Query 026353
Match_columns 240
No_of_seqs 197 out of 1539
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 06:56:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026353.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026353hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1.9E-48 4.1E-53 356.9 19.5 221 1-233 231-453 (454)
2 PLN02213 sinapoylglucose-malat 100.0 7.7E-41 1.7E-45 298.1 21.1 203 1-230 114-319 (319)
3 PLN03016 sinapoylglucose-malat 100.0 3.5E-40 7.5E-45 303.8 20.9 203 1-230 228-433 (433)
4 PTZ00472 serine carboxypeptida 100.0 3.4E-40 7.4E-45 306.6 17.3 196 1-230 241-461 (462)
5 PLN02209 serine carboxypeptida 100.0 3.8E-39 8.3E-44 297.0 20.7 205 1-230 230-437 (437)
6 PF00450 Peptidase_S10: Serine 100.0 4.7E-39 1E-43 294.0 14.5 206 1-227 199-415 (415)
7 KOG1283 Serine carboxypeptidas 99.9 2.1E-24 4.6E-29 186.8 5.8 138 84-226 272-412 (414)
8 COG2939 Carboxypeptidase C (ca 99.7 5.9E-17 1.3E-21 148.7 7.7 179 28-230 296-493 (498)
9 TIGR03343 biphenyl_bphD 2-hydr 97.3 0.00092 2E-08 57.4 8.1 61 137-226 221-281 (282)
10 TIGR01738 bioH putative pimelo 97.1 0.0016 3.4E-08 53.5 7.1 60 137-225 186-245 (245)
11 PRK03204 haloalkane dehalogena 97.1 0.0013 2.9E-08 57.4 6.7 59 139-225 227-285 (286)
12 TIGR02427 protocat_pcaD 3-oxoa 97.0 0.003 6.6E-08 51.9 7.9 61 137-226 191-251 (251)
13 TIGR03611 RutD pyrimidine util 97.0 0.0026 5.6E-08 52.9 7.4 60 138-226 197-256 (257)
14 PLN02679 hydrolase, alpha/beta 96.9 0.0039 8.5E-08 56.4 8.1 66 138-228 291-357 (360)
15 PRK10349 carboxylesterase BioH 96.9 0.0037 7.9E-08 53.1 7.4 63 135-226 192-254 (256)
16 TIGR03056 bchO_mg_che_rel puta 96.9 0.0031 6.7E-08 53.5 7.0 59 139-226 220-278 (278)
17 PRK10673 acyl-CoA esterase; Pr 96.8 0.0037 8E-08 52.7 7.0 60 139-227 195-254 (255)
18 PRK00870 haloalkane dehalogena 96.8 0.0047 1E-07 54.0 7.2 69 133-228 233-301 (302)
19 PRK07581 hypothetical protein; 96.7 0.0055 1.2E-07 54.6 7.5 60 138-226 274-334 (339)
20 TIGR01250 pro_imino_pep_2 prol 96.7 0.0076 1.7E-07 50.7 7.8 63 134-226 226-288 (288)
21 PLN03084 alpha/beta hydrolase 96.6 0.0059 1.3E-07 56.1 7.1 58 139-226 325-382 (383)
22 PRK03592 haloalkane dehalogena 96.5 0.0044 9.5E-08 53.9 5.5 64 139-230 228-291 (295)
23 PLN02824 hydrolase, alpha/beta 96.5 0.0069 1.5E-07 52.6 6.3 60 139-227 234-293 (294)
24 PHA02857 monoglyceride lipase; 96.5 0.0097 2.1E-07 51.1 7.1 64 137-228 207-273 (276)
25 KOG4178 Soluble epoxide hydrol 96.4 0.0059 1.3E-07 54.3 5.6 63 137-227 256-319 (322)
26 TIGR01392 homoserO_Ac_trn homo 96.3 0.017 3.7E-07 51.9 8.3 64 138-226 287-351 (351)
27 TIGR02240 PHA_depoly_arom poly 96.2 0.013 2.9E-07 50.4 6.7 62 138-229 206-267 (276)
28 PRK08775 homoserine O-acetyltr 96.2 0.0065 1.4E-07 54.4 4.9 61 139-227 277-338 (343)
29 PLN02578 hydrolase 96.2 0.02 4.4E-07 51.6 7.7 60 138-227 295-354 (354)
30 PLN02965 Probable pheophorbida 96.1 0.014 3E-07 49.7 6.3 60 138-226 192-251 (255)
31 KOG1454 Predicted hydrolase/ac 96.1 0.015 3.2E-07 52.2 6.6 60 139-227 264-323 (326)
32 PLN03087 BODYGUARD 1 domain co 95.9 0.03 6.5E-07 53.0 7.7 67 132-227 410-478 (481)
33 PRK14875 acetoin dehydrogenase 95.9 0.018 3.9E-07 51.5 5.9 62 134-227 309-370 (371)
34 PRK00175 metX homoserine O-ace 95.8 0.038 8.2E-07 50.4 7.9 66 138-228 308-374 (379)
35 PF08386 Abhydrolase_4: TAP-li 95.8 0.048 1E-06 40.5 7.0 65 139-232 34-98 (103)
36 PRK06765 homoserine O-acetyltr 95.7 0.05 1.1E-06 50.1 8.2 67 137-228 321-388 (389)
37 PLN02298 hydrolase, alpha/beta 95.7 0.036 7.8E-07 49.1 6.9 64 138-228 250-317 (330)
38 PRK10749 lysophospholipase L2; 95.6 0.041 8.8E-07 49.1 7.2 69 138-228 258-329 (330)
39 PF12697 Abhydrolase_6: Alpha/ 95.5 0.033 7.1E-07 44.7 5.5 54 137-219 174-227 (228)
40 PLN02385 hydrolase; alpha/beta 95.4 0.059 1.3E-06 48.3 7.5 64 138-228 278-345 (349)
41 PLN02894 hydrolase, alpha/beta 95.4 0.046 9.9E-07 50.4 6.7 60 139-227 325-384 (402)
42 PRK11126 2-succinyl-6-hydroxy- 95.3 0.056 1.2E-06 45.1 6.7 30 197-226 211-240 (242)
43 TIGR03695 menH_SHCHC 2-succiny 95.1 0.069 1.5E-06 43.5 6.5 59 138-226 193-251 (251)
44 PRK06489 hypothetical protein; 95.1 0.082 1.8E-06 47.7 7.4 62 138-228 291-357 (360)
45 PLN02652 hydrolase; alpha/beta 94.1 0.13 2.8E-06 47.4 6.4 64 138-228 323-387 (395)
46 TIGR01607 PST-A Plasmodium sub 94.1 0.21 4.6E-06 44.7 7.6 62 139-227 270-332 (332)
47 PF00326 Peptidase_S9: Prolyl 93.9 0.34 7.4E-06 40.0 8.0 63 138-225 143-206 (213)
48 PLN02511 hydrolase 93.6 0.075 1.6E-06 48.7 3.7 74 137-238 296-375 (388)
49 PF00561 Abhydrolase_1: alpha/ 93.3 0.17 3.7E-06 41.2 5.1 57 137-222 173-229 (230)
50 PRK10566 esterase; Provisional 92.7 0.32 6.9E-06 40.9 6.1 61 139-226 186-246 (249)
51 PRK11460 putative hydrolase; P 92.6 0.45 9.7E-06 40.3 6.9 63 138-225 147-209 (232)
52 PF03583 LIP: Secretory lipase 92.1 0.87 1.9E-05 40.1 8.3 68 139-232 219-289 (290)
53 PLN02980 2-oxoglutarate decarb 92.0 0.45 9.6E-06 51.6 7.5 77 135-229 1564-1640(1655)
54 PF07519 Tannase: Tannase and 91.9 0.7 1.5E-05 43.7 7.9 89 128-233 342-432 (474)
55 PRK05855 short chain dehydroge 91.4 0.27 5.8E-06 46.6 4.5 59 139-227 233-291 (582)
56 KOG4409 Predicted hydrolase/ac 90.6 1.2 2.5E-05 40.4 7.5 71 127-226 292-362 (365)
57 PF02230 Abhydrolase_2: Phosph 90.0 0.82 1.8E-05 38.0 5.8 59 139-226 155-213 (216)
58 TIGR01249 pro_imino_pep_1 prol 89.9 1.4 3E-05 38.6 7.4 43 139-210 248-290 (306)
59 TIGR03100 hydr1_PEP hydrolase, 88.7 1.5 3.2E-05 38.0 6.6 72 133-226 201-273 (274)
60 COG0596 MhpC Predicted hydrola 87.7 1.8 3.9E-05 34.6 6.3 61 137-225 219-279 (282)
61 PLN02872 triacylglycerol lipas 87.5 2 4.3E-05 39.7 7.0 61 139-227 325-388 (395)
62 PF12695 Abhydrolase_5: Alpha/ 87.3 1.6 3.5E-05 33.0 5.4 48 133-208 98-145 (145)
63 COG0400 Predicted esterase [Ge 87.0 2 4.4E-05 36.0 6.2 60 138-227 145-204 (207)
64 PLN02211 methyl indole-3-aceta 86.7 2.2 4.8E-05 36.9 6.6 59 139-227 211-269 (273)
65 KOG2382 Predicted alpha/beta h 85.6 0.71 1.5E-05 41.2 2.8 30 197-226 282-311 (315)
66 TIGR01836 PHA_synth_III_C poly 84.0 2.6 5.7E-05 37.7 5.9 62 138-227 285-349 (350)
67 COG1506 DAP2 Dipeptidyl aminop 83.2 4.3 9.3E-05 39.7 7.4 59 139-224 551-609 (620)
68 PRK10985 putative hydrolase; P 82.7 5 0.00011 35.5 7.1 51 134-213 250-300 (324)
69 COG2267 PldB Lysophospholipase 82.0 4.4 9.6E-05 35.8 6.4 65 138-229 227-295 (298)
70 PRK13604 luxD acyl transferase 81.4 7.6 0.00016 34.7 7.7 64 133-224 196-259 (307)
71 TIGR01838 PHA_synth_I poly(R)- 77.1 3.5 7.6E-05 39.7 4.4 48 139-215 415-462 (532)
72 PF08840 BAAT_C: BAAT / Acyl-C 75.7 5.5 0.00012 33.3 4.9 48 139-209 115-163 (213)
73 PRK11071 esterase YqiA; Provis 74.9 8.9 0.00019 31.3 5.8 55 138-226 135-189 (190)
74 KOG1552 Predicted alpha/beta h 72.9 6.6 0.00014 34.1 4.7 60 139-227 192-251 (258)
75 PRK07868 acyl-CoA synthetase; 68.9 12 0.00027 38.6 6.5 63 139-230 297-363 (994)
76 PF06821 Ser_hydrolase: Serine 67.6 11 0.00024 30.4 4.7 43 139-211 114-156 (171)
77 PRK05077 frsA fermentation/res 67.5 18 0.00039 33.5 6.7 57 139-227 355-411 (414)
78 PLN02442 S-formylglutathione h 57.8 29 0.00063 30.1 5.9 49 137-210 215-264 (283)
79 PF03096 Ndr: Ndr family; Int 57.3 4.6 0.0001 35.6 0.8 34 197-230 248-281 (283)
80 COG3208 GrsT Predicted thioest 55.7 30 0.00065 29.9 5.4 59 139-226 176-234 (244)
81 KOG2551 Phospholipase/carboxyh 55.4 40 0.00088 28.7 6.0 57 139-225 163-221 (230)
82 COG2945 Predicted hydrolase of 54.8 15 0.00033 30.7 3.3 60 135-225 145-204 (210)
83 PF10503 Esterase_phd: Esteras 48.5 21 0.00046 30.2 3.4 27 139-165 169-195 (220)
84 PF03959 FSH1: Serine hydrolas 48.4 15 0.00034 30.4 2.6 48 139-215 161-208 (212)
85 COG1073 Hydrolases of the alph 47.6 66 0.0014 26.8 6.4 61 140-227 233-296 (299)
86 KOG2931 Differentiation-relate 47.6 35 0.00077 30.4 4.7 35 197-231 275-309 (326)
87 PF07849 DUF1641: Protein of u 43.5 8.1 0.00018 23.8 0.1 17 85-101 15-31 (42)
88 TIGR01840 esterase_phb esteras 43.4 35 0.00077 27.9 4.0 31 140-170 169-199 (212)
89 PF01738 DLH: Dienelactone hyd 40.4 1.9E+02 0.004 23.5 7.9 65 135-224 141-210 (218)
90 PRK10115 protease 2; Provision 37.5 72 0.0016 31.7 5.7 66 139-226 605-673 (686)
91 COG3509 LpqC Poly(3-hydroxybut 32.8 1.6E+02 0.0034 26.4 6.4 68 144-215 213-282 (312)
92 PF05414 DUF1717: Viral domain 29.7 32 0.0007 24.6 1.3 11 139-149 40-50 (101)
93 PRK05371 x-prolyl-dipeptidyl a 28.9 2.6E+02 0.0056 28.3 8.0 29 138-166 454-482 (767)
94 KOG2564 Predicted acetyltransf 26.0 91 0.002 27.9 3.7 38 194-232 294-331 (343)
95 TIGR00190 thiC thiamine biosyn 24.9 62 0.0014 30.1 2.6 32 198-230 257-288 (423)
96 KOG3043 Predicted hydrolase re 23.9 2.8E+02 0.006 23.9 6.1 78 133-226 158-238 (242)
97 PRK13352 thiamine biosynthesis 23.6 69 0.0015 29.9 2.6 32 198-230 260-291 (431)
98 KOG3253 Predicted alpha/beta h 23.3 1.9E+02 0.0041 28.7 5.5 33 133-165 298-330 (784)
99 TIGR01680 Veg_Stor_Prot vegeta 22.3 1.4E+02 0.0031 26.2 4.2 39 124-164 146-184 (275)
100 COG4569 MhpF Acetaldehyde dehy 21.9 83 0.0018 26.7 2.6 25 188-213 258-282 (310)
101 PF01964 ThiC: ThiC family; I 21.4 59 0.0013 30.2 1.8 32 198-230 256-287 (420)
102 smart00581 PSP proline-rich do 21.3 71 0.0015 20.9 1.6 18 92-110 10-27 (54)
103 PF02739 5_3_exonuc_N: 5'-3' e 20.8 95 0.0021 25.0 2.7 16 137-152 123-138 (169)
104 PF03767 Acid_phosphat_B: HAD 20.5 1.3E+02 0.0028 25.5 3.6 39 125-165 117-155 (229)
105 PF00702 Hydrolase: haloacid d 20.5 1E+02 0.0022 24.6 2.9 26 125-150 129-154 (215)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-48 Score=356.90 Aligned_cols=221 Identities=40% Similarity=0.727 Sum_probs=184.8
Q ss_pred CCCHHHHHHHhccCCCCccCCCCCCCCcchHHHHHHHHHHHhcccCccCcccCCCCCCchhHHHHHHHHhhhccccCcCC
Q 026353 1 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 80 (240)
Q Consensus 1 lis~~~y~~~~~~C~~~~~~~~~~~~~s~~C~~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
||||++|+.+++.|++...........+..|..+++++......+||+|+|+.+.|.+... .. ........+++
T Consensus 231 liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~--~~----~~~~~~~~~~~ 304 (454)
T KOG1282|consen 231 LISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSY--EL----KKPTDCYGYDP 304 (454)
T ss_pred cCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHHHhccCchhhhcchhhccccc--cc----cccccccccCC
Confidence 7999999999999998532001122346799999999995443389999999999987221 00 00112346789
Q ss_pred CcchhhhhccCcHHHHHhhCCCCCCCCCccccccccccccCCCcccccHHHHHHHHhCC-ccEEEEecCCcccCCchhHH
Q 026353 81 CMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNG-IPVWVFSGDQDSVVPLLGSR 159 (240)
Q Consensus 81 C~~~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~Ll~~~-irVLiY~Gd~D~~~~~~g~~ 159 (240)
|.+...+.|||+++||+||||+....+ +|+.||+.|...+.|...++++++..++.++ +|||||+||.|++||++||+
T Consensus 305 c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~ 383 (454)
T KOG1282|consen 305 CLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQ 383 (454)
T ss_pred chhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhH
Confidence 998777999999999999999875433 7999999998767677789999999999865 99999999999999999999
Q ss_pred HHHHHHHhccCCcccccccceeeC-CEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCCCCC
Q 026353 160 TLIRELARDLNFEVTVPYGAWFHK-QQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNN 233 (240)
Q Consensus 160 ~~i~~l~w~~~~~~~~~~~~w~~~-~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~~~~ 233 (240)
.|+++| +++..++|+||+.+ +|||||+++|++ |+|+||+|||||||+|||++|+.||++||.|++++..
T Consensus 384 ~~i~~L----~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 384 AWIKSL----NLSITDEWRPWYHKGGQVAGYTKTYGG-LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred HHHHhc----cCccccCccCCccCCCceeeeEEEecC-EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999985 57778999999995 899999999999 9999999999999999999999999999999999864
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=7.7e-41 Score=298.07 Aligned_cols=203 Identities=25% Similarity=0.432 Sum_probs=161.0
Q ss_pred CCCHHHHHHHhccCCCCccCCCCCCCCcchHHHHHHHHHHHhcccCccCcccCCCCCCchhHHHHHHHHhhhccccCcCC
Q 026353 1 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 80 (240)
Q Consensus 1 lis~~~y~~~~~~C~~~~~~~~~~~~~s~~C~~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
||+++.|+.+.+.|...... ....+..|.+++..+....+ ++|+||++.+.|.... ...+.
T Consensus 114 li~~~~~~~~~~~c~~~~~~---~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~ 174 (319)
T PLN02213 114 LISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKCTA-KINIHHILTPDCDVTN---------------VTSPD 174 (319)
T ss_pred CCCHHHHHHHHHhcCCCccC---CCCCcHHHHHHHHHHHHHHh-cCCHhhcccCcccCcc---------------CCCCC
Confidence 79999999999999743211 11245789999988877666 7999999976674311 01245
Q ss_pred Ccc---hhhhhccCcHHHHHhhCCCCCCCCCccccccccccccCCCcccccHHHHHHHHhCCccEEEEecCCcccCCchh
Q 026353 81 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 157 (240)
Q Consensus 81 C~~---~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g 157 (240)
|.+ ..+..|||+++||+||||+... ..+|+.||..|.+. .|.+ +.++.+..+|..|+|||||+||.|++||+.|
T Consensus 175 c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~~~-~d~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g 251 (319)
T PLN02213 175 CYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLA 251 (319)
T ss_pred cccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccccc-cccc-cchHHHHHHHhcCceEEEEECCcCeeCCcHh
Confidence 763 2479999999999999997521 13799999988744 3554 4455555556669999999999999999999
Q ss_pred HHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 158 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 158 ~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
+++|+++|+|+. .++|++|+++++++||+|+|+++|||++|+||||||| +||++|++||++||.|+++
T Consensus 252 ~~~wi~~L~w~~----~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 252 TQAWIRSLNYSP----IHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred HHHHHHhcCCCC----CCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999987653 4569999999999999999975599999999999998 6999999999999999864
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.5e-40 Score=303.80 Aligned_cols=203 Identities=25% Similarity=0.430 Sum_probs=162.2
Q ss_pred CCCHHHHHHHhccCCCCccCCCCCCCCcchHHHHHHHHHHHhcccCccCcccCCCCCCchhHHHHHHHHhhhccccCcCC
Q 026353 1 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 80 (240)
Q Consensus 1 lis~~~y~~~~~~C~~~~~~~~~~~~~s~~C~~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
|||++.|+.+++.|+..... ....+..|..++..+....+ ++|+|||+.+.|.... ...+.
T Consensus 228 lI~~~~~~~i~~~c~~~~~~---~~~~~~~C~~~~~~~~~~~~-~~n~yni~~~~~~~~~---------------~~~~~ 288 (433)
T PLN03016 228 LISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKCTA-KINIHHILTPDCDVTN---------------VTSPD 288 (433)
T ss_pred CCCHHHHHHHHHHhcccccc---CCCchHHHHHHHHHHHHHhc-CCChhhccCCcccccc---------------cCCCc
Confidence 79999999999999743111 11346789999998877776 7999999977674321 01245
Q ss_pred Ccc---hhhhhccCcHHHHHhhCCCCCCCCCccccccccccccCCCcccccHHHHHHHHhCCccEEEEecCCcccCCchh
Q 026353 81 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 157 (240)
Q Consensus 81 C~~---~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g 157 (240)
|.. ..++.|||+++||+||||+.... .+|..|+..|.+. .|.+ ++++.+..++.+|+|||||+||.|++||+.|
T Consensus 289 c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~~-~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~G 365 (433)
T PLN03016 289 CYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLA 365 (433)
T ss_pred ccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccccc-cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHh
Confidence 764 24789999999999999975322 3899999988743 3544 4555555666679999999999999999999
Q ss_pred HHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 158 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 158 ~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
+++|+++|+|. ...+|++|+++++++||+++|+++|||++|++|||||| +||++|++||++||.|+++
T Consensus 366 t~~wi~~L~w~----~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 366 TQAWIRSLNYS----PIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHhCCCC----CCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999998665 34679999999999999999974599999999999998 6999999999999999875
No 4
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=3.4e-40 Score=306.65 Aligned_cols=196 Identities=24% Similarity=0.418 Sum_probs=160.4
Q ss_pred CCCHHHHHHHhc----------cCCCCccCCCCCCCCcchHHHHHHHHHH---H--hcccCccCcccCCCCCCchhHHHH
Q 026353 1 MISDEIGLTIMS----------DCDFDDYVSGTSHNMTNSCIEAITEANK---I--VGDYINNYDVILDVCYPTIVEQEL 65 (240)
Q Consensus 1 lis~~~y~~~~~----------~C~~~~~~~~~~~~~s~~C~~~~~~~~~---~--~~~~in~Ydi~~~~C~~~~~~~~~ 65 (240)
||+++.|+.+.+ .|++.. ......|..+...+.. . .+ ++|+|||+.+ |..
T Consensus 241 li~~~~~~~~~~~~~~c~~~~~~c~~~~------~~~~~~c~~a~~~c~~~~~~~~~~-g~n~Ydi~~~-c~~------- 305 (462)
T PTZ00472 241 CVSEEAYDEMSSMVPACQKKIKECNSNP------DDADSSCSVARALCNEYIAVYSAT-GLNNYDIRKP-CIG------- 305 (462)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhccccC------CCcchHHHHHHHHHHHHHHHHHhc-CCChhheecc-CCC-------
Confidence 588888887764 365421 0122346444322211 1 24 6999999986 732
Q ss_pred HHHHhhhccccCcCCCcc-hhhhhccCcHHHHHhhCCCCCCCCCccccccccccccC-CCcccccHHHHHHHHhCCccEE
Q 026353 66 RLRKMATKMSVGVDVCMT-LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSNINILPVLKRIIQNGIPVW 143 (240)
Q Consensus 66 ~~~~~~~~~~~~~~~C~~-~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~-~d~~~~~~~~~~~Ll~~~irVL 143 (240)
++|.+ ..+..|||+++||+||||+. .+|+.|+..|...+ .|.+.++.+.++.||++|+|||
T Consensus 306 -------------~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVL 368 (462)
T PTZ00472 306 -------------PLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVM 368 (462)
T ss_pred -------------CCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEE
Confidence 35765 35899999999999999974 37999999997655 6888899999999999999999
Q ss_pred EEecCCcccCCchhHHHHHHHHHhcc--CCcccccccce-eeCCEEeEEEEEeC-----CeEEEEEEcCCCccCCCCChH
Q 026353 144 VFSGDQDSVVPLLGSRTLIRELARDL--NFEVTVPYGAW-FHKQQVGGWGTEYG-----NLLTFVTVRGAAHMVPYAQPS 215 (240)
Q Consensus 144 iY~Gd~D~~~~~~g~~~~i~~l~w~~--~~~~~~~~~~w-~~~~~v~G~~~~~~-----~~Ltf~~V~~AGHmvP~dqP~ 215 (240)
||+||.|++||+.|+++|+++|+|+. .|. +++|++| .++++++||+|+++ + |+|++|++||||||+|||+
T Consensus 369 iYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~-~a~~~~w~~~~~~v~G~vk~~~~~~~~~-l~~~~V~~AGH~vp~d~P~ 446 (462)
T PTZ00472 369 IYAGDMDFICNWIGNKAWTLALQWPGNAEFN-AAPDVPFSAVDGRWAGLVRSAASNTSSG-FSFVQVYNAGHMVPMDQPA 446 (462)
T ss_pred EEECCcCeecCcHhHHHHHHhCCCCCccchh-hcCccccEecCCEeceEEEEEecccCCC-eEEEEECCCCccChhhHHH
Confidence 99999999999999999999999974 565 7899999 56899999999999 8 9999999999999999999
Q ss_pred HHHHHHHHHHCCCCC
Q 026353 216 RALHLFSSFVHGRRL 230 (240)
Q Consensus 216 ~a~~~~~~fi~g~~~ 230 (240)
++++|+++|+.|+++
T Consensus 447 ~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 447 VALTMINRFLRNRPL 461 (462)
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999876
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=3.8e-39 Score=297.00 Aligned_cols=205 Identities=23% Similarity=0.402 Sum_probs=159.6
Q ss_pred CCCHHHHHHHhccCCCCccCCCCCCCCcchHHHHHHHHHHHhcccCccCcccCCCCCCchhHHHHHHHHhhhccccCcCC
Q 026353 1 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 80 (240)
Q Consensus 1 lis~~~y~~~~~~C~~~~~~~~~~~~~s~~C~~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
|||++.|+.+.+.|...... ....+..|..++.++..... .+|+|+++.+.|..... .....+
T Consensus 230 lI~~~~~~~~~~~c~~~~~~---~~~~~~~C~~~i~~~~~~~~-~~~~~~~~~~~c~~~~~-------------~~~~~~ 292 (437)
T PLN02209 230 LISDELYESLKRICKGNYFS---VDPSNKKCLKLVEEYHKCTD-NINSHHTLIANCDDSNT-------------QHISPD 292 (437)
T ss_pred CCCHHHHHHHHHhccccccc---CCCChHHHHHHHHHHHHHhh-cCCcccccccccccccc-------------ccCCCC
Confidence 69999999999999743111 12346789999988766665 69999876556864321 112345
Q ss_pred Ccc---hhhhhccCcHHHHHhhCCCCCCCCCccccccccccccCCCcccccHHHHHHHHhCCccEEEEecCCcccCCchh
Q 026353 81 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 157 (240)
Q Consensus 81 C~~---~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g 157 (240)
|.. ..+..|||+++||+||||+.... ..|..|+..+.+. .|.+. +++.+.++|.+|+|||||+||.|++||+.|
T Consensus 293 c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~~~-~d~~~-~~~~~~~~l~~girVLiY~GD~D~icn~~G 369 (437)
T PLN02209 293 CYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIPYK-SDIRS-SIPYHMNNSINGYRSLIFSGDHDITMPFQA 369 (437)
T ss_pred cccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhhcc-cchhh-hHHHHHHHHhcCceEEEEECCccccCCcHh
Confidence 754 24789999999999999984322 2799998765432 35443 444444555679999999999999999999
Q ss_pred HHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 158 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 158 ~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
+++|+++|+|.. ..+|++|+++++++||+|+|+|+|||++|+||||||| +||++|++||++||.|++|
T Consensus 370 te~wi~~L~w~~----~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 370 TQAWIKSLNYSI----IDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred HHHHHHhcCCcc----CCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999999986653 4579999999999999999984499999999999998 6999999999999999875
No 6
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=4.7e-39 Score=294.00 Aligned_cols=206 Identities=32% Similarity=0.517 Sum_probs=153.7
Q ss_pred CCCHHHHHHHhccCCCCccCCCCCCCCcchHHHHHHHHHHH------hcccCccCcccCCCCCCchhHHHHHHHHhhhcc
Q 026353 1 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI------VGDYINNYDVILDVCYPTIVEQELRLRKMATKM 74 (240)
Q Consensus 1 lis~~~y~~~~~~C~~~~~~~~~~~~~s~~C~~~~~~~~~~------~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~ 74 (240)
||+++.++.+.+.|..... .......|..+++.+... .+ ++|+|||+.+ |.... . ....
T Consensus 199 li~~~~~~~~~~~~~~~~~----~~~~~~~c~~~~~~~~~~~~~~~~~~-~~n~Ydi~~~-~~~~~--------~-~~~~ 263 (415)
T PF00450_consen 199 LIDDQQYDDLNKACEACPQ----CQKAITECAAALDELSCQYAISQCNG-GINPYDIRQP-CYNPS--------R-SSYD 263 (415)
T ss_dssp SS-HHHHHHHHHHHTTSHS----SSCCHHHHHHHHHHHHHHCHHHHHHT-TSETTSTTSE-ETT-S--------H-CTTC
T ss_pred cccHHHHHHHHHHhhcccc----ccchhhHHHHHHHhhhhhcccccccC-Ccceeeeecc-ccccc--------c-cccc
Confidence 6899999999999975421 123568999999888763 34 7999999987 53210 0 0000
Q ss_pred ccCcCCC-cchhhhhccCcHHHHHhhCCCCCCCCCcccccccccc--ccCCCcccccHHHHHHHHhCCccEEEEecCCcc
Q 026353 75 SVGVDVC-MTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLN--YSDTDSNINILPVLKRIIQNGIPVWVFSGDQDS 151 (240)
Q Consensus 75 ~~~~~~C-~~~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~--~~~~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~ 151 (240)
......| ....+..|||+++||+||||+.... ..|..|++.|. ....|.+.++.+.+++||++++|||||+||.|+
T Consensus 264 ~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~-~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~ 342 (415)
T PF00450_consen 264 NSPSNDPPDDDYLEAYLNRPDVREALHVPVDSN-VNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDL 342 (415)
T ss_dssp CCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTS-SS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-S
T ss_pred ccccccccchhhHHHHhccHHHHHhhCCCcccC-CcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCE
Confidence 1122233 3456899999999999999973112 48999999883 223678899999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHhccCCcccccccceee--CCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCC
Q 026353 152 VVPLLGSRTLIRELARDLNFEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHG 227 (240)
Q Consensus 152 ~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~--~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g 227 (240)
+||+.|+++|+++|.|+ ...+|++|.. +++++||+|+++| |||++|+|||||||+|||++|++||++||.|
T Consensus 343 i~n~~Gt~~~i~~L~w~----~~~~f~~~~~~~~~~~~G~~k~~~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 343 ICNFLGTERWIDNLNWS----GKDGFRQWPRKVNGQVAGYVKQYGN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp SS-HHHHHHHHHCTECT----EEEEEEEEEEETTCSEEEEEEEETT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred EEEeccchhhhhccccC----cccccccccccccccccceeEEecc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 99999999999997665 3456778876 8999999999999 9999999999999999999999999999987
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2.1e-24 Score=186.81 Aligned_cols=138 Identities=23% Similarity=0.352 Sum_probs=122.5
Q ss_pred hhhhhccCcHHHHHhhCCCCCCCCCccccccccccccC-CCcccccHHHHHHHHhCCccEEEEecCCcccCCchhHHHHH
Q 026353 84 LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLI 162 (240)
Q Consensus 84 ~~~~~ylN~~~V~~aLhv~~~~~~~~w~~cs~~v~~~~-~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i 162 (240)
+.+.++||-| ||++|+|.+.. ..|-..+..++-.. .|+|++++..+.+||++|++|.||||++|+||++.|+++|+
T Consensus 272 D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv 348 (414)
T KOG1283|consen 272 DKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWV 348 (414)
T ss_pred HHHHHHhccc-ccccccccCCC--CcccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhh
Confidence 3488999886 99999998755 48999999887444 89999999999999999999999999999999999999999
Q ss_pred HHHHhcc--CCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHC
Q 026353 163 RELARDL--NFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVH 226 (240)
Q Consensus 163 ~~l~w~~--~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~ 226 (240)
.+|.|.. .|. ..+|...+++-..+||.|+|+| |.|.+|..||||||.|+|+.|.+|++.+..
T Consensus 349 ~~l~w~~~p~f~-~~~r~~~~~s~~l~gy~ktykn-l~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 349 EKLEWSAKPSFQ-VSPRVGITVSRVLEGYEKTYKN-LSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred hheecCCCCccc-cceeeeccceeecchhhhhhcc-ceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 9999984 455 4677777777789999999999 999999999999999999999999987653
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=99.68 E-value=5.9e-17 Score=148.74 Aligned_cols=179 Identities=20% Similarity=0.317 Sum_probs=136.6
Q ss_pred cchHHHHHHHHHHHh--------cccCccCcccCCCCCC-chhHHHHHHHHhhhccccCcCCCcch--hhhhccCcHHHH
Q 026353 28 TNSCIEAITEANKIV--------GDYINNYDVILDVCYP-TIVEQELRLRKMATKMSVGVDVCMTL--ERFFYLNLPEVQ 96 (240)
Q Consensus 28 s~~C~~~~~~~~~~~--------~~~in~Ydi~~~~C~~-~~~~~~~~~~~~~~~~~~~~~~C~~~--~~~~ylN~~~V~ 96 (240)
...|..+...+.... ++.+|+||+... |.. +. ..-|.+. ....|++...++
T Consensus 296 ~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~-----------------~~~~y~~~~~~ld~~~~~~~~ 357 (498)
T COG2939 296 LQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE-CRDPGL-----------------GGSCYDTLSTSLDYFNFDPEQ 357 (498)
T ss_pred hhHHHHHHHHHHhcchhhhccccccccccccchhh-cCCCCc-----------------ccccccceeeccccccccchh
Confidence 467877776665431 123899999875 532 11 1235554 367899988889
Q ss_pred HhhCCCCCCCCCcccccccccc--cc-C-CCcccccHHHHHHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhc--cC
Q 026353 97 KALHANRTNLPYGWSMCSGVLN--YS-D-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARD--LN 170 (240)
Q Consensus 97 ~aLhv~~~~~~~~w~~cs~~v~--~~-~-~d~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~--~~ 170 (240)
++++.... .|..|+..+. |. . .+++.+....+..++.+++.+++|.||.|.+|++.|++.|..+|+|. .+
T Consensus 358 ~~~~~~~d----~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g 433 (498)
T COG2939 358 EVNDPEVD----NISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASG 433 (498)
T ss_pred cccccccc----chhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecc
Confidence 98887542 7999998875 43 2 57778888899999999999999999999999999999999999996 35
Q ss_pred Ccccccccceee--CCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 171 FEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 171 ~~~~~~~~~w~~--~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
|. .+.-.+|.. ..+..|-.++++| |+|+.++.||||||+|+|+.++.|++.|+.+...
T Consensus 434 ~~-d~~~~~~~~~~t~e~~~~~~s~~n-~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~ 493 (498)
T COG2939 434 YF-DASTPFFWSRLTLEEMGGYKSYRN-LTFLRIYEAGHMVPYDRPESSLEMVNLWINGYGA 493 (498)
T ss_pred hh-hhcCCCcccccchhhcccccccCC-ceEEEEecCcceeecCChHHHHHHHHHHHhhccc
Confidence 65 344445543 4455565666778 9999999999999999999999999999998543
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.34 E-value=0.00092 Score=57.37 Aligned_cols=61 Identities=16% Similarity=0.217 Sum_probs=50.0
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
+-.++||+..|..|.++|....+++.+.+ .+ ..++.|.+|||+++.++|+.
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~ 271 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADA 271 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHH
Confidence 34789999999999999976666554431 12 66788999999999999999
Q ss_pred HHHHHHHHHC
Q 026353 217 ALHLFSSFVH 226 (240)
Q Consensus 217 a~~~~~~fi~ 226 (240)
..+++..|+.
T Consensus 272 ~~~~i~~fl~ 281 (282)
T TIGR03343 272 FNRLVIDFLR 281 (282)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 10
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.13 E-value=0.0016 Score=53.51 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=48.4
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
+-..+||+..|..|.+++....+.+.+. + .+ -++..+.++||+++.++|++
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~------~----------------------~~-~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKL------A----------------------PH-SELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHh------C----------------------CC-CeEEEeCCCCCCccccCHHH
Confidence 4478999999999999998776654332 1 12 45678999999999999999
Q ss_pred HHHHHHHHH
Q 026353 217 ALHLFSSFV 225 (240)
Q Consensus 217 a~~~~~~fi 225 (240)
....+..||
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999986
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.11 E-value=0.0013 Score=57.38 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=47.6
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.++|||..|+.|.+++.....+.+.+ .+ .+ .++..|.+|||+++.++|++..
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~-----~i----------------------p~-~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRA-----TF----------------------PD-HVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHH-----hc----------------------CC-CeEEEcCCCcccccccCHHHHH
Confidence 69999999999998876554444432 12 22 6788999999999999999999
Q ss_pred HHHHHHH
Q 026353 219 HLFSSFV 225 (240)
Q Consensus 219 ~~~~~fi 225 (240)
+++.+|+
T Consensus 279 ~~i~~~~ 285 (286)
T PRK03204 279 AAIIERF 285 (286)
T ss_pred HHHHHhc
Confidence 9999997
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.03 E-value=0.003 Score=51.88 Aligned_cols=61 Identities=25% Similarity=0.367 Sum_probs=49.2
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
+-.++||+..|+.|.++|....+.+.+. + .+ .++..+.++||+++.++|+.
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~------~----------------------~~-~~~~~~~~~gH~~~~~~p~~ 241 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADL------V----------------------PG-ARFAEIRGAGHIPCVEQPEA 241 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHh------C----------------------CC-ceEEEECCCCCcccccChHH
Confidence 3478999999999999998766554432 1 12 56778999999999999999
Q ss_pred HHHHHHHHHC
Q 026353 217 ALHLFSSFVH 226 (240)
Q Consensus 217 a~~~~~~fi~ 226 (240)
..+.+..|+.
T Consensus 242 ~~~~i~~fl~ 251 (251)
T TIGR02427 242 FNAALRDFLR 251 (251)
T ss_pred HHHHHHHHhC
Confidence 9999999973
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.01 E-value=0.0026 Score=52.92 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=49.4
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
..++||+.+|+.|.++|....+++.+.+ .+ ..+..+.++||+.+.++|+..
T Consensus 197 i~~P~l~i~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~~~~~ 247 (257)
T TIGR03611 197 IQHPVLLIANRDDMLVPYTQSLRLAAAL----------------------------PN-AQLKLLPYGGHASNVTDPETF 247 (257)
T ss_pred cCccEEEEecCcCcccCHHHHHHHHHhc----------------------------CC-ceEEEECCCCCCccccCHHHH
Confidence 3789999999999999988776655431 12 456778999999999999999
Q ss_pred HHHHHHHHC
Q 026353 218 LHLFSSFVH 226 (240)
Q Consensus 218 ~~~~~~fi~ 226 (240)
...+.+||.
T Consensus 248 ~~~i~~fl~ 256 (257)
T TIGR03611 248 NRALLDFLK 256 (257)
T ss_pred HHHHHHHhc
Confidence 999999984
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=96.91 E-value=0.0039 Score=56.42 Aligned_cols=66 Identities=23% Similarity=0.359 Sum_probs=51.3
Q ss_pred CCccEEEEecCCcccCCchhH-HHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGS-RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~-~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
-.++|||..|+.|.++|..+. .++++.|. .. ..+ ..+.+|.+|||+++.++|++
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~--~~----------------------ip~-~~l~~i~~aGH~~~~E~Pe~ 345 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLP--SQ----------------------LPN-VTLYVLEGVGHCPHDDRPDL 345 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhh--cc----------------------CCc-eEEEEcCCCCCCccccCHHH
Confidence 378999999999999998753 23444431 01 123 67888999999999999999
Q ss_pred HHHHHHHHHCCC
Q 026353 217 ALHLFSSFVHGR 228 (240)
Q Consensus 217 a~~~~~~fi~g~ 228 (240)
..+.+.+|+...
T Consensus 346 ~~~~I~~FL~~~ 357 (360)
T PLN02679 346 VHEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHHhc
Confidence 999999999653
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.90 E-value=0.0037 Score=53.11 Aligned_cols=63 Identities=19% Similarity=0.200 Sum_probs=49.2
Q ss_pred HHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh
Q 026353 135 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 214 (240)
Q Consensus 135 Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP 214 (240)
|-.-.++|||..|..|.++|....+...+. + .+ ..++.|.++||+++.++|
T Consensus 192 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~------i----------------------~~-~~~~~i~~~gH~~~~e~p 242 (256)
T PRK10349 192 LQNVSMPFLRLYGYLDGLVPRKVVPMLDKL------W----------------------PH-SESYIFAKAAHAPFISHP 242 (256)
T ss_pred HhhcCCCeEEEecCCCccCCHHHHHHHHHh------C----------------------CC-CeEEEeCCCCCCccccCH
Confidence 334478999999999999987665433322 1 22 578889999999999999
Q ss_pred HHHHHHHHHHHC
Q 026353 215 SRALHLFSSFVH 226 (240)
Q Consensus 215 ~~a~~~~~~fi~ 226 (240)
+...+.+.+|-.
T Consensus 243 ~~f~~~l~~~~~ 254 (256)
T PRK10349 243 AEFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHHhc
Confidence 999999998854
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.89 E-value=0.0031 Score=53.53 Aligned_cols=59 Identities=24% Similarity=0.357 Sum_probs=48.7
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.+++|+..|+.|.++|....+.+.+.+ .+ ..++.+.++||+++.++|++..
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~~ 270 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRV----------------------------PT-ATLHVVPGGGHLVHEEQADGVV 270 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhc----------------------------cC-CeEEEECCCCCcccccCHHHHH
Confidence 689999999999999987776665431 11 4567789999999999999999
Q ss_pred HHHHHHHC
Q 026353 219 HLFSSFVH 226 (240)
Q Consensus 219 ~~~~~fi~ 226 (240)
+.+..|+.
T Consensus 271 ~~i~~f~~ 278 (278)
T TIGR03056 271 GLILQAAE 278 (278)
T ss_pred HHHHHHhC
Confidence 99999984
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=96.85 E-value=0.0037 Score=52.67 Aligned_cols=60 Identities=18% Similarity=0.296 Sum_probs=48.7
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
..+||+..|+.|..++....+.+.+. + .+ .++..+.++||+.+.++|+...
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~------~----------------------~~-~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQ------F----------------------PQ-ARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHh------C----------------------CC-cEEEEeCCCCCeeeccCHHHHH
Confidence 57999999999998886555544332 1 23 6788899999999999999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
+.+.+|+..
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999965
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.76 E-value=0.0047 Score=54.03 Aligned_cols=69 Identities=12% Similarity=0.145 Sum_probs=51.1
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCC
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 212 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~d 212 (240)
..|.+-.+++||..|+.|.++|... ++ +.+ .++ .+ .+ ..+..+.++||+++.+
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~-~~~-----~~~-~~------------------~~-~~~~~i~~~gH~~~~e 285 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AI-LQK-----RIP-GA------------------AG-QPHPTIKGAGHFLQED 285 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HH-HHh-----hcc-cc------------------cc-cceeeecCCCccchhh
Confidence 3344558999999999999999754 43 332 111 00 11 4577899999999999
Q ss_pred ChHHHHHHHHHHHCCC
Q 026353 213 QPSRALHLFSSFVHGR 228 (240)
Q Consensus 213 qP~~a~~~~~~fi~g~ 228 (240)
+|+.....+..|+...
T Consensus 286 ~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 286 SGEELAEAVLEFIRAT 301 (302)
T ss_pred ChHHHHHHHHHHHhcC
Confidence 9999999999999654
No 19
>PRK07581 hypothetical protein; Validated
Probab=96.73 E-value=0.0055 Score=54.64 Aligned_cols=60 Identities=10% Similarity=0.139 Sum_probs=50.1
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcC-CCccCCCCChHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~~ 216 (240)
-.+++||..|+.|.++|....+.+.+.+ + + ..++.|.+ |||+++..+|..
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i------p----------------------~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI------P----------------------N-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC------C----------------------C-CeEEEeCCCCCccccccCcHH
Confidence 4789999999999999988877665431 1 1 46778998 999999999999
Q ss_pred HHHHHHHHHC
Q 026353 217 ALHLFSSFVH 226 (240)
Q Consensus 217 a~~~~~~fi~ 226 (240)
...++++|+.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.69 E-value=0.0076 Score=50.74 Aligned_cols=63 Identities=17% Similarity=0.337 Sum_probs=47.1
Q ss_pred HHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCC
Q 026353 134 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 213 (240)
Q Consensus 134 ~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dq 213 (240)
.|.+-+++||+..|+.|.+ +....+.+.+. ++ + ..++.+.++||+++.++
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~------~~----------------------~-~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQEL------IA----------------------G-SRLVVFPDGSHMTMIED 275 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHh------cc----------------------C-CeEEEeCCCCCCcccCC
Confidence 3444579999999999985 44444444432 11 1 45677899999999999
Q ss_pred hHHHHHHHHHHHC
Q 026353 214 PSRALHLFSSFVH 226 (240)
Q Consensus 214 P~~a~~~~~~fi~ 226 (240)
|++..+.+.+|+.
T Consensus 276 p~~~~~~i~~fl~ 288 (288)
T TIGR01250 276 PEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999974
No 21
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.63 E-value=0.0059 Score=56.06 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=48.3
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.++|||..|+.|.+++....+++.+.. + ..++.|.+|||+++.++|++..
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~-----------------------------~-a~l~vIp~aGH~~~~E~Pe~v~ 374 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS-----------------------------Q-HKLIELPMAGHHVQEDCGEELG 374 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc-----------------------------C-CeEEEECCCCCCcchhCHHHHH
Confidence 679999999999998887665544320 1 4678899999999999999999
Q ss_pred HHHHHHHC
Q 026353 219 HLFSSFVH 226 (240)
Q Consensus 219 ~~~~~fi~ 226 (240)
..|.+|+.
T Consensus 375 ~~I~~Fl~ 382 (383)
T PLN03084 375 GIISGILS 382 (383)
T ss_pred HHHHHHhh
Confidence 99999985
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=96.54 E-value=0.0044 Score=53.92 Aligned_cols=64 Identities=13% Similarity=0.247 Sum_probs=51.4
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.++|||.+|+.|.+++.....+++..+. .+ .++..+.+|||+++.++|++..
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP---------------------------NQ-LEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh---------------------------hh-cceeeccCcchhhhhcCHHHHH
Confidence 7899999999999996666667665420 12 4566788999999999999999
Q ss_pred HHHHHHHCCCCC
Q 026353 219 HLFSSFVHGRRL 230 (240)
Q Consensus 219 ~~~~~fi~g~~~ 230 (240)
+.+..|+.....
T Consensus 280 ~~i~~fl~~~~~ 291 (295)
T PRK03592 280 AAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHHhcc
Confidence 999999976544
No 23
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.47 E-value=0.0069 Score=52.63 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=48.9
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.+++||..|..|.++|....++ +.++ . .+ ..++.|.+|||+++.++|++..
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~-~~~~------~---------------------~~-~~~~~i~~~gH~~~~e~p~~~~ 284 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRA-YANF------D---------------------AV-EDFIVLPGVGHCPQDEAPELVN 284 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHH-HHhc------C---------------------Cc-cceEEeCCCCCChhhhCHHHHH
Confidence 7899999999999999876655 3321 0 11 4677899999999999999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
+.+.+|+.+
T Consensus 285 ~~i~~fl~~ 293 (294)
T PLN02824 285 PLIESFVAR 293 (294)
T ss_pred HHHHHHHhc
Confidence 999999964
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=96.47 E-value=0.0097 Score=51.08 Aligned_cols=64 Identities=13% Similarity=0.292 Sum_probs=50.6
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChH-
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS- 215 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~- 215 (240)
+-.++|||..|+.|.+||....+++.+.+. .+ -++..+.+|||++..++|+
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~---------------------------~~-~~~~~~~~~gH~~~~e~~~~ 258 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHAN---------------------------CN-REIKIYEGAKHHLHKETDEV 258 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHcc---------------------------CC-ceEEEeCCCcccccCCchhH
Confidence 347899999999999999999988876521 11 5688899999999999884
Q ss_pred --HHHHHHHHHHCCC
Q 026353 216 --RALHLFSSFVHGR 228 (240)
Q Consensus 216 --~a~~~~~~fi~g~ 228 (240)
.+++-+.+||.+.
T Consensus 259 ~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 259 KKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHHHHHh
Confidence 4666667788764
No 25
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.45 E-value=0.0059 Score=54.34 Aligned_cols=63 Identities=30% Similarity=0.435 Sum_probs=48.8
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeE-EEEEEcCCCccCCCCChH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLL-TFVTVRGAAHMVPYAQPS 215 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~L-tf~~V~~AGHmvP~dqP~ 215 (240)
+-.++|+++.|+.|.+++.....+..+++ .+ + | .-+.+.|+||.|++++|+
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~---------vp---~----------------l~~~vv~~~~gH~vqqe~p~ 307 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKD---------VP---R----------------LTERVVIEGIGHFVQQEKPQ 307 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHh---------hc---c----------------ccceEEecCCcccccccCHH
Confidence 33689999999999999999444443331 11 1 3 456789999999999999
Q ss_pred HHHHHHHHHHCC
Q 026353 216 RALHLFSSFVHG 227 (240)
Q Consensus 216 ~a~~~~~~fi~g 227 (240)
+..+++..|++.
T Consensus 308 ~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 308 EVNQAILGFINS 319 (322)
T ss_pred HHHHHHHHHHHh
Confidence 999999999863
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.35 E-value=0.017 Score=51.87 Aligned_cols=64 Identities=22% Similarity=0.288 Sum_probs=50.3
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEc-CCCccCCCCChHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~-~AGHmvP~dqP~~ 216 (240)
-.+++|+..|+.|.++|....++..+.+... .+ ..+|+.|. +|||+++.++|++
T Consensus 287 I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~------------------------~v~~~~i~~~~GH~~~le~p~~ 341 (351)
T TIGR01392 287 IKAPFLVVSITSDWLFPPAESRELAKALPAA-GL------------------------RVTYVEIESPYGHDAFLVETDQ 341 (351)
T ss_pred CCCCEEEEEeCCccccCHHHHHHHHHHHhhc-CC------------------------ceEEEEeCCCCCcchhhcCHHH
Confidence 3689999999999999999888776654210 00 04566675 8999999999999
Q ss_pred HHHHHHHHHC
Q 026353 217 ALHLFSSFVH 226 (240)
Q Consensus 217 a~~~~~~fi~ 226 (240)
..+.+.+|+.
T Consensus 342 ~~~~l~~FL~ 351 (351)
T TIGR01392 342 VEELIRGFLR 351 (351)
T ss_pred HHHHHHHHhC
Confidence 9999999974
No 27
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=96.23 E-value=0.013 Score=50.38 Aligned_cols=62 Identities=21% Similarity=0.403 Sum_probs=48.8
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
-.++|||..|+.|-++|....++..+. + .+ .+++.+. +|||++.++|++.
T Consensus 206 i~~P~lii~G~~D~~v~~~~~~~l~~~------~----------------------~~-~~~~~i~-~gH~~~~e~p~~~ 255 (276)
T TIGR02240 206 IQQPTLVLAGDDDPIIPLINMRLLAWR------I----------------------PN-AELHIID-DGHLFLITRAEAV 255 (276)
T ss_pred CCCCEEEEEeCCCCcCCHHHHHHHHHh------C----------------------CC-CEEEEEc-CCCchhhccHHHH
Confidence 378999999999999998876665432 1 11 4566665 5999999999999
Q ss_pred HHHHHHHHCCCC
Q 026353 218 LHLFSSFVHGRR 229 (240)
Q Consensus 218 ~~~~~~fi~g~~ 229 (240)
...+.+|+.+..
T Consensus 256 ~~~i~~fl~~~~ 267 (276)
T TIGR02240 256 APIIMKFLAEER 267 (276)
T ss_pred HHHHHHHHHHhh
Confidence 999999997643
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.23 E-value=0.0065 Score=54.43 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=50.0
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcC-CCccCCCCChHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 217 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~~a 217 (240)
.+++||..|+.|.++|....++..+.+. .+ -.++.|.+ |||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 5799999999999999887777665420 11 45777874 9999999999999
Q ss_pred HHHHHHHHCC
Q 026353 218 LHLFSSFVHG 227 (240)
Q Consensus 218 ~~~~~~fi~g 227 (240)
..++..||..
T Consensus 329 ~~~l~~FL~~ 338 (343)
T PRK08775 329 DAILTTALRS 338 (343)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 29
>PLN02578 hydrolase
Probab=96.17 E-value=0.02 Score=51.58 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=47.0
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
-.+++|+.+|+.|.+++....+++.+. + .+ ..++.+ ++||+.+.++|++.
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~------~----------------------p~-a~l~~i-~~GH~~~~e~p~~~ 344 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAF------Y----------------------PD-TTLVNL-QAGHCPHDEVPEQV 344 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHh------C----------------------CC-CEEEEe-CCCCCccccCHHHH
Confidence 378999999999999887766554332 1 12 345566 69999999999999
Q ss_pred HHHHHHHHCC
Q 026353 218 LHLFSSFVHG 227 (240)
Q Consensus 218 ~~~~~~fi~g 227 (240)
.+.+..|+.+
T Consensus 345 ~~~I~~fl~~ 354 (354)
T PLN02578 345 NKALLEWLSS 354 (354)
T ss_pred HHHHHHHHhC
Confidence 9999999853
No 30
>PLN02965 Probable pheophorbidase
Probab=96.14 E-value=0.014 Score=49.71 Aligned_cols=60 Identities=8% Similarity=0.200 Sum_probs=48.5
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
..+++|+..|..|.++|....++..+. + .+ -.++.+.+|||++...+|++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~------~----------------------~~-a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVEN------W----------------------PP-AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHh------C----------------------Cc-ceEEEecCCCCchhhcCHHHH
Confidence 478999999999999988655554432 1 12 456778999999999999999
Q ss_pred HHHHHHHHC
Q 026353 218 LHLFSSFVH 226 (240)
Q Consensus 218 ~~~~~~fi~ 226 (240)
..++.+|+.
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999974
No 31
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.12 E-value=0.015 Score=52.24 Aligned_cols=60 Identities=30% Similarity=0.526 Sum_probs=50.1
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
+.+|||..|+.|.++|....+...++ . .| ..+..|.+|||.+..++|++.-
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~------~----------------------pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK------L----------------------PN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh------C----------------------CC-ceEEEeCCCCcccccCCHHHHH
Confidence 47899999999999999855444332 1 23 8899999999999999999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
..+..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999865
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=95.90 E-value=0.03 Score=52.98 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=52.3
Q ss_pred HHHHHh-CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCC
Q 026353 132 LKRIIQ-NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 210 (240)
Q Consensus 132 ~~~Ll~-~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP 210 (240)
+..+++ -.+++||..|+.|.++|....+...+.+ + + -.++.|.+|||+.+
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i------P----------------------~-a~l~vI~~aGH~~~ 460 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV------P----------------------R-ARVKVIDDKDHITI 460 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC------C----------------------C-CEEEEeCCCCCcch
Confidence 344443 3789999999999999998877654431 1 1 45778999999999
Q ss_pred C-CChHHHHHHHHHHHCC
Q 026353 211 Y-AQPSRALHLFSSFVHG 227 (240)
Q Consensus 211 ~-dqP~~a~~~~~~fi~g 227 (240)
. ++|+...+.+..|...
T Consensus 461 v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 461 VVGRQKEFARELEEIWRR 478 (481)
T ss_pred hhcCHHHHHHHHHHHhhc
Confidence 6 8999999999999753
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=95.86 E-value=0.018 Score=51.50 Aligned_cols=62 Identities=24% Similarity=0.424 Sum_probs=48.2
Q ss_pred HHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCC
Q 026353 134 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 213 (240)
Q Consensus 134 ~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dq 213 (240)
.+-+-.++||+..|+.|.++|.... +. + +++ +++..+.++||+...++
T Consensus 309 ~l~~i~~Pvlii~g~~D~~vp~~~~----~~------l---------------------~~~-~~~~~~~~~gH~~~~e~ 356 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDRIIPAAHA----QG------L---------------------PDG-VAVHVLPGAGHMPQMEA 356 (371)
T ss_pred HHhcCCCCEEEEEECCCCccCHHHH----hh------c---------------------cCC-CeEEEeCCCCCChhhhC
Confidence 3334478999999999999985432 11 1 123 67888999999999999
Q ss_pred hHHHHHHHHHHHCC
Q 026353 214 PSRALHLFSSFVHG 227 (240)
Q Consensus 214 P~~a~~~~~~fi~g 227 (240)
|+...+.+..|+.+
T Consensus 357 p~~~~~~i~~fl~~ 370 (371)
T PRK14875 357 AADVNRLLAEFLGK 370 (371)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999865
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.81 E-value=0.038 Score=50.39 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=52.2
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEc-CCCccCCCCChHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~-~AGHmvP~dqP~~ 216 (240)
-.+++||..|+.|.++|....++..+.+.. -. .. .+++.|. ++||+.+.++|++
T Consensus 308 I~~PtLvI~G~~D~~~p~~~~~~la~~i~~---a~---------------------~~-~~l~~i~~~~GH~~~le~p~~ 362 (379)
T PRK00175 308 IKARFLVVSFTSDWLFPPARSREIVDALLA---AG---------------------AD-VSYAEIDSPYGHDAFLLDDPR 362 (379)
T ss_pred CCCCEEEEEECCccccCHHHHHHHHHHHHh---cC---------------------CC-eEEEEeCCCCCchhHhcCHHH
Confidence 368999999999999999887776655421 00 11 4677786 9999999999999
Q ss_pred HHHHHHHHHCCC
Q 026353 217 ALHLFSSFVHGR 228 (240)
Q Consensus 217 a~~~~~~fi~g~ 228 (240)
..+.+.+|+...
T Consensus 363 ~~~~L~~FL~~~ 374 (379)
T PRK00175 363 YGRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHHhh
Confidence 999999999763
No 35
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.79 E-value=0.048 Score=40.50 Aligned_cols=65 Identities=28% Similarity=0.417 Sum_probs=52.4
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
..+||+.+|..|.+.|+.+.++..+.| ++ =..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 489999999999999999999987763 11 3588999999998864446667
Q ss_pred HHHHHHHCCCCCCC
Q 026353 219 HLFSSFVHGRRLPN 232 (240)
Q Consensus 219 ~~~~~fi~g~~~~~ 232 (240)
+++.+|+....+|.
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 88888888777764
No 36
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.69 E-value=0.05 Score=50.07 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=52.7
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcC-CCccCCCCChH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPS 215 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~ 215 (240)
.-..++||..|+.|.++|....++..+.+. +.. .+ .++..|.+ +||+++..+|+
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp---~~~---------------------~~-a~l~~I~s~~GH~~~le~p~ 375 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ---KQG---------------------KY-AEVYEIESINGHMAGVFDIH 375 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh---hcC---------------------CC-eEEEEECCCCCcchhhcCHH
Confidence 347899999999999999887776555431 000 12 67888985 99999999999
Q ss_pred HHHHHHHHHHCCC
Q 026353 216 RALHLFSSFVHGR 228 (240)
Q Consensus 216 ~a~~~~~~fi~g~ 228 (240)
.....+.+|+..+
T Consensus 376 ~~~~~I~~FL~~~ 388 (389)
T PRK06765 376 LFEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHHHccc
Confidence 9999999999753
No 37
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=95.66 E-value=0.036 Score=49.12 Aligned_cols=64 Identities=25% Similarity=0.302 Sum_probs=50.4
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH-
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR- 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~- 216 (240)
-.++|||..|+.|.++|....+++.+.+. . .+ -++..+.++||++..++|..
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~----~----------------------~~-~~l~~~~~a~H~~~~e~pd~~ 302 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAK----S----------------------ED-KTIKIYDGMMHSLLFGEPDEN 302 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhc----c----------------------CC-ceEEEcCCcEeeeecCCCHHH
Confidence 37899999999999999999888876531 1 11 46778899999999998854
Q ss_pred ---HHHHHHHHHCCC
Q 026353 217 ---ALHLFSSFVHGR 228 (240)
Q Consensus 217 ---a~~~~~~fi~g~ 228 (240)
....+.+||...
T Consensus 303 ~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 303 IEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHHHHHHHh
Confidence 566677888765
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=95.63 E-value=0.041 Score=49.06 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=51.0
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh---
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--- 214 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP--- 214 (240)
-.+++||..|+.|.+++..+++++.+.+...... ..+ ..++.+.||||++..++|
T Consensus 258 i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~---------------------~~~-~~l~~~~gagH~~~~E~~~~r 315 (330)
T PRK10749 258 ITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHP---------------------CEG-GKPLVIKGAYHEILFEKDAMR 315 (330)
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC---------------------CCC-ceEEEeCCCcchhhhCCcHHH
Confidence 3789999999999999999998887765311100 012 568889999999998887
Q ss_pred HHHHHHHHHHHCCC
Q 026353 215 SRALHLFSSFVHGR 228 (240)
Q Consensus 215 ~~a~~~~~~fi~g~ 228 (240)
+.++.-+..||...
T Consensus 316 ~~v~~~i~~fl~~~ 329 (330)
T PRK10749 316 SVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHHhhc
Confidence 44666667787653
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.45 E-value=0.033 Score=44.73 Aligned_cols=54 Identities=28% Similarity=0.504 Sum_probs=40.0
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
.-+++|++..|+.|.+++..-.+++.+. . .+ ..++.+.++||+++.++|++
T Consensus 174 ~~~~pvl~i~g~~D~~~~~~~~~~~~~~------~----------------------~~-~~~~~~~~~gH~~~~~~p~~ 224 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVPPESAEELADK------L----------------------PN-AELVVIPGAGHFLFLEQPDE 224 (228)
T ss_dssp GSSSEEEEEEETTSSSSHHHHHHHHHHH------S----------------------TT-EEEEEETTSSSTHHHHSHHH
T ss_pred ccCCCeEEeecCCCCCCCHHHHHHHHHH------C----------------------CC-CEEEEECCCCCccHHHCHHH
Confidence 3489999999999999993333333322 1 22 67889999999999999987
Q ss_pred HHH
Q 026353 217 ALH 219 (240)
Q Consensus 217 a~~ 219 (240)
..+
T Consensus 225 ~~~ 227 (228)
T PF12697_consen 225 VAE 227 (228)
T ss_dssp HHH
T ss_pred Hhc
Confidence 543
No 40
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=95.41 E-value=0.059 Score=48.30 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=50.9
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH-
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR- 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~- 216 (240)
-.+++||.+|+.|.++|....+.+.+.+ .. .+ -++..+.++||+...++|.+
T Consensus 278 i~~P~Lii~G~~D~vv~~~~~~~l~~~~----~~----------------------~~-~~l~~i~~~gH~l~~e~p~~~ 330 (349)
T PLN02385 278 VSLPLLILHGEADKVTDPSVSKFLYEKA----SS----------------------SD-KKLKLYEDAYHSILEGEPDEM 330 (349)
T ss_pred CCCCEEEEEeCCCCccChHHHHHHHHHc----CC----------------------CC-ceEEEeCCCeeecccCCChhh
Confidence 3789999999999999988887766542 10 12 56778999999999999987
Q ss_pred ---HHHHHHHHHCCC
Q 026353 217 ---ALHLFSSFVHGR 228 (240)
Q Consensus 217 ---a~~~~~~fi~g~ 228 (240)
++..+.+|+...
T Consensus 331 ~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 331 IFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHHHHHh
Confidence 778888898754
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=95.36 E-value=0.046 Score=50.41 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=43.5
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.++||+..|+.|.+++ ...+++.+.+ . .. ..++.|.+|||+++.++|....
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~------~---------------------~~-~~~~~i~~aGH~~~~E~P~~f~ 375 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRM------K---------------------VP-CEIIRVPQGGHFVFLDNPSGFH 375 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHc------C---------------------CC-CcEEEeCCCCCeeeccCHHHHH
Confidence 7899999999998776 3333333321 0 11 4578899999999999999977
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
+++.+|+.+
T Consensus 376 ~~l~~~~~~ 384 (402)
T PLN02894 376 SAVLYACRK 384 (402)
T ss_pred HHHHHHHHH
Confidence 777766653
No 42
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=95.33 E-value=0.056 Score=45.12 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=27.8
Q ss_pred EEEEEEcCCCccCCCCChHHHHHHHHHHHC
Q 026353 197 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 226 (240)
Q Consensus 197 Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~ 226 (240)
..+..|.++||+++.++|++..+.+..|+.
T Consensus 211 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 211 LPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred CeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 578889999999999999999999999985
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=95.10 E-value=0.069 Score=43.49 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=43.0
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
...++|+.+|..|..++- ..+.+. ... .+ .+++++.++||+++.++|+..
T Consensus 193 ~~~P~l~i~g~~D~~~~~-----~~~~~~--~~~----------------------~~-~~~~~~~~~gH~~~~e~~~~~ 242 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQ-----IAKEMQ--KLL----------------------PN-LTLVIIANAGHNIHLENPEAF 242 (251)
T ss_pred CCCceEEEeeCcchHHHH-----HHHHHH--hcC----------------------CC-CcEEEEcCCCCCcCccChHHH
Confidence 478999999999975431 111110 011 22 678889999999999999999
Q ss_pred HHHHHHHHC
Q 026353 218 LHLFSSFVH 226 (240)
Q Consensus 218 ~~~~~~fi~ 226 (240)
...+..|+.
T Consensus 243 ~~~i~~~l~ 251 (251)
T TIGR03695 243 AKILLAFLE 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999984
No 44
>PRK06489 hypothetical protein; Provisional
Probab=95.08 E-value=0.082 Score=47.70 Aligned_cols=62 Identities=11% Similarity=0.070 Sum_probs=47.2
Q ss_pred CCccEEEEecCCcccCCchhHH-HHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCC----CccCCCC
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSR-TLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGA----AHMVPYA 212 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~-~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~A----GHmvP~d 212 (240)
-..+|||..|+.|.++|....+ +++.+ .+ .+ -.++.|.+| ||++. +
T Consensus 291 I~~PvLvI~G~~D~~~p~~~~~~~~la~-----~i----------------------p~-a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 291 IKAPVLAINSADDERNPPETGVMEAALK-----RV----------------------KH-GRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred CCCCEEEEecCCCcccChhhHHHHHHHH-----hC----------------------cC-CeEEEECCCCCCCCcccc-c
Confidence 3789999999999999876542 33332 11 12 467889986 99885 8
Q ss_pred ChHHHHHHHHHHHCCC
Q 026353 213 QPSRALHLFSSFVHGR 228 (240)
Q Consensus 213 qP~~a~~~~~~fi~g~ 228 (240)
+|++..+.+.+|+...
T Consensus 342 ~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 342 SAKFWKAYLAEFLAQV 357 (360)
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999999643
No 45
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=94.13 E-value=0.13 Score=47.40 Aligned_cols=64 Identities=20% Similarity=0.231 Sum_probs=51.1
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCC-ChHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA-QPSR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~d-qP~~ 216 (240)
-.+++||.+|+.|.++|...++++.+++. .+ . -++..+.++||++..+ .|++
T Consensus 323 I~vPvLIi~G~~D~vvp~~~a~~l~~~~~--------~~-----------------~--k~l~~~~ga~H~l~~e~~~e~ 375 (395)
T PLN02652 323 VTVPFMVLHGTADRVTDPLASQDLYNEAA--------SR-----------------H--KDIKLYDGFLHDLLFEPEREE 375 (395)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhcC--------CC-----------------C--ceEEEECCCeEEeccCCCHHH
Confidence 37999999999999999999999887631 00 0 2345579999999776 7999
Q ss_pred HHHHHHHHHCCC
Q 026353 217 ALHLFSSFVHGR 228 (240)
Q Consensus 217 a~~~~~~fi~g~ 228 (240)
+++.+..||.+.
T Consensus 376 v~~~I~~FL~~~ 387 (395)
T PLN02652 376 VGRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=94.10 E-value=0.21 Score=44.68 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=49.3
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCC-hHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 217 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dq-P~~a 217 (240)
.+++|+.+|+.|.+++..+++.+.+++ .. .+ -++..+.+++|++..+. ++..
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~----~~----------------------~~-~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKL----SI----------------------SN-KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhc----cC----------------------CC-cEEEEECCCCCCCccCCCHHHH
Confidence 579999999999999999988877652 11 11 45667899999999875 6888
Q ss_pred HHHHHHHHCC
Q 026353 218 LHLFSSFVHG 227 (240)
Q Consensus 218 ~~~~~~fi~g 227 (240)
++-+..||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 8888889864
No 47
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.91 E-value=0.34 Score=39.96 Aligned_cols=63 Identities=19% Similarity=0.236 Sum_probs=44.7
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh-HH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP-SR 216 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP-~~ 216 (240)
...+|||.+|+.|.+||...++++.+.|... +. . ..+++++++||-....+. ..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~-----------------------~-~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GK-----------------------P-VELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TS-----------------------S-EEEEEETT-SSSTTSHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CC-----------------------C-EEEEEcCcCCCCCCCchhHHH
Confidence 4689999999999999999999999987511 11 1 789999999996554332 23
Q ss_pred HHHHHHHHH
Q 026353 217 ALHLFSSFV 225 (240)
Q Consensus 217 a~~~~~~fi 225 (240)
....+.+|+
T Consensus 198 ~~~~~~~f~ 206 (213)
T PF00326_consen 198 WYERILDFF 206 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444444
No 48
>PLN02511 hydrolase
Probab=93.57 E-value=0.075 Score=48.74 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=51.1
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
+-.+++||.+|+.|.++|.......+.. . ..+ ..++.+.++||+...++|..
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~~~-----~----------------------~p~-~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPREDIK-----A----------------------NPN-CLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhHHh-----c----------------------CCC-EEEEECCCcceeccccCCCC
Confidence 3478999999999999987543221111 0 133 78899999999999999865
Q ss_pred ------HHHHHHHHHCCCCCCCCCCCCC
Q 026353 217 ------ALHLFSSFVHGRRLPNNTRPAI 238 (240)
Q Consensus 217 ------a~~~~~~fi~g~~~~~~~~~~~ 238 (240)
+...+.+|+....-.....|++
T Consensus 348 ~~~~~w~~~~i~~Fl~~~~~~~~~~~~~ 375 (388)
T PLN02511 348 PFGAPWTDPVVMEFLEALEEGKSSTPAF 375 (388)
T ss_pred CCCCccHHHHHHHHHHHHHHhccccccc
Confidence 3667777776544444455655
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=93.28 E-value=0.17 Score=41.22 Aligned_cols=57 Identities=21% Similarity=0.364 Sum_probs=46.6
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
+..+++|+.+|..|.++|....+...+. + .+ -.++.+.++||.+..+.|.+
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~------~----------------------~~-~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKL------I----------------------PN-SQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHH------S----------------------TT-EEEEEETTCCSTHHHHSHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHh------c----------------------CC-CEEEECCCCChHHHhcCHHh
Confidence 3489999999999999999888874432 1 22 67888999999999999999
Q ss_pred HHHHHH
Q 026353 217 ALHLFS 222 (240)
Q Consensus 217 a~~~~~ 222 (240)
.-+++.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 888775
No 50
>PRK10566 esterase; Provisional
Probab=92.72 E-value=0.32 Score=40.90 Aligned_cols=61 Identities=30% Similarity=0.417 Sum_probs=45.0
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
..++|+.+|..|.++|...++++.+.+..+ +.. .+ +++.++.++||.+. | ..+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~~---------------------~~-~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GLD---------------------KN-LTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CCC---------------------cc-eEEEecCCCCCccC---H-HHH
Confidence 468999999999999999998887765311 110 12 88999999999874 3 355
Q ss_pred HHHHHHHC
Q 026353 219 HLFSSFVH 226 (240)
Q Consensus 219 ~~~~~fi~ 226 (240)
.-+.+||.
T Consensus 239 ~~~~~fl~ 246 (249)
T PRK10566 239 DAGVAFFR 246 (249)
T ss_pred HHHHHHHH
Confidence 66666765
No 51
>PRK11460 putative hydrolase; Provisional
Probab=92.58 E-value=0.45 Score=40.33 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
.+.+||+.+|..|.++|....++..+.|.-. + .+ .+|..+.++||.+..+.-+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHH
Confidence 4789999999999999999999888776311 1 12 678888999999976555655
Q ss_pred HHHHHHHH
Q 026353 218 LHLFSSFV 225 (240)
Q Consensus 218 ~~~~~~fi 225 (240)
...|..++
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 55555555
No 52
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=92.08 E-value=0.87 Score=40.13 Aligned_cols=68 Identities=21% Similarity=0.413 Sum_probs=50.1
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeC-CeEEEEEEcCCCccCC--CCChH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYG-NLLTFVTVRGAAHMVP--YAQPS 215 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~-~~Ltf~~V~~AGHmvP--~dqP~ 215 (240)
+.+|+||+|..|-++|+..+++.++++-- .| .+++|.++.+++|+.. ...|.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~-------------------------~G~a~V~~~~~~~~~H~~~~~~~~~~ 273 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCA-------------------------AGGADVEYVRYPGGGHLGAAFASAPD 273 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHH-------------------------cCCCCEEEEecCCCChhhhhhcCcHH
Confidence 57999999999999999999999887421 02 1289999999999965 45665
Q ss_pred HHHHHHHHHHCCCCCCC
Q 026353 216 RALHLFSSFVHGRRLPN 232 (240)
Q Consensus 216 ~a~~~~~~fi~g~~~~~ 232 (240)
+. .-|.+=+.|++.++
T Consensus 274 a~-~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 274 AL-AWLDDRFAGKPATS 289 (290)
T ss_pred HH-HHHHHHHCCCCCCC
Confidence 54 44455556776554
No 53
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=92.04 E-value=0.45 Score=51.64 Aligned_cols=77 Identities=16% Similarity=0.251 Sum_probs=50.8
Q ss_pred HHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh
Q 026353 135 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 214 (240)
Q Consensus 135 Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP 214 (240)
|-.-..++|+..|+.|.+++ ...++..+.+.. ... ...+ ..... ..++.|.+|||+++.++|
T Consensus 1564 L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~--a~~-------~~~~-------~~~~~-a~lvvI~~aGH~~~lE~P 1625 (1655)
T PLN02980 1564 LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGK--SKE-------SGND-------KGKEI-IEIVEIPNCGHAVHLENP 1625 (1655)
T ss_pred HhhCCCCEEEEEECCCCccH-HHHHHHHHHccc--ccc-------cccc-------ccccc-eEEEEECCCCCchHHHCH
Confidence 33347899999999999875 223333332210 000 0000 00122 578899999999999999
Q ss_pred HHHHHHHHHHHCCCC
Q 026353 215 SRALHLFSSFVHGRR 229 (240)
Q Consensus 215 ~~a~~~~~~fi~g~~ 229 (240)
++..+.+.+|+.+..
T Consensus 1626 e~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1626 LPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998754
No 54
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.94 E-value=0.7 Score=43.73 Aligned_cols=89 Identities=19% Similarity=0.309 Sum_probs=65.9
Q ss_pred cHHHHHHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCc
Q 026353 128 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 207 (240)
Q Consensus 128 ~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGH 207 (240)
.-+.|..+.++|=|+|+|+|-.|.+++..+|.++-+++.-.++-. .. .+..| +.|..|+|.||
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-~~---------~v~dF-------~RlF~vPGm~H 404 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-LA---------DVDDF-------YRLFMVPGMGH 404 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-cc---------cccce-------eEEEecCCCcc
Confidence 345667777889999999999999999999999999875332211 00 11122 77899999999
Q ss_pred cC--CCCChHHHHHHHHHHHCCCCCCCC
Q 026353 208 MV--PYAQPSRALHLFSSFVHGRRLPNN 233 (240)
Q Consensus 208 mv--P~dqP~~a~~~~~~fi~g~~~~~~ 233 (240)
-. |-..|..++..|.+|+.+.--|+.
T Consensus 405 C~gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 405 CGGGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred cCCCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 85 445677899999999987655543
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=91.36 E-value=0.27 Score=46.61 Aligned_cols=59 Identities=22% Similarity=0.223 Sum_probs=44.4
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.+++||.+|+.|.++|....+.+.+. . .+ ..++.+ .+||+++.+.|++..
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------~----------------------~~-~~~~~~-~~gH~~~~e~p~~~~ 282 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------V----------------------PR-LWRREI-KAGHWLPMSHPQVLA 282 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------C----------------------Cc-ceEEEc-cCCCcchhhChhHHH
Confidence 57899999999999996554433211 0 12 445555 479999999999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
..+..|+..
T Consensus 283 ~~i~~fl~~ 291 (582)
T PRK05855 283 AAVAEFVDA 291 (582)
T ss_pred HHHHHHHHh
Confidence 999999975
No 56
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=90.57 E-value=1.2 Score=40.40 Aligned_cols=71 Identities=20% Similarity=0.280 Sum_probs=49.7
Q ss_pred ccHHHHHHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCC
Q 026353 127 NILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAA 206 (240)
Q Consensus 127 ~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AG 206 (240)
+++.-+..| +..++|++..|+.|++--..|.+.. +.+ . . .. -..+.|.+||
T Consensus 292 Pm~~r~~~l-~~~~pv~fiyG~~dWmD~~~g~~~~-~~~------~-~-------------------~~-~~~~~v~~aG 342 (365)
T KOG4409|consen 292 PMIQRLREL-KKDVPVTFIYGDRDWMDKNAGLEVT-KSL------M-K-------------------EY-VEIIIVPGAG 342 (365)
T ss_pred hHHHHHHhh-ccCCCEEEEecCcccccchhHHHHH-HHh------h-c-------------------cc-ceEEEecCCC
Confidence 444444433 4479999999999988666655442 221 0 0 11 5688999999
Q ss_pred ccCCCCChHHHHHHHHHHHC
Q 026353 207 HMVPYAQPSRALHLFSSFVH 226 (240)
Q Consensus 207 HmvP~dqP~~a~~~~~~fi~ 226 (240)
|.|-.|+|+.=-+++..++.
T Consensus 343 HhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 343 HHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred ceeecCCHHHHHHHHHHHHh
Confidence 99999999988888777764
No 57
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.99 E-value=0.82 Score=38.03 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=40.8
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
+.+|++.+|+.|.++|....+...+.|. +.. .+ ++|.+..|.||-++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~---~~~---------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLK---AAG---------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHH---CTT----------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHH---hcC---------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 6789999999999999999888777653 111 12 88999999999986 4556
Q ss_pred HHHHHHHC
Q 026353 219 HLFSSFVH 226 (240)
Q Consensus 219 ~~~~~fi~ 226 (240)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666764
No 58
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=89.90 E-value=1.4 Score=38.63 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=33.3
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCC
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 210 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP 210 (240)
.+++||.+|+.|.+||....+++.+.+ .+ -.++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF----------------------------PE-AELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEECCCCCCCC
Confidence 589999999999999998766655431 12 46777899999974
No 59
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=88.67 E-value=1.5 Score=38.02 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=46.9
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccC-CC
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV-PY 211 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmv-P~ 211 (240)
+.|.+.+.++|+..|+.|... ..|.+.+. + ...|+.-. ...+ .+++++.+|||.+ +.
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~----~--~~~~~~~l----------~~~~-v~~~~~~~~~H~l~~e 258 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLTA-----QEFADSVL----G--EPAWRGAL----------EDPG-IERVEIDGADHTFSDR 258 (274)
T ss_pred HHHHhcCCcEEEEEcCcchhH-----HHHHHHhc----c--ChhhHHHh----------hcCC-eEEEecCCCCcccccH
Confidence 444455899999999999762 34443321 0 01111100 0134 8899999999998 56
Q ss_pred CChHHHHHHHHHHHC
Q 026353 212 AQPSRALHLFSSFVH 226 (240)
Q Consensus 212 dqP~~a~~~~~~fi~ 226 (240)
+.+++..+.+.+||.
T Consensus 259 ~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 259 VWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHHHHHHh
Confidence 667999999999984
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=87.72 E-value=1.8 Score=34.57 Aligned_cols=61 Identities=25% Similarity=0.432 Sum_probs=42.7
Q ss_pred hCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH
Q 026353 137 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 216 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 216 (240)
....++|+..|+.|.+.+......+.+.+ + + . ..++++.++||+...++|..
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~------~---------------~------~-~~~~~~~~~gH~~~~~~p~~ 270 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAAL------P---------------N------D-ARLVVIPGAGHFPHLEAPEA 270 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhC------C---------------C------C-ceEEEeCCCCCcchhhcHHH
Confidence 34699999999999555555423322221 0 0 2 67889999999999999997
Q ss_pred HHHHHHHHH
Q 026353 217 ALHLFSSFV 225 (240)
Q Consensus 217 a~~~~~~fi 225 (240)
..+.+..|+
T Consensus 271 ~~~~i~~~~ 279 (282)
T COG0596 271 FAAALLAFL 279 (282)
T ss_pred HHHHHHHHH
Confidence 776666644
No 61
>PLN02872 triacylglycerol lipase
Probab=87.46 E-value=2 Score=39.70 Aligned_cols=61 Identities=13% Similarity=0.322 Sum_probs=47.2
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCcc---CCCCChH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPS 215 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHm---vP~dqP~ 215 (240)
.++|+||.|..|.+++....+++++.+ . .. -.+..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~L------p-~~---------------------~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAEL------P-SK---------------------PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHC------C-Cc---------------------cEEEEcCCCCCHHHHhCcchHH
Confidence 579999999999999988888877753 1 00 134457899996 4558899
Q ss_pred HHHHHHHHHHCC
Q 026353 216 RALHLFSSFVHG 227 (240)
Q Consensus 216 ~a~~~~~~fi~g 227 (240)
..++.+..|+..
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=87.35 E-value=1.6 Score=32.95 Aligned_cols=48 Identities=29% Similarity=0.502 Sum_probs=35.2
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCcc
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM 208 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHm 208 (240)
..+-...++|++..|..|.+++....+++.+++. .+ -.++.|.|+||+
T Consensus 98 ~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---------------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---------------------------SS-EEEEEETTS-TT
T ss_pred hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---------------------------CC-cEEEEeCCCcCc
Confidence 3444567899999999999999888888777641 11 567889999995
No 63
>COG0400 Predicted esterase [General function prediction only]
Probab=86.96 E-value=2 Score=36.04 Aligned_cols=60 Identities=22% Similarity=0.314 Sum_probs=43.2
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
.+.+||+-+|..|.+||..-+++..+.|.- .+. + ..+.++. .||.++..-=+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~-~g~-----------------------~-v~~~~~~-~GH~i~~e~~~-- 196 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA-SGA-----------------------D-VEVRWHE-GGHEIPPEELE-- 196 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH-cCC-----------------------C-EEEEEec-CCCcCCHHHHH--
Confidence 489999999999999999999998887632 111 1 5566666 89999865444
Q ss_pred HHHHHHHHCC
Q 026353 218 LHLFSSFVHG 227 (240)
Q Consensus 218 ~~~~~~fi~g 227 (240)
.+++|+.+
T Consensus 197 --~~~~wl~~ 204 (207)
T COG0400 197 --AARSWLAN 204 (207)
T ss_pred --HHHHHHHh
Confidence 44446543
No 64
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=86.69 E-value=2.2 Score=36.87 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=46.0
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.+++|+..|..|.++|..-.+++++.+ . + -++++|. +||+....+|++..
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~------~----------------------~-~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRW------P----------------------P-SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhC------C----------------------c-cEEEEEC-CCCCccccCHHHHH
Confidence 579999999999999987766665541 1 1 2455675 89999999999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
.+|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999887643
No 65
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=85.58 E-value=0.71 Score=41.24 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=27.2
Q ss_pred EEEEEEcCCCccCCCCChHHHHHHHHHHHC
Q 026353 197 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 226 (240)
Q Consensus 197 Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~ 226 (240)
.-+..+.+|||+|..|+|+....++..|+.
T Consensus 282 ~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 282 VEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred hheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 667788889999999999999999999874
No 66
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=83.97 E-value=2.6 Score=37.69 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=45.0
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh---
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--- 214 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP--- 214 (240)
-..+||+..|..|.++|....+.+.+.+. . .. .++..+. +||+.+...|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--------~------------------~~-~~~~~~~-~gH~~~~~~~~~~ 336 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS--------S------------------ED-YTELSFP-GGHIGIYVSGKAQ 336 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC--------C------------------CC-eEEEEcC-CCCEEEEECchhH
Confidence 36899999999999999988887776531 0 11 4455554 8999988765
Q ss_pred HHHHHHHHHHHCC
Q 026353 215 SRALHLFSSFVHG 227 (240)
Q Consensus 215 ~~a~~~~~~fi~g 227 (240)
+.+..-+.+|+..
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 5667777788753
No 67
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=83.24 E-value=4.3 Score=39.68 Aligned_cols=59 Identities=19% Similarity=0.375 Sum_probs=45.2
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.-++||.+|..|..|+...++++.+.|.- .+. ...++.+++.||-++. |+...
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g~------------------------~~~~~~~p~e~H~~~~--~~~~~ 603 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGK------------------------PVELVVFPDEGHGFSR--PENRV 603 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHH-cCc------------------------eEEEEEeCCCCcCCCC--chhHH
Confidence 56899999999999999999999998742 121 1778899999999887 55444
Q ss_pred HHHHHH
Q 026353 219 HLFSSF 224 (240)
Q Consensus 219 ~~~~~f 224 (240)
.+++.+
T Consensus 604 ~~~~~~ 609 (620)
T COG1506 604 KVLKEI 609 (620)
T ss_pred HHHHHH
Confidence 444433
No 68
>PRK10985 putative hydrolase; Provisional
Probab=82.66 E-value=5 Score=35.54 Aligned_cols=51 Identities=12% Similarity=0.054 Sum_probs=36.0
Q ss_pred HHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCC
Q 026353 134 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 213 (240)
Q Consensus 134 ~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dq 213 (240)
.|-+-.+++|+.+|+.|.+++....+.. .++ ..+ +.++.+.++||+.+.+.
T Consensus 250 ~l~~i~~P~lii~g~~D~~~~~~~~~~~-~~~---------------------------~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 250 LLNQIRKPTLIIHAKDDPFMTHEVIPKP-ESL---------------------------PPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred HHhCCCCCEEEEecCCCCCCChhhChHH-HHh---------------------------CCC-eEEEECCCCCceeeCCC
Confidence 3333478999999999999986655432 221 023 78889999999988753
No 69
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=81.96 E-value=4.4 Score=35.80 Aligned_cols=65 Identities=17% Similarity=0.249 Sum_probs=51.3
Q ss_pred CCccEEEEecCCcccCC-chhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh--
Q 026353 138 NGIPVWVFSGDQDSVVP-LLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP-- 214 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~-~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP-- 214 (240)
..++|||.+|..|.++. ..+..++++++ +.+ + .+++.+.||.|.+-.+.+
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~----~~~----------------------~-~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERA----GSP----------------------D-KELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhc----CCC----------------------C-ceEEecCCcchhhhcCcchH
Confidence 37899999999999999 68888887762 332 1 578889999999987654
Q ss_pred -HHHHHHHHHHHCCCC
Q 026353 215 -SRALHLFSSFVHGRR 229 (240)
Q Consensus 215 -~~a~~~~~~fi~g~~ 229 (240)
+.+++.+..|+....
T Consensus 280 r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 280 REEVLKDILAWLAEAL 295 (298)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 578888888987643
No 70
>PRK13604 luxD acyl transferase; Provisional
Probab=81.42 E-value=7.6 Score=34.68 Aligned_cols=64 Identities=16% Similarity=0.230 Sum_probs=45.8
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCC
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 212 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~d 212 (240)
+.+-+-+.+||+.+|+.|.+||..++++..+++. + ++ -.+..+.||+|....
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~-------s-------------------~~-kkl~~i~Ga~H~l~~- 247 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR-------S-------------------EQ-CKLYSLIGSSHDLGE- 247 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc-------c-------------------CC-cEEEEeCCCccccCc-
Confidence 3333336899999999999999999999887631 0 12 678899999997654
Q ss_pred ChHHHHHHHHHH
Q 026353 213 QPSRALHLFSSF 224 (240)
Q Consensus 213 qP~~a~~~~~~f 224 (240)
.+.....+.+..
T Consensus 248 ~~~~~~~~~~~~ 259 (307)
T PRK13604 248 NLVVLRNFYQSV 259 (307)
T ss_pred chHHHHHHHHHH
Confidence 455555555444
No 71
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=77.13 E-value=3.5 Score=39.65 Aligned_cols=48 Identities=15% Similarity=0.294 Sum_probs=35.3
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 215 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~ 215 (240)
.+++|+..|..|.++|+..++...+.+ . + -....+.++||+++..+|.
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i------~----------------------~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALL------G----------------------G-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHC------C----------------------C-CEEEEECCCCCchHhhCCC
Confidence 578999999999999999888765542 1 0 1223577899998776664
No 72
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=75.75 E-value=5.5 Score=33.28 Aligned_cols=48 Identities=25% Similarity=0.448 Sum_probs=27.7
Q ss_pred CccEEEEecCCcccCCchhHHHHHH-HHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccC
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIR-ELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 209 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~-~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmv 209 (240)
+-+||+.+|..|.+-|..-.-+-+. +|. ..++. .+ ++.+.-.+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~-~~~~~---------------------~~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLK-AAGFP---------------------HN-VEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHH-CTT---------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHH-HhCCC---------------------Cc-ceEEEcCCCCcee
Confidence 6799999999999998877665443 332 11111 12 7888889999995
No 73
>PRK11071 esterase YqiA; Provisional
Probab=74.94 E-value=8.9 Score=31.31 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=42.6
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 217 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 217 (240)
...+|+|..|..|-++|+..+.+..++ .....+.||+|.- ...+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f--~~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAF--VGFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcch--hhHHHh
Confidence 356789999999999999998876552 2344679999987 344888
Q ss_pred HHHHHHHHC
Q 026353 218 LHLFSSFVH 226 (240)
Q Consensus 218 ~~~~~~fi~ 226 (240)
+..+..|+.
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 888888874
No 74
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.93 E-value=6.6 Score=34.09 Aligned_cols=60 Identities=22% Similarity=0.315 Sum_probs=43.8
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
..+|||++|..|-++|+.-..+..+.. +.+ .-..+|+||||--..--| .-+
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~--------k~~--------------------~epl~v~g~gH~~~~~~~-~yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERC--------KEK--------------------VEPLWVKGAGHNDIELYP-EYI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhc--------ccc--------------------CCCcEEecCCCcccccCH-HHH
Confidence 569999999999999999888866541 111 345679999998776444 456
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
..+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 666777654
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=68.89 E-value=12 Score=38.59 Aligned_cols=63 Identities=17% Similarity=0.167 Sum_probs=47.1
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEE-EEEcCCCccCC---CCCh
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTF-VTVRGAAHMVP---YAQP 214 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf-~~V~~AGHmvP---~dqP 214 (240)
..++|+..|..|.++|....+.+.+.+ . + ..+ ..+.++|||.+ ..-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i------~----------------------~-a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA------P----------------------N-AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC------C----------------------C-CeEEEEeCCCCCEeeeechhhh
Confidence 569999999999999999988876542 1 1 233 35688999954 4567
Q ss_pred HHHHHHHHHHHCCCCC
Q 026353 215 SRALHLFSSFVHGRRL 230 (240)
Q Consensus 215 ~~a~~~~~~fi~g~~~ 230 (240)
....-.+.+||...+=
T Consensus 348 ~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 348 QQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhChHHHHHHHHhcc
Confidence 7778889999986543
No 76
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=67.61 E-value=11 Score=30.45 Aligned_cols=43 Identities=23% Similarity=0.434 Sum_probs=33.1
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCC
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 211 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~ 211 (240)
.++.+++..+.|..||+.-++++.+.+. -.++.+.++||+-..
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l~------------------------------a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRLG------------------------------AELIILGGGGHFNAA 156 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHHT-------------------------------EEEEETS-TTSSGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHcC------------------------------CCeEECCCCCCcccc
Confidence 3566899999999999999999988751 467889999998754
No 77
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=67.52 E-value=18 Score=33.51 Aligned_cols=57 Identities=16% Similarity=0.159 Sum_probs=43.4
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
.++||+.+|..|.++|....+.+.+. .+ + ..++.+.++ |+ ..+|..++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~------~~----------------------~-~~l~~i~~~-~~--~e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASS------SA----------------------D-GKLLEIPFK-PV--YRNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHh------CC----------------------C-CeEEEccCC-Cc--cCCHHHHH
Confidence 57999999999999999999866543 11 1 346667776 33 35999999
Q ss_pred HHHHHHHCC
Q 026353 219 HLFSSFVHG 227 (240)
Q Consensus 219 ~~~~~fi~g 227 (240)
..+..||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999854
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=57.84 E-value=29 Score=30.12 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=35.4
Q ss_pred hCCccEEEEecCCcccCCch-hHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCC
Q 026353 137 QNGIPVWVFSGDQDSVVPLL-GSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 210 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~~~~~-g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP 210 (240)
..+.+||+.+|+.|.+|+.. .++.+.+.+.- .+ .+ .++....|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~-~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE-AG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH-cC-----------------------CC-eEEEEeCCCCccHH
Confidence 34789999999999999974 46666665421 11 12 78888999999654
No 79
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=57.34 E-value=4.6 Score=35.61 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=28.9
Q ss_pred EEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 197 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 197 Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
-|++.|.++|=||-.+||....+.|+-|+.|..+
T Consensus 248 ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 248 TTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp EEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ceEEEecccCCcccccCcHHHHHHHHHHHccCCc
Confidence 7899999999999999999999999999998764
No 80
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.71 E-value=30 Score=29.86 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=44.5
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 218 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 218 (240)
...|.++.|+.|.+|...-...|-+.. + +. +++-++.| |||-+..+.++.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t--~-------------------------~~-f~l~~fdG-gHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHT--K-------------------------GD-FTLRVFDG-GHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhh--c-------------------------CC-ceEEEecC-cceehhhhHHHHH
Confidence 578999999999999777666665431 0 12 56655555 9999999999999
Q ss_pred HHHHHHHC
Q 026353 219 HLFSSFVH 226 (240)
Q Consensus 219 ~~~~~fi~ 226 (240)
..+.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 88888875
No 81
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=55.40 E-value=40 Score=28.74 Aligned_cols=57 Identities=25% Similarity=0.430 Sum_probs=39.3
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh--HH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--SR 216 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP--~~ 216 (240)
.++-|=.-|+.|.++|..-++..++. |. + ..+..+-+||+||.-.| +.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~------~~----------------------~--a~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES------FK----------------------D--ATVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh------cC----------------------C--CeEEecCCCccCCCchHHHHH
Confidence 57788889999999999888877664 22 1 14567789999998765 33
Q ss_pred HHHHHHHHH
Q 026353 217 ALHLFSSFV 225 (240)
Q Consensus 217 a~~~~~~fi 225 (240)
..+.|..++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 334444443
No 82
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=54.79 E-value=15 Score=30.73 Aligned_cols=60 Identities=25% Similarity=0.350 Sum_probs=39.0
Q ss_pred HHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCCh
Q 026353 135 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 214 (240)
Q Consensus 135 Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP 214 (240)
|...-..+++..|+.|-++ .+...++|...- . +++++|.+|.|+-.-.-.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv------~l~~~l~~~~~~-----------------------~-~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVV------DLVAVLKWQESI-----------------------K-ITVITIPGADHFFHGKLI 194 (210)
T ss_pred ccCCCCCceeEecChhhhh------cHHHHHHhhcCC-----------------------C-CceEEecCCCceecccHH
Confidence 3444678999999999544 444555554331 1 789999999998765443
Q ss_pred HHHHHHHHHHH
Q 026353 215 SRALHLFSSFV 225 (240)
Q Consensus 215 ~~a~~~~~~fi 225 (240)
...+.+..|+
T Consensus 195 -~l~~~i~~~l 204 (210)
T COG2945 195 -ELRDTIADFL 204 (210)
T ss_pred -HHHHHHHHHh
Confidence 3444455555
No 83
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=48.53 E-value=21 Score=30.21 Aligned_cols=27 Identities=30% Similarity=0.492 Sum_probs=24.4
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIREL 165 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l 165 (240)
+++++||+|+.|..|+....++.++.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 689999999999999999998888764
No 84
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=48.39 E-value=15 Score=30.41 Aligned_cols=48 Identities=27% Similarity=0.332 Sum_probs=29.9
Q ss_pred CccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChH
Q 026353 139 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 215 (240)
Q Consensus 139 ~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~ 215 (240)
.+++|-..|..|.+++...++...+...- . +-+.....||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----------------------------~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP----------------------------D-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH----------------------------H-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC----------------------------C-cEEEEECCCCcCcCChhh
Confidence 78999999999999998888887765321 1 345567789999987664
No 85
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=47.61 E-value=66 Score=26.76 Aligned_cols=61 Identities=28% Similarity=0.482 Sum_probs=45.5
Q ss_pred ccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChH---H
Q 026353 140 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS---R 216 (240)
Q Consensus 140 irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~---~ 216 (240)
.++|+.+|..|.++|....+...+... . .. .....+.+++|....+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~--------~------------------~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR--------E------------------RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc--------c------------------CC-ceEEEecCCccccccCccHHHHH
Confidence 799999999999999988888776421 0 02 5677888899999976555 5
Q ss_pred HHHHHHHHHCC
Q 026353 217 ALHLFSSFVHG 227 (240)
Q Consensus 217 a~~~~~~fi~g 227 (240)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66667777643
No 86
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=47.56 E-value=35 Score=30.43 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=32.1
Q ss_pred EEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCCC
Q 026353 197 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLP 231 (240)
Q Consensus 197 Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~~ 231 (240)
-|++.|-++|-++..+||....+-|+-|+.|..+-
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~ 309 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYL 309 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCcc
Confidence 68999999999999999999999999999998753
No 87
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=43.46 E-value=8.1 Score=23.80 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=14.3
Q ss_pred hhhhccCcHHHHHhhCC
Q 026353 85 ERFFYLNLPEVQKALHA 101 (240)
Q Consensus 85 ~~~~ylN~~~V~~aLhv 101 (240)
.+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 35667999999999986
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=43.42 E-value=35 Score=27.93 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=25.8
Q ss_pred ccEEEEecCCcccCCchhHHHHHHHHHhccC
Q 026353 140 IPVWVFSGDQDSVVPLLGSRTLIRELARDLN 170 (240)
Q Consensus 140 irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~ 170 (240)
-+++|++|..|.+||....+...+.|..-.+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~ 199 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKVYG 199 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHhcC
Confidence 3468999999999999999999998864433
No 89
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=40.39 E-value=1.9e+02 Score=23.54 Aligned_cols=65 Identities=20% Similarity=0.222 Sum_probs=37.1
Q ss_pred HHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCcc--CC--
Q 026353 135 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM--VP-- 210 (240)
Q Consensus 135 Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHm--vP-- 210 (240)
..+.+.++|+..|..|..++....+...+.|. .-. .. +.+.+..|++|- .+
T Consensus 141 ~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~---~~~---------------------~~-~~~~~y~ga~HgF~~~~~ 195 (218)
T PF01738_consen 141 APKIKAPVLILFGENDPFFPPEEVEALEEALK---AAG---------------------VD-VEVHVYPGAGHGFANPSR 195 (218)
T ss_dssp GGG--S-EEEEEETT-TTS-HHHHHHHHHHHH---CTT---------------------TT-EEEEEETT--TTTTSTTS
T ss_pred hcccCCCEeecCccCCCCCChHHHHHHHHHHH---hcC---------------------Cc-EEEEECCCCcccccCCCC
Confidence 33457899999999999999999888877763 110 11 778888889994 22
Q ss_pred -CCChHHHHHHHHHH
Q 026353 211 -YAQPSRALHLFSSF 224 (240)
Q Consensus 211 -~dqP~~a~~~~~~f 224 (240)
.+.++++.+..++.
T Consensus 196 ~~~~~~aa~~a~~~~ 210 (218)
T PF01738_consen 196 PPYDPAAAEDAWQRT 210 (218)
T ss_dssp TT--HHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHH
Confidence 33455555544443
No 90
>PRK10115 protease 2; Provisional
Probab=37.54 E-value=72 Score=31.70 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=42.8
Q ss_pred Ccc-EEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEcCCCccCCCCChHH-
Q 026353 139 GIP-VWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR- 216 (240)
Q Consensus 139 ~ir-VLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~- 216 (240)
.++ +||.+|..|..||..-.++|+.+|.-. +- + .+-+-|.+-.++||.-...+-..
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~-~~----~-----------------~~~vl~~~~~~~GHg~~~~r~~~~ 662 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLREL-KT----D-----------------DHLLLLCTDMDSGHGGKSGRFKSY 662 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhc-CC----C-----------------CceEEEEecCCCCCCCCcCHHHHH
Confidence 578 678899999999999999999997411 11 0 11034444479999966554433
Q ss_pred -HHHHHHHHHC
Q 026353 217 -ALHLFSSFVH 226 (240)
Q Consensus 217 -a~~~~~~fi~ 226 (240)
...+.-.|+.
T Consensus 663 ~~~A~~~aFl~ 673 (686)
T PRK10115 663 EGVAMEYAFLI 673 (686)
T ss_pred HHHHHHHHHHH
Confidence 3334445544
No 91
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.78 E-value=1.6e+02 Score=26.38 Aligned_cols=68 Identities=21% Similarity=0.218 Sum_probs=35.9
Q ss_pred EEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEe-EEEEEeCC-eEEEEEEcCCCccCCCCChH
Q 026353 144 VFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVG-GWGTEYGN-LLTFVTVRGAAHMVPYAQPS 215 (240)
Q Consensus 144 iY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~-G~~~~~~~-~Ltf~~V~~AGHmvP~dqP~ 215 (240)
|-.|+.|..+|.....++.+.++ +.. ..+-..+-.+...+ -|....++ .+.+.+|.+.||-.|.-.+.
T Consensus 213 ~g~g~~~~~v~~~~~~~~Waa~n---g~~-~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~ 282 (312)
T COG3509 213 IGRGQRDGVVSAADLAARWAAVN---GCQ-AGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQY 282 (312)
T ss_pred cccccccccccHHHHHHHHHHhc---CCC-CCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcCCCCC
Confidence 56677777776555555555543 222 11222222111111 22222232 48999999999999974444
No 92
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=29.73 E-value=32 Score=24.64 Aligned_cols=11 Identities=36% Similarity=0.770 Sum_probs=10.0
Q ss_pred CccEEEEecCC
Q 026353 139 GIPVWVFSGDQ 149 (240)
Q Consensus 139 ~irVLiY~Gd~ 149 (240)
|+||+||.||.
T Consensus 40 gyrVhiyyGdS 50 (101)
T PF05414_consen 40 GYRVHIYYGDS 50 (101)
T ss_pred ccEEEEEecce
Confidence 99999999975
No 93
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=28.87 E-value=2.6e+02 Score=28.33 Aligned_cols=29 Identities=21% Similarity=0.006 Sum_probs=25.5
Q ss_pred CCccEEEEecCCcccCCchhHHHHHHHHH
Q 026353 138 NGIPVWVFSGDQDSVVPLLGSRTLIRELA 166 (240)
Q Consensus 138 ~~irVLiY~Gd~D~~~~~~g~~~~i~~l~ 166 (240)
-+++||+.+|-.|..++..++.++.+.|.
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 47999999999999999999988888763
No 94
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=25.98 E-value=91 Score=27.87 Aligned_cols=38 Identities=16% Similarity=0.290 Sum_probs=30.7
Q ss_pred CCeEEEEEEcCCCccCCCCChHHHHHHHHHHHCCCCCCC
Q 026353 194 GNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPN 232 (240)
Q Consensus 194 ~~~Ltf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~~~ 232 (240)
+. +.+......||.|..|.|...-..+-.|.....+..
T Consensus 294 Gk-~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~~~ 331 (343)
T KOG2564|consen 294 GK-FQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNRFAE 331 (343)
T ss_pred cc-eeeeeecccCceeccCCcchHHHHHHHHHhhhcccc
Confidence 44 889999999999999999888887777766555543
No 95
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=24.88 E-value=62 Score=30.05 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=28.5
Q ss_pred EEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 198 TFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 198 tf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
..+.|.|-||+ |.+|=+.--.+.++.-.|.||
T Consensus 257 VQvMVEGPGHv-Pl~~I~~nv~lqK~lc~~APf 288 (423)
T TIGR00190 257 VQCMVEGPGHV-PLDQIEANVRLQKELCDEAPF 288 (423)
T ss_pred CeEEEECCCCC-cHHHHHHHHHHHHHhhCCCCe
Confidence 36789999995 999999999999999999876
No 96
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=23.95 E-value=2.8e+02 Score=23.91 Aligned_cols=78 Identities=19% Similarity=0.225 Sum_probs=49.7
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHHHhccCCcccccccceeeCCEEeEEEEEeCCeEEEEEEc-CCCccCCC
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPY 211 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~~~~~w~~~~~v~G~~~~~~~~Ltf~~V~-~AGHmvP~ 211 (240)
..+-+-..+||+..|+.|-+||.....+|=+.+.- .+ .++-+++.+.+ .+.-.+. .+==..|.
T Consensus 158 ~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~-------~~--------~~~~~v~~f~g-~~HGf~~~r~~~~~Pe 221 (242)
T KOG3043|consen 158 ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKE-------NP--------AVGSQVKTFSG-VGHGFVARRANISSPE 221 (242)
T ss_pred hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhc-------Cc--------ccceeEEEcCC-ccchhhhhccCCCChh
Confidence 33434478999999999999999999888776521 11 13345566655 3333332 23333577
Q ss_pred CCh--HHHHHHHHHHHC
Q 026353 212 AQP--SRALHLFSSFVH 226 (240)
Q Consensus 212 dqP--~~a~~~~~~fi~ 226 (240)
|++ ++|++.+..|++
T Consensus 222 d~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 222 DKKAAEEAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 776 567777777764
No 97
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=23.63 E-value=69 Score=29.89 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=28.3
Q ss_pred EEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 198 TFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 198 tf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
..+.|.|-|| ||.+|=++.-.+.++.-.|.||
T Consensus 260 VQvMVEGPGH-vPl~~I~~nv~l~K~lc~~APf 291 (431)
T PRK13352 260 VQVMVEGPGH-VPLDQIEANVKLQKRLCHGAPF 291 (431)
T ss_pred CeEEEECCCC-CCHHHHHHHHHHHHHhhCCCCc
Confidence 3678999999 8999999999999999999876
No 98
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=23.27 E-value=1.9e+02 Score=28.71 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=28.6
Q ss_pred HHHHhCCccEEEEecCCcccCCchhHHHHHHHH
Q 026353 133 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 165 (240)
Q Consensus 133 ~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l 165 (240)
+.||+-+..||+..|..|..|.-..-|..-++|
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKM 330 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKM 330 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHh
Confidence 567888999999999999999988888877665
No 99
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=22.33 E-value=1.4e+02 Score=26.25 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=31.4
Q ss_pred cccccHHHHHHHHhCCccEEEEecCCcccCCchhHHHHHHH
Q 026353 124 SNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRE 164 (240)
Q Consensus 124 ~~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~ 164 (240)
..+.++.+++.|.+.|++|++.+|..+.. -..|.+|+++
T Consensus 146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~--r~aT~~NL~k 184 (275)
T TIGR01680 146 ALPETLKNYNKLVSLGFKIIFLSGRLKDK--QAVTEANLKK 184 (275)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHHHHH
Confidence 35788999999999999999999997744 3447777776
No 100
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.93 E-value=83 Score=26.72 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=18.5
Q ss_pred EEEEEeCCeEEEEEEcCCCccCCCCC
Q 026353 188 GWGTEYGNLLTFVTVRGAAHMVPYAQ 213 (240)
Q Consensus 188 G~~~~~~~~Ltf~~V~~AGHmvP~dq 213 (240)
|.++.... -+|+.|.||||..|.+.
T Consensus 258 ~~v~glkt-~~~lev~ga~~ylp~ya 282 (310)
T COG4569 258 GQVSGLKT-AVWLEVEGAAHYLPAYA 282 (310)
T ss_pred eeeeccce-EEEEEEecccccCcccc
Confidence 34443344 78999999999999765
No 101
>PF01964 ThiC: ThiC family; InterPro: IPR002817 ThiC is found within the thiamin biosynthesis operon. ThiC is involved in thiamin biosynthesis []. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis.; GO: 0009228 thiamine biosynthetic process; PDB: 3EPO_A 3EPN_B 3EPM_B.
Probab=21.40 E-value=59 Score=30.21 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCCCCChHHHHHHHHHHHCCCCC
Q 026353 198 TFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 230 (240)
Q Consensus 198 tf~~V~~AGHmvP~dqP~~a~~~~~~fi~g~~~ 230 (240)
..+.|.|-|| ||.+|=++.-.+.++.-.|.||
T Consensus 256 VQvMVEGPGH-VPl~~I~~nv~lqK~lc~~APf 287 (420)
T PF01964_consen 256 VQVMVEGPGH-VPLNQIEANVKLQKRLCHGAPF 287 (420)
T ss_dssp --EEEEE-SB---GGGHHHHHHHHHHHTTT--E
T ss_pred CeEEeeCCCC-CCHHHHHHHHHHHHHhcCCCCc
Confidence 3567999999 8999999999999999999875
No 102
>smart00581 PSP proline-rich domain in spliceosome associated proteins.
Probab=21.35 E-value=71 Score=20.91 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=13.0
Q ss_pred cHHHHHhhCCCCCCCCCcc
Q 026353 92 LPEVQKALHANRTNLPYGW 110 (240)
Q Consensus 92 ~~~V~~aLhv~~~~~~~~w 110 (240)
+.+.|+|||+.....+ .|
T Consensus 10 S~~LR~ALG~~~~~pP-PW 27 (54)
T smart00581 10 SDELREALGLPPGQPP-PW 27 (54)
T ss_pred CHHHHHHcCCCCCCCC-hH
Confidence 5689999999864333 45
No 103
>PF02739 5_3_exonuc_N: 5'-3' exonuclease, N-terminal resolvase-like domain; InterPro: IPR020046 The N-terminal and internal 5'3'-exonuclease domains are commonly found together, and are most often associated with 5' to 3' nuclease activities. The XPG protein signatures (PDOC00658 from PROSITEDOC) are never found outside the '53EXO' domains. The latter are found in more diverse proteins [, , ]. The number of amino acids that separate the two 53EXO domains, and the presence of accompanying motifs allow the diagnosis of several protein families. In the eubacterial type A DNA-polymerases, the N-terminal and internal domains are separated by a few amino acids, usually four. The pattern DNA_POLYMERASE_A (IPR001098 from INTERPRO) is always present towards the C terminus. Several eukaryotic structure-dependent endonucleases and exonucleases have the 53EXO domains separated by 24 to 27 amino acids, and the XPG protein signatures are always present. In several proteins from herpesviridae, the two 53EXO domains are separated by 50 to 120 amino acids. These proteins are implicated in the inhibition of the expression of the host genes. Eukaryotic DNA repair proteins with 600 to 700 amino acids between the 53_EXO domains all carry the XPG protein signatures. This entry represents the N-terminal resolvase-like domain, which has a 3-layer alpha/beta/alpha core structure and contains an alpha-helical arch [, ].; GO: 0003677 DNA binding, 0008409 5'-3' exonuclease activity; PDB: 1TAQ_A 1BGX_T 1TAU_A 1XO1_B 1EXN_A 1UT8_A 1UT5_B 3H7I_A 3H8J_A 3H8S_A ....
Probab=20.82 E-value=95 Score=24.98 Aligned_cols=16 Identities=38% Similarity=0.706 Sum_probs=12.7
Q ss_pred hCCccEEEEecCCccc
Q 026353 137 QNGIPVWVFSGDQDSV 152 (240)
Q Consensus 137 ~~~irVLiY~Gd~D~~ 152 (240)
+.|.+|+|++||.|+.
T Consensus 123 ~~~~~v~IvS~DkD~~ 138 (169)
T PF02739_consen 123 EEGFEVIIVSGDKDLL 138 (169)
T ss_dssp HTTCEEEEE-SSGGGG
T ss_pred cCCCEEEEEcCCCCHH
Confidence 4589999999999964
No 104
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=20.51 E-value=1.3e+02 Score=25.45 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=32.9
Q ss_pred ccccHHHHHHHHhCCccEEEEecCCcccCCchhHHHHHHHH
Q 026353 125 NINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 165 (240)
Q Consensus 125 ~~~~~~~~~~Ll~~~irVLiY~Gd~D~~~~~~g~~~~i~~l 165 (240)
.+.++.++..+.+.|++|++.+|..+. --..|++++++.
T Consensus 117 ip~a~~l~~~~~~~G~~V~~iT~R~~~--~r~~T~~nL~~~ 155 (229)
T PF03767_consen 117 IPGALELYNYARSRGVKVFFITGRPES--QREATEKNLKKA 155 (229)
T ss_dssp ETTHHHHHHHHHHTTEEEEEEEEEETT--CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCCch--hHHHHHHHHHHc
Confidence 467889999999999999999998887 556778888774
No 105
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=20.50 E-value=1e+02 Score=24.63 Aligned_cols=26 Identities=23% Similarity=0.436 Sum_probs=22.4
Q ss_pred ccccHHHHHHHHhCCccEEEEecCCc
Q 026353 125 NINILPVLKRIIQNGIPVWVFSGDQD 150 (240)
Q Consensus 125 ~~~~~~~~~~Ll~~~irVLiY~Gd~D 150 (240)
...+...++.|-+.|+++.|.+||..
T Consensus 129 ~~~~~~~l~~L~~~Gi~~~i~TGD~~ 154 (215)
T PF00702_consen 129 RPGAKEALQELKEAGIKVAILTGDNE 154 (215)
T ss_dssp HTTHHHHHHHHHHTTEEEEEEESSEH
T ss_pred hhhhhhhhhhhhccCcceeeeecccc
Confidence 35678899999999999999999965
Done!