Query 026327
Match_columns 240
No_of_seqs 117 out of 215
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 10:55:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026327.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026327hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vx8_B Autophagy-related prote 100.0 1.1E-74 3.9E-79 525.3 5.7 202 26-233 5-206 (292)
2 2dyt_A Autophagy-related prote 100.0 6.4E-71 2.2E-75 505.1 1.5 193 5-234 2-204 (312)
3 4ebr_A Ubiquitin-like-conjugat 98.6 8.5E-09 2.9E-13 86.6 2.4 32 197-228 61-92 (169)
4 3vx7_B E2; ubiquitin conjugati 96.3 0.00099 3.4E-08 55.5 0.9 36 198-234 48-83 (152)
5 2lpu_A Kmatg10; autophagy, E2- 94.2 0.0033 1.1E-07 52.3 0.0 28 199-226 49-76 (152)
6 3ndq_A Transcription elongatio 31.9 9.8 0.00034 29.3 0.0 35 4-40 64-98 (108)
7 1h5p_A Nuclear autoantigen SP1 31.1 15 0.00052 28.1 1.0 21 32-54 44-64 (95)
8 1ufn_A Putative nuclear protei 27.4 18 0.00062 27.6 0.8 20 32-53 49-68 (94)
9 2dme_A PHD finger protein 3; P 25.8 16 0.00054 28.6 0.2 35 4-40 63-97 (120)
10 2lw4_A Transcription elongatio 24.2 20 0.00068 27.7 0.5 36 3-40 59-94 (113)
11 1oqj_A Glucocorticoid modulato 23.6 27 0.00093 26.7 1.2 22 30-53 40-61 (97)
12 1vqz_A Lipoate-protein ligase, 22.5 35 0.0012 30.8 1.9 27 31-57 227-253 (341)
13 2dii_A TFIIH basal transcripti 21.3 30 0.001 24.4 0.9 13 28-40 37-49 (61)
14 1x66_A Friend leukemia integra 20.8 24 0.00081 26.7 0.3 49 12-60 38-96 (98)
No 1
>3vx8_B Autophagy-related protein 3; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-74 Score=525.33 Aligned_cols=202 Identities=76% Similarity=1.235 Sum_probs=94.6
Q ss_pred ccccccccCHHHHHHhcccccccCCceecCCCCCCCCCCCCCCCCeeEEecCCcchhhhhhhhhhhhccCCcccccCCCC
Q 026327 26 AFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDN 105 (240)
Q Consensus 26 ~F~etG~LTPeEFV~AGD~LV~kfPTW~W~~gd~~k~k~yLP~dKQfLvTRnVPC~~R~~~~~~e~~~~~e~~~~~~~~d 105 (240)
+|++||+|||||||+||||||||||||||++|+++|+|+|||+||||||||||||+|||++|+++|..+.++++++++++
T Consensus 5 ~F~etG~lTPEEFV~AGD~LV~kfPTW~W~~g~~~k~~~yLP~dKQfLvTRnVPC~~R~~~~~~~~~~~~e~~~~~~d~d 84 (292)
T 3vx8_B 5 AFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDN 84 (292)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHCTTCEEECCCGGGCCTTSCTTCSEEEEEEEEECSCTTC-------------------
T ss_pred ceeeCceeCHHHHHhhhhhhhhcCCCccCCCCCccccccCCCCCCeEEEECCcccHHHhhhhhccccccchhhccccCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999777877777777767778
Q ss_pred CceeecCCCCCCCCCCCccCCCCCchhhhhccccCcccccCCCCCCCCCcCCccCccccCCCCCCccCCCCCCCCCCccc
Q 026327 106 DGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYL 185 (240)
Q Consensus 106 dGWv~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~di~Dm~~~~~~~~~~~~edD~~~~~~~~~ 185 (240)
+|||.||+..... ....+.+++|+...........+.... ..++++++|+||++++++++++ ++|++++.+++.
T Consensus 85 dgWv~t~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~d~~ei~Dmdd~~d~~~~~--~dd~a~~~~~~~ 158 (292)
T 3vx8_B 85 DGWLATHGKPKDK--GKEEDNLPSMDALDINEKNTIQSIPTY--FGGEEDDDIPDMEEFDEADNVV--ENDPATLQSTYL 158 (292)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeecCCccccc--ccccccccccccccccccccccccccc--cccccccccCchhhhhcccccc--ccchhhhccccc
Confidence 9999999743221 123446777765532211111111111 2345688999999998877654 567766544333
Q ss_pred ccCCCCCCCccceeeeEEEEEeeCCCCCceeEEeeecCCCCCcchhhH
Q 026327 186 VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDEVSYLDLHLSW 233 (240)
Q Consensus 186 ~~~~~~~~~i~~~RtYDL~ITYDkyYqTPRmwL~GYde~g~~~~~~~~ 233 (240)
....+++++|+++||||||||||+|||||||||+||+++|+|++--..
T Consensus 159 ~~~~~~~~~i~~~RtYd~~ItYs~~YqtPrLyl~gy~~~g~PL~~ee~ 206 (292)
T 3vx8_B 159 VAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELV 206 (292)
T ss_dssp ----------CCCEEEEEEEEEETTTTEEEEEEEEECTTSCBCCGGGG
T ss_pred cccccCcccccceEEEEEEEEEECCCCCCeEEEEEECCCCCcCCHHHH
Confidence 223334568999999999999999999999999999999987654333
No 2
>2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-71 Score=505.08 Aligned_cols=193 Identities=24% Similarity=0.456 Sum_probs=98.2
Q ss_pred HHHHHHHhhhhhhhccCCCCCccccccccCHHHHHHhcccccccCCceecCCC-CCCCCCCCCCCCCeeEEecCCcchhh
Q 026327 5 QKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG-EPSKRKSYLPADKQFLITRNVPCLRR 83 (240)
Q Consensus 5 ~~l~s~~~~~~eyltPv~~~S~F~etG~LTPeEFV~AGD~LV~kfPTW~W~~g-d~~k~k~yLP~dKQfLvTRnVPC~~R 83 (240)
+.|+|++++||||||||+|+|+|++||+|||||||+||||||||||||||++| +++|+|+|||+||||||||||||+||
T Consensus 2 n~~~s~~~~~~e~ltpv~~~S~F~etG~lTPeEFV~AGD~Lv~k~PTW~W~~~~~~~k~~~yLP~dKQfLiTRnVPC~~R 81 (312)
T 2dyt_A 2 SMIRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNEESSDISYRDFLPKNKQFLIIRKVPCDKR 81 (312)
T ss_dssp ---------------------CHHHHSCCCHHHHHHHHHHHHHHCTTCEECCCCTTBCCCTTSCTTCSCEEEEEEEECSC
T ss_pred hhHHHHHHHHHHHhcCCCCccccccCcccCHHHHHhcchhhhhhCCccccccCCCcccccCCCCCCceEEEecCcccHHH
Confidence 35899999999999999999999999999999999999999999999999855 78999999999999999999999999
Q ss_pred hhhhhhhhhccCCcccc-------cCCCCCceeecC--CCCCCCCCCCccCCCCCchhhhhccccCcccccCCCCCCCCC
Q 026327 84 AASVEEEYEGAGGEILV-------DNEDNDGWLATH--GKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEE 154 (240)
Q Consensus 84 ~~~~~~e~~~~~e~~~~-------~~~~ddGWv~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 154 (240)
|++| +....+++++ ++++++|||.|| +...........++|++|+ +.++
T Consensus 82 ~~~~---~~~~~~~~~~~~~~~~~~~~~~dgWv~t~~~~~~~~~~~~~~~~~i~~~~-------------------~~~d 139 (312)
T 2dyt_A 82 AEQC---VEVEGPDVIMKGFAEDGDEDDVLEYIGSETEHVQSTPAGGTKDSSIDDID-------------------ELIQ 139 (312)
T ss_dssp TTTC------------------------------------------------CHHHH-------------------HHHH
T ss_pred hhhc---cccchhhhhhccccccccccCCCceeeccccccccCcccccccccccccc-------------------cccc
Confidence 9999 3344444443 335678999998 2110000000001111110 0011
Q ss_pred cCCccCccccCCCCCCccCCCCCCCCCCcccccCCCCCCCccceeeeEEEEEeeCCCCCceeEEeeecCCCCCcchhhHH
Q 026327 155 EEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDEVSYLDLHLSWW 234 (240)
Q Consensus 155 ~~di~Dm~~~~~~~~~~~~edD~~~~~~~~~~~~~~~~~~i~~~RtYDL~ITYDkyYqTPRmwL~GYde~g~~~~~~~~~ 234 (240)
+++|+|. ++ ++|++++.... ..+++|.++||||+|||||+|||||||||+||+++|+|+..-..|
T Consensus 140 ~~~~~d~------~~----~~d~~~~~~~~-----~~~~~~~~~rtYd~~ItYs~sYqvPvLyf~gy~~dg~PL~~~e~~ 204 (312)
T 2dyt_A 140 DMEIKEE------DE----NDDTEEFNAKG-----GLAKDMAQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMF 204 (312)
T ss_dssp HHHHC-----------------------------------CCCCEEEEEEEEEETTTTEEEEEEEEEETTCCBCCHHHHH
T ss_pred ccccccc------cc----cCCHHHhhccc-----cccCCccceEEEEEEEEEecCccCCeEEEEeECCCCCCCCHHHHH
Confidence 1222221 10 22322221111 124578999999999999999999999999999999876544433
No 3
>4ebr_A Ubiquitin-like-conjugating enzyme ATG10; autophagy, ligase, protein binding, A ATG5, thiolation; 2.70A {Saccharomyces cerevisiae}
Probab=98.63 E-value=8.5e-09 Score=86.58 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=29.3
Q ss_pred ceeeeEEEEEeeCCCCCceeEEeeecCCCCCc
Q 026327 197 RTRTYDISITYDKYYQTPRVWLTGYDEVSYLD 228 (240)
Q Consensus 197 ~~RtYDL~ITYDkyYqTPRmwL~GYde~g~~~ 228 (240)
+.++||++||||++||||+||++||+++|.+.
T Consensus 61 ~~~~id~~I~Ys~sYqVPvL~f~~~~~~~~~~ 92 (169)
T 4ebr_A 61 LLNHIELYLTYSKVYNEPLLLLRIWEEKSIDG 92 (169)
T ss_dssp CCEEEEEEEEEETTTTEEEEEEEEEEEEEETT
T ss_pred cceEEEEEEEEecccCCcEEEEEEEcCCCCcc
Confidence 56899999999999999999999999998643
No 4
>3vx7_B E2; ubiquitin conjugation; 3.20A {Kluyveromyces marxianus} PDB: 2lpu_A
Probab=96.26 E-value=0.00099 Score=55.50 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=28.5
Q ss_pred eeeeEEEEEeeCCCCCceeEEeeecCCCCCcchhhHH
Q 026327 198 TRTYDISITYDKYYQTPRVWLTGYDEVSYLDLHLSWW 234 (240)
Q Consensus 198 ~RtYDL~ITYDkyYqTPRmwL~GYde~g~~~~~~~~~ 234 (240)
.-+||+.|+||.+||+|.||+..|..+ .+.-.-+||
T Consensus 48 ~~~~e~~I~Ys~~YqvPvL~fR~~~~~-~~~~ie~~~ 83 (152)
T 3vx7_B 48 DTLLELHIYYDHVYHVPSIKFRLWSLD-TEEDISSLR 83 (152)
T ss_dssp TEEEEEEEEECSSSSSEEEEEEEEEEE-ECSSSEEEE
T ss_pred ceEEEEEEEEeccccCceEEEEeecCC-cccchhhhe
Confidence 478999999999999999999999877 333333443
No 5
>2lpu_A Kmatg10; autophagy, E2-like, proteolysis, protein transport; NMR {Kluyveromyces marxianus}
Probab=94.21 E-value=0.0033 Score=52.28 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=25.3
Q ss_pred eeeEEEEEeeCCCCCceeEEeeecCCCC
Q 026327 199 RTYDISITYDKYYQTPRVWLTGYDEVSY 226 (240)
Q Consensus 199 RtYDL~ITYDkyYqTPRmwL~GYde~g~ 226 (240)
=++|+.|+|++.||+|.||+.=|+.++.
T Consensus 49 ~~iE~~I~Y~~~YqVP~L~fRlwe~~~~ 76 (152)
T 2lpu_A 49 TLLELHIYYDHVYHVPSIKFRLWSLDTE 76 (152)
Confidence 4789999999999999999999988873
No 6
>3ndq_A Transcription elongation factor A protein 1; helix bundle; 1.93A {Homo sapiens}
Probab=31.85 E-value=9.8 Score=29.25 Aligned_cols=35 Identities=6% Similarity=0.019 Sum_probs=22.1
Q ss_pred HHHHHHHHhhhhhhhccCCCCCccccccccCHHHHHH
Q 026327 4 QQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVL 40 (240)
Q Consensus 4 ~~~l~s~~~~~~eyltPv~~~S~F~etG~LTPeEFV~ 40 (240)
|.+++|.+.++.+.=.|.++..= -.|.|||++||.
T Consensus 64 k~k~Rsl~fNLKd~kNp~Lr~~v--l~G~isp~~lv~ 98 (108)
T 3ndq_A 64 KNRVRSRISNLKDAKNPNLRKNV--LCGNIPPDLFAR 98 (108)
T ss_dssp HHHHHHHHHHHTCTTCHHHHHHH--HHTSSCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHH--HcCCcCHHHHhC
Confidence 45666666666554445443322 369999999985
No 7
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=31.12 E-value=15 Score=28.08 Aligned_cols=21 Identities=33% Similarity=0.591 Sum_probs=17.3
Q ss_pred ccCHHHHHHhcccccccCCceec
Q 026327 32 VLSVSEFVLAGDNLVSKCPTWSW 54 (240)
Q Consensus 32 ~LTPeEFV~AGD~LV~kfPTW~W 54 (240)
.+||.||+..|-..-.| .|+=
T Consensus 44 w~TP~EFe~~~g~~~sK--dWKr 64 (95)
T 1h5p_A 44 WFTPREFEIEGDRGASK--NWKL 64 (95)
T ss_dssp EECHHHHHHHHTCSTTC--CHHH
T ss_pred EEChHHhhhhcCcccCc--Ccce
Confidence 89999999999887666 6763
No 8
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=27.44 E-value=18 Score=27.60 Aligned_cols=20 Identities=40% Similarity=0.689 Sum_probs=16.9
Q ss_pred ccCHHHHHHhcccccccCCcee
Q 026327 32 VLSVSEFVLAGDNLVSKCPTWS 53 (240)
Q Consensus 32 ~LTPeEFV~AGD~LV~kfPTW~ 53 (240)
.+||.||+.-|-..-.| .|+
T Consensus 49 w~TP~EFe~~~g~~~sK--dWK 68 (94)
T 1ufn_A 49 WLTVKEFLNEGGRATSK--DWK 68 (94)
T ss_dssp EECHHHHHHHHTCTTCS--CHH
T ss_pred EEChHHhhhhcCccccc--Ccc
Confidence 89999999999888666 665
No 9
>2dme_A PHD finger protein 3; PHF3, TFS2M, glioblastoma multiforme, brain tumor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.76 E-value=16 Score=28.59 Aligned_cols=35 Identities=9% Similarity=0.093 Sum_probs=22.8
Q ss_pred HHHHHHHHhhhhhhhccCCCCCccccccccCHHHHHH
Q 026327 4 QQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVL 40 (240)
Q Consensus 4 ~~~l~s~~~~~~eyltPv~~~S~F~etG~LTPeEFV~ 40 (240)
|.++++.+.++.+.=.|.|+.. .-.|.|||++||.
T Consensus 63 k~k~Rsl~fNLKd~kNp~Lr~~--vl~G~i~p~~lv~ 97 (120)
T 2dme_A 63 KNKYRSLMFNLKDPKNNILFKK--VLKGEVTPDHLIR 97 (120)
T ss_dssp HHHHHHHTHHHHSSSCCSHHHH--HHHTSSCTTHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHH--HHcCCCCHHHHhc
Confidence 4566666666665555555433 2369999999985
No 10
>2lw4_A Transcription elongation factor A protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=24.18 E-value=20 Score=27.73 Aligned_cols=36 Identities=3% Similarity=0.043 Sum_probs=23.6
Q ss_pred hHHHHHHHHhhhhhhhccCCCCCccccccccCHHHHHH
Q 026327 3 LQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVL 40 (240)
Q Consensus 3 ~~~~l~s~~~~~~eyltPv~~~S~F~etG~LTPeEFV~ 40 (240)
-|.+++|.+.++.+.=.|.|+.. .-.|.|||++||.
T Consensus 59 Yk~k~Rsl~~NLkd~~Np~Lr~~--vl~G~i~p~~l~~ 94 (113)
T 2lw4_A 59 YKNRVRSRISNLKDAKNPDLRRN--VLCGAITPQQIAV 94 (113)
T ss_dssp HHHHHHHHHHHHHCSSSSHHHHH--HHTTSSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHH--HHcCCCCHHHHhc
Confidence 35566777666665545544433 2379999999985
No 11
>1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1
Probab=23.60 E-value=27 Score=26.70 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=17.0
Q ss_pred ccccCHHHHHHhcccccccCCcee
Q 026327 30 KGVLSVSEFVLAGDNLVSKCPTWS 53 (240)
Q Consensus 30 tG~LTPeEFV~AGD~LV~kfPTW~ 53 (240)
...+||.||+..|-.--.| .|+
T Consensus 40 ~~w~TP~EFe~~~gk~~sK--dWK 61 (97)
T 1oqj_A 40 DQLISPKHFVHLAGKSTLK--DWK 61 (97)
T ss_dssp TEEECHHHHHHHTTCGGGS--CHH
T ss_pred CEEEChHHHhhhcCcCCCC--Ccc
Confidence 3579999999988876666 455
No 12
>1vqz_A Lipoate-protein ligase, putative; class II AARS and biotin synthetases fold, SUFE/NIFU fold, S genomics; HET: MSE; 1.99A {Streptococcus pneumoniae} SCOP: d.224.1.3 d.104.1.3
Probab=22.54 E-value=35 Score=30.76 Aligned_cols=27 Identities=30% Similarity=0.441 Sum_probs=22.1
Q ss_pred cccCHHHHHHhcccccccCCceecCCC
Q 026327 31 GVLSVSEFVLAGDNLVSKCPTWSWESG 57 (240)
Q Consensus 31 G~LTPeEFV~AGD~LV~kfPTW~W~~g 57 (240)
+.||++|+-.+-...-.|+-+|.|.-|
T Consensus 227 ~~lt~~e~~~i~~l~~~ky~s~eW~~g 253 (341)
T 1vqz_A 227 YVFSEEELAEINRIKDTKFGTWDWNYG 253 (341)
T ss_dssp CCCCHHHHHHHHHHHHHTTTCHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCcccccC
Confidence 889999998775544459999999876
No 13
>2dii_A TFIIH basal transcription factor complex P62 subunit; BTF2-P62, general transcription factor IIH polypeptide 1, nuclear protein; NMR {Homo sapiens} SCOP: a.240.1.1
Probab=21.25 E-value=30 Score=24.39 Aligned_cols=13 Identities=31% Similarity=0.284 Sum_probs=10.6
Q ss_pred ccccccCHHHHHH
Q 026327 28 KEKGVLSVSEFVL 40 (240)
Q Consensus 28 ~etG~LTPeEFV~ 40 (240)
--+|+||++||=+
T Consensus 37 V~s~vIse~eFW~ 49 (61)
T 2dii_A 37 VVSQVISAEEFWA 49 (61)
T ss_dssp HTTTSSCHHHHHH
T ss_pred HHhCcCCHHHHHH
Confidence 4579999999954
No 14
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.78 E-value=24 Score=26.69 Aligned_cols=49 Identities=22% Similarity=0.181 Sum_probs=38.5
Q ss_pred hhhhhhhccCCCCCcc-ccccc----cCHHHHHHh-----cccccccCCceecCCCCCC
Q 026327 12 KGTVEKITSHRTVSAF-KEKGV----LSVSEFVLA-----GDNLVSKCPTWSWESGEPS 60 (240)
Q Consensus 12 ~~~~eyltPv~~~S~F-~etG~----LTPeEFV~A-----GD~LV~kfPTW~W~~gd~~ 60 (240)
+.+++|=-+-..-+.| .-+|. +|-|+|+.+ ||.|-.++--|++++.+++
T Consensus 38 W~~~ef~L~~v~~~~F~~m~G~~LC~ls~edF~~~~~~~~GdiL~~hL~~Lk~~~s~~~ 96 (98)
T 1x66_A 38 WAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRESSSGPS 96 (98)
T ss_dssp HHHHHTTCCSCCGGGGTTCCHHHHHHCCHHHHHTTSCHHHHHHHHHHHHHHHTCSSCCC
T ss_pred HHHHhcCCCCCChhhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHHhcCCCCC
Confidence 4556666666678899 78884 999999763 9999999999998866654
Done!