Citrus Sinensis ID: 026325


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MAIIPRSSSSLDLTISVPGFSSSDDGDHHHHQQQAGGSAMKDLDINQVPSEDTEWNNWNTATATTTGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPALQSR
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*********************************************************************************************KEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRR*****KQTEMECEYLKRWFGSLT******************************************C*************************************
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MAIIPRSSSSLDLTISVPGFSSSDDGDHHHHQQQAGGSAMKDLDINQVPSEDTEWNNWNTATATTTGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLEESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWxxxxxxxxxxxxxxxxxxxxxKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAIDKGPTKVTTASSTPAALSPKVGTPALQSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox-leucine zipper protein HOX3 Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'.probableQ0JKX1
Homeobox-leucine zipper protein HOX3 Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'.probableQ9XH38
Homeobox-leucine zipper protein ATHB-17 Probable transcription factor.probableQ8S9N6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NK2, chain P
Confidence level:very confident
Coverage over the Query: 82-146
View the alignment between query and template
View the model in PyMOL
Template: 1HJB, chain A
Confidence level:probable
Coverage over the Query: 137-179
View the alignment between query and template
View the model in PyMOL