNPKQKEELATQLKL 124
S DE+ C + PP+++ + S+ Q LE F H L+ ++ +LA LKL
Sbjct: 182 SPPDEDPKCEQLMLEPPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKL 241
Query: 125 KPRQVEVWFQNRRARSKLKQ 144
QV++WFQNRR ++K +Q
Sbjct: 242 TETQVKIWFQNRRYKTKRRQ 261
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 70 SMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQL----KLK 125
S D + C+ D G K +R + EQ LE + + ++++L + ++
Sbjct: 4 SCKDGKLGCL--DNG---KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIE 58
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYLKRWFGS----LTEQNRRLQREVEELRAMKVGPP 181
P+Q++VWFQNRR R K ++ + + R + L E+N RLQ++V +L V
Sbjct: 59 PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL----VHEN 114
Query: 182 TVISPHSCEP-LPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAAL 228
+ H+ P LPA S CE V T+ + ++ ++PA L
Sbjct: 115 SYFRQHTPNPSLPAKDTS----CESVVTSGQHQLASQNPQRDASPAGL 158
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 70 SMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQL----KLK 125
SMDD + D G K +R + EQ LE + + ++++L + ++
Sbjct: 6 SMDDRDSPDKGFDSG---KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIE 62
Query: 126 PRQVEVWFQNRRARSKLKQTEMECEYLKRWFGS----LTEQNRRLQREVEEL 173
PRQ++VWFQNRR R K ++ + + R + L E+N RLQ++V L
Sbjct: 63 PRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNL 114
>UNIPROTKB|E1BAC5 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690 GO:GO:0007409
GO:GO:0050680 GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347
OMA:ERSHYPS EMBL:DAAA02052755 IPI:IPI00704604 RefSeq:NP_001179092.1
UniGene:Bt.74366 Ensembl:ENSBTAT00000017757 GeneID:539075
KEGG:bta:539075 NextBio:20877764 Uniprot:E1BAC5
Length = 237
Score = 117 (46.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 87 RKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
RKK R+ SK Q+ LE FR L+ ++E+LA L+L P QV++WFQN R + K
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLK 140
>UNIPROTKB|J9NWF1 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347 OMA:ERSHYPS
EMBL:AAEX03005678 RefSeq:XP_852202.1 Ensembl:ENSCAFT00000047066
GeneID:609776 KEGG:cfa:609776 Uniprot:J9NWF1
Length = 239
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 87 RKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
RKK R+ SK Q+ LE FR L+ ++E+LA L+L P QV++WFQN R + K
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLK 140
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 84 GPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G PR++ R ++ Q+ LE+ F NH L +++ E+A L L RQ+++WFQNRR K
Sbjct: 18 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 75
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELR 174
LK+ E +K + EQ RR + E ++++
Sbjct: 76 LKK---ELRAVKE----INEQARREREEQDKMK 101
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 68 SGSMDDEEESCINVDGGPPRKKLRLSKE---QSRLLEESFRHNHTLNPKQKEELATQLKL 124
SGS + E S + D P KK R + Q + +E F+ + KQ+++L+ +L L
Sbjct: 44 SGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNL 103
Query: 125 KPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVI 184
+P QV+ WFQN+R + K E +L+ L N R + + G PT I
Sbjct: 104 EPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAI 163
Query: 185 SPHS 188
S
Sbjct: 164 GEMS 167
>UNIPROTKB|O75364 [details] [associations]
symbol:PITX3 "Pituitary homeobox 3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030901 "midbrain
development" evidence=ISS] [GO:0002088 "lens development in
camera-type eye" evidence=ISS] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0071542 GO:GO:0043565
GO:GO:0007626 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 Orphanet:98993 GO:GO:0002089
MIM:604219 GO:GO:0070306 EMBL:AL160011 MIM:107250 Orphanet:88632
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770 CTD:5309
KO:K09357 EMBL:AF041339 EMBL:BC011642 IPI:IPI00025313
RefSeq:NP_005020.1 UniGene:Hs.137568 ProteinModelPortal:O75364
SMR:O75364 STRING:O75364 PhosphoSite:O75364 PRIDE:O75364 DNASU:5309
Ensembl:ENST00000370002 Ensembl:ENST00000539804 GeneID:5309
KEGG:hsa:5309 UCSC:uc001kuu.1 GeneCards:GC10M103979 HGNC:HGNC:9006
HPA:HPA044639 MIM:602669 MIM:610623 neXtProt:NX_O75364 Orphanet:162
PharmGKB:PA33340 InParanoid:O75364 OMA:LCKGGFA OrthoDB:EOG45QHG0
PhylomeDB:O75364 GenomeRNAi:5309 NextBio:20526 Bgee:O75364
CleanEx:HS_PITX3 CleanEx:HS_PTX3 Genevestigator:O75364
GermOnline:ENSG00000107859 Uniprot:O75364
Length = 302
Score = 119 (46.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 53/184 (28%), Positives = 77/184 (41%)
Query: 73 DEEESCINVDGGPP-----RKKLR-----LSKEQSRLLEESFRHNHTLNPKQKEELATQL 122
D E++ ++ GG P +KK R + +Q + LE +F+ N + +EE+A
Sbjct: 40 DSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT 99
Query: 123 KLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVG-- 179
L +V VWF+NRRA+ + ++ + E K GS L EE+ G
Sbjct: 100 NLTEARVRVWFKNRRAKWRKRERSQQAELCK---GSFAAPLGGLVPPYEEVYPGYSYGNW 156
Query: 180 PPTVISPHSCEPLPASTLSMCPRCERVTTTAIDK--GPTKVTTASSTP-AALSPKV--GT 234
PP ++P PL A T V A P AS P AA +P G
Sbjct: 157 PPKALAP----PLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAPGTVPGP 212
Query: 235 PALQ 238
ALQ
Sbjct: 213 GALQ 216
>UNIPROTKB|F1SHK4 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690 GO:GO:0007409
GO:GO:0050680 GeneTree:ENSGT00700000104098 KO:K09347 OMA:ERSHYPS
EMBL:CT757474 RefSeq:XP_001925375.2 Ensembl:ENSSSCT00000002176
GeneID:100155618 KEGG:ssc:100155618 Uniprot:F1SHK4
Length = 241
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 87 RKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
RKK R+ SK Q+ LE FR L+ ++E+LA L+L P QV++WFQN R + K
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLK 140
>FB|FBgn0003267 [details] [associations]
symbol:ro "rough" species:7227 "Drosophila melanogaster"
[GO:0042067 "establishment of ommatidial planar polarity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0007463 "R2/R5 cell fate commitment" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048054 "R2/R5 cell differentiation"
evidence=NAS;IMP] [GO:0001012 "RNA polymerase II regulatory region
DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0045464
"R8 cell fate specification" evidence=TAS] [GO:0045680 "negative
regulation of R8 cell differentiation" evidence=NAS] [GO:0007460
"R8 cell fate commitment" evidence=NAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0042067 GO:GO:0045464 GO:GO:0007601 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001012 KO:K09362 GeneTree:ENSGT00700000104129 EMBL:M23629
EMBL:BT022142 EMBL:X12528 PIR:A30046 PIR:S03168 RefSeq:NP_524521.1
RefSeq:NP_733173.1 UniGene:Dm.24102 ProteinModelPortal:P10181
SMR:P10181 IntAct:P10181 STRING:P10181 PRIDE:P10181
EnsemblMetazoa:FBtr0085090 EnsemblMetazoa:FBtr0085091 GeneID:43234
KEGG:dme:Dmel_CG6348 UCSC:CG6348-RA CTD:19875 FlyBase:FBgn0003267
eggNOG:NOG282802 InParanoid:P10181 OMA:VANGFMS OrthoDB:EOG4P8D17
PhylomeDB:P10181 GenomeRNAi:43234 NextBio:832866 Bgee:P10181
GermOnline:CG6348 GO:GO:0045680 GO:GO:0007463 Uniprot:P10181
Length = 350
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 82 DGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+G R++ S EQ+ LE F N ++ ++ ELA L+L Q+++WFQNRRA+ K
Sbjct: 188 EGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDK 247
Query: 142 -LKQTEMECEY 151
+++ +++ Y
Sbjct: 248 RIEKAQIDQHY 258
>RGD|1304985 [details] [associations]
symbol:Nkx2-4 "NK2 homeobox 4" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1304985 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 CTD:644524 KO:K09344 OMA:FSHSAMG
IPI:IPI00193898 RefSeq:XP_001055558.3 RefSeq:XP_345446.3
Ensembl:ENSRNOT00000016915 GeneID:366213 KEGG:rno:366213
UCSC:RGD:1304985 Uniprot:D3ZTX2
Length = 353
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 67 GSGSMD---DEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQ 121
G GS+ D +S + PR+K R+ Q+++ LE F+ L+ ++E LA+
Sbjct: 164 GMGSLTGIADAAKSLAPLHAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASM 223
Query: 122 LKLKPRQVEVWFQNRRARSKLKQTEMECEYLKR 154
+ L P QV++WFQN R + K + + + L++
Sbjct: 224 IHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQ 256
>MGI|MGI:97349 [details] [associations]
symbol:Nkx2-4 "NK2 transcription factor related, locus 4
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97349 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 CTD:644524 KO:K09344 OMA:FSHSAMG EMBL:AF202038
EMBL:AF202039 EMBL:AL928876 IPI:IPI00111298 RefSeq:NP_075993.1
UniGene:Mm.315498 ProteinModelPortal:Q9EQM3 SMR:Q9EQM3
STRING:Q9EQM3 PaxDb:Q9EQM3 PRIDE:Q9EQM3 DNASU:228731
Ensembl:ENSMUST00000067020 GeneID:228731 KEGG:mmu:228731
UCSC:uc008mss.1 InParanoid:A2ATK2 NextBio:379096 Bgee:Q9EQM3
Genevestigator:Q9EQM3 GermOnline:ENSMUSG00000054160 Uniprot:Q9EQM3
Length = 354
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 67 GSGSMD---DEEESCINVDGGPPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQ 121
G GS+ D +S + PR+K R+ Q+++ LE F+ L+ ++E LA+
Sbjct: 165 GMGSLTGIADAAKSLAPLHAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASM 224
Query: 122 LKLKPRQVEVWFQNRRARSKLKQTEMECEYLKR 154
+ L P QV++WFQN R + K + + + L++
Sbjct: 225 IHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQ 257
>FB|FBgn0014949 [details] [associations]
symbol:btn "buttonless" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P14653 EMBL:S75228 ProteinModelPortal:Q26381
FlyBase:FBgn0014949 InParanoid:Q26381 OrthoDB:EOG4RFJ98
Uniprot:Q26381
Length = 158
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK-LKQT 145
+++ SK Q + LE F +++ L ++ E+A L+L RQV+VWFQNRR + K +K
Sbjct: 88 KERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIKLE 147
Query: 146 EME 148
E +
Sbjct: 148 EQQ 150
>RGD|620520 [details] [associations]
symbol:Nkx2-5 "NK2 homeobox 5" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO;IDA] [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001570 "vasculogenesis"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0003148
"outflow tract septum morphogenesis" evidence=IEA;ISO] [GO:0003151
"outflow tract morphogenesis" evidence=ISO] [GO:0003161 "cardiac
conduction system development" evidence=ISO] [GO:0003162
"atrioventricular node development" evidence=ISO] [GO:0003166
"bundle of His development" evidence=IEA;ISO] [GO:0003168 "Purkinje
myocyte differentiation" evidence=IEA;ISO] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=ISO] [GO:0003211 "cardiac
ventricle formation" evidence=IEA;ISO] [GO:0003221 "right
ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA;ISO] [GO:0003278 "apoptotic process involved in heart
morphogenesis" evidence=IEA;ISO] [GO:0003285 "septum secundum
development" evidence=IEA;ISO] [GO:0003342 "proepicardium
development" evidence=IEA;ISO] [GO:0003350 "pulmonary myocardium
development" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007507 "heart development" evidence=ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0010667 "negative
regulation of cardiac muscle cell apoptotic process"
evidence=IEA;ISO] [GO:0010735 "positive regulation of transcription
via serum response element binding" evidence=IEA;ISO] [GO:0010736
"serum response element binding" evidence=IEA;ISO] [GO:0010765
"positive regulation of sodium ion transport" evidence=IEA;ISO]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA;ISO] [GO:0030097 "hemopoiesis" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030509 "BMP
signaling pathway" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0032355 "response to estradiol
stimulus" evidence=IEP] [GO:0035050 "embryonic heart tube
development" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO;IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO;IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045214 "sarcomere
organization" evidence=IEA;ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA;ISO] [GO:0045823 "positive
regulation of heart contraction" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051891 "positive
regulation of cardioblast differentiation" evidence=IEA;ISO]
[GO:0055005 "ventricular cardiac myofibril development"
evidence=IEA;ISO] [GO:0055007 "cardiac muscle cell differentiation"
evidence=IEP;ISO] [GO:0055008 "cardiac muscle tissue morphogenesis"
evidence=ISO] [GO:0055117 "regulation of cardiac muscle
contraction" evidence=IEA;ISO] [GO:0060037 "pharyngeal system
development" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060043 "regulation of cardiac
muscle cell proliferation" evidence=IEA;ISO] [GO:0060047 "heart
contraction" evidence=ISO] [GO:0060048 "cardiac muscle contraction"
evidence=IEA;ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA;ISO] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0060347 "heart trabecula formation"
evidence=IEA;ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA;ISO] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA;ISO] [GO:0060928 "atrioventricular node cell
development" evidence=IEA;ISO] [GO:0060929 "atrioventricular node
cell fate commitment" evidence=IEA;ISO] [GO:0060971 "embryonic
heart tube left/right pattern formation" evidence=IEA;ISO]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0072358 "cardiovascular system development"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901387 "positive
regulation of voltage-gated calcium channel activity"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620520 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0071363 GO:GO:0032355 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0055007 GO:GO:0060048 GO:GO:0045214
GO:GO:0030509 GO:GO:0060037 GO:GO:0007512 GO:GO:0045666
GO:GO:0030097 GO:GO:0001570 GO:GO:0001190 GO:GO:0010765
GO:GO:0090090 GO:GO:0001947 GO:GO:0060070 GO:GO:0045823
GO:GO:0060347 GO:GO:0010832 GO:GO:0055117 GO:GO:0001104
GO:GO:0060413 GO:GO:0060971 GO:GO:0060412 GO:GO:0003278
GO:GO:0003222 GO:GO:0030878 GO:GO:0003148 GO:GO:0060043
GO:GO:0003221 GO:GO:0051891 GO:GO:0060261 GO:GO:0010667
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0003166
HOVERGEN:HBG006689 GO:GO:0060928 GO:GO:0055005 GO:GO:0003211
CTD:1482 KO:K09345 OrthoDB:EOG4K0QP6 GO:GO:0010736 GO:GO:0060929
GO:GO:0010735 GO:GO:0003342 GO:GO:0003350 GO:GO:0003168
GO:GO:0003285 EMBL:AF006664 IPI:IPI00212325 RefSeq:NP_446103.1
UniGene:Rn.6179 ProteinModelPortal:O35767 SMR:O35767 STRING:O35767
PRIDE:O35767 GeneID:114109 KEGG:rno:114109 UCSC:RGD:620520
InParanoid:O35767 NextBio:618293 Genevestigator:O35767
GermOnline:ENSRNOG00000020747 Uniprot:O35767
Length = 318
Score = 119 (46.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 87 RKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
R+K R+ Q+++ LE F+ L+P ++++LA+ LKL QV++WFQNRR + K ++
Sbjct: 137 RRKPRVLFSQAQVYELERRFKQQRYLSPAERDQLASVLKLTSTQVKIWFQNRRYKCKRQR 196
Query: 145 TEMECEYL 152
+ E L
Sbjct: 197 QDQTLELL 204
>ZFIN|ZDB-GENE-050417-97 [details] [associations]
symbol:dmbx1b "diencephalon/mesencephalon homeobox
1b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0050767 "regulation of neurogenesis"
evidence=IGI;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050417-97 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041
GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OrthoDB:EOG4BCDNN EMBL:DQ317638 EMBL:BC093284 IPI:IPI00487260
RefSeq:NP_001017625.1 UniGene:Dr.91498 ProteinModelPortal:Q566X8
SMR:Q566X8 Ensembl:ENSDART00000026693 GeneID:550288 KEGG:dre:550288
CTD:550288 InParanoid:Q566X8 OMA:EDNADRE NextBio:20879549
Bgee:Q566X8 Uniprot:Q566X8
Length = 369
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R + + +Q LE++F+ H + +E LA L +V+VWF+NRRA+ + KQ
Sbjct: 68 RSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRS 127
Query: 147 MECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCE 204
++ E L+R + TE Q E +E + P +P S PL L+ P CE
Sbjct: 128 LQKEQLQRLKEAGTEG---AQDEGKE----EAPPVEAQAPPS--PLDGRGLTSAPSCE 176
>UNIPROTKB|P43699 [details] [associations]
symbol:NKX2-1 "Homeobox protein Nkx-2.1" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006644 "phospholipid metabolic process"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021795 "cerebral cortex cell migration"
evidence=IEA] [GO:0021798 "forebrain dorsal/ventral pattern
formation" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021892 "cerebral cortex GABAergic
interneuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031128 "developmental
induction" evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0042696 "menarche" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0060430 "lung saccule development" evidence=IEA]
[GO:0060486 "Clara cell differentiation" evidence=IEA] [GO:0060510
"Type II pneumocyte differentiation" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0010719
"negative regulation of epithelial to mesenchymal transition"
evidence=IDA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEP] [GO:0030324 "lung development" evidence=IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEP]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IEP;IMP] [GO:0021759 "globus pallidus
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030336 "negative regulation of cell migration"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0030900 "forebrain development" evidence=IEP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0021766 GO:GO:0001764 GO:GO:0005654
GO:GO:0033327 GO:GO:0045471 GO:GO:0007631 GO:GO:0043565
GO:GO:0032496 GO:GO:0006644 GO:GO:0045944 GO:GO:0007626
GO:GO:0003700 Pathway_Interaction_DB:hnf3bpathway Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
EMBL:CH471078 GO:GO:0009725 GO:GO:0046545 GO:GO:0060510
GO:GO:0021983 GO:GO:0007492 GO:GO:0021877 GO:GO:0048709
GO:GO:0042538 GO:GO:0021759 GO:GO:0021892 GO:GO:0030512
GO:GO:0060441 GO:GO:0010719 Orphanet:146 GO:GO:0021795
GO:GO:0002016 GO:GO:0030878 GO:GO:0060430 GO:GO:0021798
Orphanet:95713 Orphanet:95720 GO:GO:0060486 eggNOG:NOG328614
HOGENOM:HOG000231923 HOVERGEN:HBG006689 EMBL:U19756 EMBL:X82850
EMBL:U19816 EMBL:U33749 EMBL:U43203 EMBL:D50739 EMBL:D50740
EMBL:BT009773 EMBL:AL132857 EMBL:BC006221 IPI:IPI00472988
IPI:IPI00816620 PIR:G02321 RefSeq:NP_001073136.1 RefSeq:NP_003308.1
UniGene:Hs.94367 ProteinModelPortal:P43699 SMR:P43699 IntAct:P43699
MINT:MINT-192847 STRING:P43699 PhosphoSite:P43699 DMDM:1174819
PRIDE:P43699 DNASU:7080 Ensembl:ENST00000354822
Ensembl:ENST00000498187 Ensembl:ENST00000518149
Ensembl:ENST00000522719 GeneID:7080 KEGG:hsa:7080 UCSC:uc001wtt.3
UCSC:uc001wtu.3 CTD:7080 GeneCards:GC14M036985 HGNC:HGNC:11825
HPA:CAB000078 MIM:118700 MIM:600635 MIM:610978 neXtProt:NX_P43699
Orphanet:1429 Orphanet:209905 PharmGKB:PA36531 InParanoid:P43699
KO:K09342 OMA:MRNSASA OrthoDB:EOG4V9TSG GenomeRNAi:7080
NextBio:27693 ArrayExpress:P43699 Bgee:P43699 CleanEx:HS_NKX2-1
CleanEx:HS_TTF1 Genevestigator:P43699 GermOnline:ENSG00000136352
GO:GO:0031128 GO:GO:0042696 Uniprot:P43699
Length = 371
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQNRRARSK 141
P QV++WFQN R + K
Sbjct: 202 PTQVKIWFQNHRYKMK 217
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 100 (40.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 83 GGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G R++ + EQ LE+ F L+ ++ ++A LKL QV++WFQNRRA+ K
Sbjct: 22 GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 80
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 100 (40.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+K+ +K Q+ LE+ F N L ++ E+A L L RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|Q90789 [details] [associations]
symbol:Cnot "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0030903 "notochord development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099625 HOVERGEN:HBG016849 OrthoDB:EOG48GW4Q
HSSP:P14653 eggNOG:NOG249605 EMBL:AADN02049007 EMBL:X82575
IPI:IPI00679844 PIR:I50622 UniGene:Gga.677
Ensembl:ENSGALT00000037091 HOGENOM:HOG000202447 InParanoid:Q90789
Uniprot:Q90789
Length = 111
Score = 100 (40.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 83 GGPPR-KKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR 139
GGP + K++R EQ LE+ F + ++ +LA L+L QV+VWFQNRR +
Sbjct: 11 GGPCKMKRVRTVFKPEQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIK 70
Query: 140 SKLKQTEMECEYLKRWFG 157
+ + E + L + FG
Sbjct: 71 WRKQSMEQKKAKLSQ-FG 87
>MGI|MGI:108067 [details] [associations]
symbol:Nkx2-1 "NK2 homeobox 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0002016 "regulation of blood volume by
renin-angiotensin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006644 "phospholipid metabolic process"
evidence=IGI] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007420
"brain development" evidence=ISO;IGI;IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=ISO;IMP] [GO:0007631 "feeding behavior" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=ISO] [GO:0010719
"negative regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0021537 "telencephalon development" evidence=IMP]
[GO:0021759 "globus pallidus development" evidence=ISO;IMP]
[GO:0021766 "hippocampus development" evidence=IMP] [GO:0021795
"cerebral cortex cell migration" evidence=IMP] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IMP]
[GO:0021877 "forebrain neuron fate commitment" evidence=IGI;IMP]
[GO:0021879 "forebrain neuron differentiation" evidence=IMP]
[GO:0021892 "cerebral cortex GABAergic interneuron differentiation"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IGI;IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0022029 "telencephalon cell migration"
evidence=IMP] [GO:0030324 "lung development" evidence=IGI;ISO;IMP]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0030878 "thyroid
gland development" evidence=IGI;ISO;IMP] [GO:0031128 "developmental
induction" evidence=IMP] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0033327 "Leydig cell
differentiation" evidence=IMP] [GO:0042538 "hyperosmotic salinity
response" evidence=ISO] [GO:0042696 "menarche" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IGI;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IMP] [GO:0048663
"neuron fate commitment" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IGI] [GO:0060430 "lung saccule
development" evidence=IGI] [GO:0060486 "Clara cell differentiation"
evidence=IGI] [GO:0060510 "Type II pneumocyte differentiation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:108067 GO:GO:0007411 GO:GO:0021766
GO:GO:0001764 GO:GO:0033327 GO:GO:0045471 GO:GO:0007631
GO:GO:0043565 GO:GO:0032496 GO:GO:0006644 GO:GO:0045944
GO:GO:0007626 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
GO:GO:0030336 GO:GO:0044212 GO:GO:0009887 GO:GO:0009725
GO:GO:0046545 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0042538 GO:GO:0021759
GO:GO:0021892 GO:GO:0030512 GO:GO:0060441 GO:GO:0010719
GO:GO:0021795 GO:GO:0002016 GO:GO:0030878 GO:GO:0060430
GO:GO:0021798 GO:GO:0060486 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 CTD:7080 KO:K09342 OMA:MRNSASA GO:GO:0031128
GO:GO:0042696 EMBL:U19755 EMBL:BC080868 IPI:IPI00116260 PIR:S53724
RefSeq:NP_001139670.1 RefSeq:NP_033411.3 UniGene:Mm.89972
ProteinModelPortal:P50220 SMR:P50220 STRING:P50220
PhosphoSite:P50220 PRIDE:P50220 Ensembl:ENSMUST00000001536
Ensembl:ENSMUST00000178477 GeneID:21869 KEGG:mmu:21869
UCSC:uc007npf.2 InParanoid:P50220 OrthoDB:EOG4X6CB3 NextBio:301368
Bgee:P50220 CleanEx:MM_NKX2-1 CleanEx:MM_TTF1 Genevestigator:P50220
GermOnline:ENSMUSG00000001496 Uniprot:P50220
Length = 372
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQNRRARSK 141
P QV++WFQN R + K
Sbjct: 202 PTQVKIWFQNHRYKMK 217
>RGD|3866 [details] [associations]
symbol:Nkx2-1 "NK2 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0002016 "regulation of blood volume by
renin-angiotensin" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP;TAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006644 "phospholipid metabolic process"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007420 "brain development" evidence=ISO] [GO:0007492 "endoderm
development" evidence=IEA;ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0007631 "feeding behavior" evidence=IMP]
[GO:0009725 "response to hormone stimulus" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0010719 "negative
regulation of epithelial to mesenchymal transition" evidence=IEA;ISO]
[GO:0021537 "telencephalon development" evidence=ISO] [GO:0021759
"globus pallidus development" evidence=IEA;ISO] [GO:0021766
"hippocampus development" evidence=IEA;ISO] [GO:0021795 "cerebral
cortex cell migration" evidence=IEA;ISO] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0021877
"forebrain neuron fate commitment" evidence=IEA;ISO] [GO:0021879
"forebrain neuron differentiation" evidence=ISO] [GO:0021892
"cerebral cortex GABAergic interneuron differentiation"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0022029 "telencephalon cell
migration" evidence=ISO] [GO:0030324 "lung development" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=IEA;ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030878 "thyroid
gland development" evidence=IEA;ISO] [GO:0030900 "forebrain
development" evidence=ISO] [GO:0031128 "developmental induction"
evidence=IEA;ISO] [GO:0032496 "response to lipopolysaccharide"
evidence=IDA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA;ISO] [GO:0042538 "hyperosmotic salinity response"
evidence=IDA] [GO:0042696 "menarche" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA;ISO]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO;IDA] [GO:0046545 "development of
primary female sexual characteristics" evidence=IEP] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:0048663 "neuron fate commitment" evidence=ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA;ISO]
[GO:0060430 "lung saccule development" evidence=IEA;ISO] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEA;ISO] [GO:0060486 "Clara cell differentiation"
evidence=IEA;ISO] [GO:0060510 "Type II pneumocyte differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:3866 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0005654 GO:GO:0033327 GO:GO:0045471 GO:GO:0007631 GO:GO:0043565
GO:GO:0032496 GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0046545 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0042538 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795 GO:GO:0002016
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 OrthoDB:EOG4X6CB3 EMBL:X53858 EMBL:D38035
IPI:IPI00554071 PIR:S12002 UniGene:Rn.34265 PDB:1FTT PDBsum:1FTT
DisProt:DP00071 ProteinModelPortal:P23441 SMR:P23441 IntAct:P23441
MINT:MINT-125247 STRING:P23441 PhosphoSite:P23441 UCSC:RGD:3866
InParanoid:P23441 EvolutionaryTrace:P23441 Genevestigator:P23441
GermOnline:ENSRNOG00000008644 Uniprot:P23441
Length = 372
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL-SKEQSRLLEESFRHNHTLNPKQKEELATQLKLK 125
G GS+ D ++ + P RK+ L S+ Q LE F+ L+ ++E LA+ + L
Sbjct: 142 GLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 201
Query: 126 PRQVEVWFQNRRARSK 141
P QV++WFQN R + K
Sbjct: 202 PTQVKIWFQNHRYKMK 217
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 37/102 (36%), Positives = 58/102 (56%)
Query: 75 EESCINVDG-GPPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEV 131
+ES DG G ++LR + ++LLE + F N L ++ E+A L L RQV+V
Sbjct: 128 KESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKV 187
Query: 132 WFQNRRARSKLKQTEM-ECEYLKRWFGSLTEQNRRLQREVEE 172
WFQNRR + K +QT+ E + + F SL E + +++ + EE
Sbjct: 188 WFQNRRMKHK-RQTQCKENQNSEGKFKSL-EDSEKVEEDEEE 227
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 120 (47.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 37/102 (36%), Positives = 58/102 (56%)
Query: 75 EESCINVDG-GPPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEV 131
+ES DG G ++LR + ++LLE + F N L ++ E+A L L RQV+V
Sbjct: 134 KESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKV 193
Query: 132 WFQNRRARSKLKQTEM-ECEYLKRWFGSLTEQNRRLQREVEE 172
WFQNRR + K +QT+ E + + F SL E + +++ + EE
Sbjct: 194 WFQNRRMKHK-RQTQCKENQNSEGKFKSL-EDSEKVEEDEEE 233
>ZFIN|ZDB-GENE-000823-5 [details] [associations]
symbol:hoxa1a "homeo box A1a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-000823-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 eggNOG:NOG236971 KO:K09301
EMBL:AJ306430 EMBL:AJ306431 EMBL:AF071243 EMBL:AL645756
EMBL:CR382300 EMBL:DQ060531 IPI:IPI00494329 IPI:IPI00494805
RefSeq:NP_571611.1 UniGene:Dr.83046 ProteinModelPortal:Q98SI1
SMR:Q98SI1 STRING:Q98SI1 Ensembl:ENSDART00000080456
Ensembl:ENSDART00000080461 GeneID:58051 KEGG:dre:58051 CTD:58051
HOGENOM:HOG000247020 HOVERGEN:HBG006089 InParanoid:Q98SI1
OMA:RAYPSDH OrthoDB:EOG47H5QN NextBio:20892315 ArrayExpress:Q98SI1
Bgee:Q98SI1 Uniprot:Q98SI1
Length = 329
Score = 119 (46.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 83 GGPPRK-KLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
GG P + S +Q LE+ F N L ++ E+A L+L QV++WFQNRR + K
Sbjct: 222 GGQPNTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQK 281
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISP 186
++ E L + SL+EQ L++ E+ P+ SP
Sbjct: 282 KREKE---GLLPK---SLSEQKDGLEK-TEDASEKSPSAPSTPSP 319
>FB|FBgn0004606 [details] [associations]
symbol:zfh1 "Zn finger homeodomain 1" species:7227
"Drosophila melanogaster" [GO:0007399 "nervous system development"
evidence=IEP] [GO:0007498 "mesoderm development"
evidence=IGI;IEP;NAS] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0008406 "gonad development"
evidence=TAS] [GO:0007280 "pole cell migration" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0007507 "heart development" evidence=NAS] [GO:0007517 "muscle
organ development" evidence=NAS] [GO:0007417 "central nervous
system development" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0048542 "lymph gland development" evidence=IMP]
[GO:0061321 "garland nephrocyte differentiation" evidence=IMP]
[GO:0048103 "somatic stem cell division" evidence=IMP] [GO:0007516
"hemocyte development" evidence=IMP] InterPro:IPR001356
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0007280
GO:GO:0007507 GO:GO:0008406 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0008045 eggNOG:COG5048 Gene3D:3.30.160.60
GO:GO:0019730 GO:GO:0048542 GO:GO:0000977 GO:GO:0048103
GO:GO:0007516 GeneTree:ENSGT00630000089829 KO:K09299 EMBL:M63449
EMBL:BT003277 EMBL:BT011080 EMBL:AY118654 PIR:S33641
RefSeq:NP_476850.1 RefSeq:NP_733402.1 UniGene:Dm.4708
ProteinModelPortal:P28166 SMR:P28166 IntAct:P28166 MINT:MINT-94472
STRING:P28166 PaxDb:P28166 EnsemblMetazoa:FBtr0085701 GeneID:43650
KEGG:dme:Dmel_CG1322 CTD:43650 FlyBase:FBgn0004606
InParanoid:P28166 OMA:FLPFSCQ OrthoDB:EOG4W6MB8 PhylomeDB:P28166
GenomeRNAi:43650 NextBio:835065 Bgee:P28166 GermOnline:CG1322
GO:GO:0061321 Uniprot:P28166
Length = 1054
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 68 SGSMDDEEESCINVDGGPPR----KKLRLSKEQSRLLEESFRHNHTLNPK-QKEE---LA 119
S S +DEE+ ++V+ P + +K+R+ + ++ + +++LN + ++E +A
Sbjct: 674 SASEEDEEDEEMDVEEEPRQESGERKVRVRTAINEEQQQQLKQHYSLNARPSRDEFRMIA 733
Query: 120 TQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG 179
+L+L PR V+VWFQN R+R + Q+ + + L RE + L
Sbjct: 734 ARLQLDPRVVQVWFQNNRSRERKMQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKR 793
Query: 180 PPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSP 230
P S P A P E + AI+ T+AS +PA++SP
Sbjct: 794 DPLTPKSESSPPYIAP-----PSGEALNPEAINLSRKFSTSASMSPASISP 839
>UNIPROTKB|F1NR49 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI01017154
Ensembl:ENSGALT00000040979 Uniprot:F1NR49
Length = 156
Score = 108 (43.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 85 PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
P R+K R+ Q+++LE F+ L+ ++E LA L+L QV++WFQNRR + K
Sbjct: 25 PQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQNRRYKCKR 84
Query: 143 KQTEMECE 150
++ + E
Sbjct: 85 QRQDRSLE 92
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 113 (44.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 77 SCIN--VDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWF 133
S +N +GG P R + +++Q LE+ F N L +++ E+A L L RQV++WF
Sbjct: 73 SAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 132
Query: 134 QNRRAR----SKLKQTEM 147
QNRR + KL T+M
Sbjct: 133 QNRRMKWKKDHKLPNTKM 150
>MGI|MGI:97352 [details] [associations]
symbol:Nkx3-1 "NK-3 transcription factor, locus 1
(Drosophila)" species:10090 "Mus musculus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=TAS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0004882
"androgen receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007431 "salivary gland development" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=ISO;IDA;IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IGI] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0030284
"estrogen receptor activity" evidence=ISO] [GO:0030295 "protein
kinase activator activity" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0030850 "prostate gland
development" evidence=TAS] [GO:0033574 "response to testosterone
stimulus" evidence=IMP] [GO:0035260 "internal genitalia
morphogenesis" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0043569 "negative regulation of insulin-like
growth factor receptor signaling pathway" evidence=IDA] [GO:0043621
"protein self-association" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045860 "positive
regulation of protein kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=ISO] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IMP] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IMP]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071850 "mitotic cell cycle arrest" evidence=ISO]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=ISO] [GO:0097162 "MADS box domain binding" evidence=IDA]
[GO:2000836 "positive regulation of androgen secretion"
evidence=ISO] [GO:2001022 "positive regulation of response to DNA
damage stimulus" evidence=ISO] [GO:2001235 "positive regulation of
apoptotic signaling pathway" evidence=ISO] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97352 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0008134 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0030331
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:0045930 GO:GO:2001022 GO:GO:0060442
GO:GO:0071850 GO:GO:0000988 GO:GO:0030284 GO:GO:0060664
HOGENOM:HOG000231923 HOVERGEN:HBG006689 KO:K09348 GO:GO:0071899
CTD:4824 eggNOG:NOG238786 OMA:TEPERHL OrthoDB:EOG46Q6TS
GO:GO:0035907 GO:GO:2000836 EMBL:U73460 EMBL:U88542 IPI:IPI00125359
RefSeq:NP_035051.1 UniGene:Mm.3520 ProteinModelPortal:P97436
SMR:P97436 STRING:P97436 PhosphoSite:P97436 PRIDE:P97436
Ensembl:ENSMUST00000022646 GeneID:18095 KEGG:mmu:18095
InParanoid:P97436 NextBio:293247 Bgee:P97436 CleanEx:MM_NKX3-1
Genevestigator:P97436 GermOnline:ENSMUSG00000022061 GO:GO:0097162
GO:GO:0035260 Uniprot:P97436
Length = 237
Score = 116 (45.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 124 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 183
Query: 144 QTEMECEYLKR 154
Q + L++
Sbjct: 184 QLSEDLGVLEK 194
>UNIPROTKB|Q9PU20 [details] [associations]
symbol:vax2-a "Ventral anterior homeobox 2a" species:8355
"Xenopus laevis" [GO:0030900 "forebrain development" evidence=ISS]
[GO:0060322 "head development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060322
HOVERGEN:HBG007558 KO:K09318 EMBL:AJ238649 RefSeq:NP_001081712.1
UniGene:Xl.224 ProteinModelPortal:Q9PU20 GeneID:398011
KEGG:xla:398011 CTD:398011 Xenbase:XB-GENE-492927 Uniprot:Q9PU20
Length = 302
Score = 118 (46.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + + EQ LE F+ + +++ ELA QL L QV+VWFQNRR + K Q
Sbjct: 105 PKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ 164
Query: 145 TEMECEYLKRWFGSLTEQ--NRRLQREVEELRAMKV-GPPTVIS 185
+ + E KR S +E + R +E+ R + V PP +IS
Sbjct: 165 SR-DSE--KR-SSSTSESFATCNILRLLEQGRLLSVPAPPNLIS 204
>WB|WBGene00001174 [details] [associations]
symbol:egl-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0018991 "oviposition" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0030155 "regulation of cell adhesion" evidence=IMP] [GO:0045138
"tail tip morphogenesis" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0018991 GO:GO:0030155
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09300
GO:GO:0000122 GO:GO:0030163 GO:GO:0045138 EMBL:L19247 EMBL:FO080429
EMBL:X17075 PIR:A40722 PIR:S44613 RefSeq:NP_001021166.1
RefSeq:NP_001021167.1 RefSeq:NP_498697.3 UniGene:Cel.19646
ProteinModelPortal:P17486 SMR:P17486 STRING:P17486
EnsemblMetazoa:C08C3.1b GeneID:176093 KEGG:cel:CELE_C08C3.1
UCSC:C08C3.1b CTD:176093 WormBase:C08C3.1a WormBase:C08C3.1b
WormBase:C08C3.1c eggNOG:NOG323773 GeneTree:ENSGT00700000104189
HOGENOM:HOG000015889 InParanoid:P17486 OMA:KFQQSSY NextBio:891082
Uniprot:P17486
Length = 223
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 96 QSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEME 148
Q+ +LE F+ + ++ KQ+EEL Q +L RQ+++WFQNRR ++K ++ ++
Sbjct: 123 QTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQRVD 175
>ZFIN|ZDB-GENE-030813-1 [details] [associations]
symbol:ved "ventrally expressed dharma/bozozok
antagonist" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IGI] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI;IDA] [GO:0042661 "regulation of mesodermal cell fate
specification" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060061 "Spemann organizer formation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030813-1 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
HSSP:P02836 GO:GO:0036342 GO:GO:0042661 GO:GO:0060061
eggNOG:NOG246006 GeneTree:ENSGT00610000086217 EMBL:CU633882
EMBL:BC162293 EMBL:BC162308 EMBL:AB082517 IPI:IPI00997883
RefSeq:NP_898897.1 UniGene:Dr.88295 STRING:Q8AV71
Ensembl:ENSDART00000151832 GeneID:368201 KEGG:dre:368201 CTD:368201
HOGENOM:HOG000205900 HOVERGEN:HBG094227 InParanoid:Q8AV71
OMA:SIEWMAQ OrthoDB:EOG4VQ9QK NextBio:20812804 Uniprot:Q8AV71
Length = 278
Score = 117 (46.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/102 (34%), Positives = 44/102 (43%)
Query: 50 SEDTEXXXXXXXXXXXXGSGSMDDEEESCI---NVDGGPP---RKKLRLSKEQSRLLEES 103
+ED E GSGS + + G P R + S EQ LE
Sbjct: 99 TEDEELSGCESEGSRSEGSGSRSPAAPGSVAPASGSGSPSSGRRPRTAFSSEQISSLERV 158
Query: 104 FRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQT 145
F+ N L + K EL LKL +Q+ WFQNRR KLK+T
Sbjct: 159 FKRNAYLGAQDKAELCRTLKLTDKQIRNWFQNRRM--KLKRT 198
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 99 (39.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 85 PPRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
P RKK R S + ++ LE+ F L ++ LA LK+ QV+ WFQNRR + +
Sbjct: 9 PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWR- 67
Query: 143 KQTEMECE 150
+QT E E
Sbjct: 68 RQTAEERE 75
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 99 (39.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRAR 139
R + ++EQ + LE F N + +E LA ++ LK +VEVWF+NRRA+
Sbjct: 3 RHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAK 55
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 99 (39.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 88 KKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+++ S+ Q LE F+ L+ ++E LA+ + L P QV++WFQN R + K
Sbjct: 4 RRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMK 57
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 116 (45.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 155 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 214
Query: 139 RSK 141
+ K
Sbjct: 215 KWK 217
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 116 (45.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 155 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 214
Query: 139 RSK 141
+ K
Sbjct: 215 KWK 217
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 156 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 215
Query: 139 RSK 141
+ K
Sbjct: 216 KWK 218
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 156 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 215
Query: 139 RSK 141
+ K
Sbjct: 216 KWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 156 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 215
Query: 139 RSK 141
+ K
Sbjct: 216 KWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 156 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 215
Query: 139 RSK 141
+ K
Sbjct: 216 KWK 218
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F +N L +++ E+A L L RQ+++WFQNRR
Sbjct: 156 NYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 215
Query: 139 RSK 141
+ K
Sbjct: 216 KWK 218
>UNIPROTKB|Q9W769 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0030509 "BMP signaling
pathway" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048264
"determination of ventral identity" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0030509 GO:GO:0048264 HSSP:P02836 EMBL:AF149307
RefSeq:NP_001081954.1 UniGene:Xl.558 ProteinModelPortal:Q9W769
GeneID:398140 KEGG:xla:398140 CTD:398140 Xenbase:XB-GENE-864941
HOVERGEN:HBG094147 Uniprot:Q9W769
Length = 285
Score = 117 (46.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTE 146
R + + S EQ LE SF+ N + +K L+ LKL Q++ WFQNRR + K +QT+
Sbjct: 133 RARTKFSPEQLEELERSFKENRYIGSSEKRRLSKVLKLSETQIKTWFQNRRMKFK-RQTQ 191
>UNIPROTKB|F1NU45 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI00582020
Ensembl:ENSGALT00000000497 OMA:SYGVGYT Uniprot:F1NU45
Length = 159
Score = 108 (43.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 85 PPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKL 142
P R+K R+ Q+++LE F+ L+ ++E LA L+L QV++WFQNRR + K
Sbjct: 28 PQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQNRRYKCKR 87
Query: 143 KQTEMECE 150
++ + E
Sbjct: 88 QRQDRSLE 95
>MGI|MGI:1270158 [details] [associations]
symbol:Nkx2-9 "NK2 transcription factor related, locus 9
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0030323 "respiratory tube development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1270158 GO:GO:0005634 GO:GO:0030324
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007409 GO:GO:0050680
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:Y15741 IPI:IPI00119496 UniGene:Mm.129420
ProteinModelPortal:O70584 SMR:O70584 STRING:O70584 PRIDE:O70584
InParanoid:O70584 Genevestigator:O70584
GermOnline:ENSMUSG00000058669 Uniprot:O70584
Length = 235
Score = 115 (45.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 83 GGPP--RKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
G P R+K R+ SK Q+ LE FR L+ ++E+LA L+L P QV++WFQN R
Sbjct: 75 GSDPEKRRKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRY 134
Query: 139 RSK 141
+ K
Sbjct: 135 KLK 137
>UNIPROTKB|P24343 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GeneTree:ENSGT00700000104263 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:X62019 EMBL:D10289
IPI:IPI00598647 PIR:A45186 PIR:C37914 PIR:S14800 RefSeq:NP_990580.1
UniGene:Gga.695 ProteinModelPortal:P24343 IntAct:P24343
STRING:P24343 Ensembl:ENSGALT00000015086 GeneID:396178
KEGG:gga:396178 CTD:3238 eggNOG:NOG241833 InParanoid:P24343
OMA:PDGLPWG OrthoDB:EOG43N7DG NextBio:20816232 Uniprot:P24343
Length = 266
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 196 GRSRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 254
>UNIPROTKB|H9L0A6 [details] [associations]
symbol:HOXC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 CTD:3227 OMA:EEHTNSG EMBL:AADN02039879
RefSeq:XP_428250.2 Ensembl:ENSGALT00000022365 GeneID:430698
KEGG:gga:430698 Uniprot:H9L0A6
Length = 300
Score = 117 (46.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 31/91 (34%), Positives = 42/91 (46%)
Query: 52 DTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKK-LRLSKEQSRLLEESFRHNHTL 110
D E S S++ E N RKK SK Q R LE F N +
Sbjct: 194 DPEDEEENTTPGSSASSSSVNKEGSKSSNSSAPRTRKKRCPYSKFQIRELEREFFFNVYI 253
Query: 111 NPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
N +++ +L+ L L RQV++WFQNRR + K
Sbjct: 254 NKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 284
>UNIPROTKB|E1BIE8 [details] [associations]
symbol:LOC527892 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060039
"pericardium development" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0055014 "atrial cardiac
muscle cell development" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0043586 "tongue development"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060037 GO:GO:0048565 GO:GO:0055015 GO:GO:0021854
GO:GO:0060039 GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 OMA:SEQPKAR EMBL:DAAA02023595
IPI:IPI00903703 Ensembl:ENSBTAT00000018610 Uniprot:E1BIE8
Length = 300
Score = 117 (46.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/131 (29%), Positives = 58/131 (44%)
Query: 67 GSGSMDDEEESCINVDGGPPRKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKL 124
G G+ D E I PR+K R+ S+ Q LE F+ L+ ++E LA+ L+L
Sbjct: 117 GGGARGDGAEHPI----ARPRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQL 172
Query: 125 KPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVI 184
QV++WFQNRR + K ++ + E L R+ + + GPP
Sbjct: 173 TSTQVKIWFQNRRYKCKRQRQDKSLELAGHPLAPRRVAVPVLVRDGKP--CLGPGPPAFP 230
Query: 185 SPHSCEPLPAS 195
P+ P S
Sbjct: 231 GPYGAAAAPYS 241
>MGI|MGI:96204 [details] [associations]
symbol:Hoxd12 "homeobox D12" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96204 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH466519 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501
GO:GO:0007389 GO:GO:0042733 GeneTree:ENSGT00700000104263
HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG EMBL:X58849
EMBL:AK031206 EMBL:AL928644 EMBL:BC145656 IPI:IPI00136959
PIR:S16317 RefSeq:NP_032300.2 UniGene:Mm.57124
ProteinModelPortal:P23812 SMR:P23812 IntAct:P23812 STRING:P23812
PhosphoSite:P23812 PRIDE:P23812 Ensembl:ENSMUST00000001878
GeneID:15432 KEGG:mmu:15432 UCSC:uc008kdv.1 InParanoid:Q8BSN0
NextBio:288198 Bgee:P23812 CleanEx:MM_HOXD12 Genevestigator:P23812
GermOnline:ENSMUSG00000001823 Uniprot:P23812
Length = 268
Score = 116 (45.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 198 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 256
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 107 (42.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 95 EQSRL-LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARS-KLKQTEME 148
+ RL LE+ F ++ + ++K ELA L L RQV++WFQNRRA+ K+ + +++
Sbjct: 38 DHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQ 93
>UNIPROTKB|F6XRF4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
Ensembl:ENSCAFT00000021306 EMBL:AAEX03017786 RefSeq:XP_545535.1
GeneID:488413 KEGG:cfa:488413 Uniprot:F6XRF4
Length = 270
Score = 116 (45.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 200 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>UNIPROTKB|P35452 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 EMBL:CH471058 GO:GO:0007389
GO:GO:0042733 GO:GO:0000228 EMBL:AC009336 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:AF154915 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG IPI:IPI00784701
PIR:C39065 RefSeq:NP_067016.3 UniGene:Hs.450028
ProteinModelPortal:P35452 SMR:P35452 STRING:P35452
PhosphoSite:P35452 DMDM:259016345 PRIDE:P35452
Ensembl:ENST00000406506 GeneID:3238 KEGG:hsa:3238 UCSC:uc010zev.1
GeneCards:GC02P176930 H-InvDB:HIX0029976 HGNC:HGNC:5135 MIM:142988
neXtProt:NX_P35452 PharmGKB:PA29409 InParanoid:P35452
GenomeRNAi:3238 NextBio:12887 ArrayExpress:P35452 CleanEx:HS_HOXD12
Genevestigator:P35452 GermOnline:ENSG00000170178 Uniprot:P35452
Length = 270
Score = 116 (45.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 200 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>UNIPROTKB|F1RZG4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
EMBL:CU570829 RefSeq:XP_003483729.1 UniGene:Ssc.74532
Ensembl:ENSSSCT00000017401 GeneID:100158034 KEGG:ssc:100158034
Uniprot:F1RZG4
Length = 270
Score = 116 (45.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 200 GRARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>UNIPROTKB|E1BE99 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 OMA:PDGLPWG EMBL:DAAA02004174
IPI:IPI00692097 Ensembl:ENSBTAT00000005652 Uniprot:E1BE99
Length = 271
Score = 116 (45.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 201 GRARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 259
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 84 GPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G PR++ R ++ Q+ LE+ F NH L +++ E+A L L RQ+++WFQNRR K
Sbjct: 135 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 192
Query: 142 LKQTEMECEYLKRWFGSLTEQNRRLQREVEELR 174
LK+ E +K + EQ RR + E ++++
Sbjct: 193 LKK---ELRAVKE----INEQARREREEQDKMK 218
>WB|WBGene00003939 [details] [associations]
symbol:pax-3 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0031581 "hemidesmosome
assembly" evidence=IGI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035
GO:GO:0031581 EMBL:Z48783 HSSP:P06601 EMBL:Z48582
GeneTree:ENSGT00680000099553 PIR:T21461 RefSeq:NP_496189.2
UniGene:Cel.15301 ProteinModelPortal:G5ED66 SMR:G5ED66
IntAct:G5ED66 EnsemblMetazoa:F27E5.2 GeneID:185022
KEGG:cel:CELE_F27E5.2 CTD:185022 WormBase:F27E5.2 OMA:ISIDECS
NextBio:926774 Uniprot:G5ED66
Length = 308
Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 70 SMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
S DDEE S + D R + + EQ +LE +FR + + +E ++ + L ++
Sbjct: 172 SSDDEEGSSPSNDASSRRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
Query: 130 EVWFQNRRARSKLKQTEMECEYLKRWFGS 158
WF NRRAR + K M +Y + FGS
Sbjct: 232 MTWFSNRRARCR-KNMPMYQQYNVQGFGS 259
>UNIPROTKB|G5ED66 [details] [associations]
symbol:pax-3 "Protein PAX-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0002119 GO:GO:0043565 GO:GO:0010171 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035 GO:GO:0031581
EMBL:Z48783 HSSP:P06601 EMBL:Z48582 GeneTree:ENSGT00680000099553
PIR:T21461 RefSeq:NP_496189.2 UniGene:Cel.15301
ProteinModelPortal:G5ED66 SMR:G5ED66 IntAct:G5ED66
EnsemblMetazoa:F27E5.2 GeneID:185022 KEGG:cel:CELE_F27E5.2
CTD:185022 WormBase:F27E5.2 OMA:ISIDECS NextBio:926774
Uniprot:G5ED66
Length = 308
Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 70 SMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQV 129
S DDEE S + D R + + EQ +LE +FR + + +E ++ + L ++
Sbjct: 172 SSDDEEGSSPSNDASSRRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
Query: 130 EVWFQNRRARSKLKQTEMECEYLKRWFGS 158
WF NRRAR + K M +Y + FGS
Sbjct: 232 MTWFSNRRARCR-KNMPMYQQYNVQGFGS 259
>UNIPROTKB|E1B732 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0010942 "positive regulation of
cell death" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISS] [GO:0004882
"androgen receptor activity" evidence=ISS] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:0030521 "androgen receptor signaling
pathway" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0043621 "protein self-association" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060664 "epithelial cell proliferation involved
in salivary gland morphogenesis" evidence=ISS] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0071850
"mitotic cell cycle arrest" evidence=IEA] [GO:0071456 "cellular
response to hypoxia" evidence=IEA] [GO:0071356 "cellular response
to tumor necrosis factor" evidence=IEA] [GO:0071347 "cellular
response to interleukin-1" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0045930 "negative regulation
of mitotic cell cycle" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0035907 "dorsal aorta
development" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:DAAA02023594
IPI:IPI00700831 RefSeq:NP_001178084.1 UniGene:Bt.87691 PRIDE:E1B732
Ensembl:ENSBTAT00000001615 GeneID:782252 KEGG:bta:782252
NextBio:20925348 Uniprot:E1B732
Length = 243
Score = 115 (45.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
P+K+ R + +++ LE F H L+ ++ LA LKL QV++WFQNRR ++K K
Sbjct: 132 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 191
Query: 144 QTEMECEYLKR 154
Q + L++
Sbjct: 192 QLTSDLGNLEK 202
>UNIPROTKB|J9NVF8 [details] [associations]
symbol:NKX2-4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AAEX03013750 OMA:CQNGAAT
Ensembl:ENSCAFT00000047608 Uniprot:J9NVF8
Length = 207
Score = 113 (44.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 86 PRKKLRLSKEQSRL--LEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
PR+K R+ Q+++ LE F+ L+ ++E LA+ + L P QV++WFQN R + K +
Sbjct: 38 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 97
Query: 144 QTEMECEYLKR 154
+ + L++
Sbjct: 98 AKDKAAQQLQQ 108
>RGD|1309797 [details] [associations]
symbol:Hoxd12 "homeo box D12" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309797 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 GO:GO:0007389 GO:GO:0042733 OMA:PDGLPWG
OrthoDB:EOG43N7DG IPI:IPI00368581 Ensembl:ENSRNOT00000002154
Uniprot:D4ACD1
Length = 278
Score = 116 (45.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 208 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 266
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 98 (39.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
+K+ +K Q+ LE+ F N L +++ E++ + L RQV++WFQNRR + K
Sbjct: 2 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLK 56
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 98 (39.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 84 GPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
GP K+ R ++ Q+ LE+ F N L ++ E+A L L RQ+++WFQNRR + K
Sbjct: 2 GPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 98 (39.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
PR + Q LE+ F N L +++ E+A L L RQ+++WFQNRR + K Q
Sbjct: 12 PRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 98 (39.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 84 GPPRKKLR--LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
GP K+ R ++ Q+ LE+ F N L ++ E+A L L RQ+++WFQNRR + K
Sbjct: 2 GPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 98 (39.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 86 PRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
PR + Q LE+ F N L +++ E+A L L RQ+++WFQNRR + K Q
Sbjct: 12 PRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>UNIPROTKB|E1BT91 [details] [associations]
symbol:LOC100858961 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021796
"cerebral cortex regionalization" evidence=IEA] [GO:0021846 "cell
proliferation in forebrain" evidence=IEA] [GO:0021885 "forebrain
cell migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0072001 "renal system development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042493
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 KO:K09317
GeneTree:ENSGT00680000099625 CTD:2018 OMA:QMNPFLN EMBL:AADN02030958
IPI:IPI00600145 RefSeq:XP_421783.2 UniGene:Gga.50588
Ensembl:ENSGALT00000015139 GeneID:423923 KEGG:gga:423923
NextBio:20826319 Uniprot:E1BT91
Length = 247
Score = 115 (45.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 149 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 206
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 207 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 241
>UNIPROTKB|E2R6Q3 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Ensembl:ENSCAFT00000021306 Uniprot:E2R6Q3
Length = 280
Score = 116 (45.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 84 GPPRKKLR-LSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
G RKK + +K+Q LE F N +N ++++EL+ +L L +QV++WFQNRR + K
Sbjct: 210 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 268
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 118 (46.6 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 75 EESCINVDG-GPPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEV 131
+ES DG G ++LR + ++LLE + F N L ++ E+A L L RQV+V
Sbjct: 126 KESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKV 185
Query: 132 WFQNRRARSKLKQTEM-ECEYLKRWFGSLTEQNRRLQREVEE 172
WFQNRR + K +QT+ E + + F SL E + ++ + EE
Sbjct: 186 WFQNRRMKHK-RQTQCKENQNSEGKFKSL-EDSEKVDEDEEE 225
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 118 (46.6 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 75 EESCINVDG-GPPRKKLRLSKEQSRLLE--ESFRHNHTLNPKQKEELATQLKLKPRQVEV 131
+ES DG G ++LR + ++LLE + F N L ++ E+A L L RQV+V
Sbjct: 126 KESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKV 185
Query: 132 WFQNRRARSKLKQTEM-ECEYLKRWFGSLTEQNRRLQREVEE 172
WFQNRR + K +QT+ E + + F SL E + ++ + EE
Sbjct: 186 WFQNRRMKHK-RQTQCKENQNSEGKFKSL-EDSEKVDEDEEE 225
>UNIPROTKB|Q04743 [details] [associations]
symbol:EMX2 "Homeobox protein EMX2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021885 "forebrain cell migration"
evidence=IEA] [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0072001 "renal
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0030182
GO:GO:0042493 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0021846 GO:GO:0021542 eggNOG:NOG264928
KO:K09317 HOGENOM:HOG000247032 HOVERGEN:HBG005024 GO:GO:0021796
CTD:2018 OMA:QMNPFLN OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001
EMBL:AF301598 EMBL:AL161811 EMBL:AK055041 EMBL:AC005871 EMBL:X68880
IPI:IPI00029166 PIR:S22722 RefSeq:NP_001159396.1 RefSeq:NP_004089.1
UniGene:Hs.202095 ProteinModelPortal:Q04743 SMR:Q04743
IntAct:Q04743 STRING:Q04743 PhosphoSite:Q04743 DMDM:19862512
PRIDE:Q04743 DNASU:2018 Ensembl:ENST00000369201
Ensembl:ENST00000553456 GeneID:2018 KEGG:hsa:2018 UCSC:uc001ldh.4
GeneCards:GC10P119291 HGNC:HGNC:3341 MIM:269160 MIM:600035
neXtProt:NX_Q04743 Orphanet:799 PharmGKB:PA27778 InParanoid:Q04743
PhylomeDB:Q04743 GenomeRNAi:2018 NextBio:8177 ArrayExpress:Q04743
Bgee:Q04743 CleanEx:HS_EMX2 Genevestigator:Q04743
GermOnline:ENSG00000170370 Uniprot:Q04743
Length = 252
Score = 115 (45.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 154 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 211
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 212 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 246
>UNIPROTKB|Q17R00 [details] [associations]
symbol:EMX2 "Homeobox protein EMX2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0072001 "renal
system development" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0021885 "forebrain cell migration" evidence=IEA] [GO:0021846
"cell proliferation in forebrain" evidence=IEA] [GO:0021796
"cerebral cortex regionalization" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0042493 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0021846 GO:GO:0021542 eggNOG:NOG264928 KO:K09317
GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
HOVERGEN:HBG005024 GO:GO:0021796 EMBL:BC118094 IPI:IPI00711250
RefSeq:NP_001069313.1 UniGene:Bt.27308 ProteinModelPortal:Q17R00
PRIDE:Q17R00 Ensembl:ENSBTAT00000003937 GeneID:523601
KEGG:bta:523601 CTD:2018 InParanoid:Q17R00 OMA:QMNPFLN
OrthoDB:EOG4BP1CQ NextBio:20873784 GO:GO:0021885 GO:GO:0072001
Uniprot:Q17R00
Length = 253
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 155 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 212
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 213 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 247
>UNIPROTKB|E2RQP4 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0072001
"renal system development" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0021885 "forebrain cell migration" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021796 "cerebral cortex regionalization" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0042493 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0021846 GO:GO:0021542 KO:K09317 GeneTree:ENSGT00680000099625
GO:GO:0021796 CTD:2018 OMA:QMNPFLN GO:GO:0021885 GO:GO:0072001
EMBL:AAEX03015567 EMBL:AAEX03015568 EMBL:AAEX03015569
RefSeq:XP_853333.1 ProteinModelPortal:E2RQP4 SMR:E2RQP4
Ensembl:ENSCAFT00000019038 GeneID:610697 KEGG:cfa:610697
NextBio:20896247 Uniprot:E2RQP4
Length = 253
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 155 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 212
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 213 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 247
>MGI|MGI:95388 [details] [associations]
symbol:Emx2 "empty spiracles homeobox 2" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021542 "dentate gyrus development"
evidence=IMP] [GO:0021796 "cerebral cortex regionalization"
evidence=IGI;IMP] [GO:0021846 "cell proliferation in forebrain"
evidence=IMP] [GO:0021885 "forebrain cell migration" evidence=IMP]
[GO:0021987 "cerebral cortex development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI;IMP] [GO:0042493 "response to drug"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0072001 "renal system development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:95388 GO:GO:0005634
GO:GO:0030182 GO:GO:0042493 GO:GO:0009952 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH466585 GO:GO:0000976 GO:GO:0010468 GO:GO:0021846
GO:GO:0021542 eggNOG:NOG264928 KO:K09317
GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
HOVERGEN:HBG005024 GO:GO:0021796 CTD:2018 OMA:QMNPFLN
OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001 EMBL:AY117415
EMBL:AC098733 EMBL:X68882 IPI:IPI00230094 PIR:S29086
RefSeq:NP_034262.2 UniGene:Mm.245394 ProteinModelPortal:Q04744
STRING:Q04744 PhosphoSite:Q04744 PRIDE:Q04744
Ensembl:ENSMUST00000062216 GeneID:13797 KEGG:mmu:13797
UCSC:uc008ibl.1 InParanoid:Q04744 NextBio:284546 CleanEx:MM_EMX2
Genevestigator:Q04744 GermOnline:ENSMUSG00000043969 Uniprot:Q04744
Length = 253
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 155 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 212
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 213 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 247
>RGD|1564797 [details] [associations]
symbol:Emx2 "empty spiracles homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007420
"brain development" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0010468 "regulation of
gene expression" evidence=ISO] [GO:0021542 "dentate gyrus
development" evidence=IEA;ISO] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA;ISO] [GO:0021846 "cell proliferation
in forebrain" evidence=IEA;ISO] [GO:0021885 "forebrain cell
migration" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEA;ISO] [GO:0072001 "renal
system development" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564797 GO:GO:0005634 GO:GO:0030182 GO:GO:0042493
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0021846
GO:GO:0021542 KO:K09317 GeneTree:ENSGT00680000099625 GO:GO:0021796
CTD:2018 OMA:QMNPFLN OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001
EMBL:CH473986 IPI:IPI00358539 RefSeq:NP_001102639.1
UniGene:Rn.16276 SMR:D3ZCK7 Ensembl:ENSRNOT00000012564
GeneID:499380 KEGG:rno:499380 NextBio:702728 Uniprot:D3ZCK7
Length = 253
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR +K K+
Sbjct: 155 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR--TKFKR 212
Query: 145 TEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVI 184
++E E GS ++Q ++ + R A K P I
Sbjct: 213 QKLEEE------GSDSQQKKKGTHHINRWRIATKQASPEEI 247
>RGD|1306149 [details] [associations]
symbol:Nkx2-6 "NK2 homeobox 6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007507 "heart development" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA;ISO] [GO:0021854
"hypothalamus development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043586 "tongue development"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0055014 "atrial cardiac muscle cell development"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA;ISO] [GO:0060039 "pericardium
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1306149 GO:GO:0005634 GO:GO:0043066 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060037
GO:GO:0048565 GO:GO:0055015 GO:GO:0021854 GO:GO:0060039
GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 OrthoDB:EOG4WM4WF CTD:137814 eggNOG:NOG301183
KO:K09346 EMBL:BC160896 IPI:IPI00359714 RefSeq:NP_001121125.1
UniGene:Rn.137335 SMR:B1H280 Ensembl:ENSRNOT00000032826
GeneID:364418 KEGG:rno:364418 UCSC:RGD:1306149 NextBio:685372
Genevestigator:B1H280 Uniprot:B1H280
Length = 213
Score = 113 (44.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 86 PRKKLRL--SKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLK 143
PR+K R+ S+ Q LE F+ L+ ++E LA+ L+L QV++WFQNRR + K +
Sbjct: 49 PRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASVLQLTSTQVKIWFQNRRYKCKRQ 108
Query: 144 QTEMECE 150
+ + E
Sbjct: 109 RQDQTLE 115
>UNIPROTKB|Q04741 [details] [associations]
symbol:EMX1 "Homeobox protein EMX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0021796 "cerebral cortex regionalization"
evidence=IEA] [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0042493 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009791 KO:K09317 CTD:2016 eggNOG:NOG266219
HOGENOM:HOG000247032 HOVERGEN:HBG005024 EMBL:AC012366 EMBL:BC037242
EMBL:BC045762 EMBL:X68879 IPI:IPI00374132 IPI:IPI00942065
PIR:S22721 RefSeq:NP_004088.2 UniGene:Hs.516090
ProteinModelPortal:Q04741 SMR:Q04741 STRING:Q04741 DMDM:57015304
PaxDb:Q04741 PRIDE:Q04741 Ensembl:ENST00000258106 GeneID:2016
KEGG:hsa:2016 UCSC:uc002sin.1 GeneCards:GC02P073144 HGNC:HGNC:3340
HPA:HPA006421 MIM:600034 neXtProt:NX_Q04741 PharmGKB:PA27777
InParanoid:Q04741 PhylomeDB:Q04741 ChiTaRS:EMX1 GenomeRNAi:2016
NextBio:8167 ArrayExpress:Q04741 Bgee:Q04741 CleanEx:HS_EMX1
Genevestigator:Q04741 GermOnline:ENSG00000135638 GO:GO:0021796
Uniprot:Q04741
Length = 257
Score = 115 (45.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR + K ++
Sbjct: 159 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQK 218
Query: 145 TEME 148
E E
Sbjct: 219 LEEE 222
>MGI|MGI:95387 [details] [associations]
symbol:Emx1 "empty spiracles homeobox 1" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0021796 "cerebral
cortex regionalization" evidence=IGI] [GO:0021987 "cerebral cortex
development" evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0042493 "response to drug" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:95387 GO:GO:0005634 GO:GO:0030182 GO:GO:0042493
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009791 KO:K09317 CTD:2016
eggNOG:NOG266219 GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
HOVERGEN:HBG005024 OMA:NHHINRW OrthoDB:EOG44QT1V GO:GO:0021796
EMBL:BC104322 EMBL:BC104323 EMBL:X68881 IPI:IPI00109714 PIR:S29085
RefSeq:NP_034261.1 UniGene:Mm.391473 ProteinModelPortal:Q04742
SMR:Q04742 STRING:Q04742 PRIDE:Q04742 DNASU:13796
Ensembl:ENSMUST00000045942 GeneID:13796 KEGG:mmu:13796
UCSC:uc009cpi.1 InParanoid:Q04742 NextBio:284542 Bgee:Q04742
CleanEx:MM_EMX1 Genevestigator:Q04742 GermOnline:ENSMUSG00000033726
Uniprot:Q04742
Length = 257
Score = 115 (45.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR + K ++
Sbjct: 159 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQK 218
Query: 145 TEME 148
E E
Sbjct: 219 LEEE 222
>RGD|1564002 [details] [associations]
symbol:Emx1 "empty spiracles homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0021796 "cerebral cortex regionalization" evidence=IEA;ISO]
[GO:0021987 "cerebral cortex development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IEA;ISO] [GO:0042493 "response to
drug" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564002 GO:GO:0005634 GO:GO:0030182 GO:GO:0042493
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009791 KO:K09317 CTD:2016
GeneTree:ENSGT00680000099625 OMA:NHHINRW OrthoDB:EOG44QT1V
GO:GO:0021796 IPI:IPI00207660 RefSeq:XP_001073769.3
RefSeq:XP_575584.4 UniGene:Rn.140907 Ensembl:ENSRNOT00000020786
GeneID:500235 KEGG:rno:500235 UCSC:RGD:1564002 Uniprot:D3ZV90
Length = 257
Score = 115 (45.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + S Q LE +F NH + ++++LA L L QV+VWFQNRR + K ++
Sbjct: 159 PKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQK 218
Query: 145 TEME 148
E E
Sbjct: 219 LEEE 222
>MGI|MGI:1346018 [details] [associations]
symbol:Vax2 "ventral anterior homeobox containing gene 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
Length = 292
Score = 116 (45.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 85 PPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQ 144
P R + + EQ LE F+ + +++ ELA QL L QV+VWFQNRR + K Q
Sbjct: 102 PKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ 161
Query: 145 TEMECEYLKRWFGSLTEQ--NRRLQREVEELRAMKVG-PPTVISPHSCEP-LPAS 195
+ + E KR S +E + R +E+ R + V P++++ P LPAS
Sbjct: 162 SR-DLE--KRASSSASEAFATSNVLRLLEQGRLLSVPRAPSLLALTPGLPGLPAS 213
>RGD|1310629 [details] [associations]
symbol:Nkx2-8 "NK2 homeobox 8" species:10116 "Rattus norvegicus"
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030323
"respiratory tube development" evidence=ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1310629 GO:GO:0005634
GO:GO:0030324 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366
GO:GO:0003690 GO:GO:0007409 GO:GO:0050680 EMBL:CH473947
GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347 OMA:ERSHYPS
OrthoDB:EOG466VN6 IPI:IPI00367165 RefSeq:NP_001100202.1
UniGene:Rn.218683 Ensembl:ENSRNOT00000011562 GeneID:299061
KEGG:rno:299061 UCSC:RGD:1310629 NextBio:644726 Uniprot:D4A7B5
Length = 234
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 87 RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSK 141
++++ SK Q+ LE FR L+ ++E+LA L+L P QV++WFQN R + K
Sbjct: 83 KRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLK 137
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 114 (45.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F N L +++ E+A L L RQ+++WFQNRR
Sbjct: 138 NYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 197
Query: 139 RSK 141
+ K
Sbjct: 198 KWK 200
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 114 (45.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 80 NVDGGPP-RKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRA 138
N GG P R + +++Q LE+ F N L +++ E+A L L RQ+++WFQNRR
Sbjct: 140 NYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 199
Query: 139 RSK 141
+ K
Sbjct: 200 KWK 202
WARNING: HSPs involving 341 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 209 0.00079 112 3 11 23 0.42 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 591
No. of states in DFA: 594 (63 KB)
Total size of DFA: 163 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.35u 0.10s 26.45t Elapsed: 00:00:01
Total cpu time: 26.37u 0.10s 26.47t Elapsed: 00:00:01
Start: Fri May 10 07:47:04 2013 End: Fri May 10 07:47:05 2013
WARNINGS ISSUED: 2