BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026335
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7RX34|THOC7_NEMVE THO complex subunit 7 homolog OS=Nematostella vectensis GN=thoc7
PE=3 SV=1
Length = 205
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 6/187 (3%)
Query: 26 DDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQELSTF 85
DD +I+ RLL + + L K F + D+DN+ +KL L +L+
Sbjct: 3 DDEVIRKRLLIDGEGVGDDRRITTLMKTFVKWCNST--DDDNDASYQKL----LAQLAQC 56
Query: 86 EIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQHKEECE 145
E + K++ V N RE EN+ + +E+ + A +I K L+E+K R++K+E +
Sbjct: 57 EFAMGKTEMVHAMNERETENYEKAYKEVEQSITHAYEEIATCKTNLQEAKRIRRNKQEYD 116
Query: 146 AIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVDELQNT 205
A+ K I P R ET R I++LEK++ +L + LELRKKQF LL++ + ELQ
Sbjct: 117 ALAKEITKHPERQETTRQISELEKDLNSLTETKESLVSKLELRKKQFYLLINTIHELQRM 176
Query: 206 MEEEQKN 212
+++E+ +
Sbjct: 177 IDDEKTD 183
>sp|Q6I9Y2|THOC7_HUMAN THO complex subunit 7 homolog OS=Homo sapiens GN=THOC7 PE=1 SV=3
Length = 204
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K F + ++E + + L
Sbjct: 1 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQ-----YQRMLS 55
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
LS E + K+ V D NLRE EN+ ++ +EI A I + KKQ+ ++K R++
Sbjct: 56 TLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKN 115
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ K+I P R ET + + L KE+ L + LELR+KQF +LL +
Sbjct: 116 RQEYDALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIH 175
Query: 201 ELQNTMEEEQK 211
ELQ T+E ++K
Sbjct: 176 ELQQTLENDEK 186
>sp|Q3SZ60|THOC7_BOVIN THO complex subunit 7 homolog OS=Bos taurus GN=THOC7 PE=2 SV=1
Length = 204
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K F + ++E + + L
Sbjct: 1 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQ-----YQRMLS 55
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
LS E + K+ V D NLRE EN+ ++ +EI A I + KKQ+ ++K R++
Sbjct: 56 TLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKN 115
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ K+I P R ET + + L KE+ L + LELR+KQF +LL +
Sbjct: 116 RQEYDALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIH 175
Query: 201 ELQNTMEEEQK 211
ELQ T+E ++K
Sbjct: 176 ELQQTLENDEK 186
>sp|Q7SZ78|THOC7_XENLA THO complex subunit 7 homolog OS=Xenopus laevis GN=thoc7 PE=2 SV=1
Length = 201
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K F + ++E + + L
Sbjct: 1 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFVKWCNSGSQEEGYSQ-----YQRMLS 55
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
LS E + K+ V D NLRE EN+ ++ +I A I + KKQ+ ++K R++
Sbjct: 56 SLSQCEYSMGKTLLVHDMNLREMENYEKIYVDIESSIAAAHEKIAECKKQILQAKRIRKN 115
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ K+I P R ET + + L+KE+ L LELR+KQF +LL +
Sbjct: 116 RQEYDALAKVIEQHPDRHETLKQLEALDKELKQLSHTKENAEDKLELRRKQFHVLLSTIH 175
Query: 201 ELQNTMEEEQK 211
ELQ T+E + K
Sbjct: 176 ELQQTLENDDK 186
>sp|Q7TMY4|THOC7_MOUSE THO complex subunit 7 homolog OS=Mus musculus GN=Thoc7 PE=1 SV=2
Length = 204
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K F + ++E + + L
Sbjct: 1 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQ-----YQRMLS 55
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
LS E + K+ V D NLRE EN+ ++ +EI A I + KKQ+ ++K R++
Sbjct: 56 TLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKN 115
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ K+I P R ET + + L KE+ L + LELR+KQF +LL +
Sbjct: 116 RQEYDALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIH 175
Query: 201 ELQNTMEEEQK 211
ELQ T+E + K
Sbjct: 176 ELQQTLENDDK 186
>sp|Q6P643|THOC7_XENTR THO complex subunit 7 homolog OS=Xenopus tropicalis GN=thoc7 PE=2
SV=1
Length = 199
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K F + ++ + E + L
Sbjct: 1 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFLKWC-------NSGSQEEGQYQRMLS 53
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
LS E + K+ V D NLRE EN+ ++ +I A I + KKQ+ ++K R++
Sbjct: 54 SLSQCEFSMGKTLLVHDMNLREMENYEKIYVDIESSIAAAHEKIAECKKQILQAKRIRKN 113
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ K+I P R ET + + L+KE+ L LELR+KQF +LL +
Sbjct: 114 RQEYDALAKVIQQHPDRHETLKQLEALDKELKQLSHTKENVEDKLELRRKQFHVLLSTIH 173
Query: 201 ELQNTMEEEQK 211
ELQ T+E + K
Sbjct: 174 ELQQTLENDDK 184
>sp|Q6DGZ3|THOC7_DANRE THO complex subunit 7 homolog OS=Danio rerio GN=thoc7 PE=2 SV=1
Length = 202
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
Query: 21 FGPHEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQ 80
G DD +I+ RLL + + L K FT + E+ + +++ +
Sbjct: 1 MGSITDDEVIRKRLLIDGDGAGDDRRINVLMKSFTKWCHSSFSPEEGMSQYQRM----MM 56
Query: 81 ELSTFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQH 140
L+ E + K+ V + NL+E EN+ + +I + A I + KK+++ +K R++
Sbjct: 57 SLAQCEFSMGKTLLVYNMNLKEMENYEGIYTDIEKSIASAHEKIAECKKEIQRAKRIRKN 116
Query: 141 KEECEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVD 200
++E +A+ ++I P R ET + + L+K++ L LELRKKQF +LL +
Sbjct: 117 RQEYDALARVIKQHPDRHETLKQLEALDKDLQQLSHIKENVEDKLELRKKQFHVLLTTIQ 176
Query: 201 ELQNTMEEEQK 211
ELQ T+E ++K
Sbjct: 177 ELQQTLENDEK 187
>sp|Q8IRJ8|THOC7_DROME THO complex protein 7 OS=Drosophila melanogaster GN=thoc7 PE=1 SV=2
Length = 288
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 26 DDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDEDNNNDCEKLAKAFLQELSTF 85
D+ IIK RLL T + + L K+F + D+ + + + + +
Sbjct: 23 DEEIIKQRLLIDGDGTGEDRRIVVLLKQFLKWA------SDSLDSNPIMYDRLMAQFAQC 76
Query: 86 EIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQHKEECE 145
++ LK+ + E++N+ +L E + AKA+IE KK+L +K R++K E +
Sbjct: 77 KLTALKNVQTLQMIAGERDNYTQLVEHHEESIVLAKAEIESSKKELITAKQIRKNKMEYD 136
Query: 146 AIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVDELQNT 205
+ LI QP RSETQR I + +EI L + R + R+ F LL++ + EL+
Sbjct: 137 LLASLIQDQPDRSETQRHIETIRREIDDLVQKKLKMERKFQKRRNDFTLLMYTIHELEQQ 196
Query: 206 MEEE 209
++++
Sbjct: 197 LDQD 200
>sp|Q552L5|THOC7_DICDI THO complex subunit 7 homolog OS=Dictyostelium discoideum GN=thoc7
PE=3 SV=1
Length = 215
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 25 EDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV-LEIEKDEDNNNDCEKLAKAFLQELS 83
E+D K++++ + +KK+ KK+ F+ + +E+++ D + L + E
Sbjct: 11 EEDSFFKNKIVFKNFV------IKKVFKKYLQFINVTTGNNENSSVDLQSLCTQLINEFG 64
Query: 84 TFEIPLLKSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQHKEE 143
E+ + K++ + + E + +L ++ + K +I LK+ L+ K +RQ+KE+
Sbjct: 65 HLELSVQKAQTISETCTDETLYYQQLSKQREIEIENEKKEIAILKETLDYEKKQRQYKEQ 124
Query: 144 CEAIRKLIAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALLLHVVDELQ 203
A+ K I +P +T++ I +KE+ + + + LELR KQF LLLH ++EL+
Sbjct: 125 YLALYKAINEKPSTEQTEKEIEKAQKELNEITDQTNKTTSKLELRTKQFQLLLHTLNELE 184
Query: 204 NTMEE 208
++E
Sbjct: 185 KNLDE 189
>sp|A4IFI1|CC157_BOVIN Coiled-coil domain-containing protein 157 OS=Bos taurus GN=CCDC157
PE=2 SV=2
Length = 688
Score = 30.8 bits (68), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 91 KSKAVIDANLREKENFNELKEEINRQTLQAKADIEDLKKQLEESKIERQHKEECEAIRKL 150
K KA +D+ +R +E+ + + +Q + E+L+ L+E++ +R H EE +L
Sbjct: 425 KEKARVDSMVRHQESLQAKQRALLQQLDSLDQEREELRGSLDEAEAQRAHVEE-----QL 479
Query: 151 IAVQPPRSETQRIITDLEKEIAALEAENTAGSRLLELRKKQFALL 195
+VQ E ++ TDL I+ LE E L+ELR+++ L+
Sbjct: 480 QSVQ---GEREQATTDLRLTISELERE------LVELRERERLLV 515
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,498,609
Number of Sequences: 539616
Number of extensions: 3559113
Number of successful extensions: 23826
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 1693
Number of HSP's that attempted gapping in prelim test: 20076
Number of HSP's gapped (non-prelim): 4501
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)