Query 026343
Match_columns 240
No_of_seqs 156 out of 1383
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 06:48:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026343.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026343hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3001 Uncharacterized protei 100.0 4.6E-52 9.9E-57 324.6 21.7 230 1-236 54-285 (286)
2 PF03881 Fructosamin_kin: Fruc 100.0 1.3E-50 2.7E-55 336.3 16.9 231 1-236 55-287 (288)
3 KOG3021 Predicted kinase [Gene 100.0 2.1E-48 4.5E-53 301.0 20.2 239 1-239 50-312 (313)
4 PRK10593 hypothetical protein; 100.0 7.3E-38 1.6E-42 262.9 21.0 226 1-238 53-296 (297)
5 cd05155 APH_ChoK_like_1 Unchar 99.9 2.2E-22 4.8E-27 163.9 13.2 185 2-208 35-234 (235)
6 cd05150 APH Aminoglycoside 3'- 99.9 3.1E-21 6.8E-26 157.9 18.3 181 2-212 38-242 (244)
7 TIGR02721 ycfN_thiK thiamine k 99.9 2.7E-20 5.8E-25 153.5 18.9 182 2-219 38-232 (256)
8 cd05153 HomoserineK_II Homoser 99.9 2.6E-20 5.5E-25 156.7 18.7 186 2-210 53-259 (296)
9 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 1E-20 2.2E-25 153.0 14.6 156 2-193 39-213 (226)
10 PRK05231 homoserine kinase; Pr 99.9 5.8E-20 1.3E-24 156.1 19.5 186 3-207 62-268 (319)
11 cd05152 MPH2' Macrolide 2'-Pho 99.9 7.1E-20 1.5E-24 152.3 18.9 183 2-210 52-261 (276)
12 TIGR00938 thrB_alt homoserine 99.9 9.5E-20 2.1E-24 154.1 19.6 185 3-207 63-268 (307)
13 COG3173 Predicted aminoglycosi 99.8 5.1E-20 1.1E-24 154.1 16.9 175 3-197 69-273 (321)
14 PLN02876 acyl-CoA dehydrogenas 99.8 2E-19 4.4E-24 169.9 18.8 200 2-218 85-332 (822)
15 PRK11768 serine/threonine prot 99.8 5.9E-19 1.3E-23 150.3 19.3 193 3-216 68-279 (325)
16 TIGR02906 spore_CotS spore coa 99.8 3.6E-18 7.7E-23 144.6 19.3 199 3-212 35-271 (313)
17 COG2334 Putative homoserine ki 99.8 2.7E-18 5.9E-23 145.2 17.1 187 2-208 65-278 (331)
18 cd05154 ACAD10_11_like Acyl-Co 99.8 1.9E-17 4.1E-22 132.9 15.4 156 2-177 42-216 (223)
19 PF01636 APH: Phosphotransfera 99.8 8.3E-18 1.8E-22 135.8 13.4 186 2-207 37-239 (239)
20 cd05157 ETNK_euk Ethanolamine 99.7 2.2E-16 4.7E-21 128.4 15.4 152 3-178 43-212 (235)
21 PRK09550 mtnK methylthioribose 99.7 3E-16 6.6E-21 135.8 15.9 162 2-177 77-262 (401)
22 PLN02756 S-methyl-5-thioribose 99.7 9.8E-17 2.1E-21 138.3 12.7 163 3-177 82-269 (418)
23 cd05156 ChoK_euk Choline Kinas 99.7 1.6E-15 3.6E-20 127.9 16.0 151 2-177 47-223 (302)
24 TIGR02904 spore_ysxE spore coa 99.7 9.2E-16 2E-20 129.9 14.4 198 4-210 46-278 (309)
25 PRK06148 hypothetical protein; 99.6 1.6E-14 3.4E-19 139.0 20.6 186 3-208 66-286 (1013)
26 cd05151 ChoK Choline Kinase (C 99.6 3.6E-15 7.8E-20 115.0 13.1 116 2-193 39-167 (170)
27 PRK10271 thiK thiamine kinase; 99.6 5.6E-15 1.2E-19 114.8 13.4 155 36-219 1-161 (188)
28 PF07914 DUF1679: Protein of u 99.6 5.9E-15 1.3E-19 128.8 14.0 196 3-210 114-362 (414)
29 COG3231 Aph Aminoglycoside pho 99.6 1.1E-14 2.4E-19 114.4 13.2 181 2-211 59-263 (266)
30 PRK06149 hypothetical protein; 99.6 5.7E-14 1.2E-18 134.9 20.3 187 2-207 70-292 (972)
31 TIGR01767 MTRK 5-methylthiorib 99.6 2.2E-14 4.8E-19 121.9 14.3 160 3-177 47-231 (370)
32 PLN02236 choline kinase 99.6 2.4E-13 5.1E-18 116.7 20.4 183 3-215 84-306 (344)
33 PRK12396 5-methylribose kinase 99.6 1E-14 2.2E-19 125.3 11.6 162 3-177 80-266 (409)
34 PLN02421 phosphotransferase, a 99.6 2.5E-13 5.4E-18 116.0 18.8 161 3-193 61-253 (330)
35 PTZ00384 choline kinase; Provi 99.4 4.3E-11 9.2E-16 103.8 16.7 147 3-177 100-266 (383)
36 PF01633 Choline_kinase: Choli 99.4 2.4E-12 5.1E-17 103.1 8.3 147 3-178 21-185 (211)
37 PF02958 EcKinase: Ecdysteroid 99.4 7.4E-12 1.6E-16 105.2 11.4 177 1-179 49-262 (294)
38 PTZ00296 choline kinase; Provi 99.4 8.2E-11 1.8E-15 103.8 18.3 150 3-177 157-323 (442)
39 COG3178 Predicted phosphotrans 99.3 2.6E-11 5.5E-16 99.2 13.5 171 8-195 73-269 (351)
40 PF04655 APH_6_hur: Aminoglyco 99.3 4.5E-11 9.8E-16 97.8 14.4 179 3-213 41-243 (253)
41 cd05120 APH_ChoK_like Aminogly 99.3 2E-11 4.3E-16 91.3 10.7 111 2-178 38-149 (155)
42 COG3642 Mn2+-dependent serine/ 99.3 1.6E-11 3.6E-16 94.3 9.1 121 3-195 47-181 (204)
43 TIGR02905 spore_yutH spore coa 99.3 8.3E-10 1.8E-14 93.7 18.3 194 3-210 45-269 (313)
44 TIGR03724 arch_bud32 Kae1-asso 99.2 3E-10 6.6E-15 89.8 10.3 122 3-196 45-181 (199)
45 COG0510 ycfN Thiamine kinase a 99.0 1.5E-08 3.4E-13 83.9 14.9 60 138-197 153-218 (269)
46 PF06293 Kdo: Lipopolysacchari 99.0 5.2E-09 1.1E-13 83.5 10.3 41 3-44 59-102 (206)
47 cd05146 RIO3_euk RIO kinase fa 99.0 3.1E-09 6.8E-14 83.7 8.8 36 3-44 74-109 (197)
48 COG4857 Predicted kinase [Gene 99.0 4.5E-09 9.9E-14 85.7 9.5 160 4-177 83-267 (408)
49 PF01163 RIO1: RIO1 family; I 98.9 9.2E-10 2E-14 86.3 4.6 38 2-45 55-94 (188)
50 PRK14879 serine/threonine prot 98.9 6.1E-09 1.3E-13 83.0 9.4 124 2-194 46-184 (211)
51 COG0478 RIO-like serine/threon 98.9 3.2E-09 6.8E-14 86.4 6.6 102 3-175 157-260 (304)
52 KOG4720 Ethanolamine kinase [L 98.9 1.1E-08 2.4E-13 83.9 9.6 153 3-177 126-289 (391)
53 PRK10359 lipopolysaccharide co 98.9 1E-08 2.2E-13 82.7 8.4 44 2-46 82-130 (232)
54 PRK09605 bifunctional UGMP fam 98.9 1.1E-08 2.4E-13 93.0 9.2 63 139-203 448-524 (535)
55 PRK15123 lipopolysaccharide co 98.9 2.9E-08 6.3E-13 82.2 10.9 42 2-44 75-120 (268)
56 smart00587 CHK ZnF_C4 abd HLH 98.8 1.3E-08 2.8E-13 80.6 8.1 57 136-192 118-188 (196)
57 PRK01723 3-deoxy-D-manno-octul 98.8 3.9E-08 8.5E-13 80.3 10.7 42 2-44 87-131 (239)
58 KOG3087 Serine/threonine prote 98.8 3.4E-08 7.4E-13 76.1 8.0 39 3-45 58-96 (229)
59 TIGR02457 TreS_Cterm trehalose 98.7 8.6E-07 1.9E-11 79.7 14.8 160 5-176 203-426 (528)
60 COG0661 AarF Predicted unusual 98.6 1.1E-07 2.3E-12 85.3 8.3 43 2-47 208-254 (517)
61 PRK12274 serine/threonine prot 98.6 1.2E-07 2.7E-12 75.2 7.7 37 2-45 48-84 (218)
62 COG1718 RIO1 Serine/threonine 98.6 2.7E-07 5.8E-12 74.5 8.4 36 3-44 116-151 (268)
63 cd05145 RIO1_like RIO kinase f 98.6 6.8E-07 1.5E-11 70.4 10.0 37 3-45 67-103 (190)
64 KOG2268 Serine/threonine prote 98.5 1.8E-07 3.9E-12 78.3 5.3 98 3-172 158-257 (465)
65 cd05147 RIO1_euk RIO kinase fa 98.5 9.5E-07 2.1E-11 69.6 8.4 37 3-45 67-103 (190)
66 PRK09902 hypothetical protein; 98.5 3.2E-06 6.9E-11 67.2 11.3 42 2-44 66-110 (216)
67 TIGR01982 UbiB 2-polyprenylphe 98.4 1E-06 2.2E-11 78.2 8.9 44 2-48 200-247 (437)
68 PRK04750 ubiB putative ubiquin 98.4 8.3E-07 1.8E-11 80.2 8.4 42 2-46 203-248 (537)
69 COG3570 StrB Streptomycin 6-ki 98.4 5.9E-06 1.3E-10 64.8 11.8 49 130-179 154-202 (274)
70 smart00090 RIO RIO-like kinase 98.4 1.9E-06 4E-11 70.3 8.9 39 2-46 97-135 (237)
71 cd05144 RIO2_C RIO kinase fami 98.4 3.4E-06 7.4E-11 66.7 9.5 38 3-46 81-118 (198)
72 KOG1235 Predicted unusual prot 98.3 3E-06 6.4E-11 76.1 8.9 44 2-48 241-291 (538)
73 COG2187 Uncharacterized protei 98.3 5E-06 1.1E-10 68.1 9.2 80 136-217 207-298 (337)
74 PF06176 WaaY: Lipopolysacchar 98.1 1.8E-05 3.9E-10 63.3 8.7 25 139-164 155-179 (229)
75 cd05119 RIO RIO kinase family, 98.1 2.6E-05 5.7E-10 60.8 9.4 37 3-45 65-101 (187)
76 PRK09188 serine/threonine prot 98.1 1.4E-05 3.1E-10 69.0 8.0 38 2-46 68-105 (365)
77 KOG2686 Choline kinase [Cell w 98.0 0.0001 2.2E-09 62.7 12.0 145 3-177 90-253 (366)
78 PRK14705 glycogen branching en 98.0 0.00033 7.2E-09 68.7 16.2 215 5-236 185-471 (1224)
79 COG3281 Ble Uncharacterized pr 97.8 0.00079 1.7E-08 56.8 13.1 174 50-238 201-436 (438)
80 KOG0608 Warts/lats-like serine 97.6 0.00016 3.4E-09 65.6 7.1 32 137-168 747-778 (1034)
81 KOG0592 3-phosphoinositide-dep 97.6 0.00049 1.1E-08 61.1 9.6 99 3-164 121-219 (604)
82 KOG2270 Serine/threonine prote 97.6 0.00026 5.7E-09 60.7 7.3 36 3-44 214-249 (520)
83 KOG0605 NDR and related serine 97.6 0.00029 6.3E-09 62.3 7.7 26 139-164 261-286 (550)
84 PTZ00267 NIMA-related protein 97.5 0.00028 6.2E-09 63.4 7.3 41 2-46 112-152 (478)
85 PLN00034 mitogen-activated pro 97.4 0.00035 7.6E-09 60.1 6.6 26 139-164 188-213 (353)
86 KOG0610 Putative serine/threon 97.4 0.00059 1.3E-08 58.8 7.3 39 3-45 125-163 (459)
87 cd00180 PKc Catalytic domain o 97.4 0.00062 1.3E-08 52.7 6.6 40 2-45 38-77 (215)
88 cd05102 PTKc_VEGFR3 Catalytic 97.4 0.00074 1.6E-08 57.6 7.6 27 138-164 193-219 (338)
89 cd05598 STKc_LATS Catalytic do 97.3 0.00035 7.6E-09 60.6 5.6 26 139-164 121-146 (376)
90 TIGR02569 TIGR02569_actnb cons 97.3 0.015 3.3E-07 47.4 13.8 189 4-210 43-249 (272)
91 cd05600 STKc_Sid2p_Dbf2p Catal 97.3 0.00068 1.5E-08 57.7 6.5 26 139-164 121-146 (333)
92 cd05614 STKc_MSK2_N N-terminal 97.3 0.0011 2.3E-08 56.5 7.5 26 139-164 125-150 (332)
93 cd05625 STKc_LATS1 Catalytic d 97.3 0.0011 2.3E-08 57.8 7.5 26 139-164 121-146 (382)
94 cd06649 PKc_MEK2 Catalytic dom 97.2 0.00086 1.9E-08 57.1 6.8 26 139-164 124-149 (331)
95 cd05049 PTKc_Trk Catalytic dom 97.2 0.001 2.2E-08 54.8 7.0 26 139-164 142-167 (280)
96 cd05594 STKc_PKB_alpha Catalyt 97.2 0.0021 4.5E-08 54.6 8.9 27 138-164 115-141 (325)
97 KOG0615 Serine/threonine prote 97.2 0.0017 3.7E-08 56.0 8.1 37 2-45 223-262 (475)
98 cd05590 STKc_nPKC_eta Catalyti 97.2 0.00065 1.4E-08 57.6 5.6 26 139-164 116-141 (320)
99 cd05627 STKc_NDR2 Catalytic do 97.2 0.00061 1.3E-08 58.8 5.4 26 139-164 121-146 (360)
100 cd05628 STKc_NDR1 Catalytic do 97.2 0.0018 3.9E-08 55.9 8.4 26 139-164 121-146 (363)
101 cd05626 STKc_LATS2 Catalytic d 97.2 0.00071 1.5E-08 58.9 5.8 26 139-164 121-146 (381)
102 cd05589 STKc_PKN Catalytic dom 97.2 0.0019 4.2E-08 54.8 8.2 26 139-164 121-146 (324)
103 cd05597 STKc_DMPK_like Catalyt 97.2 0.0013 2.8E-08 56.1 6.9 26 139-164 122-147 (331)
104 cd05629 STKc_NDR_like_fungal C 97.1 0.0017 3.6E-08 56.4 7.2 26 139-164 121-146 (377)
105 cd05591 STKc_nPKC_epsilon Cata 97.1 0.0011 2.4E-08 56.2 6.0 26 139-164 116-141 (321)
106 cd05601 STKc_CRIK Catalytic do 97.1 0.0021 4.5E-08 54.6 7.7 26 139-164 122-147 (330)
107 cd05587 STKc_cPKC Catalytic do 97.1 0.0018 3.8E-08 55.0 7.2 26 139-164 121-146 (324)
108 cd05582 STKc_RSK_N N-terminal 97.1 0.00097 2.1E-08 56.4 5.5 26 139-164 118-143 (318)
109 cd05084 PTKc_Fes Catalytic dom 97.1 0.0024 5.3E-08 51.7 7.7 26 139-164 114-139 (252)
110 PTZ00426 cAMP-dependent protei 97.1 0.002 4.3E-08 55.3 7.3 26 139-164 151-176 (340)
111 cd05088 PTKc_Tie2 Catalytic do 97.1 0.0046 1E-07 51.9 9.4 41 2-45 54-94 (303)
112 cd05573 STKc_ROCK_NDR_like Cat 97.1 0.00071 1.5E-08 57.9 4.4 27 138-164 120-146 (350)
113 PTZ00263 protein kinase A cata 97.1 0.0012 2.6E-08 56.2 5.8 26 139-164 138-163 (329)
114 cd06650 PKc_MEK1 Catalytic dom 97.0 0.0017 3.6E-08 55.5 6.6 26 139-164 124-149 (333)
115 cd05584 STKc_p70S6K Catalytic 97.0 0.002 4.4E-08 54.6 7.1 26 139-164 120-145 (323)
116 cd05599 STKc_NDR_like Catalyti 97.0 0.0012 2.7E-08 56.8 5.8 26 139-164 121-146 (364)
117 cd05085 PTKc_Fer Catalytic dom 97.0 0.0029 6.4E-08 51.1 7.7 26 139-164 113-138 (250)
118 cd05096 PTKc_DDR1 Catalytic do 97.0 0.0021 4.6E-08 53.8 6.9 26 139-164 158-183 (304)
119 cd05588 STKc_aPKC Catalytic do 97.0 0.0014 2.9E-08 55.9 5.7 26 139-164 116-141 (329)
120 cd07871 STKc_PCTAIRE3 Catalyti 97.0 0.0021 4.7E-08 53.5 6.7 26 139-164 123-148 (288)
121 cd05596 STKc_ROCK Catalytic do 97.0 0.0023 5.1E-08 55.5 7.1 26 139-164 162-187 (370)
122 KOG0192 Tyrosine kinase specif 97.0 0.0059 1.3E-07 52.9 9.3 28 136-164 161-189 (362)
123 cd05617 STKc_aPKC_zeta Catalyt 97.0 0.0014 3.1E-08 55.7 5.6 26 139-164 116-141 (327)
124 KOG1989 ARK protein kinase fam 97.0 0.004 8.6E-08 58.0 8.6 72 136-212 163-247 (738)
125 PRK13184 pknD serine/threonine 97.0 0.0025 5.5E-08 61.2 7.6 26 139-164 133-158 (932)
126 cd05104 PTKc_Kit Catalytic dom 97.0 0.0027 5.8E-08 55.3 7.3 42 2-46 85-126 (375)
127 cd05571 STKc_PKB Catalytic dom 97.0 0.0032 6.9E-08 53.4 7.6 26 139-164 115-140 (323)
128 cd05609 STKc_MAST Catalytic do 97.0 0.0016 3.4E-08 54.7 5.6 26 139-164 121-146 (305)
129 cd05593 STKc_PKB_gamma Catalyt 97.0 0.0047 1E-07 52.6 8.5 26 139-164 115-140 (328)
130 cd05595 STKc_PKB_beta Catalyti 97.0 0.0026 5.6E-08 54.0 6.9 26 139-164 115-140 (323)
131 cd05615 STKc_cPKC_alpha Cataly 97.0 0.0025 5.4E-08 54.1 6.8 26 139-164 121-146 (323)
132 cd06629 STKc_MAPKKK_Bck1_like 96.9 0.0028 6E-08 52.0 6.8 26 139-164 128-153 (272)
133 KOG0598 Ribosomal protein S6 k 96.9 0.0033 7.1E-08 53.4 7.2 40 2-45 72-111 (357)
134 cd05585 STKc_YPK1_like Catalyt 96.9 0.0028 6.1E-08 53.5 7.0 26 139-164 113-138 (312)
135 cd05618 STKc_aPKC_iota Catalyt 96.9 0.0016 3.4E-08 55.6 5.4 26 139-164 116-141 (329)
136 cd05621 STKc_ROCK2 Catalytic d 96.9 0.0025 5.5E-08 55.3 6.8 26 139-164 162-187 (370)
137 cd05633 STKc_GRK3 Catalytic do 96.9 0.003 6.5E-08 52.4 6.9 26 139-164 117-142 (279)
138 cd05105 PTKc_PDGFR_alpha Catal 96.9 0.0072 1.6E-07 53.2 9.5 42 2-46 87-128 (400)
139 cd05612 STKc_PRKX_like Catalyt 96.9 0.0018 3.9E-08 54.0 5.5 26 139-164 121-146 (291)
140 cd05090 PTKc_Ror1 Catalytic do 96.9 0.0029 6.4E-08 52.3 6.7 26 139-164 144-169 (283)
141 cd05062 PTKc_IGF-1R Catalytic 96.9 0.0015 3.3E-08 53.9 4.9 26 139-164 139-164 (277)
142 cd05620 STKc_nPKC_delta Cataly 96.9 0.0035 7.6E-08 53.0 7.1 26 139-164 116-141 (316)
143 PRK10345 hypothetical protein; 96.9 0.0068 1.5E-07 48.5 8.2 41 2-43 43-88 (210)
144 cd05580 STKc_PKA Catalytic dom 96.9 0.0039 8.4E-08 51.9 7.1 27 138-164 120-146 (290)
145 cd06644 STKc_STK10_LOK Catalyt 96.8 0.0081 1.8E-07 49.9 9.0 26 139-164 130-155 (292)
146 cd05061 PTKc_InsR Catalytic do 96.8 0.0024 5.3E-08 53.0 5.6 27 138-164 138-164 (288)
147 cd05066 PTKc_EphR_A Catalytic 96.8 0.0051 1.1E-07 50.4 7.4 26 139-164 126-151 (267)
148 cd07872 STKc_PCTAIRE2 Catalyti 96.8 0.003 6.5E-08 53.1 6.1 26 139-164 124-149 (309)
149 cd05106 PTKc_CSF-1R Catalytic 96.8 0.0033 7.1E-08 54.7 6.5 42 2-46 88-129 (374)
150 cd05068 PTKc_Frk_like Catalyti 96.8 0.0041 8.9E-08 50.7 6.7 26 139-164 123-148 (261)
151 cd05624 STKc_MRCK_beta Catalyt 96.8 0.0034 7.3E-08 53.5 6.4 27 138-164 121-147 (331)
152 cd05097 PTKc_DDR_like Catalyti 96.8 0.0033 7.2E-08 52.4 6.3 41 2-46 64-104 (295)
153 cd05042 PTKc_Aatyk Catalytic d 96.8 0.0049 1.1E-07 50.5 7.1 26 139-164 120-145 (269)
154 cd05122 PKc_STE Catalytic doma 96.8 0.0067 1.4E-07 48.6 7.8 27 138-164 117-143 (253)
155 cd06656 STKc_PAK3 Catalytic do 96.8 0.0055 1.2E-07 51.3 7.5 26 139-164 135-160 (297)
156 cd06640 STKc_MST4 Catalytic do 96.8 0.0086 1.9E-07 49.4 8.4 25 139-163 121-145 (277)
157 cd05622 STKc_ROCK1 Catalytic d 96.8 0.0052 1.1E-07 53.4 7.4 26 139-164 162-187 (371)
158 KOG0595 Serine/threonine-prote 96.8 0.0023 5E-08 55.1 4.9 39 2-46 56-96 (429)
159 cd06625 STKc_MEKK3_like Cataly 96.8 0.0036 7.8E-08 51.0 6.1 26 139-164 124-149 (263)
160 cd05082 PTKc_Csk Catalytic dom 96.8 0.0072 1.6E-07 49.1 7.9 26 139-164 122-147 (256)
161 cd05115 PTKc_Zap-70 Catalytic 96.7 0.0072 1.6E-07 49.4 7.7 26 139-164 115-140 (257)
162 cd05094 PTKc_TrkC Catalytic do 96.7 0.0023 4.9E-08 53.3 4.8 26 139-164 143-168 (291)
163 cd05592 STKc_nPKC_theta_delta 96.7 0.0031 6.8E-08 53.4 5.6 26 139-164 116-141 (316)
164 cd05574 STKc_phototropin_like 96.7 0.0042 9.1E-08 52.3 6.2 26 139-164 123-148 (316)
165 cd05079 PTKc_Jak1_rpt2 Catalyt 96.7 0.0082 1.8E-07 49.7 7.9 26 139-164 129-154 (284)
166 cd05608 STKc_GRK1 Catalytic do 96.7 0.0097 2.1E-07 49.3 8.2 26 139-164 117-142 (280)
167 cd06615 PKc_MEK Catalytic doma 96.7 0.0038 8.2E-08 52.5 5.8 26 139-164 120-145 (308)
168 cd05623 STKc_MRCK_alpha Cataly 96.7 0.0066 1.4E-07 51.7 7.3 26 139-164 122-147 (332)
169 cd07869 STKc_PFTAIRE1 Catalyti 96.7 0.0092 2E-07 50.0 8.1 26 139-164 123-148 (303)
170 cd06619 PKc_MKK5 Catalytic dom 96.7 0.0054 1.2E-07 50.7 6.6 26 139-164 115-140 (279)
171 cd06638 STKc_myosinIIIA Cataly 96.7 0.0084 1.8E-07 49.5 7.8 26 139-164 144-169 (286)
172 cd05033 PTKc_EphR Catalytic do 96.7 0.01 2.2E-07 48.6 8.1 26 139-164 126-151 (266)
173 cd05087 PTKc_Aatyk1_Aatyk3 Cat 96.7 0.0069 1.5E-07 49.7 7.2 26 139-164 120-145 (269)
174 cd05616 STKc_cPKC_beta Catalyt 96.7 0.0052 1.1E-07 52.1 6.6 26 139-164 121-146 (323)
175 cd05613 STKc_MSK1_N N-terminal 96.7 0.0085 1.9E-07 49.7 7.8 26 139-164 125-150 (290)
176 cd06631 STKc_YSK4 Catalytic do 96.7 0.0037 8E-08 51.1 5.4 26 139-164 122-147 (265)
177 cd06611 STKc_SLK_like Catalyti 96.6 0.009 1.9E-07 49.2 7.7 26 139-164 123-148 (280)
178 cd05619 STKc_nPKC_theta Cataly 96.6 0.0076 1.6E-07 51.0 7.4 26 139-164 116-141 (316)
179 cd08529 STKc_FA2-like Catalyti 96.6 0.017 3.7E-07 46.7 9.2 26 139-164 121-146 (256)
180 cd07862 STKc_CDK6 Catalytic do 96.6 0.0073 1.6E-07 50.1 7.1 26 139-164 130-155 (290)
181 PHA03211 serine/threonine kina 96.6 0.0076 1.6E-07 54.1 7.5 26 139-164 280-305 (461)
182 KOG0612 Rho-associated, coiled 96.6 0.0029 6.3E-08 60.9 5.0 27 138-164 194-220 (1317)
183 cd07873 STKc_PCTAIRE1 Catalyti 96.6 0.0081 1.8E-07 50.2 7.3 26 139-164 124-149 (301)
184 cd05586 STKc_Sck1_like Catalyt 96.6 0.01 2.2E-07 50.4 8.0 26 139-164 116-141 (330)
185 cd05603 STKc_SGK2 Catalytic do 96.6 0.0031 6.7E-08 53.4 4.8 26 139-164 116-141 (321)
186 smart00219 TyrKc Tyrosine kina 96.6 0.019 4.2E-07 46.3 9.3 26 139-164 123-148 (258)
187 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.6 0.0096 2.1E-07 49.2 7.6 26 139-164 127-152 (283)
188 cd05610 STKc_MASTL Catalytic d 96.6 0.0063 1.4E-07 57.2 7.1 26 139-164 124-149 (669)
189 cd05064 PTKc_EphR_A10 Catalyti 96.6 0.0092 2E-07 48.9 7.4 25 139-163 127-151 (266)
190 cd06627 STKc_Cdc7_like Catalyt 96.6 0.0063 1.4E-07 49.1 6.3 26 139-164 119-144 (254)
191 PHA03212 serine/threonine kina 96.6 0.0096 2.1E-07 52.2 7.7 26 139-164 202-227 (391)
192 cd08528 STKc_Nek10 Catalytic d 96.6 0.014 3.1E-07 47.6 8.4 27 138-164 133-159 (269)
193 cd05579 STKc_MAST_like Catalyt 96.6 0.005 1.1E-07 50.0 5.5 26 139-164 113-138 (265)
194 cd05570 STKc_PKC Catalytic dom 96.5 0.0094 2E-07 50.4 7.3 26 139-164 116-141 (318)
195 cd06917 STKc_NAK1_like Catalyt 96.5 0.012 2.6E-07 48.4 7.8 26 139-164 121-146 (277)
196 cd05583 STKc_MSK_N N-terminal 96.5 0.0073 1.6E-07 50.1 6.6 26 139-164 125-150 (288)
197 cd00192 PTKc Catalytic domain 96.5 0.017 3.6E-07 46.7 8.6 27 138-164 124-150 (262)
198 cd05607 STKc_GRK7 Catalytic do 96.5 0.0088 1.9E-07 49.5 6.9 26 139-164 115-140 (277)
199 cd06641 STKc_MST3 Catalytic do 96.5 0.016 3.5E-07 47.7 8.5 27 138-164 120-146 (277)
200 KOG0663 Protein kinase PITSLRE 96.5 0.0075 1.6E-07 51.0 6.2 37 139-175 197-235 (419)
201 cd08228 STKc_Nek6 Catalytic do 96.5 0.01 2.2E-07 48.5 7.1 26 139-164 126-151 (267)
202 KOG2269 Serine/threonine prote 96.5 0.0089 1.9E-07 50.8 6.7 36 3-44 333-368 (531)
203 cd05047 PTKc_Tie Catalytic dom 96.5 0.024 5.2E-07 46.5 9.4 27 138-164 131-157 (270)
204 cd05041 PTKc_Fes_like Catalyti 96.5 0.015 3.2E-07 47.0 8.0 26 139-164 113-138 (251)
205 cd05114 PTKc_Tec_Rlk Catalytic 96.5 0.015 3.2E-07 47.3 8.0 26 139-164 120-145 (256)
206 KOG1187 Serine/threonine prote 96.5 0.022 4.7E-07 49.5 9.3 103 2-163 118-221 (361)
207 cd05113 PTKc_Btk_Bmx Catalytic 96.5 0.013 2.8E-07 47.8 7.6 26 139-164 120-145 (256)
208 cd05069 PTKc_Yes Catalytic dom 96.5 0.011 2.3E-07 48.3 7.2 26 139-164 122-147 (260)
209 cd05071 PTKc_Src Catalytic dom 96.5 0.0092 2E-07 48.8 6.8 26 139-164 122-147 (262)
210 cd07848 STKc_CDKL5 Catalytic d 96.5 0.0073 1.6E-07 50.0 6.2 26 139-164 120-145 (287)
211 cd05083 PTKc_Chk Catalytic dom 96.5 0.0094 2E-07 48.4 6.7 27 138-164 119-145 (254)
212 cd06628 STKc_MAPKKK_Byr2_like 96.5 0.0049 1.1E-07 50.3 5.1 26 139-164 126-151 (267)
213 cd05095 PTKc_DDR2 Catalytic do 96.5 0.02 4.4E-07 47.7 8.9 40 2-45 66-105 (296)
214 cd05602 STKc_SGK1 Catalytic do 96.5 0.014 2.9E-07 49.6 7.9 26 139-164 116-141 (325)
215 cd08219 STKc_Nek3 Catalytic do 96.5 0.013 2.7E-07 47.6 7.5 26 139-164 120-145 (255)
216 cd05099 PTKc_FGFR4 Catalytic d 96.5 0.011 2.4E-07 49.8 7.3 26 139-164 154-179 (314)
217 cd08224 STKc_Nek6_Nek7 Catalyt 96.5 0.016 3.4E-07 47.2 8.0 26 139-164 126-151 (267)
218 cd06657 STKc_PAK4 Catalytic do 96.5 0.0063 1.4E-07 50.9 5.7 26 139-164 136-161 (292)
219 cd05052 PTKc_Abl Catalytic dom 96.4 0.014 3E-07 47.7 7.6 26 139-164 124-149 (263)
220 cd05055 PTKc_PDGFR Catalytic d 96.4 0.009 2E-07 50.1 6.6 41 2-45 85-125 (302)
221 cd05103 PTKc_VEGFR2 Catalytic 96.4 0.025 5.4E-07 48.4 9.4 27 138-164 198-224 (343)
222 cd05101 PTKc_FGFR2 Catalytic d 96.4 0.0067 1.4E-07 50.8 5.8 26 139-164 157-182 (304)
223 cd06643 STKc_SLK Catalytic dom 96.4 0.017 3.7E-07 47.6 8.2 26 139-164 123-148 (282)
224 cd05089 PTKc_Tie1 Catalytic do 96.4 0.023 5E-07 47.4 9.0 26 139-164 139-164 (297)
225 cd05065 PTKc_EphR_B Catalytic 96.4 0.016 3.4E-07 47.5 7.8 26 139-164 126-151 (269)
226 cd06605 PKc_MAPKK Catalytic do 96.4 0.014 3.1E-07 47.5 7.5 27 138-164 120-146 (265)
227 PHA03207 serine/threonine kina 96.4 0.0077 1.7E-07 52.7 6.2 26 139-164 205-230 (392)
228 cd05048 PTKc_Ror Catalytic Dom 96.4 0.016 3.5E-07 47.8 7.8 26 139-164 144-169 (283)
229 cd06642 STKc_STK25-YSK1 Cataly 96.4 0.014 3E-07 48.1 7.4 27 138-164 120-146 (277)
230 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 96.4 0.016 3.4E-07 47.9 7.7 26 139-164 128-153 (284)
231 cd06609 STKc_MST3_like Catalyt 96.4 0.018 3.9E-07 47.3 7.9 25 139-163 118-142 (274)
232 cd08227 PK_STRAD_alpha Pseudok 96.4 0.013 2.8E-07 49.7 7.2 25 139-163 121-145 (327)
233 cd06614 STKc_PAK Catalytic dom 96.4 0.013 2.9E-07 48.4 7.1 27 138-164 135-161 (286)
234 cd06632 STKc_MEKK1_plant Catal 96.4 0.0083 1.8E-07 48.5 5.7 26 139-164 122-147 (258)
235 cd05039 PTKc_Csk_like Catalyti 96.3 0.014 3E-07 47.4 7.0 26 139-164 122-147 (256)
236 cd05059 PTKc_Tec_like Catalyti 96.3 0.014 3.1E-07 47.4 7.1 26 139-164 120-145 (256)
237 cd05148 PTKc_Srm_Brk Catalytic 96.3 0.012 2.6E-07 47.9 6.6 26 139-164 124-149 (261)
238 cd06622 PKc_MAPKK_PBS2_like Ca 96.3 0.011 2.3E-07 49.0 6.3 27 138-164 122-148 (286)
239 cd05053 PTKc_FGFR Catalytic do 96.3 0.025 5.4E-07 46.9 8.6 27 138-164 151-177 (293)
240 cd06612 STKc_MST1_2 Catalytic 96.3 0.022 4.7E-07 46.1 8.0 26 139-164 119-144 (256)
241 cd05581 STKc_PDK1 Catalytic do 96.3 0.0086 1.9E-07 49.1 5.6 26 139-164 122-147 (280)
242 cd08221 STKc_Nek9 Catalytic do 96.3 0.012 2.6E-07 47.7 6.4 26 139-164 121-146 (256)
243 cd05045 PTKc_RET Catalytic dom 96.3 0.024 5.3E-07 47.0 8.4 26 138-163 146-171 (290)
244 cd05093 PTKc_TrkB Catalytic do 96.3 0.0099 2.1E-07 49.3 6.0 27 138-164 139-165 (288)
245 KOG0583 Serine/threonine prote 96.3 0.013 2.9E-07 50.9 7.0 28 137-164 138-166 (370)
246 cd05072 PTKc_Lyn Catalytic dom 96.3 0.014 3.1E-07 47.5 6.8 26 139-164 123-148 (261)
247 cd08215 STKc_Nek Catalytic dom 96.3 0.03 6.4E-07 45.1 8.7 26 139-164 123-148 (258)
248 cd06613 STKc_MAP4K3_like Catal 96.3 0.026 5.6E-07 45.8 8.3 26 139-164 121-146 (262)
249 cd06623 PKc_MAPKK_plant_like C 96.3 0.012 2.5E-07 47.8 6.2 27 138-164 119-145 (264)
250 cd05577 STKc_GRK Catalytic dom 96.3 0.0096 2.1E-07 49.1 5.7 26 139-164 115-140 (277)
251 cd05076 PTK_Tyk2_rpt1 Pseudoki 96.3 0.02 4.3E-07 47.3 7.6 38 4-45 65-102 (274)
252 cd06654 STKc_PAK1 Catalytic do 96.3 0.017 3.6E-07 48.3 7.2 26 139-164 136-161 (296)
253 cd05112 PTKc_Itk Catalytic dom 96.3 0.023 5E-07 46.0 7.8 26 139-164 120-145 (256)
254 cd05605 STKc_GRK4_like Catalyt 96.2 0.015 3.3E-07 48.3 6.8 26 139-164 122-147 (285)
255 cd05604 STKc_SGK3 Catalytic do 96.2 0.026 5.7E-07 47.8 8.4 26 139-164 116-141 (325)
256 PHA03210 serine/threonine kina 96.2 0.011 2.3E-07 53.6 6.3 26 139-164 287-312 (501)
257 cd05063 PTKc_EphR_A2 Catalytic 96.2 0.018 3.9E-07 47.1 7.1 26 139-164 127-152 (268)
258 cd06608 STKc_myosinIII_like Ca 96.2 0.025 5.5E-07 46.1 8.0 26 139-164 133-158 (275)
259 cd08217 STKc_Nek2 Catalytic do 96.2 0.027 5.9E-07 45.6 8.2 28 137-164 128-155 (265)
260 KOG0616 cAMP-dependent protein 96.2 0.034 7.4E-07 46.4 8.4 26 139-164 164-189 (355)
261 cd06652 STKc_MEKK2 Catalytic d 96.2 0.011 2.4E-07 48.3 5.8 26 139-164 126-151 (265)
262 cd08223 STKc_Nek4 Catalytic do 96.2 0.036 7.9E-07 44.8 8.7 26 139-164 122-147 (257)
263 cd05034 PTKc_Src_like Catalyti 96.2 0.019 4.1E-07 46.7 7.1 26 139-164 123-148 (261)
264 cd05092 PTKc_TrkA Catalytic do 96.2 0.015 3.2E-07 48.1 6.5 26 139-164 142-167 (280)
265 cd05631 STKc_GRK4 Catalytic do 96.2 0.016 3.5E-07 48.1 6.7 26 139-164 122-147 (285)
266 cd05100 PTKc_FGFR3 Catalytic d 96.2 0.022 4.7E-07 48.5 7.7 26 139-164 154-179 (334)
267 cd05046 PTK_CCK4 Pseudokinase 96.2 0.018 4E-07 47.2 7.0 40 2-45 55-94 (275)
268 cd06610 STKc_OSR1_SPAK Catalyt 96.2 0.018 3.8E-07 46.9 6.8 26 139-164 122-147 (267)
269 cd06620 PKc_MAPKK_Byr1_like Ca 96.2 0.02 4.2E-07 47.4 7.1 26 139-164 124-149 (284)
270 cd05098 PTKc_FGFR1 Catalytic d 96.2 0.021 4.4E-07 47.9 7.3 26 139-164 160-185 (307)
271 cd05632 STKc_GRK5 Catalytic do 96.2 0.018 3.8E-07 47.8 6.8 26 139-164 122-147 (285)
272 cd05123 STKc_AGC Catalytic dom 96.2 0.016 3.4E-07 46.7 6.3 27 138-164 112-138 (250)
273 cd05044 PTKc_c-ros Catalytic d 96.1 0.025 5.5E-07 46.1 7.6 26 139-164 126-156 (269)
274 cd07861 STKc_CDK1_euk Catalyti 96.1 0.015 3.3E-07 47.9 6.3 26 139-164 121-146 (285)
275 cd07870 STKc_PFTAIRE2 Catalyti 96.1 0.04 8.7E-07 45.7 8.8 26 139-164 123-148 (291)
276 PHA02988 hypothetical protein; 96.1 0.021 4.5E-07 47.5 7.0 42 2-46 65-109 (283)
277 cd05572 STKc_cGK_PKG Catalytic 96.1 0.013 2.8E-07 47.7 5.7 27 138-164 112-138 (262)
278 cd06646 STKc_MAP4K5 Catalytic 96.1 0.025 5.4E-07 46.2 7.3 26 139-164 126-151 (267)
279 cd05038 PTKc_Jak_rpt2 Catalyti 96.1 0.035 7.7E-07 45.6 8.2 26 139-164 129-154 (284)
280 KOG1163 Casein kinase (serine/ 96.1 0.047 1E-06 44.4 8.4 39 2-43 57-95 (341)
281 cd05057 PTKc_EGFR_like Catalyt 96.1 0.034 7.4E-07 45.8 8.1 27 138-164 128-154 (279)
282 cd05056 PTKc_FAK Catalytic dom 96.1 0.034 7.3E-07 45.5 7.9 26 139-164 127-152 (270)
283 cd05086 PTKc_Aatyk2 Catalytic 96.1 0.019 4.1E-07 47.1 6.4 26 139-164 119-144 (268)
284 cd07846 STKc_CDKL2_3 Catalytic 96.0 0.015 3.2E-07 48.0 5.8 26 139-164 120-145 (286)
285 cd07837 STKc_CdkB_plant Cataly 96.0 0.035 7.6E-07 46.0 8.0 26 139-164 130-156 (295)
286 cd07847 STKc_CDKL1_4 Catalytic 96.0 0.029 6.2E-07 46.2 7.3 26 138-163 119-144 (286)
287 cd05606 STKc_beta_ARK Catalyti 96.0 0.027 5.9E-07 46.5 7.2 26 139-164 117-142 (278)
288 cd06639 STKc_myosinIIIB Cataly 96.0 0.034 7.3E-07 46.1 7.7 26 139-164 148-173 (291)
289 cd08229 STKc_Nek7 Catalytic do 96.0 0.02 4.4E-07 46.7 6.3 26 139-164 126-151 (267)
290 cd06655 STKc_PAK2 Catalytic do 96.0 0.037 8E-07 46.2 8.0 26 139-164 135-160 (296)
291 cd06616 PKc_MKK4 Catalytic dom 96.0 0.04 8.7E-07 45.5 8.1 27 138-164 127-153 (288)
292 KOG0198 MEKK and related serin 95.9 0.033 7.2E-07 47.2 7.4 28 137-164 135-163 (313)
293 cd05611 STKc_Rim15_like Cataly 95.9 0.017 3.6E-07 47.0 5.4 26 139-164 117-142 (260)
294 cd05067 PTKc_Lck_Blk Catalytic 95.9 0.037 8E-07 45.0 7.5 26 139-164 122-147 (260)
295 cd05037 PTK_Jak_rpt1 Pseudokin 95.9 0.044 9.5E-07 44.3 7.9 26 139-164 121-153 (259)
296 cd05060 PTKc_Syk_like Catalyti 95.9 0.042 9.2E-07 44.6 7.8 26 139-164 115-140 (257)
297 PTZ00024 cyclin-dependent prot 95.9 0.025 5.4E-07 48.0 6.7 26 139-164 139-164 (335)
298 cd06621 PKc_MAPKK_Pek1_like Ca 95.9 0.026 5.7E-07 46.8 6.6 26 139-164 125-150 (287)
299 cd06606 STKc_MAPKKK Catalytic 95.9 0.031 6.6E-07 44.9 6.7 27 138-164 120-146 (260)
300 cd06635 STKc_TAO1 Catalytic do 95.8 0.046 1E-06 46.1 8.0 26 139-164 145-170 (317)
301 cd06648 STKc_PAK_II Catalytic 95.8 0.045 9.8E-07 45.4 7.8 26 139-164 135-160 (285)
302 cd05051 PTKc_DDR Catalytic dom 95.8 0.032 6.9E-07 46.3 6.9 26 139-164 150-175 (296)
303 cd08218 STKc_Nek1 Catalytic do 95.8 0.029 6.4E-07 45.4 6.6 26 139-164 121-146 (256)
304 cd07832 STKc_CCRK Catalytic do 95.8 0.036 7.7E-07 45.6 7.0 26 139-164 119-144 (286)
305 cd06659 STKc_PAK6 Catalytic do 95.8 0.029 6.4E-07 46.9 6.5 26 139-164 137-162 (297)
306 PTZ00266 NIMA-related protein 95.8 0.031 6.7E-07 54.4 7.3 41 2-45 59-100 (1021)
307 cd05073 PTKc_Hck Catalytic dom 95.8 0.033 7.2E-07 45.3 6.7 26 139-164 122-147 (260)
308 cd07836 STKc_Pho85 Catalytic d 95.7 0.035 7.5E-07 45.7 6.7 25 139-163 120-144 (284)
309 KOG2345 Serine/threonine prote 95.7 0.026 5.6E-07 45.9 5.6 44 118-164 131-174 (302)
310 KOG0594 Protein kinase PCTAIRE 95.7 0.0067 1.5E-07 51.1 2.4 36 137-172 138-175 (323)
311 KOG1151 Tousled-like protein k 95.7 0.064 1.4E-06 47.3 8.3 44 118-164 572-618 (775)
312 cd05050 PTKc_Musk Catalytic do 95.7 0.064 1.4E-06 44.4 8.2 27 138-164 149-175 (288)
313 cd07844 STKc_PCTAIRE_like Cata 95.7 0.037 8E-07 45.8 6.8 26 139-164 123-148 (291)
314 cd05630 STKc_GRK6 Catalytic do 95.7 0.046 9.9E-07 45.4 7.3 27 138-164 121-147 (285)
315 KOG0596 Dual specificity; seri 95.7 0.053 1.2E-06 48.8 7.8 38 2-42 406-443 (677)
316 cd07833 STKc_CDKL Catalytic do 95.7 0.035 7.7E-07 45.7 6.6 25 139-163 120-144 (288)
317 cd06626 STKc_MEKK4 Catalytic d 95.7 0.037 8.1E-07 44.9 6.6 26 139-164 119-144 (264)
318 KOG0581 Mitogen-activated prot 95.7 0.077 1.7E-06 45.3 8.5 28 137-164 197-224 (364)
319 cd06633 STKc_TAO3 Catalytic do 95.7 0.093 2E-06 44.2 9.1 26 139-164 141-166 (313)
320 cd07860 STKc_CDK2_3 Catalytic 95.6 0.03 6.6E-07 46.1 5.9 26 139-164 120-145 (284)
321 cd06624 STKc_ASK Catalytic dom 95.6 0.071 1.5E-06 43.6 8.1 26 139-164 128-154 (268)
322 PF10009 DUF2252: Uncharacteri 95.6 0.02 4.4E-07 50.0 4.9 59 135-193 40-119 (385)
323 KOG0607 MAP kinase-interacting 95.6 0.034 7.3E-07 47.0 5.8 48 4-64 124-171 (463)
324 KOG4250 TANK binding protein k 95.6 0.089 1.9E-06 48.6 9.0 26 139-164 140-169 (732)
325 cd05578 STKc_Yank1 Catalytic d 95.6 0.024 5.3E-07 46.0 5.1 26 139-164 120-145 (258)
326 cd05077 PTK_Jak1_rpt1 Pseudoki 95.5 0.083 1.8E-06 43.2 8.2 19 138-156 124-142 (262)
327 cd07838 STKc_CDK4_6_like Catal 95.5 0.072 1.5E-06 43.8 7.9 26 139-164 127-152 (287)
328 cd08226 PK_STRAD_beta Pseudoki 95.4 0.04 8.6E-07 46.8 6.1 25 139-163 121-145 (328)
329 cd05078 PTK_Jak2_Jak3_rpt1 Pse 95.4 0.057 1.2E-06 43.9 6.7 18 139-156 120-137 (258)
330 PHA03390 pk1 serine/threonine- 95.3 0.089 1.9E-06 43.2 7.7 26 139-164 129-155 (267)
331 cd06653 STKc_MEKK3_like_1 Cata 95.3 0.066 1.4E-06 43.7 6.8 26 139-164 126-151 (264)
332 cd08220 STKc_Nek8 Catalytic do 95.3 0.061 1.3E-06 43.4 6.5 26 139-164 121-147 (256)
333 PLN00009 cyclin-dependent kina 95.2 0.079 1.7E-06 43.9 7.1 38 2-43 48-85 (294)
334 cd08530 STKc_CNK2-like Catalyt 95.2 0.12 2.5E-06 41.7 7.9 26 139-164 123-148 (256)
335 cd07855 STKc_ERK5 Catalytic do 95.2 0.041 8.9E-07 46.8 5.4 26 139-164 127-152 (334)
336 PLN00113 leucine-rich repeat r 95.1 0.054 1.2E-06 53.0 6.7 39 4-46 732-770 (968)
337 cd06647 STKc_PAK_I Catalytic d 95.1 0.096 2.1E-06 43.6 7.3 26 139-164 135-160 (293)
338 cd08225 STKc_Nek5 Catalytic do 95.1 0.045 9.7E-07 44.2 5.2 40 2-45 46-85 (257)
339 cd05036 PTKc_ALK_LTK Catalytic 95.0 0.098 2.1E-06 43.0 7.1 25 139-163 136-163 (277)
340 cd06630 STKc_MEKK1 Catalytic d 95.0 0.089 1.9E-06 42.8 6.8 26 139-164 123-149 (268)
341 cd06651 STKc_MEKK3 Catalytic d 95.0 0.087 1.9E-06 43.0 6.7 26 139-164 126-151 (266)
342 KOG0599 Phosphorylase kinase g 95.0 0.077 1.7E-06 44.0 6.0 97 139-236 143-268 (411)
343 KOG0587 Traf2- and Nck-interac 94.9 0.18 3.8E-06 47.9 9.0 41 3-45 63-107 (953)
344 PHA02882 putative serine/threo 94.7 0.023 4.9E-07 47.5 2.6 27 138-164 145-171 (294)
345 KOG0197 Tyrosine kinases [Sign 94.7 0.081 1.7E-06 47.0 5.9 35 138-172 322-358 (468)
346 KOG0658 Glycogen synthase kina 94.6 0.022 4.8E-07 48.5 2.2 27 138-164 144-171 (364)
347 cd07831 STKc_MOK Catalytic dom 94.5 0.22 4.9E-06 40.7 8.0 24 139-163 120-143 (282)
348 KOG0984 Mitogen-activated prot 94.4 0.025 5.3E-07 45.0 2.0 29 136-164 166-194 (282)
349 KOG0667 Dual-specificity tyros 94.4 0.029 6.4E-07 50.9 2.7 36 137-172 307-346 (586)
350 KOG0659 Cdk activating kinase 94.1 0.034 7.4E-07 45.7 2.2 33 138-170 120-154 (318)
351 KOG0600 Cdc2-related protein k 94.1 0.32 6.9E-06 43.5 8.2 26 138-163 237-262 (560)
352 cd07876 STKc_JNK2 Catalytic do 94.0 0.032 7E-07 48.0 2.1 27 138-164 142-168 (359)
353 KOG0032 Ca2+/calmodulin-depend 93.9 0.23 5E-06 43.4 7.2 41 2-45 82-122 (382)
354 PF00069 Pkinase: Protein kina 93.9 0.025 5.4E-07 45.7 1.1 26 139-164 118-143 (260)
355 cd07874 STKc_JNK3 Catalytic do 93.9 0.039 8.4E-07 47.4 2.3 27 138-164 138-164 (355)
356 cd07863 STKc_CDK4 Catalytic do 93.9 0.037 8E-07 45.7 2.1 27 138-164 127-153 (288)
357 KOG4236 Serine/threonine prote 93.8 0.42 9E-06 43.3 8.4 37 2-44 610-648 (888)
358 cd07878 STKc_p38beta_MAPK11 Ca 93.7 0.044 9.6E-07 46.7 2.4 27 138-164 137-163 (343)
359 cd05575 STKc_SGK Catalytic dom 93.7 0.034 7.4E-07 47.1 1.6 26 139-164 116-141 (323)
360 KOG1165 Casein kinase (serine/ 93.7 0.44 9.6E-06 40.7 8.0 38 2-42 70-107 (449)
361 cd07875 STKc_JNK1 Catalytic do 93.6 0.046 1E-06 47.1 2.4 27 138-164 145-171 (364)
362 PF10707 YrbL-PhoP_reg: PhoP r 93.6 0.85 1.8E-05 36.1 9.2 42 2-44 58-102 (199)
363 PHA03209 serine/threonine kina 93.6 0.047 1E-06 47.1 2.2 26 139-164 177-202 (357)
364 KOG0603 Ribosomal protein S6 k 93.5 0.048 1E-06 49.6 2.2 27 138-164 434-461 (612)
365 COG2112 Predicted Ser/Thr prot 93.4 0.057 1.2E-06 41.9 2.2 38 2-46 62-99 (201)
366 KOG0694 Serine/threonine prote 93.4 0.18 4E-06 46.4 5.7 26 139-164 488-513 (694)
367 cd05091 PTKc_Ror2 Catalytic do 93.3 0.054 1.2E-06 44.6 2.2 27 138-164 143-169 (283)
368 cd07853 STKc_NLK Catalytic dom 93.3 0.059 1.3E-06 46.6 2.5 27 138-164 122-148 (372)
369 cd05075 PTKc_Axl Catalytic dom 93.2 0.049 1.1E-06 44.5 1.7 26 139-164 132-157 (272)
370 cd05108 PTKc_EGFR Catalytic do 93.0 0.06 1.3E-06 45.3 2.1 26 139-164 129-154 (316)
371 cd08222 STKc_Nek11 Catalytic d 93.0 0.21 4.6E-06 40.4 5.3 25 139-164 126-150 (260)
372 KOG1164 Casein kinase (serine/ 93.0 0.58 1.2E-05 39.8 8.0 41 2-42 63-104 (322)
373 cd07859 STKc_TDY_MAPK_plant Ca 92.9 0.055 1.2E-06 45.9 1.7 26 139-164 123-148 (338)
374 cd05109 PTKc_HER2 Catalytic do 92.9 0.064 1.4E-06 44.1 2.1 26 139-164 129-154 (279)
375 KOG0588 Serine/threonine prote 92.8 0.47 1E-05 43.9 7.4 40 2-45 59-98 (786)
376 cd05054 PTKc_VEGFR Catalytic d 92.8 0.075 1.6E-06 45.4 2.4 26 139-164 193-218 (337)
377 cd05576 STKc_RPK118_like Catal 92.8 0.069 1.5E-06 43.0 2.0 27 138-164 104-130 (237)
378 cd06617 PKc_MKK3_6 Catalytic d 92.7 0.094 2E-06 43.1 2.7 28 137-164 122-149 (283)
379 cd05111 PTK_HER3 Pseudokinase 92.7 0.099 2.1E-06 43.1 2.9 27 138-164 128-154 (279)
380 cd05116 PTKc_Syk Catalytic dom 92.4 0.089 1.9E-06 42.7 2.2 27 138-164 114-140 (257)
381 KOG3653 Transforming growth fa 92.4 0.28 6E-06 43.5 5.2 73 136-210 333-411 (534)
382 KOG0664 Nemo-like MAPK-related 92.3 0.083 1.8E-06 43.7 1.9 34 137-170 174-208 (449)
383 PTZ00283 serine/threonine prot 92.2 0.076 1.7E-06 48.1 1.7 27 138-164 162-188 (496)
384 cd07839 STKc_CDK5 Catalytic do 92.1 0.091 2E-06 43.3 1.9 27 138-164 118-144 (284)
385 cd07834 STKc_MAPK Catalytic do 92.0 0.099 2.2E-06 44.2 2.1 26 139-164 123-148 (330)
386 cd07841 STKc_CDK7 Catalytic do 92.0 0.13 2.8E-06 42.7 2.8 26 139-164 122-147 (298)
387 cd05040 PTKc_Ack_like Catalyti 91.8 0.13 2.9E-06 41.5 2.6 26 139-164 117-142 (257)
388 cd06618 PKc_MKK7 Catalytic dom 91.7 0.11 2.5E-06 43.1 2.2 27 138-164 134-160 (296)
389 cd05110 PTKc_HER4 Catalytic do 91.7 0.17 3.6E-06 42.3 3.1 27 138-164 128-154 (303)
390 cd07850 STKc_JNK Catalytic dom 91.6 0.087 1.9E-06 45.2 1.4 26 139-164 138-163 (353)
391 cd05035 PTKc_Axl_like Catalyti 91.6 0.11 2.4E-06 42.3 2.0 26 139-164 133-158 (273)
392 cd07857 STKc_MPK1 Catalytic do 91.6 0.099 2.2E-06 44.4 1.7 27 138-164 124-150 (332)
393 COG5072 ALK1 Serine/threonine 91.6 0.078 1.7E-06 45.9 1.0 84 136-220 339-433 (488)
394 cd07835 STKc_CDK1_like Catalyt 91.6 0.11 2.4E-06 42.7 1.9 27 138-164 118-144 (283)
395 cd07867 STKc_CDC2L6 Catalytic 91.5 0.12 2.7E-06 43.2 2.2 26 139-164 128-157 (317)
396 KOG0660 Mitogen-activated prot 91.5 0.12 2.5E-06 44.1 1.9 29 136-164 142-170 (359)
397 cd07830 STKc_MAK_like Catalyti 91.5 0.13 2.9E-06 42.2 2.3 25 139-163 119-143 (283)
398 cd05118 STKc_CMGC Catalytic do 91.4 0.12 2.5E-06 42.4 1.8 27 138-164 117-143 (283)
399 PLN03225 Serine/threonine-prot 91.4 0.12 2.6E-06 47.7 2.1 27 138-164 274-301 (566)
400 KOG0591 NIMA (never in mitosis 91.2 0.58 1.2E-05 39.1 5.6 26 137-162 146-171 (375)
401 cd05058 PTKc_Met_Ron Catalytic 91.2 0.13 2.8E-06 41.7 2.0 27 138-164 117-143 (262)
402 KOG0983 Mitogen-activated prot 91.2 0.16 3.6E-06 42.1 2.4 28 136-163 209-236 (391)
403 cd06658 STKc_PAK5 Catalytic do 91.1 0.1 2.3E-06 43.4 1.3 26 139-164 138-163 (292)
404 cd05070 PTKc_Fyn_Yrk Catalytic 91.1 0.13 2.8E-06 41.8 1.8 26 139-164 122-147 (260)
405 cd07866 STKc_BUR1 Catalytic do 91.1 0.13 2.7E-06 42.9 1.8 26 139-164 135-160 (311)
406 PTZ00284 protein kinase; Provi 91.1 0.15 3.1E-06 45.8 2.3 19 138-156 251-269 (467)
407 cd07868 STKc_CDK8 Catalytic do 91.0 0.14 3.1E-06 43.0 2.1 26 139-164 128-157 (317)
408 smart00220 S_TKc Serine/Threon 90.9 0.12 2.6E-06 40.9 1.4 26 139-164 107-132 (244)
409 cd06637 STKc_TNIK Catalytic do 90.7 0.11 2.5E-06 42.3 1.2 26 139-164 131-156 (272)
410 KOG1166 Mitotic checkpoint ser 90.7 0.18 3.8E-06 49.0 2.5 29 137-165 812-847 (974)
411 KOG0593 Predicted protein kina 90.5 0.16 3.4E-06 42.8 1.8 39 139-177 121-164 (396)
412 PLN03224 probable serine/threo 90.5 0.21 4.6E-06 45.4 2.8 26 139-164 329-354 (507)
413 cd07840 STKc_CDK9_like Catalyt 90.5 0.14 3.1E-06 41.9 1.6 26 139-164 120-145 (287)
414 cd06636 STKc_MAP4K4_6 Catalyti 90.5 0.17 3.7E-06 41.6 2.0 27 138-164 140-166 (282)
415 PTZ00036 glycogen synthase kin 90.5 0.15 3.3E-06 45.4 1.8 27 138-164 189-216 (440)
416 PF07387 Seadorna_VP7: Seadorn 90.5 0.21 4.6E-06 40.4 2.4 31 135-165 159-189 (308)
417 cd07880 STKc_p38gamma_MAPK12 C 90.4 0.18 4E-06 43.0 2.2 27 138-164 137-163 (343)
418 KOG1236 Predicted unusual prot 90.2 0.13 2.8E-06 45.2 1.1 23 140-162 366-392 (565)
419 cd06607 STKc_TAO Catalytic dom 90.2 0.23 5E-06 41.5 2.6 27 138-164 134-160 (307)
420 cd07843 STKc_CDC2L1 Catalytic 90.2 0.17 3.8E-06 41.9 1.8 26 139-164 126-151 (293)
421 KOG0670 U4/U6-associated splic 90.1 0.2 4.4E-06 45.0 2.2 34 137-170 554-590 (752)
422 cd07879 STKc_p38delta_MAPK13 C 89.9 0.16 3.5E-06 43.4 1.5 26 139-164 137-162 (342)
423 smart00221 STYKc Protein kinas 89.8 0.17 3.8E-06 39.6 1.5 26 139-164 118-143 (225)
424 PHA00451 protein kinase 89.8 0.24 5.1E-06 40.8 2.2 31 140-170 190-220 (362)
425 KOG1035 eIF-2alpha kinase GCN2 89.7 0.44 9.6E-06 46.9 4.3 26 138-163 716-741 (1351)
426 KOG0585 Ca2+/calmodulin-depend 89.6 0.23 4.9E-06 44.2 2.1 27 138-164 229-255 (576)
427 cd07849 STKc_ERK1_2_like Catal 89.6 0.18 3.8E-06 42.9 1.5 26 139-164 126-151 (336)
428 cd08216 PK_STRAD Pseudokinase 89.6 0.26 5.7E-06 41.2 2.5 25 139-163 121-145 (314)
429 KOG0575 Polo-like serine/threo 89.5 1.9 4.1E-05 39.5 7.8 25 139-163 138-162 (592)
430 cd07877 STKc_p38alpha_MAPK14 C 89.3 0.23 4.9E-06 42.5 2.0 26 139-164 140-165 (345)
431 cd05074 PTKc_Tyro3 Catalytic d 89.3 0.25 5.3E-06 40.3 2.0 27 138-164 132-158 (273)
432 PLN00181 protein SPA1-RELATED; 89.3 0.37 8E-06 46.3 3.5 27 137-163 98-124 (793)
433 PF12260 PIP49_C: Protein-kina 89.2 3.9 8.5E-05 32.0 8.7 36 3-45 7-42 (188)
434 cd07845 STKc_CDK10 Catalytic d 89.1 0.19 4E-06 42.1 1.2 26 139-164 128-153 (309)
435 cd05032 PTKc_InsR_like Catalyt 89.0 0.25 5.4E-06 40.4 1.9 27 138-164 138-164 (277)
436 cd07864 STKc_CDK12 Catalytic d 88.9 0.23 5E-06 41.2 1.7 25 139-163 136-160 (302)
437 cd07829 STKc_CDK_like Catalyti 88.9 0.31 6.8E-06 39.8 2.5 26 139-164 118-143 (282)
438 PF14531 Kinase-like: Kinase-l 88.8 0.24 5.2E-06 41.5 1.6 35 137-171 163-199 (288)
439 cd07858 STKc_TEY_MAPK_plant Ca 88.7 0.26 5.7E-06 41.9 1.9 27 138-164 127-153 (337)
440 KOG1152 Signal transduction se 88.6 0.33 7.2E-06 44.2 2.4 39 137-175 688-728 (772)
441 cd07842 STKc_CDK8_like Catalyt 88.5 0.24 5.2E-06 41.4 1.5 26 139-164 128-157 (316)
442 cd07851 STKc_p38 Catalytic dom 88.5 0.27 5.8E-06 42.0 1.8 27 138-164 137-163 (343)
443 cd07856 STKc_Sty1_Hog1 Catalyt 88.4 0.3 6.6E-06 41.4 2.1 27 138-164 127-153 (328)
444 cd06645 STKc_MAP4K3 Catalytic 88.4 0.23 5E-06 40.4 1.3 26 139-164 126-151 (267)
445 cd07852 STKc_MAPK15 Catalytic 88.3 0.28 6.1E-06 41.6 1.8 26 138-163 126-151 (337)
446 KOG0586 Serine/threonine prote 88.3 2 4.2E-05 39.4 7.1 71 137-209 173-248 (596)
447 cd06634 STKc_TAO2 Catalytic do 88.2 0.27 5.9E-06 41.2 1.6 26 139-164 135-160 (308)
448 KOG0584 Serine/threonine prote 88.0 1 2.2E-05 41.3 5.1 36 117-155 146-181 (632)
449 cd05043 PTK_Ryk Pseudokinase d 87.8 0.3 6.5E-06 40.1 1.7 27 138-164 136-162 (280)
450 cd07865 STKc_CDK9 Catalytic do 87.3 0.33 7.1E-06 40.4 1.6 26 139-164 139-164 (310)
451 KOG1006 Mitogen-activated prot 87.3 0.37 8E-06 39.9 1.8 26 139-164 188-213 (361)
452 KOG0668 Casein kinase II, alph 87.2 0.37 8E-06 39.1 1.7 29 136-164 149-178 (338)
453 KOG1026 Nerve growth factor re 87.2 4 8.8E-05 38.7 8.6 39 2-44 536-574 (774)
454 KOG1167 Serine/threonine prote 87.1 0.9 1.9E-05 39.6 4.1 29 136-164 149-178 (418)
455 cd05107 PTKc_PDGFR_beta Cataly 86.2 0.54 1.2E-05 41.4 2.4 41 3-46 88-128 (401)
456 KOG0582 Ste20-like serine/thre 85.8 0.55 1.2E-05 41.5 2.2 27 137-163 144-170 (516)
457 KOG0662 Cyclin-dependent kinas 85.8 0.42 9.1E-06 37.2 1.3 33 139-171 121-155 (292)
458 KOG0666 Cyclin C-dependent kin 85.4 0.36 7.9E-06 40.8 0.9 36 139-174 152-193 (438)
459 KOG0661 MAPK related serine/th 84.7 7.2 0.00016 35.0 8.5 57 116-177 112-172 (538)
460 KOG0665 Jun-N-terminal kinase 84.2 0.62 1.3E-05 39.5 1.7 28 137-164 136-163 (369)
461 KOG2052 Activin A type IB rece 83.0 0.88 1.9E-05 40.2 2.2 33 129-162 327-359 (513)
462 KOG0986 G protein-coupled rece 82.7 5.2 0.00011 35.8 6.8 40 3-46 233-272 (591)
463 KOG0669 Cyclin T-dependent kin 81.8 0.68 1.5E-05 38.1 1.1 27 137-163 142-168 (376)
464 KOG0579 Ste20-like serine/thre 81.7 0.84 1.8E-05 42.4 1.7 25 139-163 150-174 (1187)
465 PF07714 Pkinase_Tyr: Protein 80.7 1 2.2E-05 36.6 1.8 24 140-163 124-147 (259)
466 KOG4278 Protein tyrosine kinas 80.2 4.4 9.5E-05 37.8 5.6 25 139-163 385-409 (1157)
467 KOG0193 Serine/threonine prote 79.9 1.1 2.4E-05 41.1 1.8 27 137-163 506-532 (678)
468 KOG4158 BRPK/PTEN-induced prot 78.9 2.1 4.5E-05 37.7 3.1 34 136-169 358-395 (598)
469 smart00146 PI3Kc Phosphoinosit 77.6 1.9 4E-05 34.2 2.3 29 139-167 102-130 (202)
470 KOG0589 Serine/threonine prote 77.5 10 0.00022 33.7 7.0 25 139-163 126-150 (426)
471 KOG0578 p21-activated serine/t 77.2 1.7 3.7E-05 39.3 2.2 27 137-163 387-413 (550)
472 KOG0577 Serine/threonine prote 76.9 1.3 2.7E-05 40.9 1.3 25 139-163 146-170 (948)
473 COG4320 Uncharacterized protei 76.9 3.7 8E-05 34.8 3.9 66 127-194 49-135 (410)
474 KOG1240 Protein kinase contain 76.6 0.96 2.1E-05 44.5 0.5 30 136-165 137-166 (1431)
475 KOG0611 Predicted serine/threo 76.6 1.5 3.3E-05 38.5 1.6 28 137-164 171-198 (668)
476 cd07854 STKc_MAPK4_6 Catalytic 76.5 1.1 2.4E-05 38.2 0.8 26 139-164 134-160 (342)
477 cd05172 PIKKc_DNA-PK DNA-depen 73.6 2.4 5.2E-05 34.5 2.1 33 136-168 134-167 (235)
478 KOG0194 Protein tyrosine kinas 73.4 5.7 0.00012 35.8 4.5 60 2-65 208-283 (474)
479 KOG1027 Serine/threonine prote 72.4 2.4 5.1E-05 40.4 1.9 27 138-164 625-656 (903)
480 cd05168 PI4Kc_III_beta Phospho 71.9 2.6 5.7E-05 35.5 1.9 32 137-168 140-171 (293)
481 KOG0590 Checkpoint kinase and 71.5 3.1 6.6E-05 38.8 2.5 28 137-164 438-465 (601)
482 cd00891 PI3Kc Phosphoinositide 70.8 2.5 5.5E-05 36.6 1.6 32 137-168 202-233 (352)
483 cd00142 PI3Kc_like Phosphoinos 69.7 3.3 7.1E-05 33.2 2.0 32 137-168 127-159 (219)
484 cd05170 PIKKc_SMG1 Suppressor 69.6 3.3 7.1E-05 35.1 2.1 32 137-168 208-240 (307)
485 KOG4721 Serine/threonine prote 69.2 2.7 5.9E-05 38.6 1.5 26 139-164 232-257 (904)
486 cd00893 PI4Kc_III Phosphoinosi 68.9 3.4 7.4E-05 34.7 2.0 32 137-168 138-169 (289)
487 cd00892 PIKKc_ATR ATR (Ataxia 68.8 3.6 7.8E-05 33.5 2.1 32 137-168 138-170 (237)
488 PHA03111 Ser/Thr kinase; Provi 68.7 4.1 9E-05 35.1 2.4 23 135-157 299-321 (444)
489 KOG1094 Discoidin domain recep 67.9 3.1 6.7E-05 38.4 1.6 26 138-163 656-681 (807)
490 cd05164 PIKKc Phosphoinositide 67.3 3.9 8.4E-05 33.0 1.9 31 137-167 130-161 (222)
491 cd05171 PIKKc_ATM Ataxia telan 66.7 4.2 9.2E-05 34.0 2.1 32 137-168 180-212 (279)
492 cd05167 PI4Kc_III_alpha Phosph 66.5 4 8.6E-05 34.7 1.9 33 136-168 158-190 (311)
493 KOG0580 Serine/threonine prote 66.2 3.8 8.3E-05 33.5 1.7 28 136-163 141-168 (281)
494 cd05166 PI3Kc_II Phosphoinosit 65.9 4.4 9.5E-05 35.1 2.1 32 137-168 201-232 (353)
495 cd05169 PIKKc_TOR TOR (Target 65.3 3.6 7.8E-05 34.4 1.5 30 136-165 179-209 (280)
496 cd05070 PTKc_Fyn_Yrk Catalytic 65.2 14 0.0003 29.7 4.9 59 2-65 48-123 (260)
497 cd00896 PI3Kc_III Phosphoinosi 65.2 4 8.7E-05 35.3 1.7 32 137-168 201-232 (350)
498 COG0515 SPS1 Serine/threonine 64.8 3.4 7.3E-05 33.5 1.2 26 139-164 121-147 (384)
499 PF05445 Pox_ser-thr_kin: Poxv 64.7 5.3 0.00011 34.6 2.3 22 135-156 295-316 (434)
500 KOG1345 Serine/threonine kinas 63.0 4.8 0.0001 33.7 1.7 27 138-164 140-168 (378)
No 1
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=4.6e-52 Score=324.64 Aligned_cols=230 Identities=40% Similarity=0.754 Sum_probs=211.8
Q ss_pred ChHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-chHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 026343 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 79 (240)
Q Consensus 1 ~~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g 79 (240)
||.+|+.-|+++++...+.||+||.++.. .+..|+||||++-.+++ ..+.++|+.||+||....+ ..|||..++++|
T Consensus 54 ~f~AEa~gL~~la~s~ti~VP~vi~~G~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~-~~fG~d~dn~iG 131 (286)
T COG3001 54 MFTAEADGLELLARSNTITVPKVIAVGAS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQ-AQFGLDFDNYIG 131 (286)
T ss_pred HHHHHHHHHHHHHhcCCccccceEEecCC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCc-cccCcccccccC
Confidence 68999999999999877999999999976 67899999999988776 5689999999999998864 479999999999
Q ss_pred cccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeE
Q 026343 80 STPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 159 (240)
Q Consensus 80 ~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~ 159 (240)
.+||.|.|+++|..||.++|+..+++.+.+++++- ..++.+++.+++++.++..+|.|+|||||.||+.+..+| ++
T Consensus 132 ~t~QpN~W~~~Wa~FfaeqRig~qlqlar~rg~~f---~did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv 207 (286)
T COG3001 132 TTPQPNTWQRRWATFFAEQRIGWQLQLARERGLTF---GDIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PV 207 (286)
T ss_pred CCCCCCCCcchHHHHHHHhhhhHHHHHHHHhCCCc---cCHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-Ce
Confidence 99999999999999999999999999999887642 233677788888888877889999999999999998888 99
Q ss_pred EEccCCCCCchhhhhHhh-hhcCCCHHHHHHhhhcCCCCcCHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026343 160 ILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 236 (240)
Q Consensus 160 iiD~~~~~Gd~~~Dla~~-~~~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l~~~~~~g~~~~~~~~~~~~~~~~ 236 (240)
++|++|+|||+++|||++ .|++|+++|++||.++.|++.++++|..+|+||.+|+|+..||..|.++++.+++++|+
T Consensus 208 ~fDPA~y~GDrE~Dlam~elFggfp~efy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~ 285 (286)
T COG3001 208 IFDPACYWGDRECDLAMLELFGGFPPEFYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285 (286)
T ss_pred eeccccccCCcccceehhhhhcCCcHHHHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 999999999999999998 57899999999999999999999999999999999999999999999999999999985
No 2
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=100.00 E-value=1.3e-50 Score=336.35 Aligned_cols=231 Identities=46% Similarity=0.842 Sum_probs=174.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC-CchHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 026343 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 79 (240)
Q Consensus 1 ~~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~-~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g 79 (240)
||+.|++.|++|++..++.||+|+.++.. .+..|+||||++..+. ...++++|+.||+||+.. +.+.|||+.++++|
T Consensus 55 ~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~-~~~~FGf~~~~~~G 132 (288)
T PF03881_consen 55 MFEGEAEGLKALAEANPIRVPKVIAWGEY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWS-PAGKFGFPVDTYIG 132 (288)
T ss_dssp HHHHHHHHHHHHCHTTTSBS--EEEEEE--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEET
T ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEEee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhc-CCCCcCCCcCCccc
Confidence 58999999999988889999999999987 5667999999998733 478999999999999932 23569999999999
Q ss_pred cccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeE
Q 026343 80 STPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 159 (240)
Q Consensus 80 ~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~ 159 (240)
.+||.|.|.++|.+||.++|+.++++.+.+.+.. ....+++.+++.+.+.....+|+|||||||.||++++.++.++
T Consensus 133 ~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~---~~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~ 209 (288)
T PF03881_consen 133 SLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGL---DAELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPV 209 (288)
T ss_dssp TEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EE
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc---hhHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCce
Confidence 9999999999999999999999999888877653 2334556666666666545789999999999999999987799
Q ss_pred EEccCCCCCchhhhhHhh-hhcCCCHHHHHHhhhcCCCCcCHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026343 160 ILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 236 (240)
Q Consensus 160 iiD~~~~~Gd~~~Dla~~-~~~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l~~~~~~g~~~~~~~~~~~~~~~~ 236 (240)
|||+++++||+|+|||++ .|++|+++|+++|.+..|++++|++|..+|+||+.|+|+.+||.+|++++++++++|++
T Consensus 210 l~DPa~yygh~E~DLam~~lfggf~~~f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~ 287 (288)
T PF03881_consen 210 LFDPACYYGHREVDLAMTRLFGGFPDEFYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS 287 (288)
T ss_dssp E-S---EEE-CHHHHHHHCCCSTTHHHHHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred eeccccccCchHhhhhhhhhhCCCCHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 999999999999999988 46889999999999999999999999999999999999999999999999999999986
No 3
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=100.00 E-value=2.1e-48 Score=300.99 Aligned_cols=239 Identities=50% Similarity=0.904 Sum_probs=219.1
Q ss_pred ChHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHh------------hcCC-C-
Q 026343 1 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGK-S- 66 (240)
Q Consensus 1 ~~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH------------~~~~-~- 66 (240)
||+.|++.|+++.++..|.||+++.....+.|..++|||+|+-..++..+..+|++||.|| .... .
T Consensus 50 mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~r 129 (313)
T KOG3021|consen 50 MFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGR 129 (313)
T ss_pred HHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhcccccc
Confidence 6899999999999998999999999988767899999999999888899999999999999 2111 0
Q ss_pred ---------CCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCC
Q 026343 67 ---------SKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVE 137 (240)
Q Consensus 67 ---------~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (240)
.+.|||...++||.+||.|.|+++|.+||.+.|+.++++.+++...|.+..+++..+...++.++.....-
T Consensus 130 gge~~e~~~v~~FGF~v~tccG~lpQvNdW~edW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~ 209 (313)
T KOG3021|consen 130 GGEEGEQIGVENFGFHVVTCCGRLPQVNDWQEDWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEIL 209 (313)
T ss_pred CcccccccchhccceeeeeecccCcccccchhhHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceee
Confidence 12389999999999999999999999999999999999999988888888899888888899999876788
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccCCCCCchhhhhHhhh-hcCCCHHHHHHhhhcCCCCcCHHHHHHHHHHHHHHHHH
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSW-CAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~Gd~~~Dla~~~-~~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l~~~ 216 (240)
|+|+|||||.|||-.|+.++++|+|+++++||+++|+++++ +++|++.|+++|....|-.+++++|+.+|+||+.|+||
T Consensus 210 PaLlHGDLW~GNva~D~~~ePiIfDPasfYgh~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHw 289 (313)
T KOG3021|consen 210 PALLHGDLWSGNVAEDGAGEPIIFDPASFYGHSEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHW 289 (313)
T ss_pred hhhhccccccCcccccCCCCceEeCchhhcCCcHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhh
Confidence 99999999999998888788999999999999999999985 58899999999999999999999999999999999999
Q ss_pred HhhCCCcHHHHHHHHHHHHHHhc
Q 026343 217 NLFGSGYRSSALSIIDDYLRMLK 239 (240)
Q Consensus 217 ~~~g~~~~~~~~~~~~~~~~~~~ 239 (240)
..||++|++.+.+++++++++++
T Consensus 290 NhFGs~YRs~sl~i~~n~lk~~~ 312 (313)
T KOG3021|consen 290 NHFGSGYRSSSLDIMRNLLKNCY 312 (313)
T ss_pred hhhccccccchhHHHHHHHHHhc
Confidence 99999999999999999999876
No 4
>PRK10593 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=262.87 Aligned_cols=226 Identities=20% Similarity=0.219 Sum_probs=177.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEeeccCCCCC----------chHHHHHHHHHHHhhcCCCCC
Q 026343 1 MFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR----------GNQSVFGKKLAEMHKAGKSSK 68 (240)
Q Consensus 1 ~~~~E~~~L~~l~~~~~v~vP~v~~~~~~~--~~~~~~vme~l~G~~~~----------~~~~~lg~~La~lH~~~~~~~ 68 (240)
++..|++.|++|++.+.+|||+|+..+... .+..++|||+|+|.++. ....++++.|++||+++.
T Consensus 53 ~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~--- 129 (297)
T PRK10593 53 VAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS--- 129 (297)
T ss_pred HHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh---
Confidence 578999999999987679999999876542 46799999999997642 123556799999999753
Q ss_pred CCCCCCCCccccccccCCCcccHHHHHHHhhhHHHH---HHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCC
Q 026343 69 GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 145 (240)
Q Consensus 69 ~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl 145 (240)
+|+ .|. ..+.|.+.|..|+. +++..+. +.+...+........+.++.+.+++.+.....+|+||||||
T Consensus 130 -~g~-----~g~--~~~~~~~~w~~f~~-~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDl 200 (297)
T PRK10593 130 -RGC-----VGA--VDSTQENLWPSWYQ-QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNF 200 (297)
T ss_pred -hhc-----ccC--CCCcccccHHHHHH-HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCC
Confidence 343 222 24457778888885 5666433 22222223333334445566667777765446799999999
Q ss_pred CCCCeeecCC-CC-eEEEccC-CCCCchhhhhHhhhhcCCCHHHHHHhhhcCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Q 026343 146 WSGNISSDKN-GE-PVILDPA-CYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSG 222 (240)
Q Consensus 146 ~~~Nvlv~~~-~~-~~iiD~~-~~~Gd~~~Dla~~~~~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l~~~~~~g~~ 222 (240)
|+|||+++++ +. ++||||+ ++|||+++|++++.+++|.++|+++|.+..|++++|++|..+|.||+.|+|+.+||.-
T Consensus 201 w~gNvl~~~~~~~i~~liDPa~~~~g~rE~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~ 280 (297)
T PRK10593 201 TLRSMLKDPRSDQLLAMLNPGLMLWAPREYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRF 280 (297)
T ss_pred CcccEEECCCCCceEEEECchHhCCCCHHHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999865 33 7899998 7999999999988667899999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHh
Q 026343 223 YRSSALSIIDDYLRML 238 (240)
Q Consensus 223 ~~~~~~~~~~~~~~~~ 238 (240)
+...+..++...+.||
T Consensus 281 ~~~~~~~~~~~~~~~~ 296 (297)
T PRK10593 281 DRRRFDLAAKSLLPWL 296 (297)
T ss_pred chhhHHHHHHHhcccc
Confidence 9999999999888876
No 5
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.89 E-value=2.2e-22 Score=163.90 Aligned_cols=185 Identities=15% Similarity=0.096 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCC--CceEEEEeeccCCCCC--------chHHHHHHHHHHHhhcCCCCC-CC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEFGSSR--------GNQSVFGKKLAEMHKAGKSSK-GF 70 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~--~~~~~vme~l~G~~~~--------~~~~~lg~~La~lH~~~~~~~-~~ 70 (240)
++.|+++|+.|++..+++||+++..+...+ +..|++|++++|.++. ....++|+.|++||+++.+.. ..
T Consensus 35 ~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~ 114 (235)
T cd05155 35 VRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPA 114 (235)
T ss_pred HHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCcc
Confidence 578999999999866899999999876532 3569999999998863 235789999999999876321 11
Q ss_pred CCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCe
Q 026343 71 GFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 150 (240)
Q Consensus 71 g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nv 150 (240)
+.. ... .......|.+.... .+.... ...+. ..+.++.+...+... ..+++|||||||++||
T Consensus 115 ~~~--~~~-----~~~~~~~~~~~~~~-----~~~~~~-~~l~~---~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nv 176 (235)
T cd05155 115 GRH--NFL-----RGGDLAVRDAETRE-----AIEALE-GVIDV---DAARALWEAALRAPW--WGPPVWFHGDLAPGNL 176 (235)
T ss_pred CCc--ccc-----CCCChhHhhHHHHH-----HHHHcc-cccCh---HHHHHHHHHHhcccc--cCCceEEeCCCCCCcE
Confidence 110 000 00001122211110 001000 00111 112222222222221 2678999999999999
Q ss_pred eecCCCCeEEEccC-CCCCchhhhhHhhhh--c-CCCHHHHHHhhhcCCCCcCHHHHHHHHH
Q 026343 151 SSDKNGEPVILDPA-CYYGHNEAEFGMSWC--A-GFGGSFYNSYFEVMPKQPGFEKRRDLYM 208 (240)
Q Consensus 151 lv~~~~~~~iiD~~-~~~Gd~~~Dla~~~~--~-~~~~~~~~~Y~~~~~~~~~~~~r~~~y~ 208 (240)
||++++.++||||+ +.+|||++|+|.++. . +..+.|++.|+ .. +.-.+|.++|.
T Consensus 177 lv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y~-~~---~~~~~~~~~~~ 234 (235)
T cd05155 177 LVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAALG-VD---DATWARGRGWA 234 (235)
T ss_pred EEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHcC-CC---HHHHHHhcccc
Confidence 99877767999985 789999999998753 1 22367899998 22 22467777764
No 6
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.88 E-value=3.1e-21 Score=157.90 Aligned_cols=181 Identities=14% Similarity=0.118 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC---------chHHHHHHHHHHHhhcCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR---------GNQSVFGKKLAEMHKAGKSSKGFGF 72 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~---------~~~~~lg~~La~lH~~~~~~~~~g~ 72 (240)
+.+|+++|++|++. ++||+|+..+.. .+..++||++++|.++. ....++|+.|++||+++.+. +.+
T Consensus 38 ~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~ 112 (244)
T cd05150 38 LEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVAD--CPF 112 (244)
T ss_pred hHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCc
Confidence 46899999999985 999999998865 46789999999998764 23578999999999986421 111
Q ss_pred CCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-----CChHH-HHHHHHHHHHHhhhhcCCCCCcceeccCCC
Q 026343 73 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-----GDSTI-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 146 (240)
Q Consensus 73 ~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-----~~~~~-~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~ 146 (240)
. + .+.+. +........... .+... ....+++.+.+.+.... ..+|+|||||+|
T Consensus 113 ~-----~----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~ 171 (244)
T cd05150 113 D-----R----------RLDRR-----LAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA-EEDLVVTHGDAC 171 (244)
T ss_pred c-----h----------hHHHH-----HHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC-cCceEEECCCCC
Confidence 0 0 00000 100000010000 01100 01123344444333322 367899999999
Q ss_pred CCCeeecCCCCeEEEccC-CCCCchhhhhHhhh-h----c---CCCHHHHHHhhhcCCCCcCHHHHHHHHHHHHH
Q 026343 147 SGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW-C----A---GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHY 212 (240)
Q Consensus 147 ~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~-~----~---~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~ 212 (240)
++|||+++++.++||||. +.+|||.+|++.+. . . +..+.|+++|.+.. . + .+|+.+|+++..
T Consensus 172 ~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~f~~~Y~~~~-~--~-~~~~~~~~~~~~ 242 (244)
T cd05150 172 LPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAARFLDRYGIDA-P--D-PEKLAYYRLLDE 242 (244)
T ss_pred CccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHHHHHHcCCCC-C--C-HHHHHHHHHHhh
Confidence 999999987778999984 67999999999763 1 1 23468999997631 2 2 689999988754
No 7
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.86 E-value=2.7e-20 Score=153.53 Aligned_cols=182 Identities=15% Similarity=0.109 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDV 74 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~ 74 (240)
.+.|.++|+.+++. ++ +|+++.... .++|||||+|.+++ ....++++.|++||+.+.+. .+.
T Consensus 38 r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~----~~~ 106 (256)
T TIGR02721 38 RQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFG----YPL 106 (256)
T ss_pred HHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCC----CCC
Confidence 36899999999986 45 899998864 37999999998764 24689999999999986521 000
Q ss_pred CCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecC
Q 026343 75 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK 154 (240)
Q Consensus 75 ~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~ 154 (240)
+. . .++..++....+....+ .+.++.+.+.......+.++++||||++++|||+++
T Consensus 107 ---------------~~---~--~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~ 162 (256)
T TIGR02721 107 ---------------SL---K--ARIAHYWLQIDPARRTP----EWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTP 162 (256)
T ss_pred ---------------CH---H--HHHHHHHHhcccccCCh----HHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeC
Confidence 00 0 01222222211111122 223333333222111135789999999999999987
Q ss_pred CCCeEEEccC-CCCCchhhhhHhhhhc---CCCHHHHHHhhhcCCCC--cCHHHHHHHHHHHHHHHHHHhh
Q 026343 155 NGEPVILDPA-CYYGHNEAEFGMSWCA---GFGGSFYNSYFEVMPKQ--PGFEKRRDLYMLYHYLNHYNLF 219 (240)
Q Consensus 155 ~~~~~iiD~~-~~~Gd~~~Dla~~~~~---~~~~~~~~~Y~~~~~~~--~~~~~r~~~y~l~~~l~~~~~~ 219 (240)
++ .+||||+ +.+|||.+|||.+... ...+.|++.|.+..+.. +.+.+++..|..+..+.+..++
T Consensus 163 ~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 232 (256)
T TIGR02721 163 QG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQRRRIYSISVLWRQVKAWQPWVDYMAALWF 232 (256)
T ss_pred CC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 7899985 7899999999987432 22368999999875432 3566677666655444444444
No 8
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.86 E-value=2.6e-20 Score=156.67 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEeeccCCCCC----chHHHHHHHHHHHhhcCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGF 72 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~~~~~vme~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~ 72 (240)
+..|.++++.|++. +++||+++...... ++..++||+|++|.+++ ....++|+.|++||..... |..
T Consensus 53 ~~~e~~~l~~L~~~-g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~ 128 (296)
T cd05153 53 LPFFLALLDHLAER-GLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPG 128 (296)
T ss_pred ccHHHHHHHHHHHC-CCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCc
Confidence 35799999999986 79999999865321 46789999999998764 3468999999999998642 221
Q ss_pred CCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeee
Q 026343 73 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISS 152 (240)
Q Consensus 73 ~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv 152 (240)
.. +. .....|...... +... .........+++.+..+.+.... ..+.++||||+|++|||+
T Consensus 129 ~~-------~~--~~~~~~~~~~~~-~~~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~ 189 (296)
T cd05153 129 ER-------NN--LRGLAWIRELGK-DLLP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLF 189 (296)
T ss_pred cC-------CC--cCCcHHHHHHHH-Hhcc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEE
Confidence 10 00 001233322111 0100 01223344445555554433222 356799999999999999
Q ss_pred cCCCCeEEEcc-CCCCCchhhhhHhhh---hc----CC----CHHHHHHhhhcCCCCcCHHHHHHHHHHH
Q 026343 153 DKNGEPVILDP-ACYYGHNEAEFGMSW---CA----GF----GGSFYNSYFEVMPKQPGFEKRRDLYMLY 210 (240)
Q Consensus 153 ~~~~~~~iiD~-~~~~Gd~~~Dla~~~---~~----~~----~~~~~~~Y~~~~~~~~~~~~r~~~y~l~ 210 (240)
++++.++|||| .+.+|++++|+|.+. +. ++ .+.|+++|.+.++++++..+.+..+...
T Consensus 190 ~~~~~~~iIDfe~a~~g~~~~Dla~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~~~ 259 (296)
T cd05153 190 DGDELSGVIDFYFACTDAFLYDLAITLNDWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIMLRG 259 (296)
T ss_pred eCCceEEEeehhhhcCchHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 98776799998 578999999999652 21 12 2689999999999987666666665543
No 9
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.86 E-value=1e-20 Score=152.96 Aligned_cols=156 Identities=15% Similarity=0.174 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC-----CC-------chHHHHHHHHHHHhhcCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-----SR-------GNQSVFGKKLAEMHKAGKSSKG 69 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~-----~~-------~~~~~lg~~La~lH~~~~~~~~ 69 (240)
.++|+++|+.+++. ++|||+|+..+.. ++...+|||||+|.+ +. .....+|+.+++||+++.+.
T Consensus 39 i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~-- 114 (226)
T TIGR02172 39 IKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT-- 114 (226)
T ss_pred HHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--
Confidence 36899999999976 7999999999865 455678999999974 11 23577888999999976531
Q ss_pred CCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCCh-HHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCC
Q 026343 70 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS-TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSG 148 (240)
Q Consensus 70 ~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~ 148 (240)
.+ .+ ..+ .++...++ +....+ ...+.+.++ +. ..+.++++||||+|++
T Consensus 115 ~~---------l~------~~~------~~~~~~l~---~~~~~~~~~~~~l~~~---l~----~~~~~~~~~HgD~~~~ 163 (226)
T TIGR02172 115 ST---------FQ------SYK------EKIRKFIE---EKDFVPKDYKEKARAF---IK----EVPDTSTCLHGDFQIG 163 (226)
T ss_pred Cc---------HH------HHH------HHHHHHHH---hccCCCHHHHHHHHHH---HH----hCCCCCceEecCCCCC
Confidence 11 00 000 01222221 111111 222222222 22 2245678999999999
Q ss_pred CeeecCCCCeEEEccC-CCCCchhhhhHhhhh-cCC----CHHHHHHhhhc
Q 026343 149 NISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGF----GGSFYNSYFEV 193 (240)
Q Consensus 149 Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~~-~~~----~~~~~~~Y~~~ 193 (240)
|||+++++ .+||||+ +.+|||.+||+.++. ..+ ...|+..|..+
T Consensus 164 Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~~~~y~~~ 213 (226)
T TIGR02172 164 NLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQAIFHMNAE 213 (226)
T ss_pred cEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHHHHhcCHH
Confidence 99998877 9999985 789999999998742 333 34567777753
No 10
>PRK05231 homoserine kinase; Provisional
Probab=99.86 E-value=5.8e-20 Score=156.14 Aligned_cols=186 Identities=17% Similarity=0.178 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEeeccCCCCC----chHHHHHHHHHHHhhcCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFD 73 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~~~~~vme~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~ 73 (240)
..|.++++.|++. ++|||+|+...... .+..+++|+|++|.... ..++++|+.||+||..... |...
T Consensus 62 ~~~~~~l~~L~~~-glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~ 137 (319)
T PRK05231 62 PFFLGLMQHLAAR-GVPVPAPVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLE 137 (319)
T ss_pred HHHHHHHHHHHHC-CCCCCcceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCcc
Confidence 4578899999986 79999999764321 46789999999998653 3478899999999997642 3322
Q ss_pred CCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeec
Q 026343 74 VDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD 153 (240)
Q Consensus 74 ~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~ 153 (240)
..+.. .+ ..|.+.+.. +.+.+.... ...+.+.+..+.+.+.+...+ ..+.++||||+|++|||++
T Consensus 138 ~~~~~-------~~-~~~~~~~~~--~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~-~lp~~liHgD~~~~Nil~~ 202 (319)
T PRK05231 138 RPNLR-------GL-AWWRELAPR--LLPFLADEQ----AALLEAELAAQLAFLASAAWP-ALPRGVIHADLFRDNVLFE 202 (319)
T ss_pred CCCCC-------Ch-HHHHHHHHH--HhhccChhH----HHHHHHHHHHHHHhhhccccc-cCCcccCCCCCCCCcEEEE
Confidence 11110 00 122222211 111110000 011122223333332211111 2466999999999999998
Q ss_pred CCCCeEEEcc-CCCCCchhhhhHhh---hhc----CC----CHHHHHHhhhcCCCCcCHHHHHHHH
Q 026343 154 KNGEPVILDP-ACYYGHNEAEFGMS---WCA----GF----GGSFYNSYFEVMPKQPGFEKRRDLY 207 (240)
Q Consensus 154 ~~~~~~iiD~-~~~~Gd~~~Dla~~---~~~----~~----~~~~~~~Y~~~~~~~~~~~~r~~~y 207 (240)
+++.++|||| .+.+|++.+|+|.+ ++. .+ ..+|++||.+.++++++..+.+..+
T Consensus 203 ~~~~~~iIDf~~~~~~~~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~~ 268 (319)
T PRK05231 203 GDRLSGFIDFYFACNDKLLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPVM 268 (319)
T ss_pred CCceEEEEecccccCCchHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 7766799998 57899999999975 331 12 2689999999999987654444443
No 11
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.85 E-value=7.1e-20 Score=152.29 Aligned_cols=183 Identities=14% Similarity=0.122 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC--------------------chHHHHHHHHHHHh
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR--------------------GNQSVFGKKLAEMH 61 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~--------------------~~~~~lg~~La~lH 61 (240)
+++|+++|++|++..++|||+++..+. .+++|++++|.+.. ..+.++|+.|++||
T Consensus 52 l~rE~~vL~~L~~~l~vpvP~~~~~~~-----~~~~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH 126 (276)
T cd05152 52 AAAEKRVLALVRKHLPVQVPDWRVHTP-----ELIAYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELH 126 (276)
T ss_pred HHHHHHHHHHHHhcCCCCCCceeeecC-----ceEEEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHh
Confidence 478999999999877899999875442 37888899987641 13578999999999
Q ss_pred hcCCCC-CCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-CChHHHHHHHHHHHHHhhhhcCCCCCcc
Q 026343 62 KAGKSS-KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPC 139 (240)
Q Consensus 62 ~~~~~~-~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p~ 139 (240)
+++.+. ...|.... ....... .+...++...... ....+.+.+.++ +++.- ..+.+++
T Consensus 127 ~i~~~~~~~~g~~~~-----------~~~~~~~-----~~~~~l~~~~~~~~~~~~l~~~~~~~---L~~~~-~~~~~~~ 186 (276)
T cd05152 127 SIPQDEAEAAGIPVE-----------TPEEVRQ-----TMADRMDRVKEEFGVSEALWNRWQAW---LDDDS-YWPRHTV 186 (276)
T ss_pred CCChhhccccCCCCC-----------CHHHHHH-----HHHHHHHHHHHhcCCCHHHHHHHHHH---HhhcC-CCCCCCe
Confidence 987532 11121100 0011001 1222222222211 222222222222 22111 1146789
Q ss_pred eeccCCCCCCeeecCC-CCeEEEcc-CCCCCchhhhhHhhh-hc--CCCHHHHHHhhhcCCCCcCHHHHHHHHHHH
Q 026343 140 LLHGDLWSGNISSDKN-GEPVILDP-ACYYGHNEAEFGMSW-CA--GFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 210 (240)
Q Consensus 140 lvHgDl~~~Nvlv~~~-~~~~iiD~-~~~~Gd~~~Dla~~~-~~--~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~ 210 (240)
|||||+|++|||++++ +.++|||| ++.+|||++||+.++ +. .+.++|+++|.+..+.... ..+..+++++
T Consensus 187 lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~Dla~~~~~~~~~~~~~~~~~Y~~~~g~~~~-~~~~~~~~~~ 261 (276)
T cd05152 187 LVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARDFVLHYRIFGEAGLERLIDAYEAAGGRVWP-RMKEHIIELL 261 (276)
T ss_pred eEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCc-hHHHHHHHHH
Confidence 9999999999999873 45789998 578999999999763 32 2458999999986543211 3344444444
No 12
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.85 E-value=9.5e-20 Score=154.08 Aligned_cols=185 Identities=15% Similarity=0.178 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEeeccCCCCC----chHHHHHHHHHHHhhcCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFD 73 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~~~~~vme~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~ 73 (240)
..|.++++.|++. ++|||+++...... .+..+++|+|++|.+.. ....++|+.||+||.... +|...
T Consensus 63 ~~e~~~l~~L~~~-g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~---~~~~~ 138 (307)
T TIGR00938 63 PFFLALTTHLAAR-GLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGA---HFPEN 138 (307)
T ss_pred HHHHHHHHHHHHC-CCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhc---cCCCC
Confidence 4688899999886 79999999865431 36789999999998753 346899999999999764 23221
Q ss_pred CCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeec
Q 026343 74 VDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD 153 (240)
Q Consensus 74 ~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~ 153 (240)
.. ...+...|...+...+ ..+. .........+.+..+.+...+.. ..++++||||+|++||+++
T Consensus 139 ~~--------~~~~~~~w~~~~~~~~--~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~ 202 (307)
T TIGR00938 139 RK--------NSLRLEAWHILAEKCF--EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFD 202 (307)
T ss_pred CC--------CCCChHHHHHHHHhhh--hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEE
Confidence 11 0012245554433210 0000 01111222233334433332222 3567999999999999998
Q ss_pred CCCCeEEEcc-CCCCCchhhhhHhh---hh----cCCC----HHHHHHhhhcCCCCcCHHHHHHHH
Q 026343 154 KNGEPVILDP-ACYYGHNEAEFGMS---WC----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 207 (240)
Q Consensus 154 ~~~~~~iiD~-~~~~Gd~~~Dla~~---~~----~~~~----~~~~~~Y~~~~~~~~~~~~r~~~y 207 (240)
+++..+|||| .+.+|++.+|||.+ ++ ..+. ..|++||.+.+++++...+.+...
T Consensus 203 ~~~~~~vIDfd~~~~~~~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~ 268 (307)
T TIGR00938 203 GDSVKGVIDFYFACTDARAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL 268 (307)
T ss_pred CCceEEEeecccccCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 8776799998 47899999999975 22 1243 789999999999987655555544
No 13
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.85 E-value=5.1e-20 Score=154.11 Aligned_cols=175 Identities=19% Similarity=0.255 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCC-CceEEEEeeccCCCCC----------chHH-HHHHHHHHHhhcCCCC-CC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPT-GGSYIIMEFIEFGSSR----------GNQS-VFGKKLAEMHKAGKSS-KG 69 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~-~~~~~vme~l~G~~~~----------~~~~-~lg~~La~lH~~~~~~-~~ 69 (240)
.+|+++|+.+.+. .+|||+++....... |.+|+||+|++|+... .... ++++.|+.||+++... ..
T Consensus 69 ~re~~~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~ 147 (321)
T COG3173 69 KREYRVIAALLDV-DVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPD 147 (321)
T ss_pred HhHHHHHHHhcCC-CCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 4688888888876 789999988876644 7899999999995421 2345 8999999999998421 11
Q ss_pred CCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHH-HhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCC
Q 026343 70 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL-DQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSG 148 (240)
Q Consensus 70 ~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~ 148 (240)
+|.+.....+ +.. .|..-+ ..+. +........+.+..+++. .-.....++|+||||+|+|
T Consensus 148 ~g~~~~~~~r---ql~----~~~~~~---------~~~~~~~~~~~p~~~~~~~Wl~~---~~p~~~~~~~lvHGD~~~g 208 (321)
T COG3173 148 PGKPNAYRGR---QLA----RWDDEY---------RRAKKELGGRIPLADRLIKWLEA---NRPPWAGPPVLVHGDYRPG 208 (321)
T ss_pred CCccCccccc---hhh----HHHHHH---------HHHHHhccCCCchHHHHHHHHHh---cCCCcCCCceeeeCCcccC
Confidence 2211111111 111 221111 1111 111222222222333322 2221247889999999999
Q ss_pred CeeecCCCCeEEEccC-CCCCchhhhhHhh-hh--c------CCC------HHHHHHhhhcCCCC
Q 026343 149 NISSDKNGEPVILDPA-CYYGHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ 197 (240)
Q Consensus 149 Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~-~~--~------~~~------~~~~~~Y~~~~~~~ 197 (240)
|+|+++++.++||||+ +.+|||..||+.+ |. . .+. ..+++.|.+.+.++
T Consensus 209 Nlii~~~~~~gVlDwe~~~lGDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~ 273 (321)
T COG3173 209 NLIIDPGRPTGVLDWELATLGDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA 273 (321)
T ss_pred CEEEeCCCeeEEEeccccccCCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence 9999998889999985 6899999999987 63 1 111 46788899887765
No 14
>PLN02876 acyl-CoA dehydrogenase
Probab=99.83 E-value=2e-19 Score=169.89 Aligned_cols=200 Identities=19% Similarity=0.221 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEeeccCCCCC-------------chHHHHHHHHHHHhhcCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKS 66 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~--~~~~~~vme~l~G~~~~-------------~~~~~lg~~La~lH~~~~~ 66 (240)
+.+|+++|+.|++..++|||+|+..+... .+.+|+||||++|..+. ..+.++++.|++||++..+
T Consensus 85 ~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~ 164 (822)
T PLN02876 85 VEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD 164 (822)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence 57999999999875689999999987542 36899999999998532 1357799999999998753
Q ss_pred CCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcC--ChHHHHHHHHHHHHHhhhhcCCC---CCccee
Q 026343 67 SKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG--DSTIYQRGHRLMKNLAPLFEGVN---VEPCLL 141 (240)
Q Consensus 67 ~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~---~~p~lv 141 (240)
. .|+... |. . ..|.. ..+..+.+....... .......++++.+.+.+..+... .+++||
T Consensus 165 ~--~gl~~~---g~---~----~~~~~----~~l~~w~~~~~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~Lv 228 (822)
T PLN02876 165 A--IGLGKY---GR---R----DNYCK----RQVERWAKQYLASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIV 228 (822)
T ss_pred h--cChhhc---CC---C----CchHH----HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceE
Confidence 2 222110 10 0 01100 011111111111000 00011223344444433333211 158999
Q ss_pred ccCCCCCCeeecCC--CCeEEEcc-CCCCCchhhhhHhh---hh-c-------------------CCC--HHHHHHhhhc
Q 026343 142 HGDLWSGNISSDKN--GEPVILDP-ACYYGHNEAEFGMS---WC-A-------------------GFG--GSFYNSYFEV 193 (240)
Q Consensus 142 HgDl~~~Nvlv~~~--~~~~iiD~-~~~~Gd~~~Dla~~---~~-~-------------------~~~--~~~~~~Y~~~ 193 (240)
||||+++|||++++ ++++|||| .+.+|||.+||+++ ++ . |++ +++++.|.+.
T Consensus 229 HGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~ 308 (822)
T PLN02876 229 HGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSA 308 (822)
T ss_pred ecCcccccEEEcCCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHH
Confidence 99999999999853 34789998 57899999999965 21 1 222 5799999998
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHHh
Q 026343 194 MPKQPGFEKRRDLYMLYHYLNHYNL 218 (240)
Q Consensus 194 ~~~~~~~~~r~~~y~l~~~l~~~~~ 218 (240)
.+.+.+ ...+.+|+.+..+.++..
T Consensus 309 ~g~~~~-~~~~~~~~~~~~~r~a~I 332 (822)
T PLN02876 309 SGKPWP-AANWKFYVAFSLFRGASI 332 (822)
T ss_pred hCCCCC-CcccHHHHHHHHHHHHHH
Confidence 654311 234577877766655443
No 15
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=5.9e-19 Score=150.27 Aligned_cols=193 Identities=16% Similarity=0.122 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccC----CCceEEEEeeccCCCCC----chHHHHHHHHHHHhhcCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDV 74 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~----~~~~~~vme~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~ 74 (240)
..|.+++..|++. ++|||.++..+... ++..+.|++|++|.+.. ...+++|+.|++||..+.. +++..
T Consensus 68 ~~E~~~l~~L~~~-gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~ 143 (325)
T PRK11768 68 LEEHAFALELAEA-EIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEH 143 (325)
T ss_pred HHHHHHHHHHHHC-CCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCC
Confidence 5799999999986 68988875322111 36788999999998753 3468999999999998753 11110
Q ss_pred CCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHH----HHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCe
Q 026343 75 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI----YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 150 (240)
Q Consensus 75 ~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nv 150 (240)
...| ++..+... ....+. .....++.+ .+.++++.+.+.+.+.....+.++||||+|++||
T Consensus 144 ---------r~~~--~~~~~~~~--~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~Nv 208 (325)
T PRK11768 144 ---------RPTL--DLQEYGIE--PRDWLL--ASDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNI 208 (325)
T ss_pred ---------CCcC--CHHHHHHH--HHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhc
Confidence 0111 11111100 001110 011122222 2344444444444443212567899999999999
Q ss_pred eecCCCCeEEEcc-CCCCCchhhhhHhhhhcC------CCHHHHHHhhhcCCCCcCHHHHHHHHHHHHHHHHH
Q 026343 151 SSDKNGEPVILDP-ACYYGHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 216 (240)
Q Consensus 151 lv~~~~~~~iiD~-~~~~Gd~~~Dla~~~~~~------~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l~~~ 216 (240)
+++ + ..+|||| ++.+|++++||+++.... .-.+|++||.+.+++++...+.+..++.++.+..+
T Consensus 209 L~~-d-~~~iIDFDd~~~g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~~~~ 279 (325)
T PRK11768 209 LWR-D-GPHFVDLDDARMGPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLIHYS 279 (325)
T ss_pred ccc-C-CcEEEeCCCCCCCCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 995 4 4889998 578999999999864221 12579999999999988777777777666555443
No 16
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.81 E-value=3.6e-18 Score=144.59 Aligned_cols=199 Identities=18% Similarity=0.176 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEeeccCCCCC----chHHHHHHHHHHHhhcCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFD 73 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~~~~~vme~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~ 73 (240)
..|.++++.|++. +++||+|+...... ++..|.|++|++|.+.. ....++|+.||+||..... |...
T Consensus 35 ~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~ 110 (313)
T TIGR02906 35 LFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNNPIDLKKAAKGLALFHHASKG---YVPP 110 (313)
T ss_pred HHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCCHHHHHHHHHHHHHHHHhCCC---CCCC
Confidence 4578899999987 68999999875431 45789999999998764 3478999999999998752 2111
Q ss_pred CCCccccccccCCCcccHHHHHHHh--hhHHHHHHHHHhc-CC---hHHH-------HHHHHHHHHHh-----hhhcCCC
Q 026343 74 VDNTIGSTPQINKWTSNWIEFYAEH--RLGYQLKLALDQY-GD---STIY-------QRGHRLMKNLA-----PLFEGVN 135 (240)
Q Consensus 74 ~~~~~g~~~~~~~~~~~w~~~~~~~--~l~~~l~~~~~~~-~~---~~~~-------~~~~~~~~~~~-----~~l~~~~ 135 (240)
. +..+.. . ...|.+.+... .+....+.+.... .+ .... ....+.++.+. ++.....
T Consensus 111 ~----~~~~~~-~-~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 184 (313)
T TIGR02906 111 D----GSKIRS-K-LGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEVDYFLERGKKALELLNKSKYYDLCKEAK 184 (313)
T ss_pred C----cchhhc-c-ccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHhhc
Confidence 0 001110 0 12344333221 1222222221111 11 1011 11112221111 1111112
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhhh---h---cCCC----HHHHHHhhhcCCCCcCHHHHH
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW---C---AGFG----GSFYNSYFEVMPKQPGFEKRR 204 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~---~---~~~~----~~~~~~Y~~~~~~~~~~~~r~ 204 (240)
.++++||||+|++||++++ +.++||||+ +.+|++++|+|.+. + ..+. ..|++||.+..++++...+.+
T Consensus 185 ~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~~d~~~~~~~l~gY~~~~~L~~~e~~~l 263 (313)
T TIGR02906 185 KIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGVWDLEKAKEIIEAYSSINPLSKEEKEVL 263 (313)
T ss_pred CcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 4679999999999999987 458999985 78999999999652 2 2344 589999999999987766666
Q ss_pred HHHHHHHH
Q 026343 205 DLYMLYHY 212 (240)
Q Consensus 205 ~~y~l~~~ 212 (240)
..+.++..
T Consensus 264 ~~~l~~p~ 271 (313)
T TIGR02906 264 YIDLAFPH 271 (313)
T ss_pred HHHHhChH
Confidence 66655543
No 17
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.80 E-value=2.7e-18 Score=145.16 Aligned_cols=187 Identities=20% Similarity=0.219 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC-----CC--ceEEEEeeccCCCCC-----chHHHHHHHHHHHhhcCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKG 69 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~--~~~~vme~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~ 69 (240)
...|.++|+.|++. +++||.|+..-... .+ ..+.|.+|++|.++. ...+.+|+.|++||.....
T Consensus 65 i~~el~~l~~La~~-~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~--- 140 (331)
T COG2334 65 IPFELALLQHLAER-GIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG--- 140 (331)
T ss_pred HHHHHHHHHHHHHc-CCCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---
Confidence 35789999999997 68888775443321 46 889999999998765 2468999999999997642
Q ss_pred CCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHH----HHHHHHhhhhcCCCCCcceeccCC
Q 026343 70 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH----RLMKNLAPLFEGVNVEPCLLHGDL 145 (240)
Q Consensus 70 ~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~p~lvHgDl 145 (240)
|.+..++..+ . ..|.. . ..+.. .......+..++..+. .+.+.++..++. ...-+||||+
T Consensus 141 f~~~~p~~~~----~----~~w~~-~-~~~~~----~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~ 204 (331)
T COG2334 141 FPFERPNALR----R----LEWDI-L-EPRAL----LRLDLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDL 204 (331)
T ss_pred CCccCCCccc----c----cchhh-h-cchhh----hhhcccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCC
Confidence 4433332221 1 12321 0 00000 0000001222333333 333334433332 1233899999
Q ss_pred CCCCeeecCCC-CeEEEcc-CCCCCchhhhhHhhh---hc--CC----CHHHHHHhhhcCCCCcCHHHHHHHHH
Q 026343 146 WSGNISSDKNG-EPVILDP-ACYYGHNEAEFGMSW---CA--GF----GGSFYNSYFEVMPKQPGFEKRRDLYM 208 (240)
Q Consensus 146 ~~~Nvlv~~~~-~~~iiD~-~~~~Gd~~~Dla~~~---~~--~~----~~~~~~~Y~~~~~~~~~~~~r~~~y~ 208 (240)
+++||++++++ ..++||| +|.+|+..+|+|++. .. +. ..+|++||++.+++++...+-++.+.
T Consensus 205 ~~~NVl~d~~~~~~g~iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~~Lp~l~ 278 (331)
T COG2334 205 HPDNVLFDDDTDVSGFIDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELELLPDLR 278 (331)
T ss_pred CccceeEcCCCCeeeEEEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999887 4899998 688999999999863 22 12 26899999999999876555555443
No 18
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.77 E-value=1.9e-17 Score=132.91 Aligned_cols=156 Identities=21% Similarity=0.260 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCC--CceEEEEeeccCCCCCc--------------hHHHHHHHHHHHhhcCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEFGSSRG--------------NQSVFGKKLAEMHKAGK 65 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~--~~~~~vme~l~G~~~~~--------------~~~~lg~~La~lH~~~~ 65 (240)
++.|+++++.+++. +++||+++.+..... +..++||||++|.++.. .+.++++.|++||+.+.
T Consensus 42 ~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ 120 (223)
T cd05154 42 VAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDP 120 (223)
T ss_pred HHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence 57899999999986 799999999876532 46799999999986531 14789999999999875
Q ss_pred CCCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCC
Q 026343 66 SSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 145 (240)
Q Consensus 66 ~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl 145 (240)
+. .+.... + . ...+ . ...+..+.......... ....++++.+.+.+.+.. ..++++||||+
T Consensus 121 ~~--~~~~~~---~---~----~~~~---~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~l~HgD~ 181 (223)
T cd05154 121 AA--VGLGDL---G---R----PGGY---L-ERQVARWRRQYDASRTD--EPPAMERLLRWLEAHLPA-DSRPGLVHGDY 181 (223)
T ss_pred hh--cCCccc---C---C----CCch---H-HHHHHHHHHHHHhhccc--ccHHHHHHHHHHHhhCCC-CCCcEEEECCC
Confidence 32 221100 0 0 0010 0 01122222222111110 012233444444444433 35789999999
Q ss_pred CCCCeeecC--CCCeEEEcc-CCCCCchhhhhHhh
Q 026343 146 WSGNISSDK--NGEPVILDP-ACYYGHNEAEFGMS 177 (240)
Q Consensus 146 ~~~Nvlv~~--~~~~~iiD~-~~~~Gd~~~Dla~~ 177 (240)
|++|||+++ ++.++|||| .+.+|+|++|++.+
T Consensus 182 ~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~ 216 (223)
T cd05154 182 RLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL 216 (223)
T ss_pred CcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence 999999988 455789998 47899999999975
No 19
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.77 E-value=8.3e-18 Score=135.84 Aligned_cols=186 Identities=23% Similarity=0.307 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEeeccCCCCCc---------hHHHHHHHHHHHhhcCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSRG---------NQSVFGKKLAEMHKAGKSSKGF 70 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~--~~~~~~vme~l~G~~~~~---------~~~~lg~~La~lH~~~~~~~~~ 70 (240)
+..|+++++.|++. ++|||+++..+... .+..+++|++++|.++.. ...++|+.|++||+.+.+...+
T Consensus 37 ~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~ 115 (239)
T PF01636_consen 37 LRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPF 115 (239)
T ss_dssp HHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCH
T ss_pred HHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccccc
Confidence 46899999999987 57999999865432 345799999999986532 3578999999999986321100
Q ss_pred CCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHH-HHHHHhhhhcCCCCCcceeccCCCCCC
Q 026343 71 GFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR-LMKNLAPLFEGVNVEPCLLHGDLWSGN 149 (240)
Q Consensus 71 g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~p~lvHgDl~~~N 149 (240)
. . ...+....... +.......... ........+.+ +.+.+.+.+.. ..++++||||++++|
T Consensus 116 ~--------------~-~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~N 177 (239)
T PF01636_consen 116 A--------------D-WPEWRLEFLRQ-LESWTARLRAS-ELFDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGN 177 (239)
T ss_dssp T--------------H-HHHHHHHHHHH-HHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGG
T ss_pred c--------------c-ccccccccccc-cccccccccch-hhhhhhHHHHHHHHHHHHhhhcc-CCCcEEEEecccccc
Confidence 0 0 00110001000 11100000111 11111222222 55555555443 368899999999999
Q ss_pred eeec-CCCCeEEEccC-CCCCchhhhhHhhh-h--cCCCHHHHHHhhhcCCCCcCHHHHHHHH
Q 026343 150 ISSD-KNGEPVILDPA-CYYGHNEAEFGMSW-C--AGFGGSFYNSYFEVMPKQPGFEKRRDLY 207 (240)
Q Consensus 150 vlv~-~~~~~~iiD~~-~~~Gd~~~Dla~~~-~--~~~~~~~~~~Y~~~~~~~~~~~~r~~~y 207 (240)
||++ +++..+||||+ +.+|+|.+|++.+. . ......+.+.|.+......+ .++++.|
T Consensus 178 il~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 239 (239)
T PF01636_consen 178 ILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGEDQDPEFRRAYLEAYGRAAG-YARLRPY 239 (239)
T ss_dssp EEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTTHCHHHHHHHHHHHHTSSCH-HHHHHHH
T ss_pred ceeeeccceeEEEecccceECCHHHHHHHHHHHhcccCCHHHHHHHHHHhcCCCC-HHHhCCC
Confidence 9998 33434899985 67999999999763 2 22334455555444332233 4555544
No 20
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.72 E-value=2.2e-16 Score=128.44 Aligned_cols=152 Identities=18% Similarity=0.239 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
+.|+.+++.+++. ++ +|+|+.... ..++|||++|.+++ ....++|+.|++||+...+.. ....
T Consensus 43 ~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~---~~~~ 112 (235)
T cd05157 43 ERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFIPGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEA---ISSP 112 (235)
T ss_pred HHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEeeCCCcCCHHHccChHHHHHHHHHHHHHhccccccc---cccc
Confidence 5799999999986 55 899987543 25899999998764 235789999999999875321 0000
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcC---------ChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCC
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG---------DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 146 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~ 146 (240)
. .+... .|. ++..+......... .......+.+....+.+.+.....++++||||++
T Consensus 113 ~----~~~~~----~~~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~ 178 (235)
T cd05157 113 G----TPKPI----LWP------TIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLKELLSALNSPIVFCHNDLL 178 (235)
T ss_pred C----CCCCc----HHH------HHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCC
Confidence 0 00000 110 11111111111000 0111222333333344444332356799999999
Q ss_pred CCCeeecC-CCCeEEEccC-CCCCchhhhhHhhh
Q 026343 147 SGNISSDK-NGEPVILDPA-CYYGHNEAEFGMSW 178 (240)
Q Consensus 147 ~~Nvlv~~-~~~~~iiD~~-~~~Gd~~~Dla~~~ 178 (240)
++|||+++ ++...+|||+ +.+|||.+|||.+.
T Consensus 179 ~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~ 212 (235)
T cd05157 179 SGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHF 212 (235)
T ss_pred cCcEEEeCCCCCEEEEEcccCCcCchheeHHHHH
Confidence 99999987 4668999985 88999999999763
No 21
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.71 E-value=3e-16 Score=135.77 Aligned_cols=162 Identities=18% Similarity=0.199 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC-----------CchHHHHHHHHHHHhhcCCCC---
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSS--- 67 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~--- 67 (240)
...|+++|+.+++..+..||+||.++ ++..++|||++++... ...++++|+.|+++|..+...
T Consensus 77 ~~~Eae~L~~l~~~~p~~VPkV~~~D---~~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~ 153 (401)
T PRK09550 77 ARIEAEALKIQAKYVPDLVPKVYHYD---EELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLS 153 (401)
T ss_pred HHHHHHHHHHHHhhCCCCCCeEEEEC---CCCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcC
Confidence 46799999999988788999999998 4578999999998541 134789999999999755320
Q ss_pred -C-------CCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHh-cCChHHHHHHHHHHHHHhhhhcCCCCCc
Q 026343 68 -K-------GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP 138 (240)
Q Consensus 68 -~-------~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~p 138 (240)
. .|. .+..+...... -.+..+.... .+++.+.+....+. ..+.++...+.++.. .+. ..+.
T Consensus 154 ~~~~~~~~~~f~--N~~l~~ite~l-vft~P~~~~~-~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~----~~~--~~~~ 223 (401)
T PRK09550 154 SEEKKALVAKFT--NPELCKITEDL-VFTDPYFDHE-TNNFEPELEPEVEELRADKELKLEVAKLKH----KFL--TKAE 223 (401)
T ss_pred hhhhhhHHhhcC--CHHHhhhhHhh-ccccchhhhh-hccCChhhHHHHHHHHhCHHHHHHHHHHHH----HHh--cCCC
Confidence 0 011 11111100000 0000000000 01122222221111 113333333333322 222 2467
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
+|+|||||+||||+.+++ +.||||. +++|+|.+|++.+
T Consensus 224 ~l~HgDl~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~ 262 (401)
T PRK09550 224 ALLHGDLHTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTF 262 (401)
T ss_pred ceeeccCCcccEEeeCCC-cEEEeccccccCChHHHHHHH
Confidence 899999999999997764 8999985 8899999999975
No 22
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.71 E-value=9.8e-17 Score=138.28 Aligned_cols=163 Identities=15% Similarity=0.111 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC--CCC----------chHHHHHHHHHHHhhcCCCC---
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG--SSR----------GNQSVFGKKLAEMHKAGKSS--- 67 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~--~~~----------~~~~~lg~~La~lH~~~~~~--- 67 (240)
..|+++|+.+++..+++||+||.++. +..+++||+++|. .+. ..++++|..|++..-.+...
T Consensus 82 ~~Ea~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~ 158 (418)
T PLN02756 82 YFEATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHD 158 (418)
T ss_pred HHHHHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccC
Confidence 46789999998888899999999994 5789999999883 221 34688999999884333210
Q ss_pred --------CCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHh-cCChHHHHHHHHHHHHHhhhhcCCCCCc
Q 026343 68 --------KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP 138 (240)
Q Consensus 68 --------~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~p 138 (240)
..|- ..+..|.-+ -..-.++.+.+.-......+.+....+. ..++++...+.++..+ ++ ...+
T Consensus 159 ~~~kk~~~~~f~-~N~elc~it-EdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~---f~---~~~~ 230 (418)
T PLN02756 159 TTEHKRAVAEFC-GNVELCRLT-EQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSM---FC---ERAQ 230 (418)
T ss_pred hhhhhHHHHHhc-CCHHHHHHH-HhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHH---HH---hccc
Confidence 0010 001110000 0000000000000000011222222111 1244444444444332 33 3689
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
+|+|||||+|||++++++ +.+||++ ++|||+++|++.+
T Consensus 231 ~L~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~ 269 (418)
T PLN02756 231 ALVHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAF 269 (418)
T ss_pred ceeecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHH
Confidence 999999999999998765 8999986 8999999999985
No 23
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.68 E-value=1.6e-15 Score=127.87 Aligned_cols=151 Identities=19% Similarity=0.175 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDV 74 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~ 74 (240)
...|.++++.|++. + .+|+++..... ..||+|++|.++. ....++|+.|++||+...+......
T Consensus 47 r~~E~~~~~~l~~~-g-~~P~~~~~~~~-----~~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~-- 117 (302)
T cd05156 47 RERELVVFARLSER-N-LGPKLYGIFPN-----GRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEER-- 117 (302)
T ss_pred hHHHHHHHHHHHhC-C-CCCceEEEeCC-----CchhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcC--
Confidence 36899999999986 4 58999988742 5799999998763 2468999999999998753100000
Q ss_pred CCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcC----------Ch---HHHHHHHHHHHHHhhhhcC-CCCCcce
Q 026343 75 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG----------DS---TIYQRGHRLMKNLAPLFEG-VNVEPCL 140 (240)
Q Consensus 75 ~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~----------~~---~~~~~~~~~~~~~~~~l~~-~~~~p~l 140 (240)
. ..+ ..|. . +..+......... .. ...+.+.++.+.+...... ...+.|+
T Consensus 118 ~----~~~------~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 181 (302)
T cd05156 118 D----LTP------AIWK-L-----LKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVF 181 (302)
T ss_pred c----ccc------hHHH-H-----HHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceE
Confidence 0 000 0110 0 1111111110000 00 0111112222222211110 1367899
Q ss_pred eccCCCCCCeeecCC----CCeEEEccC-CCCCchhhhhHhh
Q 026343 141 LHGDLWSGNISSDKN----GEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 141 vHgDl~~~Nvlv~~~----~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
||||++++|||++++ +...+|||+ +.+|+|.+|+|..
T Consensus 182 cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~ 223 (302)
T cd05156 182 CHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANH 223 (302)
T ss_pred EecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHH
Confidence 999999999999874 668899985 7899999999975
No 24
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.68 E-value=9.2e-16 Score=129.88 Aligned_cols=198 Identities=12% Similarity=0.119 Sum_probs=115.3
Q ss_pred HHHHHHHHHHhcCCCCCccceeecc-cC-----CCceEEEEeeccCCCC-C--chHHHHHHHHHHHhhcCCCCCCCCCCC
Q 026343 4 GEALGLGAMYETRTIRAPRPFKVGA-LP-----TGGSYIIMEFIEFGSS-R--GNQSVFGKKLAEMHKAGKSSKGFGFDV 74 (240)
Q Consensus 4 ~E~~~L~~l~~~~~v~vP~v~~~~~-~~-----~~~~~~vme~l~G~~~-~--~~~~~lg~~La~lH~~~~~~~~~g~~~ 74 (240)
....+++.|++. |+++|.++.... .. .+..|+||+|++|... . ..+.++|+.||+||..+....... .
T Consensus 46 ~~~~~~~~L~~~-G~~~~~~~~~t~~G~~~~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~ 122 (309)
T TIGR02904 46 SFVSQIQVLSEK-GFSRIVPVYPTKDGSYYLFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--E 122 (309)
T ss_pred HHHHHHHHHHHc-CCCcCCceeecCCCCeeeEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--H
Confidence 456778889886 788766663322 21 3567999999999532 1 347899999999999876311110 0
Q ss_pred CCccccccc-cCCCcccHHHHHHHhhhHHHHHHHHHh-cCC----------hHHHHHHHHHHHHHhhhh----cCCCCCc
Q 026343 75 DNTIGSTPQ-INKWTSNWIEFYAEHRLGYQLKLALDQ-YGD----------STIYQRGHRLMKNLAPLF----EGVNVEP 138 (240)
Q Consensus 75 ~~~~g~~~~-~~~~~~~w~~~~~~~~l~~~l~~~~~~-~~~----------~~~~~~~~~~~~~~~~~l----~~~~~~p 138 (240)
.. .+. ...+...|..... .+.......... ..+ ......+..+.+.+.++. .....+.
T Consensus 123 ~~----~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 196 (309)
T TIGR02904 123 EE----LKKHYERTLSRWENIPE--GLEEFIVEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRT 196 (309)
T ss_pred hH----HHhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcce
Confidence 00 000 0111122321110 011111111110 001 111222233333332221 1113567
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhhh--h---cCC----CHHHHHHhhhcCCCCcCHHHHHHHHH
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW--C---AGF----GGSFYNSYFEVMPKQPGFEKRRDLYM 208 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~--~---~~~----~~~~~~~Y~~~~~~~~~~~~r~~~y~ 208 (240)
++||||++++|||+++++..+||||+ +.+|+|+.||+.+. . .++ ..+++++|.+.++++++..+.+..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~~~L 276 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASFASPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLTSYL 276 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999888779999984 78999999999652 1 233 26899999999999876444555444
Q ss_pred HH
Q 026343 209 LY 210 (240)
Q Consensus 209 l~ 210 (240)
++
T Consensus 277 ~f 278 (309)
T TIGR02904 277 AY 278 (309)
T ss_pred hC
Confidence 44
No 25
>PRK06148 hypothetical protein; Provisional
Probab=99.65 E-value=1.6e-14 Score=138.95 Aligned_cols=186 Identities=13% Similarity=0.112 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHhc-CCCCCccceeecccC--------CC--ceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcC
Q 026343 3 EGEALGLGAMYET-RTIRAPRPFKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAG 64 (240)
Q Consensus 3 ~~E~~~L~~l~~~-~~v~vP~v~~~~~~~--------~~--~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~ 64 (240)
+.|.++|..|++. .++|||+|+...... +| ..+.+|+|++|.++. ...+++|+.|++||...
T Consensus 66 ~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al 145 (1013)
T PRK06148 66 DFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRAL 145 (1013)
T ss_pred HHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 4577899999875 469999999765331 22 357789999998753 23689999999999975
Q ss_pred CCCCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhh----hhcCCCCCcce
Q 026343 65 KSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCL 140 (240)
Q Consensus 65 ~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~p~l 140 (240)
.. |..+.. .....|...... .+...+. ...+++.+..++++.+...+ .+. ..+..+
T Consensus 146 ~~---F~~p~~------~r~~~Wdl~~~~-----~l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~v 205 (1013)
T PRK06148 146 QG---FMHPGA------LRDLDWDLRHAG-----RARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQV 205 (1013)
T ss_pred hc---CCCCCc------ccccccccccch-----hhhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcce
Confidence 42 332110 011223211000 1111111 11234444555555544332 232 356789
Q ss_pred eccCCCCCCeeecCCC---CeEEEcc-CCCCCchhhhhHhh--hh--cC-----CCHHHHHHhhhcCCCCcCHHHHHHHH
Q 026343 141 LHGDLWSGNISSDKNG---EPVILDP-ACYYGHNEAEFGMS--WC--AG-----FGGSFYNSYFEVMPKQPGFEKRRDLY 207 (240)
Q Consensus 141 vHgDl~~~Nvlv~~~~---~~~iiD~-~~~~Gd~~~Dla~~--~~--~~-----~~~~~~~~Y~~~~~~~~~~~~r~~~y 207 (240)
||||+++.||+|++++ .++|||| ++.++++.+|||+. ++ .. ...+|++||.+.+|+++...+.+...
T Consensus 206 IHgDln~~NiLv~~~~~~~isGiIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~l 285 (1013)
T PRK06148 206 IHNDANDYNILVDADDGERISGLIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDL 285 (1013)
T ss_pred ECCCCCcccEEEcCCCCcceEEEEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 9999999999998773 4789998 68899999999975 22 11 12479999999999987655555544
Q ss_pred H
Q 026343 208 M 208 (240)
Q Consensus 208 ~ 208 (240)
.
T Consensus 286 i 286 (1013)
T PRK06148 286 I 286 (1013)
T ss_pred H
Confidence 3
No 26
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.65 E-value=3.6e-15 Score=114.96 Aligned_cols=116 Identities=22% Similarity=0.219 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCc-------hHHHHHHHHHHHhhcCCCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG-------NQSVFGKKLAEMHKAGKSSKGFGFDV 74 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~-------~~~~lg~~La~lH~~~~~~~~~g~~~ 74 (240)
++.|+.+|+.+++. ..+|+++.... +..++||||++|.++.. ...++++.|++||+..
T Consensus 39 ~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~---------- 103 (170)
T cd05151 39 RENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSP---------- 103 (170)
T ss_pred HHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhCCC----------
Confidence 57899999999885 44899998763 35689999999976431 1122222222222211
Q ss_pred CCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecC
Q 026343 75 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK 154 (240)
Q Consensus 75 ~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~ 154 (240)
..+++++|||++++||+++
T Consensus 104 ------------------------------------------------------------~~~~~~~HgD~~~~Nil~~- 122 (170)
T cd05151 104 ------------------------------------------------------------LPDLVPCHNDLLPGNFLLD- 122 (170)
T ss_pred ------------------------------------------------------------CCCceeecCCCCcCcEEEE-
Confidence 1266899999999999998
Q ss_pred CCCeEEEccC-CCCCchhhhhHhhhh-cCC----CHHHHHHhhhc
Q 026343 155 NGEPVILDPA-CYYGHNEAEFGMSWC-AGF----GGSFYNSYFEV 193 (240)
Q Consensus 155 ~~~~~iiD~~-~~~Gd~~~Dla~~~~-~~~----~~~~~~~Y~~~ 193 (240)
++...+|||+ +.+|+|.+|++.+.. ..+ ...|++.|...
T Consensus 123 ~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~~~ 167 (170)
T cd05151 123 DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYFGR 167 (170)
T ss_pred CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHhCC
Confidence 4458899985 679999999997632 223 25789999864
No 27
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.64 E-value=5.6e-15 Score=114.80 Aligned_cols=155 Identities=14% Similarity=0.193 Sum_probs=100.9
Q ss_pred EEEeeccCCCCCc--hHHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCC
Q 026343 36 IIMEFIEFGSSRG--NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 113 (240)
Q Consensus 36 ~vme~l~G~~~~~--~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~ 113 (240)
++.||++|.+.+. ...++++.++++|+.+. +|++.+ .+ .++..+.+.......+
T Consensus 1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~~------------------l~--~~i~~Yw~~l~~~~~~ 56 (188)
T PRK10271 1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRIT------------------LL--PLLEQYWQQSDPARRT 56 (188)
T ss_pred CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCCC------------------HH--HHHHHHHHHhccccCC
Confidence 4679999998753 57899999999999664 332211 11 1345555544332223
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhhhhcC--CCHHHHHHh
Q 026343 114 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCAG--FGGSFYNSY 190 (240)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~~~~--~~~~~~~~Y 190 (240)
+.. .+....+.......+.+.++||||++|+|+++++++ ..+|||+ +..|||.+|||.++... -.+.|++.|
T Consensus 57 ~~w----l~~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y 131 (188)
T PRK10271 57 PFW----LRMLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY 131 (188)
T ss_pred HHH----HHHHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence 321 123333333222224678999999999999998776 7799985 78999999999876421 125799999
Q ss_pred hhcCCCCcC-HHHHHHHHHHHHHHHHHHhh
Q 026343 191 FEVMPKQPG-FEKRRDLYMLYHYLNHYNLF 219 (240)
Q Consensus 191 ~~~~~~~~~-~~~r~~~y~l~~~l~~~~~~ 219 (240)
......++. +.+|..-|.....+....+|
T Consensus 132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWy 161 (188)
T PRK10271 132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWF 161 (188)
T ss_pred hCccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 954334544 67888888766555444444
No 28
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.63 E-value=5.9e-15 Score=128.80 Aligned_cols=196 Identities=19% Similarity=0.261 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhc--CCCCCccceeecccCCC---ceEEEEeeccCCCC-------C-chHHHHHHHHHHHhhcCCCC--
Q 026343 3 EGEALGLGAMYET--RTIRAPRPFKVGALPTG---GSYIIMEFIEFGSS-------R-GNQSVFGKKLAEMHKAGKSS-- 67 (240)
Q Consensus 3 ~~E~~~L~~l~~~--~~v~vP~v~~~~~~~~~---~~~~vme~l~G~~~-------~-~~~~~lg~~La~lH~~~~~~-- 67 (240)
.+|..+.+.+.+. .++|+|++|......++ .++++||++++... + ....++.+.||++|+.+..-
T Consensus 114 NrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~eql~~iv~aLA~~~A~sl~ls~ 193 (414)
T PF07914_consen 114 NREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSVEQLLQIVRALAKFHALSLKLSE 193 (414)
T ss_pred HHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCHHHHHHHHHHHHHHHHhHccCCH
Confidence 5789999999886 48999999998766432 59999999998642 1 34688999999999987631
Q ss_pred CCCCCCCCCccccccccCCC-cccHHHHHHHhhhHHHHHHHHHhc---CChHHHHHHHHHHH------------HHhhhh
Q 026343 68 KGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQY---GDSTIYQRGHRLMK------------NLAPLF 131 (240)
Q Consensus 68 ~~~g~~~~~~~g~~~~~~~~-~~~w~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~~~~~~------------~~~~~l 131 (240)
..... ..| ..+ ...+..++....+........... .++.+...++.+.. .+.+.+
T Consensus 194 ee~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~~~i~~~l 264 (414)
T PF07914_consen 194 EEKKS----ISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIEKFEHYLPDIKNFEKASNINKQL 264 (414)
T ss_pred HHhhh----ccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHHHHHHhcccHHhHHHHhhhHHhc
Confidence 10000 000 000 011122222211222111111111 01222222222111 112222
Q ss_pred cCCCCCcceeccCCCCCCeeecCCCC-----eEEEcc-CCCCCchhhhhHhhhhcCC--------C--------HHHHHH
Q 026343 132 EGVNVEPCLLHGDLWSGNISSDKNGE-----PVILDP-ACYYGHNEAEFGMSWCAGF--------G--------GSFYNS 189 (240)
Q Consensus 132 ~~~~~~p~lvHgDl~~~Nvlv~~~~~-----~~iiD~-~~~~Gd~~~Dla~~~~~~~--------~--------~~~~~~ 189 (240)
..+|||||||||..|||++.++. .+|||| .++.|.|..||+++.+... . +.|.+.
T Consensus 265 ---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~edRR~~~~~lL~~Yy~~f~~~ 341 (414)
T PF07914_consen 265 ---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSGEDRREHTEELLEYYYDTFTEA 341 (414)
T ss_pred ---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999988532 479997 6799999999998742111 1 223333
Q ss_pred hhhcCCCCcCHHHHHHHHHHH
Q 026343 190 YFEVMPKQPGFEKRRDLYMLY 210 (240)
Q Consensus 190 Y~~~~~~~~~~~~r~~~y~l~ 210 (240)
+......+=.+++-...|+++
T Consensus 342 l~~~~~~PfT~eqL~~sY~l~ 362 (414)
T PF07914_consen 342 LEDGGKAPFTLEQLKDSYRLY 362 (414)
T ss_pred HhccCCCCccHHHHHHHHHHH
Confidence 311112333568888888876
No 29
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=1.1e-14 Score=114.35 Aligned_cols=181 Identities=15% Similarity=0.184 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC---------chHHHHHHHHHHHhhcCCCCCCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR---------GNQSVFGKKLAEMHKAGKSSKGFGF 72 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~---------~~~~~lg~~La~lH~~~~~~~~~g~ 72 (240)
++.|++-|++++.. +++||+|+.+... .++.|++|+.++|.+.. ..+..+++.|+.||.++.....|+.
T Consensus 59 L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~~~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~ 136 (266)
T COG3231 59 LEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGEDASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDR 136 (266)
T ss_pred hhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCCcccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcch
Confidence 67899999999997 7999999999875 67899999999998763 2467899999999997753322321
Q ss_pred CCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChH------HHHHHHHHHHHHhhhhcCCCCCcceeccCCC
Q 026343 73 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST------IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 146 (240)
Q Consensus 73 ~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~ 146 (240)
.. ..++...-+..+....++. ......++.+.+...... ...-|++|||..
T Consensus 137 rl----------------------~~rl~~a~~r~~a~~vdesdfd~e~qgr~~~El~d~L~~~rp~-~edLVv~HGDAC 193 (266)
T COG3231 137 RL----------------------ARRLAKARARVRAGLVDESDFDEERQGRTAEELFDELEARRPA-VEDLVVTHGDAC 193 (266)
T ss_pred HH----------------------HHHHHHHHHHHhccCCChhhcChhhcCCCHHHHHHHHHhcCCc-hhhceeecCccc
Confidence 00 1112111111111111211 011223455544332222 355699999999
Q ss_pred CCCeeecCCCCeEEEcc-CCCCCchhhhhHhh-hh----c---CCCHHHHHHhhhcCCCCcCHHHHHHHHHHHH
Q 026343 147 SGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-WC----A---GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYH 211 (240)
Q Consensus 147 ~~Nvlv~~~~~~~iiD~-~~~~Gd~~~Dla~~-~~----~---~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~~ 211 (240)
.-|+|+++++..++||. +..+||+..||+.. |. . .+.+.|++.|.-.. .+ ..|+.+|++..
T Consensus 194 LPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl~g~~~~~~fl~~Yg~~~-~d---~~rl~~yr~ld 263 (266)
T COG3231 194 LPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNLGGDVWDDPFLDAYGRGA-ID---PARLAYYRLLD 263 (266)
T ss_pred CcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhccCcchhhHHHHHHhCcCC-CC---HHHHHHHHHHH
Confidence 99999998877899996 45799999999975 21 1 25688999999532 22 58889987754
No 30
>PRK06149 hypothetical protein; Provisional
Probab=99.61 E-value=5.7e-14 Score=134.87 Aligned_cols=187 Identities=15% Similarity=0.121 Sum_probs=116.4
Q ss_pred hHHHHHHHHHHHhc-CCCCCccceeecccC-------C--CceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcC
Q 026343 2 FEGEALGLGAMYET-RTIRAPRPFKVGALP-------T--GGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAG 64 (240)
Q Consensus 2 ~~~E~~~L~~l~~~-~~v~vP~v~~~~~~~-------~--~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~ 64 (240)
+..|.++|+.|++. .+++||+|+.....+ + +..+.+++|++|.++. ...+++|+.+++||...
T Consensus 70 l~~e~~~l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al 149 (972)
T PRK06149 70 LEAQHAALRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARAL 149 (972)
T ss_pred HHHHHHHHHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 35788899999986 379999999765432 1 2457899999998653 24689999999999976
Q ss_pred CCCCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHH----HHhhhhcCCCCCcce
Q 026343 65 KSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK----NLAPLFEGVNVEPCL 140 (240)
Q Consensus 65 ~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~p~l 140 (240)
.. |. .+.. .....|.- . +....+........++..+..++++.+ ++...+. ..+..+
T Consensus 150 ~~---f~--hp~~----~r~~~Wdl----~----~~~~~~~~ll~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~ 210 (972)
T PRK06149 150 AD---FD--HPGL----DRTLQWDL----R----HAGPVVAHLLSHITDPAQRARIAEATRDAARRLQPLAP--ALPLQA 210 (972)
T ss_pred cC---CC--CCCC----CCccccch----h----hhHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccc
Confidence 53 22 1110 01112211 0 000011111111123333333344333 3333332 246789
Q ss_pred eccCCCCCCeeecCCC-----CeEEEcc-CCCCCchhhhhHhh---hhc--CC----CHHHHHHhhhcCCCCcCHHHHHH
Q 026343 141 LHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMS---WCA--GF----GGSFYNSYFEVMPKQPGFEKRRD 205 (240)
Q Consensus 141 vHgDl~~~Nvlv~~~~-----~~~iiD~-~~~~Gd~~~Dla~~---~~~--~~----~~~~~~~Y~~~~~~~~~~~~r~~ 205 (240)
||||++..||+|+++. ..+|||| ++.+++..+|||+. ++. .. ...|++||.+++|+++...+.+.
T Consensus 211 IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~ 290 (972)
T PRK06149 211 VHLDITDDNVVGSRDADGRWQPDGVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALW 290 (972)
T ss_pred cCCCCCcccEEEcCCCCCCcceeEEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999999998652 3589998 68899999999975 221 11 24699999999999876555544
Q ss_pred HH
Q 026343 206 LY 207 (240)
Q Consensus 206 ~y 207 (240)
..
T Consensus 291 ~l 292 (972)
T PRK06149 291 PL 292 (972)
T ss_pred HH
Confidence 33
No 31
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.60 E-value=2.2e-14 Score=121.87 Aligned_cols=160 Identities=20% Similarity=0.237 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC-----------CchHHHHHHHHHHHhhcCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFG 71 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g 71 (240)
..|+++|+..++..|-.||+||.++ ++...++||+++.... ...+.++|+.|++.|..+.. +.
T Consensus 47 ~~E~~~L~~~~~~~P~~vP~vy~~D---~e~~~~vMEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~ 120 (370)
T TIGR01767 47 RIESSALIRQGEHVPHLVPRIFHFD---TEMAVTVMEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YA 120 (370)
T ss_pred HHHHHHHHHhhccCccccCeEEEEc---cccceehHhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cc
Confidence 4699999999997666799999999 4578899999976431 24579999999999976531 11
Q ss_pred C------------CCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-CChHHHHHHHHHHHHHhhhhcCCCCCc
Q 026343 72 F------------DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEP 138 (240)
Q Consensus 72 ~------------~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p 138 (240)
. ..+..+...- ..-.+..+... ..+++.+.+....+.. .++++...+.+ ++..+- ....
T Consensus 121 ~~~~~kk~l~~~f~N~eLc~itE-dlvft~py~~~-~~n~~~p~l~~~~~~l~~d~~l~~~v~~----Lk~~f~--~~~~ 192 (370)
T TIGR01767 121 LEPKVKKALVAQFTNPELCDITE-RLVFTDPYFDH-DTNDFEEELRPFVAKLRNDDSLKIEAAK----LKHSFL--ASAE 192 (370)
T ss_pred cCHHHHHHHHHHhCCHHHHHHHH-Hhccccchhhh-hhhcCChhHHHHHHHHhcCHHHHHHHHH----HHHhhc--cCcc
Confidence 0 0111110000 00000000000 0011222222221111 12222222222 222222 2567
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
+|+|||||+|||++++++ +.+|||+ +++|++.+|+|.+
T Consensus 193 ~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~Dlg~~ 231 (370)
T TIGR01767 193 TLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFDIGQF 231 (370)
T ss_pred eeeeccCCcccEEEcCCC-CEEEcCcccccCchHhhHHHH
Confidence 999999999999997665 8899985 8999999999976
No 32
>PLN02236 choline kinase
Probab=99.60 E-value=2.4e-13 Score=116.69 Aligned_cols=183 Identities=21% Similarity=0.222 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
..|.++++.+++. ++ .|+++..... ..+.+|++|.+++ ....++++.|+++|+...+..
T Consensus 84 ~~E~~~~~~l~~~-gl-~P~~~~~~~~-----g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~------- 149 (344)
T PLN02236 84 DDEIRTFECMSRH-GQ-GPRLLGRFPN-----GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGP------- 149 (344)
T ss_pred HHHHHHHHHHHHc-CC-CCceEEEECC-----ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCC-------
Confidence 5799999999986 55 8999987632 2689999998764 234799999999999764210
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCC----hHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCee
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD----STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNIS 151 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvl 151 (240)
+.. ..|. ++..++........+ ......+.+.++.+.+.+.....+.|+||+|++++|||
T Consensus 150 ------~~~----~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil 213 (344)
T PLN02236 150 ------KNV----LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIM 213 (344)
T ss_pred ------CCc----hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEE
Confidence 000 1111 122222222111100 00112223333334444433235679999999999999
Q ss_pred ecCC-CCeEEEccC-CCCCchhhhhHhhhh---cCC--------------C----HHHHHHhhhcCC--CCc----CHHH
Q 026343 152 SDKN-GEPVILDPA-CYYGHNEAEFGMSWC---AGF--------------G----GSFYNSYFEVMP--KQP----GFEK 202 (240)
Q Consensus 152 v~~~-~~~~iiD~~-~~~Gd~~~Dla~~~~---~~~--------------~----~~~~~~Y~~~~~--~~~----~~~~ 202 (240)
++++ +...+|||+ +.+|+|.+|+|...+ ..+ . ..|++.|.+..+ .++ .+..
T Consensus 214 ~~~~~~~~~lID~Eya~~~~~~~Dia~~~~e~~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~g~~~~~~~~~~l~~ 293 (344)
T PLN02236 214 IDEETRAITIIDYEYASYNPVAYDIANHFCEMAADYHSETPHILDYSKYPGEEERRRFIRTYLSSSGEEPSDEEVEQLLD 293 (344)
T ss_pred EeCCCCcEEEEeehhccccchHHHHHHHHHHHHHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Confidence 9764 568999985 789999999997522 111 1 468999997432 121 2344
Q ss_pred HHHHHHHHHHHHH
Q 026343 203 RRDLYMLYHYLNH 215 (240)
Q Consensus 203 r~~~y~l~~~l~~ 215 (240)
++.+|.+...+-|
T Consensus 294 ~v~~~~~~~~l~W 306 (344)
T PLN02236 294 DVEKYTLASHLFW 306 (344)
T ss_pred HHHHHhhHhHHHH
Confidence 5556766655544
No 33
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.59 E-value=1e-14 Score=125.26 Aligned_cols=162 Identities=14% Similarity=0.148 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC-----------CchHHHHHHHHHHHhhcCCCC----
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSS---- 67 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~---- 67 (240)
..|+++|+.+++..|-.||+||.++ +....++||+++.... ...++++|..|++.|..+...
T Consensus 80 ~~E~~aL~~~~~~~P~~VP~vy~~D---~e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~ 156 (409)
T PRK12396 80 RIESDVLQLEEELAPGLVPKVYLFD---SVMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNH 156 (409)
T ss_pred HHHHHHHHHHHhhCCCcCCeEEEEC---cHHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccCh
Confidence 5699999999998777799999999 4578999999976331 145799999999999865420
Q ss_pred -------CCCCCCCCCccccccccCCCcccHHHHHHHhh-hHHHHHHHHHh-cCChHHHHHHHHHHHHHhhhhcCCCCCc
Q 026343 68 -------KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHR-LGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP 138 (240)
Q Consensus 68 -------~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~-l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~p 138 (240)
..|. .+..+...-. ...++.+.+.-..++ ..+.++...+. ..|.++...+.++.. +++ ....
T Consensus 157 ~~kk~~v~~f~--N~eLc~ited-lvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~---~F~---~~~~ 227 (409)
T PRK12396 157 KEKKELVKNYI--NPELCEITED-LVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKF---SFM---TNAQ 227 (409)
T ss_pred HHHHHhhHhcC--CHHHHHHhcc-cccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHH---HHH---hcch
Confidence 0011 1111110000 000000000000000 11111111111 124444333333333 233 2577
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc-CCCCCchhhhhHhh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS 177 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~-~~~~Gd~~~Dla~~ 177 (240)
+|||||||+||||+++++ +.|||+ .++||++.+|++.+
T Consensus 228 aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~ 266 (409)
T PRK12396 228 ALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNV 266 (409)
T ss_pred hhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHH
Confidence 999999999999998764 999997 57899999999975
No 34
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.58 E-value=2.5e-13 Score=115.98 Aligned_cols=161 Identities=18% Similarity=0.257 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
+.|.++++.+++. ++ .|+++..... | ++.+|++|.+++ .....+++.|++||+...+.. .
T Consensus 61 ~~E~~il~~l~~~-gl-~P~~l~~~~~--G---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~-~----- 127 (330)
T PLN02421 61 ERELQAIKYLSAA-GF-GAKLLGVFGN--G---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGS-K----- 127 (330)
T ss_pred HHHHHHHHHHHhc-CC-CCceeEEeCC--c---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCC-C-----
Confidence 5799999999986 45 4888877632 2 699999998764 236789999999999764210 0
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-CChHH--------HHHHHHHHHHHhhhhcCCCCCcceeccCCC
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 146 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-~~~~~--------~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~ 146 (240)
. ...|. ++..++..+.... .++.. ...+.+.+..+.+.+.....+.|+||+|+.
T Consensus 128 -----~------~~~~~------~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~ 190 (330)
T PLN02421 128 -----E------PQLWN------DIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLL 190 (330)
T ss_pred -----C------CcHHH------HHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCC
Confidence 0 01111 1222222222111 11110 112222233334444332467799999999
Q ss_pred CCCeeecCC-CCeEEEccC-CCCCchhhhhHhhhh--cCC-------C-----HHHHHHhhhc
Q 026343 147 SGNISSDKN-GEPVILDPA-CYYGHNEAEFGMSWC--AGF-------G-----GSFYNSYFEV 193 (240)
Q Consensus 147 ~~Nvlv~~~-~~~~iiD~~-~~~Gd~~~Dla~~~~--~~~-------~-----~~~~~~Y~~~ 193 (240)
++|||++++ +...+|||+ +.++||.+|||...+ .++ + ..|++.|...
T Consensus 191 ~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 253 (330)
T PLN02421 191 SGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAGFDCDYSLYPSKEEQYHFFRHYLRP 253 (330)
T ss_pred cccEEEeCCCCcEEEEcccccCCCccHHHHHHHHHHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence 999999754 568999986 789999999997532 222 2 3689999864
No 35
>PTZ00384 choline kinase; Provisional
Probab=99.36 E-value=4.3e-11 Score=103.83 Aligned_cols=147 Identities=14% Similarity=0.018 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCC--CCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSS--KGFGFD 73 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~--~~~g~~ 73 (240)
+.|.++++.|++. --.|+++..... +++.|||+|.+++ .....+++.|+++|+..... ..++
T Consensus 100 ~~E~~i~~~Ls~~--glgP~l~~~f~~-----g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~-- 170 (383)
T PTZ00384 100 DLQYNIAKLLGDN--NFGPKIIGRFGD-----FTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWD-- 170 (383)
T ss_pred HHHHHHHHHHHhC--CCCCeEEEecCC-----EEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCcccc--
Confidence 4699999999985 568999998753 7999999999874 23579999999999975311 0010
Q ss_pred CCCccccccccCCCcccHHHHHHHhhhHHHHHHHH----Hh--cCCh-HHHHHHHHHHHHHhhhhcC---CCCCcceecc
Q 026343 74 VDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL----DQ--YGDS-TIYQRGHRLMKNLAPLFEG---VNVEPCLLHG 143 (240)
Q Consensus 74 ~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~----~~--~~~~-~~~~~~~~~~~~~~~~l~~---~~~~p~lvHg 143 (240)
.|...|. ++..++..+. +. ..+. .+...++.+.+.+...+.. ...+.|+||.
T Consensus 171 ------------~~p~~~~------~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHN 232 (383)
T PTZ00384 171 ------------RTPMFLT------KISTWSQHVERIIKKYNLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHN 232 (383)
T ss_pred ------------CcchHHH------HHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeec
Confidence 0111111 1222221111 10 0111 1222233332223322211 1235799999
Q ss_pred CCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 144 DLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 144 Dl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
|+.++|||.+++ ...+|||+ +.+++|.+|||..
T Consensus 233 DL~~gNIL~~~~-~l~lID~EYA~~n~~~fDLAn~ 266 (383)
T PTZ00384 233 DLFFTNILDFNQ-GIYFIDFDFAGFNYVGWEIANF 266 (383)
T ss_pred cCCcccEEecCC-CEEEEEeccccCCchHhHHHHH
Confidence 999999998655 48899986 7899999999965
No 36
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.36 E-value=2.4e-12 Score=103.15 Aligned_cols=147 Identities=22% Similarity=0.200 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
+.|..+++.+++. --.|+++..... ..+.+|++|.+++ .....+++.|++||+.+......
T Consensus 21 ~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~~~~~~~~----- 88 (211)
T PF01633_consen 21 ENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSIPISPNSK----- 88 (211)
T ss_dssp HHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTHHHTTSSS-----
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHHHHHhhcccccccC-----
Confidence 5799999999985 557889988743 4688999998764 23578999999999976511000
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHH--------HHHHHhc-CChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCC
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQL--------KLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 146 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l--------~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~ 146 (240)
.. ..|. ++..+. ....... ........+.+....+.+.+.....+-|+||+|++
T Consensus 89 -------~~----~~~~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~ 151 (211)
T PF01633_consen 89 -------KP----DLWD------RIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLN 151 (211)
T ss_dssp -------S-----HHHH------HHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--S
T ss_pred -------cc----hHHH------HhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCc
Confidence 00 0111 111110 0000000 00111122233333344444332355799999999
Q ss_pred CCCeee-cCCCCeEEEccC-CCCCchhhhhHhhh
Q 026343 147 SGNISS-DKNGEPVILDPA-CYYGHNEAEFGMSW 178 (240)
Q Consensus 147 ~~Nvlv-~~~~~~~iiD~~-~~~Gd~~~Dla~~~ 178 (240)
++|||+ +.++...+|||+ +.++++.+|||...
T Consensus 152 ~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f 185 (211)
T PF01633_consen 152 PGNILINNKDGEVKLIDFEYAGYNDRAFDIANFF 185 (211)
T ss_dssp GGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHH
T ss_pred cccEEeccCCCeEEEecHHHHhhccchhhHHHHH
Confidence 999999 555678999986 78999999999764
No 37
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.36 E-value=7.4e-12 Score=105.23 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=96.1
Q ss_pred ChHHHHHHHHHHHhcC----------CCCCccceeecccCCCceEEEEeeccCCC---C------C-chHHHHHHHHHHH
Q 026343 1 MFEGEALGLGAMYETR----------TIRAPRPFKVGALPTGGSYIIMEFIEFGS---S------R-GNQSVFGKKLAEM 60 (240)
Q Consensus 1 ~~~~E~~~L~~l~~~~----------~v~vP~v~~~~~~~~~~~~~vme~l~G~~---~------~-~~~~~lg~~La~l 60 (240)
+|++|..+.+.+.... ...+|++|..... ++..++|||-+.... . + .....+.+.||++
T Consensus 49 ~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~f 127 (294)
T PF02958_consen 49 SFRREIFFYRELLPELEELQKEAGDPFKFFPKCYYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKF 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccceeeceEEEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHH
Confidence 3678888887665421 1347999998854 346899999996432 1 1 3467889999999
Q ss_pred hhcCCCC-----CCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcC-----ChHHHHHHHHHHHHHhhh
Q 026343 61 HKAGKSS-----KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-----DSTIYQRGHRLMKNLAPL 130 (240)
Q Consensus 61 H~~~~~~-----~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 130 (240)
|+.+... ..++-..................+..++.. .+....+...+... ...+......+.+.+...
T Consensus 128 HA~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 206 (294)
T PF02958_consen 128 HAASWALEEKDPELFEELSSGLFEEPFFREELEEWFEEFFEQ-GLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQEL 206 (294)
T ss_pred HHHHHHHHHhCchhhhhccccceeccchhhhhhHHHHHHHHH-HHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 9976421 111100000000000000001111222211 11111222211110 012223333445554444
Q ss_pred hcC-CCCCcceeccCCCCCCeeecCCC-----CeEEEcc-CCCCCchhhhhHhhhh
Q 026343 131 FEG-VNVEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSWC 179 (240)
Q Consensus 131 l~~-~~~~p~lvHgDl~~~Nvlv~~~~-----~~~iiD~-~~~~Gd~~~Dla~~~~ 179 (240)
... .....||||||+|.+|||+..++ .+.+||| .+.+|.|..||+.+.+
T Consensus 207 ~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~Dl~~fl~ 262 (294)
T PF02958_consen 207 VDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAIDLAYFLY 262 (294)
T ss_pred hccccCCceEEEcCccCHHhEeEccccccccccceeeccccccCCCcHhHHHHHHH
Confidence 422 13456999999999999996652 3689997 5789999999997643
No 38
>PTZ00296 choline kinase; Provisional
Probab=99.35 E-value=8.2e-11 Score=103.82 Aligned_cols=150 Identities=12% Similarity=0.069 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
..|..+++.|++. ++ .|+++.... ++.+.+|++|.+++ .....+++.|++||+.+... ... .
T Consensus 157 ~~E~~v~~~ls~~-gi-~P~l~~~f~-----gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~-~~~--~- 225 (442)
T PTZ00296 157 ISEFEVYKTMSKY-RI-APQLLNTFS-----GGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKR-HLP--E- 225 (442)
T ss_pred HHHHHHHHHHHHC-CC-CCceEEEeC-----CCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccc-cCc--h-
Confidence 4699999999986 34 688886542 47789999998664 34689999999999975310 000 0
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcC-C------hHHHHHHHHHHHHHhhh--hcCCCCCcceeccCCC
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-D------STIYQRGHRLMKNLAPL--FEGVNVEPCLLHGDLW 146 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~-~------~~~~~~~~~~~~~~~~~--l~~~~~~p~lvHgDl~ 146 (240)
.. ..+...|. ++..+...+..... . ..+.+.+..+.+.+... +.....+.|+||+|+.
T Consensus 226 -~f------~~~p~~f~------~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~ 292 (442)
T PTZ00296 226 -HW------DRTPCIFK------MMEKWKNQLSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQ 292 (442)
T ss_pred -hc------cCCCcHHH------HHHHHHHHHHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCC
Confidence 00 00111121 12222222221110 0 01112222222222110 1121356799999999
Q ss_pred CCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 147 SGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 147 ~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
++|||..+++ ..+|||+ +.+.+|.+|||..
T Consensus 293 ~~NiL~~~~~-l~LIDfEYAg~ndpafDIAn~ 323 (442)
T PTZ00296 293 ENNIINTNKC-LRLIDFEYSGYNFLATDIANF 323 (442)
T ss_pred ccceeecCCC-EEEEeecccccccHHHHHHHH
Confidence 9999986554 8899986 7899999999975
No 39
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.35 E-value=2.6e-11 Score=99.15 Aligned_cols=171 Identities=15% Similarity=0.142 Sum_probs=105.1
Q ss_pred HHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC-----Cch---HHHHHHHHHHHhhcCCCC---CCCCCCCCC
Q 026343 8 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGN---QSVFGKKLAEMHKAGKSS---KGFGFDVDN 76 (240)
Q Consensus 8 ~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~-----~~~---~~~lg~~La~lH~~~~~~---~~~g~~~~~ 76 (240)
+=.+|++. +|.||++++.+. +.+++++|-+.-+.. ++. ..+..+.|+.+|....+. ...| .+
T Consensus 73 i~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g---~~ 145 (351)
T COG3178 73 IAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREG---ST 145 (351)
T ss_pred HHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCC---CC
Confidence 34456654 899999999984 578999999854321 122 346778999999987641 1112 00
Q ss_pred ccccccccCCCcccHHHHHHHhhh--HHHHHHHHHhcCChHHHHHHHHHHHHH-hhhhcCCCCCcceeccCCCCCCeeec
Q 026343 77 TIGSTPQINKWTSNWIEFYAEHRL--GYQLKLALDQYGDSTIYQRGHRLMKNL-APLFEGVNVEPCLLHGDLWSGNISSD 153 (240)
Q Consensus 77 ~~g~~~~~~~~~~~w~~~~~~~~l--~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~p~lvHgDl~~~Nvlv~ 153 (240)
. .+|.-+ + .....+-.+ ..++.......++...++.++.+.+.+ ...+ ..+.|+||+|||+-|+|+.
T Consensus 146 ~--~lp~fD---r--~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~---~~~~vlvhRDfh~~NLmw~ 215 (351)
T COG3178 146 H--VLPPFD---R--AAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL---AQPKVLVHRDFHSRNLMWT 215 (351)
T ss_pred C--cCCccc---H--HHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh---cCCceeeeccccCccceec
Confidence 0 112100 0 000111111 122222222223445566666666663 3333 3677999999999999998
Q ss_pred CC----CCeEEEcc-CCCCCchhhhhHhhh---hcCCC----HHHHHHhhhcCC
Q 026343 154 KN----GEPVILDP-ACYYGHNEAEFGMSW---CAGFG----GSFYNSYFEVMP 195 (240)
Q Consensus 154 ~~----~~~~iiD~-~~~~Gd~~~Dla~~~---~~~~~----~~~~~~Y~~~~~ 195 (240)
.+ ..++|||| ++.+|+..||++.+. +-.++ .+.+..|.+.+.
T Consensus 216 ~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~ 269 (351)
T COG3178 216 ADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARR 269 (351)
T ss_pred CCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhh
Confidence 76 24899997 899999999999873 22333 578999998864
No 40
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.34 E-value=4.5e-11 Score=97.79 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=103.4
Q ss_pred HHHH---HHHHHHHhcCCCCCccceeecccCCCceEEEEeec-cCCCCC---------chHHHHHHHHHHHhhcCCCCCC
Q 026343 3 EGEA---LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI-EFGSSR---------GNQSVFGKKLAEMHKAGKSSKG 69 (240)
Q Consensus 3 ~~E~---~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l-~G~~~~---------~~~~~lg~~La~lH~~~~~~~~ 69 (240)
..|. ..|++.+. --+-+++..+ .....++||++ +|.++. .....+++.+++||..+..+..
T Consensus 41 ~~E~~g~~~L~~w~G---~GaVrll~~d---~~~~AlLLErl~~g~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~~p 114 (253)
T PF04655_consen 41 EHEARGEAALRWWNG---RGAVRLLAAD---PERGALLLERLDPGRSLASLPREGDDDEATRIAAGLLRRLHRPAPEPLP 114 (253)
T ss_pred hhhhhHHhHhheeCC---CCceeeeccc---cccchhhhhhccCCCchhhcccccCchHHHHHHHHHHHHHhCCCCCCCC
Confidence 3455 44555544 4455888887 45779999999 556653 1257789999999987542100
Q ss_pred CCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCC
Q 026343 70 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGN 149 (240)
Q Consensus 70 ~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~N 149 (240)
.++ +. ...|...+. ......... .+. ..+.+..+...+++.+ ...++++|||||.+|
T Consensus 115 ~~l---------~~----l~~~~~~l~-----~~~~~~~~~-~~~---~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~N 171 (253)
T PF04655_consen 115 SGL---------PP----LADWFARLF-----ARARERAGA-PPR---RLVDAAAALARELLAS-PGEEVLLHGDLHHGN 171 (253)
T ss_pred ccc---------hh----HHHHHHHHH-----HHhHhhhcc-ccH---HHHHHHHHHHHHHhcC-CCcceeeccccchHh
Confidence 010 00 112221111 111110000 111 2223333333455554 456799999999999
Q ss_pred eeecCCCCeEEEccCCCCCchhhhhHhhhhc---CC----C----HHHHHHhhhcCCCCcCHHHHHHHHHHHHHH
Q 026343 150 ISSDKNGEPVILDPACYYGHNEAEFGMSWCA---GF----G----GSFYNSYFEVMPKQPGFEKRRDLYMLYHYL 213 (240)
Q Consensus 150 vlv~~~~~~~iiD~~~~~Gd~~~Dla~~~~~---~~----~----~~~~~~Y~~~~~~~~~~~~r~~~y~l~~~l 213 (240)
||-...+...+||+....|+|+||++.+.+. .. . ...++...+...++ .+|+.-|.+.+.+
T Consensus 172 IL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i~~r~~~la~~~gld---~~R~~~W~~~~~v 243 (253)
T PF04655_consen 172 ILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERIRRRAALLAEAAGLD---RERILAWAFARAV 243 (253)
T ss_pred hhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHHHHHHHHHHHHHCcC---HHHHHHHHHHHHH
Confidence 9987655578999999999999999976321 11 1 23344444555555 5777777665544
No 41
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.32 E-value=2e-11 Score=91.30 Aligned_cols=111 Identities=26% Similarity=0.283 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST 81 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~ 81 (240)
+..|.+.++.+++. +.++|+++..... .+..+++|||++|.++... +.
T Consensus 38 ~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~~~~--------------~~---------------- 85 (155)
T cd05120 38 REREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETLDEV--------------SE---------------- 85 (155)
T ss_pred HHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeecccC--------------CH----------------
Confidence 57899999999986 6899999988765 4689999999998754321 00
Q ss_pred cccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEE
Q 026343 82 PQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL 161 (240)
Q Consensus 82 ~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~ii 161 (240)
..+ ..+. ..+.+.+..+- . ....+++|||++++||++++++...++
T Consensus 86 -------~~~------~~~~-------------------~~~~~~l~~lh-~-~~~~~i~H~Dl~~~Nil~~~~~~~~l~ 131 (155)
T cd05120 86 -------EEK------EDIA-------------------EQLAELLAKLH-Q-LPLLVLCHGDLHPGNILVDDGKILGII 131 (155)
T ss_pred -------HHH------HHHH-------------------HHHHHHHHHHh-C-CCceEEEecCCCcceEEEECCcEEEEE
Confidence 000 0000 11111111111 1 123689999999999999886678999
Q ss_pred cc-CCCCCchhhhhHhhh
Q 026343 162 DP-ACYYGHNEAEFGMSW 178 (240)
Q Consensus 162 D~-~~~~Gd~~~Dla~~~ 178 (240)
|| .+.++++.+|++.+.
T Consensus 132 Df~~~~~~~~~~d~~~~~ 149 (155)
T cd05120 132 DWEYAGYGPPAFDLAAAL 149 (155)
T ss_pred ecccccCCChHHHHHHHH
Confidence 98 477999999999763
No 42
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=1.6e-11 Score=94.27 Aligned_cols=121 Identities=20% Similarity=0.251 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 82 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~ 82 (240)
..|++.|..+... +||||.+|..+ +....++||||+|..+.... -....
T Consensus 47 ~~Earil~~a~~~-GV~~P~v~dvD---~~~~~I~me~I~G~~lkd~l----------~~~~~----------------- 95 (204)
T COG3642 47 RREARILAKAREA-GVPVPIVYDVD---PDNGLIVMEYIEGELLKDAL----------EEARP----------------- 95 (204)
T ss_pred HHHHHHHHHHHHc-CCCCCeEEEEc---CCCCEEEEEEeCChhHHHHH----------Hhcch-----------------
Confidence 5799999999987 89999999998 45778999999997531100 00000
Q ss_pred ccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 83 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 83 ~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
+... ++ -+.+.+ + -...+|||||.+.|+++.+++ +.+||
T Consensus 96 ----------~~~r--~v--------------------G~~vg~----l----H~~givHGDLTtsNiIl~~~~-i~~ID 134 (204)
T COG3642 96 ----------DLLR--EV--------------------GRLVGK----L----HKAGIVHGDLTTSNIILSGGR-IYFID 134 (204)
T ss_pred ----------HHHH--HH--------------------HHHHHH----H----HhcCeecCCCccceEEEeCCc-EEEEE
Confidence 0000 01 111221 1 133689999999999997665 99999
Q ss_pred cC-CCCCchhhhhHh----h--hh-c---C---CCHHHHHHhhhcCC
Q 026343 163 PA-CYYGHNEAEFGM----S--WC-A---G---FGGSFYNSYFEVMP 195 (240)
Q Consensus 163 ~~-~~~Gd~~~Dla~----~--~~-~---~---~~~~~~~~Y~~~~~ 195 (240)
|. +.+.+-..|.|. + +. + . +.++|++||.+...
T Consensus 135 fGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~~f~~gY~~~~~ 181 (204)
T COG3642 135 FGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFAAFLEGYREEFG 181 (204)
T ss_pred CCcccccccHHhhhchHHHHHHHHHhccccHHHHHHHHHHHHHHHhc
Confidence 84 667776666664 2 11 1 1 23689999987654
No 43
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.26 E-value=8.3e-10 Score=93.69 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhcCCCC-CccceeecccC-----CCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIR-APRPFKVGALP-----TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDN 76 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~-vP~v~~~~~~~-----~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~ 76 (240)
.....++..|++. |++ ||+++...... .|.+|+||+|++|..... ..+|+.||+||..+.. |......
T Consensus 45 ~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~ 118 (313)
T TIGR02905 45 AELMAMSDYLQQA-GDETVLELVKTKFGQSSALIDGVSYYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWK 118 (313)
T ss_pred HHHHHHHHHHHHc-CCCcccceeecCCCCEeEEECCEEEEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCccc
Confidence 3456778889886 786 99999876543 478999999998865322 4999999999998752 2211111
Q ss_pred ccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-CC----------hHHHHHHHHHHHHHhh-hhcC---CCCCccee
Q 026343 77 TIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD----------STIYQRGHRLMKNLAP-LFEG---VNVEPCLL 141 (240)
Q Consensus 77 ~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-~~----------~~~~~~~~~~~~~~~~-~l~~---~~~~p~lv 141 (240)
. .....|...|.....+ +........... .+ +.....+++.++.+.+ -+.+ ...+.++|
T Consensus 119 ~----~~~~~~~~~~~k~~~e--l~~~~~~~~~~~~~s~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~~~~~~lC 192 (313)
T TIGR02905 119 K----SRIGQWKELWAKRLDQ--LEDWWQSLLAQGPQTLFDEQFLETFPYYLGLTENAIQYAADTELDDEPGLADSGTIC 192 (313)
T ss_pred c----ccccccHHHHHHHHHH--HHHHHHHHHhcCCCChHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhccccCccc
Confidence 0 1112233333322211 222221111111 11 1112333334333321 1111 12466999
Q ss_pred ccCCCCCCeeecCCCCeEEEccCCCCCchhhhhHhh--h-h-c--C--C--CHHHHHHhhhcCCCCcCHHHHHHHHHHH
Q 026343 142 HGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS--W-C-A--G--F--GGSFYNSYFEVMPKQPGFEKRRDLYMLY 210 (240)
Q Consensus 142 HgDl~~~Nvlv~~~~~~~iiD~~~~~Gd~~~Dla~~--~-~-~--~--~--~~~~~~~Y~~~~~~~~~~~~r~~~y~l~ 210 (240)
|||+...|++ .+ +..++|+++..++.|..||+.+ . + - . + ...++++|.+..|++++..+-+-.+.++
T Consensus 193 H~d~~~hn~l-~~-~~~~~i~~d~~~D~~~~DL~~firk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~e~~~l~~~L~F 269 (313)
T TIGR02905 193 HERFGETTWL-ER-GGLIKPPTEWVYDHPARDLAEWIRERYMGEIRQNQRAIASFLQEYEQAAPLTPFSWRLMYARLLF 269 (313)
T ss_pred cCccCccccc-cC-CCeEecccccccccchhHHHHHHHHHHHHhccccHHHHHHHHHHhhhcCCCCHHHHHHHHHHHcC
Confidence 9999999987 44 4477888766699999999964 1 2 1 1 2 2579999999999987544444444444
No 44
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.16 E-value=3e-10 Score=89.80 Aligned_cols=122 Identities=19% Similarity=0.290 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 82 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~ 82 (240)
..|.++++.+... ++++|.++... ++..+++||+++|.++.. .+ .. ..
T Consensus 45 ~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv~e~~~g~~l~~-------~~---~~-~~----------------- 92 (199)
T TIGR03724 45 RNEARLLSRARKA-GVNTPVVYDVD---PDNKTIVMEYIEGKPLKD-------VI---EE-GN----------------- 92 (199)
T ss_pred HHHHHHHHHHHHC-CCCCCEEEEEE---CCCCEEEEEEECCccHHH-------HH---hh-cH-----------------
Confidence 5799999999875 68999998876 456799999999965311 11 00 00
Q ss_pred ccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 83 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 83 ~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
. .+. .++...+.. + ....++|||++|+||+++ ++...+||
T Consensus 93 -------~--------~~~-------------------~~i~~~l~~-l----H~~gi~H~Dl~~~Nil~~-~~~~~liD 132 (199)
T TIGR03724 93 -------D--------ELL-------------------REIGRLVGK-L----HKAGIVHGDLTTSNIIVR-DDKLYLID 132 (199)
T ss_pred -------H--------HHH-------------------HHHHHHHHH-H----HHCCeecCCCCcceEEEE-CCcEEEEE
Confidence 0 000 011111111 1 123589999999999998 56689999
Q ss_pred cC-CCCCchhhhhHhhh------hc----C----CCHHHHHHhhhcCCC
Q 026343 163 PA-CYYGHNEAEFGMSW------CA----G----FGGSFYNSYFEVMPK 196 (240)
Q Consensus 163 ~~-~~~Gd~~~Dla~~~------~~----~----~~~~~~~~Y~~~~~~ 196 (240)
|+ +..+++..|.+... .. . +.+.|+++|.+..+.
T Consensus 133 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~ 181 (199)
T TIGR03724 133 FGLGKYSDEIEDKAVDLHVLKRSLESTHPDKAEELFEAFLEGYREEFGE 181 (199)
T ss_pred CCCCcCCCcHHhhhchHHHHHHHHhhhCchhHHHHHHHHHHHHHhhccc
Confidence 84 56888888776421 11 1 124678888876543
No 45
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.01 E-value=1.5e-08 Score=83.92 Aligned_cols=60 Identities=18% Similarity=0.228 Sum_probs=45.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhhhh-cCCCH----HHHHHhhhcCCCC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFGG----SFYNSYFEVMPKQ 197 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~~-~~~~~----~~~~~Y~~~~~~~ 197 (240)
-++||+|++++|++.++.+...+|||+ +..+||++|||.+.. ..+.. ..+..|.+..+.+
T Consensus 153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~~~ 218 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYGFE 218 (269)
T ss_pred eeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCCch
Confidence 699999999999999885679999986 789999999998753 22322 3555566555443
No 46
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.97 E-value=5.2e-09 Score=83.52 Aligned_cols=41 Identities=29% Similarity=0.384 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCC---ceEEEEeeccCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTG---GSYIIMEFIEFG 44 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~---~~~~vme~l~G~ 44 (240)
.+|.+.+..|.+. ++|||+|++++....+ ..++++|+++|.
T Consensus 59 ~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~ 102 (206)
T PF06293_consen 59 KREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGA 102 (206)
T ss_pred HHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCc
Confidence 5799999999986 8999999999876422 568999999985
No 47
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.97 E-value=3.1e-09 Score=83.71 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
++|++.|+.+.+. ++|||+|+... ..+++||++.|.
T Consensus 74 ~kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~ 109 (197)
T cd05146 74 EKEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDD 109 (197)
T ss_pred HHHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCC
Confidence 4899999999997 79999999875 459999999885
No 48
>COG4857 Predicted kinase [General function prediction only]
Probab=98.96 E-value=4.5e-09 Score=85.65 Aligned_cols=160 Identities=21% Similarity=0.213 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeecc-----------CCCCCchHHHHHHHHHHHhhcCCCC--CCC
Q 026343 4 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE-----------FGSSRGNQSVFGKKLAEMHKAGKSS--KGF 70 (240)
Q Consensus 4 ~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~-----------G~~~~~~~~~lg~~La~lH~~~~~~--~~~ 70 (240)
-|+.+|..-+.+.|-.||++|.++ +....++||++. |..++.....+|..|++---.+..- ..+
T Consensus 83 iE~~aL~rq~~~aPh~VPeIyf~D---e~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k 159 (408)
T COG4857 83 IEYHALRRQNARAPHFVPEIYFFD---EIMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTK 159 (408)
T ss_pred HHHHHHHHhhccCCCCcceeEeec---chhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchH
Confidence 477888877777889999999998 458899999875 3333455677888887654433210 000
Q ss_pred -------CCCCCCccccccccCCCcccHHHHHHHh--hhH-HHHHHHHHhc-CChHHHHHHHHHHHHHhhhhcCCCCCcc
Q 026343 71 -------GFDVDNTIGSTPQINKWTSNWIEFYAEH--RLG-YQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPC 139 (240)
Q Consensus 71 -------g~~~~~~~g~~~~~~~~~~~w~~~~~~~--~l~-~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p~ 139 (240)
-|..+..|.-+- .-.+++ +||... |.. ++++...... .+..+.-.+.+ +++.+. ....+
T Consensus 160 ~kK~~vk~FtNpELCDItE-~LVFtd---Pyfd~d~Nr~~~~~l~~fVe~L~~n~dlkvea~k----Lk~~F~--~~aet 229 (408)
T COG4857 160 DKKADVKLFTNPELCDITE-NLVFTD---PYFDADRNRHTIPQLDPFVEELRKNRDLKVEAQK----LKHKFM--AYAET 229 (408)
T ss_pred hHHHHHHHhCCchhhcchh-ceeecC---ccccccccccccccchHHHHHHhcCcchhhhHHH----HHHHHH--HHhHH
Confidence 111222221110 000111 111100 000 1111111110 11111111112 333332 24668
Q ss_pred eeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhh
Q 026343 140 LLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 140 lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
|||||||.|.|++++. ++-||||. ++||+-.+|++++
T Consensus 230 LiHGDLHsGSIfvte~-etkvIDPEFaFYGPmafDiG~~ 267 (408)
T COG4857 230 LIHGDLHSGSIFVTEK-ETKVIDPEFAFYGPMAFDIGML 267 (408)
T ss_pred HhccccccCcEEeecC-cceeeCccccccCcchhhHHHH
Confidence 9999999999999754 58999985 7899999999975
No 49
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=9.2e-10 Score=86.28 Aligned_cols=38 Identities=26% Similarity=0.464 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeecc--CCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~--G~~ 45 (240)
.++|++.|..+.+. |++||+|+.... ..+|||||+ |.+
T Consensus 55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~~-----~~ivME~I~~~G~~ 94 (188)
T PF01163_consen 55 AKKEFRNLKRLYEA-GVPVPKPYDYNR-----NVIVMEYIGEDGVP 94 (188)
T ss_dssp HHHHHHHHHHCCCT-T-SS--EEEEET-----TEEEEE--EETTEE
T ss_pred HHHHHHHHHHHHHC-CccCCcEEEEeC-----CEEEEEecCCCccc
Confidence 36899999999987 799999998874 499999999 754
No 50
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.94 E-value=6.1e-09 Score=83.04 Aligned_cols=124 Identities=19% Similarity=0.282 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST 81 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~ 81 (240)
+..|++.+..+... ++++|.++... .+..+++||+++|.++.. .+. . ..
T Consensus 46 ~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv~e~~~G~~L~~-------~~~---~-~~---------------- 94 (211)
T PRK14879 46 TRREARIMSRARKA-GVNVPAVYFVD---PENFIIVMEYIEGEPLKD-------LIN---S-NG---------------- 94 (211)
T ss_pred HHHHHHHHHHHHHC-CCCCCeEEEEe---CCCCEEEEEEeCCcCHHH-------HHH---h-cc----------------
Confidence 35788999999864 69999998765 456799999999975421 110 0 00
Q ss_pred cccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEE
Q 026343 82 PQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL 161 (240)
Q Consensus 82 ~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~ii 161 (240)
+ ....+. ..+...+.. +. ...++|||++|+||+++ ++...||
T Consensus 95 ---------~----~~~~i~-------------------~~i~~~l~~-lH----~~~i~H~Dl~p~Nil~~-~~~~~li 136 (211)
T PRK14879 95 ---------M----EELELS-------------------REIGRLVGK-LH----SAGIIHGDLTTSNMILS-GGKIYLI 136 (211)
T ss_pred ---------H----HHHHHH-------------------HHHHHHHHH-HH----hCCcccCCCCcccEEEE-CCCEEEE
Confidence 0 000010 111111111 11 23589999999999998 5568899
Q ss_pred ccC-CCCCchhhhhHhhh--h--------cCC----CHHHHHHhhhcC
Q 026343 162 DPA-CYYGHNEAEFGMSW--C--------AGF----GGSFYNSYFEVM 194 (240)
Q Consensus 162 D~~-~~~Gd~~~Dla~~~--~--------~~~----~~~~~~~Y~~~~ 194 (240)
||. +.++++..|.+.-. + ..+ .+.|+++|....
T Consensus 137 Df~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gY~~~~ 184 (211)
T PRK14879 137 DFGLAEFSKDLEDRAVDLHVLLRSLESTHPDWAEELFEAFLEGYREVM 184 (211)
T ss_pred ECCcccCCCcHHhhhccHHHHHHHhhccCcchHHHHHHHHHHHHHHhh
Confidence 984 56888888777421 1 111 246788888654
No 51
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.91 E-value=3.2e-09 Score=86.43 Aligned_cols=102 Identities=22% Similarity=0.301 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 82 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~ 82 (240)
++|+++|..|.+. |++||+|+++. ++.++||+|+|.++.. +.- ..
T Consensus 157 ~rEf~~L~~L~~~-G~~VP~P~~~n-----RHaVvMe~ieG~eL~~-----------~r~-~~----------------- 201 (304)
T COG0478 157 EREFEALQRLYPE-GVKVPKPIAWN-----RHAVVMEYIEGVELYR-----------LRL-DV----------------- 201 (304)
T ss_pred HHHHHHHHHhhhc-CCCCCCccccc-----cceeeeehcccceeec-----------ccC-cc-----------------
Confidence 6899999999986 79999999987 4699999999976411 100 00
Q ss_pred ccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 83 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 83 ~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
.+ .. +....+++.+.... +-++|||||..=||+|++||...|||
T Consensus 202 -------en--------~~----------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vID 245 (304)
T COG0478 202 -------EN--------PD----------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVID 245 (304)
T ss_pred -------cC--------HH----------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEe
Confidence 00 00 11122333333332 33689999999999999998899999
Q ss_pred c-CC-CCCchhhhhH
Q 026343 163 P-AC-YYGHNEAEFG 175 (240)
Q Consensus 163 ~-~~-~~Gd~~~Dla 175 (240)
| .+ ..++|..+.-
T Consensus 246 wPQ~v~~~hp~a~e~ 260 (304)
T COG0478 246 WPQAVPISHPDAEEL 260 (304)
T ss_pred CcccccCCCCCHHHH
Confidence 6 44 4777765544
No 52
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=98.90 E-value=1.1e-08 Score=83.90 Aligned_cols=153 Identities=17% Similarity=0.187 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
+.|....+.|+.+ --.|++|+.-.. .+++|||+|..+. +.+..+++.||+||++-.+
T Consensus 126 e~Ev~afk~L~a~--G~ap~Ly~tF~N-----GLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~--------- 189 (391)
T KOG4720|consen 126 ENEVIAFKLLAAY--GFAPKLYGTFNN-----GLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT--------- 189 (391)
T ss_pred HHHHHHHHHHHHc--CcChhhhheecC-----ceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC---------
Confidence 4677778888876 346778876532 6999999999874 4679999999999998652
Q ss_pred CccccccccCCCcccHHHHHHHhhhHH-HHHHHHHhc-CChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeec
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGY-QLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD 153 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~ 153 (240)
|..|...-|.+ ...|+.. +.. ..+....+. .+..-.+.+.+-...+.+.+.....+-|+||.||-.+||+.+
T Consensus 190 ---g~~pkp~lw~k-m~~f~~l--v~~~f~de~~kq~~~~~~~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~ 263 (391)
T KOG4720|consen 190 ---GGNPKPPLWEK-MRKFLQL--VPTSFEDEINKQNLFDEPSPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYD 263 (391)
T ss_pred ---CCCCCCcHHHH-HHHHHHh--cCchhhcccchhhcccCCCHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeec
Confidence 11222222221 1222221 000 000100111 110001222222233444554445677999999999999998
Q ss_pred CCC-CeEEEccC-CCCCchhhhhHhh
Q 026343 154 KNG-EPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 154 ~~~-~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
+.. .+-+||.. +.+...++|++--
T Consensus 264 ~~~~~v~fIDYEYa~yNY~afDIgNH 289 (391)
T KOG4720|consen 264 SEKGSVEFIDYEYAGYNYQAFDIGNH 289 (391)
T ss_pred cccCcEEEEeecccccchhheehhhh
Confidence 764 35699964 7899999999953
No 53
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.87 E-value=1e-08 Score=82.68 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~-----~~~~~~vme~l~G~~~ 46 (240)
+++|+..+..+.+. ++++|..+...... ++..+++|||++|.++
T Consensus 82 ~e~Ea~~l~rL~~~-GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL 130 (232)
T PRK10359 82 YENLIVQTDRVRSE-GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVEL 130 (232)
T ss_pred HHHHHHHHHHHHHC-CCCcceEeeeecccccccccCCeEEEEEEECCccH
Confidence 67899999999765 89999888654321 3578999999999753
No 54
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.85 E-value=1.1e-08 Score=93.01 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=44.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-CCCCchhhhhHhhh------hcC-------CCHHHHHHhhhcCCCCcCHHHH
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW------CAG-------FGGSFYNSYFEVMPKQPGFEKR 203 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~~~Dla~~~------~~~-------~~~~~~~~Y~~~~~~~~~~~~r 203 (240)
.++|||++|+|||++ ++...||||. +..+++..|++... +.+ +.+.|+++|... +..+++.++
T Consensus 448 giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~~~~fl~gY~~~-~~~~~~~~~ 524 (535)
T PRK09605 448 GIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEELWEAFLEGYRET-EGAEDVLER 524 (535)
T ss_pred CCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHHHHHHHHhhccC-ccHHHHHHH
Confidence 589999999999994 4568899984 67899999988632 111 125799999866 333444333
No 55
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.85 E-value=2.9e-08 Score=82.20 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC-C---CceEEEEeeccCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP-T---GGSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~-~---~~~~~vme~l~G~ 44 (240)
..+|++.+..|.+. ++|||+|++++... . ...++|||+++|.
T Consensus 75 a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~ 120 (268)
T PRK15123 75 ADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITEDLAPT 120 (268)
T ss_pred HHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEeeCCCC
Confidence 35899999999987 89999998887542 1 3589999999985
No 56
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.84 E-value=1.3e-08 Score=80.63 Aligned_cols=57 Identities=23% Similarity=0.386 Sum_probs=43.2
Q ss_pred CCcceeccCCCCCCeeecCCC-----CeEEEcc-CCCCCchhhhhHhhhhcCC--------CHHHHHHhhh
Q 026343 136 VEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSWCAGF--------GGSFYNSYFE 192 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~-----~~~iiD~-~~~~Gd~~~Dla~~~~~~~--------~~~~~~~Y~~ 192 (240)
...|++|||+|++|||+..++ ...+||| .+.+|+|.+||+.+.+... .+.+++.|.+
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~ 188 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYE 188 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999997543 4789998 5789999999997632211 2456777764
No 57
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.83 E-value=3.9e-08 Score=80.29 Aligned_cols=42 Identities=29% Similarity=0.365 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCC---ceEEEEeeccCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTG---GSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~---~~~~vme~l~G~ 44 (240)
+.+|++.+..|.+. +++||+++.......+ ..++|||+++|.
T Consensus 87 ~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~ 131 (239)
T PRK01723 87 AFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYRADILIERIEGA 131 (239)
T ss_pred HHHHHHHHHHHHhC-CCCCceeEeeeeeecCcceeeeEEEEecCCC
Confidence 35699999999876 7999999987544222 456999999984
No 58
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.77 E-value=3.4e-08 Score=76.10 Aligned_cols=39 Identities=36% Similarity=0.337 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
..|++.|..+... ++++|++|..+. ....+.|||++|.+
T Consensus 58 ~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~i~ME~~~g~~ 96 (229)
T KOG3087|consen 58 KQEARLLAKCRAL-GIPAPRLIFIDT---YGGQIYMEFIDGAS 96 (229)
T ss_pred HHHHHHHHHHHHh-CCCCceEEEEec---CCCeEEEEeccchh
Confidence 4799999999876 899999999984 57899999999953
No 59
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.66 E-value=8.6e-07 Score=79.71 Aligned_cols=160 Identities=15% Similarity=0.161 Sum_probs=88.3
Q ss_pred HHHHHHHHHhcCCCCCccceeeccc--CCC---ceEEEEeeccCCCC---------C-----------------------
Q 026343 5 EALGLGAMYETRTIRAPRPFKVGAL--PTG---GSYIIMEFIEFGSS---------R----------------------- 47 (240)
Q Consensus 5 E~~~L~~l~~~~~v~vP~v~~~~~~--~~~---~~~~vme~l~G~~~---------~----------------------- 47 (240)
|.++.++|.+..--.||.++++-.. +++ .-.++.+||++..- .
T Consensus 203 e~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~ 282 (528)
T TIGR02457 203 EIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAG 282 (528)
T ss_pred chHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhh
Confidence 7788999998644579999987543 123 34566699987631 0
Q ss_pred --chHHHHHHHHHHHhhcCCCC---CCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHh--cCChHHHHHH
Q 026343 48 --GNQSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIYQRG 120 (240)
Q Consensus 48 --~~~~~lg~~La~lH~~~~~~---~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~ 120 (240)
..+..||+.+|.||..-... +.|+. -|.......+|...... ++...++...+. .++.+.++.+
T Consensus 283 ~~~~a~~LG~rtAemH~aLA~~~~~~aF~p--------ep~~~~~~~~~~~~~~~-~~~~a~~~L~~~~~~l~~~~~~~~ 353 (528)
T TIGR02457 283 YLEFAGLLGRRLAELHLALAAGGEDPAFAP--------EPISTLYQRSWYQDMRA-QAERALQLLAQSRDGLPAAARALA 353 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--------CCCCHHHHHHHHHHHHH-HHHHHHHHHHhhhccCChhHHHHH
Confidence 01567999999999853321 12331 11111112344333322 232223322221 1233322222
Q ss_pred -------HHHHHHHhhhhcCCCCCcce---eccCCCCCCeeecCCCCeEEEccCCC----C------CchhhhhHh
Q 026343 121 -------HRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISSDKNGEPVILDPACY----Y------GHNEAEFGM 176 (240)
Q Consensus 121 -------~~~~~~~~~~l~~~~~~p~l---vHgDl~~~Nvlv~~~~~~~iiD~~~~----~------Gd~~~Dla~ 176 (240)
+++.+++..+.. ...+++ ||||+|.||||+.+++ ..||||++- . -.|.-|+|-
T Consensus 354 ~~l~~~~~~l~~~~~~l~~--~~~~~~k~RiHGD~HLgqvL~t~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAG 426 (528)
T TIGR02457 354 DRLLAQRKELAAHLRPLVK--REIDGLKIRIHGDFHLGQVLVVQDD-AVLIDFEGEPARPLAERRAKRSPLRDVAG 426 (528)
T ss_pred HHHHHHHHHHHHHHHHHhh--cCCCcceEeEecCcchhcEEEeCCC-eEEEcCCCCCCCChHHhccCCChHHHHHH
Confidence 233333333332 133456 9999999999998765 679997431 2 248889994
No 60
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.64 E-value=1.1e-07 Score=85.33 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHhc----CCCCCccceeecccCCCceEEEEeeccCCCCC
Q 026343 2 FEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR 47 (240)
Q Consensus 2 ~~~E~~~L~~l~~~----~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~ 47 (240)
|..|+..+..+++. ..+.||+||.-. .+...++|||++|.+++
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~---t~~~VLtmE~i~Gi~i~ 254 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEY---TTRRVLTMEWIDGIKIS 254 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhc---cCCcEEEEEeeCCEecc
Confidence 67899999998874 478899999866 35679999999998753
No 61
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.64 E-value=1.2e-07 Score=75.24 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+++|+++|+.|.+ ...+|+++.+. ..+++|+|++|.+
T Consensus 48 ~~rE~~iL~~L~~--~~~vP~ll~~~-----~~~lvmeyI~G~~ 84 (218)
T PRK12274 48 ARREALALRQLDG--LPRTPRLLHWD-----GRHLDRSYLAGAA 84 (218)
T ss_pred HHHHHHHHHhcCC--CCCCCEEEEEc-----CEEEEEeeecCcc
Confidence 6789999999976 36689999874 3599999999975
No 62
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.59 E-value=2.7e-07 Score=74.52 Aligned_cols=36 Identities=31% Similarity=0.461 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
++|++.|+.+.+. ||+||+|+..... .+|||||...
T Consensus 116 ~kEf~NL~R~~eA-GVrvP~Pi~~~~n-----VLvMEfIg~~ 151 (268)
T COG1718 116 RKEFRNLKRAYEA-GVRVPEPIAFRNN-----VLVMEFIGDD 151 (268)
T ss_pred HHHHHHHHHHHHc-CCCCCCceeecCC-----eEEEEeccCC
Confidence 6899999999997 7999999999854 9999999764
No 63
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.56 E-value=6.8e-07 Score=70.35 Aligned_cols=37 Identities=30% Similarity=0.495 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+.|++.+..+... ++++|+++.... .|++|||++|..
T Consensus 67 ~~E~~~l~~l~~~-~i~~p~~~~~~~-----~~lVmE~~~g~~ 103 (190)
T cd05145 67 EKEFRNLKRLYEA-GVPVPEPILLKK-----NVLVMEFIGDDG 103 (190)
T ss_pred HHHHHHHHHHHhC-CCCCceEEEecC-----CEEEEEEecCCC
Confidence 5789999999875 789999887642 499999999863
No 64
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.49 E-value=1.8e-07 Score=78.32 Aligned_cols=98 Identities=23% Similarity=0.346 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 82 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~ 82 (240)
.+|++.|++|.++ ++|||+|+... ++++|||.|+|-|+ .++|.+..++
T Consensus 158 ~kEfafmkaL~e~-gfpVPkpiD~~-----RH~Vvmelv~g~Pl-----------~~v~~v~d~~--------------- 205 (465)
T KOG2268|consen 158 TKEFAFMKALYER-GFPVPKPIDHN-----RHCVVMELVDGYPL-----------RQVRHVEDPP--------------- 205 (465)
T ss_pred HHHHHHHHHHHHc-CCCCCCccccc-----ceeeHHHhhcccce-----------eeeeecCChH---------------
Confidence 4799999999998 79999999886 46999999999763 3344433210
Q ss_pred ccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 83 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 83 ~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
.+.+ .+...+.++. .-++|||||--=|||+++++...+||
T Consensus 206 --------------------------------~ly~---~lm~~Iv~la-----~~GlIHgDFNEFNimv~dd~~i~vID 245 (465)
T KOG2268|consen 206 --------------------------------TLYD---DLMGLIVRLA-----NHGLIHGDFNEFNIMVKDDDKIVVID 245 (465)
T ss_pred --------------------------------HHHH---HHHHHHHHHH-----HcCceecccchheeEEecCCCEEEee
Confidence 0011 1122222222 33799999999999999777799999
Q ss_pred c--CCCCCchhh
Q 026343 163 P--ACYYGHNEA 172 (240)
Q Consensus 163 ~--~~~~Gd~~~ 172 (240)
| +....||-.
T Consensus 246 FPQmvS~sh~nA 257 (465)
T KOG2268|consen 246 FPQMVSTSHPNA 257 (465)
T ss_pred chHhhccCCCcc
Confidence 4 334555443
No 65
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.46 E-value=9.5e-07 Score=69.58 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+.|++.|..+... ++++|.++... ..++||||++|..
T Consensus 67 ~~E~~~l~~l~~~-~v~~p~~~~~~-----~~~iVmE~i~g~~ 103 (190)
T cd05147 67 EKEMRNLKRLVTA-GIPCPEPILLK-----SHVLVMEFIGDDG 103 (190)
T ss_pred HHHHHHHHHHHHC-CCCCCcEEEec-----CCEEEEEEeCCCC
Confidence 3499999999875 67888877543 2499999999954
No 66
>PRK09902 hypothetical protein; Provisional
Probab=98.46 E-value=3.2e-06 Score=67.17 Aligned_cols=42 Identities=10% Similarity=-0.031 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCC---CceEEEEeeccCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~---~~~~~vme~l~G~ 44 (240)
|.+|...|+.|++. ++|||+|+..+..+. -..++|.|.|+|.
T Consensus 66 f~rE~~~L~~L~~~-GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~ 110 (216)
T PRK09902 66 IVREVAVIKELERA-GVIVPKIVFGEAVKIEGEWRALLVTEDMAGF 110 (216)
T ss_pred HHHHHHHHHHHHHc-CCCCCccceeeeeccCCceEEEEEEEeCCCC
Confidence 57899999999997 899999997664432 2689999999985
No 67
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.43 E-value=1e-06 Score=78.16 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhc----CCCCCccceeecccCCCceEEEEeeccCCCCCc
Q 026343 2 FEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG 48 (240)
Q Consensus 2 ~~~E~~~L~~l~~~----~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~ 48 (240)
|..|++.+..+++. ..+.||+++... ++..+++|||++|.++..
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~~ 247 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDR---TSERVLTMEWIDGIPLSD 247 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhh---cCCceEEEEeECCccccc
Confidence 56789999888753 468899998654 356799999999987643
No 68
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.43 E-value=8.3e-07 Score=80.16 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhc----CCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~----~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
|..|++.+..+++. ..+.||+||... ++..+++|||++|.++
T Consensus 203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l 248 (537)
T PRK04750 203 LMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPV 248 (537)
T ss_pred HHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccH
Confidence 56788888888753 357899999765 4578999999999875
No 69
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.43 E-value=5.9e-06 Score=64.80 Aligned_cols=49 Identities=27% Similarity=0.489 Sum_probs=40.0
Q ss_pred hhcCCCCCcceeccCCCCCCeeecCCCCeEEEccCCCCCchhhhhHhhhh
Q 026343 130 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 179 (240)
Q Consensus 130 ~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~Gd~~~Dla~~~~ 179 (240)
+++. +..++.+|||+|-+|||-.+.+...+||+...+|++.+|.|.+.|
T Consensus 154 LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~ 202 (274)
T COG3570 154 LLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC 202 (274)
T ss_pred HhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence 4443 456788999999999997555468899999999999999998755
No 70
>smart00090 RIO RIO-like kinase.
Probab=98.39 E-value=1.9e-06 Score=70.33 Aligned_cols=39 Identities=28% Similarity=0.420 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
++.|++.|..+... ++.+|+++... ..++|||+++|..+
T Consensus 97 ~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L 135 (237)
T smart00090 97 AEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL 135 (237)
T ss_pred HHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence 35799999999874 68999999764 34899999999654
No 71
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.36 E-value=3.4e-06 Score=66.67 Aligned_cols=38 Identities=26% Similarity=0.431 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
..|...+..+... ++++|+++... ..+++|||++|.++
T Consensus 81 ~~E~~~l~~l~~~-~i~v~~~~~~~-----~~~lv~e~~~g~~L 118 (198)
T cd05144 81 QKEFAALKALYEE-GFPVPKPIDWN-----RHAVVMEYIDGVEL 118 (198)
T ss_pred HHHHHHHHHHHHc-CCCCCceeecC-----CceEEEEEeCCcch
Confidence 5688889888765 57899998654 34999999999653
No 72
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.31 E-value=3e-06 Score=76.10 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHh----cC---CCCCccceeecccCCCceEEEEeeccCCCCCc
Q 026343 2 FEGEALGLGAMYE----TR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG 48 (240)
Q Consensus 2 ~~~E~~~L~~l~~----~~---~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~ 48 (240)
|..|++..+..++ .. .|.||+||... .....++|||++|.++++
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~---st~RVLtME~~~G~~i~D 291 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL---STKRVLTMEYVDGIKIND 291 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhc---CcceEEEEEecCCccCCC
Confidence 4567766665554 22 57799999987 357899999999987654
No 73
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.30 E-value=5e-06 Score=68.10 Aligned_cols=80 Identities=21% Similarity=0.187 Sum_probs=60.5
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEc---cC-C-CCCchhhhhHhh-h---hcC---CCHHHHHHhhhcCCCCcCHHHH
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILD---PA-C-YYGHNEAEFGMS-W---CAG---FGGSFYNSYFEVMPKQPGFEKR 203 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD---~~-~-~~Gd~~~Dla~~-~---~~~---~~~~~~~~Y~~~~~~~~~~~~r 203 (240)
..-.=||||||.+||.+-+ +.+.++| |+ . .+.|-.+|+|.+ + +.+ +...|+++|.+...- .+....
T Consensus 207 g~IRecHGDLhl~ni~l~d-g~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~~~ln~Yl~~tgD-~~gl~l 284 (337)
T COG2187 207 GFIRECHGDLHLRNICLWD-GEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLARRFLNTYLEETGD-WDGLEL 284 (337)
T ss_pred CCceecccchhhcceeeec-CcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHHHHHHHHHHHhCC-ccHHHH
Confidence 3446699999999998854 5699999 64 4 499999999975 2 333 347899999988643 334688
Q ss_pred HHHHHHHHHHHHHH
Q 026343 204 RDLYMLYHYLNHYN 217 (240)
Q Consensus 204 ~~~y~l~~~l~~~~ 217 (240)
+++|.-+++.+.+-
T Consensus 285 Lpfyla~rA~VRak 298 (337)
T COG2187 285 LPFYLAYRAYVRAK 298 (337)
T ss_pred hHHHHHHHHHHHHh
Confidence 99998888876653
No 74
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.12 E-value=1.8e-05 Score=63.27 Aligned_cols=25 Identities=36% Similarity=0.553 Sum_probs=21.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
++.|||+||+|+++++++ ..+||+.
T Consensus 155 G~~HGD~hpgNFlv~~~~-i~iID~~ 179 (229)
T PF06176_consen 155 GFYHGDPHPGNFLVSNNG-IRIIDTQ 179 (229)
T ss_pred CCccCCCCcCcEEEECCc-EEEEECc
Confidence 689999999999998665 8899963
No 75
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.11 E-value=2.6e-05 Score=60.75 Aligned_cols=37 Identities=30% Similarity=0.535 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+.|.+.+..+.+. ++.+|+++.... .+++|||++|..
T Consensus 65 ~~e~~~l~~l~~~-~~~~~~~~~~~~-----~~lv~e~~~g~~ 101 (187)
T cd05119 65 EKEFRNLKRLYEA-GVPVPKPIDLNR-----HVLVMEFIGGDG 101 (187)
T ss_pred HHHHHHHHHHHHc-CCCCCceEecCC-----CEEEEEEeCCCC
Confidence 4678888888875 689999998653 499999999964
No 76
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.08 E-value=1.4e-05 Score=69.05 Aligned_cols=38 Identities=13% Similarity=0.033 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
+.+|+++|+.|+.. --||+++..+ ..|++|||++|.++
T Consensus 68 ~~~E~~iL~~L~h~--~iv~~l~~~~-----~~~LVmE~~~G~~L 105 (365)
T PRK09188 68 AAREIRALKTVRGI--GVVPQLLATG-----KDGLVRGWTEGVPL 105 (365)
T ss_pred HHHHHHHHHhccCC--CCCcEEEEcC-----CcEEEEEccCCCCH
Confidence 67899999999764 3366666543 46999999999753
No 77
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=98.03 E-value=0.0001 Score=62.66 Aligned_cols=145 Identities=22% Similarity=0.144 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-------chHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD 75 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~ 75 (240)
..|..++..++++ -.-|+.++.-.. | =+=+||+-++++ .....+|+.++++|....+.+
T Consensus 90 ~~Esv~fa~lSer--~lGPkL~G~F~~--G---R~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~------- 155 (366)
T KOG2686|consen 90 ETESVMFAILSER--GLGPKLYGFFSG--G---RFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGP------- 155 (366)
T ss_pred hhHHHHHHHHhhc--CCCcceeeecCC--c---cHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCC-------
Confidence 4677788888876 456888876642 2 234566655443 446889999999999876421
Q ss_pred CccccccccCCCcccHHHHHHHhhhHHHHHHHHHh---------cCCh-HHHHHHHHHHHHHhhhhcCCCCCcceeccCC
Q 026343 76 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ---------YGDS-TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 145 (240)
Q Consensus 76 ~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~---------~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl 145 (240)
... ...|. ++..++..+.+- +.+. +.... ..-...+.++......+-|+||.|+
T Consensus 156 -------ke~--~~~~~------~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~l-~~e~~~~~~~~e~~~~~vvFcHNDl 219 (366)
T KOG2686|consen 156 -------KEP--RSLWE------RYKKWLKGAKKIKPTEVSYSCGPDKLEIEDL-LLELSLFRKWSELTKSPVVFCHNDL 219 (366)
T ss_pred -------ccH--HHHHH------HHHHHHhhhhhcCCCccchhcccchhhHHHH-HHHHHHHHHHHhcCCCCeeeecccc
Confidence 000 01221 122222222111 1110 11111 1111222233311134579999999
Q ss_pred CCCCeeecCC-CCeEEEccC-CCCCchhhhhHhh
Q 026343 146 WSGNISSDKN-GEPVILDPA-CYYGHNEAEFGMS 177 (240)
Q Consensus 146 ~~~Nvlv~~~-~~~~iiD~~-~~~Gd~~~Dla~~ 177 (240)
..||||..+. +..++||+. +.+-++.+|+|.-
T Consensus 220 q~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlanH 253 (366)
T KOG2686|consen 220 QYGNILLLNSTKELVLIDFEYASYNPRGFDLANH 253 (366)
T ss_pred cccceeeecCCCceeEEeeccccCCchhhhHHHH
Confidence 9999999754 357899985 7899999999963
No 78
>PRK14705 glycogen branching enzyme; Provisional
Probab=97.99 E-value=0.00033 Score=68.70 Aligned_cols=215 Identities=16% Similarity=0.037 Sum_probs=117.3
Q ss_pred HHHHHHHHHhcCCCCCccceeeccc--------CCC-------ceEEEEeeccCCCC------C---------chHHHHH
Q 026343 5 EALGLGAMYETRTIRAPRPFKVGAL--------PTG-------GSYIIMEFIEFGSS------R---------GNQSVFG 54 (240)
Q Consensus 5 E~~~L~~l~~~~~v~vP~v~~~~~~--------~~~-------~~~~vme~l~G~~~------~---------~~~~~lg 54 (240)
|.++.++|.+..--.||.++++-.. ..+ .-.++.+|+++..- + ..++.||
T Consensus 185 dvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG 264 (1224)
T PRK14705 185 EVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTGELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALG 264 (1224)
T ss_pred cHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCceeHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHH
Confidence 7888999998644579999987432 111 23677799987541 0 2357899
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCC
Q 026343 55 KKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGV 134 (240)
Q Consensus 55 ~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (240)
+.+|.||..-... .+- +.. . ....+ +.. .+...++.... ..++++....+.+.+++..+....
T Consensus 265 ~rtAemH~aLA~~--~~~--~~f------~--~~~~~---~~~-~~~~rL~~~~~-~~~~~~~~~~~~l~~~~~~l~~~~ 327 (1224)
T PRK14705 265 AATATVHRRLAET--LGT--HDG------Q--EQGPD---IAA-GVARRVRGSWA-EAGPAVGPYDHALDELLSALDGRN 327 (1224)
T ss_pred HHHHHHHHHHhcC--CCC--ccc------c--cCHHH---HHH-HHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHhccC
Confidence 9999999854321 110 000 0 00000 000 01111211111 123333344344555444433211
Q ss_pred CCCcceeccCCCCCCeeecCCC-----CeEEEccCCC----------CCchhhhhHh-h-hh--c------C--------
Q 026343 135 NVEPCLLHGDLWSGNISSDKNG-----EPVILDPACY----------YGHNEAEFGM-S-WC--A------G-------- 181 (240)
Q Consensus 135 ~~~p~lvHgDl~~~Nvlv~~~~-----~~~iiD~~~~----------~Gd~~~Dla~-~-~~--~------~-------- 181 (240)
...-.=||||||.|.||+.++. ...||||+.- --.|.-|+|- + +| . .
T Consensus 328 ~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~ERR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~ 407 (1224)
T PRK14705 328 AGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPIDERNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPE 407 (1224)
T ss_pred ccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChhhhccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 1234679999999999997432 3789996421 2348899994 4 22 1 0
Q ss_pred -C----CHHHHHHhhhcC-CCCcCHHHHHHHHHHHHHH---HHHHhhCCCcHHHHHHHHHHHHH
Q 026343 182 -F----GGSFYNSYFEVM-PKQPGFEKRRDLYMLYHYL---NHYNLFGSGYRSSALSIIDDYLR 236 (240)
Q Consensus 182 -~----~~~~~~~Y~~~~-~~~~~~~~r~~~y~l~~~l---~~~~~~g~~~~~~~~~~~~~~~~ 236 (240)
| .++|+++|.+.. ..++.....+.+|.|=+++ .--....+.|...-.+.+.+++.
T Consensus 408 ~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~YE~~nRP~Wv~IPL~gi~rll~ 471 (1224)
T PRK14705 408 SWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVYELRNRPDWLSIPVNASRRLLD 471 (1224)
T ss_pred HHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCcchHhHHHHHHHHHh
Confidence 1 146999999875 3333333344555443332 11234467888887777777775
No 79
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00079 Score=56.83 Aligned_cols=174 Identities=18% Similarity=0.239 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhhcCCCC---CCCCCCCCCccccccccCCCcccHHHHHHHhhhHHHHHHHHHhc-CC----hHHHHHHH
Q 026343 50 QSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD----STIYQRGH 121 (240)
Q Consensus 50 ~~~lg~~La~lH~~~~~~---~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~-~~----~~~~~~~~ 121 (240)
+..+|..++.+|+.-.+. +.||-..+ ...-.-|.. |+...++.+.+.. .+ +.+.+...
T Consensus 201 a~alG~av~~vHsaLA~~sddpafg~e~~---------ea~v~~w~~-----Rla~rls~~~d~l~~p~~ea~~l~~~~~ 266 (438)
T COG3281 201 AGALGEAVAEVHSALASCSDDPAFGEETD---------EATVEAWAD-----RLAERLSEAEDLLRGPAAEAPELLEYAP 266 (438)
T ss_pred HHHHHHHHHHHHHHHhCCccCccCCCccc---------cchHHHHHH-----HHHHHHHHHHhhhhchHHHHHHHHHhhH
Confidence 578999999999965431 22441110 000123333 3444444443221 11 12333333
Q ss_pred HHHHHHhhhhcCC-CCCcceeccCCCCCCeeecCCCCeEEEccCCC----------CCchhhhhHhh--hh----c----
Q 026343 122 RLMKNLAPLFEGV-NVEPCLLHGDLWSGNISSDKNGEPVILDPACY----------YGHNEAEFGMS--WC----A---- 180 (240)
Q Consensus 122 ~~~~~~~~~l~~~-~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~----------~Gd~~~Dla~~--~~----~---- 180 (240)
.+.+..++..... ..--.-||||||.|.||+.+ +...+|||..- --.|+-|++-+ ++ .
T Consensus 267 Al~q~~q~la~~algg~l~RvHGDLHLgQVLvt~-g~~~liDFEGEPsRpl~err~~~sPlrDvAgllRS~DYAa~~~~q 345 (438)
T COG3281 267 ALLQLFQKLAREALGGVLQRVHGDLHLGQVLVTP-GRALLIDFEGEPSRPLDERRAPDSPLRDVAGLLRSFDYAAYGPLQ 345 (438)
T ss_pred HHHHHHHHHHHhhhhhHHHHHhccceehheeeeC-CcEEEEecCCCCCCChhhccCCCCchHHHHHHHHHhHHHHHHhhh
Confidence 4444433332210 01123489999999999988 45899996432 33589999954 22 0
Q ss_pred C------------------C----CHHHHHHhhhcCCCC----cCHHHHHHHHHHHHHHH---HHHhhCCCcHHH----H
Q 026343 181 G------------------F----GGSFYNSYFEVMPKQ----PGFEKRRDLYMLYHYLN---HYNLFGSGYRSS----A 227 (240)
Q Consensus 181 ~------------------~----~~~~~~~Y~~~~~~~----~~~~~r~~~y~l~~~l~---~~~~~g~~~~~~----~ 227 (240)
+ | .+.|+++|....... ++..+++.+|.|=+..- -=......|.+. .
T Consensus 346 ~~~~~~e~a~e~~~~~~~~w~~as~~~fl~gY~aa~~~~g~~~e~s~~lL~~~lLeKAaYEv~YE~~~Rp~wl~IPl~~l 425 (438)
T COG3281 346 ALGRTDEAADEQRRGEARRWVEASRAAFLDGYAAASSIDGLPGEDSAELLAAYLLEKAAYEVGYEARYRPGWLPIPLAAL 425 (438)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccHHHHHHHHHHHHHHHHHHHhhccCCCceeccHHHH
Confidence 0 1 147999999654322 34477888887644321 112334555543 3
Q ss_pred HHHHHHHHHHh
Q 026343 228 LSIIDDYLRML 238 (240)
Q Consensus 228 ~~~~~~~~~~~ 238 (240)
.++++.+|.++
T Consensus 426 arl~e~lL~~~ 436 (438)
T COG3281 426 ARLTESLLDWL 436 (438)
T ss_pred HHHHHhhcccc
Confidence 45555555443
No 80
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.64 E-value=0.00016 Score=65.56 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=26.3
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
.-++||+|++|+|||+|.+|-+-+-||.-+.|
T Consensus 747 kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 747 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred hccceecccCccceEEccCCceeeeecccccc
Confidence 45799999999999999998888999753333
No 81
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=97.60 E-value=0.00049 Score=61.11 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 82 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~ 82 (240)
..|..+|..|.++. -+=++|..-+. +..-|+|+|+.++.. .|..|+.... |
T Consensus 121 ~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~A~nGd----------ll~~i~K~Gs----f------------ 171 (604)
T KOG0592|consen 121 TREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEYAPNGD----------LLDLIKKYGS----F------------ 171 (604)
T ss_pred hHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEecCCCc----------HHHHHHHhCc----c------------
Confidence 57899999998642 23345554443 568899999999853 5556665432 1
Q ss_pred ccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 83 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 83 ~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
...|.-||.. ++++.+. ++. .-++||+|++|+|||+++|+.+-|-|
T Consensus 172 -----de~caR~YAA------------------------eIldAle-ylH----~~GIIHRDlKPENILLd~dmhikITD 217 (604)
T KOG0592|consen 172 -----DETCARFYAA------------------------EILDALE-YLH----SNGIIHRDLKPENILLDKDGHIKITD 217 (604)
T ss_pred -----hHHHHHHHHH------------------------HHHHHHH-HHH----hcCceeccCChhheeEcCCCcEEEee
Confidence 1233333322 2222222 332 23789999999999999998888889
Q ss_pred cC
Q 026343 163 PA 164 (240)
Q Consensus 163 ~~ 164 (240)
|.
T Consensus 218 FG 219 (604)
T KOG0592|consen 218 FG 219 (604)
T ss_pred cc
Confidence 74
No 82
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.58 E-value=0.00026 Score=60.68 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
+.|.+.|+.|+.. ++|||+|+.... +.+||+||.+.
T Consensus 214 EKE~RNLkRl~~a-GIP~PePIlLk~-----hVLVM~FlGrd 249 (520)
T KOG2270|consen 214 EKEMRNLKRLNNA-GIPCPEPILLKN-----HVLVMEFLGRD 249 (520)
T ss_pred HHHHHHHHHHHhc-CCCCCCceeeec-----ceEeeeeccCC
Confidence 6899999999987 799999999874 59999999653
No 83
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=97.57 E-value=0.00029 Score=62.33 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|+|+|++..|-.-+-||.
T Consensus 261 gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 261 GYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred CcccccCChhheeecCCCCEeecccc
Confidence 68999999999999988877888874
No 84
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.51 E-value=0.00028 Score=63.41 Aligned_cols=41 Identities=20% Similarity=0.073 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
++.|+++|+.+.. -.+++++..... .+..|+||||++|.++
T Consensus 112 ~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~~gg~L 152 (478)
T PTZ00267 112 ARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYGSGGDL 152 (478)
T ss_pred HHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECCCCCCH
Confidence 3567777776643 346777776654 6789999999999754
No 85
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.44 E-value=0.00035 Score=60.11 Aligned_cols=26 Identities=19% Similarity=0.237 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...|+|+.
T Consensus 188 ~ivHrDlkp~NIll~~~~~~kL~DfG 213 (353)
T PLN00034 188 HIVHRDIKPSNLLINSAKNVKIADFG 213 (353)
T ss_pred CEeecCCCHHHEEEcCCCCEEEcccc
Confidence 58999999999999988778899964
No 86
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.41 E-value=0.00059 Score=58.78 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+.|.++|..+.. -..|.+|+.-+. +...|++|||++|..
T Consensus 125 ~tE~eIL~~lDH---PFlPTLYa~fet-~~~~cl~meyCpGGd 163 (459)
T KOG0610|consen 125 QTEREILSLLDH---PFLPTLYASFET-DKYSCLVMEYCPGGD 163 (459)
T ss_pred HHHHHHHHhcCC---Cccchhhheeec-cceeEEEEecCCCcc
Confidence 568888888764 457899988765 678999999999975
No 87
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.35 E-value=0.00062 Score=52.74 Aligned_cols=40 Identities=23% Similarity=0.179 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+.+|.+.++.+.. ..+|+++..... .+..+++||+++|.+
T Consensus 38 ~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~~ 77 (215)
T cd00180 38 LLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGGS 77 (215)
T ss_pred HHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCCc
Confidence 4678888888765 567778877765 478899999999854
No 88
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.35 E-value=0.00074 Score=57.55 Aligned_cols=27 Identities=30% Similarity=0.197 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 193 ~~ivHrDiKp~Nil~~~~~~~kl~DfG 219 (338)
T cd05102 193 RKCIHRDLAARNILLSENNVVKICDFG 219 (338)
T ss_pred CCEECCCCccceEEEcCCCcEEEeecc
Confidence 369999999999999888778899964
No 89
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.35 E-value=0.00035 Score=60.58 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 58999999999999988878899974
No 90
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=97.29 E-value=0.015 Score=47.37 Aligned_cols=189 Identities=13% Similarity=0.149 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhc---CCCCCccceeecccC-CCceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 026343 4 GEALGLGAMYET---RTIRAPRPFKVGALP-TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 79 (240)
Q Consensus 4 ~E~~~L~~l~~~---~~v~vP~v~~~~~~~-~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g 79 (240)
.|+.|...+.+. .++.+.+|+...... --.+|---+|++|.+ ...+.++...-.+||...... +.+.+.
T Consensus 43 ~~AaWsAkvre~L~~~GvRvaRPvrstDGRyVv~GWrA~~fv~G~~-~~R~DEvv~aalrlh~Ala~~-----~~P~fl- 115 (272)
T TIGR02569 43 ARSAWSARVRETLFPDGVRVVRPVRSTDGRYVVAGWRADTFVAGTP-EPRVDETVVAALRLHEALGDL-----ERPGPA- 115 (272)
T ss_pred hhhhhhHHhhhhccCCCeeEecceecCCCCeEecceeeccccCCCc-CcchHHHHHHHHHHHHHHhcC-----CCCccc-
Confidence 466777777764 356667777665321 014566678999984 444555555556677654321 111111
Q ss_pred cccccCCCcccHHHHHH-HhhhHHHHHHHH-Hh---cCC----hHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCe
Q 026343 80 STPQINKWTSNWIEFYA-EHRLGYQLKLAL-DQ---YGD----STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 150 (240)
Q Consensus 80 ~~~~~~~~~~~w~~~~~-~~~l~~~l~~~~-~~---~~~----~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nv 150 (240)
..|.+ .+.|. ..+... +... +. +.. ........++..++.++..+...+..+|||||. ||+
T Consensus 116 -----~~~~~--~d~fa~ADraAW--~e~p~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lrrpv~~p~QlvHgDl~-gt~ 185 (272)
T TIGR02569 116 -----APWAE--IDVFVAADRAAW--EERPLQSVPPGVPTAPPAADPQRSIDLINQIAGLLKPIKSPNQVVHADMY-ATT 185 (272)
T ss_pred -----cccch--hhHHHHHHHHHh--hcccccccccccccccccchhhHHHHHHHHHHHHhcccCCCcceeeeecc-cce
Confidence 11211 12221 111110 0000 00 000 011222234445555555554566789999996 779
Q ss_pred eecCCCCeEEEccCCCCCchhhhhHhh----hh-cCCCHHHHHHhhhcCCCCcCHHHHHHHHHHH
Q 026343 151 SSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 210 (240)
Q Consensus 151 lv~~~~~~~iiD~~~~~Gd~~~Dla~~----~~-~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l~ 210 (240)
|+.+..-++|||...++=+..+=-|.. .+ ++.++.+++.+... +--+...-|..+|+++
T Consensus 186 lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw~h~-p~~~QlllRAllfRl~ 249 (272)
T TIGR02569 186 LYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERFSHL-PEWPQLLLRALMFRLA 249 (272)
T ss_pred eecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHhccC-cchHHHHHHHHHHHHH
Confidence 998777789999655555555555543 12 57788998886543 2112234455566544
No 91
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.27 E-value=0.00068 Score=57.73 Aligned_cols=26 Identities=27% Similarity=0.288 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++.+.|+|+.
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCc
Confidence 58999999999999988878899963
No 92
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.26 E-value=0.0011 Score=56.46 Aligned_cols=26 Identities=27% Similarity=0.275 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 125 ~ivHrDlkp~Nili~~~~~~kl~DfG 150 (332)
T cd05614 125 GIVYRDIKLENILLDSEGHVVLTDFG 150 (332)
T ss_pred CcEecCCCHHHeEECCCCCEEEeeCc
Confidence 58999999999999988878899964
No 93
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.25 E-value=0.0011 Score=57.76 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 121 ~ivHrDlKp~NILl~~~g~~kL~DFG 146 (382)
T cd05625 121 GFIHRDIKPDNILIDRDGHIKLTDFG 146 (382)
T ss_pred CeecCCCCHHHEEECCCCCEEEeECC
Confidence 58999999999999988878899974
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.25 E-value=0.00086 Score=57.13 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg 149 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFG 149 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCc
Confidence 58999999999999988878899963
No 95
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.24 E-value=0.001 Score=54.82 Aligned_cols=26 Identities=23% Similarity=0.055 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...++|+.
T Consensus 142 ~i~h~dlkp~nili~~~~~~kl~d~g 167 (280)
T cd05049 142 HFVHRDLATRNCLVGYDLVVKIGDFG 167 (280)
T ss_pred CeeccccccceEEEcCCCeEEECCcc
Confidence 58999999999999988778899964
No 96
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.23 E-value=0.0021 Score=54.60 Aligned_cols=27 Identities=30% Similarity=0.252 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+||.
T Consensus 115 ~~ivHrDikp~NIll~~~~~~kL~Dfg 141 (325)
T cd05594 115 KNVVYRDLKLENLMLDKDGHIKITDFG 141 (325)
T ss_pred CCEEecCCCCCeEEECCCCCEEEecCC
Confidence 468999999999999988878899974
No 97
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=0.0017 Score=56.02 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcccee---ecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFK---VGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~---~~~~~~~~~~~vme~l~G~~ 45 (240)
.++|.++|+.|+. |.++. +... +...||||||++|..
T Consensus 223 v~~EieILkkL~H------P~IV~~~d~f~~-~ds~YmVlE~v~GGe 262 (475)
T KOG0615|consen 223 VQNEIEILKKLSH------PNIVRIKDFFEV-PDSSYMVLEYVEGGE 262 (475)
T ss_pred hHHHHHHHHhcCC------CCEEEEeeeeec-CCceEEEEEEecCcc
Confidence 3689999998874 44444 3332 467799999999964
No 98
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.21 E-value=0.00065 Score=57.65 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 116 ~ivH~dlkp~NIli~~~~~~kL~DfG 141 (320)
T cd05590 116 GIIYRDLKLDNVLLDHEGHCKLADFG 141 (320)
T ss_pred CeEeCCCCHHHeEECCCCcEEEeeCC
Confidence 58999999999999988878899974
No 99
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.20 E-value=0.00061 Score=58.78 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|++
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeecc
Confidence 68999999999999888878899974
No 100
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.20 E-value=0.0018 Score=55.91 Aligned_cols=26 Identities=23% Similarity=0.334 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeecc
Confidence 68999999999999888878899974
No 101
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.19 E-value=0.00071 Score=58.87 Aligned_cols=26 Identities=27% Similarity=0.343 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 121 givHrDlKp~Nili~~~~~~kL~DFG 146 (381)
T cd05626 121 GFIHRDIKPDNILIDLDGHIKLTDFG 146 (381)
T ss_pred CeeecCCcHHHEEECCCCCEEEeeCc
Confidence 58999999999999888778899974
No 102
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.18 E-value=0.0019 Score=54.79 Aligned_cols=26 Identities=27% Similarity=0.173 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 121 ~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 121 KIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred CeEecCCCHHHeEECCCCcEEeCccc
Confidence 58999999999999988878899974
No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.15 E-value=0.0013 Score=56.12 Aligned_cols=26 Identities=31% Similarity=0.375 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 122 ~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 122 GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred CeEECCCCHHHEEECCCCCEEEEECC
Confidence 58999999999999888878899964
No 104
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.10 E-value=0.0017 Score=56.42 Aligned_cols=26 Identities=27% Similarity=0.371 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++..-++|+.
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecc
Confidence 58999999999999888778899974
No 105
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.10 E-value=0.0011 Score=56.18 Aligned_cols=26 Identities=27% Similarity=0.215 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivHrDikp~Nill~~~~~~kL~Dfg 141 (321)
T cd05591 116 GVIYRDLKLDNILLDAEGHCKLADFG 141 (321)
T ss_pred CeeccCCCHHHeEECCCCCEEEeecc
Confidence 58999999999999988878899974
No 106
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.10 E-value=0.0021 Score=54.64 Aligned_cols=26 Identities=23% Similarity=0.322 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 122 ~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 122 GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred CeEcccCchHheEECCCCCEEeccCC
Confidence 58999999999999988878899963
No 107
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.10 E-value=0.0018 Score=55.00 Aligned_cols=26 Identities=27% Similarity=0.247 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 58999999999999988878899964
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.09 E-value=0.00097 Score=56.41 Aligned_cols=26 Identities=27% Similarity=0.274 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 118 ~i~H~dlkp~Nil~~~~~~~kL~Dfg 143 (318)
T cd05582 118 GIIYRDLKPENILLDEEGHIKLTDFG 143 (318)
T ss_pred CEecCCCCHHHeEECCCCcEEEeecc
Confidence 58999999999999988878899963
No 109
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.09 E-value=0.0024 Score=51.74 Aligned_cols=26 Identities=23% Similarity=0.125 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||++++++...++|+.
T Consensus 114 ~i~H~dl~p~nil~~~~~~~kl~dfg 139 (252)
T cd05084 114 HCIHRDLAARNCLVTEKNVLKISDFG 139 (252)
T ss_pred CccccccchheEEEcCCCcEEECccc
Confidence 48999999999999888778899964
No 110
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.08 E-value=0.002 Score=55.31 Aligned_cols=26 Identities=27% Similarity=0.231 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+|||++.++..-|+|+.
T Consensus 151 ~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 151 NIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred CeEccCCCHHHEEECCCCCEEEecCC
Confidence 58999999999999888878899964
No 111
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.07 E-value=0.0046 Score=51.87 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|.+.|..+.++ -.+++++..... .+..|++|||++|..
T Consensus 54 ~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 94 (303)
T cd05088 54 FAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIEYAPHGN 94 (303)
T ss_pred HHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEEeCCCCc
Confidence 35688888888553 346777777654 568999999999864
No 112
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.06 E-value=0.00071 Score=57.86 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=23.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||+++.++...|+|+.
T Consensus 120 ~giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 120 LGFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred CCeeccCCCHHHeEECCCCCEEeecCC
Confidence 468999999999999988878899964
No 113
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.05 E-value=0.0012 Score=56.20 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 138 ~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 138 DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred CeeecCCCHHHEEECCCCCEEEeecc
Confidence 58999999999999988878899964
No 114
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.05 E-value=0.0017 Score=55.50 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|+.
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg 149 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFG 149 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCC
Confidence 58999999999999888778899964
No 115
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.04 E-value=0.002 Score=54.65 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 120 ~ivH~dlkp~Nil~~~~~~~kl~Dfg 145 (323)
T cd05584 120 GIIYRDLKPENILLDAQGHVKLTDFG 145 (323)
T ss_pred CeecCCCCHHHeEECCCCCEEEeeCc
Confidence 58999999999999888878899964
No 116
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.04 E-value=0.0012 Score=56.82 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecc
Confidence 58999999999999988878899974
No 117
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.04 E-value=0.0029 Score=51.13 Aligned_cols=26 Identities=27% Similarity=0.159 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||++++++...++|+.
T Consensus 113 ~~~H~dl~p~nili~~~~~~~l~d~g 138 (250)
T cd05085 113 NCIHRDLAARNCLVGENNVLKISDFG 138 (250)
T ss_pred CeeecccChheEEEcCCCeEEECCCc
Confidence 58999999999999887767899963
No 118
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.02 E-value=0.0021 Score=53.84 Aligned_cols=26 Identities=27% Similarity=0.165 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-|+|+.
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG 183 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFG 183 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCc
Confidence 58999999999999988778899974
No 119
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.01 E-value=0.0014 Score=55.90 Aligned_cols=26 Identities=23% Similarity=0.230 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivH~dlkp~Nili~~~~~~kL~Dfg 141 (329)
T cd05588 116 GIIYRDLKLDNVLLDAEGHIKLTDYG 141 (329)
T ss_pred CeEecCCCHHHeEECCCCCEEECcCc
Confidence 68999999999999888778899974
No 120
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.00 E-value=0.0021 Score=53.45 Aligned_cols=26 Identities=31% Similarity=0.382 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG 148 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFG 148 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCc
Confidence 58999999999999888878899964
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.99 E-value=0.0023 Score=55.49 Aligned_cols=26 Identities=27% Similarity=0.363 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 162 ~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 162 GFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred CeeccCCCHHHEEEcCCCCEEEEecc
Confidence 58999999999999988878899963
No 122
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.98 E-value=0.0059 Score=52.93 Aligned_cols=28 Identities=39% Similarity=0.451 Sum_probs=22.4
Q ss_pred CCcceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 136 VEPCLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
..| +||+||++.|||++.+. ..-|-||.
T Consensus 161 ~~~-iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 161 EGP-IIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred CCC-eeecccChhhEEEcCCCCEEEECCCc
Confidence 344 99999999999999875 45688863
No 123
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.98 E-value=0.0014 Score=55.72 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (327)
T cd05617 116 GIIYRDLKLDNVLLDADGHIKLTDYG 141 (327)
T ss_pred CeeccCCCHHHEEEeCCCCEEEeccc
Confidence 58999999999999888878899974
No 124
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.97 E-value=0.004 Score=58.05 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=45.3
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccCC-C--CCc--hhhhhHhhh-----h--cCC-CHHHHHHhhhcCCCCcCHHH
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPAC-Y--YGH--NEAEFGMSW-----C--AGF-GGSFYNSYFEVMPKQPGFEK 202 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~-~--~Gd--~~~Dla~~~-----~--~~~-~~~~~~~Y~~~~~~~~~~~~ 202 (240)
.+|-+||+||+..|||+..++...++||.. . +-. -..++...- + .-+ ..+.++-|... +++ +
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~-pI~----e 237 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL-PIG----E 237 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCC-CCc----c
Confidence 567799999999999999888889999742 2 222 344454431 1 111 36788888853 333 3
Q ss_pred HHHHHHHHHH
Q 026343 203 RRDLYMLYHY 212 (240)
Q Consensus 203 r~~~y~l~~~ 212 (240)
.-++|.|--+
T Consensus 238 KsDIWALGcl 247 (738)
T KOG1989|consen 238 KSDIWALGCL 247 (738)
T ss_pred hhHHHHHHHH
Confidence 3456655433
No 125
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=96.97 E-value=0.0025 Score=61.20 Aligned_cols=26 Identities=46% Similarity=0.424 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|++
T Consensus 133 GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 133 GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred CccccCCchheEEEcCCCCEEEEecC
Confidence 58999999999999988878899974
No 126
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.97 E-value=0.0027 Score=55.25 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
+..|.++|+.+..+ -.+.+++..... .+..+++|||++|.++
T Consensus 85 ~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~lv~E~~~~g~L 126 (375)
T cd05104 85 LMSELKVLSYLGNH--INIVNLLGACTV-GGPTLVITEYCCYGDL 126 (375)
T ss_pred HHHHHHHHHHhcCC--cceeeeeeeecc-CCcceeeehhccCCcH
Confidence 35688888888543 345566666544 5678999999999765
No 127
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=96.97 E-value=0.0032 Score=53.43 Aligned_cols=26 Identities=31% Similarity=0.252 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 115 ~ivHrDlkp~NIll~~~~~~kl~DfG 140 (323)
T cd05571 115 DVVYRDLKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred CeEeCCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999988878899964
No 128
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.96 E-value=0.0016 Score=54.67 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||+++.++...++|+.
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCC
Confidence 58999999999999888778899964
No 129
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.95 E-value=0.0047 Score=52.60 Aligned_cols=26 Identities=31% Similarity=0.270 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 115 ~ivHrDikp~NIll~~~~~~kL~DfG 140 (328)
T cd05593 115 KIVYRDLKLENLMLDKDGHIKITDFG 140 (328)
T ss_pred CeEecccCHHHeEECCCCcEEEecCc
Confidence 58999999999999988878899974
No 130
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.95 E-value=0.0026 Score=54.04 Aligned_cols=26 Identities=27% Similarity=0.236 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 115 ~ivH~Dlkp~NIll~~~~~~kL~Dfg 140 (323)
T cd05595 115 DVVYRDIKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred CeEecCCCHHHEEEcCCCCEEecccH
Confidence 58999999999999988878899964
No 131
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.95 E-value=0.0025 Score=54.12 Aligned_cols=26 Identities=27% Similarity=0.253 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|+.
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccc
Confidence 58999999999999988878899964
No 132
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=96.94 E-value=0.0028 Score=52.05 Aligned_cols=26 Identities=35% Similarity=0.368 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++++||+++.++...++|+.
T Consensus 128 ~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 128 GILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred CeeecCCChhhEEEcCCCeEEEeecc
Confidence 58999999999999888778899964
No 133
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=96.94 E-value=0.0033 Score=53.35 Aligned_cols=40 Identities=10% Similarity=0.198 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
..+|..+|..+.. |+-|.-.|.+.+ .+.-|+|++++.|..
T Consensus 72 ~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylVld~~~GGe 111 (357)
T KOG0598|consen 72 TKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLVLDYLNGGE 111 (357)
T ss_pred HHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEEEeccCCcc
Confidence 4678889988664 888988888775 478899999999964
No 134
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.94 E-value=0.0028 Score=53.48 Aligned_cols=26 Identities=27% Similarity=0.239 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 113 ~i~HrDlkp~Nili~~~~~~kl~Dfg 138 (312)
T cd05585 113 NVIYRDLKPENILLDYQGHIALCDFG 138 (312)
T ss_pred CeEeCCCCHHHeEECCCCcEEEEECc
Confidence 58999999999999888878899974
No 135
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.94 E-value=0.0016 Score=55.56 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivH~Dikp~Nili~~~~~~kL~DfG 141 (329)
T cd05618 116 GIIYRDLKLDNVLLDSEGHIKLTDYG 141 (329)
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999988878899974
No 136
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.93 E-value=0.0025 Score=55.30 Aligned_cols=26 Identities=31% Similarity=0.392 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.|||++.++...|+|+.
T Consensus 162 ~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 162 GLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred CeEecCCCHHHEEECCCCCEEEEecc
Confidence 58999999999999988878899964
No 137
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.92 E-value=0.003 Score=52.35 Aligned_cols=26 Identities=31% Similarity=0.314 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...++|+.
T Consensus 117 ~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 117 FVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred CcCCCCCCHHHEEECCCCCEEEccCC
Confidence 48999999999999888778899964
No 138
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.91 E-value=0.0072 Score=53.15 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
+..|+++|+.+..+ -.+++++.+... .+..|++|||++|.++
T Consensus 87 ~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~~~~lv~Ey~~~g~L 128 (400)
T cd05105 87 LMSELKIMTHLGPH--LNIVNLLGACTK-SGPIYIITEYCFYGDL 128 (400)
T ss_pred HHHHHHHHHhcCCC--CCeeeEEEEEcc-CCceEEEEEecCCCcH
Confidence 45688888888643 346667776654 5678999999999765
No 139
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.91 E-value=0.0018 Score=54.02 Aligned_cols=26 Identities=31% Similarity=0.274 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecC
Confidence 58999999999999888778899964
No 140
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.90 E-value=0.0029 Score=52.30 Aligned_cols=26 Identities=27% Similarity=0.211 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...+.|+.
T Consensus 144 ~i~H~dlkp~nili~~~~~~kl~dfg 169 (283)
T cd05090 144 FFVHKDLAARNILIGEQLHVKISDLG 169 (283)
T ss_pred CeehhccccceEEEcCCCcEEecccc
Confidence 58999999999999887767889964
No 141
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=96.89 E-value=0.0015 Score=53.86 Aligned_cols=26 Identities=23% Similarity=0.090 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 139 ~~vH~dlkp~Nil~~~~~~~~l~dfg 164 (277)
T cd05062 139 KFVHRDLAARNCMVAEDFTVKIGDFG 164 (277)
T ss_pred CcccCCcchheEEEcCCCCEEECCCC
Confidence 58999999999999988878899964
No 142
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=96.89 E-value=0.0035 Score=53.04 Aligned_cols=26 Identities=27% Similarity=0.303 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivHrDlkp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05620 116 GIIYRDLKLDNVMLDRDGHIKIADFG 141 (316)
T ss_pred CeEecCCCHHHeEECCCCCEEeCccC
Confidence 58999999999999988878899974
No 143
>PRK10345 hypothetical protein; Provisional
Probab=96.86 E-value=0.0068 Score=48.49 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHhcC--CCCCccceeecccCCCceE---EEEeeccC
Q 026343 2 FEGEALGLGAMYETR--TIRAPRPFKVGALPTGGSY---IIMEFIEF 43 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~--~v~vP~v~~~~~~~~~~~~---~vme~l~G 43 (240)
+.+|+..|+.|.+.. .-.+++++.+...+.|.++ ++||+ +|
T Consensus 43 ~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~-~G 88 (210)
T PRK10345 43 IRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADF-DG 88 (210)
T ss_pred HHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecC-CC
Confidence 468999999996521 2347778877766443333 67888 45
No 144
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.85 E-value=0.0039 Score=51.86 Aligned_cols=27 Identities=26% Similarity=0.172 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|++
T Consensus 120 ~~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 120 LDIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred CCEecCCCCHHHEEECCCCCEEEeeCC
Confidence 358999999999999988878899964
No 145
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=96.85 E-value=0.0081 Score=49.93 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg 155 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFG 155 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCc
Confidence 68999999999999887778899963
No 146
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=96.82 E-value=0.0024 Score=53.04 Aligned_cols=27 Identities=22% Similarity=0.072 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 138 ~~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 138 KKFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred CCCcCCCCChheEEEcCCCcEEECcCC
Confidence 368999999999999988777889963
No 147
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=96.82 E-value=0.0051 Score=50.42 Aligned_cols=26 Identities=27% Similarity=0.157 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...++|+.
T Consensus 126 ~i~h~dlkp~nili~~~~~~~l~dfg 151 (267)
T cd05066 126 GYVHRDLAARNILVNSNLVCKVSDFG 151 (267)
T ss_pred CEeehhhchhcEEECCCCeEEeCCCC
Confidence 58999999999999887777889963
No 148
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=96.81 E-value=0.003 Score=53.11 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||+++.++...|+|+.
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg 149 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFG 149 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccc
Confidence 68999999999999988778899964
No 149
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=96.81 E-value=0.0033 Score=54.70 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
+..|.++|+.+..+ -.+++++..... .+..+++|||++|..+
T Consensus 88 ~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~~~lv~ey~~~g~L 129 (374)
T cd05106 88 LMSELKILSHLGQH--KNIVNLLGACTH-GGPVLVITEYCCYGDL 129 (374)
T ss_pred HHHHHHHHHhhccC--CceeeEeeEecC-CCCeEEeHhhccCCcH
Confidence 34688888888543 335667766554 5678999999998765
No 150
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.80 E-value=0.0041 Score=50.74 Aligned_cols=26 Identities=23% Similarity=0.211 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-|+|+.
T Consensus 123 ~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 123 NYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred CeeeccCCcceEEEcCCCCEEECCcc
Confidence 58999999999999988878899964
No 151
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.80 E-value=0.0034 Score=53.53 Aligned_cols=27 Identities=26% Similarity=0.284 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEecc
Confidence 358999999999999888778899963
No 152
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=96.80 E-value=0.0033 Score=52.41 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
+..|.+.|+.+.. -.+++++..... .+..+++||+++|..+
T Consensus 64 ~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 104 (295)
T cd05097 64 FLKEIKIMSRLKN---PNIIRLLGVCVS-DDPLCMITEYMENGDL 104 (295)
T ss_pred HHHHHHHHHhCCC---CCcCeEEEEEcC-CCccEEEEecCCCCcH
Confidence 3567888877754 346667776654 5678999999998754
No 153
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=96.78 E-value=0.0049 Score=50.50 Aligned_cols=26 Identities=23% Similarity=0.087 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg 145 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYG 145 (269)
T ss_pred CEecccccHhheEecCCCcEEEeccc
Confidence 58999999999999988778899964
No 154
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=96.78 E-value=0.0067 Score=48.63 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=23.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|+.
T Consensus 117 ~~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 117 NGIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred CCEecCCCCHHHEEEccCCeEEEeecc
Confidence 468999999999999988778899963
No 155
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.78 E-value=0.0055 Score=51.25 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|++
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg 160 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFG 160 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCc
Confidence 58999999999999888878899963
No 156
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.76 E-value=0.0086 Score=49.39 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=22.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|++|+||++++++...++|+
T Consensus 121 ~ivH~dl~p~Nil~~~~~~~~l~df 145 (277)
T cd06640 121 KKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred CccCcCCChhhEEEcCCCCEEEccc
Confidence 5799999999999998877889996
No 157
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.76 E-value=0.0052 Score=53.38 Aligned_cols=26 Identities=27% Similarity=0.363 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|+|+.
T Consensus 162 ~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 162 GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 58999999999999988878899964
No 158
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.76 E-value=0.0023 Score=55.06 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~--~~~~~~vme~l~G~~~ 46 (240)
+..|..+|+.|. -|.++...... ++.-|+||||++|.++
T Consensus 56 L~~Ei~iLkel~------H~nIV~l~d~~~~~~~i~lVMEyC~gGDL 96 (429)
T KOG0595|consen 56 LLSEIKILKELK------HPNIVRLLDCIEDDDFIYLVMEYCNGGDL 96 (429)
T ss_pred HHHHHHHHHhcC------CcceeeEEEEEecCCeEEEEEEeCCCCCH
Confidence 567888888877 34455443321 5688999999998754
No 159
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=96.76 E-value=0.0036 Score=50.97 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 124 ~i~H~dl~p~nilv~~~~~~~l~dfg 149 (263)
T cd06625 124 MIVHRDIKGANILRDSAGNVKLGDFG 149 (263)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 58999999999999988778899964
No 160
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.76 E-value=0.0072 Score=49.11 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++..-++|+.
T Consensus 122 ~i~H~dlkp~nil~~~~~~~kl~dfg 147 (256)
T cd05082 122 NFVHRDLAARNVLVSEDNVAKVSDFG 147 (256)
T ss_pred CEeccccchheEEEcCCCcEEecCCc
Confidence 58999999999999988878899964
No 161
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.74 E-value=0.0072 Score=49.36 Aligned_cols=26 Identities=23% Similarity=0.147 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...++|+.
T Consensus 115 ~i~H~dlkp~nil~~~~~~~kl~dfg 140 (257)
T cd05115 115 NFVHRDLAARNVLLVNQHYAKISDFG 140 (257)
T ss_pred CeeecccchheEEEcCCCcEEeccCC
Confidence 58999999999999887777889964
No 162
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.74 E-value=0.0023 Score=53.31 Aligned_cols=26 Identities=27% Similarity=0.086 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 143 ~i~H~dlkp~Nil~~~~~~~~l~dfg 168 (291)
T cd05094 143 HFVHRDLATRNCLVGANLLVKIGDFG 168 (291)
T ss_pred CeeecccCcceEEEccCCcEEECCCC
Confidence 58999999999999988777889963
No 163
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=96.73 E-value=0.0031 Score=53.36 Aligned_cols=26 Identities=31% Similarity=0.300 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivH~dlkp~Nill~~~~~~kL~Dfg 141 (316)
T cd05592 116 GIIYRDLKLDNVLLDKDGHIKIADFG 141 (316)
T ss_pred CEEeCCCCHHHeEECCCCCEEEccCc
Confidence 58999999999999888878899964
No 164
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.70 E-value=0.0042 Score=52.29 Aligned_cols=26 Identities=23% Similarity=0.228 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|++
T Consensus 123 ~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 123 GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred CeeccCCChHHeEEcCCCCEEEeecc
Confidence 58999999999999988778899964
No 165
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.69 E-value=0.0082 Score=49.69 Aligned_cols=26 Identities=23% Similarity=0.193 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...+.|+.
T Consensus 129 gi~H~dlkp~Nil~~~~~~~~l~dfg 154 (284)
T cd05079 129 QYVHRDLAARNVLVESEHQVKIGDFG 154 (284)
T ss_pred CeeecccchheEEEcCCCCEEECCCc
Confidence 58999999999999888777888963
No 166
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=96.69 E-value=0.0097 Score=49.27 Aligned_cols=26 Identities=27% Similarity=0.308 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 117 ~i~H~dlkp~Nili~~~~~~~l~dfg 142 (280)
T cd05608 117 RIIYRDLKPENVLLDNDGNVRISDLG 142 (280)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCc
Confidence 58999999999999887778899964
No 167
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.69 E-value=0.0038 Score=52.54 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...|+|+.
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg 145 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFG 145 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCC
Confidence 58999999999999888777888963
No 168
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.68 E-value=0.0066 Score=51.72 Aligned_cols=26 Identities=31% Similarity=0.345 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 122 ~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 122 HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred CeEecCCCHHHEEECCCCCEEEeecc
Confidence 58999999999999888778899964
No 169
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.68 E-value=0.0092 Score=49.96 Aligned_cols=26 Identities=31% Similarity=0.377 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 123 ~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 123 YILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred CeecCCCCHHHEEECCCCCEEECCCC
Confidence 58999999999999887778899964
No 170
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=96.68 E-value=0.0054 Score=50.70 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=23.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 115 ~i~H~dlkp~Nill~~~~~~~l~dfg 140 (279)
T cd06619 115 KILHRDVKPSNMLVNTRGQVKLCDFG 140 (279)
T ss_pred CEeeCCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999988888899964
No 171
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=96.67 E-value=0.0084 Score=49.54 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++..-++|+.
T Consensus 144 ~i~H~dlkp~nili~~~~~~kl~dfg 169 (286)
T cd06638 144 KTIHRDVKGNNILLTTEGGVKLVDFG 169 (286)
T ss_pred CccccCCCHHhEEECCCCCEEEccCC
Confidence 58999999999999888777789963
No 172
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=96.67 E-value=0.01 Score=48.56 Aligned_cols=26 Identities=27% Similarity=0.160 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...++|+.
T Consensus 126 ~i~H~di~p~nili~~~~~~~l~dfg 151 (266)
T cd05033 126 NYVHRDLAARNILVNSNLVCKVSDFG 151 (266)
T ss_pred CcccCCCCcceEEEcCCCCEEECccc
Confidence 58999999999999988778899963
No 173
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=96.67 E-value=0.0069 Score=49.66 Aligned_cols=26 Identities=23% Similarity=0.072 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...++|+.
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg 145 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYG 145 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCcc
Confidence 58999999999999887767889963
No 174
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.67 E-value=0.0052 Score=52.09 Aligned_cols=26 Identities=27% Similarity=0.253 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCC
Confidence 58999999999999988878899964
No 175
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.66 E-value=0.0085 Score=49.70 Aligned_cols=26 Identities=31% Similarity=0.325 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 125 ~i~H~dl~p~nil~~~~~~~kl~dfg 150 (290)
T cd05613 125 GIIYRDIKLENILLDSNGHVVLTDFG 150 (290)
T ss_pred CeeccCCCHHHeEECCCCCEEEeeCc
Confidence 58999999999999888878899963
No 176
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.66 E-value=0.0037 Score=51.08 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-++|+.
T Consensus 122 ~i~H~dl~p~nil~~~~~~~~l~dfg 147 (265)
T cd06631 122 CVVHRDIKGNNVMLMPNGIIKLIDFG 147 (265)
T ss_pred CcccCCcCHHhEEECCCCeEEeccch
Confidence 48999999999999888777899963
No 177
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.65 E-value=0.009 Score=49.25 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g 148 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFG 148 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCc
Confidence 58999999999999888778888863
No 178
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=96.65 E-value=0.0076 Score=51.04 Aligned_cols=26 Identities=31% Similarity=0.260 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivHrdikp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05619 116 GIVYRDLKLDNILLDTDGHIKIADFG 141 (316)
T ss_pred CeEeCCCCHHHEEECCCCCEEEccCC
Confidence 58999999999999988778899964
No 179
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=96.63 E-value=0.017 Score=46.67 Aligned_cols=26 Identities=31% Similarity=0.199 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...+.|+.
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~ 146 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLG 146 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccc
Confidence 68999999999999988778888963
No 180
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.62 E-value=0.0073 Score=50.08 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 130 ~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 130 RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 58999999999999988878899974
No 181
>PHA03211 serine/threonine kinase US3; Provisional
Probab=96.62 E-value=0.0076 Score=54.06 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|.|||++.++...|+||.
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccC
Confidence 58999999999999887778899974
No 182
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=96.62 E-value=0.0029 Score=60.90 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=22.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
-++||+|++|+|||++..|-.-+=||+
T Consensus 194 mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 194 MGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceeccCCcceeEecccCcEeeccch
Confidence 368999999999999988877777863
No 183
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.61 E-value=0.0081 Score=50.21 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++..-|+|+.
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCc
Confidence 58999999999999988778899963
No 184
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=96.61 E-value=0.01 Score=50.39 Aligned_cols=26 Identities=27% Similarity=0.240 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 116 DIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred CeEeccCCHHHeEECCCCCEEEecCC
Confidence 58999999999999988878899964
No 185
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=96.60 E-value=0.0031 Score=53.39 Aligned_cols=26 Identities=31% Similarity=0.335 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 ~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 116 NIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred CeEeccCCHHHeEECCCCCEEEccCC
Confidence 58999999999999988878899964
No 186
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=96.60 E-value=0.019 Score=46.30 Aligned_cols=26 Identities=27% Similarity=0.148 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...++|+.
T Consensus 123 ~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 123 NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred CeeecccccceEEEccCCeEEEcccC
Confidence 57999999999999888778899964
No 187
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.59 E-value=0.0096 Score=49.21 Aligned_cols=26 Identities=27% Similarity=0.204 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...+.|+.
T Consensus 127 ~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 127 HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred CeeccccChheEEEcCCCcEEEeecc
Confidence 58999999999999888777888963
No 188
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.59 E-value=0.0063 Score=57.17 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=23.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|.|||++.++...|+||.
T Consensus 124 gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 124 GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 58999999999999888878899974
No 189
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.58 E-value=0.0092 Score=48.94 Aligned_cols=25 Identities=12% Similarity=-0.033 Sum_probs=21.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|++|.||++++++...+.|+
T Consensus 127 ~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 127 GYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred CEeeccccHhhEEEcCCCcEEECCC
Confidence 5899999999999988776777785
No 190
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=96.57 E-value=0.0063 Score=49.06 Aligned_cols=26 Identities=27% Similarity=0.386 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|.|++
T Consensus 119 ~i~H~dl~p~ni~i~~~~~~~l~d~~ 144 (254)
T cd06627 119 GVIHRDIKAANILTTKDGVVKLADFG 144 (254)
T ss_pred CcccCCCCHHHEEECCCCCEEEeccc
Confidence 57999999999999987778899964
No 191
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.57 E-value=0.0096 Score=52.16 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|+||+++.++...|+||.
T Consensus 202 ~IvHrDiKP~NIll~~~~~vkL~DFG 227 (391)
T PHA03212 202 RIIHRDIKAENIFINHPGDVCLGDFG 227 (391)
T ss_pred CcccCCCChHhEEEcCCCCEEEEeCC
Confidence 58999999999999888878899974
No 192
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=96.57 E-value=0.014 Score=47.65 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||+++.||+++.++...++|+.
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEeccc
Confidence 358999999999999988878899974
No 193
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.55 E-value=0.005 Score=49.95 Aligned_cols=26 Identities=35% Similarity=0.421 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++...++|+.
T Consensus 113 ~i~H~di~~~nil~~~~~~~~l~dfg 138 (265)
T cd05579 113 GIIHRDLKPDNILIDSNGHLKLTDFG 138 (265)
T ss_pred CeecCCCCHHHeEEcCCCCEEEEecc
Confidence 58999999999999988878899964
No 194
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.54 E-value=0.0094 Score=50.43 Aligned_cols=26 Identities=27% Similarity=0.244 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 116 ~ivH~dlkp~Nill~~~~~~kl~Dfg 141 (318)
T cd05570 116 GIIYRDLKLDNVLLDSEGHIKIADFG 141 (318)
T ss_pred CeEccCCCHHHeEECCCCcEEecccC
Confidence 58999999999999988878899964
No 195
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.54 E-value=0.012 Score=48.41 Aligned_cols=26 Identities=23% Similarity=0.334 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+.|.||++++++...++|+.
T Consensus 121 ~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 121 GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 68999999999999987777889963
No 196
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.54 E-value=0.0073 Score=50.06 Aligned_cols=26 Identities=27% Similarity=0.288 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 125 ~~~H~dl~p~nil~~~~~~~~l~dfg 150 (288)
T cd05583 125 GIIYRDIKLENILLDSEGHVVLTDFG 150 (288)
T ss_pred CeeccCCCHHHeEECCCCCEEEEECc
Confidence 58999999999999888778899974
No 197
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=96.54 E-value=0.017 Score=46.69 Aligned_cols=27 Identities=22% Similarity=0.091 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 124 ~~i~H~di~p~nili~~~~~~~l~dfg 150 (262)
T cd00192 124 KKFVHRDLAARNCLVGEDLVVKISDFG 150 (262)
T ss_pred CCcccCccCcceEEECCCCcEEEcccc
Confidence 358999999999999988778899963
No 198
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=96.53 E-value=0.0088 Score=49.45 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|+|+.
T Consensus 115 ~ivH~dikp~Nili~~~~~~~l~Dfg 140 (277)
T cd05607 115 DIVYRDMKPENVLLDDQGNCRLSDLG 140 (277)
T ss_pred CEEEccCChHhEEEcCCCCEEEeece
Confidence 58999999999999888778899964
No 199
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=96.52 E-value=0.016 Score=47.75 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++++||++++++...++|+.
T Consensus 120 ~~i~h~dl~p~Ni~i~~~~~~~l~dfg 146 (277)
T cd06641 120 EKKIHRDIKAANVLLSEHGEVKLADFG 146 (277)
T ss_pred CCeecCCCCHHhEEECCCCCEEEeecc
Confidence 468999999999999888777889963
No 200
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=96.52 E-value=0.0075 Score=50.97 Aligned_cols=37 Identities=27% Similarity=0.341 Sum_probs=30.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-C-CCCchhhhhH
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAEFG 175 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~-~~Gd~~~Dla 175 (240)
-++|+||++.|+|....|..-|-||. + -+|.|.--++
T Consensus 197 wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T 235 (419)
T KOG0663|consen 197 WILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT 235 (419)
T ss_pred eeEecccchhheeeccCCcEEecccchhhhhcCCcccCc
Confidence 48999999999999888888999983 4 4998844444
No 201
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=96.52 E-value=0.01 Score=48.50 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-++|++
T Consensus 126 ~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 126 RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 68999999999999887777889964
No 202
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.51 E-value=0.0089 Score=50.78 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
++|...|..++++ |+|||.|+.... +.+||+||...
T Consensus 333 EkEmhNL~RMq~~-GlpcP~vV~lkk-----hvLVMsFiGd~ 368 (531)
T KOG2269|consen 333 EKEMHNLSRMQKH-GLPCPQVVKLKK-----HVLVMSFIGDQ 368 (531)
T ss_pred HHHHHHHHHHHhc-CCCCCceeeeec-----ceEEEEeecCC
Confidence 6788888888887 899999999875 49999999643
No 203
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=96.51 E-value=0.024 Score=46.49 Aligned_cols=27 Identities=30% Similarity=0.233 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-++|+.
T Consensus 131 ~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 131 KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CCEeecccccceEEEcCCCeEEECCCC
Confidence 368999999999999887767789964
No 204
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=96.50 E-value=0.015 Score=47.02 Aligned_cols=26 Identities=27% Similarity=0.159 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|+|+.
T Consensus 113 ~i~h~di~p~nili~~~~~~~l~d~g 138 (251)
T cd05041 113 NCIHRDLAARNCLVGENNVLKISDFG 138 (251)
T ss_pred CEehhhcCcceEEEcCCCcEEEeecc
Confidence 58999999999999888778899963
No 205
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=96.50 E-value=0.015 Score=47.28 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=22.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-++|+.
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g 145 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFG 145 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCC
Confidence 58999999999999887767788963
No 206
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.50 E-value=0.022 Score=49.48 Aligned_cols=103 Identities=21% Similarity=0.267 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCC-ceEEEEeeccCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCcccc
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS 80 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~-~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~ 80 (240)
|..|.++|..++. +- +=+++++... .+ ..++|+||++..++ =..||.....
T Consensus 118 F~~Ei~~ls~l~H--~N-lv~LlGyC~e-~~~~~~LVYEym~nGsL----------~d~L~~~~~~-------------- 169 (361)
T KOG1187|consen 118 FLNEVEILSRLRH--PN-LVKLLGYCLE-GGEHRLLVYEYMPNGSL----------EDHLHGKKGE-------------- 169 (361)
T ss_pred HHHHHHHHhcCCC--cC-cccEEEEEec-CCceEEEEEEccCCCCH----------HHHhCCCCCC--------------
Confidence 5677777777773 22 3346777765 34 48999999986542 2344442210
Q ss_pred ccccCCCcccHHHHHHHhhhHHHHHHHHHhcCChHHHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEE
Q 026343 81 TPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVI 160 (240)
Q Consensus 81 ~~~~~~~~~~w~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~i 160 (240)
+ -+|.. |+.-.+.. .+.+ ++|.. ...|.+||+|+++.|||.|.+-.+-|
T Consensus 170 -~------L~W~~-----R~kIa~g~--------------A~gL----~yLH~-~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 170 -P------LDWET-----RLKIALGA--------------ARGL----AYLHE-GCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred -C------CCHHH-----HHHHHHHH--------------HHHH----HHHcc-CCCCCEecCCCCHHHeeECCCCCEEc
Confidence 0 14432 23211111 1222 24444 36778999999999999998776778
Q ss_pred Ecc
Q 026343 161 LDP 163 (240)
Q Consensus 161 iD~ 163 (240)
-||
T Consensus 219 sDF 221 (361)
T KOG1187|consen 219 SDF 221 (361)
T ss_pred cCc
Confidence 886
No 207
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.50 E-value=0.013 Score=47.77 Aligned_cols=26 Identities=27% Similarity=0.266 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++..-|+|+.
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g 145 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFG 145 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCc
Confidence 58999999999999887777899963
No 208
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=96.49 E-value=0.011 Score=48.27 Aligned_cols=26 Identities=31% Similarity=0.219 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++++||++++++..-|+|+.
T Consensus 122 ~i~H~dl~~~Nill~~~~~~~l~dfg 147 (260)
T cd05069 122 NYIHRDLRAANILVGDNLVCKIADFG 147 (260)
T ss_pred CEeecccCcceEEEcCCCeEEECCCc
Confidence 58999999999999888777888964
No 209
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=96.49 E-value=0.0092 Score=48.81 Aligned_cols=26 Identities=27% Similarity=0.203 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...|+|+.
T Consensus 122 ~i~H~dl~p~Nill~~~~~~~L~dfg 147 (262)
T cd05071 122 NYVHRDLRAANILVGENLVCKVADFG 147 (262)
T ss_pred CccccccCcccEEEcCCCcEEeccCC
Confidence 58999999999999888777899963
No 210
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.48 E-value=0.0073 Score=49.99 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 120 ~i~H~dlkp~Nill~~~~~~kl~Dfg 145 (287)
T cd07848 120 DIVHRDIKPENLLISHNDVLKLCDFG 145 (287)
T ss_pred CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 58999999999999888778899963
No 211
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.48 E-value=0.0094 Score=48.38 Aligned_cols=27 Identities=30% Similarity=0.334 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|+||+++.++...|+|+.
T Consensus 119 ~~~~H~dl~p~nili~~~~~~kl~Dfg 145 (254)
T cd05083 119 KKLVHRDLAARNILVSEDGVAKVSDFG 145 (254)
T ss_pred CCeeccccCcceEEEcCCCcEEECCCc
Confidence 368999999999999888878899964
No 212
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=96.48 E-value=0.0049 Score=50.33 Aligned_cols=26 Identities=31% Similarity=0.377 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|.|+.
T Consensus 126 ~ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 126 GIIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred CcccccCCHHHEEEcCCCCEEecccC
Confidence 48999999999999888778899963
No 213
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.47 E-value=0.02 Score=47.69 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|++.|+.+.. ..+.+++..... .+..+++||+++|..
T Consensus 66 ~~~E~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 105 (296)
T cd05095 66 FLKEIKIMSRLKD---PNIIRLLAVCIT-SDPLCMITEYMENGD 105 (296)
T ss_pred HHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEEEeCCCCc
Confidence 3467777777753 446667776654 567899999999865
No 214
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=96.47 E-value=0.014 Score=49.59 Aligned_cols=26 Identities=31% Similarity=0.312 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 116 NIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred CeEecCCCHHHeEECCCCCEEEccCC
Confidence 58999999999999888778899964
No 215
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=96.47 E-value=0.013 Score=47.58 Aligned_cols=26 Identities=35% Similarity=0.335 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...++|+.
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg 145 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFG 145 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccC
Confidence 68999999999999887777888953
No 216
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.47 E-value=0.011 Score=49.76 Aligned_cols=26 Identities=23% Similarity=0.195 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...++|+.
T Consensus 154 gi~H~dlkp~Nill~~~~~~kL~Dfg 179 (314)
T cd05099 154 RCIHRDLAARNVLVTEDNVMKIADFG 179 (314)
T ss_pred CeeeccccceeEEEcCCCcEEEcccc
Confidence 68999999999999888778899964
No 217
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=96.46 E-value=0.016 Score=47.20 Aligned_cols=26 Identities=19% Similarity=0.235 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 126 ~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 126 RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CEecCCcChhhEEECCCCcEEEeccc
Confidence 68999999999999888777888863
No 218
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.46 E-value=0.0063 Score=50.85 Aligned_cols=26 Identities=23% Similarity=0.297 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 136 givH~dl~p~Nilv~~~~~~~l~dfg 161 (292)
T cd06657 136 GVIHRDIKSDSILLTHDGRVKLSDFG 161 (292)
T ss_pred CeecCCCCHHHEEECCCCCEEEcccc
Confidence 58999999999999988778899964
No 219
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=96.45 E-value=0.014 Score=47.70 Aligned_cols=26 Identities=23% Similarity=0.175 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|+|+.
T Consensus 124 ~i~H~dlkp~nil~~~~~~~kl~df~ 149 (263)
T cd05052 124 NFIHRDLAARNCLVGENHLVKVADFG 149 (263)
T ss_pred CEeecccCcceEEEcCCCcEEeCCCc
Confidence 58999999999999888778899964
No 220
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.45 E-value=0.009 Score=50.12 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|.++|+.+.++ -.+.+.+..... .+..+++||+++|..
T Consensus 85 ~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 125 (302)
T cd05055 85 LMSELKIMSHLGNH--ENIVNLLGACTI-GGPILVITEYCCYGD 125 (302)
T ss_pred HHHHHHHHHhccCC--CCcceEEEEEec-CCceEEEEEcCCCCc
Confidence 35688888888543 345666666544 567899999999864
No 221
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=96.45 E-value=0.025 Score=48.42 Aligned_cols=27 Identities=30% Similarity=0.197 Sum_probs=23.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 198 ~~i~H~dikp~Nil~~~~~~~kl~dfg 224 (343)
T cd05103 198 RKCIHRDLAARNILLSENNVVKICDFG 224 (343)
T ss_pred CCeecCCCccCeEEEcCCCcEEEEecc
Confidence 478999999999999888778899964
No 222
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.45 E-value=0.0067 Score=50.81 Aligned_cols=26 Identities=27% Similarity=0.208 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 157 givH~dlkp~Nili~~~~~~kl~D~g 182 (304)
T cd05101 157 KCIHRDLAARNVLVTENNVMKIADFG 182 (304)
T ss_pred CeeecccccceEEEcCCCcEEECCCc
Confidence 58999999999999887777888963
No 223
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=96.44 E-value=0.017 Score=47.65 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|+.
T Consensus 123 ~i~H~dlkp~nili~~~~~~kl~dfg 148 (282)
T cd06643 123 KIIHRDLKAGNILFTLDGDIKLADFG 148 (282)
T ss_pred CeeecCCCcccEEEccCCCEEEcccc
Confidence 58999999999999888878899963
No 224
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.44 E-value=0.023 Score=47.38 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-|+|+.
T Consensus 139 ~ivH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 139 QFIHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CcccCcCCcceEEECCCCeEEECCcC
Confidence 58999999999999887767788964
No 225
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=96.42 E-value=0.016 Score=47.46 Aligned_cols=26 Identities=27% Similarity=0.160 Sum_probs=22.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 126 g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 126 NYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred CEeecccChheEEEcCCCcEEECCCc
Confidence 68999999999999887767788863
No 226
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=96.41 E-value=0.014 Score=47.48 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=24.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++++||+++.++...|+|+.
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g 146 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFG 146 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 579999999999999988778899963
No 227
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.41 E-value=0.0077 Score=52.68 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=23.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|.|||++.++...|+|+.
T Consensus 205 givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 205 GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred CccccCCCHHHEEEcCCCCEEEccCc
Confidence 58999999999999988878899974
No 228
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=96.41 E-value=0.016 Score=47.76 Aligned_cols=26 Identities=23% Similarity=0.121 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-|+|++
T Consensus 144 ~i~H~dlkp~Nil~~~~~~~~L~dfg 169 (283)
T cd05048 144 HFVHRDLAARNCLVGEGLTVKISDFG 169 (283)
T ss_pred CeeccccccceEEEcCCCcEEECCCc
Confidence 58999999999999887767788964
No 229
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=96.40 E-value=0.014 Score=48.10 Aligned_cols=27 Identities=19% Similarity=0.280 Sum_probs=23.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-+.|+.
T Consensus 120 ~~ivH~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06642 120 ERKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred CCeeccCCChheEEEeCCCCEEEcccc
Confidence 368999999999999888777888963
No 230
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=96.40 E-value=0.016 Score=47.86 Aligned_cols=26 Identities=27% Similarity=0.219 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|+|+.
T Consensus 128 ~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 128 RYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred CceeccCCHhhEEECCCCeEEECCCc
Confidence 58999999999999887767888963
No 231
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=96.38 E-value=0.018 Score=47.25 Aligned_cols=25 Identities=24% Similarity=0.319 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|||++|.||++++++...++|+
T Consensus 118 ~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (274)
T cd06609 118 GKIHRDIKAANILLSEEGDVKLADF 142 (274)
T ss_pred CcccCCCCHHHEEECCCCCEEEccc
Confidence 5899999999999998887888986
No 232
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.37 E-value=0.013 Score=49.73 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=20.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|++|.||+++.++...+.|+
T Consensus 121 ~iiH~dlkp~Nil~~~~~~~~l~~~ 145 (327)
T cd08227 121 GYVHRSVKASHILISVDGKVYLSGL 145 (327)
T ss_pred CEecCCCChhhEEEecCCcEEEccc
Confidence 5899999999999988776666664
No 233
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=96.36 E-value=0.013 Score=48.43 Aligned_cols=27 Identities=30% Similarity=0.368 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||+++.++...|+|+.
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccc
Confidence 358999999999999988778899963
No 234
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=96.35 E-value=0.0083 Score=48.54 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++++||+++.++..-|+|+.
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~ 147 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFG 147 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCc
Confidence 58999999999999888778899963
No 235
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.35 E-value=0.014 Score=47.39 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...++|+.
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~d~g 147 (256)
T cd05039 122 NFVHRDLAARNVLVSEDLVAKVSDFG 147 (256)
T ss_pred CccchhcccceEEEeCCCCEEEcccc
Confidence 58999999999999888778899964
No 236
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=96.34 E-value=0.014 Score=47.39 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-++|++
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg 145 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFG 145 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcc
Confidence 48999999999999888777889964
No 237
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=96.34 E-value=0.012 Score=47.85 Aligned_cols=26 Identities=23% Similarity=0.124 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++..-+.|+.
T Consensus 124 ~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 124 NSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred CeeccccCcceEEEcCCceEEEcccc
Confidence 48999999999999888777788963
No 238
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.33 E-value=0.011 Score=48.96 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 122 ~~i~H~dl~p~nil~~~~~~~~l~dfg 148 (286)
T cd06622 122 HNIIHRDVKPTNVLVNGNGQVKLCDFG 148 (286)
T ss_pred CCEeeCCCCHHHEEECCCCCEEEeecC
Confidence 368999999999999987778899964
No 239
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=96.32 E-value=0.025 Score=46.90 Aligned_cols=27 Identities=22% Similarity=0.151 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...++|+.
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg 177 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFG 177 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCccc
Confidence 358999999999999888777899964
No 240
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=96.32 E-value=0.022 Score=46.06 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++++||++++++...|.|+.
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccc
Confidence 47999999999999988878899963
No 241
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.31 E-value=0.0086 Score=49.09 Aligned_cols=26 Identities=35% Similarity=0.307 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||+++.++...++|+.
T Consensus 122 ~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 122 GIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred CeeecCCCHHHeEECCCCCEEecCCc
Confidence 58999999999999888878899964
No 242
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=96.31 E-value=0.012 Score=47.66 Aligned_cols=26 Identities=31% Similarity=0.207 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++..-|.|+.
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~ 146 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFG 146 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCc
Confidence 58999999999999988777788963
No 243
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=96.31 E-value=0.024 Score=46.98 Aligned_cols=26 Identities=27% Similarity=0.192 Sum_probs=22.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..++|||++|.||++++++..-|.|+
T Consensus 146 ~~ivH~dikp~nill~~~~~~kl~df 171 (290)
T cd05045 146 MKLVHRDLAARNVLVAEGRKMKISDF 171 (290)
T ss_pred CCeehhhhhhheEEEcCCCcEEeccc
Confidence 36899999999999988777778896
No 244
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=96.31 E-value=0.0099 Score=49.35 Aligned_cols=27 Identities=26% Similarity=0.100 Sum_probs=23.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-++|+.
T Consensus 139 ~~i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 139 QHFVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCeeecccCcceEEEccCCcEEeccCC
Confidence 358999999999999888777788963
No 245
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.30 E-value=0.013 Score=50.91 Aligned_cols=28 Identities=32% Similarity=0.338 Sum_probs=24.4
Q ss_pred CcceeccCCCCCCeeecCC-CCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKN-GEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~-~~~~iiD~~ 164 (240)
...++|+||++.|++++++ +..-|+||.
T Consensus 138 ~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 138 SRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred hCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 3479999999999999988 778899974
No 246
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.30 E-value=0.014 Score=47.46 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=22.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...+.|+.
T Consensus 123 ~i~H~dl~p~nili~~~~~~~l~dfg 148 (261)
T cd05072 123 NYIHRDLRAANVLVSESLMCKIADFG 148 (261)
T ss_pred CeeccccchhhEEecCCCcEEECCCc
Confidence 58999999999999988767788863
No 247
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.29 E-value=0.03 Score=45.08 Aligned_cols=26 Identities=31% Similarity=0.249 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++++||++++++...|+|+.
T Consensus 123 ~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 123 KILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred CEecccCChHHeEEcCCCcEEECCcc
Confidence 68999999999999987778899963
No 248
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=96.29 E-value=0.026 Score=45.81 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+.|.||++++++...|.|+.
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g 146 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFG 146 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccc
Confidence 58999999999999988778899963
No 249
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=96.28 E-value=0.012 Score=47.85 Aligned_cols=27 Identities=26% Similarity=0.371 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++++||++++++...++|+.
T Consensus 119 ~~~~H~~l~~~ni~~~~~~~~~l~df~ 145 (264)
T cd06623 119 RHIIHRDIKPSNLLINSKGEVKIADFG 145 (264)
T ss_pred CCCccCCCCHHHEEECCCCCEEEccCc
Confidence 578999999999999988878899963
No 250
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=96.27 E-value=0.0096 Score=49.08 Aligned_cols=26 Identities=27% Similarity=0.279 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++...++|+.
T Consensus 115 ~i~H~di~p~Nil~~~~~~~~l~dfg 140 (277)
T cd05577 115 RIVYRDLKPENVLLDDHGNVRISDLG 140 (277)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCc
Confidence 58999999999999988878899963
No 251
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=96.27 E-value=0.02 Score=47.28 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 4 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 4 ~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
.|+..++.+. ...+++++.+... .+..++||||++|.+
T Consensus 65 ~~~~~~~~l~---h~niv~~~~~~~~-~~~~~lv~ey~~~g~ 102 (274)
T cd05076 65 ETASLMSQVS---HIHLAFVHGVCVR-GSENIMVEEFVEHGP 102 (274)
T ss_pred HHHHHHhcCC---CCCeeeEEEEEEe-CCceEEEEecCCCCc
Confidence 3444444443 2446677776654 567899999999875
No 252
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.26 E-value=0.017 Score=48.31 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|++
T Consensus 136 gi~H~dLkp~Nill~~~~~~kl~dfg 161 (296)
T cd06654 136 QVIHRDIKSDNILLGMDGSVKLTDFG 161 (296)
T ss_pred CcccCCCCHHHEEEcCCCCEEECccc
Confidence 48999999999999888778899964
No 253
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=96.25 E-value=0.023 Score=46.01 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=22.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g 145 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFG 145 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCc
Confidence 58999999999999877777899963
No 254
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.25 E-value=0.015 Score=48.26 Aligned_cols=26 Identities=31% Similarity=0.240 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-|+|+.
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05605 122 RIVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred CcEecCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999887777899963
No 255
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=96.25 E-value=0.026 Score=47.84 Aligned_cols=26 Identities=31% Similarity=0.322 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 116 givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 116 NIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred CeeecCCCHHHeEECCCCCEEEeecC
Confidence 58999999999999988878899974
No 256
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.25 E-value=0.011 Score=53.64 Aligned_cols=26 Identities=31% Similarity=0.297 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|+|||++.++...|+||.
T Consensus 287 gIiHrDLKP~NILl~~~~~vkL~DFG 312 (501)
T PHA03210 287 KLIHRDIKLENIFLNCDGKIVLGDFG 312 (501)
T ss_pred CeecCCCCHHHEEECCCCCEEEEeCC
Confidence 58999999999999988878899974
No 257
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.24 E-value=0.018 Score=47.08 Aligned_cols=26 Identities=31% Similarity=0.230 Sum_probs=22.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 127 ~i~H~dlkp~Nili~~~~~~kl~dfg 152 (268)
T cd05063 127 NYVHRDLAARNILVNSNLECKVSDFG 152 (268)
T ss_pred CeeccccchhhEEEcCCCcEEECCCc
Confidence 58999999999999887767788963
No 258
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=96.24 E-value=0.025 Score=46.11 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-++|+.
T Consensus 133 ~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 133 KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred CcccCCCCHHHEEEccCCeEEECCCc
Confidence 58999999999999888777789963
No 259
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=96.24 E-value=0.027 Score=45.57 Aligned_cols=28 Identities=32% Similarity=0.279 Sum_probs=24.4
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
...++|||++|.||++++++..-++|+.
T Consensus 128 ~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 128 GNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred cCcceecCCCHHHEEEecCCCEEEeccc
Confidence 5679999999999999987778899963
No 260
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=96.22 E-value=0.034 Score=46.35 Aligned_cols=26 Identities=31% Similarity=0.299 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
-++.+||+|.|||.|.+|-.-|+||.
T Consensus 164 ~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 164 DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred CeeeccCChHHeeeccCCcEEEEecc
Confidence 48999999999999998878899953
No 261
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.22 E-value=0.011 Score=48.26 Aligned_cols=26 Identities=27% Similarity=0.328 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|+|+.
T Consensus 126 ~i~H~dl~p~nil~~~~~~~~l~Dfg 151 (265)
T cd06652 126 MIVHRDIKGANILRDSVGNVKLGDFG 151 (265)
T ss_pred CEecCCCCHHHEEecCCCCEEECcCc
Confidence 48999999999999988878899964
No 262
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=96.20 E-value=0.036 Score=44.82 Aligned_cols=26 Identities=23% Similarity=0.212 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~ 147 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLG 147 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEeccc
Confidence 58999999999999887777899963
No 263
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=96.20 E-value=0.019 Score=46.67 Aligned_cols=26 Identities=31% Similarity=0.183 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-++|+.
T Consensus 123 ~i~h~di~p~nili~~~~~~~l~d~g 148 (261)
T cd05034 123 NYIHRDLAARNILVGENLVCKIADFG 148 (261)
T ss_pred CcccCCcchheEEEcCCCCEEECccc
Confidence 48999999999999988777889964
No 264
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=96.20 E-value=0.015 Score=48.06 Aligned_cols=26 Identities=23% Similarity=0.078 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|.|+.
T Consensus 142 ~i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 142 HFVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CeecccccHhhEEEcCCCCEEECCCC
Confidence 58999999999999887767888963
No 265
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=96.20 E-value=0.016 Score=48.11 Aligned_cols=26 Identities=31% Similarity=0.262 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 122 ~iiH~dikp~Nill~~~~~~kl~Dfg 147 (285)
T cd05631 122 RIVYRDLKPENILLDDRGHIRISDLG 147 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999887778899964
No 266
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.20 E-value=0.022 Score=48.49 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 154 givH~dlkp~Nill~~~~~~kL~Dfg 179 (334)
T cd05100 154 KCIHRDLAARNVLVTEDNVMKIADFG 179 (334)
T ss_pred CeeccccccceEEEcCCCcEEECCcc
Confidence 58999999999999888777888863
No 267
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.18 E-value=0.018 Score=47.18 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|.++|+.+.. -.+++++..... .+..+++||+++|..
T Consensus 55 ~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 94 (275)
T cd05046 55 FRRELDMFRKLSH---KNVVRLLGLCRE-AEPHYMILEYTDLGD 94 (275)
T ss_pred HHHHHHHHHhcCC---cceeeeEEEECC-CCcceEEEEecCCCc
Confidence 4678888888853 234567766543 467899999998764
No 268
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=96.18 E-value=0.018 Score=46.88 Aligned_cols=26 Identities=31% Similarity=0.392 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...++|+.
T Consensus 122 ~i~h~~l~p~ni~~~~~~~~~l~df~ 147 (267)
T cd06610 122 GQIHRDIKAGNILLGEDGSVKIADFG 147 (267)
T ss_pred CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 58999999999999988777899963
No 269
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.18 E-value=0.02 Score=47.42 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~g 149 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFG 149 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCC
Confidence 58999999999999888778899964
No 270
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.17 E-value=0.021 Score=47.95 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-++|+.
T Consensus 160 gi~H~dlkp~Nill~~~~~~kL~dfg 185 (307)
T cd05098 160 KCIHRDLAARNVLVTEDNVMKIADFG 185 (307)
T ss_pred CcccccccHHheEEcCCCcEEECCCc
Confidence 68999999999999888777889964
No 271
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=96.16 E-value=0.018 Score=47.84 Aligned_cols=26 Identities=31% Similarity=0.193 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg 147 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCC
Confidence 58999999999999887777899964
No 272
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.16 E-value=0.016 Score=46.74 Aligned_cols=27 Identities=26% Similarity=0.232 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||+++.++...++|+.
T Consensus 112 ~~~~H~~l~p~ni~~~~~~~~~l~d~~ 138 (250)
T cd05123 112 LGIIYRDLKPENILLDADGHIKLTDFG 138 (250)
T ss_pred CCceecCCCcceEEEcCCCcEEEeecC
Confidence 358999999999999888778889964
No 273
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=96.15 E-value=0.025 Score=46.13 Aligned_cols=26 Identities=27% Similarity=0.233 Sum_probs=21.4
Q ss_pred ceeccCCCCCCeeecCCC-----CeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNG-----EPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~-----~~~iiD~~ 164 (240)
.++|+|++|.||++++++ ..-++|+.
T Consensus 126 ~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 126 HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 489999999999998765 56788863
No 274
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.14 E-value=0.015 Score=47.94 Aligned_cols=26 Identities=31% Similarity=0.330 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|.|+.
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg 146 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFG 146 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECccc
Confidence 58999999999999988878899963
No 275
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.13 E-value=0.04 Score=45.66 Aligned_cols=26 Identities=31% Similarity=0.289 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 123 ~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 123 HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred CcccCCCChHHEEEcCCCcEEEeccc
Confidence 58999999999999888878899964
No 276
>PHA02988 hypothetical protein; Provisional
Probab=96.13 E-value=0.021 Score=47.52 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeeccc--C-CCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~--~-~~~~~~vme~l~G~~~ 46 (240)
+.+|+..|+.+.. + .+.+++..... . ....+++|||++|..+
T Consensus 65 ~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L 109 (283)
T PHA02988 65 TENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPRLSLILEYCTRGYL 109 (283)
T ss_pred HHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCceEEEEEeCCCCcH
Confidence 4578888888864 2 56666665432 1 2367899999999753
No 277
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=96.11 E-value=0.013 Score=47.71 Aligned_cols=27 Identities=26% Similarity=0.270 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|+++.||++++++...++|+.
T Consensus 112 ~~~~h~dl~~~nilv~~~~~~~l~df~ 138 (262)
T cd05572 112 RGIIYRDLKPENLLLDSNGYVKLVDFG 138 (262)
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCC
Confidence 468999999999999888878899963
No 278
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.11 E-value=0.025 Score=46.19 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||++++++..-|+|+.
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg 151 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFG 151 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCc
Confidence 58999999999999887777889963
No 279
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.08 E-value=0.035 Score=45.56 Aligned_cols=26 Identities=27% Similarity=0.211 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...+.|++
T Consensus 129 ~i~H~dl~p~nil~~~~~~~~l~dfg 154 (284)
T cd05038 129 RYIHRDLAARNILVESEDLVKISDFG 154 (284)
T ss_pred CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 58999999999999988778899963
No 280
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.08 E-value=0.047 Score=44.39 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 43 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G 43 (240)
+..|+.+.+.|+. ++-.|.+..++.. .....+||+.+..
T Consensus 57 L~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVMdLLGP 95 (341)
T KOG1163|consen 57 LLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVMDLLGP 95 (341)
T ss_pred hhHHHHHHHHhcc--CCCCchhhhhccc-cccceeeeeccCc
Confidence 4568999999987 6888888888865 5677899998843
No 281
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.08 E-value=0.034 Score=45.79 Aligned_cols=27 Identities=26% Similarity=0.208 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|++
T Consensus 128 ~~i~H~di~p~nil~~~~~~~kL~dfg 154 (279)
T cd05057 128 KRLVHRDLAARNVLVKTPQHVKITDFG 154 (279)
T ss_pred CCEEecccCcceEEEcCCCeEEECCCc
Confidence 468999999999999887777888964
No 282
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.06 E-value=0.034 Score=45.54 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 127 ~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 127 RFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred CeeccccChheEEEecCCCeEEccCc
Confidence 58999999999999887777888863
No 283
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=96.06 E-value=0.019 Score=47.10 Aligned_cols=26 Identities=23% Similarity=0.073 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 119 ~i~H~dikp~nil~~~~~~~~l~Dfg 144 (268)
T cd05086 119 NFLHSDLALRNCFLTSDLTVKVGDYG 144 (268)
T ss_pred CeeccCCccceEEEcCCccEEecccc
Confidence 48999999999999887777889964
No 284
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=96.05 E-value=0.015 Score=47.99 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...++|+.
T Consensus 120 ~i~h~~l~p~ni~~~~~~~~~l~dfg 145 (286)
T cd07846 120 NIIHRDIKPENILVSQSGVVKLCDFG 145 (286)
T ss_pred CccccCCCHHHEEECCCCcEEEEeee
Confidence 58999999999999888878899963
No 285
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.04 E-value=0.035 Score=46.03 Aligned_cols=26 Identities=35% Similarity=0.385 Sum_probs=22.0
Q ss_pred ceeccCCCCCCeeecC-CCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDK-NGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~-~~~~~iiD~~ 164 (240)
.++|+|+++.||+++. ++...+.|+.
T Consensus 130 ~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 130 GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred CeeecCCChHHEEEecCCCeEEEeecc
Confidence 5899999999999987 5667788963
No 286
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.00 E-value=0.029 Score=46.21 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=22.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..++|||++|.||+++.++...|+|+
T Consensus 119 ~~i~H~dl~p~nil~~~~~~~~l~df 144 (286)
T cd07847 119 HNCIHRDVKPENILITKQGQIKLCDF 144 (286)
T ss_pred CCceecCCChhhEEEcCCCcEEECcc
Confidence 35799999999999998877788996
No 287
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.00 E-value=0.027 Score=46.52 Aligned_cols=26 Identities=31% Similarity=0.314 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...++|+.
T Consensus 117 ~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 117 FVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred CEEcCCCCHHHEEECCCCCEEEccCc
Confidence 58999999999999888777899964
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=96.00 E-value=0.034 Score=46.12 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|+.
T Consensus 148 ~ivH~dlkp~nili~~~~~~kl~dfg 173 (291)
T cd06639 148 RIIHRDVKGNNILLTTEGGVKLVDFG 173 (291)
T ss_pred CeeccCCCHHHEEEcCCCCEEEeecc
Confidence 58999999999999888778899963
No 289
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.00 E-value=0.02 Score=46.67 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...+.|+.
T Consensus 126 ~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 126 RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeecCCCCHHHEEEcCCCCEEECcch
Confidence 58999999999999887777888963
No 290
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.99 E-value=0.037 Score=46.25 Aligned_cols=26 Identities=23% Similarity=0.300 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...|+|++
T Consensus 135 ~i~H~dL~p~Nili~~~~~~kl~dfg 160 (296)
T cd06655 135 QVIHRDIKSDNVLLGMDGSVKLTDFG 160 (296)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCc
Confidence 57999999999999888778899963
No 291
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=95.98 E-value=0.04 Score=45.53 Aligned_cols=27 Identities=30% Similarity=0.372 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||+++.++...|+|+.
T Consensus 127 ~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 127 LKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred CCeeccCCCHHHEEEccCCcEEEeecc
Confidence 358999999999999887777889963
No 292
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.93 E-value=0.033 Score=47.19 Aligned_cols=28 Identities=29% Similarity=0.375 Sum_probs=23.4
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~ 164 (240)
...+||+|+++.|||++. ++..-|-||.
T Consensus 135 s~g~vH~DiK~~NiLl~~~~~~~KlaDFG 163 (313)
T KOG0198|consen 135 SKGIVHCDIKPANILLDPSNGDVKLADFG 163 (313)
T ss_pred hCCEeccCcccceEEEeCCCCeEEeccCc
Confidence 447999999999999998 5667788874
No 293
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=95.91 E-value=0.017 Score=47.02 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 117 ~i~H~dl~p~nil~~~~~~~~l~dfg 142 (260)
T cd05611 117 GIIHRDIKPENLLIDQTGHLKLTDFG 142 (260)
T ss_pred CeecCCCCHHHeEECCCCcEEEeecc
Confidence 58999999999999887777889963
No 294
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=95.90 E-value=0.037 Score=45.00 Aligned_cols=26 Identities=27% Similarity=0.176 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 122 ~i~H~dl~p~ni~i~~~~~~~l~dfg 147 (260)
T cd05067 122 NYIHRDLRAANILVSETLCCKIADFG 147 (260)
T ss_pred CeecccccHHhEEEcCCCCEEEccCc
Confidence 58999999999999988777889963
No 295
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=95.90 E-value=0.044 Score=44.34 Aligned_cols=26 Identities=31% Similarity=0.456 Sum_probs=21.2
Q ss_pred ceeccCCCCCCeeecCCC-------CeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNG-------EPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~-------~~~iiD~~ 164 (240)
.++|+|++|.||+++.++ ...+.|+.
T Consensus 121 ~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 589999999999998765 35688853
No 296
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=95.90 E-value=0.042 Score=44.57 Aligned_cols=26 Identities=23% Similarity=0.204 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 115 ~i~H~di~p~nili~~~~~~kl~df~ 140 (257)
T cd05060 115 HFVHRDLAARNVLLVNRHQAKISDFG 140 (257)
T ss_pred CeeccCcccceEEEcCCCcEEecccc
Confidence 48999999999999888777889963
No 297
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=95.90 E-value=0.025 Score=48.05 Aligned_cols=26 Identities=31% Similarity=0.324 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||+++.++...+.|+.
T Consensus 139 ~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 139 YFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred CeecccccHHHeEECCCCCEEECCcc
Confidence 58999999999999888777788963
No 298
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.88 E-value=0.026 Score=46.77 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++++||+++.++...++|+.
T Consensus 125 ~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 125 KIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred CcccCCCCHHHEEEecCCeEEEeecc
Confidence 58999999999999887777899963
No 299
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=95.85 E-value=0.031 Score=44.94 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|+.
T Consensus 120 ~~~~h~dl~p~ni~i~~~~~~~l~d~~ 146 (260)
T cd06606 120 NGIVHRDIKGANILVDSDGVVKLADFG 146 (260)
T ss_pred CCccccCCCHHHEEEcCCCCEEEcccc
Confidence 358999999999999987778899963
No 300
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=95.83 E-value=0.046 Score=46.11 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||+++.++...|+|+.
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg 170 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFG 170 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCC
Confidence 58999999999999888778899963
No 301
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=95.83 E-value=0.045 Score=45.37 Aligned_cols=26 Identities=23% Similarity=0.290 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++...++|+.
T Consensus 135 ~i~H~dl~p~Nil~~~~~~~~l~d~g 160 (285)
T cd06648 135 GVIHRDIKSDSILLTSDGRVKLSDFG 160 (285)
T ss_pred CeecCCCChhhEEEcCCCcEEEcccc
Confidence 58999999999999988778899963
No 302
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=95.83 E-value=0.032 Score=46.30 Aligned_cols=26 Identities=31% Similarity=0.196 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-+.|+.
T Consensus 150 ~i~H~dlkp~Nili~~~~~~~l~dfg 175 (296)
T cd05051 150 NFVHRDLATRNCLVGKNYTIKIADFG 175 (296)
T ss_pred CccccccchhceeecCCCceEEcccc
Confidence 58999999999999888777788963
No 303
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=95.83 E-value=0.029 Score=45.38 Aligned_cols=26 Identities=35% Similarity=0.316 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++..-++|+.
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~ 146 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFG 146 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeecc
Confidence 58999999999999887777899963
No 304
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=95.79 E-value=0.036 Score=45.64 Aligned_cols=26 Identities=27% Similarity=0.317 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...++|+.
T Consensus 119 ~i~H~dl~p~ni~~~~~~~~~l~dfg 144 (286)
T cd07832 119 GIMHRDLKPANLLISADGVLKIADFG 144 (286)
T ss_pred CeecCCcCHHHEEEcCCCcEEEeeee
Confidence 58999999999999887777899963
No 305
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=95.79 E-value=0.029 Score=46.88 Aligned_cols=26 Identities=23% Similarity=0.262 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||+++.++...|+|+.
T Consensus 137 ~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 137 GVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred CeecCCCCHHHeEEccCCcEEEeech
Confidence 48999999999999988878899963
No 306
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=95.78 E-value=0.031 Score=54.38 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~-~~~~~~vme~l~G~~ 45 (240)
+..|+.+|+.|.. -.+.+++...... .+..|+||||++|..
T Consensus 59 ~~~EI~IL~~L~H---PNIVrl~d~f~de~~~~lyIVMEY~~gGS 100 (1021)
T PTZ00266 59 LVIEVNVMRELKH---KNIVRYIDRFLNKANQKLYILMEFCDAGD 100 (1021)
T ss_pred HHHHHHHHHHcCC---CCcCeEEEEEEecCCCEEEEEEeCCCCCc
Confidence 4568888887764 2234455433221 346799999999864
No 307
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=95.77 E-value=0.033 Score=45.35 Aligned_cols=26 Identities=27% Similarity=0.175 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 122 ~i~H~dl~p~ni~i~~~~~~~l~d~~ 147 (260)
T cd05073 122 NYIHRDLRAANILVSASLVCKIADFG 147 (260)
T ss_pred CccccccCcceEEEcCCCcEEECCCc
Confidence 58999999999999888777788963
No 308
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=95.74 E-value=0.035 Score=45.74 Aligned_cols=25 Identities=36% Similarity=0.405 Sum_probs=22.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|||++|.||++++++...++|+
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeec
Confidence 5899999999999988877889996
No 309
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=95.74 E-value=0.026 Score=45.92 Aligned_cols=44 Identities=27% Similarity=0.345 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 118 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.....+.+-+..+ . ...|.+.|+|++|+||+..+++.++++|+.
T Consensus 131 ~if~gic~gL~~l-H--~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 131 WIFLGICRGLEAL-H--EKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred HHHHHHHHHHHHH-h--ccCCcccccCCCcceeEecCCCceEEEecc
Confidence 3334444444433 2 346679999999999999887889999964
No 310
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=95.74 E-value=0.0067 Score=51.14 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=28.5
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC-C-CCCchhh
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 172 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~-~~Gd~~~ 172 (240)
.-.++|+||+|.|+|++++|..-++||. + .++-|.-
T Consensus 138 ~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~ 175 (323)
T KOG0594|consen 138 SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR 175 (323)
T ss_pred hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc
Confidence 3479999999999999998888899974 3 3554444
No 311
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=95.74 E-value=0.064 Score=47.26 Aligned_cols=44 Identities=25% Similarity=0.281 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCC---CeEEEccC
Q 026343 118 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG---EPVILDPA 164 (240)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~---~~~iiD~~ 164 (240)
..+..++..+. +|.+ ..|-+||=||+|||||..++. ..-|-||.
T Consensus 572 SIiMQiVnAL~-YLNE--ikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 572 SIIMQIVNALK-YLNE--IKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred HHHHHHHHHHH-HHhc--cCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 44455555543 5543 577799999999999986553 24466753
No 312
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=95.70 E-value=0.064 Score=44.37 Aligned_cols=27 Identities=26% Similarity=0.134 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 149 ~~i~H~dl~p~nil~~~~~~~~l~dfg 175 (288)
T cd05050 149 RKFVHRDLATRNCLVGENMVVKIADFG 175 (288)
T ss_pred CCeecccccHhheEecCCCceEECccc
Confidence 369999999999999888777889963
No 313
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=95.70 E-value=0.037 Score=45.83 Aligned_cols=26 Identities=31% Similarity=0.349 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-++|+.
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg 148 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFG 148 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccc
Confidence 58999999999999988878899963
No 314
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=95.69 E-value=0.046 Score=45.39 Aligned_cols=27 Identities=30% Similarity=0.257 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLG 147 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeecc
Confidence 468999999999999888778899963
No 315
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.69 E-value=0.053 Score=48.84 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeecc
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 42 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~ 42 (240)
|..|...|..|..+ ..|=++|.+... ++.-|||||+=+
T Consensus 406 y~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE~Gd 443 (677)
T KOG0596|consen 406 YRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVMECGD 443 (677)
T ss_pred HHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEeeccc
Confidence 56899999999985 677778888766 788999999853
No 316
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=95.68 E-value=0.035 Score=45.72 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=22.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|+++.||++++++..-|.|+
T Consensus 120 ~i~H~dl~~~ni~~~~~~~~kl~d~ 144 (288)
T cd07833 120 NIIHRDIKPENILVSESGVLKLCDF 144 (288)
T ss_pred CeecCCCCHHHeEECCCCCEEEEee
Confidence 5899999999999988777788995
No 317
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=95.68 E-value=0.037 Score=44.90 Aligned_cols=26 Identities=31% Similarity=0.318 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++++||++++++...|.|+.
T Consensus 119 ~i~H~dl~~~nil~~~~~~~kl~d~g 144 (264)
T cd06626 119 GIVHRDIKPANIFLDHNGVIKLGDFG 144 (264)
T ss_pred CcccCCCCHHHEEECCCCCEEEcccc
Confidence 48999999999999987777899963
No 318
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=95.68 E-value=0.077 Score=45.29 Aligned_cols=28 Identities=29% Similarity=0.388 Sum_probs=25.0
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..-+||+|++|.|||++..|++-|.||.
T Consensus 197 ~~~IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 197 ERKIIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred ccCeeeccCCHHHeeeccCCCEEecccc
Confidence 4679999999999999998888899975
No 319
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=95.65 E-value=0.093 Score=44.20 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||++++++..-++|+.
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecC
Confidence 58999999999999888778899963
No 320
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=95.61 E-value=0.03 Score=46.12 Aligned_cols=26 Identities=27% Similarity=0.314 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...+.|+.
T Consensus 120 ~i~H~~l~p~nill~~~~~~~l~dfg 145 (284)
T cd07860 120 RVLHRDLKPQNLLINTEGAIKLADFG 145 (284)
T ss_pred CeecCCCCHHHEEECCCCCEEEeecc
Confidence 58999999999999988878889963
No 321
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=95.61 E-value=0.071 Score=43.55 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=21.3
Q ss_pred ceeccCCCCCCeeecC-CCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDK-NGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~-~~~~~iiD~~ 164 (240)
.++|+|++|.||+++. ++...|+|+.
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecch
Confidence 5899999999999976 3457788863
No 322
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=95.59 E-value=0.02 Score=50.03 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=44.4
Q ss_pred CCCcceeccCCCCCCeeecCC-CCeEEEc---c-CCCCCchhhhhHhh--hh------cCCC--------HHHHHHhhhc
Q 026343 135 NVEPCLLHGDLWSGNISSDKN-GEPVILD---P-ACYYGHNEAEFGMS--WC------AGFG--------GSFYNSYFEV 193 (240)
Q Consensus 135 ~~~p~lvHgDl~~~Nvlv~~~-~~~~iiD---~-~~~~Gd~~~Dla~~--~~------~~~~--------~~~~~~Y~~~ 193 (240)
...+|+++||+|.+|+-.-.+ ....|+| | ++.+|++++||-++ ++ .+++ ..|.++|.+.
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~~ 119 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYREA 119 (385)
T ss_pred CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999877544 3356777 6 47899999999865 21 2443 4788888875
No 323
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.57 E-value=0.034 Score=46.97 Aligned_cols=48 Identities=13% Similarity=0.032 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCCchHHHHHHHHHHHhhcC
Q 026343 4 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 64 (240)
Q Consensus 4 ~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~~~~~~lg~~La~lH~~~ 64 (240)
+|.+.+..-..+ ..+=+++.+-+. +...|+|||.+.|.+ +|..+|...
T Consensus 124 REVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGp----------lLshI~~~~ 171 (463)
T KOG0607|consen 124 REVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGP----------LLSHIQKRK 171 (463)
T ss_pred HHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCch----------HHHHHHHhh
Confidence 455655555543 334455555543 578999999999976 577777643
No 324
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=95.57 E-value=0.089 Score=48.59 Aligned_cols=26 Identities=31% Similarity=0.432 Sum_probs=19.5
Q ss_pred ceeccCCCCCCeeecCC--CCe--EEEccC
Q 026343 139 CLLHGDLWSGNISSDKN--GEP--VILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~--~~~--~iiD~~ 164 (240)
.+||+|++|+||+...+ |.. -++|+.
T Consensus 140 ~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 140 GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 58999999999998654 222 388863
No 325
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=95.57 E-value=0.024 Score=45.98 Aligned_cols=26 Identities=31% Similarity=0.383 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...++|+.
T Consensus 120 ~i~h~dl~~~nil~~~~~~~~l~d~~ 145 (258)
T cd05578 120 GIIHRDIKPDNILLDEQGHVHITDFN 145 (258)
T ss_pred CeeccCCCHHHeEEcCCCCEEEeecc
Confidence 48999999999999988888899963
No 326
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=95.54 E-value=0.083 Score=43.20 Aligned_cols=19 Identities=32% Similarity=0.553 Sum_probs=16.0
Q ss_pred cceeccCCCCCCeeecCCC
Q 026343 138 PCLLHGDLWSGNISSDKNG 156 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~ 156 (240)
..++|+|++|.||+++.++
T Consensus 124 ~~ivH~dlkp~Nill~~~~ 142 (262)
T cd05077 124 KDLVHGNVCTKNILLAREG 142 (262)
T ss_pred CCeECCCCCcccEEEecCC
Confidence 3589999999999997554
No 327
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=95.53 E-value=0.072 Score=43.80 Aligned_cols=26 Identities=31% Similarity=0.360 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++++||++++++..-|+|+.
T Consensus 127 ~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 127 RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred CeeeccCChhhEEEccCCCEEEeccC
Confidence 58999999999999988778899963
No 328
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=95.43 E-value=0.04 Score=46.76 Aligned_cols=25 Identities=12% Similarity=0.152 Sum_probs=20.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|++|.||+++.++...+.|+
T Consensus 121 ~ivHrDlkp~Nill~~~~~~~~~~~ 145 (328)
T cd08226 121 GYIHRNIKASHILISGDGLVSLSGL 145 (328)
T ss_pred CeecCCCCHHHEEEeCCCcEEEech
Confidence 5899999999999987776666663
No 329
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=95.36 E-value=0.057 Score=43.91 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=16.0
Q ss_pred ceeccCCCCCCeeecCCC
Q 026343 139 CLLHGDLWSGNISSDKNG 156 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~ 156 (240)
.++|+|++|.||+++.++
T Consensus 120 ~iiH~dlkp~nili~~~~ 137 (258)
T cd05078 120 GLTHGNVCAKNVLLIREE 137 (258)
T ss_pred CeecCCCccceEEEeccc
Confidence 589999999999997664
No 330
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=95.33 E-value=0.089 Score=43.19 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
.++|+|++|.||+++.++ ...|+|+.
T Consensus 129 ~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 129 NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 489999999999998876 67899963
No 331
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.29 E-value=0.066 Score=43.67 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...|.|+.
T Consensus 126 ~i~H~dl~p~ni~i~~~~~~~l~dfg 151 (264)
T cd06653 126 MIVHRDIKGANILRDSAGNVKLGDFG 151 (264)
T ss_pred CEecCCCCHHHEEEcCCCCEEECccc
Confidence 58999999999999887777888963
No 332
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=95.26 E-value=0.061 Score=43.40 Aligned_cols=26 Identities=38% Similarity=0.298 Sum_probs=20.9
Q ss_pred ceeccCCCCCCeeecCCCC-eEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGE-PVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~-~~iiD~~ 164 (240)
.++|||+++.||++++++. +.+.|+.
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 5899999999999976543 4688864
No 333
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=95.20 E-value=0.079 Score=43.95 Aligned_cols=38 Identities=18% Similarity=0.126 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 43 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G 43 (240)
+..|++.++.+.. -.+++++..... .+..|+|||++++
T Consensus 48 ~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 85 (294)
T PLN00009 48 AIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFEYLDL 85 (294)
T ss_pred HHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEecccc
Confidence 3467777877753 346667776654 5689999999965
No 334
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=95.18 E-value=0.12 Score=41.69 Aligned_cols=26 Identities=38% Similarity=0.224 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++..-++|++
T Consensus 123 ~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 123 KILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred CcccCCCCcceEEEecCCcEEEeecc
Confidence 57999999999999987777899963
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=95.16 E-value=0.041 Score=46.77 Aligned_cols=26 Identities=27% Similarity=0.274 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-|.|+.
T Consensus 127 ~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 127 NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred CeecCCCCHHHEEEcCCCcEEecccc
Confidence 58999999999999988877888863
No 336
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=95.10 E-value=0.054 Score=53.00 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 4 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 4 ~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
.|++.|+.+.. -.+.+++.+... .+..|+||||++|..+
T Consensus 732 ~~~~~l~~l~H---pnIv~~~~~~~~-~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 732 SEIADMGKLQH---PNIVKLIGLCRS-EKGAYLIHEYIEGKNL 770 (968)
T ss_pred HHHHHHhhCCC---CCcceEEEEEEc-CCCCEEEEeCCCCCcH
Confidence 45555555532 346667776654 5678999999998653
No 337
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=95.07 E-value=0.096 Score=43.62 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||+++.++...|+|+.
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg 160 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFG 160 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCc
Confidence 58999999999999888778899963
No 338
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=95.07 E-value=0.045 Score=44.23 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|+..++.+.. -.+++++..... .+..+++||+++|..
T Consensus 46 ~~~E~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 85 (257)
T cd08225 46 SKKEVILLAKMKH---PNIVTFFASFQE-NGRLFIVMEYCDGGD 85 (257)
T ss_pred HHHHHHHHHhCCC---CChhhhhheecc-CCeEEEEEecCCCCc
Confidence 3467777777753 335556655443 568899999998865
No 339
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.02 E-value=0.098 Score=43.03 Aligned_cols=25 Identities=24% Similarity=0.215 Sum_probs=20.4
Q ss_pred ceeccCCCCCCeeecCCC---CeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNG---EPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~---~~~iiD~ 163 (240)
.++|+|++|.||+++.++ ...++|+
T Consensus 136 ~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 136 HFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred CEeecccchheEEEeccCCCcceEeccC
Confidence 589999999999998654 2568886
No 340
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=95.00 E-value=0.089 Score=42.81 Aligned_cols=26 Identities=27% Similarity=0.364 Sum_probs=21.4
Q ss_pred ceeccCCCCCCeeecCCCC-eEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGE-PVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~-~~iiD~~ 164 (240)
.++|+|+++.||+++.++. ..++|+.
T Consensus 123 ~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 123 QIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 5899999999999976653 6788863
No 341
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=94.99 E-value=0.087 Score=43.00 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++..-|.|+.
T Consensus 126 ~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 126 MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 48999999999999887777889963
No 342
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=94.96 E-value=0.077 Score=43.95 Aligned_cols=97 Identities=26% Similarity=0.360 Sum_probs=57.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc--CCC--CCchhhhhHhh--h-------h------cCCC---HHHH---HHhhhc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP--ACY--YGHNEAEFGMS--W-------C------AGFG---GSFY---NSYFEV 193 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~--~~~--~Gd~~~Dla~~--~-------~------~~~~---~~~~---~~Y~~~ 193 (240)
-+||+||+|.|||.+++....|-|| ++. -|-..-|+.-. . | .|++ +.+- =-|.-.
T Consensus 143 ~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 143 NIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred hhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence 4899999999999998877889995 443 67777777643 1 1 1221 1111 112221
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHHhhCC----CcHHHHHHHHHHHHH
Q 026343 194 MPKQPGFEKRRDLYMLYHYLNHYNLFGS----GYRSSALSIIDDYLR 236 (240)
Q Consensus 194 ~~~~~~~~~r~~~y~l~~~l~~~~~~g~----~~~~~~~~~~~~~~~ 236 (240)
.+- +.|+-|..+.+|...+.--.-|++ .+.+..++++.++|.
T Consensus 223 aGc-pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLq 268 (411)
T KOG0599|consen 223 AGC-PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQ 268 (411)
T ss_pred cCC-CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHe
Confidence 222 446677777777654433345554 344556777777664
No 343
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=94.94 E-value=0.18 Score=47.87 Aligned_cols=41 Identities=20% Similarity=0.056 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccC----CCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~----~~~~~~vme~l~G~~ 45 (240)
+.|+++|+.+..+ -.|++-|.++... ++.-|+||||+.|.+
T Consensus 63 E~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGS 107 (953)
T KOG0587|consen 63 ELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVMEFCGGGS 107 (953)
T ss_pred HHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEeeccCCcc
Confidence 6789999998874 6678877776442 468899999999864
No 344
>PHA02882 putative serine/threonine kinase; Provisional
Probab=94.73 E-value=0.023 Score=47.49 Aligned_cols=27 Identities=33% Similarity=0.416 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.|||+++++...|+||.
T Consensus 145 ~~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 145 HGISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 369999999999999887778899974
No 345
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=94.69 E-value=0.081 Score=46.99 Aligned_cols=35 Identities=29% Similarity=0.262 Sum_probs=27.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC-C-CCCchhh
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 172 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~-~~Gd~~~ 172 (240)
-.+||+||..-||||+++...-|=||. + ..+|-+|
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 358999999999999988766788973 4 3666555
No 346
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=94.60 E-value=0.022 Score=48.46 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCC-CCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKN-GEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~-~~~~iiD~~ 164 (240)
..+||+|++|.|+|||.+ +..-|.||.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCC
Confidence 689999999999999987 445689974
No 347
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=94.48 E-value=0.22 Score=40.74 Aligned_cols=24 Identities=21% Similarity=0.172 Sum_probs=21.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|++|.||++++ +..-|.|+
T Consensus 120 ~i~H~dl~p~ni~l~~-~~~kl~df 143 (282)
T cd07831 120 GIFHRDIKPENILIKD-DILKLADF 143 (282)
T ss_pred CceecccCHHHEEEcC-CCeEEEec
Confidence 5899999999999988 66788996
No 348
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=94.45 E-value=0.025 Score=44.95 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=25.5
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+-.++|+|.+|+|||++.+|.+-|.||.
T Consensus 166 ~kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 166 SKLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred HHhhhhhccCCcceEEEccCCcEEEcccc
Confidence 45578999999999999999989999974
No 349
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=94.41 E-value=0.029 Score=50.93 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=26.7
Q ss_pred CcceeccCCCCCCeeecCCC--CeEEEccC--CCCCchhh
Q 026343 137 EPCLLHGDLWSGNISSDKNG--EPVILDPA--CYYGHNEA 172 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~--~~~iiD~~--~~~Gd~~~ 172 (240)
.-.+||+||+|.|||..+-+ .+-||||. |+.+...+
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 44799999999999986533 35699973 45666555
No 350
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=94.11 E-value=0.034 Score=45.67 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=26.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC--CCCCch
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHN 170 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~--~~~Gd~ 170 (240)
--++|+|++|.|+|++++|..-|=||. +.+|.|
T Consensus 120 ~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 120 KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred hhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 358999999999999999988899973 357743
No 351
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.07 E-value=0.32 Score=43.50 Aligned_cols=26 Identities=38% Similarity=0.390 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
-.++|+|++..|||++.+|..-|=||
T Consensus 237 ~gvlHRDIK~SNiLidn~G~LKiaDF 262 (560)
T KOG0600|consen 237 RGVLHRDIKGSNILIDNNGVLKIADF 262 (560)
T ss_pred cCeeeccccccceEEcCCCCEEeccc
Confidence 46899999999999999888888887
No 352
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.05 E-value=0.032 Score=47.98 Aligned_cols=27 Identities=30% Similarity=0.332 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 142 ~~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 142 AGIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred CCcccCCCCHHHEEECCCCCEEEecCC
Confidence 368999999999999988878899964
No 353
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=93.93 E-value=0.23 Score=43.44 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
+..|.++|+.|..+ -.+=+++...+. ...-++|||.+.|..
T Consensus 82 v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL~~GGe 122 (382)
T KOG0032|consen 82 VRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMELCEGGE 122 (382)
T ss_pred HHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEecCCch
Confidence 57899999999863 122223333332 457899999999863
No 354
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=93.89 E-value=0.025 Score=45.75 Aligned_cols=26 Identities=35% Similarity=0.491 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|++
T Consensus 118 ~i~H~dikp~NIl~~~~~~~~l~Dfg 143 (260)
T PF00069_consen 118 GIVHRDIKPENILLDENGEVKLIDFG 143 (260)
T ss_dssp TEEESSBSGGGEEESTTSEEEESSGT
T ss_pred cccccccccccccccccccccccccc
Confidence 68999999999999977778899964
No 355
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=93.88 E-value=0.039 Score=47.38 Aligned_cols=27 Identities=30% Similarity=0.332 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|+||+++.++...|+|+.
T Consensus 138 ~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 138 AGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred CCcccCCCChHHEEECCCCCEEEeeCc
Confidence 468999999999999988878899963
No 356
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=93.85 E-value=0.037 Score=45.72 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=23.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|+||+++.++...|+|+.
T Consensus 127 ~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 127 NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred CCeecCCCCHHHEEECCCCCEEECccC
Confidence 369999999999999988878899963
No 357
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=93.79 E-value=0.42 Score=43.28 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecc-c-CCCceEEEEeeccCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGA-L-PTGGSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~-~-~~~~~~~vme~l~G~ 44 (240)
++.|.++|+.+.. |-++...- . ..+.-|+|||.+.|.
T Consensus 610 lR~EVaILq~l~H------PGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 610 LRNEVAILQNLHH------PGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HHHHHHHHHhcCC------CCeeEEEEeecCCceEEEEehhhcch
Confidence 5788888887764 44555431 1 157899999999996
No 358
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=93.73 E-value=0.044 Score=46.73 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 137 AGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CCeecccCChhhEEECCCCCEEEcCCc
Confidence 368999999999999988878899963
No 359
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=93.68 E-value=0.034 Score=47.09 Aligned_cols=26 Identities=31% Similarity=0.335 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++...|+|+.
T Consensus 116 givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 116 NIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred CeEeCCCCHHHeEECCCCcEEEeccC
Confidence 58999999999999888878899964
No 360
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=93.65 E-value=0.44 Score=40.68 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeecc
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 42 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~ 42 (240)
++-|++..+.|.. ..-+|.||.++++ .-...+||+.+.
T Consensus 70 LrdEYr~YKlL~g--~~GIP~vYYFGqe-G~~NiLVidLLG 107 (449)
T KOG1165|consen 70 LRDEYRTYKLLGG--TEGIPQVYYFGQE-GKYNILVIDLLG 107 (449)
T ss_pred HHHHHHHHHHHcC--CCCCCceeeeccc-cchhhhhhhhhC
Confidence 4679999999996 4678999999984 336688888773
No 361
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=93.64 E-value=0.046 Score=47.10 Aligned_cols=27 Identities=30% Similarity=0.332 Sum_probs=23.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...|+||.
T Consensus 145 ~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 145 AGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 368999999999999988878899964
No 362
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=93.57 E-value=0.85 Score=36.13 Aligned_cols=42 Identities=14% Similarity=0.039 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHH-hc--CCCCCccceeecccCCCceEEEEeeccCC
Q 026343 2 FEGEALGLGAMY-ET--RTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~-~~--~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
...|......+. .. ...++|+++++.++ +-+..+|+|.|...
T Consensus 58 ~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT-~~G~Glv~e~I~d~ 102 (199)
T PF10707_consen 58 NRRELRYYKQLSLRRGVDWSHIPRFYGFVET-NLGLGLVVELIRDA 102 (199)
T ss_pred HHHHHHHHHHHhhccCCcccccccEeEEEec-CCceEEEEEEEECC
Confidence 356777777777 43 35678999999877 44567999998653
No 363
>PHA03209 serine/threonine kinase US3; Provisional
Probab=93.56 E-value=0.047 Score=47.08 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+||+|++|.||+++.++...|+||.
T Consensus 177 ~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 177 RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred CeecCCCCHHHEEECCCCCEEEecCc
Confidence 69999999999999888778899974
No 364
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=93.51 E-value=0.048 Score=49.61 Aligned_cols=27 Identities=30% Similarity=0.308 Sum_probs=22.6
Q ss_pred cceeccCCCCCCeeec-CCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSD-KNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~-~~~~~~iiD~~ 164 (240)
..+|||||+|+|||++ +.+..-|+||.
T Consensus 434 ~gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 434 QGVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred cCeeecCCChhheeecCCCCcEEEEEec
Confidence 5899999999999995 55557899964
No 365
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=93.39 E-value=0.057 Score=41.94 Aligned_cols=38 Identities=26% Similarity=0.248 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
++.|+++|+.++.. --.|++|.++.. ++.|||++|.++
T Consensus 62 l~kEakiLeil~g~--~~~p~vy~yg~~-----~i~me~i~G~~L 99 (201)
T COG2112 62 LEKEAKILEILAGE--GVTPEVYFYGED-----FIRMEYIDGRPL 99 (201)
T ss_pred HHHHHHHHHHhhhc--CCCceEEEechh-----hhhhhhhcCcch
Confidence 68999999999974 567999999975 778999999764
No 366
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.37 E-value=0.18 Score=46.44 Aligned_cols=26 Identities=27% Similarity=0.251 Sum_probs=23.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.+|++||+.+|||.|.+|-.-|.||.
T Consensus 488 ~IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 488 GIIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred CceeeecchhheEEcccCcEEecccc
Confidence 58999999999999999878899973
No 367
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=93.35 E-value=0.054 Score=44.64 Aligned_cols=27 Identities=22% Similarity=0.127 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...|+|+.
T Consensus 143 ~gi~H~dlkp~Nil~~~~~~~kl~Dfg 169 (283)
T cd05091 143 HHVVHKDLATRNVLVFDKLNVKISDLG 169 (283)
T ss_pred cCccccccchhheEecCCCceEecccc
Confidence 368999999999999887778899964
No 368
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=93.29 E-value=0.059 Score=46.62 Aligned_cols=27 Identities=30% Similarity=0.331 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...|+|+.
T Consensus 122 ~~ivH~dlkp~Nili~~~~~~kL~Dfg 148 (372)
T cd07853 122 AGILHRDIKPGNLLVNSNCVLKICDFG 148 (372)
T ss_pred CCeeCCCCChHHEEECCCCCEEecccc
Confidence 368999999999999988878899963
No 369
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=93.19 E-value=0.049 Score=44.53 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 132 SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred CeeccccchhheEEcCCCCEEECCCC
Confidence 58999999999999887777899963
No 370
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=93.00 E-value=0.06 Score=45.33 Aligned_cols=26 Identities=27% Similarity=0.224 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 129 ~iiH~dlkp~Nill~~~~~~kl~DfG 154 (316)
T cd05108 129 RLVHRDLAARNVLVKTPQHVKITDFG 154 (316)
T ss_pred CeeccccchhheEecCCCcEEEcccc
Confidence 58999999999999887777899963
No 371
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=92.99 E-value=0.21 Score=40.42 Aligned_cols=25 Identities=36% Similarity=0.229 Sum_probs=20.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+.+.||+++++ ..-++|+.
T Consensus 126 ~i~h~~l~~~nili~~~-~~~l~d~g 150 (260)
T cd08222 126 RILHRDLKAKNIFLKNN-LLKIGDFG 150 (260)
T ss_pred CccccCCChhheEeecC-CEeecccC
Confidence 68999999999999754 47789964
No 372
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.95 E-value=0.58 Score=39.81 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHh-cCCCCCccceeecccCCCceEEEEeecc
Q 026343 2 FEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIMEFIE 42 (240)
Q Consensus 2 ~~~E~~~L~~l~~-~~~v~vP~v~~~~~~~~~~~~~vme~l~ 42 (240)
+..|..+|..+.. ..+..+|+++..+...+...|+||+.+.
T Consensus 63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G 104 (322)
T KOG1164|consen 63 LKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLG 104 (322)
T ss_pred chhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccC
Confidence 4578999999985 2256899999999522568899999874
No 373
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=92.94 E-value=0.055 Score=45.85 Aligned_cols=26 Identities=27% Similarity=0.276 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|+|+.
T Consensus 123 ~ivH~dlkp~NIll~~~~~~kL~Dfg 148 (338)
T cd07859 123 NVFHRDLKPKNILANADCKLKICDFG 148 (338)
T ss_pred CeecCCCCHHHeEECCCCcEEEccCc
Confidence 58999999999999988878899964
No 374
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=92.91 E-value=0.064 Score=44.13 Aligned_cols=26 Identities=27% Similarity=0.242 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...|+|+.
T Consensus 129 ~iiH~dlkp~Nil~~~~~~~kL~dfG 154 (279)
T cd05109 129 RLVHRDLAARNVLVKSPNHVKITDFG 154 (279)
T ss_pred CeeccccccceEEEcCCCcEEECCCC
Confidence 58999999999999887777888963
No 375
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.82 E-value=0.47 Score=43.90 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
.++|.-+|++|.+. +|=+.|..... ...-|+|.||++|..
T Consensus 59 IerEIviMkLi~Hp---nVl~LydVwe~-~~~lylvlEyv~gGE 98 (786)
T KOG0588|consen 59 IEREIVIMKLIEHP---NVLRLYDVWEN-KQHLYLVLEYVPGGE 98 (786)
T ss_pred hhhhhHHHHHhcCC---Ceeeeeeeecc-CceEEEEEEecCCch
Confidence 47899999999863 35555655543 457899999999853
No 376
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=92.81 E-value=0.075 Score=45.42 Aligned_cols=26 Identities=31% Similarity=0.216 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++.+.|+|+.
T Consensus 193 ~ivHrDikp~Nill~~~~~vkL~DfG 218 (337)
T cd05054 193 KCIHRDLAARNILLSENNVVKICDFG 218 (337)
T ss_pred CeecCCCCcceEEEeCCCcEEEeccc
Confidence 58999999999999987777899964
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=92.77 E-value=0.069 Score=42.96 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++...++|+.
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence 469999999999999988778889963
No 378
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=92.68 E-value=0.094 Score=43.10 Aligned_cols=28 Identities=21% Similarity=0.378 Sum_probs=23.9
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
...++|+|++|+||+++.++...|+|+.
T Consensus 122 ~~~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 122 KLSVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred cCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 3468999999999999888778899963
No 379
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=92.66 E-value=0.099 Score=43.13 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-++|+.
T Consensus 128 ~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 128 HRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred CCEeccccCcceEEEcCCCcEEEcCCc
Confidence 358999999999999887777889963
No 380
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=92.37 E-value=0.089 Score=42.69 Aligned_cols=27 Identities=22% Similarity=0.134 Sum_probs=22.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++..-|.|+.
T Consensus 114 ~~i~H~dlkp~nill~~~~~~kl~Dfg 140 (257)
T cd05116 114 TNFVHRDLAARNVLLVTQHYAKISDFG 140 (257)
T ss_pred CCEeecccchhhEEEcCCCeEEECCCc
Confidence 358999999999999887767788963
No 381
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=92.36 E-value=0.28 Score=43.52 Aligned_cols=73 Identities=18% Similarity=0.103 Sum_probs=47.6
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccC-C---CCCchhhhhHhh--hhcCCCHHHHHHhhhcCCCCcCHHHHHHHHHH
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGMS--WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYML 209 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~---~~Gd~~~Dla~~--~~~~~~~~~~~~Y~~~~~~~~~~~~r~~~y~l 209 (240)
.+|.++|+||+..||||.+|....|-||. + ..|-+.-|.+.= ...-+..+.++|=-+... .+--.|+++|.+
T Consensus 333 ~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d--~~Afkr~DvYam 410 (534)
T KOG3653|consen 333 HKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD--RDAFKRIDVYAM 410 (534)
T ss_pred CCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc--HHHHHHHHHHHH
Confidence 67899999999999999888766788863 3 244444444420 001134677777554432 444688888876
Q ss_pred H
Q 026343 210 Y 210 (240)
Q Consensus 210 ~ 210 (240)
-
T Consensus 411 g 411 (534)
T KOG3653|consen 411 G 411 (534)
T ss_pred H
Confidence 4
No 382
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.32 E-value=0.083 Score=43.73 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=27.2
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC-CCCCch
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN 170 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~~~Gd~ 170 (240)
...++|+|++|||+||+.+-+.-|.||. +...++
T Consensus 174 sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 174 TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 4578999999999999988778899974 444443
No 383
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=92.20 E-value=0.076 Score=48.10 Aligned_cols=27 Identities=30% Similarity=0.246 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++..-|+||.
T Consensus 162 ~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 162 KHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 468999999999999988878899974
No 384
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=92.06 E-value=0.091 Score=43.26 Aligned_cols=27 Identities=37% Similarity=0.416 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++++||+++.++...|+|+.
T Consensus 118 ~~i~H~dl~~~nil~~~~~~~~l~dfg 144 (284)
T cd07839 118 HNVLHRDLKPQNLLINKNGELKLADFG 144 (284)
T ss_pred CCEecCCCCHHHEEEcCCCcEEECccc
Confidence 368999999999999888777899963
No 385
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=91.95 E-value=0.099 Score=44.18 Aligned_cols=26 Identities=31% Similarity=0.325 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|+||++++++...++|+.
T Consensus 123 gi~H~dlkp~nili~~~~~~~L~dfg 148 (330)
T cd07834 123 NVIHRDLKPSNILVNSNCDLKICDFG 148 (330)
T ss_pred CeecCCCCHHHEEEcCCCCEEEcccC
Confidence 68999999999999988778888963
No 386
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=91.95 E-value=0.13 Score=42.68 Aligned_cols=26 Identities=27% Similarity=0.325 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++..-|+|+.
T Consensus 122 ~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 122 WILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred CeeecCCChhhEEEcCCCCEEEccce
Confidence 58999999999999988877899953
No 387
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=91.76 E-value=0.13 Score=41.50 Aligned_cols=26 Identities=27% Similarity=0.222 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...++|+.
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg 142 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFG 142 (257)
T ss_pred CccccccCcccEEEecCCEEEecccc
Confidence 68999999999999988777899964
No 388
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=91.74 E-value=0.11 Score=43.11 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=23.6
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|+.
T Consensus 134 ~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 134 HGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred CCEecCCCcHHHEEEcCCCCEEECccc
Confidence 469999999999999888778899963
No 389
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=91.67 E-value=0.17 Score=42.34 Aligned_cols=27 Identities=26% Similarity=0.222 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-|+|+.
T Consensus 128 ~~ivH~dikp~Nill~~~~~~kL~Dfg 154 (303)
T cd05110 128 RRLVHRDLAARNVLVKSPNHVKITDFG 154 (303)
T ss_pred cCeeccccccceeeecCCCceEEcccc
Confidence 368999999999999877767899963
No 390
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=91.65 E-value=0.087 Score=45.19 Aligned_cols=26 Identities=31% Similarity=0.341 Sum_probs=23.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...++|+.
T Consensus 138 gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 138 GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 68999999999999988878899963
No 391
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=91.65 E-value=0.11 Score=42.32 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 133 ~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 133 NFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred CeeccccchheEEECCCCeEEECCcc
Confidence 68999999999999887777899963
No 392
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=91.63 E-value=0.099 Score=44.38 Aligned_cols=27 Identities=33% Similarity=0.378 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|+||++++++...|+|+.
T Consensus 124 ~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 124 ANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred CCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 368999999999999988878899964
No 393
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=91.57 E-value=0.078 Score=45.86 Aligned_cols=84 Identities=15% Similarity=0.099 Sum_probs=45.3
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcc-CCCCCchhhhhHhh-----h-hcCCCHHHHHHhhhcCCCC----cCHHHHH
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-----W-CAGFGGSFYNSYFEVMPKQ----PGFEKRR 204 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~-~~~~Gd~~~Dla~~-----~-~~~~~~~~~~~Y~~~~~~~----~~~~~r~ 204 (240)
..--+-|.|++-+|||++ +|.+.+||| ++..-.+--++... + |.|.++--|+-|+..+.+. ..|+-+.
T Consensus 339 kkf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~g~wa~F~P~T 417 (488)
T COG5072 339 KKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPIT 417 (488)
T ss_pred hcCCcccccccccceeee-cCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhcCcHHhcccch
Confidence 445689999999999998 566899997 44322222222221 1 2343333345555443221 2234445
Q ss_pred HHHHHHHHHHHHHhhC
Q 026343 205 DLYMLYHYLNHYNLFG 220 (240)
Q Consensus 205 ~~y~l~~~l~~~~~~g 220 (240)
.++-||.+...+..++
T Consensus 418 NvlWL~yLs~~llkk~ 433 (488)
T COG5072 418 NVLWLYYLSHQLLKKK 433 (488)
T ss_pred hhHHHHHHHHHHHhhc
Confidence 5566655444444443
No 394
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=91.57 E-value=0.11 Score=42.73 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...++|+.
T Consensus 118 ~~~~H~dl~p~nil~~~~~~~~l~df~ 144 (283)
T cd07835 118 HRVLHRDLKPQNLLIDREGALKLADFG 144 (283)
T ss_pred CCeeCCCCCHHHEEEcCCCcEEEeecc
Confidence 368999999999999987778899963
No 395
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=91.51 E-value=0.12 Score=43.22 Aligned_cols=26 Identities=35% Similarity=0.363 Sum_probs=20.6
Q ss_pred ceeccCCCCCCeeec----CCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSD----KNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~----~~~~~~iiD~~ 164 (240)
.++|+|++|.||++. .++..-|+|+.
T Consensus 128 ~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 128 WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 589999999999994 33456799963
No 396
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=91.48 E-value=0.12 Score=44.13 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=25.2
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
....++|+||+|+|++++.+...-|.||+
T Consensus 142 HSAnViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 142 HSANVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred hcccccccccchhheeeccCCCEEecccc
Confidence 35689999999999999988778999974
No 397
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=91.47 E-value=0.13 Score=42.20 Aligned_cols=25 Identities=24% Similarity=0.153 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|||++++||++++++...|.|+
T Consensus 119 ~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 119 GFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred CcccCCCChhhEEEcCCCCEEEeec
Confidence 5899999999999998777888896
No 398
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=91.36 E-value=0.12 Score=42.43 Aligned_cols=27 Identities=26% Similarity=0.287 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|+.
T Consensus 117 ~~i~H~dl~p~nili~~~~~~~l~df~ 143 (283)
T cd05118 117 HGILHRDLKPENLLINTEGVLKLADFG 143 (283)
T ss_pred CCeeecCcCHHHEEECCCCcEEEeeee
Confidence 358999999999999987778899963
No 399
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=91.35 E-value=0.12 Score=47.66 Aligned_cols=27 Identities=26% Similarity=0.328 Sum_probs=22.5
Q ss_pred cceeccCCCCCCeeecCC-CCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKN-GEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~-~~~~iiD~~ 164 (240)
..++|+|++|.|||++.+ +...|+||.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG 301 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG 301 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence 469999999999999864 557899973
No 400
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.24 E-value=0.58 Score=39.10 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=21.2
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
+-.++|+|++|+||.++.+|++-+=|
T Consensus 146 r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 146 RGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred ccceeeccCcchheEEcCCCceeecc
Confidence 45699999999999999888655555
No 401
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=91.23 E-value=0.13 Score=41.69 Aligned_cols=27 Identities=22% Similarity=0.139 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 117 ~~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 117 KKFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred CCccccccCcceEEEcCCCcEEECCcc
Confidence 368999999999999887777788963
No 402
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=91.20 E-value=0.16 Score=42.09 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=23.2
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..-.++|+|.+|.|||+|..|..-+.||
T Consensus 209 eKH~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 209 EKHGVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred HhcceeecccCccceEEccCCCEEeecc
Confidence 4668999999999999998777666664
No 403
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=91.13 E-value=0.1 Score=43.42 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...|+|+.
T Consensus 138 ~ivH~dlkp~Nill~~~~~~kL~dfg 163 (292)
T cd06658 138 GVIHRDIKSDSILLTSDGRIKLSDFG 163 (292)
T ss_pred CEeecCCCHHHEEEcCCCCEEEccCc
Confidence 58999999999999888778899963
No 404
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=91.08 E-value=0.13 Score=41.75 Aligned_cols=26 Identities=31% Similarity=0.189 Sum_probs=22.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++..-++|+.
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~dfg 147 (260)
T cd05070 122 NYIHRDLRSANILVGDGLVCKIADFG 147 (260)
T ss_pred CcccCCCccceEEEeCCceEEeCCce
Confidence 58999999999999887767788963
No 405
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=91.07 E-value=0.13 Score=42.91 Aligned_cols=26 Identities=35% Similarity=0.390 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||++++++...++|+.
T Consensus 135 ~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 135 HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CeecCCCCHHHEEECCCCCEEECcCc
Confidence 68999999999999988878899963
No 406
>PTZ00284 protein kinase; Provisional
Probab=91.06 E-value=0.15 Score=45.77 Aligned_cols=19 Identities=32% Similarity=0.370 Sum_probs=16.5
Q ss_pred cceeccCCCCCCeeecCCC
Q 026343 138 PCLLHGDLWSGNISSDKNG 156 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~ 156 (240)
..+||+|++|+|||++.++
T Consensus 251 ~gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 251 LHLMHTDLKPENILMETSD 269 (467)
T ss_pred CCeecCCCCHHHEEEecCC
Confidence 4799999999999997654
No 407
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=91.03 E-value=0.14 Score=42.95 Aligned_cols=26 Identities=35% Similarity=0.363 Sum_probs=20.8
Q ss_pred ceeccCCCCCCeeec----CCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSD----KNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~----~~~~~~iiD~~ 164 (240)
.++|+|++|.|||+. .++..-|+|+.
T Consensus 128 ~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 128 WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 699999999999994 23456799963
No 408
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=90.89 E-value=0.12 Score=40.88 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+.+.||++++++...++|++
T Consensus 107 ~i~h~~i~~~ni~~~~~~~~~l~d~~ 132 (244)
T smart00220 107 GIIHRDLKPENILLDEDGHVKLADFG 132 (244)
T ss_pred CeecCCcCHHHeEECCCCcEEEcccc
Confidence 68999999999999988778899964
No 409
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=90.72 E-value=0.11 Score=42.32 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=23.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...|+|+.
T Consensus 131 ~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 131 KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCC
Confidence 58999999999999988778899964
No 410
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=90.69 E-value=0.18 Score=48.97 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=21.3
Q ss_pred CcceeccCCCCCCeeecCC-------CCeEEEccCC
Q 026343 137 EPCLLHGDLWSGNISSDKN-------GEPVILDPAC 165 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~-------~~~~iiD~~~ 165 (240)
...+||||++|+|+|.... ....||||.+
T Consensus 812 ~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 812 AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred hcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 3468999999999998632 1256899753
No 411
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=90.53 E-value=0.16 Score=42.75 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=31.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc--CC---CCCchhhhhHhh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP--AC---YYGHNEAEFGMS 177 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~--~~---~~Gd~~~Dla~~ 177 (240)
-.||+|++|.||+++..+++-+.|| +. ..|+-..|-...
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVAT 164 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVAT 164 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhh
Confidence 4899999999999999998899995 32 267888887765
No 412
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=90.51 E-value=0.21 Score=45.36 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 329 ~ivHrDLKp~NILl~~~~~~kL~DFG 354 (507)
T PLN03224 329 GIVHRDIKPENLLVTVDGQVKIIDFG 354 (507)
T ss_pred CeecCCCchHhEEECCCCcEEEEeCc
Confidence 58999999999999888778899973
No 413
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=90.50 E-value=0.14 Score=41.94 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++..-+.|+.
T Consensus 120 ~~~h~dl~p~nil~~~~~~~~l~d~g 145 (287)
T cd07840 120 GILHRDIKGSNILINNDGVLKLADFG 145 (287)
T ss_pred CceeccCcHHHeEEcCCCCEEEcccc
Confidence 58999999999999988777888853
No 414
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=90.49 E-value=0.17 Score=41.61 Aligned_cols=27 Identities=22% Similarity=0.291 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|+++.||++++++...|+|+.
T Consensus 140 ~~ivH~dl~~~nili~~~~~~~l~dfg 166 (282)
T cd06636 140 HKVIHRDIKGQNVLLTENAEVKLVDFG 166 (282)
T ss_pred CCcccCCCCHHHEEECCCCCEEEeeCc
Confidence 368999999999999988778899963
No 415
>PTZ00036 glycogen synthase kinase; Provisional
Probab=90.48 E-value=0.15 Score=45.38 Aligned_cols=27 Identities=26% Similarity=0.219 Sum_probs=22.1
Q ss_pred cceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
..+||+|++|.||+++.++ .+-|+||.
T Consensus 189 ~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 189 KFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 3699999999999998664 46799964
No 416
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=90.48 E-value=0.21 Score=40.39 Aligned_cols=31 Identities=39% Similarity=0.574 Sum_probs=26.6
Q ss_pred CCCcceeccCCCCCCeeecCCCCeEEEccCC
Q 026343 135 NVEPCLLHGDLWSGNISSDKNGEPVILDPAC 165 (240)
Q Consensus 135 ~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~ 165 (240)
...+..+|||.-|+|||.++.|-.-++||.+
T Consensus 159 ~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 159 SENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred ccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 4677899999999999999988788999643
No 417
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=90.37 E-value=0.18 Score=43.03 Aligned_cols=27 Identities=33% Similarity=0.500 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 137 AGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 368999999999999888778899963
No 418
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=90.24 E-value=0.13 Score=45.19 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=18.1
Q ss_pred eeccCCCCCCeeecCCC----CeEEEc
Q 026343 140 LLHGDLWSGNISSDKNG----EPVILD 162 (240)
Q Consensus 140 lvHgDl~~~Nvlv~~~~----~~~iiD 162 (240)
++|+|+|||||++.... ..+++|
T Consensus 366 FvHaDlHPGNVlirf~~t~~~~~~~~~ 392 (565)
T KOG1236|consen 366 FVHADLHPGNVLIRFNKTEDNLRGVHK 392 (565)
T ss_pred ceecccCCCcEEEEecCCCcccccccc
Confidence 89999999999996532 256776
No 419
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=90.20 E-value=0.23 Score=41.53 Aligned_cols=27 Identities=26% Similarity=0.287 Sum_probs=23.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|.|+.
T Consensus 134 ~~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 134 HERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred CCceecCCCcccEEECCCCCEEEeecC
Confidence 358999999999999988878888863
No 420
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=90.18 E-value=0.17 Score=41.86 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=22.9
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++..-|+|+.
T Consensus 126 ~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 126 WILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred CeeeccCCHHHEEECCCCcEEEeecC
Confidence 58999999999999988778899963
No 421
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=90.10 E-value=0.2 Score=45.05 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.6
Q ss_pred CcceeccCCCCCCeeecCCCC-eEEEccC-C-CCCch
Q 026343 137 EPCLLHGDLWSGNISSDKNGE-PVILDPA-C-YYGHN 170 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~-~~iiD~~-~-~~Gd~ 170 (240)
.-.++|.|++|+||||+.+.. .-|+||. + +.|+.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en 590 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN 590 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccccccc
Confidence 447899999999999987653 4699974 3 45553
No 422
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=89.93 E-value=0.16 Score=43.37 Aligned_cols=26 Identities=35% Similarity=0.515 Sum_probs=23.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||++++++...++|+.
T Consensus 137 ~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 137 GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 58999999999999988878899964
No 423
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=89.84 E-value=0.17 Score=39.61 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=23.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|+++.||++++++...++|+.
T Consensus 118 ~i~h~di~~~ni~v~~~~~~~l~d~g 143 (225)
T smart00221 118 GIVHRDLKPENILLGMDGLVKLADFG 143 (225)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeeCc
Confidence 78999999999999988778899964
No 424
>PHA00451 protein kinase
Probab=89.80 E-value=0.24 Score=40.78 Aligned_cols=31 Identities=35% Similarity=0.566 Sum_probs=24.0
Q ss_pred eeccCCCCCCeeecCCCCeEEEccCCCCCch
Q 026343 140 LLHGDLWSGNISSDKNGEPVILDPACYYGHN 170 (240)
Q Consensus 140 lvHgDl~~~Nvlv~~~~~~~iiD~~~~~Gd~ 170 (240)
+--=|.|+||||+++++.+.|-||-++..|.
T Consensus 190 IASFDmHSGNiMf~~~g~p~ITDPVSFS~dr 220 (362)
T PHA00451 190 IASFDMHSGNIMFDQDGVPYITDPVSFSHDR 220 (362)
T ss_pred hhcccccCCceeeCCCCCeEecCCccccCcc
Confidence 3445999999999999989999975544443
No 425
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=89.68 E-value=0.44 Score=46.94 Aligned_cols=26 Identities=31% Similarity=0.240 Sum_probs=23.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++||+||+|.||..++++.+-|.||
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDF 741 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDF 741 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeeccc
Confidence 46999999999999998877889996
No 426
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=89.64 E-value=0.23 Score=44.18 Aligned_cols=27 Identities=22% Similarity=0.307 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..+||+|++|.|+|++++|.+-|=||.
T Consensus 229 QgiiHRDIKPsNLLl~~~g~VKIsDFG 255 (576)
T KOG0585|consen 229 QGIIHRDIKPSNLLLSSDGTVKISDFG 255 (576)
T ss_pred cCeeccccchhheEEcCCCcEEeeccc
Confidence 368999999999999998877899975
No 427
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=89.64 E-value=0.18 Score=42.93 Aligned_cols=26 Identities=31% Similarity=0.311 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|+|+.
T Consensus 126 ~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 126 NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred CeeccCCCHHHEEECCCCCEEECccc
Confidence 58999999999999888778888963
No 428
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=89.57 E-value=0.26 Score=41.21 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=21.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.+||+|++++||+++.++..-+.|+
T Consensus 121 ~ivH~dlk~~Nili~~~~~~kl~d~ 145 (314)
T cd08216 121 GFIHRSVKASHILLSGDGKVVLSGL 145 (314)
T ss_pred CeecCCCCcceEEEecCCceEEecC
Confidence 5899999999999988776777775
No 429
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.52 E-value=1.9 Score=39.45 Aligned_cols=25 Identities=32% Similarity=0.290 Sum_probs=21.1
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+||+.||++.+.+-.+-|=||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred CceecccchhheeecCcCcEEeccc
Confidence 4899999999999987755667776
No 430
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=89.35 E-value=0.23 Score=42.52 Aligned_cols=26 Identities=31% Similarity=0.420 Sum_probs=23.0
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||++++++...|+|+.
T Consensus 140 ~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 140 DIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred CeeecCCChHHEEEcCCCCEEEeccc
Confidence 58999999999999988878899963
No 431
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=89.26 E-value=0.25 Score=40.33 Aligned_cols=27 Identities=22% Similarity=0.211 Sum_probs=22.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 132 ~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 132 KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred CCEeecccchhhEEEcCCCCEEECccc
Confidence 369999999999999877767788963
No 432
>PLN00181 protein SPA1-RELATED; Provisional
Probab=89.25 E-value=0.37 Score=46.29 Aligned_cols=27 Identities=0% Similarity=0.022 Sum_probs=21.7
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
...++|+|++|.|||+++.+...++|+
T Consensus 98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~ 124 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSSFNHVSFIES 124 (793)
T ss_pred hCCeeeccCCchhEEEcccCcEEEeec
Confidence 346999999999999977666667775
No 433
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=89.15 E-value=3.9 Score=31.98 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 45 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~ 45 (240)
..|.-.|+.+... + ++|++++..- .+++.|+++..+
T Consensus 7 ~~E~lll~~l~~~-~-~~pk~lG~CG-----~~~v~E~~~~~~ 42 (188)
T PF12260_consen 7 NNEPLLLQLLQGS-E-PFPKLLGSCG-----RFYVVEYVGAGS 42 (188)
T ss_pred ccHHHHHHHcCCC-C-CCCCeeeECC-----CEEEEEeecCcc
Confidence 4588899999885 3 9999999973 489999998643
No 434
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=89.05 E-value=0.19 Score=42.11 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|+||+++.++..-|+|+.
T Consensus 128 ~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 128 FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccc
Confidence 58999999999999888777888963
No 435
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=88.97 E-value=0.25 Score=40.41 Aligned_cols=27 Identities=22% Similarity=0.089 Sum_probs=23.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|+.|.||+++.++..-|+|+.
T Consensus 138 ~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 138 KKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred CCccccccChheEEEcCCCCEEECCcc
Confidence 368999999999999988777788863
No 436
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=88.95 E-value=0.23 Score=41.23 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=22.3
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|||+++.||++++++..-|.|+
T Consensus 136 ~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 136 NFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred CeecCCCCHHHEEECCCCcEEeCcc
Confidence 6899999999999988877788885
No 437
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=88.94 E-value=0.31 Score=39.82 Aligned_cols=26 Identities=31% Similarity=0.372 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||+++.||++++++...|.|+.
T Consensus 118 ~i~H~~l~~~ni~~~~~~~~~l~d~g 143 (282)
T cd07829 118 RILHRDLKPQNILINRDGVLKLADFG 143 (282)
T ss_pred CcccCCCChheEEEcCCCCEEEecCC
Confidence 58999999999999887778899953
No 438
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=88.77 E-value=0.24 Score=41.52 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=22.7
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCC--CCCchh
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNE 171 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~--~~Gd~~ 171 (240)
...+||||+++.|++++.+|...+=|+.. ..|...
T Consensus 163 ~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~ 199 (288)
T PF14531_consen 163 SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY 199 (288)
T ss_dssp HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE
T ss_pred hcceEecccceeeEEEcCCCCEEEcChHHHeecCcee
Confidence 45799999999999999988777777642 366533
No 439
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=88.74 E-value=0.26 Score=41.92 Aligned_cols=27 Identities=30% Similarity=0.297 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||+++.++..-|+|+.
T Consensus 127 ~~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 127 ANVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred CCEecCCCCHHHEEEcCCCCEEECcCc
Confidence 368999999999999888778899964
No 440
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=88.56 E-value=0.33 Score=44.25 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=29.9
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC--CCCCchhhhhH
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEAEFG 175 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~--~~~Gd~~~Dla 175 (240)
...+||+|++..||+++.+|-+-+|||. ++.-..-+|.-
T Consensus 688 ~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f 728 (772)
T KOG1152|consen 688 DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVF 728 (772)
T ss_pred ccCceecccccccEEEecCCeEEEeeccchhhhcCCCccee
Confidence 4579999999999999998888899973 34444445544
No 441
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=88.49 E-value=0.24 Score=41.38 Aligned_cols=26 Identities=35% Similarity=0.265 Sum_probs=22.1
Q ss_pred ceeccCCCCCCeeecC----CCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDK----NGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~----~~~~~iiD~~ 164 (240)
.++|+|++|.||+++. ++...++|+.
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 5899999999999988 5667788963
No 442
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=88.47 E-value=0.27 Score=41.99 Aligned_cols=27 Identities=33% Similarity=0.438 Sum_probs=23.4
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|||++|.||++++++...|+|+.
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 137 AGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred CCeecCCCCHHHeEECCCCCEEEcccc
Confidence 368999999999999988878899963
No 443
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=88.40 E-value=0.3 Score=41.45 Aligned_cols=27 Identities=30% Similarity=0.305 Sum_probs=23.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++...++|+.
T Consensus 127 ~~iiH~dl~p~Nili~~~~~~~l~dfg 153 (328)
T cd07856 127 AGVVHRDLKPSNILINENCDLKICDFG 153 (328)
T ss_pred CCcccCCCCHHHEeECCCCCEEeCccc
Confidence 358999999999999887777889964
No 444
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=88.36 E-value=0.23 Score=40.40 Aligned_cols=26 Identities=27% Similarity=0.297 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++...|+|+.
T Consensus 126 ~i~H~dlkp~nili~~~~~~~l~dfg 151 (267)
T cd06645 126 GKMHRDIKGANILLTDNGHVKLADFG 151 (267)
T ss_pred CeecCCCCHHHEEECCCCCEEECcce
Confidence 58999999999999887777888963
No 445
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=88.32 E-value=0.28 Score=41.65 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=23.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..++|+|++|.||++++++..-|+|+
T Consensus 126 ~~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 126 GNVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeec
Confidence 36899999999999998887789996
No 446
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=88.28 E-value=2 Score=39.37 Aligned_cols=71 Identities=21% Similarity=0.252 Sum_probs=40.9
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCC--CCCchhhhhHhhhhc--CC-CHHHHHHhhhcCCCCcCHHHHHHHHHH
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEAEFGMSWCA--GF-GGSFYNSYFEVMPKQPGFEKRRDLYML 209 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~--~~Gd~~~Dla~~~~~--~~-~~~~~~~Y~~~~~~~~~~~~r~~~y~l 209 (240)
.-.+||+||+..|++.+.+...-|-||+. ++-....+ ..+|+ .+ ..+++.|=....+--+-|..-..+|.|
T Consensus 173 ~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l--qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~L 248 (596)
T KOG0586|consen 173 SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML--QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYAL 248 (596)
T ss_pred hcceeccccchhhcccccccceeeeccccceeecccccc--cccCCCCCccChHhhcCcccCCcceehhhhhhhheee
Confidence 44799999999999998876677888532 22211111 11232 22 356666666554444455555555543
No 447
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=88.20 E-value=0.27 Score=41.22 Aligned_cols=26 Identities=27% Similarity=0.309 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|||++|.||+++.++..-+.|+.
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcc
Confidence 68999999999999887777788863
No 448
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=87.97 E-value=1 Score=41.31 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCC
Q 026343 117 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 155 (240)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~ 155 (240)
..+...++.-+. +|.. ..|-++|+||+.+||+|+++
T Consensus 146 k~W~RQILkGL~-yLHs--~~PPIIHRDLKCDNIFinG~ 181 (632)
T KOG0584|consen 146 KSWCRQILKGLV-YLHS--QDPPIIHRDLKCDNIFVNGN 181 (632)
T ss_pred HHHHHHHHHHhh-hhhc--CCCCccccccccceEEEcCC
Confidence 344444444443 4443 45678999999999999876
No 449
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=87.84 E-value=0.3 Score=40.07 Aligned_cols=27 Identities=26% Similarity=0.249 Sum_probs=22.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
..++|+|++|.||++++++..-|+|+.
T Consensus 136 ~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 136 RGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEeecccCHhhEEEcCCCcEEECCCC
Confidence 368999999999999887777888853
No 450
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=87.29 E-value=0.33 Score=40.37 Aligned_cols=26 Identities=31% Similarity=0.345 Sum_probs=22.7
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.++|+|++|.||+++.++..-|.|+.
T Consensus 139 ~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 139 KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CeeccCCCHHHEEECCCCcEEECcCC
Confidence 68999999999999888777788963
No 451
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=87.28 E-value=0.37 Score=39.90 Aligned_cols=26 Identities=27% Similarity=0.415 Sum_probs=22.5
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
-+||+|.+|.|||++..|.+-+.||.
T Consensus 188 kiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 188 KIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred hhhhccCChhheEEecCCCEeeeccc
Confidence 47999999999999887777888863
No 452
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=87.22 E-value=0.37 Score=39.06 Aligned_cols=29 Identities=17% Similarity=0.209 Sum_probs=24.1
Q ss_pred CCcceeccCCCCCCeeecCC-CCeEEEccC
Q 026343 136 VEPCLLHGDLWSGNISSDKN-GEPVILDPA 164 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~-~~~~iiD~~ 164 (240)
-.-++.|+|.+|.|||++.. +..-+|||.
T Consensus 149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred HhcCcccccCCcceeeechhhceeeeeecc
Confidence 34589999999999999875 457899974
No 453
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=87.21 E-value=4 Score=38.74 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 44 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~ 44 (240)
|++|++.|..|..- .|=+.++.... ++..+||+||+.-.
T Consensus 536 F~REaeLla~l~H~---nIVrLlGVC~~-~~P~~MvFEYm~~G 574 (774)
T KOG1026|consen 536 FRREAELLAELQHP---NIVRLLGVCRE-GDPLCMVFEYMDHG 574 (774)
T ss_pred HHHHHHHHHhccCC---CeEEEEEEEcc-CCeeEEEEEecccc
Confidence 78999999888763 35566666654 56789999999643
No 454
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=87.12 E-value=0.9 Score=39.63 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=23.1
Q ss_pred CCcceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 136 VEPCLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
..-.+||+|++|+|++++... .-.++||.
T Consensus 149 h~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 149 HKNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred hccCccccCCCccccccccccCCceEEech
Confidence 355899999999999997653 35799973
No 455
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=86.18 E-value=0.54 Score=41.40 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
..|.++|..+..+ -.+.+.+..... .+..+++|||++|.++
T Consensus 88 ~~E~~~l~~l~~H--~niv~~~~~~~~-~~~~~iv~E~~~~g~L 128 (401)
T cd05107 88 MSELKIMSHLGPH--LNIVNLLGACTK-GGPIYIITEYCRYGDL 128 (401)
T ss_pred HHHHHHHHhcCCC--CCeEEEEEEEcc-CCCcEEEEeccCCCcH
Confidence 4677888777543 235556665544 4678999999998765
No 456
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=85.84 E-value=0.55 Score=41.45 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=22.2
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
+-+-||+|++.||||++++|.+-+=||
T Consensus 144 ~~G~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 144 QNGHIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred hcCceecccccccEEEcCCCcEEEcCc
Confidence 346799999999999999887666664
No 457
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=85.80 E-value=0.42 Score=37.25 Aligned_cols=33 Identities=30% Similarity=0.397 Sum_probs=26.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC-C-CCCchh
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNE 171 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~-~-~~Gd~~ 171 (240)
-++|+|++|.|++++.+|+.-+-||. + .+|-|.
T Consensus 121 nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 57899999999999998888899973 3 477554
No 458
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=85.44 E-value=0.36 Score=40.81 Aligned_cols=36 Identities=28% Similarity=0.295 Sum_probs=23.7
Q ss_pred ceeccCCCCCCeeecCC----CCeEEEcc--CCCCCchhhhh
Q 026343 139 CLLHGDLWSGNISSDKN----GEPVILDP--ACYYGHNEAEF 174 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~----~~~~iiD~--~~~~Gd~~~Dl 174 (240)
=++|+||+|.||||..+ |.+-|=|. +..+.+|.--+
T Consensus 152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl 193 (438)
T KOG0666|consen 152 WVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPL 193 (438)
T ss_pred heeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccccc
Confidence 47899999999999887 33456663 22344444333
No 459
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=84.69 E-value=7.2 Score=34.97 Aligned_cols=57 Identities=21% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcceeccCCCCCCeeecCCCCeEEEccC-C---CCCchhhhhHhh
Q 026343 116 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGMS 177 (240)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~-~---~~Gd~~~Dla~~ 177 (240)
++..+-++++-+..+ -+-++-|+|++|.|||+.+...+-|=||. | .--+|..|-.-.
T Consensus 112 irnim~QilqGL~hi-----Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVST 172 (538)
T KOG0661|consen 112 IRNIMYQILQGLAHI-----HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVST 172 (538)
T ss_pred HHHHHHHHHHHHHHH-----HhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhc
Confidence 444445555544432 23479999999999999865556788863 3 234566665543
No 460
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=84.24 E-value=0.62 Score=39.46 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=23.1
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
...++|+||+|.||++..+...-|.||.
T Consensus 136 s~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 136 SAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hcceeecccCcccceecchhheeeccch
Confidence 4589999999999999877656688863
No 461
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.04 E-value=0.88 Score=40.23 Aligned_cols=33 Identities=36% Similarity=0.438 Sum_probs=25.4
Q ss_pred hhhcCCCCCcceeccCCCCCCeeecCCCCeEEEc
Q 026343 129 PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 162 (240)
Q Consensus 129 ~~l~~~~~~p~lvHgDl~~~Nvlv~~~~~~~iiD 162 (240)
+++.. ..+|.+-|+||+..||||.+++.-+|=|
T Consensus 327 eI~GT-qgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 327 EIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred HHhcC-CCCchhhccccccccEEEccCCcEEEee
Confidence 34433 4789999999999999998887545555
No 462
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=82.69 E-value=5.2 Score=35.80 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCC
Q 026343 3 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 46 (240)
Q Consensus 3 ~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~ 46 (240)
..|..+|..+.+ ++-|---|++.+ .+.-++||+-+.|..+
T Consensus 233 LnEk~iL~kV~s--~FiVslaYAfeT--kd~LClVLtlMNGGDL 272 (591)
T KOG0986|consen 233 LNEKQILEKVSS--PFIVSLAYAFET--KDALCLVLTLMNGGDL 272 (591)
T ss_pred hHHHHHHHHhcc--CcEEEEeeeecC--CCceEEEEEeecCCce
Confidence 467788888876 566766677765 5788999999999865
No 463
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=81.84 E-value=0.68 Score=38.09 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=23.1
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
+--++|+|.++.|||+++++..-+-||
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeecc
Confidence 345899999999999999887778886
No 464
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.71 E-value=0.84 Score=42.38 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=21.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
-+||+||+.||||++-+|.+-+-||
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADF 174 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADF 174 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecc
Confidence 5899999999999998887777775
No 465
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=80.72 E-value=1 Score=36.63 Aligned_cols=24 Identities=38% Similarity=0.563 Sum_probs=20.3
Q ss_pred eeccCCCCCCeeecCCCCeEEEcc
Q 026343 140 LLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 140 lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
++|||+++.||+++.++.+-|.|+
T Consensus 124 iiH~~l~~~nill~~~~~~Kl~~f 147 (259)
T PF07714_consen 124 IIHGNLSPSNILLDSNGQVKLSDF 147 (259)
T ss_dssp EEEST-SGGGEEEETTTEEEEEST
T ss_pred cccccccccccccccccccccccc
Confidence 899999999999998876778885
No 466
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=80.23 E-value=4.4 Score=37.84 Aligned_cols=25 Identities=24% Similarity=0.177 Sum_probs=21.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
-+||+||-.-|+||..+..+-|-||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeecc
Confidence 4899999999999987776678886
No 467
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=79.91 E-value=1.1 Score=41.11 Aligned_cols=27 Identities=30% Similarity=0.206 Sum_probs=22.3
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..-+||.||+..||+.++++.+.|-||
T Consensus 506 AK~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 506 AKNIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred hhhhhhhhccccceEEccCCcEEEecc
Confidence 346899999999999988766677776
No 468
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=78.90 E-value=2.1 Score=37.68 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=24.3
Q ss_pred CCcceeccCCCCCCeeec--CCCC--eEEEccCCCCCc
Q 026343 136 VEPCLLHGDLWSGNISSD--KNGE--PVILDPACYYGH 169 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~--~~~~--~~iiD~~~~~Gd 169 (240)
.+-.+-|+|++.+|||+. +|+. .+|-||.|+..|
T Consensus 358 ~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd 395 (598)
T KOG4158|consen 358 HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLAD 395 (598)
T ss_pred HHccchhhcccccceEEEecCCCCcEEEEcccceeeec
Confidence 345789999999999995 3333 467788665544
No 469
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=77.60 E-value=1.9 Score=34.20 Aligned_cols=29 Identities=31% Similarity=0.276 Sum_probs=22.6
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccCCCC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPACYY 167 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~ 167 (240)
++-=||-|++||+++++|...-||+...+
T Consensus 102 ilglgDRh~~NIli~~~G~v~hIDfg~~~ 130 (202)
T smart00146 102 ILGLGDRHNDNIMLDKTGHLFHIDFGFIL 130 (202)
T ss_pred HhcCCCCCCCcEEEeCCCCEEEEechhhh
Confidence 44558999999999977777889975433
No 470
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=77.50 E-value=10 Score=33.67 Aligned_cols=25 Identities=32% Similarity=0.250 Sum_probs=21.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.++|+|+++.||+.+.++.+-+=||
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDf 150 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDF 150 (426)
T ss_pred hhhcccchhhhhhccccCceeecch
Confidence 5799999999999998876667676
No 471
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=77.18 E-value=1.7 Score=39.35 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=23.5
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
.-.++|.|++.+|||...+|..-|.||
T Consensus 387 ~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 387 ARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred hcceeeeccccceeEeccCCcEEEeee
Confidence 347999999999999998887788885
No 472
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=76.87 E-value=1.3 Score=40.90 Aligned_cols=25 Identities=28% Similarity=0.304 Sum_probs=20.4
Q ss_pred ceeccCCCCCCeeecCCCCeEEEcc
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
..||+|++.||||..+.|.+-+-||
T Consensus 146 ~~IHRDiKAGNILLse~g~VKLaDF 170 (948)
T KOG0577|consen 146 NRIHRDIKAGNILLSEPGLVKLADF 170 (948)
T ss_pred hHHhhhccccceEecCCCeeeeccc
Confidence 5799999999999987776555554
No 473
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.85 E-value=3.7 Score=34.79 Aligned_cols=66 Identities=17% Similarity=0.104 Sum_probs=43.2
Q ss_pred HhhhhcCCCCCcceeccCCCCCCeeecCC-CCeEE---EccC-CCCCchhhhhHhh--hh------cCCC--------HH
Q 026343 127 LAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVI---LDPA-CYYGHNEAEFGMS--WC------AGFG--------GS 185 (240)
Q Consensus 127 ~~~~l~~~~~~p~lvHgDl~~~Nvlv~~~-~~~~i---iD~~-~~~Gd~~~Dla~~--~~------~~~~--------~~ 185 (240)
.+..++ ..+.+++-||+|.||+---.+ ...++ =||+ +..|.+..|+..+ ++ .+++ +.
T Consensus 49 ~p~~lp--~~p~tw~cGD~HLgN~ga~~~~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~~L~d~d~~~~~~~ 126 (410)
T COG4320 49 WPWSLP--KTPFTWLCGDAHLGNFGAARNSKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSNGLNDADIEKAIKI 126 (410)
T ss_pred CccccC--CCCceEEecccccccchhhccCCCceEEEecccchhhccchHHHHHHHHHHHHHHhhccCCCchhHHHHHHH
Confidence 344443 356699999999999865333 22344 4574 6899999999975 21 1222 57
Q ss_pred HHHHhhhcC
Q 026343 186 FYNSYFEVM 194 (240)
Q Consensus 186 ~~~~Y~~~~ 194 (240)
|+++|....
T Consensus 127 ~v~~Y~~Aa 135 (410)
T COG4320 127 MVQAYKMAA 135 (410)
T ss_pred HHHHHHHhh
Confidence 899995443
No 474
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=76.62 E-value=0.96 Score=44.52 Aligned_cols=30 Identities=27% Similarity=0.127 Sum_probs=23.2
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccCC
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 165 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~ 165 (240)
.+..+||||++..|||++.=+-..+-||++
T Consensus 137 H~~gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 137 HKLGVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHcCccccccccceEEEeeechhhhhcccc
Confidence 356899999999999998655445778654
No 475
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=76.56 E-value=1.5 Score=38.55 Aligned_cols=28 Identities=32% Similarity=0.285 Sum_probs=23.6
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.-.++|+||+..|||.+.++..-|-||.
T Consensus 171 knrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred hccceecccchhheeecCCCCeeeeccc
Confidence 3468999999999999988877788863
No 476
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=76.55 E-value=1.1 Score=38.16 Aligned_cols=26 Identities=27% Similarity=0.205 Sum_probs=20.6
Q ss_pred ceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
.++|+|+++.||+++.++ ..-++|+.
T Consensus 134 givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 134 NVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred CcccCCCCHHHEEEcCCCceEEECCcc
Confidence 689999999999997544 35678863
No 477
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=73.63 E-value=2.4 Score=34.48 Aligned_cols=33 Identities=27% Similarity=0.173 Sum_probs=25.6
Q ss_pred CCcceeccCCCCCCeeecC-CCCeEEEccCCCCC
Q 026343 136 VEPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 168 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~G 168 (240)
...++-=||=|++|||++. +|...-||+...+|
T Consensus 134 ~~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~ 167 (235)
T cd05172 134 SHWILGIGDRHLSNFLVDLETGGLVGIDFGHAFG 167 (235)
T ss_pred HhheeeccCCCcccEEEECCCCcEEEEeeHhhhc
Confidence 4557778999999999984 57788899764443
No 478
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=73.44 E-value=5.7 Score=35.79 Aligned_cols=60 Identities=20% Similarity=0.139 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC----------------chHHHHHHHHHHHhhcCC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR----------------GNQSVFGKKLAEMHKAGK 65 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~----------------~~~~~lg~~La~lH~~~~ 65 (240)
|..|+++|+.+.. -.|=+.|+.... ....++|||+++|..+. ....++++-|+-||+...
T Consensus 208 ~m~EArvMr~l~H---~NVVr~yGVa~~-~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~ 283 (474)
T KOG0194|consen 208 FMKEARVMRQLNH---PNVVRFYGVAVL-EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC 283 (474)
T ss_pred HHHHHHHHHhCCC---CCEEEEEEEEcC-CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC
Confidence 4679999998764 335556665543 45779999999998752 134678888888998653
No 479
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=72.36 E-value=2.4 Score=40.43 Aligned_cols=27 Identities=30% Similarity=0.245 Sum_probs=20.0
Q ss_pred cceeccCCCCCCeeecC---CC-C-eEEEccC
Q 026343 138 PCLLHGDLWSGNISSDK---NG-E-PVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~---~~-~-~~iiD~~ 164 (240)
--+||+||+|.|||+.. ++ . +.|-|+.
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEecccc
Confidence 46899999999999986 23 2 3466763
No 480
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=71.92 E-value=2.6 Score=35.47 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=25.4
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
..+|==||=|.+|||++.+|...=|||...+|
T Consensus 140 ~YvLGigDRH~~NILi~~~G~liHIDFG~~fg 171 (293)
T cd05168 140 CYLLQIKDRHNGNILIDNDGHIIHIDFGFMLS 171 (293)
T ss_pred HHHhhccccCCCceEEcCCCCEEEEehHHhhc
Confidence 44666799999999999888888999754443
No 481
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=71.55 E-value=3.1 Score=38.81 Aligned_cols=28 Identities=32% Similarity=0.270 Sum_probs=24.8
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
.-++.|.|++++|+++..++..-|+|+.
T Consensus 438 ~~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 438 SMGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred hcCceeccCccccEEEecCCceEEeecC
Confidence 4589999999999999998888899974
No 482
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=70.76 E-value=2.5 Score=36.58 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=26.0
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
..+|==||=|.+|||++.+|...=|||+..+|
T Consensus 202 ~YiLgigDRH~~NILi~~~G~~~HIDFG~ilg 233 (352)
T cd00891 202 TYVLGIGDRHNDNIMLTKTGHLFHIDFGHFLG 233 (352)
T ss_pred HHHccccccCCCceEECCCCCEEEEehHHhhc
Confidence 44667799999999999888888999765554
No 483
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=69.69 E-value=3.3 Score=33.24 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=24.8
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~G 168 (240)
..++-=||=|++|||++. +|...-||+...+|
T Consensus 127 ~YilglgDRh~~NIli~~~~G~~~hIDfg~~~~ 159 (219)
T cd00142 127 GYILGIGDRHPDNIMIDLDTGKLFHIDFGFIFG 159 (219)
T ss_pred HHHhccCCCCCccEEEECCCCeEEEEeeHHhhC
Confidence 446677999999999998 67778899754333
No 484
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=69.63 E-value=3.3 Score=35.15 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=24.4
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~G 168 (240)
..++==||-|++|||++. .|...-||+...++
T Consensus 208 ~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~ 240 (307)
T cd05170 208 GYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFE 240 (307)
T ss_pred HHHccCCCCCCccEEEEcCCCcEEEEeeHhhhc
Confidence 446667999999999984 56778899765443
No 485
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=69.25 E-value=2.7 Score=38.65 Aligned_cols=26 Identities=31% Similarity=0.208 Sum_probs=22.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNGEPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~~~~iiD~~ 164 (240)
-+||+||+.-|||+.-+..+-|-||.
T Consensus 232 KIIHRDLKSPNiLIs~~d~VKIsDFG 257 (904)
T KOG4721|consen 232 KIIHRDLKSPNILISYDDVVKISDFG 257 (904)
T ss_pred hHhhhccCCCceEeeccceEEecccc
Confidence 47999999999999888777899975
No 486
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=68.89 E-value=3.4 Score=34.74 Aligned_cols=32 Identities=25% Similarity=0.204 Sum_probs=25.6
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
..+|==||=|.+|||++.+|...=|||...+|
T Consensus 138 ~YiLgigDRH~~NILid~~G~liHIDFG~ilg 169 (289)
T cd00893 138 CYLLQIKDRHNGNILLDSDGHIIHIDFGFILD 169 (289)
T ss_pred HHHhhccccCCCceEECCCCCEEEEehHHhhC
Confidence 44677799999999999888888999754443
No 487
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=68.80 E-value=3.6 Score=33.51 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=24.8
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~G 168 (240)
..++==||=|++|||++. +|...-||+...+|
T Consensus 138 ~YilgigDRh~~NIli~~~tG~~~HIDfg~~~~ 170 (237)
T cd00892 138 GYILGLGDRHGENILFDSNTGDVVHVDFNCLFD 170 (237)
T ss_pred HHHhccCCCCcccEEEEcCCCcEEEEehHhhhc
Confidence 446667999999999997 67778899754444
No 488
>PHA03111 Ser/Thr kinase; Provisional
Probab=68.72 E-value=4.1 Score=35.14 Aligned_cols=23 Identities=30% Similarity=0.183 Sum_probs=18.1
Q ss_pred CCCcceeccCCCCCCeeecCCCC
Q 026343 135 NVEPCLLHGDLWSGNISSDKNGE 157 (240)
Q Consensus 135 ~~~p~lvHgDl~~~Nvlv~~~~~ 157 (240)
+..--++|-|++|+|||+=+..+
T Consensus 299 p~c~nF~H~DLKPdNILiFds~~ 321 (444)
T PHA03111 299 PCCDNFLHVDLKPDNILIFDSDE 321 (444)
T ss_pred CCcceeeeccCCCCcEEEecCCC
Confidence 45668999999999999855443
No 489
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=67.86 E-value=3.1 Score=38.37 Aligned_cols=26 Identities=27% Similarity=0.111 Sum_probs=22.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 026343 138 PCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
--+||+||-+.|+||+++...-|-||
T Consensus 656 ~nfVHrd~a~rNcLv~~e~~iKiadf 681 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGEFTIKIADF 681 (807)
T ss_pred hchhhccccccceeecCcccEEecCc
Confidence 35899999999999988776779997
No 490
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=67.25 E-value=3.9 Score=32.96 Aligned_cols=31 Identities=35% Similarity=0.437 Sum_probs=24.1
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccCCCC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPACYY 167 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~ 167 (240)
..++-=||-|++||+++. +|...-||+...+
T Consensus 130 ~YvlglgDRh~~NIli~~~tG~v~hIDf~~~~ 161 (222)
T cd05164 130 GYILGLGDRHLDNILIDRETGEVVHIDFGCIF 161 (222)
T ss_pred HHHhccCCCCCceEEEECCCCcEEEEccHHhh
Confidence 446777999999999998 5667789975433
No 491
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=66.71 E-value=4.2 Score=33.97 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=24.6
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~~~G 168 (240)
..++-=||-|++||+++. +|...-||+...+|
T Consensus 180 ~yilglgDRh~~NIll~~~tG~v~hiDf~~~f~ 212 (279)
T cd05171 180 GYILGLGDRHANNILIDEKTAEVVHIDLGIAFE 212 (279)
T ss_pred HHhhccCCCCcccEEEEcCcCcEEEEechhhhc
Confidence 446667999999999985 57788999765443
No 492
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole
Probab=66.48 E-value=4 Score=34.70 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=26.7
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
...+|--||=|.+|||++.+|...=|||...+|
T Consensus 158 ~tYiLgigDRHn~NILid~~G~l~HIDFG~il~ 190 (311)
T cd05167 158 ISYLLQIKDRHNGNIMIDDDGHIIHIDFGFIFE 190 (311)
T ss_pred HHHHhhccccCccceEEcCCCCEEEEeeHHhhc
Confidence 345788899999999999988888999754443
No 493
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=66.19 E-value=3.8 Score=33.47 Aligned_cols=28 Identities=25% Similarity=0.214 Sum_probs=23.0
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcc
Q 026343 136 VEPCLLHGDLWSGNISSDKNGEPVILDP 163 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~~~~~~iiD~ 163 (240)
-.+.++|+|++|.|+|....+..-|=||
T Consensus 141 h~k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 141 HLKRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ccCCcccCCCCHHHhccCCCCCeeccCC
Confidence 4678999999999999987776666664
No 494
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any
Probab=65.86 E-value=4.4 Score=35.11 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=26.0
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
..+|==||=|.+|||++.+|...=|||...+|
T Consensus 201 ~YiLgigDRH~~NILl~~~G~l~HIDFG~~lg 232 (353)
T cd05166 201 TYVLGICDRHNDNIMLTKSGHMFHIDFGKFLG 232 (353)
T ss_pred HHHhhccccCCCceEECCCCCEEEEeeHHhcc
Confidence 44667799999999999888888999765555
No 495
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=65.34 E-value=3.6 Score=34.36 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=24.0
Q ss_pred CCcceeccCCCCCCeeecC-CCCeEEEccCC
Q 026343 136 VEPCLLHGDLWSGNISSDK-NGEPVILDPAC 165 (240)
Q Consensus 136 ~~p~lvHgDl~~~Nvlv~~-~~~~~iiD~~~ 165 (240)
...++==||=|++|||++. +|...-||+..
T Consensus 179 ~~YilglgDRH~~NIll~~~tG~v~HIDfg~ 209 (280)
T cd05169 179 VGYILGLGDRHPSNIMIDRLTGKVIHIDFGD 209 (280)
T ss_pred HHhheeccCCCcceEEEEcCCCCEEEEecHH
Confidence 3456777999999999997 67788899753
No 496
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=65.24 E-value=14 Score=29.69 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeeccCCCCC-----------------chHHHHHHHHHHHhhcC
Q 026343 2 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-----------------GNQSVFGKKLAEMHKAG 64 (240)
Q Consensus 2 ~~~E~~~L~~l~~~~~v~vP~v~~~~~~~~~~~~~vme~l~G~~~~-----------------~~~~~lg~~La~lH~~~ 64 (240)
+..|..+|+.+... .+.+++.... .+..+++||+++|..+. ..+.++...|+.||+..
T Consensus 48 ~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 48 FLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred HHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 45788888887642 2333444332 45679999999986531 12467888999999865
Q ss_pred C
Q 026343 65 K 65 (240)
Q Consensus 65 ~ 65 (240)
.
T Consensus 123 i 123 (260)
T cd05070 123 Y 123 (260)
T ss_pred c
Confidence 3
No 497
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin
Probab=65.22 E-value=4 Score=35.33 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=25.6
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccCCCCC
Q 026343 137 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 168 (240)
Q Consensus 137 ~p~lvHgDl~~~Nvlv~~~~~~~iiD~~~~~G 168 (240)
..+|==||=|.+|||++.+|...=|||+..+|
T Consensus 201 ~YiLGigDRH~~NILi~~~G~~~HIDFG~ilg 232 (350)
T cd00896 201 TYILGVGDRHLDNLLLTKDGKLFHIDFGYILG 232 (350)
T ss_pred HHHhcccccCCCcEEEcCCCCEEEEEhHHhhC
Confidence 44667799999999999888888999764444
No 498
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=64.77 E-value=3.4 Score=33.54 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=22.2
Q ss_pred ceeccCCCCCCeeecCCC-CeEEEccC
Q 026343 139 CLLHGDLWSGNISSDKNG-EPVILDPA 164 (240)
Q Consensus 139 ~lvHgDl~~~Nvlv~~~~-~~~iiD~~ 164 (240)
.++|+|++|.|++++..+ ...++|+.
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 399999999999998776 47899964
No 499
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=64.72 E-value=5.3 Score=34.65 Aligned_cols=22 Identities=27% Similarity=0.131 Sum_probs=17.6
Q ss_pred CCCcceeccCCCCCCeeecCCC
Q 026343 135 NVEPCLLHGDLWSGNISSDKNG 156 (240)
Q Consensus 135 ~~~p~lvHgDl~~~Nvlv~~~~ 156 (240)
+..--++|-||+|+|||+=+..
T Consensus 295 p~c~nF~H~DLKPdNILiFds~ 316 (434)
T PF05445_consen 295 PCCTNFLHVDLKPDNILIFDSK 316 (434)
T ss_pred CCcceeeecccCcCcEEEecCC
Confidence 4556899999999999985543
No 500
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=62.99 E-value=4.8 Score=33.67 Aligned_cols=27 Identities=26% Similarity=0.145 Sum_probs=20.1
Q ss_pred cceeccCCCCCCeeecC-C-CCeEEEccC
Q 026343 138 PCLLHGDLWSGNISSDK-N-GEPVILDPA 164 (240)
Q Consensus 138 p~lvHgDl~~~Nvlv~~-~-~~~~iiD~~ 164 (240)
.-|||+||+.+|||+-. | ..+-+.||.
T Consensus 140 knlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 140 KNLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred cchhhcccccceEEEecCCccEEEeeecc
Confidence 35899999999999843 3 235688864
Done!