Query 026352
Match_columns 240
No_of_seqs 140 out of 1171
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 06:55:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026352.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026352hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 2.5E-27 5.5E-32 208.8 18.3 212 1-219 18-242 (358)
2 PRK11272 putative DMT superfam 99.9 6.3E-22 1.4E-26 170.6 19.9 187 2-219 14-201 (292)
3 TIGR00950 2A78 Carboxylate/Ami 99.9 3.3E-21 7.1E-26 162.9 18.0 181 8-219 1-182 (260)
4 PRK11453 O-acetylserine/cystei 99.9 1E-21 2.2E-26 169.8 14.0 185 2-218 10-197 (299)
5 PRK11689 aromatic amino acid e 99.9 2.8E-20 6E-25 160.6 16.5 174 2-198 10-187 (295)
6 TIGR00688 rarD rarD protein. T 99.8 1.1E-19 2.3E-24 153.7 17.0 159 1-191 7-171 (256)
7 TIGR00817 tpt Tpt phosphate/ph 99.8 3.8E-19 8.2E-24 153.9 18.6 179 13-219 19-199 (302)
8 PRK15430 putative chlorampheni 99.8 4.8E-19 1E-23 153.0 15.8 176 2-209 14-193 (296)
9 PRK10532 threonine and homoser 99.8 6.4E-18 1.4E-22 145.7 16.9 182 1-218 17-198 (293)
10 PTZ00343 triose or hexose phos 99.7 1.4E-16 3E-21 140.7 17.3 180 12-219 65-253 (350)
11 TIGR03340 phn_DUF6 phosphonate 99.7 3.3E-16 7.1E-21 134.3 17.4 163 2-192 7-170 (281)
12 PF06027 DUF914: Eukaryotic pr 99.7 3.4E-15 7.3E-20 129.9 17.8 197 6-220 23-221 (334)
13 PF00892 EamA: EamA-like trans 99.6 6E-16 1.3E-20 115.8 7.6 125 6-138 1-125 (126)
14 COG0697 RhaT Permeases of the 99.6 9.6E-14 2.1E-18 118.2 17.7 176 2-204 13-191 (292)
15 COG2510 Predicted membrane pro 99.6 1.2E-14 2.6E-19 107.2 10.0 128 2-137 9-137 (140)
16 TIGR00776 RhaT RhaT L-rhamnose 99.4 7.7E-12 1.7E-16 107.8 14.3 180 2-204 7-187 (290)
17 TIGR00950 2A78 Carboxylate/Ami 99.3 2E-11 4.3E-16 103.1 11.6 124 2-134 134-259 (260)
18 COG2962 RarD Predicted permeas 99.3 3.8E-10 8.1E-15 94.9 17.3 155 2-188 13-170 (293)
19 PF13536 EmrE: Multidrug resis 99.3 6.6E-12 1.4E-16 93.2 5.8 104 30-140 2-107 (113)
20 COG5006 rhtA Threonine/homoser 99.3 3.2E-10 7E-15 93.3 16.1 170 13-217 29-198 (292)
21 KOG4510 Permease of the drug/m 99.2 1.3E-11 2.8E-16 102.1 4.0 192 6-215 47-239 (346)
22 KOG2765 Predicted membrane pro 99.2 1.7E-10 3.6E-15 99.7 9.9 128 71-215 169-299 (416)
23 PRK11272 putative DMT superfam 99.1 1.2E-09 2.6E-14 94.1 12.3 130 2-139 156-285 (292)
24 PRK10532 threonine and homoser 99.1 1.8E-09 3.9E-14 93.2 12.8 129 2-140 154-282 (293)
25 PF08449 UAA: UAA transporter 99.0 5.3E-08 1.2E-12 84.4 18.0 187 11-216 15-205 (303)
26 PRK11689 aromatic amino acid e 99.0 7.3E-09 1.6E-13 89.4 11.2 126 2-139 162-287 (295)
27 TIGR03340 phn_DUF6 phosphonate 98.9 1.3E-08 2.8E-13 87.3 11.2 127 2-136 150-280 (281)
28 PLN00411 nodulin MtN21 family 98.9 3.4E-08 7.3E-13 87.5 12.6 129 2-139 195-328 (358)
29 PRK11453 O-acetylserine/cystei 98.8 5.9E-08 1.3E-12 83.9 12.4 130 2-138 149-286 (299)
30 TIGR00817 tpt Tpt phosphate/ph 98.7 3.5E-08 7.6E-13 85.4 8.4 132 2-139 151-293 (302)
31 PF04142 Nuc_sug_transp: Nucle 98.7 2.9E-07 6.3E-12 77.4 13.1 152 56-216 13-165 (244)
32 PRK15430 putative chlorampheni 98.5 1E-06 2.2E-11 76.2 11.7 130 2-139 155-285 (296)
33 PF03151 TPT: Triose-phosphate 98.5 2.2E-06 4.7E-11 66.4 10.9 128 2-136 6-150 (153)
34 PTZ00343 triose or hexose phos 98.5 2.6E-06 5.7E-11 75.4 12.5 130 2-137 200-346 (350)
35 KOG1441 Glucose-6-phosphate/ph 98.5 8E-07 1.7E-11 77.0 8.8 179 14-219 35-220 (316)
36 COG0697 RhaT Permeases of the 98.5 3.1E-06 6.8E-11 71.8 12.5 126 2-138 160-286 (292)
37 KOG2766 Predicted membrane pro 98.4 8.4E-09 1.8E-13 85.2 -4.6 187 7-219 30-217 (336)
38 TIGR00776 RhaT RhaT L-rhamnose 98.4 2.4E-06 5.1E-11 73.7 10.3 122 2-138 158-287 (290)
39 PRK15051 4-amino-4-deoxy-L-ara 98.4 9.8E-07 2.1E-11 65.2 6.2 68 65-138 41-108 (111)
40 KOG2234 Predicted UDP-galactos 98.3 0.00028 6E-09 61.4 20.4 199 2-215 21-233 (345)
41 COG5006 rhtA Threonine/homoser 98.1 2E-05 4.4E-10 65.3 8.5 125 2-135 154-278 (292)
42 KOG3912 Predicted integral mem 98.1 5.5E-05 1.2E-09 63.7 10.7 185 10-211 17-222 (372)
43 KOG1443 Predicted integral mem 97.8 0.00017 3.8E-09 61.4 9.9 170 25-220 45-222 (349)
44 PF06027 DUF914: Eukaryotic pr 97.8 0.00027 5.8E-09 62.0 11.2 132 1-140 173-306 (334)
45 PRK02971 4-amino-4-deoxy-L-ara 97.8 5.3E-05 1.1E-09 57.4 5.2 70 63-138 50-121 (129)
46 KOG1444 Nucleotide-sugar trans 97.6 0.0017 3.7E-08 55.8 13.2 190 3-219 15-211 (314)
47 KOG4314 Predicted carbohydrate 97.5 0.00014 3.1E-09 58.3 4.9 96 73-191 65-160 (290)
48 PF06800 Sugar_transport: Suga 97.5 0.017 3.7E-07 49.1 17.4 126 58-203 43-172 (269)
49 TIGR00688 rarD rarD protein. T 97.3 0.0024 5.1E-08 53.8 10.5 102 2-108 152-255 (256)
50 PRK13499 rhamnose-proton sympo 97.2 0.023 4.9E-07 50.2 14.8 165 2-182 13-190 (345)
51 PF10639 UPF0546: Uncharacteri 97.1 0.0014 2.9E-08 48.3 5.6 110 1-136 1-111 (113)
52 KOG1442 GDP-fucose transporter 97.1 0.0097 2.1E-07 50.3 11.0 173 24-219 60-239 (347)
53 KOG1580 UDP-galactose transpor 96.9 0.0074 1.6E-07 49.9 8.7 131 71-219 95-226 (337)
54 PF08449 UAA: UAA transporter 96.8 0.014 2.9E-07 50.6 10.5 130 2-138 160-296 (303)
55 COG2962 RarD Predicted permeas 96.7 0.038 8.3E-07 47.1 12.0 126 3-138 155-282 (293)
56 PF06800 Sugar_transport: Suga 96.5 0.01 2.2E-07 50.4 7.5 108 2-118 144-252 (269)
57 PRK10452 multidrug efflux syst 96.5 0.0054 1.2E-07 45.8 4.9 67 67-139 36-103 (120)
58 PRK09541 emrE multidrug efflux 96.5 0.0068 1.5E-07 44.6 5.3 66 68-139 37-103 (110)
59 COG2076 EmrE Membrane transpor 96.1 0.011 2.4E-07 42.9 4.5 64 69-138 38-102 (106)
60 KOG4510 Permease of the drug/m 96.1 0.0032 6.9E-08 53.0 2.0 126 6-140 201-326 (346)
61 PRK10650 multidrug efflux syst 96.1 0.078 1.7E-06 38.9 9.0 63 69-137 43-106 (109)
62 KOG1581 UDP-galactose transpor 95.9 0.27 5.8E-06 42.3 12.6 167 24-214 50-221 (327)
63 KOG1441 Glucose-6-phosphate/ph 95.8 0.023 4.9E-07 49.5 6.1 126 4-137 171-305 (316)
64 PRK11431 multidrug efflux syst 95.7 0.027 5.8E-07 41.1 5.3 65 68-138 36-101 (105)
65 PF04657 DUF606: Protein of un 95.7 0.068 1.5E-06 40.9 7.7 104 24-135 29-137 (138)
66 PF00893 Multi_Drug_Res: Small 95.6 0.017 3.7E-07 41.1 3.9 54 70-129 38-92 (93)
67 KOG2765 Predicted membrane pro 94.9 0.19 4.2E-06 44.4 8.8 132 2-139 253-390 (416)
68 PF05653 Mg_trans_NIPA: Magnes 94.7 0.016 3.4E-07 50.3 1.7 69 66-140 55-123 (300)
69 KOG2922 Uncharacterized conser 93.2 0.023 5E-07 49.1 -0.2 70 65-140 68-137 (335)
70 KOG1580 UDP-galactose transpor 93.2 0.32 6.9E-06 40.5 6.4 71 59-136 240-310 (337)
71 PF03151 TPT: Triose-phosphate 92.6 0.47 1E-05 36.2 6.5 54 167-220 1-60 (153)
72 PRK13499 rhamnose-proton sympo 92.3 5.7 0.00012 35.2 13.5 124 13-138 198-340 (345)
73 PF00892 EamA: EamA-like trans 91.9 0.12 2.6E-06 37.6 2.2 42 176-219 1-42 (126)
74 COG4975 GlcU Putative glucose 91.4 0.046 1E-06 45.6 -0.5 162 3-188 9-174 (288)
75 TIGR00803 nst UDP-galactose tr 91.3 0.21 4.6E-06 41.0 3.4 57 72-134 163-219 (222)
76 COG5070 VRG4 Nucleotide-sugar 91.1 2.4 5.1E-05 35.2 9.0 121 80-219 87-209 (309)
77 KOG1583 UDP-N-acetylglucosamin 89.4 0.68 1.5E-05 39.5 4.7 179 26-220 34-215 (330)
78 COG3238 Uncharacterized protei 88.3 2 4.3E-05 33.3 6.3 109 24-136 33-143 (150)
79 KOG1444 Nucleotide-sugar trans 86.6 7 0.00015 34.0 9.3 121 10-137 171-298 (314)
80 COG4975 GlcU Putative glucose 86.6 0.97 2.1E-05 37.9 3.9 78 56-137 206-283 (288)
81 KOG4831 Unnamed protein [Funct 85.9 3.6 7.7E-05 29.9 6.0 115 1-137 8-123 (125)
82 PF07857 DUF1632: CEO family ( 85.6 12 0.00025 31.8 10.0 180 2-192 6-209 (254)
83 COG2510 Predicted membrane pro 82.8 6.9 0.00015 29.6 6.6 51 168-219 5-55 (140)
84 KOG1581 UDP-galactose transpor 81.3 4.5 9.6E-05 35.1 5.8 110 21-138 198-312 (327)
85 COG4657 RnfA Predicted NADH:ub 76.9 16 0.00034 28.8 7.0 56 163-218 129-189 (193)
86 PF04657 DUF606: Protein of un 74.4 13 0.00028 28.3 6.2 52 168-219 3-54 (138)
87 COG5070 VRG4 Nucleotide-sugar 73.5 27 0.00058 29.2 8.0 107 23-136 183-293 (309)
88 PF04142 Nuc_sug_transp: Nucle 73.3 27 0.0006 29.2 8.4 116 2-117 120-237 (244)
89 KOG1443 Predicted integral mem 71.9 69 0.0015 28.1 10.5 127 3-136 171-312 (349)
90 COG3238 Uncharacterized protei 56.7 57 0.0012 25.3 6.6 55 165-219 4-58 (150)
91 KOG2766 Predicted membrane pro 53.3 65 0.0014 27.6 6.8 128 2-139 172-299 (336)
92 KOG1582 UDP-galactose transpor 51.5 11 0.00024 32.3 2.1 107 96-225 143-250 (367)
93 PF07168 Ureide_permease: Urei 46.0 33 0.00071 29.9 4.1 127 1-134 1-141 (336)
94 PF06379 RhaT: L-rhamnose-prot 42.0 89 0.0019 27.7 6.2 119 57-186 70-193 (344)
95 KOG1582 UDP-galactose transpor 41.5 47 0.001 28.6 4.3 109 22-137 217-330 (367)
96 KOG3912 Predicted integral mem 40.8 1.1E+02 0.0024 26.6 6.4 129 2-136 182-331 (372)
97 PRK02237 hypothetical protein; 40.0 38 0.00081 24.7 3.0 36 97-138 69-104 (109)
98 PF02694 UPF0060: Uncharacteri 39.3 31 0.00067 25.1 2.5 38 96-139 66-103 (107)
99 PF09945 DUF2177: Predicted me 36.9 1.8E+02 0.0039 21.9 6.9 41 172-214 82-122 (128)
100 TIGR00803 nst UDP-galactose tr 36.8 2.2E+02 0.0049 22.9 9.9 89 93-192 10-111 (222)
101 PF07444 Ycf66_N: Ycf66 protei 35.5 1.5E+02 0.0033 20.5 7.2 57 22-86 4-60 (84)
102 KOG1442 GDP-fucose transporter 34.9 1.5E+02 0.0032 25.7 6.3 130 3-139 192-327 (347)
103 PF10754 DUF2569: Protein of u 34.3 2.1E+02 0.0046 21.8 7.3 28 164-191 119-146 (149)
104 PF04342 DUF486: Protein of un 30.1 1.6E+02 0.0034 21.5 4.9 17 101-117 76-92 (108)
105 CHL00196 psbY photosystem II p 27.6 1.3E+02 0.0027 17.4 3.2 20 168-187 8-27 (36)
106 PF06298 PsbY: Photosystem II 23.3 1.6E+02 0.0035 16.9 3.2 21 168-188 8-28 (36)
107 PF05653 Mg_trans_NIPA: Magnes 23.3 1.1E+02 0.0024 26.5 3.7 29 163-191 4-32 (300)
108 PF08802 CytB6-F_Fe-S: Cytochr 23.2 1.5E+02 0.0032 17.4 3.1 26 53-78 4-29 (39)
109 PF09656 PGPGW: Putative trans 22.9 2.1E+02 0.0045 18.0 4.5 43 124-190 6-48 (53)
110 PF12292 DUF3624: Protein of u 20.3 2.8E+02 0.006 18.9 4.4 38 4-42 29-66 (77)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=2.5e-27 Score=208.77 Aligned_cols=212 Identities=28% Similarity=0.500 Sum_probs=168.4
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLER-KIRPKLTLAVFLEIFLLSLLGVSLALNLYF 79 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (240)
|+++++.+++..++.|.+++.|++|..+.++|+.+|++++++++..++| +++++.+++++..+.+.|+++ ..++.+++
T Consensus 18 ~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~~~~~~ 96 (358)
T PLN00411 18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMYVITGY 96 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHHHHHHH
Confidence 6789999999999999999999999999999999999999998876544 333455688889999999998 57888999
Q ss_pred HhhcccCcceeeeeccchhHHHHHHHHHHh------hccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCC----
Q 026352 80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFR------LEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLK---- 149 (240)
Q Consensus 80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~------~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~---- 149 (240)
+|++|+++++++++.+++|+++++++++++ +||+++++ ++|++++++|+.++..++++.....+
T Consensus 97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccccccccccc
Confidence 999999999999999999999999999995 66666665 79999999999887765443210000
Q ss_pred -CCCccc-CCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 150 -GAPIHL-GTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 150 -~~~~~~-~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
++.... .....+.+...|+++.++|+++||.|++++|+..+++|++...+.|++.++++...+.+...++
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~ 242 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK 242 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 000000 0001122346699999999999999999999998888656678889999998888777776654
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.90 E-value=6.3e-22 Score=170.57 Aligned_cols=187 Identities=16% Similarity=0.159 Sum_probs=153.3
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+++.++||++++++|.+.++ +||..++++|+.+++++++++...+ | ++ ..++++++.....|.++...++.+++.+
T Consensus 14 ~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~-~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 89 (292)
T PRK11272 14 FALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLR-G-HP-LPTLRQWLNAALIGLLLLAVGNGMVTVA 89 (292)
T ss_pred HHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHh-C-CC-CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999998875 9999999999999999998876542 2 22 2356788888888888766788899999
Q ss_pred h-cccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 82 M-KYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 82 l-~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
. +++++++++++.++.|+++++++++ +|||+++++ ++|++++++|+.++... + . .
T Consensus 90 ~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~-~---------------~ 145 (292)
T PRK11272 90 EHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-G-N---------------L 145 (292)
T ss_pred HHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-c-c---------------c
Confidence 9 9999999999999999999999986 699999999 59999999999776421 1 0 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
+ +...|++++++++++||.|.+..||..++. +...+.+++.++++.+.+.....++
T Consensus 146 ~-~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (292)
T PRK11272 146 S-GNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGE 201 (292)
T ss_pred c-cchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 124699999999999999999999976543 4567789999999888887765543
No 3
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.88 E-value=3.3e-21 Score=162.85 Aligned_cols=181 Identities=17% Similarity=0.208 Sum_probs=149.8
Q ss_pred HHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 026352 8 VASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHP 87 (240)
Q Consensus 8 wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 87 (240)
||.+++..|..+++..||....+.|+..+.+++.+.... | .++++++.....|.++..+++.++++|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 899999999998877999999999999999888776432 2 234566777788888878899999999999999
Q ss_pred ceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHH
Q 026352 88 TFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKG 167 (240)
Q Consensus 88 ~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 167 (240)
++++++.++.|+++++++++++|||+++++ +.|++++++|+.++... ++ . .+...|
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~-~~----------------~-~~~~~G 129 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSD-GN----------------L-SINPAG 129 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccC-Cc----------------c-cccHHH
Confidence 999999999999999999999999999999 59999999999886521 11 1 123579
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 168 SILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
+.++++++++|+.+.+..||..++.+ ++...+.+++.++.+.+.+.....++
T Consensus 130 ~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 182 (260)
T TIGR00950 130 LLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP 182 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999877663 13455667889999888888766543
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.87 E-value=1e-21 Score=169.79 Aligned_cols=185 Identities=15% Similarity=0.222 Sum_probs=138.6
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+++.++||++++++|.+.++ +||..+.++|+.++++.++++. + ++ +.+++ .....|+.....++.+++.+
T Consensus 10 l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~~---~~~~~g~~~~~~~~~~~~~~ 79 (299)
T PRK11453 10 LLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPLN---LLLGYGLTISFGQFAFLFCA 79 (299)
T ss_pred HHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--c-CC---CCchH---HHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999876 9999999999999887766543 1 21 11222 33444555545566788899
Q ss_pred hcc-cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 82 MKY-VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 82 l~~-~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
++| .++++++++.+++|+++.+++++++|||+++++ ++|++++++|+.++... + . + .
T Consensus 80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~-~-~-~-------------~ 137 (299)
T PRK11453 80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIED-S-L-N-------------G 137 (299)
T ss_pred HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccc-c-C-C-------------C
Confidence 998 488999999999999999999999999999999 59999999999876521 1 1 0 0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCc--hhHHHHHHHHHHHHHHHHHHHhcc
Q 026352 161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPA--KLSISAWMNCIGAAQSAVYTIIVQ 218 (240)
Q Consensus 161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~ 218 (240)
......|++++++++++|+.|++++||..++.++ ....+.+++..+.+.....+...|
T Consensus 138 ~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
T PRK11453 138 QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILD 197 (299)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 1112469999999999999999999997655432 234556777776665555544444
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.85 E-value=2.8e-20 Score=160.58 Aligned_cols=174 Identities=13% Similarity=0.039 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+++.++||++++..|.+.++ +||..+.++|+.+|+++++++. .+++.++ ++++ ....+.++...++.+++.+
T Consensus 10 l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---~~~~-~~~~~~l~~~~~~~~~~~a 81 (295)
T PRK11689 10 LIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---FPKR-YLLAGGLLFVSYEICLALS 81 (295)
T ss_pred HHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc---ccccccc---ccHH-HHHHHhHHHHHHHHHHHHH
Confidence 57889999999999999887 9999999999999999988753 1211111 1222 2334444555788888888
Q ss_pred hcc----cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCC
Q 026352 82 MKY----VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGT 157 (240)
Q Consensus 82 l~~----~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
+++ +++++++++.+++|+++.+++++++|||+++++ ++|++++++|+.++... ++..+..+ .
T Consensus 82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~-~~~~~~~~-------~ 147 (295)
T PRK11689 82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGG-DNGLSLAE-------L 147 (295)
T ss_pred HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecC-Cccchhhh-------h
Confidence 764 577888899999999999999999999999999 59999999999877532 11100000 0
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHH
Q 026352 158 NSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSI 198 (240)
Q Consensus 158 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~ 198 (240)
.....+...|+++.++|++|||.|+++.||..++. ++...
T Consensus 148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~ 187 (295)
T PRK11689 148 INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL 187 (295)
T ss_pred hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH
Confidence 00001224699999999999999999999988776 45543
No 6
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.84 E-value=1.1e-19 Score=153.74 Aligned_cols=159 Identities=11% Similarity=0.119 Sum_probs=125.8
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCCHHH-HHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI-----RPKLTLAV-FLEIFLLSLLGVSLA 74 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~~~~~~ 74 (240)
++++.++||.+++++|. .++ +||.++.++|+.++.++++++...++|++ .++.++++ +..+...|++. ..+
T Consensus 7 ~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 83 (256)
T TIGR00688 7 SLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI-GFN 83 (256)
T ss_pred HHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH-HHH
Confidence 36788999999999998 455 99999999999999988877664433211 11122233 44456667664 479
Q ss_pred HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 026352 75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIH 154 (240)
Q Consensus 75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~ 154 (240)
+.+++++++++++++++++.+++|+++++++++++|||+++++ ++|++++++|+.++...++
T Consensus 84 ~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------------ 145 (256)
T TIGR00688 84 WWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------------ 145 (256)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC------------
Confidence 9999999999999999999999999999999999999999999 5999999999987653211
Q ss_pred cCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352 155 LGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKK 191 (240)
Q Consensus 155 ~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~ 191 (240)
+.. .++++++++|+.|.+..||..++
T Consensus 146 ------~~~-----~~~l~aa~~~a~~~i~~~~~~~~ 171 (256)
T TIGR00688 146 ------SLP-----WEALVLAFSFTAYGLIRKALKNT 171 (256)
T ss_pred ------Cch-----HHHHHHHHHHHHHHHHHhhcCCC
Confidence 111 35688999999999999997653
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.83 E-value=3.8e-19 Score=153.90 Aligned_cols=179 Identities=15% Similarity=0.121 Sum_probs=148.7
Q ss_pred HHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeee
Q 026352 13 FLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTA 92 (240)
Q Consensus 13 i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~i 92 (240)
+..|.++++--+|..+++.|+.++.+...+... ..++++++.++++++.++..|+++ ..++.+.+++++|++++++++
T Consensus 19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~l 96 (302)
T TIGR00817 19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHT 96 (302)
T ss_pred HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHH
Confidence 478988876467999999999999877655421 122333457789999999999997 578899999999999999999
Q ss_pred eccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHH
Q 026352 93 VVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTV 172 (240)
Q Consensus 93 i~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l 172 (240)
+.++.|+++++++++++|||+++++ +.|++++++|+.+.. . + + .+.+ ..|+++++
T Consensus 97 i~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~-~-~-~---------------~~~~-~~G~~~~l 151 (302)
T TIGR00817 97 IKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS-D-T-E---------------LSFN-WAGFLSAM 151 (302)
T ss_pred HHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc-C-C-c---------------cccc-HHHHHHHH
Confidence 9999999999999999999999998 599999999997542 1 1 1 1122 56999999
Q ss_pred HHHHHHHHHHHHHhhhhh--cCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 173 ASCILWSSFYIMQAFTLK--KYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 173 ~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
+|+++|+.|.+..||..+ ++ ++...+.|++..+.+.++|.....|+
T Consensus 152 ~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~ 199 (302)
T TIGR00817 152 ISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEG 199 (302)
T ss_pred HHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999877 67 58899999999999999998876654
No 8
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.82 E-value=4.8e-19 Score=152.96 Aligned_cols=176 Identities=11% Similarity=0.049 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCC--CC-CCHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIR--PK-LTLAVFLEIFLLSLLGVSLALNLY 78 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~~~~~~~ 78 (240)
+++.++||.+++.+|.. ++ +||.++.++|+.++.++++++...+++++. ++ .+++++.. ...+.++...++.++
T Consensus 14 l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 90 (296)
T PRK15430 14 LAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVLIGGNWLLF 90 (296)
T ss_pred HHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHHHHHHHHHH
Confidence 57889999999999975 44 999999999999999888776654321111 00 13344433 335556666899999
Q ss_pred HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352 79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN 158 (240)
Q Consensus 79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
++|++++++++++++.++.|+++++++++++|||+++++ +.|++++++|+.++...++
T Consensus 91 ~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---------------- 148 (296)
T PRK15430 91 IWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---------------- 148 (296)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC----------------
Confidence 999999999999999999999999999999999999999 5999999999988652211
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC-CchhHHHHHHHHHHHHH
Q 026352 159 SVHENWLKGSILTVASCILWSSFYIMQAFTLKKY-PAKLSISAWMNCIGAAQ 209 (240)
Q Consensus 159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~l~ 209 (240)
+ . ..+.++++++||.|.++.||..++. ++....+.|+..++...
T Consensus 149 --~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~ 193 (296)
T PRK15430 149 --S-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY 193 (296)
T ss_pred --C-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Confidence 1 1 1467889999999999999975432 12344455666666544
No 9
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.79 E-value=6.4e-18 Score=145.73 Aligned_cols=182 Identities=13% Similarity=0.123 Sum_probs=140.3
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++++.++|+.++.++|.+.++ +||..+.++|+.+|.++++++... ++ ++.++|+++..+..|++. ...+.++++
T Consensus 17 ~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~~~~~~~~~ 90 (293)
T PRK10532 17 LLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-GGMNYLFYL 90 (293)
T ss_pred HHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 467899999999999999987 999999999999999988876422 22 134567888888888875 467888999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
+++|++++.++++.++.|+++.+++. |+.. + ..++.++++|+.++... +.+ ..
T Consensus 91 al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~~-~~~--------------~~ 143 (293)
T PRK10532 91 SIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLPL-GQD--------------VS 143 (293)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeeec-CCC--------------cc
Confidence 99999999999999999999988763 4432 2 36778889999776521 211 01
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 026352 161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQ 218 (240)
Q Consensus 161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 218 (240)
+. ...|+++.++++++||.|.+..||..++. ++... .++..++++.+.+.....+
T Consensus 144 ~~-~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~ 198 (293)
T PRK10532 144 HV-DLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQA 198 (293)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHcc
Confidence 12 25699999999999999999999998777 46655 4666777777777766543
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.74 E-value=1.4e-16 Score=140.69 Aligned_cols=180 Identities=14% Similarity=0.108 Sum_probs=142.4
Q ss_pred HHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 026352 12 YFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERKIRPKL--TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPT 88 (240)
Q Consensus 12 ~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 88 (240)
-...|.++++ +| |+.+.++|+.++.++..+.... +.++.|+. .+++++.++.+|+++... +...+.|+++++++
T Consensus 65 ~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~~~~-~~~~~~sl~~~svs 141 (350)
T PTZ00343 65 VVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCHLFV-HFGAVISMGLGAVS 141 (350)
T ss_pred HHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHH
Confidence 4478998887 99 9999999999998876554322 22223333 345788899999998754 55567999999999
Q ss_pred eeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHH
Q 026352 89 FMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGS 168 (240)
Q Consensus 89 ~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 168 (240)
.++++.+++|+++++++++++|||+++++ +.++++.++|+.+... + + .+.+ ..|+
T Consensus 142 ~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~-~---------------~~~~-~~G~ 196 (350)
T PTZ00343 142 FTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--K-E---------------LHFT-WLAF 196 (350)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--c-c---------------chhH-HHHH
Confidence 99999999999999999999999999999 5999999999987652 1 1 1122 5799
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCC------chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 169 ILTVASCILWSSFYIMQAFTLKKYP------AKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 169 ~l~l~a~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
+++++|+++|+.|++..||..++.+ ++.....++.+.+.+.++|.....|.
T Consensus 197 ~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~ 253 (350)
T PTZ00343 197 WCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG 253 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999866431 24456666688999999998876654
No 11
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.72 E-value=3.3e-16 Score=134.30 Aligned_cols=163 Identities=11% Similarity=0.127 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLE-RKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++++++|+...+..|...++ -++ ..++++..+.+++.|+...+. +++++..+++.+.. ...+.++...++.+++.
T Consensus 7 ~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (281)
T TIGR03340 7 VFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLL-LAISAVANMVYFLGLAQ 82 (281)
T ss_pred HHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHH-HHHHHHHHHHHHHHHHH
Confidence 57889999999999965554 444 357788888888888765432 22233334444444 44444455689999999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
+++++++++++.+.++.|+++.+++++++|||+++++ ++|+.+++.|+.++... +. .
T Consensus 83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~-~~----------------~ 139 (281)
T TIGR03340 83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLS-RF----------------A 139 (281)
T ss_pred HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcc-cc----------------c
Confidence 9999999999999999999999999999999999999 59999999999876522 11 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 026352 161 HENWLKGSILTVASCILWSSFYIMQAFTLKKY 192 (240)
Q Consensus 161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~ 192 (240)
+.+ ..|+.++++++++|+.|++..|+..++.
T Consensus 140 ~~~-~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 140 QHR-RKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred ccc-hhHHHHHHHHHHHHHHhhhhccccccch
Confidence 112 3588899999999999999999875554
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.68 E-value=3.4e-15 Score=129.91 Aligned_cols=197 Identities=19% Similarity=0.247 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026352 6 ICVASVYFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERK-IRPKLTLAVFLEIFLLSLLGVSLALNLYFASMK 83 (240)
Q Consensus 6 ~~wg~~~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 83 (240)
++=..+.+.++...+.+.+ |....+.-+..-.++..++...++++ +..+..+++|++.++++++.. ..+.+...|++
T Consensus 23 l~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv-~aN~~~v~a~~ 101 (334)
T PF06027_consen 23 LCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV-EANYLVVLAYQ 101 (334)
T ss_pred HHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH-HHHHHHHHHhh
Confidence 3344555555555554555 66666666655555555554443322 222223455666777899986 68999999999
Q ss_pred ccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccc
Q 026352 84 YVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHEN 163 (240)
Q Consensus 84 ~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
||+.+.+.++..+.-+++++++++++|||.++.+ ++|++++++|+.++...+....+ ++..+.+
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~----------~~~~~~~ 165 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGS----------DSSSGSN 165 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccc----------cCCCCCc
Confidence 9999999999999999999999999999999999 69999999999887654321111 0112344
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352 164 WLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPK 220 (240)
Q Consensus 164 ~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 220 (240)
...||++++.++++||.++++.|+..++. ++..+..+..++|.+++.+....+|.+
T Consensus 166 ~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~ 221 (334)
T PF06027_consen 166 PILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERS 221 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehh
Confidence 58899999999999999999999999888 478888999999999999888878764
No 13
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.64 E-value=6e-16 Score=115.78 Aligned_cols=125 Identities=23% Similarity=0.406 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352 6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV 85 (240)
Q Consensus 6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 85 (240)
++||...+..|...++ +||....++|+..+++ +++.....++++.++.+++++......+.++...++.+++.+++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999887 9999999999999998 6666655554444456778888888888887678999999999999
Q ss_pred CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
+++.++.+.+++|+++.+++++++||++++++ ++|+++.+.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 599999999997753
No 14
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.59 E-value=9.6e-14 Score=118.16 Aligned_cols=176 Identities=20% Similarity=0.328 Sum_probs=131.6
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
++..+.|+.+....|...++..++....+.|+..+.+...+.... ++...++.. ++++...+.+.++...++.+++.+
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 90 (292)
T COG0697 13 LLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPAL-RPWLLLLLLALLGLALPFLLLFLA 90 (292)
T ss_pred HHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccccc-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999887654666777777999999884444322 111111111 223455556666667899999999
Q ss_pred hcccCcceeeeeccchhHHHHHHHH-HHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAV-VFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~-~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
+++++++.++.+.++.|+++.++++ ++++||+++++ +.|+.+++.|+.++...+. .
T Consensus 91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~---~-------------- 147 (292)
T COG0697 91 LKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGG---G-------------- 147 (292)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCC---c--------------
Confidence 9999999999999999999999997 66799999999 5999999999988763211 0
Q ss_pred ccc-hhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHH-HHHH
Q 026352 161 HEN-WLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISA-WMNC 204 (240)
Q Consensus 161 ~~~-~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~ 204 (240)
+.+ ...|+.++++++++|+.+.+..|+.. +. ++..... ++..
T Consensus 148 ~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~ 191 (292)
T COG0697 148 GGILSLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL 191 (292)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH
Confidence 011 36899999999999999999999987 55 3555555 4554
No 15
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.59 E-value=1.2e-14 Score=107.20 Aligned_cols=128 Identities=14% Similarity=0.246 Sum_probs=113.3
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRP-KLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++++++||...++.|++.++ +||..-++.|-.+....+..++...++.+.+ ..+.|.|..+.+.|+.+ .+...+||.
T Consensus 9 LLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl~Yf~ 86 (140)
T COG2510 9 LLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWLLYFR 86 (140)
T ss_pred HHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHHHHHH
Confidence 57899999999999999986 9999999999999999988887765443322 24778899999999776 489999999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
+++.-+++...-+-.++|++++++++++++||++.++| +|+++..+|++++
T Consensus 87 ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~------iG~~LI~~Gailv 137 (140)
T COG2510 87 ALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTW------IGIVLIVIGAILV 137 (140)
T ss_pred HHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHH------HHHHHHHhCeeeE
Confidence 99999999999999999999999999999999999995 9999999998765
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.40 E-value=7.7e-12 Score=107.79 Aligned_cols=180 Identities=15% Similarity=0.095 Sum_probs=125.9
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
++++++||++++..|... +.++.++. |..++.+++..+.... |+.+ +..++.+..-++.|.+ ....+.+++.+
T Consensus 7 lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~-~~~~-~~~~~~~~~g~l~G~~-w~ig~~~~~~a 79 (290)
T TIGR00776 7 LIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIF-VLPE-FWALSIFLVGLLSGAF-WALGQINQFKS 79 (290)
T ss_pred HHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHH-hCCc-ccccHHHHHHHHHHHH-HHhhhhhHHHH
Confidence 567899999999999754 58887775 8888888776655443 2211 1112333333333443 45788999999
Q ss_pred hcccCcceeeeecc-chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352 82 MKYVHPTFMTAVVN-TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV 160 (240)
Q Consensus 82 l~~~~~~~a~ii~~-~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
+++++.+.+..+.+ +.|++..+.+.+++|||.+.+++ ..-++|+++.++|++++...++++.+ +..
T Consensus 80 i~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~--~~~~~g~~l~l~G~~l~~~~~~~~~~-----------~~~ 146 (290)
T TIGR00776 80 MRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQT--LLGLLALILIIIGVYLTSRSKDKSAG-----------IKS 146 (290)
T ss_pred HHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHH--HHHHHHHHHHHHhHheEEeccccccc-----------ccc
Confidence 99999999988887 88889999999999999988761 01138899999998776432211100 000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHH
Q 026352 161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNC 204 (240)
Q Consensus 161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~ 204 (240)
..+..+|.+++++|+++|+.|.+..|+. ++ +|...++.++.
T Consensus 147 ~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~ 187 (290)
T TIGR00776 147 EFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAI 187 (290)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHH
Confidence 0223579999999999999999999986 35 57777554444
No 17
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.31 E-value=2e-11 Score=103.06 Aligned_cols=124 Identities=19% Similarity=0.349 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCCh--HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNP--HIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYF 79 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (240)
++++++|+...+..|...++ .+| ..+..+|+.++.+++.+.....+++ +..+.+++......+.++....+.+++
T Consensus 134 l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (260)
T TIGR00950 134 LGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGTALAYFLWN 210 (260)
T ss_pred HHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999998765 664 4555578999999988887653322 233567777788888888778999999
Q ss_pred HhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHH
Q 026352 80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGV 134 (240)
Q Consensus 80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~ 134 (240)
+++++++++.++.+.+++|+++++++++++||+++.++ +.|..+.+.|+
T Consensus 211 ~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~ 259 (260)
T TIGR00950 211 KGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV 259 (260)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence 99999999999999999999999999999999999999 59998888875
No 18
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.28 E-value=3.8e-10 Score=94.86 Aligned_cols=155 Identities=13% Similarity=0.130 Sum_probs=123.1
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCC-C--CCCHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIR-P--KLTLAVFLEIFLLSLLGVSLALNLY 78 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (240)
+.+.++||..+...|. +++ .|+.++...|.+-+...++......++++. . .-++|.+..+.+.+.+. ..+...|
T Consensus 13 l~Ay~lwG~lp~y~kl-l~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~~nW~lf 89 (293)
T COG2962 13 LLAYLLWGLLPLYFKL-LEP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-GLNWWLF 89 (293)
T ss_pred HHHHHHHHHHHHHHHH-Hcc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-HHHHHHh
Confidence 4688999999999996 455 999999999999999888776655433221 1 12345566677777665 4799999
Q ss_pred HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352 79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN 158 (240)
Q Consensus 79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
.|+.++-.+-++|.-.+.+|++..++|++++|||+++-|| +++.++.+|+.......|
T Consensus 90 iWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~------iAV~lA~~GV~~~~~~~g---------------- 147 (293)
T COG2962 90 IWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQW------IAVGLAAAGVLIQTWLLG---------------- 147 (293)
T ss_pred heecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHcC----------------
Confidence 9999999999999999999999999999999999999994 999999999987664422
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 026352 159 SVHENWLKGSILTVASCILWSSFYIMQAFT 188 (240)
Q Consensus 159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~ 188 (240)
+..+ ..+.=+++|+.|....|+.
T Consensus 148 --~lpw-----val~la~sf~~Ygl~RK~~ 170 (293)
T COG2962 148 --SLPW-----VALALALSFGLYGLLRKKL 170 (293)
T ss_pred --CCcH-----HHHHHHHHHHHHHHHHHhc
Confidence 1222 3345578999999998775
No 19
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.28 E-value=6.6e-12 Score=93.21 Aligned_cols=104 Identities=25% Similarity=0.383 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHH
Q 026352 30 TYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVV 107 (240)
Q Consensus 30 ~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~ 107 (240)
.+|+..+.+.+..+...++|.+ .+..+++++......|.++...++.++++++++++ +.++.+.+++|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5799999999988877643321 22334456677777788886689999999999999 58889999999999999999
Q ss_pred HhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 108 FRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 108 ~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
++|||+++++ +.+++++++|++++...
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence 9999999999 59999999999887643
No 20
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.27 E-value=3.2e-10 Score=93.25 Aligned_cols=170 Identities=12% Similarity=0.097 Sum_probs=132.0
Q ss_pred HHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeee
Q 026352 13 FLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTA 92 (240)
Q Consensus 13 i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~i 92 (240)
-+.|-.... ++|.-.+++|..++.++++.+... .+.+.+++++..+...|.... .-+.+||.+++..+-+.+..
T Consensus 29 s~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvsLg-~MNl~FY~si~riPlGiAVA 102 (292)
T COG5006 29 SFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVSLG-GMNLLFYLSIERIPLGIAVA 102 (292)
T ss_pred HHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHHHH-HHHHHHHHHHHhccchhhhh
Confidence 355655665 999999999999999999887422 223567788888888888765 58889999999999999999
Q ss_pred eccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHH
Q 026352 93 VVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTV 172 (240)
Q Consensus 93 i~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l 172 (240)
+-++-|+.+++++. +| .+. ...+.+++.|+.++.-. +++. +..| ..|..+++
T Consensus 103 iEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p~-~~~~--------------~~lD-p~Gv~~Al 154 (292)
T COG5006 103 IEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLPL-GQSV--------------WSLD-PVGVALAL 154 (292)
T ss_pred hhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhheec-cCCc--------------CcCC-HHHHHHHH
Confidence 99999999887644 22 222 58888899999776522 2111 1223 68999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhc
Q 026352 173 ASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIV 217 (240)
Q Consensus 173 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 217 (240)
.++.||++|.+..||..+..+ .-+-+...+.+++++.+|+....
T Consensus 155 ~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ 198 (292)
T COG5006 155 GAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQ 198 (292)
T ss_pred HHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999886664 45677788999999999988744
No 21
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.19 E-value=1.3e-11 Score=102.15 Aligned_cols=192 Identities=17% Similarity=0.239 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 026352 6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI-RPKLTLAVFLEIFLLSLLGVSLALNLYFASMKY 84 (240)
Q Consensus 6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~ 84 (240)
.++-+..++.+..++ .||.+..-.|+++--++..|...+..+.. .|+-. .+++++.|+.|. ...+..|++++|
T Consensus 47 ~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~---R~~LiLRg~mG~-tgvmlmyya~~~ 120 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGK---RKWLILRGFMGF-TGVMLMYYALMY 120 (346)
T ss_pred HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCc---EEEEEeehhhhh-hHHHHHHHHHhh
Confidence 556666777776653 79999999997766666655433322111 12211 234566788886 477888999999
Q ss_pred cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccch
Q 026352 85 VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENW 164 (240)
Q Consensus 85 ~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (240)
.+-++|+++.+++|+++.+++|.++||+.++.+ .+|.++.+.|+++++ ++....+. +....+.+..+..
T Consensus 121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv-RPpFlFG~----~t~g~~~s~~~~~ 189 (346)
T KOG4510|consen 121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV-RPPFLFGD----TTEGEDSSQVEYD 189 (346)
T ss_pred cchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe-cCCcccCC----Ccccccccccccc
Confidence 999999999999999999999999999999988 599999999998765 31111110 0000011111223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Q 026352 165 LKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTI 215 (240)
Q Consensus 165 ~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (240)
..|...++.+++.-|...++.|++.|+. +.....-+..+.+.+.+++...
T Consensus 190 ~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~ 239 (346)
T KOG4510|consen 190 IPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCA 239 (346)
T ss_pred CCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHh
Confidence 5688899999999999999999998876 3333333444455555544443
No 22
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.17 E-value=1.7e-10 Score=99.71 Aligned_cols=128 Identities=15% Similarity=0.198 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 026352 71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKG 150 (240)
Q Consensus 71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~ 150 (240)
-++.+..+..++.+|+++..+++.+++.+|+..++.++..||.++.+ ++++.+++.|++++.+.+..+.+
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~---- 238 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNS---- 238 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEeccccccc----
Confidence 35788889999999999999999999999999999999999999988 79999999999888765332211
Q ss_pred CCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchh---HHHHHHHHHHHHHHHHHHH
Q 026352 151 APIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKL---SISAWMNCIGAAQSAVYTI 215 (240)
Q Consensus 151 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~ 215 (240)
+....+...|+++++++++.||+|+++.||..+++.... .+-.+..++..+++.|...
T Consensus 239 -------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~ 299 (416)
T KOG2765|consen 239 -------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI 299 (416)
T ss_pred -------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence 112334578999999999999999999999766552122 2223334444445554443
No 23
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.10 E-value=1.2e-09 Score=94.13 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
++++++|+...+..|...+ -++.....++..++++++.+.....+.......+.++|..+...++++....+.+|+++
T Consensus 156 l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~ 233 (292)
T PRK11272 156 LIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYL 233 (292)
T ss_pred HHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999997543 34566778899999988888765433221112356778888888998888899999999
Q ss_pred hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
+++.++++++.+.+++|++.+++++++++|+++..+ ++|..+.+.|+.+...
T Consensus 234 ~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 234 LRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 5999999999987653
No 24
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.09 E-value=1.8e-09 Score=93.16 Aligned_cols=129 Identities=11% Similarity=0.130 Sum_probs=103.8
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+.++++|+...+..|...++ .+|...... ..++++++.++...... ....+...+...+.+|+++..+.+.+++++
T Consensus 154 l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~ 229 (293)
T PRK10532 154 LGAGACWAIYILSGQRAGAE-HGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALPYSLEMIA 229 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcc-CCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999987654 888777544 45666667676554222 122345556556778999888999999999
Q ss_pred hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
+++++++.++.+.+++|++..++++++++|+++..+ ++|..+.+.|++....+
T Consensus 230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT 282 (293)
T ss_pred HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999 59999999999776544
No 25
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.99 E-value=5.3e-08 Score=84.41 Aligned_cols=187 Identities=19% Similarity=0.159 Sum_probs=137.5
Q ss_pred HHHHHHHhhhC-CCC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 026352 11 VYFLTEDSFNQ-GLN--PHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHP 87 (240)
Q Consensus 11 ~~i~~k~~~~~-~~~--p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 87 (240)
+.+.-+...+. ... |..+++.++....+.-.+.....++++. +++.++.....+++.. +...+-+.+++|+|.
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~al~~i~~ 90 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLFF-LASVLSNAALKYISY 90 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHHH-HHHHHHHHHHHhCCh
Confidence 44455544433 344 8899999999988877665543221222 2334556666777764 788999999999999
Q ss_pred ceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHH
Q 026352 88 TFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKG 167 (240)
Q Consensus 88 ~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 167 (240)
..-.++-+..|+.+++++.+++|+|.+.++ +.++++..+|+.+....+....+. .+....+...|
T Consensus 91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~---------~~~~~~~~~~G 155 (303)
T PF08449_consen 91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS---------SNSSSFSSALG 155 (303)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc---------cccccccchhH
Confidence 888888899999999999999999999999 599999999998876543211110 01111222349
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHh
Q 026352 168 SILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTII 216 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 216 (240)
+++.+.+.++-+...+.++|..++++ ++.....+..+++.+..++....
T Consensus 156 ~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 156 IILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876543 47788899999999888777766
No 26
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.95 E-value=7.3e-09 Score=89.45 Aligned_cols=126 Identities=9% Similarity=0.082 Sum_probs=97.0
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+.++++|+...+..|...++ .+|.... +..+++.+.+..... .......+.+.|..+...++ ...+.+.+|+++
T Consensus 162 l~aa~~~A~~~v~~k~~~~~-~~~~~~~---~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~-~t~~~~~l~~~a 235 (295)
T PRK11689 162 FIGAFIWAAYCNVTRKYARG-KNGITLF---FILTALALWIKYFLS-PQPAMVFSLPAIIKLLLAAA-AMGFGYAAWNVG 235 (295)
T ss_pred HHHHHHHHHHHHHHhhccCC-CCchhHH---HHHHHHHHHHHHHHh-cCccccCCHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 57889999999999986544 7887653 233444444433332 22122355677777777775 456799999999
Q ss_pred hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
++++++++++.+.+++|++..++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999 5999999999977653
No 27
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.91 E-value=1.3e-08 Score=87.26 Aligned_cols=127 Identities=13% Similarity=0.055 Sum_probs=87.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHH----HHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHI----YVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNL 77 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~----~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 77 (240)
++++++|+...+..|...++ .+|.. ...+.+...++.+.+....++++.. ..+...+......+.+...+.+.+
T Consensus 150 l~aal~~a~~~i~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~l~~~l 227 (281)
T TIGR03340 150 LAAALGTAIYSLSDKAAALG-VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-FPYARQILPSATLGGLMIGGAYAL 227 (281)
T ss_pred HHHHHHHHHhhhhccccccc-hhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999998875432 44432 2233333332222222221121111 112233344455566666689999
Q ss_pred HHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 78 YFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 78 ~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
+++++++.+++.++.+.+++|++..++++++++|+++..+ ++|..+.++|+.+
T Consensus 228 ~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~------~iG~~lil~Gv~l 280 (281)
T TIGR03340 228 VLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTR------LMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999 5999999999865
No 28
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.87 E-value=3.4e-08 Score=87.53 Aligned_cols=129 Identities=9% Similarity=0.190 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChH-HHHHHHHHHHHHHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPH-IYVTYRHAAGSLMMFPFAYFLERKIR----PKLTLAVFLEIFLLSLLGVSLALN 76 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~-~~~~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~ 76 (240)
+.++++|+...+..|...+. .||. ...++...++++.+.+.....++... ...+.. ...++..++. ..+.+.
T Consensus 195 l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-t~lay~ 271 (358)
T PLN00411 195 TIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-TSVYYV 271 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-HHHHHH
Confidence 46788999999999987665 6554 56667777777766655554333211 112222 2234445554 457888
Q ss_pred HHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 77 LYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 77 ~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
++++++++.+++.++.+.+++|++++++++++++|++++.+ ++|.++.+.|+.+...
T Consensus 272 lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 272 IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999 6999999999988653
No 29
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.83 E-value=5.9e-08 Score=83.91 Aligned_cols=130 Identities=9% Similarity=0.146 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCCh---HHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNP---HIYVTYRHAAGSLMMFPFAYFLERKI-----RPKLTLAVFLEIFLLSLLGVSL 73 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p---~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~ 73 (240)
+.++++|+...+..|...++ .++ .....+-...+.+.+.......++.. ....+.+.|..++.+|+++...
T Consensus 149 l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~ 227 (299)
T PRK11453 149 LAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIV 227 (299)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence 57889999999999986543 322 23334444444443333322222211 1234667888889999999989
Q ss_pred HHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 74 ALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 74 ~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
.+.+++.++++.++++++.+.+++|++..++++++++|+++..+ ++|..+.++|+.+..
T Consensus 228 ~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 228 GYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 599999999997643
No 30
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.74 E-value=3.5e-08 Score=85.38 Aligned_cols=132 Identities=11% Similarity=0.168 Sum_probs=99.2
Q ss_pred hhHHHHHHHHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---------CCHHH-HHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQ-GLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPK---------LTLAV-FLEIFLLSLLG 70 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~---------~~~~~-~~~~~~~g~~~ 70 (240)
++++++|+...+..|...++ +.||..+..+....+.+.++|+....+...... ..... +...+..+...
T Consensus 151 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (302)
T TIGR00817 151 MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGF 230 (302)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Confidence 56889999999999987651 499999999999999999999876533211000 00011 11122333322
Q ss_pred HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
....+.+++.+++++++..+++.....|++++++++++++|+++..+ ++|..+.+.|+.+...
T Consensus 231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence 33344677889999999999999999999999999999999999999 5999999999977653
No 31
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.73 E-value=2.9e-07 Score=77.40 Aligned_cols=152 Identities=15% Similarity=0.190 Sum_probs=112.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352 56 TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM 135 (240)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~ 135 (240)
++|+..+..+-+++.. ..+.+.+.++++.+++.-.++..+-.+++++++++++|+|++.+|| .++.+-++|+.
T Consensus 13 ~~~~~~~~~vPA~lY~-~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW------~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYA-IQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQW------LALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHh
Confidence 4567777777788864 7999999999999999999999999999999999999999999995 99999999997
Q ss_pred HHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHH
Q 026352 136 VIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYT 214 (240)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~ 214 (240)
++...+.+..+..++++.. .+..+.+...|.++.+.++++-+.-.++.+|..|+.+ +....+...+++|.+..++..
T Consensus 86 lv~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~ 163 (244)
T PF04142_consen 86 LVQLSSSQSSDNSSSSSVH--HDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLAL 163 (244)
T ss_pred eeecCCccccccccccccc--cccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Confidence 7643311110000000000 0111234578999999999999999999999877652 355666677777777776654
Q ss_pred Hh
Q 026352 215 II 216 (240)
Q Consensus 215 ~~ 216 (240)
..
T Consensus 164 ~~ 165 (244)
T PF04142_consen 164 LL 165 (244)
T ss_pred hc
Confidence 43
No 32
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.55 E-value=1e-06 Score=76.18 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHHHHHhhhCC-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQG-LNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++++++|+...+..|...++. .++.....+-..++.+...+.... ........+...+......|+. ....+.+++.
T Consensus 155 l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-t~i~~~~~~~ 232 (296)
T PRK15430 155 LGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADS-STSHMGQNPMSLNLLLIAAGIV-TTVPLLCFTA 232 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccC-CcccccCCcHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 567899999999998754321 122333333333333332221100 0000111122233444445654 4579999999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
++++.+++.++.+.+++|++..++++++++|+++..+ ++|..+.++|+.++..
T Consensus 233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~------~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK------MVTFAFIWVALAIFVM 285 (296)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 5999999888877653
No 33
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.48 E-value=2.2e-06 Score=66.44 Aligned_cols=128 Identities=21% Similarity=0.328 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CC-------CHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQ------GLNPHIYVTYRHAAGSLMMFPFAYFLERKIRP----KL-------TLAVFLEIF 64 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~-------~~~~~~~~~ 64 (240)
+.+.++-+...+..|..+++ ..+|..+..+-...+.++++|.....++.+.. .. ..+.+..++
T Consensus 6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (153)
T PF03151_consen 6 LASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLI 85 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHH
Confidence 45677888889998888766 78999999999999999999988776543310 01 123445566
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
..|++.. ..+...+.-++++++...++....-.+.+.++++++++|+++.++ +.|+.+++.|..+
T Consensus 86 ~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 86 LSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 6677764 799999999999999999999999999999999999999999999 6999999999853
No 34
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.47 E-value=2.6e-06 Score=75.39 Aligned_cols=130 Identities=13% Similarity=0.177 Sum_probs=94.2
Q ss_pred hhHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------CCCCHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQ------GLNPHIYVTYRHAAGSLMMFPFAYFLERKIR-----------PKLTLAVFLEIF 64 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----------~~~~~~~~~~~~ 64 (240)
++++++|+...+..|..+++ ..++..+..+-...++++++|+....+..+. ............
T Consensus 200 l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i 279 (350)
T PTZ00343 200 MLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKI 279 (350)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHH
Confidence 56789999999999998754 2567767777788999999998764432110 000111111122
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
..+.+...+.+.+-|++++++++..+++..++.|+++.++++++++|+++..+ ++|..+.+.|+.+.
T Consensus 280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY 346 (350)
T PTZ00343 280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence 22222223445555579999999999999999999999999999999999999 69999999999764
No 35
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.46 E-value=8e-07 Score=76.96 Aligned_cols=179 Identities=15% Similarity=0.122 Sum_probs=137.8
Q ss_pred HHHHhhh--CCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceee
Q 026352 14 LTEDSFN--QGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMT 91 (240)
Q Consensus 14 ~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ 91 (240)
..|..++ +---|..++..++.++.+.+......+.++..+..++..+..++.+|++.. ....+-..++++.+++..-
T Consensus 35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~-~~~v~~n~Sl~~v~VsF~q 113 (316)
T KOG1441|consen 35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC-ISHVLGNVSLSYVPVSFYQ 113 (316)
T ss_pred eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH-HHHHhcchhhhccchhHHH
Confidence 3566666 333488889999999988887766554333333234456777888888875 6888889999999999999
Q ss_pred eeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHH
Q 026352 92 AVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILT 171 (240)
Q Consensus 92 ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 171 (240)
.+=.++|+++.++++++.+|+.+...+ ..++....|+.+-... ..+.+ ..|...+
T Consensus 114 ~iKa~~P~~tvl~~~~~~~~~~s~~~~------lsL~piv~GV~ias~~------------------e~~fn-~~G~i~a 168 (316)
T KOG1441|consen 114 TIKALMPPFTVLLSVLLLGKTYSSMTY------LSLLPIVFGVAIASVT------------------ELSFN-LFGFISA 168 (316)
T ss_pred HHHhhcchhHHHHHHHHhCCCCcceEE------EEEEEeeeeEEEeeec------------------ccccc-HHHHHHH
Confidence 999999999999999999999998884 7777777787543311 01234 6899999
Q ss_pred HHHHHHHHHHHHHHhhhhh----cCCchhHHHHHHHHHHHHHHH-HHHHhccC
Q 026352 172 VASCILWSSFYIMQAFTLK----KYPAKLSISAWMNCIGAAQSA-VYTIIVQP 219 (240)
Q Consensus 172 l~a~~~~a~~~v~~k~~~~----~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 219 (240)
+.+.+..+..+++.|+..+ +. +++....++.-++.+.++ |.....|+
T Consensus 169 ~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~ 220 (316)
T KOG1441|consen 169 MISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEG 220 (316)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcc
Confidence 9999999999999999763 24 578888888889988888 77665544
No 36
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.46 E-value=3.1e-06 Score=71.77 Aligned_cols=126 Identities=14% Similarity=0.230 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVT-YRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
+.+++.|+...+..|... + .++..... +....+.....+... ..+. ...+.+++......|+++....+.+++.
T Consensus 160 l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (292)
T COG0697 160 LAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYY 234 (292)
T ss_pred HHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999998765 3 77777776 444422232222221 1111 2345677888888899987679999999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
+++..+++..+.+.++.|++..++++++++|+++.++ ++|..+.+.|+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999 599988888887654
No 37
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.41 E-value=8.4e-09 Score=85.16 Aligned_cols=187 Identities=19% Similarity=0.254 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352 7 CVASVYFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV 85 (240)
Q Consensus 7 ~wg~~~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 85 (240)
+-+.++.....+-+ ++| |..-.+.-+..-+++-.++..+|. +.. ...|...++++++..- .+.+...+.|||
T Consensus 30 ~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~---~~~~~hYilla~~DVE-aNy~vV~AyQyT 102 (336)
T KOG2766|consen 30 ITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--KYI---KAKWRHYILLAFVDVE-ANYFVVKAYQYT 102 (336)
T ss_pred HHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--HHH---HHHHHHhhheeEEeec-ccEEEeeehhhc
Confidence 33444444444333 343 667777888777777777776632 211 2234457777888764 565667899999
Q ss_pred CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchh
Q 026352 86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWL 165 (240)
Q Consensus 86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (240)
+.+....+-.-.-+-+.+++|+++|-|-.+.+ +.|+++|..|++++++.+-.. ++..++.+..
T Consensus 103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-----------gd~aggsnp~ 165 (336)
T KOG2766|consen 103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-----------GDRAGGSNPV 165 (336)
T ss_pred chHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-----------ccccCCCCCc
Confidence 98888877655444556789999999988887 799999999998887542111 1223345557
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 166 KGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 166 ~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
+||++.++++.+||..++..+...|+. +...++....++|++++.+- ..++.
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ-~i~~~ 217 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQ-FIFER 217 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHH-Hhhhc
Confidence 899999999999999999999999998 47788889999999999877 55555
No 38
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.40 E-value=2.4e-06 Score=73.72 Aligned_cols=122 Identities=10% Similarity=0.077 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHH---HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHA---AGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLY 78 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~---~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (240)
+++.+.++...+..|.. + .||....+.... +++.++.+.. + +.+|. ..+......+.|++ ....+.+|
T Consensus 158 l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~~-~~~~~~~~~~~Gi~-~~ia~~~y 228 (290)
T TIGR00776 158 LMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKPL-KKYAILLNILPGLM-WGIGNFFY 228 (290)
T ss_pred HHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH--h--cccch-HHHHHHHHHHHHHH-HHHHHHHH
Confidence 46788999999999964 3 889888554444 4444433322 1 11222 23344445558888 46899999
Q ss_pred HHhhc-ccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccch----hhHHHHHHHHHHHH
Q 026352 79 FASMK-YVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKI----LGTLASLVGVMVIA 138 (240)
Q Consensus 79 ~~~l~-~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~i~~~G~~~~~ 138 (240)
+.+.+ +.+++.++++.+.+|+...+.+++++||+.++++ + +|.++.+.|+.++.
T Consensus 229 ~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 229 LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence 99999 9999999999999999999999999999999999 6 88888888887654
No 39
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.38 E-value=9.8e-07 Score=65.19 Aligned_cols=68 Identities=19% Similarity=0.199 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
..++++....+.++..++++.|.+.+..+.++.|+++.+.+++++|||++.++ ++|+.+.++|++++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 34446666799999999999999999999999999999999999999999999 599999999997764
No 40
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.30 E-value=0.00028 Score=61.39 Aligned_cols=199 Identities=14% Similarity=0.094 Sum_probs=137.4
Q ss_pred hhHHHHHHHHHHHHHHhhhCC---CChHHHHHHHHHHHHHHHHHHHHHHhcC---C-CCC------CCHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQG---LNPHIYVTYRHAAGSLMMFPFAYFLERK---I-RPK------LTLAVFLEIFLLSL 68 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~---~-~~~------~~~~~~~~~~~~g~ 68 (240)
++..+.++......|+.-..+ +.|....+.--++-.++.....+...|+ + .+. ..+++.....+-++
T Consensus 21 ~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~ 100 (345)
T KOG2234|consen 21 IVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPAL 100 (345)
T ss_pred HHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHH
Confidence 344566777788888876655 6677777777777766665555544322 1 111 13445556666666
Q ss_pred HHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCC
Q 026352 69 LGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSL 148 (240)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~ 148 (240)
+. ++.+.++|.++.+.+++.-.+...+--+-++++..+++++|++++|| .++++.+.|+.++-....+..+.
T Consensus 101 iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw------~Al~lL~~Gv~~vQ~~~~~~~~a- 172 (345)
T KOG2234|consen 101 IY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQW------MALVLLFAGVALVQLPSLSPTGA- 172 (345)
T ss_pred HH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHhccCCCCCCc-
Confidence 75 47888999999999999999999999999999999999999999995 99999999997764211111100
Q ss_pred CCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHH
Q 026352 149 KGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTI 215 (240)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~ 215 (240)
.++....+...|....+.++..=+.-.++.+|+.|+-. +....+.-.+++|.+..+....
T Consensus 173 -------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~ 233 (345)
T KOG2234|consen 173 -------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL 233 (345)
T ss_pred -------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 01122344578999999999999999999999886532 2444555555566655544443
No 41
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.08 E-value=2e-05 Score=65.32 Aligned_cols=125 Identities=11% Similarity=0.125 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+.+..+|+..-+.+|.+-+. .+--.-...-+.+|+++.+|+..-+... .-.+.+....-+..+++...+.|.+-..+
T Consensus 154 l~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSSalPYsLEmiA 230 (292)
T COG5006 154 LGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSSALPYSLEMIA 230 (292)
T ss_pred HHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhcccchHHHHHH
Confidence 45778999999999987643 5666677888999999999987543221 12344555666778899999999999999
Q ss_pred hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM 135 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~ 135 (240)
++..+...-+++.+++|.+.++.++++++|+++..|| +++...+++..
T Consensus 231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qw------laI~~ViaAsa 278 (292)
T COG5006 231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQW------LAIAAVIAASA 278 (292)
T ss_pred HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHH------HHHHHHHHHHh
Confidence 9999999999999999999999999999999999995 88777666553
No 42
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.06 E-value=5.5e-05 Score=63.74 Aligned_cols=185 Identities=14% Similarity=0.151 Sum_probs=126.0
Q ss_pred HHHHHHHHhhh---CCCC----hHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------------CCHHHHHHHHHHHHH
Q 026352 10 SVYFLTEDSFN---QGLN----PHIYVTYRHAAGSLMMFPFAYFLERKIRPK-------------LTLAVFLEIFLLSLL 69 (240)
Q Consensus 10 ~~~i~~k~~~~---~~~~----p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~ 69 (240)
.+.+.+|++-+ +|-| |+..+..-|+--++.+..+.+++.|...+. .+.+... .+.-+++
T Consensus 17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l-fl~Pal~ 95 (372)
T KOG3912|consen 17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL-FLPPALC 95 (372)
T ss_pred HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce-ecChHHH
Confidence 45667776532 1223 555555555555666666666654432211 0122211 2224556
Q ss_pred HHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCC
Q 026352 70 GVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLK 149 (240)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~ 149 (240)
.. ....+.|.|+.+|+++.-..+-...-+++.+++..++|++++.+|| +|+.....|.+.+...+-....++
T Consensus 96 Di-~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qW------l~i~fv~lGlviVg~~d~~~~~~p- 167 (372)
T KOG3912|consen 96 DI-AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQW------LGILFVSLGLVIVGSLDVHLVTDP- 167 (372)
T ss_pred HH-hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhH------HHHHHHHhhhheeeeeecccccCC-
Confidence 54 5778889999999999888888889999999999999999999995 999999999977643210000000
Q ss_pred CCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHH
Q 026352 150 GAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSA 211 (240)
Q Consensus 150 ~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~ 211 (240)
...-.+...|+.+.+.+-+.-|...++-+|..++.. +|.....|+-++|.+.+.
T Consensus 168 --------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~s 222 (372)
T KOG3912|consen 168 --------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILS 222 (372)
T ss_pred --------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHH
Confidence 001134578999999999999999999999776542 589999999999955443
No 43
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=97.83 E-value=0.00017 Score=61.42 Aligned_cols=170 Identities=15% Similarity=0.171 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHH
Q 026352 25 PHIYVTYRHAAGSLMMFPFAYFLERKI---RPKLTLAVF-LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCM 100 (240)
Q Consensus 25 p~~~~~~R~~~a~l~l~~~~~~~~~~~---~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~ 100 (240)
|+.++.....+-.++-...-...+++. +...+|++- ++...+|+.. +..-.+-.++++|++.+.-+..=++.++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 777777776665554433322222211 224566654 4566677765 57888999999999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHH----HHH
Q 026352 101 TFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVA----SCI 176 (240)
Q Consensus 101 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~----a~~ 176 (240)
+.+++..+.-||.++.- ..-.++..+|+.+.+.. . .+.+ ..|..++++ +++
T Consensus 124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~K-s-----------------Tqf~-i~Gf~lv~~aS~~sGl 178 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK-S-----------------TQFN-IEGFFLVLAASLLSGL 178 (349)
T ss_pred HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec-c-----------------ccee-ehhHHHHHHHHHhhhh
Confidence 99999999999988753 23333333444443322 1 1222 456666654 455
Q ss_pred HHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352 177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPK 220 (240)
Q Consensus 177 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 220 (240)
-|+....+.|+-....++|........-.-.+.++|....+|+.
T Consensus 179 RW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~ 222 (349)
T KOG1443|consen 179 RWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGL 222 (349)
T ss_pred hHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHccc
Confidence 56666666665442223566666655556666677877778774
No 44
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.81 E-value=0.00027 Score=62.02 Aligned_cols=132 Identities=18% Similarity=0.088 Sum_probs=99.1
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKL--TLAVFLEIFLLSLLGVSLALNLY 78 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~ 78 (240)
++.+++++|.+.+.-|+..++ .|+.++...=-+++.++..+.....+|+...+. +.+....++.-+ +..+..+.+.
T Consensus 173 ~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~~lf~~y~l~ 250 (334)
T PF06027_consen 173 ALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-LCLFLFYSLV 250 (334)
T ss_pred HHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-HHHHHHHHHH
Confidence 367899999999999998876 898888777677777777776666666554333 333333222222 2334566666
Q ss_pred HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
-..+++++|+...+=.-+..++..++++++++|++++.. ++|.++..+|.++....
T Consensus 251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEcc
Confidence 778999999988887888999999999999999999987 69999999999776543
No 45
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.75 E-value=5.3e-05 Score=57.44 Aligned_cols=70 Identities=19% Similarity=0.390 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHH--HhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 63 IFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVV--FRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 63 ~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~--~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
.+..|+....+.+.++..++++.+.+.+.-+.+..+.++.+.++. +++|++++++ ++|+.+.++|++++.
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 456778888899999999999999999999999998888888885 7999999999 599999999998865
No 46
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.64 E-value=0.0017 Score=55.80 Aligned_cols=190 Identities=17% Similarity=0.172 Sum_probs=132.7
Q ss_pred hHHHHHHHHH----HHHHHhhhC-CCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026352 3 LLQICVASVY----FLTEDSFNQ-GLNPHIY-VTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALN 76 (240)
Q Consensus 3 ~~~~~wg~~~----i~~k~~~~~-~~~p~~~-~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 76 (240)
.+++.++.+. ++-|.++.+ +.|.... ..++.....+.+...-.. +--+.++++++..++.+...++.. +...
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf~-~~i~ 92 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLFV-GMLF 92 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHHH-HHHH
Confidence 3455555544 456777765 3443332 247777666665543221 111134577787777777777754 5666
Q ss_pred HHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccC
Q 026352 77 LYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLG 156 (240)
Q Consensus 77 ~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
.-..+++|.+...-+++=...|+++++....+++.|.+... +..+....+|.......+
T Consensus 93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d--------------- 151 (314)
T KOG1444|consen 93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD--------------- 151 (314)
T ss_pred HccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc---------------
Confidence 66779999999999999999999999999999997777666 488888887775543221
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 157 TNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 157 ~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
...+ ..|..+.+...++-+.+.+..|+..+... +...++.+..+.+.........++|+
T Consensus 152 ---~sf~-~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge 211 (314)
T KOG1444|consen 152 ---LSFN-LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGE 211 (314)
T ss_pred ---ceec-chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcc
Confidence 1122 35899999999999999999999765421 35677888888888888777777765
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.53 E-value=0.00014 Score=58.33 Aligned_cols=96 Identities=18% Similarity=0.270 Sum_probs=81.3
Q ss_pred HHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 026352 73 LALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAP 152 (240)
Q Consensus 73 ~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~ 152 (240)
..+..|..+++..+++.++.+.....-++.+++++.+++|....+ +++.+++..|++++... +
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~-D---------- 127 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYA-D---------- 127 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEec-c----------
Confidence 567788999999999999999999999999999999999998877 79999999888765422 1
Q ss_pred cccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352 153 IHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKK 191 (240)
Q Consensus 153 ~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~ 191 (240)
....+.+.|..++..++..-|+|.++-|+...+
T Consensus 128 ------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn 160 (290)
T KOG4314|consen 128 ------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGN 160 (290)
T ss_pred ------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 122334789999999999999999999987654
No 48
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.50 E-value=0.017 Score=49.08 Aligned_cols=126 Identities=17% Similarity=0.144 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchh---hHHHHHHH
Q 026352 58 AVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKIL---GTLASLVG 133 (240)
Q Consensus 58 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~---g~~i~~~G 133 (240)
+.+..-++.|++= ...+...+.+.++.+.+++.=+. ...=+.+.+.+.++++|.-+.+++ ++ ++++.++|
T Consensus 43 ~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~-----~~G~~Al~liiiG 116 (269)
T PF06800_consen 43 TSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK-----IIGFLALVLIIIG 116 (269)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH-----HHHHHHHHHHHHH
Confidence 6777777777775 57999999999999999998775 456666888999999998877664 43 44555667
Q ss_pred HHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHH
Q 026352 134 VMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMN 203 (240)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~ 203 (240)
+.+....++++.. .+...+...|....+.+++.|-.|.++.|.. +. ++...-.-|.
T Consensus 117 v~lts~~~~~~~~-----------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~-~~~~~~lPqa 172 (269)
T PF06800_consen 117 VILTSYQDKKSDK-----------SSSKSNMKKGILALLISTIGYWIYSVIPKAF--HV-SGWSAFLPQA 172 (269)
T ss_pred HHHhccccccccc-----------cccccchhhHHHHHHHHHHHHHHHHHHHHhc--CC-ChhHhHHHHH
Confidence 7654433221110 0112344679999999999999999998763 33 3555555443
No 49
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.35 E-value=0.0024 Score=53.80 Aligned_cols=102 Identities=7% Similarity=0.086 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYF 79 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (240)
+.++++|+...+..|...++ ++......... ......+.... .... ......++|..++..|++ ....+.+++
T Consensus 152 l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~ 226 (256)
T TIGR00688 152 LVLAFSFTAYGLIRKALKNT--DLAGFCLETLS-LMPVAIYYLLQ-TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFV 226 (256)
T ss_pred HHHHHHHHHHHHHHhhcCCC--CcchHHHHHHH-HHHHHHHHHHH-hccCcccccCchhHHHHHHHHHHH-HHHHHHHHH
Confidence 56789999999999875432 33222221111 11111111111 1111 111223578888888887 458999999
Q ss_pred HhhcccCcceeeeeccchhHHHHHHHHHH
Q 026352 80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVF 108 (240)
Q Consensus 80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~ 108 (240)
+++++.+++.++.+.+++|++..+++.+.
T Consensus 227 ~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 227 IAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
No 50
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.16 E-value=0.023 Score=50.15 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHH-HHHHHHHHHH--HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHA-AGSLMMFPFA--YFLERKI---RPKLTLAVFLEIFLLSLLGVSLAL 75 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~-~a~l~l~~~~--~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~ 75 (240)
+++.++||+.++-.|. .++ .+ .+.-+.-.. ++. ++.|+. ....+.. ....+.+.+..-++.|.+= ...+
T Consensus 13 ~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~w-l~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W-~iG~ 87 (345)
T PRK13499 13 LIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSW-LILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALW-GIGG 87 (345)
T ss_pred HHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHH-Hhhh
Confidence 4688999999999997 332 33 222222111 111 111211 1111110 1124556667767777765 4799
Q ss_pred HHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccc---cccCCCCccchhhHHHHHHHHHHHHHh---cCCCCCCC
Q 026352 76 NLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIV---DVRSPRGIAKILGTLASLVGVMVIAFY---KGPAVPSL 148 (240)
Q Consensus 76 ~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~---~~~~~~~~~~~~g~~i~~~G~~~~~~~---~~~~~~~~ 148 (240)
..++.++++.+.+.+.-+ ..+.-+...+++.++++|-. +-++ .+.-++|+++.++|+.+.... +++....
T Consensus 88 i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~- 164 (345)
T PRK13499 88 ITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQLKERKMGI- 164 (345)
T ss_pred hhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhhccccccc-
Confidence 999999999999988765 56788888889998888754 3333 233468888889999876541 1111000
Q ss_pred CCCCcccCCCccccchhHHHHHHHHHHHHHHHHH
Q 026352 149 KGAPIHLGTNSVHENWLKGSILTVASCILWSSFY 182 (240)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~ 182 (240)
++..+.+..+|.++++.+++.++.|.
T Consensus 165 --------~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 165 --------KKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred --------ccccccchHhHHHHHHHHHHHHHHHH
Confidence 00123455789999999999999999
No 51
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.11 E-value=0.0014 Score=48.34 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=76.0
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++++.++||.+..+.|.+.+. .++..-.. |..-.... + .+++.+.+ .+...-.....|++
T Consensus 1 ~l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 1 LLLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred CeeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHH
Confidence 567899999999999998865 55544331 32111111 0 11222322 22223368888999
Q ss_pred hhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 81 ~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
.+...+.+.+.-+. ++.=+++++.++++.+|..++++ ++|+.+.+.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeee
Confidence 99999999999885 77888888888877777777776 5999999988754
No 52
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.07 E-value=0.0097 Score=50.31 Aligned_cols=173 Identities=16% Similarity=0.124 Sum_probs=111.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccch
Q 026352 24 NPHIYVTYRHAAGSLMMFPFAYFLER----KIRPK--LTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTI 97 (240)
Q Consensus 24 ~p~~~~~~R~~~a~l~l~~~~~~~~~----~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~ 97 (240)
.|....+++.++...+-..+-....+ ...|+ ++.+..+.+.-+.+.-. +.-.+-...++|.+++.--+--++.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceehhhcceEEEEeccchh
Confidence 37778888877766554443322111 11222 33333333333333322 2333345788999988877778899
Q ss_pred hHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHH
Q 026352 98 PCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCIL 177 (240)
Q Consensus 98 P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~ 177 (240)
-+|+.+++++++|+|-+..- ..+..+.+.|--+ |-.++ ...+.-...|.+++..|.++
T Consensus 139 tvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~l-----GvdqE-----------~~~~~ls~~GvifGVlaSl~ 196 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGL-----GVDQE-----------GSTGTLSWIGVIFGVLASLA 196 (347)
T ss_pred hhHHHHhHHhhccccccccc------ceeehhheehhee-----ccccc-----------cccCccchhhhHHHHHHHHH
Confidence 99999999999999988766 3444333333311 21110 01122236899999999999
Q ss_pred HHHHHHHHhhhhhcC-CchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 178 WSSFYIMQAFTLKKY-PAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 178 ~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
-|+..+..||..... +.....+.+..+.+.++++|...+.++
T Consensus 197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge 239 (347)
T KOG1442|consen 197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE 239 (347)
T ss_pred HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch
Confidence 999999999875543 236689999999999999998887655
No 53
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.90 E-value=0.0074 Score=49.95 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 026352 71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKG 150 (240)
Q Consensus 71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~ 150 (240)
..+.+..-..+++|.|=-...+--+.-|+=++++++++.+++-+|++ -..+++.++|+.+....++...+
T Consensus 95 YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~g---- 164 (337)
T KOG1580|consen 95 YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVGG---- 164 (337)
T ss_pred HHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHH------HHHHHHHHHHHHHhhccccccCC----
Confidence 34677788899999986555555678899999999999999988888 49999999999886544332211
Q ss_pred CCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 151 APIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 151 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
..+.....|+++.+++-..=++....+.++++.+. +.-+++.+..+.+.+.+..-.+++++
T Consensus 165 --------~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE 226 (337)
T KOG1580|consen 165 --------AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE 226 (337)
T ss_pred --------CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh
Confidence 12334568999999999999999999999876542 35578888888888877665555543
No 54
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.83 E-value=0.014 Score=50.64 Aligned_cols=130 Identities=16% Similarity=0.216 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHHHHHHhhh-CCCChHHHHHHHHHHHHHHHHHHHHH--Hhc-CCCCC---CCHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFN-QGLNPHIYVTYRHAAGSLMMFPFAYF--LER-KIRPK---LTLAVFLEIFLLSLLGVSLA 74 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~-~~~~~---~~~~~~~~~~~~g~~~~~~~ 74 (240)
++..++-|...+.-|...+ ++.++.+..++-...+.+..++.... .+. ++..+ ...+.+..++...+.+. ..
T Consensus 160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~-~g 238 (303)
T PF08449_consen 160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGA-LG 238 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHH-HH
Confidence 3456667777887777774 47899999999999998887776655 211 11000 11223455566666664 57
Q ss_pred HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
+.+.+.-.+..++...+++..+--+.+.+++.+++++++++.+| .|+++.+.|..+=.
T Consensus 239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~------~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQW------IGIVLVFAGIFLYS 296 (303)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHH------HHHHHhHHHHHHHH
Confidence 77777888999999999999999999999999999999999995 99999999996643
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.73 E-value=0.038 Score=47.11 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 3 LLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 3 ~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
..++-||..+..=|.. .+|+.+=...-...-.+.-+.+....+... ...-+.+.+..+...|.+. ++...+|..
T Consensus 155 ~la~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT-avpL~lf~~ 230 (293)
T COG2962 155 ALALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT-AVPLLLFAA 230 (293)
T ss_pred HHHHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH-HHHHHHHHH
Confidence 4566777777776642 367665444444443333333332222211 1112446677788889886 489999999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
|-+.++-+..+.++|.+|.+..+++.++++|+++..+ ....+..-.|.++..
T Consensus 231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~------~~~F~~IW~aL~l~~ 282 (293)
T COG2962 231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQ------LVTFAFIWLALALFS 282 (293)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988 476666666776554
No 56
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.55 E-value=0.01 Score=50.41 Aligned_cols=108 Identities=10% Similarity=0.028 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMF-PFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
++..+.+.....+.|.. + +||.....-+ .++-++-. .+....+++.+ .++.++. .+.|++- ...+.+++.
T Consensus 144 l~stigy~~Y~~~~~~~--~-~~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~---~k~~~~n-il~G~~w-~ignl~~~i 214 (269)
T PF06800_consen 144 LISTIGYWIYSVIPKAF--H-VSGWSAFLPQ-AIGMLIGAFIFNLFSKKPFF---EKKSWKN-ILTGLIW-GIGNLFYLI 214 (269)
T ss_pred HHHHHHHHHHHHHHHhc--C-CChhHhHHHH-HHHHHHHHHHHhhccccccc---ccchHHh-hHHHHHH-HHHHHHHHH
Confidence 45566677777777752 3 7777666544 22222222 22222211112 2233333 4456664 368899999
Q ss_pred hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCC
Q 026352 81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSP 118 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~ 118 (240)
+.+..+.+.+-.+..+.+++..+.+.+++||+-++|++
T Consensus 215 s~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~ 252 (269)
T PF06800_consen 215 SAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM 252 (269)
T ss_pred hHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH
Confidence 99999999999999999999999999999999887773
No 57
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.50 E-value=0.0054 Score=45.81 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHhhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 67 SLLGVSLALNLYFASMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 67 g~~~~~~~~~~~~~~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
.+.+....+.++..++++.|.+.+=.+. ...-+.+++.++++++|++++.+ ++|+.+.++|++.+-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 3444557888999999999999887664 57888899999999999999999 5999999999987643
No 58
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.49 E-value=0.0068 Score=44.58 Aligned_cols=66 Identities=17% Similarity=0.263 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 68 LLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
+.+....+.++..++++.|.+.+=.+ ..+.-+.+++.++++++|++++.+ ++|+.+.++|++.+..
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 44455788888999999999888665 457788889999999999999999 5999999999988753
No 59
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.11 E-value=0.011 Score=42.94 Aligned_cols=64 Identities=20% Similarity=0.225 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 69 LGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
.+....+.+.-.++|+.|.+.+=.+ ...--+.+++.++++++|+++..+ ++|+.+.++|++.+-
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 3344688889999999998887544 567888899999999999999998 699999999997764
No 60
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.10 E-value=0.0032 Score=53.01 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352 6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV 85 (240)
Q Consensus 6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 85 (240)
+.=+..+++.|+.-++ .+.+.-..+--.++.+.-+..+.....-.+| -.+|||+.+..+|++|. .+|.+...|+|.-
T Consensus 201 lf~asvyIilR~iGk~-~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lGvfgf-igQIllTm~lQiE 277 (346)
T KOG4510|consen 201 LFGASVYIILRYIGKN-AHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLGVFGF-IGQILLTMGLQIE 277 (346)
T ss_pred hhhhhHHHHHHHhhcc-ccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEehhhhh-HHHHHHHHHhhhh
Confidence 3334556677764333 6766666666666666555444332322233 35677887888899985 8999999999999
Q ss_pred CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
-++..+++.++.-++..+.-.++++|.+++..| .|.++.+...+.+...
T Consensus 278 rAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~------~Ga~~vvsS~v~~a~~ 326 (346)
T KOG4510|consen 278 RAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSW------VGAVMVVSSTVWVALK 326 (346)
T ss_pred ccCCeehhhHHHHHHHHHHHHHHhcCCChHHHh------hceeeeehhHHHHHHH
Confidence 999999999999999999999999999999885 8888877777666654
No 61
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.08 E-value=0.078 Score=38.88 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 69 LGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
.+....+.+.-.++|+.|.+.+=.+ ...--+.+++.+++++||++++.+ ++|+.+.+.|++.+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 3344678888899999998887644 457778889999999999999999 59999999999765
No 62
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.27 Score=42.32 Aligned_cols=167 Identities=18% Similarity=0.185 Sum_probs=108.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeecc----chhH
Q 026352 24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVN----TIPC 99 (240)
Q Consensus 24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~----~~P~ 99 (240)
+|..+.+.+-+.+.+.-... .+.++..+ ...+.|......++.+. +...|-+.+++|.+= -+-+.. ..|+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~--l~~~k~~~-~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSy--Ptq~LaKscKmIPV 123 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAM--LKWWKKEL-SGVAPLYKYSLISFTNT-LSSWCGYEALKYVSY--PTQTLAKSCKMIPV 123 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHH--HhcccccC-CCCCchhHHhHHHHHhh-cchHHHHHHHHhccc--hHHHHHHHhhhhHH
Confidence 46666666666666655332 22232221 22345666777788875 788999999999972 222221 4554
Q ss_pred HHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHH
Q 026352 100 MTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWS 179 (240)
Q Consensus 100 ~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a 179 (240)
++++.++.++|.+.++. ..+.++ -.|+.+....+... .. ...++.+...|..++...-+.=+
T Consensus 124 --mlmg~Lvy~~ky~~~eY-----l~~~LI-s~GvsiF~l~~~s~-s~---------~~~g~~ns~~G~~Ll~~~L~fDg 185 (327)
T KOG1581|consen 124 --MLMGTLVYGRKYSSFEY-----LVAFLI-SLGVSIFSLFPNSD-SS---------SKSGRENSPIGILLLFGYLLFDG 185 (327)
T ss_pred --HHHHHHHhcCccCcHHH-----HHHHHH-HhheeeEEEecCCC-Cc---------cccCCCCchHhHHHHHHHHHHHh
Confidence 46688999999998885 444444 44776654432111 00 12234456789999999998888
Q ss_pred HHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHH
Q 026352 180 SFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYT 214 (240)
Q Consensus 180 ~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~ 214 (240)
..+..++++-+++. ++..++....+++.+......
T Consensus 186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l 221 (327)
T KOG1581|consen 186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL 221 (327)
T ss_pred hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh
Confidence 99999998866531 478889999999988876663
No 63
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.83 E-value=0.023 Score=49.53 Aligned_cols=126 Identities=14% Similarity=0.182 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhh---hCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCC----C-CCCHHHHHHHHHHHHHHHHHH
Q 026352 4 LQICVASVYFLTEDSF---NQGLNPHIYVTYRHAAGSLMMF-PFAYFLERKIR----P-KLTLAVFLEIFLLSLLGVSLA 74 (240)
Q Consensus 4 ~~~~wg~~~i~~k~~~---~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~~~~g~~~~~~~ 74 (240)
..+..+.--+..|..+ ++.+|++.+..+---++...++ |+....+.... . ..+...+.. ...+.+. ...
T Consensus 171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sv~~-f~~ 248 (316)
T KOG1441|consen 171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-LLNSVLA-FLL 248 (316)
T ss_pred HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-HHHHHHH-HHH
Confidence 3445666677788777 3469999999999999999998 87766443222 1 222333333 3334444 467
Q ss_pred HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
+..-|..+.+++|-.-++....==+.+...++++++|+++..+ ..|..+++.|+.+=
T Consensus 249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLY 305 (316)
T ss_pred HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHH
Confidence 8888999999999887777766666667788888999999999 69999999999663
No 64
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.74 E-value=0.027 Score=41.05 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 68 LLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
+.+....+.+...++|+.|.+.+=.+ ...--+.+++.++++++|++++.+ ++|+.+.++|++.+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 33445688888899999998887654 457788889999999999999999 599999999998764
No 65
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.70 E-value=0.068 Score=40.90 Aligned_cols=104 Identities=16% Similarity=0.220 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccc-hhHHHH
Q 026352 24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNT-IPCMTF 102 (240)
Q Consensus 24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~-~P~~~~ 102 (240)
+|..-++.-+..+.+.+..+....+++..++.+..+|+ ...-|+++. ....+.....+..+++.+..+.-+ .-+...
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~-~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl 106 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGV-FFVLSNIILVPRLGAALTTILIVAGQLIASL 106 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 59999999999999998887776544332222222233 334688885 688888899999998888776543 444555
Q ss_pred HHHHH----HhhccccccCCCCccchhhHHHHHHHHH
Q 026352 103 IIAVV----FRLEIVDVRSPRGIAKILGTLASLVGVM 135 (240)
Q Consensus 103 ll~~~----~~~e~~~~~~~~~~~~~~g~~i~~~G~~ 135 (240)
++.++ .-++++++++ ++|+.+.++|+.
T Consensus 107 ~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 107 LIDHFGLFGAPKRPFSLRR------ILGLALMIAGVI 137 (138)
T ss_pred HHHHccccCCCCCCCCHHH------HHHHHHHHHHHh
Confidence 55553 2345556555 799999999985
No 66
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.64 E-value=0.017 Score=41.06 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhcccCcceee-eeccchhHHHHHHHHHHhhccccccCCCCccchhhHHH
Q 026352 70 GVSLALNLYFASMKYVHPTFMT-AVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLA 129 (240)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~~~a~-ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i 129 (240)
+....+.++..++|+.+.+.+= +...+..+.+++.+..+++|++++++ +.|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 4456788999999999999885 44568899999999999999999999 477653
No 67
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.92 E-value=0.19 Score=44.39 Aligned_cols=132 Identities=13% Similarity=0.215 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHHHhhhC---CCChHHHHHHHHHHHHHHHHHHHHHHhc--CC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQ---GLNPHIYVTYRHAAGSLMMFPFAYFLER--KI-RPKLTLAVFLEIFLLSLLGVSLAL 75 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~---~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~ 75 (240)
++.++++|..-++.|.=.++ ++|-..+-.+=-++..++++|...+..+ .+ .+-++..+.-.+++.++++..+.-
T Consensus 253 L~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSD 332 (416)
T KOG2765|consen 253 LLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSD 332 (416)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHH
Confidence 46788999999988875543 3565566666667777777765554222 11 112233445556777899999999
Q ss_pred HHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 76 NLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 76 ~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
.+|.+|.-.|++-.+++-++++-...++...++.+.+.++.. ++|.+-.++|-+.+..
T Consensus 333 ylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 333 YLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheec
Confidence 999999999999999988887777777888888888888877 6999999988877653
No 68
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.73 E-value=0.016 Score=50.32 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 66 LSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 66 ~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
.|++...+...+.+.++.+.|++..+-+..+.-++.++++..++|||++++. +.|..+++.|..+++..
T Consensus 55 ~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 55 IGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF 123 (300)
T ss_pred HHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe
Confidence 3554445678888999999999998888889999999999999999999999 59999999999877654
No 69
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.24 E-value=0.023 Score=49.06 Aligned_cols=70 Identities=20% Similarity=0.281 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352 65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY 140 (240)
Q Consensus 65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~ 140 (240)
+.|.+-..+....-|.+..+.|++..+-+-++.-+..++++..++|||+++.. .+|..++++|...++..
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe
Confidence 34666566788888999999999999999999999999999999999999998 69999999999887765
No 70
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.20 E-value=0.32 Score=40.54 Aligned_cols=71 Identities=23% Similarity=0.306 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 59 VFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 59 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
.|..+.+.++.+. +.+.+.|.-+.+-+|-.-+++..+--+++.+.++++++..++.+|| +|.++.+.|...
T Consensus 240 ~~~~l~l~ai~s~-LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQw------lgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASC-LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQW------LGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHH-hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHH------HHHHHHHHHhhh
Confidence 3556677777775 7999999999999999999999999999999999999999999995 999999988754
No 71
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=92.61 E-value=0.47 Score=36.20 Aligned_cols=54 Identities=19% Similarity=0.138 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhc------CCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352 167 GSILTVASCILWSSFYIMQAFTLKK------YPAKLSISAWMNCIGAAQSAVYTIIVQPK 220 (240)
Q Consensus 167 G~~l~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 220 (240)
|.++++.|.++.+++.++.|+..++ .-++..+..+....+.+.++|...+.|+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~ 60 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGP 60 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6788999999999999999986544 22688999999999999999998888764
No 72
>PRK13499 rhamnose-proton symporter; Provisional
Probab=92.33 E-value=5.7 Score=35.19 Aligned_cols=124 Identities=11% Similarity=0.065 Sum_probs=68.5
Q ss_pred HHHHHhhhCCCChHHHHHHHHH---HHHHHHH-HHHHHHh-c-CCC-----CCCC----HHHHHHHHHHHHHHHHHHHHH
Q 026352 13 FLTEDSFNQGLNPHIYVTYRHA---AGSLMMF-PFAYFLE-R-KIR-----PKLT----LAVFLEIFLLSLLGVSLALNL 77 (240)
Q Consensus 13 i~~k~~~~~~~~p~~~~~~R~~---~a~l~l~-~~~~~~~-~-~~~-----~~~~----~~~~~~~~~~g~~~~~~~~~~ 77 (240)
...+.+.+.+.||.....-.+. +++++.- .++..+. | ++. ++.+ .++.....+.|++= ...+.+
T Consensus 198 ~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W-~~~~~~ 276 (345)
T PRK13499 198 PMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMW-YLQFFF 276 (345)
T ss_pred chhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHH-HHHHHH
Confidence 3444433456777766655554 5544433 3333221 1 211 1112 23333345555554 367778
Q ss_pred HHHhhcccCcceeee---ec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 78 YFASMKYVHPTFMTA---VV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 78 ~~~~l~~~~~~~a~i---i~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
|..+-+..+.+.+.+ +. .+.-++..+-+. ++||+=+..+..-+.-++|+++-++|.+++.
T Consensus 277 y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 277 YAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred HHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 888888776655555 54 555566666666 5899877322222444678888888887654
No 73
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=91.88 E-value=0.12 Score=37.59 Aligned_cols=42 Identities=24% Similarity=0.417 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 176 ILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 176 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
++|+.+.+..|+..++. +|...+.+++..+++ .++.....++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 42 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGR 42 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcc
Confidence 47999999999999888 589999999999998 6666666544
No 74
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=91.42 E-value=0.046 Score=45.61 Aligned_cols=162 Identities=15% Similarity=0.180 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026352 3 LLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASM 82 (240)
Q Consensus 3 ~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l 82 (240)
+=++.||+...+..+ -+=+|.+-..---+-|.++-+...++ . .|.++.+.+..-++.|.+= ...+...+-++
T Consensus 9 ~P~l~WGsip~v~~k---~GG~p~qQ~lGtT~GALifaiiv~~~--~--~p~~T~~~~iv~~isG~~W-s~GQ~~Qfka~ 80 (288)
T COG4975 9 LPALGWGSIPLVANK---FGGKPYQQTLGTTLGALIFAIIVFLF--V--SPELTLTIFIVGFISGAFW-SFGQANQFKAI 80 (288)
T ss_pred HHHHHhcccceeeee---cCCChhHhhhhccHHHHHHHHHHhee--e--cCccchhhHHHHHHhhhHh-hhhhhhhhhhe
Confidence 446789998886543 23455554433333333333332222 2 3456666666666666654 47889999999
Q ss_pred cccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhH---HHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352 83 KYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGT---LASLVGVMVIAFYKGPAVPSLKGAPIHLGTN 158 (240)
Q Consensus 83 ~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~---~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
++.+++++.=+. .+.-+-+.+++++.++|--+..+. ++|. ++.++|+.+-. .+++.+. ++
T Consensus 81 ~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~-----IlG~iAliliviG~~lTs-~~~~~nk----------~~ 144 (288)
T COG4975 81 QLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI-----ILGFIALILIVIGIYLTS-KQDRNNK----------EE 144 (288)
T ss_pred eeeeeeccccccchhhHhhceeeeEEEEeccCcchhH-----HHHHHHHHHHHHhheEee-eeccccc----------cc
Confidence 999999998775 467778889999999998776553 3332 22333332211 1111110 01
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 026352 159 SVHENWLKGSILTVASCILWSSFYIMQAFT 188 (240)
Q Consensus 159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~ 188 (240)
+...+.-+|....+.+.+.|-.|.+..+..
T Consensus 145 ~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f 174 (288)
T COG4975 145 ENPSNLKKGIVILLISTLGYVGYVVLFQLF 174 (288)
T ss_pred cChHhhhhheeeeeeeccceeeeEeeeccc
Confidence 112233456666667777777777766654
No 75
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=91.31 E-value=0.21 Score=40.99 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=50.7
Q ss_pred HHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHH
Q 026352 72 SLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGV 134 (240)
Q Consensus 72 ~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~ 134 (240)
+..+.+..+-++|.++..-+....+.++.+.+++.++++|+++..++ .|..+.+.|+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~------~g~~lV~~~~ 219 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFY------LGAILVFLAT 219 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHH------HHHHHHHeee
Confidence 45777888999999999999999999999999999999999999994 8888877765
No 76
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.12 E-value=2.4 Score=35.21 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=86.4
Q ss_pred HhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCc
Q 026352 80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNS 159 (240)
Q Consensus 80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (240)
-+++|.+...-+++-.++-+.++.....+++.|++-.+ ....++.+...+.-. . ++.+.. ..
T Consensus 87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~-w-~D~q~~----------~~ 148 (309)
T COG5070 87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVAT-W-GDQQAS----------AF 148 (309)
T ss_pred cceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhc-c-chhhHH----------HH
Confidence 58899998888888889999999999999999998777 466555555443321 1 221100 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhhhh--cCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 160 VHENWLKGSILTVASCILWSSFYIMQAFTLK--KYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 160 ~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
.......|.++....++.-+.|-...||..| +. ....-+++..+.+.-++.....++|+
T Consensus 149 ~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~ed 209 (309)
T COG5070 149 KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFED 209 (309)
T ss_pred HhcccCCceEEEehhhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhcc
Confidence 0112356899999999999999999988654 22 24567788889998888888888876
No 77
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=89.41 E-value=0.68 Score=39.49 Aligned_cols=179 Identities=15% Similarity=0.105 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcce-eeeeccchhHHHHHH
Q 026352 26 HIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTF-MTAVVNTIPCMTFII 104 (240)
Q Consensus 26 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-a~ii~~~~P~~~~ll 104 (240)
..+++.+|++-+.--++..- +....+++.+.|++.....+ + +..+.+-.+++++-=+-. =-++-+-.++..+.+
T Consensus 34 NLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~m--F--F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVAM--F--FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehhe--e--eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 35566666655443333221 11112356666665443322 2 345666678888764443 344556789999999
Q ss_pred HHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC-ccccchhHHHHHHHHHHHHHHHHHH
Q 026352 105 AVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN-SVHENWLKGSILTVASCILWSSFYI 183 (240)
Q Consensus 105 ~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~l~l~a~~~~a~~~v 183 (240)
+|++.++|-+.+| ....++.-+|+++.+..+.++... .-+...++++ .....+..|..+...|-+.=|...+
T Consensus 109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgi 181 (330)
T KOG1583|consen 109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGI 181 (330)
T ss_pred HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 588988899998876553322211 0000111111 1223457899998899998898899
Q ss_pred HHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352 184 MQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQPK 220 (240)
Q Consensus 184 ~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 220 (240)
.++..-+++. ++-...++.= .+++|.-++.++|
T Consensus 182 yqE~~Y~kyGKh~~EalFytH----~LsLP~Flf~~~d 215 (330)
T KOG1583|consen 182 YQETTYQKYGKHWKEALFYTH----FLSLPLFLFMGDD 215 (330)
T ss_pred HHHHHHHHhcCChHHHHHHHH----HhccchHHHhcch
Confidence 9888777653 2344444443 3555655555554
No 78
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.32 E-value=2 Score=33.32 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=59.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHH
Q 026352 24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTF 102 (240)
Q Consensus 24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ 102 (240)
+|+.-.+..+.++.+++..+.+.++++.......+.-++...-|++|. .+-..-.......+++....+ ..-.-++..
T Consensus 33 spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl 111 (150)
T COG3238 33 SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-IFVTSSILLAPRLGAATTIALVIAGQLIMGL 111 (150)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-hhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence 599999999999999998888774333222211221223334466664 344444445555554444333 233334444
Q ss_pred HHHHH-HhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 103 IIAVV-FRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 103 ll~~~-~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
++..+ ++++. ++.++..|++|+++.++|+.+
T Consensus 112 liD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 112 LIDHFGWFGVP---KRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred HHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHH
Confidence 44432 22221 122455668999999999433
No 79
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.60 E-value=7 Score=33.98 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=81.7
Q ss_pred HHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHHhcC-----CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026352 10 SVYFLTEDSFNQ-GLNPHIYVTYRHAAGSLMMFPFAYFLERK-----IRP-KLTLAVFLEIFLLSLLGVSLALNLYFASM 82 (240)
Q Consensus 10 ~~~i~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~l 82 (240)
...+..|...+. +.+-+.+.++-.+.+.+.+.....+.+.. ..+ ......+....+.++++. .-..+-++..
T Consensus 171 ~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf-~isy~s~~ct 249 (314)
T KOG1444|consen 171 AFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGF-GISYTSFLCT 249 (314)
T ss_pred HHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 334455555543 56677788888888887776655443210 011 112233455666677765 5777788889
Q ss_pred cccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 83 KYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 83 ~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
+++++...++.....=..+.+...++.+++.++.. ++|+.+++.|.++=
T Consensus 250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n------~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLN------VIGLLVGFFGGVLY 298 (314)
T ss_pred hhccccceeehhhhhhHHHHHHHHhcCCceechhh------hHHHHHHhhhhhHH
Confidence 99999988888866666666666677889999888 69999999998654
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=86.56 E-value=0.97 Score=37.94 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352 56 TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM 135 (240)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~ 135 (240)
++..|+. .+-|++= ...+.+++.+-+..+.+.+=.+..+.-+..++-+.++++||=+++++ ...+.|+++.++|.+
T Consensus 206 ~K~t~~n-ii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm--~~v~iGiilivvgai 281 (288)
T COG4975 206 NKYTWLN-IIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEM--VYVIIGIILIVVGAI 281 (288)
T ss_pred HHHHHHH-HhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhh--hhhhhhHHHHHHHhh
Confidence 3344444 4456554 36888888888888877777778888888899999999999999885 333456666666665
Q ss_pred HH
Q 026352 136 VI 137 (240)
Q Consensus 136 ~~ 137 (240)
++
T Consensus 282 ~l 283 (288)
T COG4975 282 LL 283 (288)
T ss_pred hh
Confidence 54
No 81
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=85.87 E-value=3.6 Score=29.87 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=66.1
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA 80 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (240)
|+.+.++||.+..+.|.+... .+..-=.. |-. + ...++.|.. -++++.+..+ .++. ....+||+
T Consensus 8 lvaVgllWG~Tnplirrgs~g-~~~v~~~~-~k~-----~---~~lqe~~tl-~l~w~Y~iPF----llNq-cgSaly~~ 71 (125)
T KOG4831|consen 8 LVAVGLLWGATNPLIRRGSLG-WDKVKSSS-RKI-----M---IALQEMKTL-FLNWEYLIPF----LLNQ-CGSALYYL 71 (125)
T ss_pred HHHHHHHHccccHHHHHHHhh-HhhccCch-HHH-----H---HHHHHHHHH-HHhHHHHHHH----HHHH-hhHHHHHH
Confidence 467888999999988876532 33221110 000 0 001121110 1223333221 2333 57778899
Q ss_pred hhcccCcceeeeecc-chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 81 SMKYVHPTFMTAVVN-TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 81 ~l~~~~~~~a~ii~~-~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
-+++++-+.+.-+.+ +.-.++++.+..+ +|+...++. ++|..+.+.|+.+.
T Consensus 72 tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a-----~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 72 TLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLA-----LLGTSLIVFGIWLC 123 (125)
T ss_pred HHhcCCceeeeeecchhHHHHHHHHHHHh-cccccccee-----ehhhhHHhhhhhhe
Confidence 999999998887754 4556666666654 566554443 79998888888654
No 82
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=85.60 E-value=12 Score=31.78 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=96.1
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
+++.+++|++++-.|.- +. -|++.+.++-...-.+.-+..... +. .|+. .....+-|.+= +..+.+-.-.
T Consensus 6 ~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~--~~-~p~f----~p~amlgG~lW-~~gN~~~vpi 75 (254)
T PF07857_consen 6 IVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLI--LG-FPPF----YPWAMLGGALW-ATGNILVVPI 75 (254)
T ss_pred HHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHh--cC-CCcc----eeHHHhhhhhh-hcCceeehhH
Confidence 56789999999999963 44 688777766544444433333333 21 2222 12223333443 3466666677
Q ss_pred hcccCcceeeeeccchhHHH-HHHHHH-HhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCC---C-----CC
Q 026352 82 MKYVHPTFMTAVVNTIPCMT-FIIAVV-FRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSL---K-----GA 151 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~-~ll~~~-~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~---~-----~~ 151 (240)
++..+-+.+-.+-.+.-+.+ -..+.+ +++++.+... ......+|+.++++|..+..+-+.+..... . .+
T Consensus 76 i~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~ 154 (254)
T PF07857_consen 76 IKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIE 154 (254)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccc
Confidence 77777766665554433222 222221 2333322211 123446888888888876654332221100 0 00
Q ss_pred Cc---cc-----CCCc------cccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 026352 152 PI---HL-----GTNS------VHENWLKGSILTVASCILWSSFYIMQAFTLKKY 192 (240)
Q Consensus 152 ~~---~~-----~~~~------~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~ 192 (240)
+. .. .+++ ...+...|..+++.+++.|+...+=.....++.
T Consensus 155 ~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 155 DVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 00 00 0000 111357899999999999999988877765553
No 83
>COG2510 Predicted membrane protein [Function unknown]
Probab=82.83 E-value=6.9 Score=29.58 Aligned_cols=51 Identities=8% Similarity=-0.042 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 168 SILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
.++++++++.|++..++.|-..++. ||..-+....+...+.+.......++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~ 55 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN 55 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5789999999999999999888887 57888888888888888887777754
No 84
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=81.26 E-value=4.5 Score=35.05 Aligned_cols=110 Identities=12% Similarity=0.146 Sum_probs=81.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeecc
Q 026352 21 QGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPK-----LTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVN 95 (240)
Q Consensus 21 ~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~ 95 (240)
..+++..+.++-.+...+.-........ ..++. ..++-++.+++.+.++. +.|.+.|+-++.-++-.-++++.
T Consensus 198 ~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~s~~ga-vGQ~FI~~TI~~FGslt~t~I~t 275 (327)
T KOG1581|consen 198 YKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLYSTCGA-VGQLFIFYTIERFGSLTFTTIMT 275 (327)
T ss_pred CCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHHHHhhh-hhhheehhhHhhcccHHHHHHHH
Confidence 3588888888888888777655432221 11221 23445666788888885 68888888888777777777888
Q ss_pred chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 96 TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 96 ~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
+==++...++.+.++.++++.|| .|+.+.+.|+.+=+
T Consensus 276 tRk~~si~lS~i~f~h~~s~~q~------~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 276 TRKMVSIMLSCIVFGHPLSSEQW------LGVLIVFGGIFLEI 312 (327)
T ss_pred HHHHHHHHHHHHHhCCccchhhc------cCeeeehHHHHHHH
Confidence 88888999999999999999996 99999998886543
No 85
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=76.89 E-value=16 Score=28.76 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCchhHHHHHHHHHHHHHHHHHHHhcc
Q 026352 163 NWLKGSILTVASCILWSSFYIMQAFTLKK-----YPAKLSISAWMNCIGAAQSAVYTIIVQ 218 (240)
Q Consensus 163 ~~~~G~~l~l~a~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~ 218 (240)
+.......++.+++.+++-.++....++| .|.|..=..+.++.++++++.+.-+.+
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFmgF~G 189 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFMGFSG 189 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHcCccc
Confidence 45667788888999999888877655443 466777777888888888877766543
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=74.45 E-value=13 Score=28.31 Aligned_cols=52 Identities=13% Similarity=-0.011 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 168 SILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
.++.+.++.+-++...++.++.++..+|..-+.+.+..|.+.+.....+.++
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~ 54 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGR 54 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4678899999999999999998887459999999999999999888777755
No 87
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=73.51 E-value=27 Score=29.20 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=77.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchh
Q 026352 23 LNPHIYVTYRHAAGSLMMFPFAYFLERKIRP----KLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIP 98 (240)
Q Consensus 23 ~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P 98 (240)
..-.+-.+|..+++..+++.+....+.+... .++-......++.|+... ....+--|.++-++++.-+.+-.+.-
T Consensus 183 f~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv-giSy~saWcvrVtSSTtySMvGALNK 261 (309)
T COG5070 183 FKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV-GISYCSAWCVRVTSSTTYSMVGALNK 261 (309)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh-hhhhccceeEeehhhhHHHHHHHhhh
Confidence 5667888999999999988877665432211 233333344555565543 56667778888888888888888887
Q ss_pred HHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 99 CMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 99 ~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
.-.++-|.++++|+.+..+ +..+++++....+
T Consensus 262 lp~alaGlvffdap~nf~s------i~sillGflsg~i 293 (309)
T COG5070 262 LPIALAGLVFFDAPVNFLS------IFSILLGFLSGAI 293 (309)
T ss_pred ChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHH
Confidence 7888889999999999888 6899888875444
No 88
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=73.33 E-value=27 Score=29.22 Aligned_cols=116 Identities=6% Similarity=-0.083 Sum_probs=67.6
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHH-HHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAY-FLERKIRP-KLTLAVFLEIFLLSLLGVSLALNLYF 79 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~-~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (240)
++++++=|...+..+..++++-.|+-.--.+..+-+++...+.. ..++++.. +--++.+-...+.-++..+..-...-
T Consensus 120 l~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva 199 (244)
T PF04142_consen 120 LAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVA 199 (244)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHH
Confidence 45677888999999888877445555555554444444333332 22221111 11111111112222222334445555
Q ss_pred HhhcccCcceeeeeccchhHHHHHHHHHHhhccccccC
Q 026352 80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRS 117 (240)
Q Consensus 80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~ 117 (240)
.-+||.+.-.=+.-....-+.+.++++.+++.+++...
T Consensus 200 ~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f 237 (244)
T PF04142_consen 200 FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF 237 (244)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 67888887766667778888899999999999988766
No 89
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=71.87 E-value=69 Score=28.06 Aligned_cols=127 Identities=17% Similarity=0.123 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHHhhhCC----CChHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------CCCCHHHHHHHHHHH
Q 026352 3 LLQICVASVYFLTEDSFNQG----LNPHIYVTYRHAAGSLMMFPFAYFLERKIR-----------PKLTLAVFLEIFLLS 67 (240)
Q Consensus 3 ~~~~~wg~~~i~~k~~~~~~----~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g 67 (240)
.+.++=|.-+..+++.+++. =+|+.....-.-.=.+.++|..+..|+... +..-.+....+.+.|
T Consensus 171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g 250 (349)
T KOG1443|consen 171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG 250 (349)
T ss_pred HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence 34556666777777777541 135544433333334444555544443221 111122333344444
Q ss_pred HHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 68 LLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
++. ++--.+-+.=+..|+.-..++.----=+-+.+++....+++++..+| .|..++..|+.+
T Consensus 251 ~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~------~Gl~i~~agi~~ 312 (349)
T KOG1443|consen 251 LLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNW------LGLAICLAGILL 312 (349)
T ss_pred HHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHH------HHHHHHHHHHHH
Confidence 443 23333444445556555555544455566778899999999999885 999999999965
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.66 E-value=57 Score=25.31 Aligned_cols=55 Identities=11% Similarity=-0.005 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352 165 LKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP 219 (240)
Q Consensus 165 ~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (240)
....+..++++.+-....-++.++.+...+|..-+.+.+..|.+.+.....+.++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~ 58 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG 58 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3456788899999999999999988877668989999999999998888777433
No 91
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=53.25 E-value=65 Score=27.58 Aligned_cols=128 Identities=15% Similarity=0.043 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352 2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS 81 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (240)
++.+-++|.+.+.=++..++ .|-.++...--++++++-.+= .+.+|+....+.|..-....+...+..++.+.+.-.=
T Consensus 172 i~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MFllYsl~pil 249 (336)
T KOG2766|consen 172 IAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMFLLYSLAPIL 249 (336)
T ss_pred EecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHHHHHHhhHHh
Confidence 44566778888877777766 888888877777777776553 3345544444443322222222223333344444445
Q ss_pred hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
++..+++...+-.-++-.+..++ . .++-+++|.- .++......|.++-..
T Consensus 250 ~k~~~aT~~nlslLTsDmwsl~i-~-~FgYhv~wLY------~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 250 IKTNSATMFNLSLLTSDMWSLLI-R-TFGYHVDWLY------FLAFATIATGLIIYST 299 (336)
T ss_pred eecCCceEEEhhHhHHHHHHHHH-H-HHhcchhhhh------HHHHHHHHHhhEEeec
Confidence 66666665554444555565555 3 3444577766 4777777778755433
No 92
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=51.55 E-value=11 Score=32.29 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=70.5
Q ss_pred chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHH
Q 026352 96 TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASC 175 (240)
Q Consensus 96 ~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 175 (240)
+.|++ +.+.++-+.|-.+.. ..+..+..+|.++.+..+.. . +.+.+ ..|....-+|-
T Consensus 143 liPVm--iggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~-~-------------sPNF~-~~Gv~mIsgAL 199 (367)
T KOG1582|consen 143 LIPVM--IGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQ-T-------------SPNFN-LIGVMMISGAL 199 (367)
T ss_pred hhhhh--heeeeeccccccHHH------HHHHHHHHHHHHhhhhcccc-c-------------CCCcc-eeeHHHHHHHH
Confidence 44544 345566566655555 68888888899988765321 1 12333 57888888888
Q ss_pred HHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccCCccccc
Q 026352 176 ILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQPKAAAWS 225 (240)
Q Consensus 176 ~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 225 (240)
++=|.-.-.++|..+..| +...+.++++..|....+.....+++-.+.|.
T Consensus 200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~ 250 (367)
T KOG1582|consen 200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWT 250 (367)
T ss_pred HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhH
Confidence 888887778887665543 35678888888888877776666665444443
No 93
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=46.00 E-value=33 Score=29.91 Aligned_cols=127 Identities=13% Similarity=0.103 Sum_probs=69.0
Q ss_pred ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHH----hc--CCCC-------CCCHHHHHHHHHHH
Q 026352 1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFL----ER--KIRP-------KLTLAVFLEIFLLS 67 (240)
Q Consensus 1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~----~~--~~~~-------~~~~~~~~~~~~~g 67 (240)
|+++.+|||+....-|.+.+.+--| +..-+-+.++-++...+..+. .+ ...| +.++..+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 7889999999999999887653333 223334444444333322221 11 1111 12445555555566
Q ss_pred HHHHHHHHHHHHHhhcccCcceeeeeccchh-HHHHHHHHHHhhccccccCCCCccchhhHHHHHHHH
Q 026352 68 LLGVSLALNLYFASMKYVHPTFMTAVVNTIP-CMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGV 134 (240)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P-~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~ 134 (240)
++-. +.+++..+++.+.+.+.+-.+..... ++-+.+-+ +++.|.+...+ -+.|+.+.++.+
T Consensus 80 vvfn-lgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~i----LF~GV~cf~iAI 141 (336)
T PF07168_consen 80 VVFN-LGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEI----LFPGVACFLIAI 141 (336)
T ss_pred Hhhh-hHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceE----EEccHHHHHHHH
Confidence 6654 68888889999988877766653322 22222222 34566654331 023554444444
No 94
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=41.95 E-value=89 Score=27.69 Aligned_cols=119 Identities=18% Similarity=0.279 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhcccc--ccCCCCccchhhHHHHHHH
Q 026352 57 LAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVD--VRSPRGIAKILGTLASLVG 133 (240)
Q Consensus 57 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~--~~~~~~~~~~~g~~i~~~G 133 (240)
.+.+...++.|++=. .....|-.+++|.+.+...-+ ..+.-++-.++--++.++ .+ ..+.-+|..++|++++++|
T Consensus 70 ~~~l~~~~l~G~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~-~~~l~~~~~g~~vL~Gv~v~LiG 147 (344)
T PF06379_consen 70 ASTLFWTFLFGVLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGT-FDELLATPSGQIVLLGVAVCLIG 147 (344)
T ss_pred hhHHHHHHHHHHHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCc-ccccccCCCchhhhhHHHHHHHH
Confidence 345555565666543 577778888999887765433 344444444443333322 11 1111256668999999999
Q ss_pred HHHHHHhcCC--CCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHh
Q 026352 134 VMVIAFYKGP--AVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQA 186 (240)
Q Consensus 134 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k 186 (240)
+.+.... |. +.+.. ++..+.+.-+|.++++.|.+.=|++++-..
T Consensus 148 Iai~g~A-G~~Ke~~~~--------~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 148 IAICGKA-GSMKEKELG--------EEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HHHHhHH-HHhhhhhhc--------cchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9887432 21 10000 112234556899999999988888877654
No 95
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=41.48 E-value=47 Score=28.64 Aligned_cols=109 Identities=15% Similarity=0.202 Sum_probs=71.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccc
Q 026352 22 GLNPHIYVTYRHAAGSLMMFPFAYFLER--KIRP---KLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNT 96 (240)
Q Consensus 22 ~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~ 96 (240)
+-+..++.++.+.++.+.++..+..... +.+. +-+.|.....++.+..+. +.......=++.-++..+..+...
T Consensus 217 ~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTa 295 (367)
T KOG1582|consen 217 PASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTA 295 (367)
T ss_pred CCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHh
Confidence 4566788888889988877766554321 0010 113344444555555543 444444445566677778888888
Q ss_pred hhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352 97 IPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI 137 (240)
Q Consensus 97 ~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~ 137 (240)
---.+.+++++++.++.+.+.. -+.++.+.|+.+=
T Consensus 296 RKavTi~lSfllFsKPfT~qy~------~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 296 RKAVTILLSFLLFSKPFTEQYV------WSGLLVVLGIYLN 330 (367)
T ss_pred HhHHHHHHHHHHHcCchHHHHh------hhhHHHHHHHHhh
Confidence 8888999999999999999884 6666777788653
No 96
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=40.81 E-value=1.1e+02 Score=26.58 Aligned_cols=129 Identities=19% Similarity=0.347 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHH----HHHHHHHHhcCC---CCCCCHHHHHHH---------H
Q 026352 2 ILLQICVASVYFLTEDSF-NQGLNPHIYVTYRHAAGSLM----MFPFAYFLERKI---RPKLTLAVFLEI---------F 64 (240)
Q Consensus 2 ~~~~~~wg~~~i~~k~~~-~~~~~p~~~~~~R~~~a~l~----l~~~~~~~~~~~---~~~~~~~~~~~~---------~ 64 (240)
++++++-|.-.+.=++-+ +++++|.+.+.+.-+++.++ +.|+.++...+. .++-.+.||... +
T Consensus 182 iiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l 261 (372)
T KOG3912|consen 182 IIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSL 261 (372)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchh
Confidence 456666666666554433 45799999999998877443 333333321111 122233344321 1
Q ss_pred HHHHHHHHHHHH-HHHHhh---cccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352 65 LLSLLGVSLALN-LYFASM---KYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV 136 (240)
Q Consensus 65 ~~g~~~~~~~~~-~~~~~l---~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~ 136 (240)
.+...+....-. +-+.|+ ++.++++=.++=.+--..+-+++..+..|+....| +.|.++-..|+++
T Consensus 262 ~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llq------ilGFliLi~Gi~l 331 (372)
T KOG3912|consen 262 AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQ------ILGFLILIMGIIL 331 (372)
T ss_pred HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 112222111111 122343 34455555555555555556667777889999999 7999999999965
No 97
>PRK02237 hypothetical protein; Provisional
Probab=39.99 E-value=38 Score=24.72 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352 97 IPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA 138 (240)
Q Consensus 97 ~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~ 138 (240)
.-+...+..|.+-++|++... ++|..++++|+.++.
T Consensus 69 yI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 69 YVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIM 104 (109)
T ss_pred HHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhe
Confidence 334444556667777777666 699999999997764
No 98
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.29 E-value=31 Score=25.09 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=27.4
Q ss_pred chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 96 TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 96 ~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
..-+...+-+|.+-++|++... ++|..++++|+.++.+
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 3444555666677777777666 6999999999977653
No 99
>PF09945 DUF2177: Predicted membrane protein (DUF2177); InterPro: IPR018687 This family of putative membrane proteins has no known function.
Probab=36.93 E-value=1.8e+02 Score=21.87 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Q 026352 172 VASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYT 214 (240)
Q Consensus 172 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 214 (240)
+++.++|+.|-..+....|+- |..++..=...|+++....+
T Consensus 82 llGl~~YgtYdlTN~Atlk~W--~~~~~liD~~WG~~lt~~sa 122 (128)
T PF09945_consen 82 LLGLFAYGTYDLTNLATLKDW--PLKVTLIDIAWGTFLTALSA 122 (128)
T ss_pred HHHHHHHHHHHHHhHHHHCCC--CccHHHHHHhHHHHHHHHHH
Confidence 567889999999999888887 35677777777777665544
No 100
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=36.81 E-value=2.2e+02 Score=22.88 Aligned_cols=89 Identities=13% Similarity=-0.001 Sum_probs=51.3
Q ss_pred eccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCC------------CCCC-CCCCcccCCCc
Q 026352 93 VVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPA------------VPSL-KGAPIHLGTNS 159 (240)
Q Consensus 93 i~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~------------~~~~-~~~~~~~~~~~ 159 (240)
.-+..|+++++.++...+||.+..+ +++..+...|++.-...+.+. .+.. +.++ ..
T Consensus 10 ~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~-----~~ 78 (222)
T TIGR00803 10 FKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK-----TL 78 (222)
T ss_pred HHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc-----cc
Confidence 3456777788888877777776444 677777777775422111000 0000 0000 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 026352 160 VHENWLKGSILTVASCILWSSFYIMQAFTLKKY 192 (240)
Q Consensus 160 ~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~ 192 (240)
...+...|....+.+..+=+.-.+.+++..++.
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 112345677777788888788888888876554
No 101
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=35.46 E-value=1.5e+02 Score=20.55 Aligned_cols=57 Identities=21% Similarity=0.329 Sum_probs=37.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 026352 22 GLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVH 86 (240)
Q Consensus 22 ~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 86 (240)
+.+|..+...-..++++.+... |..+|+..|++-......|++ ..-.+++.|-+..+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~l-----r~~~Pev~Rd~D~~fs~vgLl---~g~IL~~~gwRldp 60 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFL-----RFFRPEVSRDYDIFFSSVGLL---YGLILWFQGWRLDP 60 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH-----HHHCcchhhhhhHHHHHHHHH---HHHHHHHHhhcccH
Confidence 5788888888888888776643 333456666654444444443 46677888887766
No 102
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=34.94 E-value=1.5e+02 Score=25.70 Aligned_cols=130 Identities=16% Similarity=0.201 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHHhc-CC---CCCC-CHHHHHHHHHHHHHHHHHHHH
Q 026352 3 LLQICVASVYFLTEDSFNQ-GLNPHIYVTYRHAAGSLMMFPFAYFLER-KI---RPKL-TLAVFLEIFLLSLLGVSLALN 76 (240)
Q Consensus 3 ~~~~~wg~~~i~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~---~~~~-~~~~~~~~~~~g~~~~~~~~~ 76 (240)
.+.+.-+.+.+-+|..+.. +=.-..+.++-...+.++.+|...+.+. +. .+.. ..+-|....+.|++|.+.++
T Consensus 192 laSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy- 270 (347)
T KOG1442|consen 192 LASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY- 270 (347)
T ss_pred HHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh-
Confidence 4455666777777754432 1123578888889999999998765321 11 1222 45556666667777754333
Q ss_pred HHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352 77 LYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139 (240)
Q Consensus 77 ~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~ 139 (240)
--.+-+|.|+|-.=-+-...-...=.+++..+++|..+...| -+-++.+.|...-+.
T Consensus 271 vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lww------tsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 271 VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWW------TSNIVVLVGSLAYTL 327 (347)
T ss_pred eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhee------eeeEEEEehhHHHHH
Confidence 223456667665544444445556678889999999888775 777777777765443
No 103
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=34.32 E-value=2.1e+02 Score=21.84 Aligned_cols=28 Identities=4% Similarity=0.301 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352 164 WLKGSILTVASCILWSSFYIMQAFTLKK 191 (240)
Q Consensus 164 ~~~G~~l~l~a~~~~a~~~v~~k~~~~~ 191 (240)
.....+..++++..|.-|...+||.++.
T Consensus 119 ~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 119 AIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 3567788899999999999999987653
No 104
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=30.15 E-value=1.6e+02 Score=21.47 Aligned_cols=17 Identities=12% Similarity=-0.074 Sum_probs=14.1
Q ss_pred HHHHHHHHhhccccccC
Q 026352 101 TFIIAVVFRLEIVDVRS 117 (240)
Q Consensus 101 ~~ll~~~~~~e~~~~~~ 117 (240)
.+.++.+++||++++..
T Consensus 76 F~~Fsv~~l~E~l~~n~ 92 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNY 92 (108)
T ss_pred eHHHHHHHhCCCccHHH
Confidence 34667888999999998
No 105
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=27.60 E-value=1.3e+02 Score=17.38 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 026352 168 SILTVASCILWSSFYIMQAF 187 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~ 187 (240)
.++-++.+.+|++|++....
T Consensus 8 Vl~Pil~A~~Wa~fNIg~~A 27 (36)
T CHL00196 8 IAAPVLAAASWALFNIGRLA 27 (36)
T ss_pred HHHHHHHHHHHHHHHhHHHH
Confidence 45667899999999987543
No 106
>PF06298 PsbY: Photosystem II protein Y (PsbY); InterPro: IPR009388 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbY found in PSII. In higher plants, two related PsbY proteins exist, PsbY-1 and PsbY-2, which appear to function as a heterodimer. In spinach and Arabidopsis, these two proteins arise from a single-copy nuclear gene that is processed in the chloroplast. By contrast, prokaryotic and organellar chromosomes encode a single PsbY protein, as found in cyanobacteria and red algae, indicating a duplication event in the evolution of higher plants []. PsbY has two low manganese-dependent activities: a catalase-like activity and an L-arginine metabolising activity that converts L-arginine into ornithine and urea []. In addition, a redox-active group is thought to be present in the protein. In cyanobacteria, PsbY deletion mutants have a slightly impaired PSII that is less capable of coping with low levels of calcium ions than the wild-type.; GO: 0030145 manganese ion binding, 0015979 photosynthesis, 0009523 photosystem II, 0016021 integral to membrane
Probab=23.32 E-value=1.6e+02 Score=16.93 Aligned_cols=21 Identities=24% Similarity=0.368 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 026352 168 SILTVASCILWSSFYIMQAFT 188 (240)
Q Consensus 168 ~~l~l~a~~~~a~~~v~~k~~ 188 (240)
.+.-++.+.+|++|++..-..
T Consensus 8 Vl~Pil~A~gWa~fNIg~~Al 28 (36)
T PF06298_consen 8 VLLPILPAAGWALFNIGRAAL 28 (36)
T ss_pred HHHHHHHHHHHHHHHhHHHHH
Confidence 455678899999999986443
No 107
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=23.27 E-value=1.1e+02 Score=26.52 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=25.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352 163 NWLKGSILTVASCILWSSFYIMQAFTLKK 191 (240)
Q Consensus 163 ~~~~G~~l~l~a~~~~a~~~v~~k~~~~~ 191 (240)
++..|..+++.++++.+....++||-..|
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r 32 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR 32 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999986443
No 108
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=23.20 E-value=1.5e+02 Score=17.41 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 026352 53 PKLTLAVFLEIFLLSLLGVSLALNLY 78 (240)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (240)
|.+.||++..++..|.........++
T Consensus 4 Pdm~RR~lmN~ll~Gava~~a~~~ly 29 (39)
T PF08802_consen 4 PDMSRRQLMNLLLGGAVAVPAGGMLY 29 (39)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHhhHHHHHHHHhh
Confidence 45667888888887777654444333
No 109
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=22.94 E-value=2.1e+02 Score=18.02 Aligned_cols=43 Identities=14% Similarity=0.332 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 026352 124 ILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLK 190 (240)
Q Consensus 124 ~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~ 190 (240)
++|.++.++|++++... | .|.+..+++-...|.+..-.|+..+
T Consensus 6 v~G~~lv~~Gii~~~lP-G-----------------------pG~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPLP-G-----------------------PGLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hHHHHHHHHHHHhhcCC-C-----------------------CcHHHHHHHHHHHHHhhHHHHHHHH
Confidence 58888888999776532 2 1556666677777777777776654
No 110
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=20.29 E-value=2.8e+02 Score=18.92 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHH
Q 026352 4 LQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFP 42 (240)
Q Consensus 4 ~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~ 42 (240)
..+.|...+.+-+..-.+ ++++.+.+.-+.+.+++++-
T Consensus 29 s~~~w~iWw~~f~d~P~s-ieSIALl~~~~AfsgLL~lH 66 (77)
T PF12292_consen 29 SVLSWPIWWFFFRDTPTS-IESIALLFFCFAFSGLLFLH 66 (77)
T ss_pred HHHHHHHHHHHHcCCcch-HHHHHHHHHHHHHHHHHHHH
Confidence 445555555555533222 55555555555555554443
Done!