BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026343
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis
thaliana GN=At3g61080 PE=1 SV=2
Length = 326
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/240 (82%), Positives = 218/240 (90%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+ G+KLAEM
Sbjct: 87 MFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAELGRKLAEM 146
Query: 61 HKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 120
HKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGDS IYQ+G
Sbjct: 147 HKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGDSAIYQKG 206
Query: 121 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA 180
H L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+FGMSWCA
Sbjct: 207 HTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEADFGMSWCA 266
Query: 181 GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 240
GFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 267 GFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLKA 326
>sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os03g0117800 PE=2 SV=1
Length = 342
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 193/240 (80%), Positives = 217/240 (90%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS G+KLAEM
Sbjct: 103 MFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAEM 162
Query: 61 HKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 120
HKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L ++GDS IY +G
Sbjct: 163 HKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDKG 222
Query: 121 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA 180
RL++N+ PLFEG +EPCLLHGDLWSGNISSD NGEPVILDPACYYGHNEAEFGMSWCA
Sbjct: 223 QRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTNGEPVILDPACYYGHNEAEFGMSWCA 282
Query: 181 GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 240
GFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 283 GFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLKA 342
>sp|A2XBT1|FN3KR_ORYSI Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp.
indica GN=OsI_09747 PE=3 SV=1
Length = 342
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 217/240 (90%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS G+KLAEM
Sbjct: 103 MFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAEM 162
Query: 61 HKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 120
HKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L ++GDS IY +G
Sbjct: 163 HKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDKG 222
Query: 121 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA 180
RL++N+ PLFEG +EPCLLHGDLWSGNISSD +GEPVILDPACYYGHNEAEFGMSWCA
Sbjct: 223 QRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTDGEPVILDPACYYGHNEAEFGMSWCA 282
Query: 181 GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 240
GFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 283 GFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLKA 342
>sp|P74594|Y1563_SYNY3 Uncharacterized protein slr1563 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1563 PE=3 SV=1
Length = 295
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 156/245 (63%), Gaps = 19/245 (7%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF---GKKL 57
MF+ EALGL AM T+TIR PRP G+ G SY+++E++EFG RGN + G+ L
Sbjct: 62 MFQAEALGLEAMAATQTIRVPRPICHGS-SAGHSYLVLEWLEFG--RGNHDSWYRMGQNL 118
Query: 58 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD---- 113
A +H+AG S++ FG+ DNTIG+TPQ N WT +W +F+AEHRLGYQL LA + G+
Sbjct: 119 AALHQAGGSAQ-FGWQTDNTIGATPQPNPWTDSWADFFAEHRLGYQLALARRRAGNFPDP 177
Query: 114 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 173
+ + + +L+ + P P L+HGDLWSGN + GEPVILDPA YYG E +
Sbjct: 178 AVVVPKVKQLLGDRQP-------TPALVHGDLWSGNGAILTTGEPVILDPATYYGDGEVD 230
Query: 174 FGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIID 232
M+ GF +FY Y + P +PG+++R+ LY LYH LNH+NLFG GY+ A ++
Sbjct: 231 LAMTELFGGFPAAFYQGYHSISPAEPGYQQRKILYNLYHILNHFNLFGGGYQQQAQQMLK 290
Query: 233 DYLRM 237
LR+
Sbjct: 291 QCLRI 295
>sp|Q8K274|KT3K_MOUSE Ketosamine-3-kinase OS=Mus musculus GN=Fn3krp PE=2 SV=2
Length = 309
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 25/255 (9%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGE L A+ +T T++ P+P KV P GGS ++ME ++ + + G +LA++
Sbjct: 51 MFEGEMASLTAILKTGTVKVPKPIKVVDAPGGGSMLVMEHLDMRYLSSHATKLGTQLADL 110
Query: 61 H------------KAGKSSKG-----------FGFDVDNTIGSTPQINKWTSNWIEFYAE 97
H +AG KG FGFDV G PQ+N W NW+EFYA
Sbjct: 111 HLENKRLGERLLKEAGTVGKGGEQAERQYVDQFGFDVVTCCGYLPQVNDWQKNWVEFYAR 170
Query: 98 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 157
R+ Q+ + + GD + L + LF + + P LLHGDLW GN++ D +G
Sbjct: 171 QRIQPQMDMVEKKSGDREALELWSALQLKIPDLFRDLEIVPALLHGDLWGGNVAEDSSG- 229
Query: 158 PVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216
P+I DPA +YGH+E E ++ GF SFY++Y +PK PGFEKR LY L+HYLNH+
Sbjct: 230 PIIFDPASFYGHSEYELAIAGMFGGFSSSFYSAYHSKIPKTPGFEKRLQLYQLFHYLNHW 289
Query: 217 NLFGSGYRSSALSII 231
N FGSGYR S+L+I+
Sbjct: 290 NHFGSGYRGSSLNIM 304
>sp|Q9HA64|KT3K_HUMAN Ketosamine-3-kinase OS=Homo sapiens GN=FN3KRP PE=1 SV=2
Length = 309
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 147/260 (56%), Gaps = 25/260 (9%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGE L A+ +T T++ P+P KV P GGS ++ME ++ + + G +LA++
Sbjct: 51 MFEGEMASLTAILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADL 110
Query: 61 H------------KAGKSSKG-----------FGFDVDNTIGSTPQINKWTSNWIEFYAE 97
H +AG +G FGFDV G PQ+N W +W+ FYA
Sbjct: 111 HLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYAR 170
Query: 98 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 157
R+ Q+ + + GD Q L + LF + + P LLHGDLW GN++ D +G
Sbjct: 171 QRIQPQMDMVEKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSG- 229
Query: 158 PVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216
PVI DPA +YGH+E E ++ GF SFY++Y +PK PGFEKR LY L+HYLNH+
Sbjct: 230 PVIFDPASFYGHSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHW 289
Query: 217 NLFGSGYRSSALSIIDDYLR 236
N FGSGYR S+L+I+ + ++
Sbjct: 290 NHFGSGYRGSSLNIMRNLVK 309
>sp|Q9ER35|FN3K_MOUSE Fructosamine-3-kinase OS=Mus musculus GN=Fn3k PE=2 SV=1
Length = 309
Score = 190 bits (482), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 140/260 (53%), Gaps = 25/260 (9%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGE L A+ T +R P+P KV LP GG+ +ME ++ S S G+++A++
Sbjct: 51 MFEGEMASLEALRNTGLVRVPKPMKVIDLPGGGAVFVMEHLKMKSLSSQASKLGEQMADL 110
Query: 61 H----------KAGKSSKG-------------FGFDVDNTIGSTPQINKWTSNWIEFYAE 97
H K +++ G FGF G PQ+N+W +W F+
Sbjct: 111 HLYNQKLREKSKTRQNTVGCGAEGAEPQGVTKFGFHTVTCCGFIPQVNEWQEDWPTFFTR 170
Query: 98 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 157
HRL QL L Y D + RL + LF G+ + P LLHGDLWSGN++ D G
Sbjct: 171 HRLQAQLDLIEKDYADRETQELWSRLQVKIPDLFAGIEIVPALLHGDLWSGNVAEDDQG- 229
Query: 158 PVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216
PVI DPA +YGH+E E + S GF SF+ +Y +PK PGF+KR LY L++YLNH+
Sbjct: 230 PVIYDPASFYGHSEFELAIASMFGGFPRSFFTAYHRKIPKAPGFDKRLLLYQLFNYLNHW 289
Query: 217 NLFGSGYRSSALSIIDDYLR 236
N FG YRS +L ++ LR
Sbjct: 290 NHFGREYRSPSLGVMRKLLR 309
>sp|Q9H479|FN3K_HUMAN Fructosamine-3-kinase OS=Homo sapiens GN=FN3K PE=1 SV=1
Length = 309
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 139/260 (53%), Gaps = 25/260 (9%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEM 60
MFEGE L A+ T +R PRP KV LP GG+ +ME ++ S S G+++A++
Sbjct: 51 MFEGEVASLEALRSTGLVRVPRPMKVIDLPGGGAAFVMEHLKMKSLSSQASKLGEQMADL 110
Query: 61 H---------------KAGKSSKG--------FGFDVDNTIGSTPQINKWTSNWIEFYAE 97
H G+ +G FGF G PQ+N+W +W F+A
Sbjct: 111 HLYNQKLREKLKEEENTVGRRGEGAEPQYVDKFGFHTVTCCGFIPQVNEWQDDWPTFFAR 170
Query: 98 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 157
HRL QL L Y D + RL + LF G+ + P LLHGDLWSGN++ D G
Sbjct: 171 HRLQAQLDLIEKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVG- 229
Query: 158 PVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216
P+I DPA +YGH+E E ++ GF SF+ +Y +PK PGF++R LY L++YLNH+
Sbjct: 230 PIIYDPASFYGHSEFELAIALMFGGFPRSFFTAYHRKIPKAPGFDQRLLLYQLFNYLNHW 289
Query: 217 NLFGSGYRSSALSIIDDYLR 236
N FG YRS +L + L+
Sbjct: 290 NHFGREYRSPSLGTMRRLLK 309
>sp|Q87PM1|Y1481_VIBPA Uncharacterized protein VP1481 OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=VP1481 PE=3 SV=1
Length = 288
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 129/243 (53%), Gaps = 27/243 (11%)
Query: 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAE 59
FE EA L + ET TI P VG ++II+ ++ N FG++LA+
Sbjct: 56 FEVEAESLHLLRETSTIFVPEVVLVGK-TKNNAFIILNYLPTKPLDDPENSFKFGQQLAQ 114
Query: 60 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA---------LDQ 110
+H+ G+ K FGFD DN +GST Q N+W W F+AE R+G+QL+L +D
Sbjct: 115 LHQWGEQ-KEFGFDTDNYLGSTLQPNQWHKKWCMFFAEQRIGWQLQLLKEKGVTLVDIDD 173
Query: 111 YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHN 170
+ D +L+ N P EP LLHGDLW+GN++ G P+ DPACY+G
Sbjct: 174 FIDVV-----KQLLANHTP-------EPSLLHGDLWNGNVALTAFG-PICFDPACYWGDR 220
Query: 171 EAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALS 229
E + M+ GF FY Y VMP PG+ +R+D+Y LYH LNH NLFG Y A
Sbjct: 221 ECDIAMTELFGGFQPEFYQGYESVMPLLPGYHERKDIYNLYHILNHCNLFGGHYLEQAQL 280
Query: 230 IID 232
I+
Sbjct: 281 TIN 283
>sp|Q9KRU5|Y1539_VIBCH Uncharacterized protein VC_1539 OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1539
PE=3 SV=1
Length = 288
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 129/241 (53%), Gaps = 17/241 (7%)
Query: 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSV--FGKKLAE 59
F E L M E+ T++ P G T +Y+++ ++ + FG +LA
Sbjct: 56 FTAEVENLRVMRESNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLAN 114
Query: 60 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 119
+H+ G+ K FGFD+DN IG+T Q N W W F+AE R+G+QL+L ++ + T
Sbjct: 115 LHRWGEQ-KEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINE 173
Query: 120 GHRLMK----NLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 175
++K N +P P LLHGDLW GN+++ NG P+ DPACY+G E +
Sbjct: 174 FVEMVKTRLANHSP-------RPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIA 225
Query: 176 MS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 234
++ W GF F+ Y V P G+E+R+D+Y LYH LNHYN FG Y A +I+
Sbjct: 226 LAEWFGGFQPEFFQGYESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKI 285
Query: 235 L 235
L
Sbjct: 286 L 286
>sp|Q8D9N5|Y2562_VIBVU Uncharacterized protein VV1_2562 OS=Vibrio vulnificus (strain
CMCP6) GN=VV1_2562 PE=3 SV=1
Length = 288
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAE 59
F+ EA L + +T ++ P +G + ++II+ F+ N FG++LA
Sbjct: 56 FQVEAENLRLLRQTDSVTLPELVLIGNTKSN-AFIILNFLPTKPLEDTENSYKFGQQLAY 114
Query: 60 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 119
+H G+ K +G D DN +G+T Q N W W F++E R+G+QL+L ++ +
Sbjct: 115 LHLWGEQ-KEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQLLKEK---GVTFGV 170
Query: 120 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 179
+++ +A N P L+HGDLW GN++ G P+ DPACY+G E + M+
Sbjct: 171 IDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFG-PICYDPACYWGDRECDIAMTEL 229
Query: 180 -AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 235
GF FY Y ++ P G+ +R+++Y LYH LNH N FG Y A ID L
Sbjct: 230 FGGFNAEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKIL 286
>sp|P46381|YNIA_ENTAK Uncharacterized protein EAE_16955 OS=Enterobacter aerogenes (strain
ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC
13534 / NCIMB 10102 / NCTC 10006) GN=EAE_16955 PE=3 SV=2
Length = 286
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG-NQSVFGKKLAE 59
+F EA L + +T+ P+ F VG+ S+++ME++ N + G+++A
Sbjct: 55 IFTAEADQLELLSRCKTVSVPQVFAVGS-DRDYSFLVMEYLPPRPLDAHNAFLLGQQIAH 113
Query: 60 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ---YGD-ST 115
+H+ + FG D DN + +TPQ N W W F+AE R+G+QL+LA ++ +GD
Sbjct: 114 LHQWSDQPQ-FGLDFDNDLSTTPQPNAWQRRWSTFFAEQRIGWQLELAAEKGLHFGDIDN 172
Query: 116 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 175
I + + + + P +P LLHGDLWSGN + NG P I DPACY+G E +
Sbjct: 173 IVESVQQRLSSHQP-------QPSLLHGDLWSGNCALGPNG-PYIFDPACYWGDRECDLA 224
Query: 176 M-SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 234
M Y+ Y V P GF +R+ +Y LY LN LFG + +A +D+
Sbjct: 225 MLPLHPEQPPQIYDGYQSVSPLPAGFLERQPIYQLYTLLNRAILFGGQHLVTAQKALDEA 284
Query: 235 LR 236
L+
Sbjct: 285 LQ 286
>sp|P58065|YNIA_ECO57 Uncharacterized protein YniA OS=Escherichia coli O157:H7 GN=yniA
PE=3 SV=1
Length = 286
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 18/241 (7%)
Query: 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQS-VFGKKLAEM 60
F EA L + ++T+ P+ + VGA S+++M+++ + + + G+++A +
Sbjct: 55 FTAEADQLELLSRSKTVTVPKVWAVGA-DRDYSFLVMDYLPPRPLDAHSAFILGQQIARL 113
Query: 61 HKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ---YG--DST 115
H+ + FG D DN++ +TPQ N W W F+AE R+G+QL+LA ++ +G D+
Sbjct: 114 HQWSDQPQ-FGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAI 172
Query: 116 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 175
+ RL + +P LLHGDLWSGN + +G P I DPACY+G E +
Sbjct: 173 VEHIQQRLASH--------QPQPSLLHGDLWSGNCALGPDG-PYIFDPACYWGDRECDLA 223
Query: 176 M-SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 234
M Y+ Y V P F +R+ +Y LY LN LFG + A +D
Sbjct: 224 MLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRL 283
Query: 235 L 235
L
Sbjct: 284 L 284
>sp|P77739|YNIA_ECOLI Uncharacterized protein YniA OS=Escherichia coli (strain K12)
GN=yniA PE=3 SV=1
Length = 286
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQS-VFGKKLAEM 60
F EA L + ++T+ P+ + VGA S+++M+++ + + + G+++A +
Sbjct: 55 FTAEADQLELLSRSKTVTVPKVWAVGA-DRDYSFLVMDYLPPRPLDAHSAFILGQQIARL 113
Query: 61 HKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ---YG--DST 115
H+ + FG D DN + +TPQ N W W F+AE R+G+QL+LA ++ +G D+
Sbjct: 114 HQWSDQPQ-FGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAI 172
Query: 116 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 175
+ RL + +P LLHGDLWSGN + +G P I DPACY+G E +
Sbjct: 173 VEHIQQRLASH--------QPQPSLLHGDLWSGNCALGPDG-PYIFDPACYWGDRECDLA 223
Query: 176 M-SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 234
M Y+ Y V P F +R+ +Y LY LN LFG + A +D
Sbjct: 224 MLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRL 283
Query: 235 L 235
L
Sbjct: 284 L 284
>sp|Q9CN56|Y587_PASMU Uncharacterized protein PM0587 OS=Pasteurella multocida (strain
Pm70) GN=PM0587 PE=3 SV=1
Length = 288
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query: 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSV--FGKKLA 58
MF EA L + +T TI P + VG T S++++E + + ++ FG++LA
Sbjct: 55 MFRAEADQLLLLAKTNTINVPNVYTVGCSHTH-SFLLLEALPLDKTNPVDAMGKFGEQLA 113
Query: 59 EMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ---YGDST 115
++H K + +G D D +G Q N W NW F++E R+G+QL++ ++ +GD
Sbjct: 114 KLHLI-KGADNYGLDFDTWLGPEYQPNGWKENWATFFSEQRIGWQLQICREKNLVFGDIE 172
Query: 116 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 175
+ L+K +A L +P LLHG+LW N ++ K E DPACY+G E +
Sbjct: 173 V------LVKKVAELLAKHKPQPALLHGNLWIENCATVKQ-EIFTYDPACYWGDRECDLA 225
Query: 176 MSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 234
S F FY SY P G+ +R+ +Y LY+ LN + F Y I D
Sbjct: 226 FSELFEPFPRQFYESYDRTYPIDEGYPERKAIYQLYYLLNFSHRFNKHYVELTKKFIHDI 285
Query: 235 L 235
L
Sbjct: 286 L 286
>sp|P46382|YNIA_KLEPN Uncharacterized protein in tonB 3'region (Fragment) OS=Klebsiella
pneumoniae PE=3 SV=1
Length = 123
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMP 195
+P LLHGDLWSGN + +G P I DPACY+G E + M Y+ Y V P
Sbjct: 19 QPSLLHGDLWSGNCALGPDG-PYIFDPACYWGDRECDLAMLPMHPEQPPQIYDGYQSVSP 77
Query: 196 KQPGFEKRRDLYMLYHYLNHYNLFGSGYR-SSALSIIDDYL 235
GF R+ +Y LY LN LFG + ++A +DD L
Sbjct: 78 LPSGFLDRQPIYQLYTLLNRAILFGGQHLVTAAQQALDDVL 118
>sp|Q65KK1|MTNK_BACLD Methylthioribose kinase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=mtnK PE=3 SV=1
Length = 398
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 134 VNVEPCLLHGDLWSGNISSDKNGEPVILDP 163
++ E L+HGDL +G+I + ++GE I+DP
Sbjct: 223 LSAEETLIHGDLHTGSIFAGEDGETKIIDP 252
>sp|B3WCD5|SYL_LACCB Leucine--tRNA ligase OS=Lactobacillus casei (strain BL23) GN=leuS
PE=3 SV=1
Length = 803
Score = 30.8 bits (68), Expect = 7.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 49 NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST-PQINKWTSNWIEFYAEHRLGYQLKLA 107
N F K+ E K +S GF +D + I +T P KWT E +H L Y+ ++
Sbjct: 95 NPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLAYEAEVP 154
Query: 108 LD 109
++
Sbjct: 155 VN 156
>sp|Q03AT8|SYL_LACC3 Leucine--tRNA ligase OS=Lactobacillus casei (strain ATCC 334)
GN=leuS PE=3 SV=1
Length = 803
Score = 30.8 bits (68), Expect = 7.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 49 NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST-PQINKWTSNWIEFYAEHRLGYQLKLA 107
N F K+ E K +S GF +D + I +T P KWT E +H L Y+ ++
Sbjct: 95 NPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLAYEAEVP 154
Query: 108 LD 109
++
Sbjct: 155 VN 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,473,231
Number of Sequences: 539616
Number of extensions: 4529121
Number of successful extensions: 7838
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 7780
Number of HSP's gapped (non-prelim): 38
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)