BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026347
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 37 EVFEESGRSLVRGTLDYLQGLKMLGVKRIERLLPTGTSLTVVGEAVKDDIGTVRIQRPHK 96
E F + +S Y+ G + GV+ E +L G ++T VGE V D+ T+++Q P
Sbjct: 158 EKFHPAVQSFSNILGHYMTGERPKGVQETEEMLKIGATITGVGELVLDN-KTIKLQPPKD 216
Query: 97 GP-FYVSPKTIDELIENLGKWARWYKYAS--FGL-TIFGTFLIAKRAIHYILQRKRRWEL 152
G FY+S + L+E RW++ S FG+ + F I +R + +++ L
Sbjct: 217 GMLFYLSSMDYEGLLEKQEVQMRWWRILSIVFGVASCITLFFILRRKYRHYKEKQHLKNL 276
Query: 153 HRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMC 212
R + A +R +Q+ Q + + C ICL E + VF+ CGH+C
Sbjct: 277 QREFEESRARQRVQQE--------------PQNKEEVQNPCSICLSTEKSCVFLECGHVC 322
Query: 213 CCIICSWHLTN---CPLCRRRIDQVVRTF 238
CI C L + CP+CR ID++V +
Sbjct: 323 SCISCYQALPSPKKCPICRNFIDRIVPLY 351
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 1 MLSMSKEVPWYLDDGTGRAFV--VGARGATGFVLTVGSEVFEESGRSLVRGTLDYLQGLK 58
+L VP+ L G ++FV + ATG + + E F ++ YL G K
Sbjct: 114 LLQRVNAVPFNLL-GLNKSFVRVLCPLEATGPKMEIVHEKFHQATYGFTDLIGQYLSGEK 172
Query: 59 MLGVKRIERLLPTGTSLTVVGEAVKDDIGTVRIQRPHKGP-FYVSPKTIDELI-ENLGKW 116
G E +L G SLTVVGE + D ++I+ P G +++S + L+ E G+
Sbjct: 173 PKGQLETEEMLKVGASLTVVGELILDTDRLLKIRPPTDGSEYFLSSADFETLLMEQEGQA 232
Query: 117 ARWYKYASFGLTIFGTFLIAKRAIHYILQRKRRWELH--RRVLAAAAVKRSEQDNEGTNG 174
W +A + G ++ Y Q K RWE RR E+DN N
Sbjct: 233 EVWRVFACI-CALAGVAVLIWTGRRYYRQLKLRWEQENLRREFEGMGTGEREEDNGVENA 291
Query: 175 QAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHLTN--CPLCRRRID 232
CVICL V + CGH+CCC C L CP+CR+ I
Sbjct: 292 ------------------CVICLSNPRGCVLLDCGHVCCCFRCYQALPQPFCPICRQHIK 333
Query: 233 QVVRTFR 239
+VV ++
Sbjct: 334 RVVPLYQ 340
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 26/242 (10%)
Query: 8 VPWYL---DDGTGRAF-VVGARGATGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVK 63
VP+ L +DG A V+ + L E F S +S Y+ G + G++
Sbjct: 124 VPFDLVPHEDGVDVAVRVLKPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPKGIQ 183
Query: 64 RIERLLPTGTSLTVVGEAVKDDIGTVRIQRPHKG-PFYVSPKTIDELIENLGKWARWYKY 122
E +L G +LT VGE V D+ +VR+Q P +G +Y+S + D L++ R +K
Sbjct: 184 ETEEMLKVGATLTGVGELVLDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKV 242
Query: 123 AS--FGLTIFGTFLIAKRAIHYILQRKRRWELHRRVLAAAAVKRSEQDNEGTNGQAENGS 180
+ FG T R + LQR+ R L + E +A+ S
Sbjct: 243 LALVFGFATCATLFFILRKQY--LQRQERLRL------------KQMQEEFQEHEAQLLS 288
Query: 181 DGTQRDR-VMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHL---TNCPLCRRRIDQVVR 236
DR + CV+CL + VF+ CGH+C C C L CP+CR+ I +V+
Sbjct: 289 RAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIP 348
Query: 237 TF 238
+
Sbjct: 349 LY 350
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 26/242 (10%)
Query: 8 VPWYL---DDGTGRAF-VVGARGATGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVK 63
VP+ L +DG A V+ + L E F S +S Y+ G + G++
Sbjct: 124 VPFDLVPHEDGVDVAVRVLKPLDSVDLGLEAVYEKFHPSIQSFTDVIGHYISGERPKGIQ 183
Query: 64 RIERLLPTGTSLTVVGEAVKDDIGTVRIQRPHKG-PFYVSPKTIDELIENLGKWARWYKY 122
E +L G +LT VGE V D+ +VR+Q P +G +Y+S + D L++ R +K
Sbjct: 184 ETEEMLKVGATLTGVGELVLDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKV 242
Query: 123 AS--FGLTIFGTFLIAKRAIHYILQRKRRWELHRRVLAAAAVKRSEQDNEGTNGQAENGS 180
+ FG T R + LQR+ R L + E +A+ S
Sbjct: 243 LALVFGFATCATLFFILRKQY--LQRQERLRL------------KQMQEEFQEHEAQLLS 288
Query: 181 DGTQRDR-VMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHL---TNCPLCRRRIDQVVR 236
DR + CV+CL + VF+ CGH+C C C L CP+CR+ I +V+
Sbjct: 289 RAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIP 348
Query: 237 TF 238
+
Sbjct: 349 LY 350
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 37 EVFEESGRSLVRGTLDYLQGLKMLGVKRIERLLPTGTSLTVVGEAVKDDIGTVRIQRPHK 96
E F S +S Y+ G + G++ E +L G +LT +GE V D+ VR+Q P +
Sbjct: 157 EKFHPSVQSFTDAIGHYISGERPKGIQETEEMLKVGATLTGIGELVLDN-NAVRLQPPKQ 215
Query: 97 G-PFYVSPKTIDELIENLGKWARWYKYASFGLTIFGTFLIAKRAIHYILQRKRRWELHRR 155
G +Y+S + D L+ R +K + +FG A + +IL R+ LHR+
Sbjct: 216 GMQYYLSSQDFDSLLHRQESSVRLWKIL---VLVFGFATCA--TLFFIL---RKQYLHRQ 267
Query: 156 VLAAAAVKRSEQDNEGTNGQAENGSDGTQRDR-VMPDLCVICLEQEYNAVFVPCGHMCCC 214
+ E +A+ S + DR + CV+CL + VF+ CGH+C C
Sbjct: 268 ERLRQQQLQEE----FLEHEAQLLSQASPEDRESLKSACVVCLSNFKSCVFLECGHVCSC 323
Query: 215 IICSWHLTN---CPLCRRRIDQVVRTF 238
C L CP+CRR I +V+ +
Sbjct: 324 RQCYLALPEPKRCPICRREITRVIPLY 350
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 174 GQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQ 233
NGSD ++ DLC +C++ E N VF+ CGH+ CC +CS L CP+CR RI +
Sbjct: 605 NNNNNGSDESK------DLCTVCMDNEINTVFLECGHLSCCSLCSVKLKKCPICRSRITR 658
Query: 234 VVRTFR 239
V+ F+
Sbjct: 659 VINIFK 664
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 158 AAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIIC 217
A ++ K +E NEG AE+ ++ + P CVICL+ +PCGHM C+ C
Sbjct: 429 AVSSAKPAE--NEGDAKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSC 486
Query: 218 SWHLTN----CPLCRRRIDQVVRTF 238
+ + CP+CR +I+Q++R +
Sbjct: 487 LKDIESKKWGCPICRAKINQIIRLY 511
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
LC++C E+E N+ F PCGH CC C+ L +CP+CR R++ V +
Sbjct: 386 LCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 432
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
LC++C E+E N+ F PCGH CC C+ L +CP+CR R++ V +
Sbjct: 386 LCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 432
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 182 GTQRDRVMPD---------LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRID 232
G Q+ R++ + LC++C E+E +A F PCGHM CC C+ L +CP+CR ++
Sbjct: 364 GCQQSRLLQEKLQKLREALLCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSCPVCRSEVE 423
Query: 233 QVVRTF 238
V +
Sbjct: 424 HVQHVY 429
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
LC+ C E+E N+ F PCGH CC C+ L +CP+CR R++ V +
Sbjct: 386 LCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 432
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 152 LHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHM 211
+ +++ A AV ++ G+ E LC IC EYN F+PCGH+
Sbjct: 362 IFNKIVEATAVATPSTNSSGSTSIPEE------------KLCKICYGAEYNTAFLPCGHV 409
Query: 212 CCCIICSWHLTNCPLCRRRIDQVVRTF 238
C C+ +T CPLCR+ V+R +
Sbjct: 410 VACAKCASSVTKCPLCRKPFTDVMRVY 436
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
LC +CL++E VF+PCGH+ C C+ + NCP+CR I VRTF
Sbjct: 450 LCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTF 496
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C EQE +A F PCGHM CC C+ L CP+CR +D+V +
Sbjct: 381 CALCCEQEISAAFCPCGHMFCCYNCASQLQCCPVCRSEVDRVQHVY 426
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTF 602
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
+C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 552 MCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTN----CPLCRRRIDQVVRTF 238
LCVIC++ AV VPCGH+ CI C + N CP+CR IDQV++ +
Sbjct: 324 LCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLY 374
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 564 CKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTF 609
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 565 CKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTF 610
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 616
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 117 ARWYKYASFGLTIFGTFLIAKRAIHYILQRKRRWELHRRVLAAAAVKRSEQDNEGTNGQA 176
ARWY + L + G + +RV+ A V R + A
Sbjct: 169 ARWYDRCEYVLLVKGRDFV------------------QRVMTEACVVRDADNEPHIERPA 210
Query: 177 ENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVR 236
R LC ICL E FVPCGH+ C C+ +T CP+CR ++D+ VR
Sbjct: 211 VEAEVADDR------LCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVR 264
Query: 237 TFR 239
++
Sbjct: 265 MYQ 267
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 13/67 (19%)
Query: 177 ENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHLTN----CPLCRRRID 232
E+G+ GT C ICL+ AV VPCGH+ C+ C + + CP+CR +ID
Sbjct: 404 EDGNTGT---------CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKID 454
Query: 233 QVVRTFR 239
QV++ +R
Sbjct: 455 QVIKLYR 461
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
+C +C++++ + +FVPCGH+ C C+ +L +CP+CR I VR F
Sbjct: 353 MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 399
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR I VRTF
Sbjct: 311 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 356
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 174 GQAENGSDGTQRDRVMP------DLCVICLEQEYNAVFVPCGHMCCCIICSWHLTN---- 223
G A N V P D C IC E + V CGHMC C C L
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHA 555
Query: 224 -CPLCRRRIDQVVRTFR 239
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
+C +C++++ + +FVPCGH+ C C+ +L +CP+CR I VR F
Sbjct: 297 MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 343
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
C +C+++E + VF+PCGH+ C C+ L CP+CR + VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTF 602
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 192 LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
+C +C++ + + VFVPCGH+ C C+ +L +CP+CR I VR F
Sbjct: 317 MCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 363
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 174 GQAENGSDGTQRDRVMP------DLCVICLEQEYNAVFVPCGHMCCCIICSWHLTN---- 223
G A N V P D C IC E + V CGHMC C C L
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHA 555
Query: 224 -CPLCRRRIDQVVRTFR 239
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 157 LAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCII 216
L +A +E ++ T+ Q E + R LC IC+++ VF+PCGH+ C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 217 CSWHLTNCPLCRRRIDQVVRTF 238
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCNAVIDFKQRVF 234
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 157 LAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCII 216
L +A +E ++ T+ Q E + R LC IC+++ VF+PCGH+ C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 217 CSWHLTNCPLCRRRIDQVVRTF 238
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 148 RRWELHRRVLAAAAVKRSEQDNEGTN---GQAENGSDGTQRDRVMPDLCVICLEQEYNAV 204
+WEL RV R +D +G AE+ + G + +LC IC++ + V
Sbjct: 274 EKWELMERV------TRLYKDQKGLQHLVSGAEDQNGGAVPSGLEENLCKICMDSPIDCV 327
Query: 205 FVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
+ CGHM C C + CP+CR+ + + V FR
Sbjct: 328 LLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 362
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 157 LAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCII 216
L +A +E + T+ Q E + R LC IC+++ VF+PCGH+ C
Sbjct: 153 LVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 217 CSWHLTNCPLCRRRIDQVVRTF 238
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 148 RRWELHRRVLAAAAVKRSEQD----NEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNA 203
+WEL RV ++ Q NE NG G + +LC IC++ +
Sbjct: 288 EKWELMERVTRLYKDQKGLQHLVSGNEDQNG-------GAVPSGLEENLCKICMDSPIDC 340
Query: 204 VFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
V + CGHM C C + CP+CR+ + + V FR
Sbjct: 341 VLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 376
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 148 RRWELHRRVLAAAAVKRSEQD----NEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNA 203
+WEL RV ++ Q NE NG G + +LC IC++ +
Sbjct: 273 EKWELMERVTRLYKDQKGLQHLVSGNEDQNG-------GAVPSGLEENLCKICMDSPIDC 325
Query: 204 VFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
V + CGHM C C + CP+CR+ + + V FR
Sbjct: 326 VLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 361
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 168 DNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHL---TN- 223
DN T G A +G + T CVICL + + +PC H+C C C+ L TN
Sbjct: 301 DNSITQGTAASGLEDTGGKE-----CVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNK 355
Query: 224 CPLCRRRIDQVVR 236
CP+CR+ I ++V+
Sbjct: 356 CPICRQPIHELVK 368
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 149 RWELHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
+WEL +V Q + G Q ++ D + LC IC++ + V + C
Sbjct: 298 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS--------LCRICMDAVIDCVLLEC 349
Query: 209 GHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
GHM C C ++ CP+CR+ + + V F+
Sbjct: 350 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 380
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 149 RWELHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
+WEL +V Q + G Q ++ D + LC IC++ + V + C
Sbjct: 293 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS--------LCRICMDAVIDCVLLEC 344
Query: 209 GHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
GHM C C ++ CP+CR+ + + V F+
Sbjct: 345 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 375
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 170 EGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICS----WHLTNCP 225
E N Q SD D + CV+CL + + +PC H+C C C+ + NCP
Sbjct: 257 ENKNNQETKPSDDENSDNS--NECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCP 314
Query: 226 LCR 228
+CR
Sbjct: 315 ICR 317
>sp|Q80ZI6|LRSM1_MOUSE E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus GN=Lrsam1 PE=2
SV=1
Length = 727
Score = 48.1 bits (113), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQVVRTF 238
CV+CLE+E VF+ CGH+CCC C L CPLCR+ I Q +R +
Sbjct: 679 CVVCLEREAQMVFLTCGHVCCCQQCCQPLRTCPLCRQEISQRLRIY 724
>sp|Q6R7D3|Y096_OSHVF Putative RING finger protein ORF96 OS=Ostreid herpesvirus 1
(isolate France) GN=ORF96 PE=4 SV=1
Length = 240
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLCRRRIDQV 234
CV+C+E++ VF PC H CC CS H++NCP CR I V
Sbjct: 9 CVVCMEEKPLVVFEPCMHHNCCESCSGHVSNCPYCRADITGV 50
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 173 NGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIICSWHL---TN-CPLCR 228
N +NG D +R + CVICL + + +PC HMC C C+ L TN CP+CR
Sbjct: 227 NTVDDNGEDANERGKE----CVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICR 282
Query: 229 RRIDQVVR 236
+ +D+++
Sbjct: 283 QPVDRLLE 290
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 132 TFLIAKRAIHYILQRKRRWELHRRVLAA---AAVKRSEQDNEGTNGQAENGSDGTQRDRV 188
F K+ + LQ L VL A +A K + QD ++ S Q R+
Sbjct: 384 NFKDIKKTMEEKLQTSGSNYLSLEVLIADLVSAQKDNSQDESSQTSLQKDISTEEQLRRL 443
Query: 189 MPD-LCVICLEQEYNAVFVPCGHMCCCIICSWHLTNCPLC 227
+ LC IC+++ VFVPCGH+ C C+ + CP+C
Sbjct: 444 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMC 483
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 149 RWELHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
+WEL +V Q + G Q ++ D + LC IC++ + V + C
Sbjct: 292 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 343
Query: 209 GHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
GHM C C ++ CP+CR+ + + V F+
Sbjct: 344 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 374
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTN-----CPLCRRRIDQVVRTFR 239
C +C + E + V CGHMC C C L CP+CRR I V++ +R
Sbjct: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 193 CVICLEQEYNAVFVPCGHMCCCIICSWHLTN-----CPLCRRRIDQVVRTFR 239
C +C + E + V CGHMC C C L CP+CRR I V++ +R
Sbjct: 494 CTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKIYR 545
>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2
Length = 754
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 21/87 (24%)
Query: 158 AAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPCGHMCCCIIC 217
AA K S D + T+ AE C IC E ++V CGHMC C C
Sbjct: 681 AANKWKDSLSDQQSTDSSAE---------------CTICYENPIDSVLYMCGHMCMCYDC 725
Query: 218 S---WHLT---NCPLCRRRIDQVVRTF 238
+ W CPLCR I V+RT+
Sbjct: 726 AIEQWRGVGGGQCPLCRAVIRDVIRTY 752
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 149 RWELHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
+WEL +V Q + G Q ++ D + LC IC++ + V + C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 340
Query: 209 GHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
GHM C C ++ CP+CR+ + + V F+
Sbjct: 341 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 149 RWELHRRVLAAAAVKRSEQDNEGTNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
+WEL +V Q + G Q ++ D + LC IC++ + V + C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 340
Query: 209 GHMCCCIICSWHLTNCPLCRRRIDQVVRTFR 239
GHM C C ++ CP+CR+ + + V F+
Sbjct: 341 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 151 ELHRRVLAAAAVKRSEQDNEG--TNGQAENGSDGTQRDRVMPDLCVICLEQEYNAVFVPC 208
E V+ A + EQ NE GQ Q +R CVIC +Q + +PC
Sbjct: 330 EAEEEVIRTAPARGREQLNEDEPAAGQDPWKLLKEQEER---KKCVICQDQSKTVLLLPC 386
Query: 209 GHMCCCIICSWHLT-------NCPLCRRRIDQVVRTF 238
H+C C C+ L NCPLCRR I Q + +
Sbjct: 387 RHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVY 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,130,456
Number of Sequences: 539616
Number of extensions: 3867876
Number of successful extensions: 13533
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 13279
Number of HSP's gapped (non-prelim): 347
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)