Query 026326
Match_columns 240
No_of_seqs 131 out of 278
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 10:54:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ds6_B RHO GDP-dissociation in 100.0 5.5E-79 1.9E-83 523.3 16.7 176 63-240 1-178 (180)
2 1doa_B RHO GDI 1, protein (GDP 100.0 2.2E-78 7.6E-83 532.2 17.3 176 63-240 40-217 (219)
3 1kmt_A RHO GDP-dissociation in 100.0 2E-61 6.7E-66 400.8 15.5 136 104-240 2-139 (141)
4 2ag4_A GM2-AP, ganglioside GM2 92.6 1.4 4.7E-05 36.2 11.0 40 196-237 123-162 (164)
5 1xwv_A DER F II; beta sheets, 85.1 10 0.00036 29.5 10.4 93 139-238 26-129 (129)
6 1nep_A EPV20, BNPC2, epididyma 84.2 13 0.00045 28.9 12.7 93 139-237 27-129 (130)
7 3t5g_B Retinal ROD rhodopsin-s 81.9 3.9 0.00013 34.1 6.9 83 147-231 60-147 (152)
8 2r5o_A Putative ATP binding co 78.1 16 0.00055 29.8 9.5 108 106-233 45-160 (188)
9 4goj_C Protein UNC-119 homolog 55.2 7.3 0.00025 34.6 3.0 83 151-234 146-236 (240)
10 1lyq_A PCOC copper resistance 53.7 35 0.0012 25.8 6.3 30 207-237 75-104 (104)
11 2oxg_Z SOXZ protein; immunoglo 43.1 1.1E+02 0.0037 23.4 9.3 77 143-236 15-107 (108)
12 2c9r_A COPC, copper resistance 31.1 50 0.0017 24.8 3.9 30 207-237 73-102 (102)
13 3isy_A Bsupi, intracellular pr 29.0 81 0.0028 24.8 4.9 71 139-220 23-102 (120)
14 3nkg_A Uncharacterized protein 27.3 35 0.0012 28.9 2.6 61 121-192 4-68 (174)
15 1xvs_A Protein APAG; MCSG APC2 26.3 2.4E+02 0.0081 22.2 8.0 57 165-227 42-110 (126)
16 1tza_A APAG protein, SOR45; st 25.9 2.5E+02 0.0086 22.3 7.7 57 165-227 42-110 (134)
17 3pe9_A Fibronectin(III)-like m 24.1 1.1E+02 0.0038 22.9 4.7 40 191-238 49-88 (98)
18 1xq4_A Protein APAG; all beta 23.2 2.9E+02 0.01 22.1 7.9 58 164-227 46-115 (139)
19 3gqq_A Protein UNC-119 homolog 21.5 1.2E+02 0.004 26.2 4.8 87 147-234 97-191 (195)
20 4gbs_A Putative lipoprotein; P 21.3 87 0.003 25.6 3.9 24 211-235 170-197 (200)
21 2y72_A Collagenase, collagenas 20.4 1.9E+02 0.0065 20.2 5.2 25 210-235 58-82 (85)
No 1
>1ds6_B RHO GDP-dissociation inhibitor 2; beta sandwhich, protein-protein complex, G-domain, immunoglobulin fold, walker fold, GTP-binding protein; HET: GDP; 2.35A {Homo sapiens} SCOP: b.1.18.8 PDB: 1fst_A
Probab=100.00 E-value=5.5e-79 Score=523.32 Aligned_cols=176 Identities=36% Similarity=0.598 Sum_probs=168.5
Q ss_pred ccccCCcccChHHHHhcCCCchhHHHHHhhhCCCcCCCCCCCCCCcEEEEEEEEEeCCC-CceEeeCCCCC-CCCCceeE
Q 026326 63 AGFSPGPLVSLKEQIEKDKDDDSLRRWKEKLLGCVEGDLNGQMEPEVKFHSIGIISDDF-GEITTPLPIDK-NQNGHVLF 140 (240)
Q Consensus 63 ~~yk~g~~ksl~E~~~lD~eDESL~kwKesLLG~~~~~~~~~~~p~V~i~~L~L~~egr-~~i~~~L~~~~-~~k~~~~f 140 (240)
+||+||++|||+||++||++|||||||||||||+++ .+.++++|+|+|++|+|+++|| +||+++|+++. .++++ +|
T Consensus 1 ~~yk~~~~ksl~e~~~~D~~DESL~k~K~~Llg~~~-~~~~~~~p~v~i~~l~l~~~~~~~pi~~dl~~~~~~~k~~-~f 78 (180)
T 1ds6_B 1 GNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGP-VVTDPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKE-TI 78 (180)
T ss_dssp CCCCCCCCCCHHHHHHTTTTCHHHHHHHHHHTCCSC-CCCCSSSCSCCEEEEEEECTTCSSCCEEETTSCHHHHHHC-EE
T ss_pred CCcCcCCccCHHHHHhhCcchHHHHHHHHHhcCCCC-CcCCCCCCeEEEEEEEEEeCCCCCCEEEECCCChhhccCC-CE
Confidence 479999999999999999999999999999999876 5667888999999999999999 89999999875 35775 99
Q ss_pred EeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEeecccccccccCCCCCCeeEecCCCCCCceeeeeeeeeeeEEEE
Q 026326 141 TLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGTFAPQREPYVHTLEEETTPSGVLARGLYSAKLKFE 220 (240)
Q Consensus 141 ~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGSY~P~~e~Y~~~fp~EeAPSGmLaRG~Y~akSkFv 220 (240)
+|||||+|+|+|+|+|||+|||||||+|+|||+||+|+++++|||||+|++++|+|+||+|||||||||||+|+|+|+|+
T Consensus 79 ~iKEGs~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~~mlGsy~P~~e~y~~~~p~eeaPsG~laRG~Y~a~skF~ 158 (180)
T 1ds6_B 79 VLKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFT 158 (180)
T ss_dssp EEETTCEEEEEEEECCCSSCEEEEEEEEEEEETTEEEEEEEEEEEEECCCSSCEEEECCCEECCCSTTTCEEEEEEEEEE
T ss_pred EecCCcEEEEEEEEEEecccccCcEEEEEEEECCEEECCceEeeeccCCCCCceeecCCCccCCcceeeeeeeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceEEEEEEeEEEeecC
Q 026326 221 DDDRRCHMELNYSFEIKKSR 240 (240)
Q Consensus 221 DDDk~~hL~~eWsfeI~Kd~ 240 (240)
|||+++||+|+|+|+|+|+|
T Consensus 159 DDD~~~hl~~~wsfeI~KdW 178 (180)
T 1ds6_B 159 DDDKQDHLSWEWNLSIKKEW 178 (180)
T ss_dssp CTTCCCCEEEEEEEEEESSC
T ss_pred cCCCceEEEEEEEEEEeeCC
Confidence 99999999999999999999
No 2
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=100.00 E-value=2.2e-78 Score=532.20 Aligned_cols=176 Identities=34% Similarity=0.582 Sum_probs=167.6
Q ss_pred ccccCCcccChHHHHhcCCCchhHHHHHhhhCCCcCCCCCCCCCCcEEEEEEEEEeCCCC-ceEeeCCCCC-CCCCceeE
Q 026326 63 AGFSPGPLVSLKEQIEKDKDDDSLRRWKEKLLGCVEGDLNGQMEPEVKFHSIGIISDDFG-EITTPLPIDK-NQNGHVLF 140 (240)
Q Consensus 63 ~~yk~g~~ksl~E~~~lD~eDESL~kwKesLLG~~~~~~~~~~~p~V~i~~L~L~~egr~-~i~~~L~~~~-~~k~~~~f 140 (240)
++|+||++|||+||++||++|||||||||||||+++ .+.++++|+|+|++|+|+|+||| ||+++|+++. .++++ +|
T Consensus 40 ~~yk~~~~ksl~E~~~lD~~DESL~kwKesLlg~~~-~~~d~~~P~V~i~~l~l~~~grp~pi~ldl~~~~~~lk~~-~F 117 (219)
T 1doa_B 40 VNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVA-VSADPNVPNVVVTRLTLVCSTAPGPLELDLTGDLESFKKQ-SF 117 (219)
T ss_dssp CCCCCCCCCCHHHHHHTTTTCHHHHHHHHHHHCCCC-CCCCSSCCSBCCCEEEEECSSCSSCCEEECSSCCGGGGGC-CE
T ss_pred cCcccCCccCHHHHHhhCcchhHHHHHHHHhcCCCC-CcCCCCCCeEEEEEEEEEeCCCCCCEEEeCCCChhhhcCC-CE
Confidence 459999999999999999999999999999999776 46678889999999999999995 5999999875 45776 99
Q ss_pred EeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEeecccccccccCCCCCCeeEecCCCCCCceeeeeeeeeeeEEEE
Q 026326 141 TLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGTFAPQREPYVHTLEEETTPSGVLARGLYSAKLKFE 220 (240)
Q Consensus 141 ~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGSY~P~~e~Y~~~fp~EeAPSGmLaRG~Y~akSkFv 220 (240)
+|||||+|+|+|+|+|||+|||||||+|+|||+||+|+++++|||||+|++++|+|+||+|||||||||||+|+|+|+|+
T Consensus 118 ~IKEGs~Y~lki~FkV~~eIVsGLkY~q~VkR~GI~Vdk~~~MlGSY~P~~e~y~~~~p~EeAPSGmLARG~Y~akSkF~ 197 (219)
T 1doa_B 118 VLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFT 197 (219)
T ss_dssp EEETTCEEEEEEEECBCSSCEEEEEEEEEEEETTEEEEEEEEEEEEECCCSSCEEEECCCEECCCTTSCCSEEEEEEEEE
T ss_pred EecCCCEEEEEEEEEEecceecCcEEEEEEEECCeEECCcceeeeccCCCCCcccccCCCccCCccceeeeeeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceEEEEEEeEEEeecC
Q 026326 221 DDDRRCHMELNYSFEIKKSR 240 (240)
Q Consensus 221 DDDk~~hL~~eWsfeI~Kd~ 240 (240)
|||+++||+|+|+|+|+|||
T Consensus 198 DDD~~~hL~~eWsfeI~KdW 217 (219)
T 1doa_B 198 DDDRTDHLSWEWNLTIKKEW 217 (219)
T ss_dssp CTTCCCCEEEEEEEEEESST
T ss_pred eCCCceEEEEEEEEEEecCC
Confidence 99999999999999999999
No 3
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=100.00 E-value=2e-61 Score=400.80 Aligned_cols=136 Identities=31% Similarity=0.590 Sum_probs=130.1
Q ss_pred CCCCcEEEEEEEEEeCCCC-ceEeeCCCCC-CCCCceeEEeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEeeccc
Q 026326 104 QMEPEVKFHSIGIISDDFG-EITTPLPIDK-NQNGHVLFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSK 181 (240)
Q Consensus 104 ~~~p~V~i~~L~L~~egr~-~i~~~L~~~~-~~k~~~~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e 181 (240)
+++|+|+|++|+|+++||+ ||+++|+++. +++++ +|+|||||+|+|+|+|+|||+|||||||+|+|||+||+|++++
T Consensus 2 p~~p~v~i~~l~l~~~~~~~pi~~~l~~~~~~~k~~-~f~iKEG~~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~ 80 (141)
T 1kmt_A 2 AMVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQ-SFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTD 80 (141)
T ss_dssp CBCCSEEEEEEEEECTTSSSCCEEETTSCGGGGGGC-CEEEETTCEEEEEEEEEECSSCEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEEEEEeCCCCCCEEEeCCCChhhhccC-ceEccCCcEEEEEEEEEEccccccCcEEEEEEEECCEEECcce
Confidence 4578999999999999965 7999999875 45776 9999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCeeEecCCCCCCceeeeeeeeeeeEEEEeCCCceEEEEEEeEEEeecC
Q 026326 182 GMLGTFAPQREPYVHTLEEETTPSGVLARGLYSAKLKFEDDDRRCHMELNYSFEIKKSR 240 (240)
Q Consensus 182 ~mlGSY~P~~e~Y~~~fp~EeAPSGmLaRG~Y~akSkFvDDDk~~hL~~eWsfeI~Kd~ 240 (240)
+|||||+|++++|+|+||+|||||||||||+|+|+|+|+|||+++||+|+|+|+|+|||
T Consensus 81 ~mlGsy~P~~e~y~~~~~~eeaPsG~laRG~Y~a~s~F~DDD~~~hl~~~w~feI~KdW 139 (141)
T 1kmt_A 81 YMVGSYGPRAAAYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 139 (141)
T ss_dssp EEEEEECCCSSCEEEECCCEECCCSTTTCEEEEEEEEEECTTCCCSEEEEEEEEEESCC
T ss_pred EeeeccCCCCCcceecCCCccCCceeEEeeeeeeeEEEEcCCCcEEEEEEEeEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999
No 4
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=92.64 E-value=1.4 Score=36.19 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=30.3
Q ss_pred EecCCCCCCceeeeeeeeeeeEEEEeCCCceEEEEEEeEEEe
Q 026326 196 HTLEEETTPSGVLARGLYSAKLKFEDDDRRCHMELNYSFEIK 237 (240)
Q Consensus 196 ~~fp~EeAPSGmLaRG~Y~akSkFvDDDk~~hL~~eWsfeI~ 237 (240)
+.+|..+.|+ +|..|.|+++..+.| +++...=.+-.|.|+
T Consensus 123 ~~lp~~~lP~-~l~~G~Y~v~~~~~~-~~~~l~Ci~~~~~l~ 162 (164)
T 2ag4_A 123 FVVPDLELPS-WLTTGNYRIESVLSS-SGKRLGCIKIAASLK 162 (164)
T ss_dssp EEECCCCCCT-TCSSEEEEEEEEEEE-TTEEEEEEEEEEEEE
T ss_pred eecCcccccC-ccCCceEEEEEEEec-CCCEEEEEEEEEEEE
Confidence 6677778998 999999999999988 555554555555553
No 5
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=85.06 E-value=10 Score=29.49 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=63.4
Q ss_pred eEEeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEeecc--cccccccC--CCC--CC--eeEecCC-CCCCceeee
Q 026326 139 LFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQS--KGMLGTFA--PQR--EP--YVHTLEE-ETTPSGVLA 209 (240)
Q Consensus 139 ~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~--e~mlGSY~--P~~--e~--Y~~~fp~-EeAPSGmLa 209 (240)
|=.|+-|..++|.+.|.-+.+ ++.|+-.-.++=.|+.+-=. ..-.=++. |=. +. |.+.+|. ...|.
T Consensus 26 pC~l~rG~~~~i~~~f~~~~~-~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~v~~~~P~---- 100 (129)
T 1xwv_A 26 PCIIHRGKPFTLEALFDANQN-TKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWNVPKIAPK---- 100 (129)
T ss_dssp CEEEETTSEEEEEEEEECCSC-BSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEECCTTSCC----
T ss_pred CCEEeCCCeEEEEEEEECCCc-cceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeEecccCCC----
Confidence 778999999999999998877 78998888888889887311 00000111 221 23 4444653 33554
Q ss_pred eee-eeeeEEEEeCCCceEEEE-EEeEEEee
Q 026326 210 RGL-YSAKLKFEDDDRRCHMEL-NYSFEIKK 238 (240)
Q Consensus 210 RG~-Y~akSkFvDDDk~~hL~~-eWsfeI~K 238 (240)
++ |.++-..+|+++ ...=| .-.++|++
T Consensus 101 -v~~~~v~~~L~d~~~-~l~Cf~~~~~~I~~ 129 (129)
T 1xwv_A 101 -SENVVVTVKLVGDNG-VLACAIATHAKIRD 129 (129)
T ss_dssp -BSCEEEEEEEEETTE-EEEEEEECCEEEEC
T ss_pred -CceEEEEEEEEcCCC-cEEEEecccEEEeC
Confidence 67 999999999988 56566 67777764
No 6
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=84.16 E-value=13 Score=28.91 Aligned_cols=93 Identities=17% Similarity=0.216 Sum_probs=63.6
Q ss_pred eEEeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEee--cc-cccc--cccCCCC--CC--eeEecCC-CCCCceee
Q 026326 139 LFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVD--QS-KGML--GTFAPQR--EP--YVHTLEE-ETTPSGVL 208 (240)
Q Consensus 139 ~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vd--k~-e~ml--GSY~P~~--e~--Y~~~fp~-EeAPSGmL 208 (240)
|=.|+-|..++|.+.|.-+.++ ++|+-.-.++=.|+++- -. ..-- |..=|-. +. |.+.+|. ...|.
T Consensus 27 PC~l~rG~~~~i~i~f~~~~~~-~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lpV~~~~P~--- 102 (130)
T 1nep_A 27 PCKLHRGQSYSVNVTFTSNTQS-QSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLPVKNEYPS--- 102 (130)
T ss_dssp SEEEETTCEEEEEEEEEESSCB-SCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEECCTTSCS---
T ss_pred CCEEEcCCeEEEEEEEEccccc-ceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeEecccCCC---
Confidence 7789999999999999998874 67777666667888773 11 1111 2222332 23 5555552 23554
Q ss_pred eeeeeeeeEEEEeCCCceEEEEEEeEEEe
Q 026326 209 ARGLYSAKLKFEDDDRRCHMELNYSFEIK 237 (240)
Q Consensus 209 aRG~Y~akSkFvDDDk~~hL~~eWsfeI~ 237 (240)
++|.++...+|+++....=|.-.++|+
T Consensus 103 --~~~~v~~~L~d~~~~~l~C~~~~~~I~ 129 (130)
T 1nep_A 103 --IKVVVEWELTDDKNQRFFCWQIPIEVE 129 (130)
T ss_dssp --SEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred --ccEEEEEEEEcCCCCEEEEEEEeEEEE
Confidence 679999999999998776777777765
No 7
>3t5g_B Retinal ROD rhodopsin-sensitive CGMP 3',5'-cyclic phosphodiesterase subunit delta...; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: b.1.18.8 PDB: 1ksg_B* 1ksj_B* 1ksh_B* 3t5i_B*
Probab=81.92 E-value=3.9 Score=34.14 Aligned_cols=83 Identities=17% Similarity=0.170 Sum_probs=63.4
Q ss_pred eEEEEEEEEEeceeeecceeEEEEEEcceEeecccccccccCCCCC---CeeEecCCC--CCCceeeeeeeeeeeEEEEe
Q 026326 147 RFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGTFAPQRE---PYVHTLEEE--TTPSGVLARGLYSAKLKFED 221 (240)
Q Consensus 147 ~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGSY~P~~e---~Y~~~fp~E--eAPSGmLaRG~Y~akSkFvD 221 (240)
.-.-+|.|.+ .++|.++|-+|.++=+|-.+..-.+-.|=-.|++. ...+.+|++ -.|. -+.-|.-.+..+|+|
T Consensus 60 ~V~~~i~Fs~-~epi~nFRmierhyf~~~lle~~dF~FGF~IP~StNTWe~i~E~~~~~~mlpa-~~lsGnv~IeT~f~d 137 (152)
T 3t5g_B 60 AVSRELNFSS-TEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPA-SVLTGNVIIETKFFD 137 (152)
T ss_dssp EEEEEEEEEE-SSCEEEEEEEEEEEETTEEEEEEEEEEEEECTTEEEEEEEEEEBCCGGGSCCH-HHHTTTEEEEEEEEE
T ss_pred hheEEEEEec-cccccccEEEEEEEEcCceeeeEeeeeeeEcCCCCcccceEEEcCCccccCCH-hHcCCcEEEEEEEec
Confidence 4556889998 88999999999999999999998998888889965 355555533 2232 223599999999999
Q ss_pred CCCceEEEEE
Q 026326 222 DDRRCHMELN 231 (240)
Q Consensus 222 DDk~~hL~~e 231 (240)
+|.-+.-+--
T Consensus 138 ~d~li~~s~v 147 (152)
T 3t5g_B 138 DDLLVSTSRV 147 (152)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEeEE
Confidence 9876664433
No 8
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=78.12 E-value=16 Score=29.75 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=62.5
Q ss_pred CCcEEEEEEEEEeCCCCceEeeCCCCCCCCCceeEEeccCCeEEEEEEEEEeceeeecceeEEEEEE-cceEeecccccc
Q 026326 106 EPEVKFHSIGIISDDFGEITTPLPIDKNQNGHVLFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWK-AGLQVDQSKGML 184 (240)
Q Consensus 106 ~p~V~i~~L~L~~egr~~i~~~L~~~~~~k~~~~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR-~GI~Vdk~e~ml 184 (240)
...+.|.++.|.-.+..+ .. .+.-|..++|+|+|++..+ +..+.+-=.++. .|..|--...+.
T Consensus 45 sg~a~I~~v~l~d~~G~~-----------~~----~~~~Ge~v~l~i~~~~~~~-i~~~v~G~~Ik~~~G~~I~g~nT~~ 108 (188)
T 2r5o_A 45 QGGAKIIDYHIQSAGVDF-----------PP----SLTGNQQTDFLMKVVFEYD-FDCVVPGILIKTLDGLFLYGTNSFL 108 (188)
T ss_dssp CCSEEEEEEEEEETTEES-----------CS----SEETTCEEEEEEEEEESSC-EEEEEEEEEEEETTCCEEEEEEHHH
T ss_pred CCcEEEEEEEEEECCCCE-----------ee----EEeCCCEEEEEEEEEECCc-CCccEEEEEEECCCCCEEEecCccc
Confidence 456788888886543211 11 2566788888999999654 345554444444 488776554333
Q ss_pred cccCC-----CCC-CeeEecCCCCCCceeeeeeeeeeeEEEEeCC-CceEEEEEEe
Q 026326 185 GTFAP-----QRE-PYVHTLEEETTPSGVLARGLYSAKLKFEDDD-RRCHMELNYS 233 (240)
Q Consensus 185 GSY~P-----~~e-~Y~~~fp~EeAPSGmLaRG~Y~akSkFvDDD-k~~hL~~eWs 233 (240)
-...+ ++. .+++.|... . .|.-|.|.+..-+.+.+ ...+..+.|.
T Consensus 109 ~~~~~~~~~~~~G~~~~v~f~f~-l---~L~~G~Y~lsv~i~~~~~~~~~~~~d~~ 160 (188)
T 2r5o_A 109 ASEGRENISVSRGDVRVFKFSLP-V---DLNSGDYLLSFGISAGNPQTDMTPLDRR 160 (188)
T ss_dssp HTTTCCCEEECTTCEEEEEEEEE-C---CBCSEEEEEEEEEEEEETTTEEEEEEEE
T ss_pred ccccccccccCCCCEEEEEEEEe-c---ccCCCeEEEEEEEecCCcCCCcEEEEEE
Confidence 21222 222 223333222 2 48889999999998876 4455444554
No 9
>4goj_C Protein UNC-119 homolog A; small G protein ARL, GDI-like solubilizing factors, cilia, S protein; HET: GNP; 2.10A {Homo sapiens} PDB: 4gok_G*
Probab=55.18 E-value=7.3 Score=34.60 Aligned_cols=83 Identities=17% Similarity=0.211 Sum_probs=59.8
Q ss_pred EEEEEEeceeeecceeEEEEEEcceEeecccccccccCCCCC---CeeEecC--CCCCCceeeeeeeeeee--EEEEeCC
Q 026326 151 KLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGTFAPQRE---PYVHTLE--EETTPSGVLARGLYSAK--LKFEDDD 223 (240)
Q Consensus 151 ~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGSY~P~~e---~Y~~~fp--~EeAPSGmLaRG~Y~ak--SkFvDDD 223 (240)
+|.|.|-.++|..||-+|.++=+|..+..-.+-.|=--|++. .+.|.+| .+..|.-|+. |.|..+ |.|.+||
T Consensus 146 ~i~Fsvgdkpv~nFRmiERhyFrd~lLksfDFeFGFcIPnS~NTWE~IyE~p~ls~~l~~emi~-~p~Et~sdSFYFvdd 224 (240)
T 4goj_C 146 TVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIR-HPYETQSDSFYFVDD 224 (240)
T ss_dssp EEEEECCSSCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCEEEEEEEEECCCCCHHHHHHHHH-STTCEEEEEEEEETT
T ss_pred EEEEeeCceehhcceeeehhhhcccchheeccccceeccCCcccceeEEecCCcchhhHHHHHh-CCCceeeeeeEEECC
Confidence 499999888999999999999999999999999998889975 3555555 4445555555 888544 3343443
Q ss_pred C-ceEEEEEEeE
Q 026326 224 R-RCHMELNYSF 234 (240)
Q Consensus 224 k-~~hL~~eWsf 234 (240)
+ .-|=.-+|+|
T Consensus 225 kLvMHNKAdY~Y 236 (240)
T 4goj_C 225 RLVMHNKADYSY 236 (240)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEcchhhccc
Confidence 3 2344555554
No 10
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=53.67 E-value=35 Score=25.83 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=26.5
Q ss_pred eeeeeeeeeeEEEEeCCCceEEEEEEeEEEe
Q 026326 207 VLARGLYSAKLKFEDDDRRCHMELNYSFEIK 237 (240)
Q Consensus 207 mLaRG~Y~akSkFvDDDk~~hL~~eWsfeI~ 237 (240)
-|.-|.|++.=+.+-.|||.- +=.|+|.++
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~-~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPI-TGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCE-EEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCcc-CCEEEEEEC
Confidence 477899999999999999988 888898874
No 11
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=43.13 E-value=1.1e+02 Score=23.37 Aligned_cols=77 Identities=22% Similarity=0.326 Sum_probs=46.7
Q ss_pred ccCCeEEEEEEEEEeceeeecce-----------eEEEEE--EcceEeecccccccccCCC--CCC-eeEecCCCCCCce
Q 026326 143 KEGSRFQLKLTFNVMHNIVSGLT-----------YSNTVW--KAGLQVDQSKGMLGTFAPQ--REP-YVHTLEEETTPSG 206 (240)
Q Consensus 143 KEGs~Y~i~i~FkVq~eIVsGLk-----------Y~q~Vk--R~GI~Vdk~e~mlGSY~P~--~e~-Y~~~fp~EeAPSG 206 (240)
+-|...++++ .|.|---+||+ |+|.+. -.|-+|-+. +.+|. .+| ..|.|....+
T Consensus 15 ~~g~~~~vk~--~I~HPMetGl~~d~~g~~IPa~~I~~v~~~~ng~~v~~~-----~~~~~iS~NP~~~F~~~~~~~--- 84 (108)
T 2oxg_Z 15 KAGETVTVKA--LISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDV-----AIDPAVSTNPYFEFDAKVDAA--- 84 (108)
T ss_dssp CTTEEEEEEE--EECCCCBCSCCBCTTSCBCCCBCEEEEEEEETTEEEEEE-----EECTTBCSSCEEEEEEEECSS---
T ss_pred cCCCCEEEEE--EeECCCccccccCcCCCccchHheEEEEEEECCEEEEEE-----EeCCccccCCeEEEEEecCCC---
Confidence 5566665554 68898889866 777653 234333322 33343 245 4555544322
Q ss_pred eeeeeeeeeeEEEEeCCCceEEEEEEeEEE
Q 026326 207 VLARGLYSAKLKFEDDDRRCHMELNYSFEI 236 (240)
Q Consensus 207 mLaRG~Y~akSkFvDDDk~~hL~~eWsfeI 236 (240)
| .++...+|++|+.+ +-++.+.+
T Consensus 85 ----g--~l~v~~~Dn~G~~~-~~~~~i~v 107 (108)
T 2oxg_Z 85 ----G--EFKFTWYDDDGSVY-EDVKPIAV 107 (108)
T ss_dssp ----E--EEEEEEEETTSCEE-EEEEEEEE
T ss_pred ----c--EEEEEEEECCCCEE-EEEEEEEe
Confidence 4 57899999999988 66665554
No 12
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=31.10 E-value=50 Score=24.77 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=26.5
Q ss_pred eeeeeeeeeeEEEEeCCCceEEEEEEeEEEe
Q 026326 207 VLARGLYSAKLKFEDDDRRCHMELNYSFEIK 237 (240)
Q Consensus 207 mLaRG~Y~akSkFvDDDk~~hL~~eWsfeI~ 237 (240)
-|.-|.|++.-+.+-.|||.- +=.|+|.++
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~-~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPI-TGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCE-EEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCcc-CCEEEEEEC
Confidence 577899999999999999988 888888874
No 13
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.03 E-value=81 Score=24.81 Aligned_cols=71 Identities=18% Similarity=0.286 Sum_probs=34.9
Q ss_pred eEEeccCCeEEEEEEEEEeceeeecceeEEEEEE-cceEee--cc----cccccccC--CCCCCeeEecCCCCCCceeee
Q 026326 139 LFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWK-AGLQVD--QS----KGMLGTFA--PQREPYVHTLEEETTPSGVLA 209 (240)
Q Consensus 139 ~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR-~GI~Vd--k~----e~mlGSY~--P~~e~Y~~~fp~EeAPSGmLa 209 (240)
.|+|+.-+.+.+.++|. ||.+|-=.|+. .|-+|- +. .+++++.. |. |.++|...|.. .+.
T Consensus 23 ~ltv~N~s~~~v~l~f~------Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pG-E~~~f~~~w~~----~~~ 91 (120)
T 3isy_A 23 NMSLKNQSERAIEFQFS------TGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESG-ETYDFSDVWKE----VPE 91 (120)
T ss_dssp EEEEEECSSSCEEEEES------SSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTT-CEEEEEEEESS----CCC
T ss_pred EEEEEcCCCCcEEEEeC------CCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCC-CEEEEEEEeCC----CCC
Confidence 44444444445555552 56665555555 555554 22 22455433 43 44555544442 223
Q ss_pred eeeeeeeEEEE
Q 026326 210 RGLYSAKLKFE 220 (240)
Q Consensus 210 RG~Y~akSkFv 220 (240)
=|.|+++-.|.
T Consensus 92 pG~Ytl~a~l~ 102 (120)
T 3isy_A 92 PGTYEVKVTFK 102 (120)
T ss_dssp SEEEEEEEEEC
T ss_pred CccEEEEEEEE
Confidence 36666666654
No 14
>3nkg_A Uncharacterized protein GEBA250068378; GEBA target, BATA-fold, structural genomics, PSI-2, protein initiative; 2.00A {Sulfurospirillum deleyianum}
Probab=27.31 E-value=35 Score=28.87 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=39.4
Q ss_pred CCceEeeC--CCCCCCCCceeEEeccCCeEEEEEEEEEeceeeecceeEEEEEEcceEeecccccccc--cCCCCC
Q 026326 121 FGEITTPL--PIDKNQNGHVLFTLKEGSRFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGT--FAPQRE 192 (240)
Q Consensus 121 r~~i~~~L--~~~~~~k~~~~f~IKEGs~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGS--Y~P~~e 192 (240)
+.||.+|+ +..++--.. .|.|.|--.|.+.+.|.|+...=- .|.--++-..++|+ |.|...
T Consensus 4 ~~pi~~pidlsqagsv~e~-e~~i~e~~~y~l~l~F~v~dr~~~----------~~~d~~r~~~flg~~~y~~~~~ 68 (174)
T 3nkg_A 4 PNPISIPIDLSQAGSVVEK-EVKIEESWSYHLILQFAVHDRKED----------GGLDGKRVWKFLGFNSYDPRDG 68 (174)
T ss_dssp CCCEEEEECTTSTTEEEEE-EEEECSSEEEEEEEEECCCCTTTS----------SSHHHHHHHHHHCSCEECTTTC
T ss_pred CCceeeecChhhCcceeee-eeecccceeeeEEEEEEEccCccc----------ccccHHHHHHhhCCcccCcccc
Confidence 44666665 344444444 899999999999999999764321 12333444557776 777643
No 15
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.28 E-value=2.4e+02 Score=22.19 Aligned_cols=57 Identities=19% Similarity=0.309 Sum_probs=37.6
Q ss_pred eeEEEEEEcceEeec--------ccccccccC---CCCCCeeEecC-CCCCCceeeeeeeeeeeEEEEeCCCceE
Q 026326 165 TYSNTVWKAGLQVDQ--------SKGMLGTFA---PQREPYVHTLE-EETTPSGVLARGLYSAKLKFEDDDRRCH 227 (240)
Q Consensus 165 kY~q~VkR~GI~Vdk--------~e~mlGSY~---P~~e~Y~~~fp-~EeAPSGmLaRG~Y~akSkFvDDDk~~h 227 (240)
.=+|...|+=+--|. -+-.+|.++ |. +.|+|..- .=.+|+| ..+|+|.. +++||..+
T Consensus 42 ~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PG-e~f~YtSg~~L~tp~G-~M~G~y~m----~~~~G~~F 110 (126)
T 1xvs_A 42 QTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKAN-DEYTYSSGTALDTPVG-VMQGQYLM----IDEQGESF 110 (126)
T ss_dssp SCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTT-CEEEEEEEEEESSSEE-EEEEEEEE----ECTTSCEE
T ss_pred CCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCC-CceEEeCCcCcCCCcE-EEEEEEEE----EECCCCEE
Confidence 445666666544342 345688887 54 46777655 3478999 67899996 57888744
No 16
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=25.89 E-value=2.5e+02 Score=22.35 Aligned_cols=57 Identities=19% Similarity=0.266 Sum_probs=36.9
Q ss_pred eeEEEEEEcceEeec--------ccccccccC---CCCCCeeEecC-CCCCCceeeeeeeeeeeEEEEeCCCceE
Q 026326 165 TYSNTVWKAGLQVDQ--------SKGMLGTFA---PQREPYVHTLE-EETTPSGVLARGLYSAKLKFEDDDRRCH 227 (240)
Q Consensus 165 kY~q~VkR~GI~Vdk--------~e~mlGSY~---P~~e~Y~~~fp-~EeAPSGmLaRG~Y~akSkFvDDDk~~h 227 (240)
.=+|...|+=+-.|. -+-.||.++ |. +.|+|..- .=.+|+| ..+|+|.. +++||..+
T Consensus 42 ~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PG-e~F~YtSg~~L~Tp~G-~M~G~y~m----~~~~G~~F 110 (134)
T 1tza_A 42 QAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPN-TAYQYTSGTVLDTPFG-IMYGTYGM----VSESGEHF 110 (134)
T ss_dssp SCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTT-EEEEEEEEEEESSSEE-EEEEEEEE----EETTCCEE
T ss_pred CCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCC-CceEEcCCcCcCCCce-EEEEEEEE----EECCCCEE
Confidence 445666665543342 345678887 54 36777654 3467999 67999996 57788754
No 17
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=24.07 E-value=1.1e+02 Score=22.86 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=28.4
Q ss_pred CCCeeEecCCCCCCceeeeeeeeeeeEEEEeCCCceEEEEEEeEEEee
Q 026326 191 REPYVHTLEEETTPSGVLARGLYSAKLKFEDDDRRCHMELNYSFEIKK 238 (240)
Q Consensus 191 ~e~Y~~~fp~EeAPSGmLaRG~Y~akSkFvDDDk~~hL~~eWsfeI~K 238 (240)
..||.|....- +|.|+++.+=+|+.|+.-.+-.=++.+..
T Consensus 49 ~apy~~~w~~~--------~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 49 EAPYEYEWKAV--------EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SSSEEEEEECC--------SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred cCCEEEEEEcC--------CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 34688765431 69999999999999987655554554443
No 18
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=23.16 E-value=2.9e+02 Score=22.13 Aligned_cols=58 Identities=19% Similarity=0.250 Sum_probs=37.6
Q ss_pred ceeEEEEEEcceEeec--------ccccccccC---CCCCCeeEecC-CCCCCceeeeeeeeeeeEEEEeCCCceE
Q 026326 164 LTYSNTVWKAGLQVDQ--------SKGMLGTFA---PQREPYVHTLE-EETTPSGVLARGLYSAKLKFEDDDRRCH 227 (240)
Q Consensus 164 LkY~q~VkR~GI~Vdk--------~e~mlGSY~---P~~e~Y~~~fp-~EeAPSGmLaRG~Y~akSkFvDDDk~~h 227 (240)
-.=+|...|+=+-.|. -+-.+|.++ |.. .|+|..- .=.+|+| ..+|+|.+ +++||..+
T Consensus 46 ~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe-~F~YtSg~~L~Tp~G-~M~G~y~m----~~~~G~~F 115 (139)
T 1xq4_A 46 SHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGE-TFEYTSGCPLPTPIG-TMRGTYHC----VGENGIPF 115 (139)
T ss_dssp SSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTC-EEEEEEEEEESSSEE-EEEEEEEE----EETTSCEE
T ss_pred CCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCC-ceEEcCCcCcCCCce-EEEEEEEE----EeCCCCEE
Confidence 3446666666544342 355678877 543 6777655 3467999 67999996 47788754
No 19
>3gqq_A Protein UNC-119 homolog A; human retinal protein 4, HRG4, U119A_human, HR3066A, NESG, structural genomics, PSI-2, protein structure initiative; 1.95A {Homo sapiens} PDB: 3rbq_A*
Probab=21.46 E-value=1.2e+02 Score=26.15 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=60.6
Q ss_pred eEEEEEEEEEeceeeecceeEEEEEEcceEeecccccccccCCCCC---CeeEecCCC--CCCceeeeeeeeeeeE---E
Q 026326 147 RFQLKLTFNVMHNIVSGLTYSNTVWKAGLQVDQSKGMLGTFAPQRE---PYVHTLEEE--TTPSGVLARGLYSAKL---K 218 (240)
Q Consensus 147 ~Y~i~i~FkVq~eIVsGLkY~q~VkR~GI~Vdk~e~mlGSY~P~~e---~Y~~~fp~E--eAPSGmLaRG~Y~akS---k 218 (240)
.-.-+|.|.|...+|.++|-+|.++=+|-.+..-.+-.|=-.|++. ...|.+|+= +.=.-| ..+.|..+| .
T Consensus 97 ~V~~~i~Fsvgdkpi~nFRmierhyF~~~llk~~dF~FGFcIP~StNTWE~iye~P~l~~~~i~em-i~~P~et~SDSFY 175 (195)
T 3gqq_A 97 QVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEM-IRHPYETQSDSFY 175 (195)
T ss_dssp EEEEEEEEECCSSCBCSEEEEEEEEETTEEEEEEEEECCCBCTTSEEEEEEEEECCCCCHHHHHHH-HHSTTCEEEEEEE
T ss_pred hhceEEEEeeCCccccccEEEEEEEeCCceeeEEeeeeeeEcCCCCccceeeeecCCCCHHHHHHH-HhCCCccccceeE
Confidence 3455799999877999999999999999999988888888889975 355556621 111112 235666664 3
Q ss_pred EEeCCCceEEEEEEeE
Q 026326 219 FEDDDRRCHMELNYSF 234 (240)
Q Consensus 219 FvDDDk~~hL~~eWsf 234 (240)
||||.=..|=.-+|++
T Consensus 176 FVd~kLvMHNKA~Y~Y 191 (195)
T 3gqq_A 176 FVDDRLVMHNKADYSY 191 (195)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EECCEEEEccceeccc
Confidence 8876555555666654
No 20
>4gbs_A Putative lipoprotein; PF14064 family, transport, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MLY; 2.48A {Bacteroides fragilis}
Probab=21.27 E-value=87 Score=25.57 Aligned_cols=24 Identities=13% Similarity=0.249 Sum_probs=16.7
Q ss_pred eeeeeeEEEE----eCCCceEEEEEEeEE
Q 026326 211 GLYSAKLKFE----DDDRRCHMELNYSFE 235 (240)
Q Consensus 211 G~Y~akSkFv----DDDk~~hL~~eWsfe 235 (240)
|+| ||.+|+ +.+...|++|+|-|-
T Consensus 170 G~Y-aKlq~~syyn~~g~~g~~tF~Y~yp 197 (200)
T 4gbs_A 170 DTM-AAIRLVSYMNAAGIXGYMTFDYIYP 197 (200)
T ss_dssp SCE-EEEEEEEEECTTCCEEEEEEEEESS
T ss_pred CCE-EEEEEEEeECCCCceeeEEEEEEee
Confidence 776 566654 355668999999764
No 21
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=20.38 E-value=1.9e+02 Score=20.21 Aligned_cols=25 Identities=28% Similarity=0.494 Sum_probs=18.7
Q ss_pred eeeeeeeEEEEeCCCceEEEEEEeEE
Q 026326 210 RGLYSAKLKFEDDDRRCHMELNYSFE 235 (240)
Q Consensus 210 RG~Y~akSkFvDDDk~~hL~~eWsfe 235 (240)
-|.|+++.+.+|++|... +..=.+.
T Consensus 58 ~G~Y~v~LtVtd~~G~~~-t~~~~V~ 82 (85)
T 2y72_A 58 AGTYNVTLKVTDDKGATA-TESFTIE 82 (85)
T ss_dssp CEEEEEEEEEEETTSCEE-EEEEEEE
T ss_pred CeEEEEEEEEEECCCCEE-EEEEEEE
Confidence 399999999999998765 4333333
Done!