BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026342
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYN9|MENB_ARATH 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis
thaliana GN=MENB PE=1 SV=2
Length = 337
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/235 (71%), Positives = 196/235 (83%), Gaps = 4/235 (1%)
Query: 4 QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNAS-MNDSYHRIHGEVPSHDVVWR---I 59
++ SA RR++ V NHL+P+ S + + + L +AS M+D +H++HGEVP+H+VVW+
Sbjct: 6 ELGSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVVWKKTDF 65
Query: 60 ACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
+ EF DIIYEKA+ EGIAKITINRP+RRNAFRP TVKEL+RAFNDARDDSSVGVI
Sbjct: 66 FGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVI 125
Query: 120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGG 179
ILTGKGT+AFCSGGDQALRT+DGYAD + GRLNVLDLQVQIRRLPKPVIAMVAGYAVGG
Sbjct: 126 ILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGG 185
Query: 180 GHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGLKK 234
GH+LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV + W + +
Sbjct: 186 GHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTR 240
>sp|Q9CLV5|MENB_PASMU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Pasteurella multocida
(strain Pm70) GN=menB PE=3 SV=1
Length = 285
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 137/184 (74%), Gaps = 3/184 (1%)
Query: 51 PSHDVVWR-IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFND 109
P DV++ I + +TDI+Y K++ +GIAKITINRP+ RNAFRP TVKE+I+AF D
Sbjct: 4 PKDDVLYAPIEWQDHSEGYTDILYHKSL-DGIAKITINRPEVRNAFRPQTVKEMIQAFAD 62
Query: 110 ARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPV 168
AR D +GVI+LTG+G +AFCSGGDQ +R GY D LNVLD Q IR PKPV
Sbjct: 63 ARFDEQIGVIVLTGQGEKAFCSGGDQKVRGDYGGYQDESGVHHLNVLDFQRDIRTCPKPV 122
Query: 169 IAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCL 228
+AMVAGYA+GGGHVLHM+CDLTIAADNAIFGQTGPKVGSFD G+G+S M+R+V +
Sbjct: 123 VAMVAGYAIGGGHVLHMICDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKARE 182
Query: 229 WWGL 232
W L
Sbjct: 183 IWFL 186
>sp|P0ABU0|MENB_ECOLI 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli (strain
K12) GN=menB PE=1 SV=1
Length = 285
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 135/191 (70%), Gaps = 11/191 (5%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTV 224
PKPV+AMVAGY++GGGHVLHM+CDLTIAADNAIFGQTGPKVGSFD G+G+S M+R+V
Sbjct: 119 PKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQK 178
Query: 225 QQCLWWGLKKH 235
+ W L +
Sbjct: 179 KAREIWFLCRQ 189
>sp|P0ABU1|MENB_ECOL6 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=menB PE=3 SV=1
Length = 285
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 135/191 (70%), Gaps = 11/191 (5%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTV 224
PKPV+AMVAGY++GGGHVLHM+CDLTIAADNAIFGQTGPKVGSFD G+G+S M+R+V
Sbjct: 119 PKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQK 178
Query: 225 QQCLWWGLKKH 235
+ W L +
Sbjct: 179 KAREIWFLCRQ 189
>sp|Q7CQ56|MENB_SALTY 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=menB PE=1 SV=1
Length = 285
Score = 214 bits (544), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 137/191 (71%), Gaps = 11/191 (5%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E +TDI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---YTDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D +VGVIILTG+G +AFC+GGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTV 224
PKPV+AMVAGY++GGGHVLHM+CDLTIAA+NAIFGQTGPKVGSFD G+G+S M+R+V
Sbjct: 119 PKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQK 178
Query: 225 QQCLWWGLKKH 235
+ W L +
Sbjct: 179 KAREIWFLCRQ 189
>sp|P44960|MENB_HAEIN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=menB PE=3
SV=1
Length = 285
Score = 214 bits (544), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 129/166 (77%), Gaps = 2/166 (1%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
++DI Y K+ +GIAKITINRP+ RNAFRP TVKE++ AF+DAR D ++GVI+LTG+G +
Sbjct: 22 YSDIRYHKST-DGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEK 80
Query: 128 AFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
AFCSGGDQ +R GY D LNVLD Q IR PKPV+AMVAGYA+GGGHVLHM+
Sbjct: 81 AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIRSCPKPVVAMVAGYAIGGGHVLHML 140
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
CDLTIAA+NAIFGQTGPKVGSFD G+G+S M+RLV + W L
Sbjct: 141 CDLTIAAENAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWFL 186
>sp|P23966|MENB_BACSU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Bacillus subtilis (strain
168) GN=menB PE=1 SV=2
Length = 271
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 125/165 (75%), Gaps = 2/165 (1%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ +I+YE GIAKITINRP+ NAF P TV E+I AF DARDD +VGVI+L G G +
Sbjct: 10 YDEILYETY--NGIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDK 67
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVC 187
AFCSGGDQ +R GY + RLNVLDLQ IR +PKPV+AMV+GYA+GGGHVLH+VC
Sbjct: 68 AFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMVSGYAIGGGHVLHIVC 127
Query: 188 DLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
DLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 128 DLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 172
>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3
SV=1
Length = 272
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 129/170 (75%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 6 ETLREYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G +AFCSGGDQ R GY ++ RLNVLDLQ IR +PKPVIAMV GYA+GGG+V
Sbjct: 64 GEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNV 123
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 124 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 173
>sp|Q4L549|MENB_STAHJ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1
Length = 272
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 128/170 (75%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD ++ VIILT
Sbjct: 6 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G +AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYA+GGG+V
Sbjct: 64 GEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNV 123
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 124 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 173
>sp|Q49WG8|MENB_STAS1 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=menB PE=3 SV=1
Length = 272
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 130/170 (76%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE + +GIAK+TINRP+ RNAF P+TV+E+I AF ARDD + VIILT
Sbjct: 6 ETIREYKEIKYE--LYDGIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G +AFCSGGDQ +R GY + RLNVLDLQ IR +PKPV+AMV GYA+GGG+V
Sbjct: 64 GEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMVRGYAIGGGNV 123
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 124 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 173
>sp|Q8NXA0|MENB_STAAW 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MW2) GN=menB PE=3 SV=1
Length = 273
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q6GAG7|MENB_STAAS 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MSSA476) GN=menB PE=3 SV=1
Length = 273
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G
Sbjct: 10 EYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGD 67
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
+AFCSGGDQ R GY ++ RLNVLDLQ IR +PKPVIAMV GYA+GGG+VL++V
Sbjct: 68 KAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVV 127
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
CDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 128 CDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 173
>sp|Q7A6A9|MENB_STAAN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain N315) GN=menB PE=1 SV=1
Length = 273
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q99V48|MENB_STAAM 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=menB PE=1 SV=1
Length = 273
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q6GI37|MENB_STAAR 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MRSA252) GN=menB PE=3 SV=1
Length = 273
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q5HH38|MENB_STAAC 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain COL) GN=menB PE=1 SV=1
Length = 273
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGL 232
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+V + W L
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYL 174
>sp|Q9TM10|MENB_CYACA 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Cyanidium caldarium
GN=menB PE=3 SV=1
Length = 268
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 126/165 (76%), Gaps = 3/165 (1%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
+F DI Y K + I++I I+RP NAFRP T+ E+I AF D+R+DSS+GV+IL+G G+
Sbjct: 8 DFIDIKYIKQ--DQISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVILSGHGS 65
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
AFC GGDQ +R++ GY D + LNVL+LQ IR PKPVIA V+GYAVGGG +L+M+
Sbjct: 66 RAFCVGGDQKIRSKTGYIDEKGRSSLNVLELQRIIRTFPKPVIAKVSGYAVGGGQILNMM 125
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQ-QCLWW 230
CDLTIA++NA+ GQ+GPKVGSFDAGYGS+ M+R++ + + LW+
Sbjct: 126 CDLTIASENAVLGQSGPKVGSFDAGYGSAYMARIIGQKKARELWF 170
>sp|O06414|MENB_MYCTU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium
tuberculosis GN=menB PE=1 SV=1
Length = 314
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 112/188 (59%), Gaps = 19/188 (10%)
Query: 51 PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
P WR+ + + TDI Y + V + ++ NRP+ RNAFRPHTV EL R + A
Sbjct: 19 PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 76
Query: 111 RDDSSVGVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNV 154
R VGV++LTG G AFCSGGDQ +R R GY D GRL++
Sbjct: 77 RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 136
Query: 155 LDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYG 213
L++Q IR +PK VI +V G+A GGGH LH+VCDLT+A+ + A F QT VGSFD GYG
Sbjct: 137 LEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYG 196
Query: 214 SSIMSRLV 221
S+ ++R V
Sbjct: 197 SAYLARQV 204
>sp|A0QRD3|MENB_MYCS2 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=menB PE=1 SV=1
Length = 309
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 108/174 (62%), Gaps = 21/174 (12%)
Query: 67 EFTDIIYEKAVGEG----IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
+ TDI Y + V +G ++ +RP+ RNAFRPHTV EL R + AR S VGVI+LT
Sbjct: 24 DLTDITYHRHVLDGARQPTVRVAFDRPEVRNAFRPHTVDELYRVLDHARMSSDVGVILLT 83
Query: 123 GKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQIRRLPK 166
G G AFCSGGDQ +R R GY D GRL++L++Q IR +PK
Sbjct: 84 GNGPSPKDGGWAFCSGGDQRIRGRTGYQYASGETAETVDPARAGRLHILEVQRLIRFMPK 143
Query: 167 PVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYGSSIMSR 219
VI +V G+A GGGH LH+ CDLT+A+ ++A F QT VGSFD G+GS+ ++R
Sbjct: 144 VVICLVNGWAAGGGHSLHVTCDLTLASREHARFKQTDADVGSFDGGFGSAYLAR 197
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
IT+NRPD+ NA ++EL RA + A D + VII+TGKG +AFC+G D +
Sbjct: 17 ITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKG-KAFCAGADITQFNQLTP 75
Query: 144 ADYENFGRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQT 201
A+ F + ++D +I L KP IAM+ GYA+GGG L + CD+ IAA+ A G
Sbjct: 76 AEAWKFSKKGREIMD---KIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLP 132
Query: 202 GPKVGSFDAGYGSSIMSRLV 221
+G + G+ ++R++
Sbjct: 133 EINLGIYPGYGGTQRLTRVI 152
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 13/160 (8%)
Query: 67 EFTDIIYEKAVGEG-IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
E ++I EK EG +A +TINRP NA T+KE+ + +DS V +ILTG G
Sbjct: 2 ELNNVILEK---EGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAG 58
Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQV--QIRRLPKPVIAMVAGYAVGGGHVL 183
++F +G D + + FG +L +V ++ L KPVIA V G+A+GGG +
Sbjct: 59 EKSFVAGADISEMKEMNTIEGRKFG---ILGNKVFRRLELLEKPVIAAVNGFALGGGCEI 115
Query: 184 HMVCDLTIAADNAIFGQTGPKVG-SFDAGY-GSSIMSRLV 221
M CD+ IA+ NA FGQ P+VG G+ G+ +SRLV
Sbjct: 116 AMSCDIRIASSNARFGQ--PEVGLGITPGFGGTQRLSRLV 153
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA ++EL +A +D +VG I+LT
Sbjct: 29 SGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G G +AF +G D + D + L+ D I R+ KPVIA V GYA+GGG
Sbjct: 89 G-GEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVNGYALGGGCE 144
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ A + A FGQ +G+ G+ ++R V
Sbjct: 145 LAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAV 183
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA ++EL +A D +VG I+LT
Sbjct: 29 SGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G G +AF +G D + D + L+ D I R+ KPVIA V GYA+GGG
Sbjct: 89 G-GDKAFAAGADIKEMQNRTFQDCYSSKFLSHWD---HITRVKKPVIAAVNGYALGGGCE 144
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ A + A FGQ +G+ G+ ++R V
Sbjct: 145 LAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAV 183
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 57 WRIA----CDESGTEFTDIIYEKAV---GEGIAKITINRPDRRNAFRPHTVKELIRAFND 109
WR + C T T I +A+ +GI +I +NRP+ RNA V EL+ A
Sbjct: 15 WRFSGARDCASHATTRTPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQ 74
Query: 110 ARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLD-LQVQIRRLPKPV 168
R+D V V++ FC+G D L+ R+ +D E + L L +I P P
Sbjct: 75 LREDQQVRVLLFRSAVKGVFCAGAD--LKEREQMSDVEVGTFVQRLRGLMSEIAAFPVPT 132
Query: 169 IAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVSTVQQCL 228
IA + G+A+GGG L + CDL IAA +A+ G G G+ + R CL
Sbjct: 133 IAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPR-------CL 185
Query: 229 WWGLKKHV 236
L K +
Sbjct: 186 GVALAKEL 193
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I+ E+ GI IT+NRP NA + E+ A + DD +G II+TG +
Sbjct: 3 YETILVERDQRVGI--ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-K 59
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
AF +G D +AD + +G+L + P IA VAGYA+GGG
Sbjct: 60 AFAAGADIKEMADLTFADAFTADFFATWGKLAAVR---------TPTIAAVAGYALGGGC 110
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ IAAD A FGQ K+G GS ++R +
Sbjct: 111 ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAI 150
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I+ E+ GI IT+NRP NA + E+ A + DD +G II+TG +
Sbjct: 3 YETILVERDQRVGI--ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-K 59
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
AF +G D +AD + +G+L + P IA VAGYA+GGG
Sbjct: 60 AFAAGADIKEMADLTFADAFTADFFATWGKLAAVR---------TPTIAAVAGYALGGGC 110
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ IAAD A FGQ K+G GS ++R +
Sbjct: 111 ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAI 150
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
I +K + I +NRP NA + EL +A +D +VG I+LTG G + F
Sbjct: 37 ITAKKGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTG-GEKVFA 95
Query: 131 SGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
+G D Q+L ++ Y+ G L+ D Q+ R+ KPVIA V GYA+GGG L M+
Sbjct: 96 AGADIKEMQSLTFQNCYSG----GFLSHWD---QLTRVKKPVIAAVNGYALGGGCELAMM 148
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
CD+ A + A FGQ +G+ G+ ++R V
Sbjct: 149 CDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAV 183
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA + EL +A +D +VG I+LT
Sbjct: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G G +AF +G D + D + L D Q++ KPVIA V GYA GGG
Sbjct: 89 G-GDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVK---KPVIAAVNGYAFGGGCE 144
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ A + A F Q +G+ G+ ++R V
Sbjct: 145 LAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAV 183
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA + EL +A +D +VG I+LT
Sbjct: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G G +AF +G D + D + L D QI+ KPVIA V GYA GGG
Sbjct: 89 G-GDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQIK---KPVIAAVNGYAFGGGCE 144
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLV 221
L M+CD+ A + A F Q +G+ G+ ++R V
Sbjct: 145 LAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTV 183
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+GIA+I +NRP RNA V +L+ A R+D V V+I FC+G D R
Sbjct: 44 QGIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKER 103
Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
+ A+ F + + L +I P P IA + G+A+GGG L + CDL +AA +A+
Sbjct: 104 EQMSEAEVGLFVQ-RLRGLMTEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVM 162
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGLKKHV 236
G G G+ + R CL L K +
Sbjct: 163 GLIETTRGLLPGAGGTQRLPR-------CLGVALAKEL 193
>sp|O69762|HCHL_PSEFL Hydroxycinnamoyl-CoA hydratase-lyase OS=Pseudomonas fluorescens
PE=1 SV=1
Length = 276
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFG 199
AD A FG
Sbjct: 134 ADEATFG 140
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
+T+NRP NA + E+ A ++D VG II+TG +AF +G D +
Sbjct: 37 VTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITG-SEKAFAAGADIKEMEKVTL 95
Query: 144 AD-YENFGRLNVLDLQVQ---IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFG 199
D Y N DL Q + ++ KP+IA V GYA+GGG L M+CD+ IA + A+FG
Sbjct: 96 PDAYNN-------DLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFG 148
Query: 200 QTGPKVGSFDAGYGSSIMSRLV 221
Q K+G+ G+ + R +
Sbjct: 149 QPEIKLGTIPGCGGTQRLIRAI 170
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
E +A IT+NRP NA ++ L + +S++ +ILTG G +AFC+G D L+
Sbjct: 12 EHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGAD--LK 69
Query: 139 TRDGYADYENFGRLNVLDLQVQIR-RLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
R + + ++++ + LP+PVIA + G A+GGG L + CDL IA + A+
Sbjct: 70 ERIKLKEDQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAV 129
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLV 221
G + G+ + RL+
Sbjct: 130 LGLPETGLAIIPGAGGTQRLPRLI 153
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 16/144 (11%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----QALRT 139
IT+NRP NA + E+ A + D VG I++TG + F +G D +L
Sbjct: 17 ITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGS-PKVFAAGADIKEMASLTF 75
Query: 140 RDGY-ADY-ENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
D + AD+ +G+L + P+IA VAGYA+GGG L M+CDL IAAD A
Sbjct: 76 TDAFDADFFSAWGKLAAVR---------TPMIAAVAGYALGGGCELAMMCDLLIAADTAK 126
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLV 221
FGQ K+G GS ++R +
Sbjct: 127 FGQPEIKLGVLPGMGGSQRLTRAI 150
>sp|P64014|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis
GN=echA6 PE=1 SV=1
Length = 243
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQAL 137
E + I + RP+RRNA V+EL +A A D S I+LTG+GT AFC+G D
Sbjct: 7 AEAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD--- 61
Query: 138 RTRDGYA-DYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
+ D +A DY + +++L + P PV+ + G A+G G L M CDL + A +A
Sbjct: 62 LSGDAFAADYPD----RLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDA 117
Query: 197 IFGQTGPKVG 206
F K G
Sbjct: 118 FFQFPTSKYG 127
>sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1
Length = 243
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQAL 137
E + I + RP+RRNA V+EL +A A D S I+LTG+GT AFC+G D
Sbjct: 7 AEAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD--- 61
Query: 138 RTRDGYA-DYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
+ D +A DY + +++L + P PV+ + G A+G G L M CDL + A +A
Sbjct: 62 LSGDAFAADYPD----RLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDA 117
Query: 197 IFGQTGPKVG 206
F K G
Sbjct: 118 FFQFPTSKYG 127
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 70 DIIYEKAVGE--GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
++I + VGE +A I +NRP NA + EL A D SVG I++TG
Sbjct: 32 EMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITG-SER 90
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVC 187
AF +G D T + +A F + L + + KPVIA V G+A+GGG+ L M+C
Sbjct: 91 AFAAGADIKEMTNNEFAT--TFSG-SFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMC 147
Query: 188 DLTIAADNAIFGQTGPKVGSFDAGYGSSIMSR 219
D+ A + A FGQ +G+ G+ +R
Sbjct: 148 DIIYAGEKARFGQPEINIGTIPGAGGTQRWAR 179
>sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Homo sapiens GN=ECHDC2 PE=2 SV=2
Length = 292
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+GI +I +NRP RNA V EL+ R+D V V++ FC+G D R
Sbjct: 40 QGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKER 99
Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
+ A+ F + + L I P P IA + G+A+GGG L + CDL +AA +A+
Sbjct: 100 EQMSEAEVGVFVQ-RLRGLMNDIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVM 158
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVSTVQQCLWWGLKKHV 236
G G G+ + R CL L K +
Sbjct: 159 GLIETTRGLLPGAGGTQRLPR-------CLGVALAKEL 189
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----QALRT 139
IT+NRP NA ++EL A D +VG I+L G +AF +G D Q L
Sbjct: 17 ITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGS-EKAFAAGADIKEMQGLDF 75
Query: 140 RDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
DGY AD+ L + KP+IA V+G+A+GGG L M+CD IA++ A F
Sbjct: 76 VDGYLADF--------LGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKF 127
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVSTVQ 225
GQ +G GS ++R V +
Sbjct: 128 GQPEITLGVIPGMGGSQRLTRAVGKAK 154
>sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain
TN) GN=echA6 PE=3 SV=1
Length = 247
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARD-DSSVG--VIILTGKGTEAFCSGGD 134
EG+ I + RP+RRNA +++L A A DS V VI+LTG+GT FC+G D
Sbjct: 7 AEGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGT-VFCAGAD 65
Query: 135 QALRTRDGYA-DYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA 193
+ D +A DY + +++L + +P PVI + G A+G G L M CDL + A
Sbjct: 66 ---LSGDAFAADYPD----RLIELHRVMDAVPMPVIGAINGPAIGAGLQLAMQCDLRVVA 118
Query: 194 DNAIFGQTGPKVG 206
+A F K G
Sbjct: 119 PDAYFQFPTSKYG 131
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRV 179
>sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3
SV=3
Length = 261
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRV 179
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRV 179
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRV 179
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRV 179
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRV 179
>sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=caiD PE=3 SV=1
Length = 261
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
I +IT++RP + NA T E+ F + RDD + V I+TG G + F +G D
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L +I L KPVIA V GYA GGG L + D + ADNA F
Sbjct: 71 EGEAPDADFGPGGFAGL-TEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 201 TGPKVGSF-DAG--------YGSSIMSRLVST-----VQQCLWWGLKKHV 236
K+G D+G +I++ +V T ++ L WG+ V
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRV 179
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+ +I ++RP + NA T E+ F RDD S+ V I+TG G FC+G D
Sbjct: 13 VLEIILDRP-KANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L ++ L KPVIA + GYA GGG L + D+ I +DNA F
Sbjct: 71 EGEAPDADFGAGGFAGL-TELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFAL 129
Query: 201 TGPKVGSF-DAGYGSSIMSRLVSTV-------------QQCLWWGLKKHV 236
++G D+G + RL + Q+ L WG+ V
Sbjct: 130 PEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRV 179
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+ +I ++RP + NA T E+ F RDD S+ V I+TG G FC+G D
Sbjct: 13 VLEIILDRP-KANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLK-AAA 70
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+G A +FG L ++ L KPVIA + GYA GGG L + D+ I +DNA F
Sbjct: 71 EGEAPDADFGAGGFAGL-TELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFAL 129
Query: 201 TGPKVGSF-DAGYGSSIMSRLVSTV-------------QQCLWWGLKKHV 236
++G D+G + RL + Q+ L WG+ V
Sbjct: 130 PEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRV 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,137,055
Number of Sequences: 539616
Number of extensions: 3906734
Number of successful extensions: 9075
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 8629
Number of HSP's gapped (non-prelim): 374
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)