BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026365
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38
PE=2 SV=1
Length = 247
Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 26/256 (10%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
MSCNGCRVLRKGCSE+CILRPC+QWIESPE+QGHATVFVAKFFGRAGLMSFISAVPESQ
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG-- 118
PALFQSLLYEACGRTVNPVNGAVGLLWTGNW+VCQAAVETVLRGG+L+P+PELLN G
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120
Query: 119 GSPTPTSDEVSEAEVTCTDMSRLQ------DRSFPSSHCRFSSSRSK----VSPAKRKRV 168
G P+PTSDE SE CT+M L+ DR+ HCRFSSSRS+ SP KRKR+
Sbjct: 121 GFPSPTSDEASE---ICTEMLNLRKADDSGDRNI-YHHCRFSSSRSRSRSTASPPKRKRL 176
Query: 169 EESAMKLQQSDLDLRLTPRFTGKVPPEVRRRPGTPSMNSEESGTTTCFESGLTDHRYL-- 226
S+ + S+LDL L P + K P + TPSM SEES TT F++ RY+
Sbjct: 177 --SSEQQPSSELDLSLIPIYPIKTLP---FKEDTPSMYSEESVTTVSFQNNNAGDRYVRC 231
Query: 227 ---NGAEERKLLNLFV 239
G KLLNLF
Sbjct: 232 GGGGGGATTKLLNLFA 247
>sp|Q9FN11|LBD37_ARATH LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37
PE=2 SV=1
Length = 250
Score = 276 bits (706), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/255 (63%), Positives = 183/255 (71%), Gaps = 21/255 (8%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
MSCNGCRVLRKGCSE+CILRPC+QWIE+ ++QGHATVFVAKFFGRAGLMSFISAVP+SQR
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG-- 118
PALFQSLLYEACGRTVNPVNGA+G+LWTGNW++CQAAVETVLRGG+LRP+PELL G
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120
Query: 119 -GSPTPTSDEVSEAEVTCTDMSRLQ-----DRSF----PSSHCRFSSSRSKVSPAKRKRV 168
G P+PTS+E SE CT+M LQ DR+ S R S+ SP KRKR+
Sbjct: 121 AGFPSPTSEEASE---ICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRL 177
Query: 169 EESAMKLQQSDLDLRLTPRFTGK--VPPEVRRRPGTPSMNSEESGTTTCFES--GLTDHR 224
S+ S+LDL L P F K P RRR TPSMNSE+SGTTT + D
Sbjct: 178 --SSEDQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVY 235
Query: 225 YLNGAEERKLLNLFV 239
G E KLLNLFV
Sbjct: 236 GNGGGETTKLLNLFV 250
>sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39
PE=2 SV=1
Length = 240
Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 182/258 (70%), Gaps = 37/258 (14%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
MSCNGCRVLRKGCSE+CILRPCLQWIES ESQGHATVFVAKFFGRAGLMSFIS+VPE QR
Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGS 120
PALFQSLL+EACGRTVNPVNGAVG+LWT NWHVCQAAVETVLRGGTLRP+ +LL S S
Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLES--PS 118
Query: 121 PTPTSDEVSEAEVTCTDMSRLQDRSFPSSHCRFSSSRS----KVSPAKRKRVEESAMKLQ 176
+ DE S E+ D+SR Q + HCRFS+SRS K S RKR++
Sbjct: 119 LMISCDESS--EIWHQDVSRNQ-----THHCRFSTSRSTTEMKDSLVNRKRLK------S 165
Query: 177 QSDLDLRLTPRFTGKVPP------------EVRR--RPGTPSMNSEESGTTTCFESGLT- 221
SDLDL++ T P +V + RPG+P SEES TT+C+E+G+
Sbjct: 166 DSDLDLQVNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSP---SEESVTTSCWENGMRG 222
Query: 222 DHRYLNGAEERKLLNLFV 239
D++ E+KLLNLFV
Sbjct: 223 DNKQKRNKGEKKLLNLFV 240
>sp|Q9ZW96|LBD40_ARATH LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40
PE=2 SV=1
Length = 233
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 96/110 (87%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
MSCNGCRVLRKGCSE+C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ ++ P+ R
Sbjct: 3 MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPV 110
PA+F+SLLYEACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG + P+
Sbjct: 63 PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112
>sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41
PE=2 SV=1
Length = 263
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 95/121 (78%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
MSCNGCRVLRKGCSE C +RPCL WI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P R
Sbjct: 3 MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGS 120
P +F+SLL+EACGR VNP+ G+VGLLW+GNW +CQ AVE V++G ++ + + G
Sbjct: 63 PGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQG 122
Query: 121 P 121
P
Sbjct: 123 P 123
>sp|Q9CA30|LBD42_ARATH LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42
PE=2 SV=1
Length = 233
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 92/111 (82%)
Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60
+SCNGCRVLRKGC++ C +RPCLQWI+S +SQ +AT+F+AKF+GRAGL++ I + P+ R
Sbjct: 3 ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVP 111
PA+F+SLLYEACGR VNPV+G+VGL+W+GNW CQAAV+ VL G + P
Sbjct: 63 PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTP 113
>sp|Q9LQR0|LBD1_ARATH LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1
PE=2 SV=1
Length = 190
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C+E C+L P P + + FG + ++ F+ +PESQR
Sbjct: 34 CAACKILRRRCAERCVLAPYF-----PPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 88
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLWTGNWHV-------CQAAVETVLRGGTLRPVPELLN 115
S++YEA R +PV G G ++ V +A VE V + EL+
Sbjct: 89 AVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIY 148
Query: 116 SCGGSPTPTSDEVSEAEVTCTDMSRLQDRS 145
+ D +S D+ L+D+S
Sbjct: 149 NMDQQQKQEQDNMS---FESNDLGFLEDKS 175
>sp|Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11
PE=2 SV=2
Length = 232
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C++ C+L P P + + FG + ++ F+ +PESQR
Sbjct: 56 CAACKILRRRCADKCVLAPYF-----PPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 110
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLW 87
S++YEA R +PV G G ++
Sbjct: 111 AVNSMVYEAGARMRDPVYGCAGAIY 135
>sp|O64836|LBD10_ARATH LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10
PE=2 SV=1
Length = 311
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C++ C+ P P + +FV + FG + + ++ +P QR
Sbjct: 6 CAACKLLRRKCTQECVFAPYF-----PPTNPQKFIFVHRVFGASNVTKILNDLPPDQRED 60
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +P+ G VGL+
Sbjct: 61 TVNSLFYEAEARIRDPIYGCVGLI 84
>sp|Q9FKZ3|LBD36_ARATH LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36
PE=2 SV=1
Length = 313
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C++ C+ P P Q FV K FG + + ++ + +QR
Sbjct: 8 CAACKFLRRKCTQECVFAPYF-----PPDQPQKFAFVHKVFGASNVAKLLNELASNQRED 62
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VGL+
Sbjct: 63 AVNSLFYEAEARLRDPVYGCVGLI 86
>sp|O81322|LBD31_ARATH LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31
PE=2 SV=2
Length = 220
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P + +S E H T V K FG + + +P S+R
Sbjct: 12 CGACKFLRRKCVADCVFAP---YFDSVEGTSHFTA-VHKVFGASNASKLLMMIPASRRLD 67
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPT 122
+L YEA R +PV G VG ++ V E L V L++ G P
Sbjct: 68 AVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAE-------LAYVQTQLSTLQGLPP 120
Query: 123 PTSDEVSEAE 132
P S S E
Sbjct: 121 PNSQNNSRTE 130
>sp|Q8LBW3|LBD12_ARATH LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12
PE=2 SV=2
Length = 193
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C++ CI P P H V K FG + + + +P QR
Sbjct: 9 CASCKLLRRRCAKDCIFAPYF-----PPDDPHKFAIVHKVFGASNVSKMLQELPVHQRAD 63
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL++EA R +PV G VG +
Sbjct: 64 AVNSLVFEANARVRDPVYGCVGAI 87
>sp|Q8L5T5|LBD15_ARATH LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15
PE=2 SV=2
Length = 224
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C++ C P SP + H V K FG + + + VPESQR
Sbjct: 46 CAACKLLRRRCAQECPFSPYF----SPH-EPHKFASVHKVFGASNVSKMLMEVPESQRAD 100
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL+YEA R +PV G +G +
Sbjct: 101 AANSLVYEANVRLRDPVYGCMGAI 124
>sp|Q9LHS8|LBD33_ARATH LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33
PE=2 SV=1
Length = 177
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
SC C+ LR+ C+ C+ P + E S A V K FG + + + +P+ QR
Sbjct: 7 SCGACKFLRRKCNRDCVFSPYFSY-EQASSHFAA---VHKVFGASNVSKHLLHLPQHQRN 62
Query: 62 ALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVC--QAAVETV-----------LRGGTLR 108
++ YEA R +PV G V ++ + V Q +E + G L
Sbjct: 63 IAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQLN 122
Query: 109 PVPELLNSCGGSPTPTSDE 127
+PE +N + T DE
Sbjct: 123 NIPEFVNQMTMATTNFVDE 141
>sp|Q9AT61|LBD13_ARATH LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13
PE=2 SV=2
Length = 268
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C+E C P SP + H V K FG + + + V ESQR
Sbjct: 53 CAACKLLRRRCAEECPFSPYF----SPH-EPHKFAAVHKVFGASNVSKMLLEVGESQRGD 107
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVE-TVLRGGTLR 108
SL+YEA R +P+ G +G + H+ E T +R LR
Sbjct: 108 AANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILR 154
>sp|Q9SA51|LBD3_ARATH LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3
PE=2 SV=1
Length = 165
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 3 CNGCRVLRKGC-SESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
C GC++LR+ C +SC+ P P + + V K FG + + + + E+ R
Sbjct: 15 CAGCKLLRRKCVKDSCVFAPYF-----PAKEPYKFAIVHKIFGASNVNKMLQELSENHRS 69
Query: 62 ALFQSLLYEACGRTVNPVNGAVGLL 86
S++YEA R +PV G VG +
Sbjct: 70 DAVDSMVYEANARIQDPVYGCVGTI 94
>sp|Q9SJW5|LBD14_ARATH LOB domain-containing protein 14 OS=Arabidopsis thaliana GN=LBD14
PE=2 SV=1
Length = 188
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C GC+ LR+ C E C+ P + E + + K FG + IS +P+ R
Sbjct: 8 CGGCKFLRRKCVEGCVFAPYFCYEEGSSN----FAAIHKVFGASNFSKLISHLPDHDRCD 63
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVL 102
+++ YEA R +P+ G V +++ V + VL
Sbjct: 64 AVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVL 103
>sp|Q9SRL8|LBD21_ARATH LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21
PE=2 SV=1
Length = 165
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
SC C++L++ C+ +CI P + S + A V K FG + + + VPE QR
Sbjct: 11 SCAACKLLKRRCTPTCIFAP---YFRSSDLITFAKVH--KVFGASNVSKLLGEVPEEQRQ 65
Query: 62 ALFQSLLYEACGRTVNPVNGAVGLLWT 88
SL YEA R +PV G +G + +
Sbjct: 66 ETVNSLAYEAEVRLKDPVYGCIGAIAS 92
>sp|Q9SHE9|LBD4_ARATH LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4
PE=2 SV=1
Length = 172
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C++LR+ C++ C+ P + + E Q A V + FG + + + +P QR
Sbjct: 14 CAACKLLRRRCAQDCVFSP---YFPADEPQKFANVH--RVFGASNVNKMLQELPIHQRGD 68
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
S++YEA R +PV G VG +
Sbjct: 69 AVSSMVYEANARVRDPVYGCVGAI 92
>sp|Q9SCS4|LBD28_ARATH LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28
PE=2 SV=1
Length = 198
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C+E C+ P P ++ V K FG + + + I+++ QR
Sbjct: 13 CAACKHLRRKCTEDCVFAPYF-----PSTKLDNYEAVHKVFGASHVATLINSLHPCQREF 67
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLWT 88
+L +EA + +PVNG +G+++
Sbjct: 68 AMDTLAWEAQVQANDPVNGCLGIIYN 93
>sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB
PE=2 SV=1
Length = 186
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C CI P P + H V K FG + + ++ + QR
Sbjct: 12 CAACKFLRRKCMPGCIFAPYF-----PPEEPHKFANVHKIFGASNVTKLLNELLPHQRED 66
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VG +
Sbjct: 67 AVNSLAYEAEARVRDPVYGCVGAI 90
>sp|O04479|LBD6_ARATH LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6
PE=1 SV=1
Length = 199
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P P Q V K FG + + ++ + SQR
Sbjct: 10 CAACKFLRRKCQPECVFAPYF-----PPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VG++
Sbjct: 65 AVNSLAYEADMRLRDPVYGCVGVI 88
>sp|Q9SSM9|LBD7_ARATH LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7
PE=2 SV=1
Length = 214
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
+C C+ RK C ++CIL P+ + + K FG + + + + ESQR
Sbjct: 13 ACAACKHQRKKCKKNCILARYF-----PQDGTNKFLNAHKLFGVSNITKMLKRIEESQRD 67
Query: 62 ALFQSLLYEACGRTVNPVNGA 82
++L+Y A R ++PV G
Sbjct: 68 IAMENLIYHANARALDPVGGV 88
>sp|O81323|LBD30_ARATH LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30
PE=2 SV=1
Length = 228
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 GCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALF 64
C+ LR+ C CI P + +S + H V K FG + + + VPE +RP
Sbjct: 20 ACKFLRRKCVAGCIFAP---YFDSEQGAAHFAA-VHKVFGASNVSKLLHHVPEHKRPDAV 75
Query: 65 QSLLYEACGRTVNPVNGAV 83
S+ +EA R +P+ G V
Sbjct: 76 VSICFEAQARLRDPIYGCV 94
>sp|Q9LNB9|LBD2_ARATH LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2
PE=2 SV=2
Length = 206
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
+C C+ RK C+ CIL P ++ E Q V K FG + + + V E R
Sbjct: 24 ACASCKHQRKKCNNECILSPYFPARKTKEFQA-----VHKVFGVSNVQKMVRTVREEDRT 78
Query: 62 ALFQSLLYEACGRTVNPVNGAVG 84
L SL +EA R +PV G+ G
Sbjct: 79 KLSDSLTWEALWRQKDPVLGSYG 101
>sp|Q9LRW1|LBD22_ARATH LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22
PE=2 SV=1
Length = 268
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
+C C+ R+ C+ C+L P P + + K FG + + I ++ ++
Sbjct: 36 ACAACKYQRRKCAPDCLLAPYF-----PHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKD 90
Query: 62 ALFQSLLYEACGRTVNPVNGAVGLLWTGNWHV--CQAAVETVLR 103
A ++++++ R +PV+G G++ + + + +E VL+
Sbjct: 91 AAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQ 134
>sp|Q8L8Q3|LBD25_ARATH LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25
PE=2 SV=3
Length = 159
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C+ C+ P P + V + FG + + + V QR
Sbjct: 40 CAACKFLRRKCTSDCVFAPYF-----PPEEPTKFANVHRIFGASNVSKILHEVAPHQRED 94
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VG +
Sbjct: 95 AVNSLAYEAEARLKDPVYGCVGAI 118
>sp|P59468|LBD24_ARATH LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24
PE=2 SV=1
Length = 121
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C + C+ P P + V + +G + + +P+ R
Sbjct: 6 CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
+SL +EA R +PV G VG++
Sbjct: 61 AVESLCFEAKCRVDDPVYGCVGII 84
>sp|P59467|LBD23_ARATH LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23
PE=2 SV=1
Length = 121
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C + C+ P P + V + +G + + +P+ R
Sbjct: 6 CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
+SL +EA R +PV G VG++
Sbjct: 61 AVESLCFEAKCRVDDPVYGCVGII 84
>sp|Q9STS6|LBD27_ARATH LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27
PE=2 SV=1
Length = 328
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 2 SCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRP 61
+C C+ R+ C+ C L P P Q V + FG ++ + + E+Q+P
Sbjct: 36 ACAACKYQRRRCAADCPLAPYF-----PAEQPKLFQNVHRLFGVRSIVKILEKLDETQKP 90
Query: 62 ALFQSLLYEACGRTVNPVNGAVGL 85
+S+++++ R +PV+G +G+
Sbjct: 91 EAMKSIIFQSYVRDRSPVHGCLGV 114
>sp|A1YKY7|IAL1_MAIZE Protein IAL1 OS=Zea mays PE=2 SV=1
Length = 269
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P P V V + FG + + ++ + QR
Sbjct: 34 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVRVHRVFGASNVTKLMNEIHPLQRED 88
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VG++
Sbjct: 89 AMNSLAYEADMRIRDPVYGCVGVI 112
>sp|Q32SG3|LBD6_MAIZE LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1
Length = 260
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P P V V + FG + + ++ + QR
Sbjct: 34 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPFQRED 88
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G VG++
Sbjct: 89 AVNSLAYEADMRLRDPVYGCVGVI 112
>sp|Q9SRV3|LBD20_ARATH LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20
PE=2 SV=1
Length = 273
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHAT-VFVAKFFGRAGLMSFISAVPESQRP 61
C C+ LR+ C CI P QG A V K FG + + + +P ++R
Sbjct: 52 CGACKFLRRKCVSGCIFAPHF-----GSDQGAARFAAVHKVFGASNVSKLLHHIPVNRRH 106
Query: 62 ALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVE 99
++ YEA R +PV G V + V E
Sbjct: 107 DAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAE 144
>sp|Q9M2J7|LBD29_ARATH LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29
PE=2 SV=1
Length = 218
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVA--KFFGRAGLMSFISAVPESQR 60
C C+ LR+ C++ C+ P QG A+ F A K FG + +S +P S R
Sbjct: 12 CGACKFLRRKCAKGCVFAPYF-----CHEQG-ASHFAAIHKVFGASNASKLLSHLPISDR 65
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLW 87
++ YEA R +P+ G V ++
Sbjct: 66 CEAAITISYEAQARLQDPIYGCVSHIF 92
>sp|O22132|LBD19_ARATH LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19
PE=2 SV=1
Length = 191
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 5 GCRVLRKGCSESCILRPCLQWIESPESQGHA-TVFVAKFFGRAGLMSFISAVPESQRPAL 63
C+ LR+ C + C+ P QG A V K FG + + +P +R
Sbjct: 19 ACKFLRRKCVKGCVFAPYFD-----AEQGTARFAAVHKVFGASNASKMLLRLPLHKRLDA 73
Query: 64 FQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVE 99
+L YEA R +PV G+VG L++ V E
Sbjct: 74 VVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAE 109
>sp|Q9SLB7|LBD16_ARATH LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16
PE=2 SV=1
Length = 245
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C+ CI P S E + K FG + + + VP R
Sbjct: 16 CGACKFLRRKCASDCIFAPYF----SSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCE 71
Query: 63 LFQSLLYEACGRTVNPVNGAVGLLW 87
++ YEA R +PV G V ++
Sbjct: 72 AVVTIAYEAQARLHDPVYGCVSHIF 96
>sp|Q8LQH4|LBD6_ORYSJ LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica
GN=LBD6 PE=2 SV=1
Length = 269
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P P V V + FG + + ++ + QR
Sbjct: 39 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPYQRED 93
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G V ++
Sbjct: 94 AVNSLAYEADMRLRDPVYGCVAII 117
>sp|A2WXT0|LBD6_ORYSI LOB domain-containing protein 6 OS=Oryza sativa subsp. indica
GN=LBD6 PE=3 SV=1
Length = 269
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C C+ LR+ C C+ P P V V + FG + + ++ + QR
Sbjct: 39 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPYQRED 93
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
SL YEA R +PV G V ++
Sbjct: 94 AVNSLAYEADMRLRDPVYGCVAII 117
>sp|O22131|LBD18_ARATH LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18
PE=2 SV=2
Length = 262
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 5 GCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALF 64
C+ LR+ C CI P + +S + + V K FG + + + +P +R
Sbjct: 40 ACKFLRRKCVPGCIFAP---YFDSEQGSAYFAA-VHKVFGASNVSKLLLHIPVHRRSDAV 95
Query: 65 QSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVET 100
++ YEA R +P+ G V ++ V E
Sbjct: 96 VTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEV 131
>sp|Q9SLB6|LBD17_ARATH LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17
PE=2 SV=1
Length = 244
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVA--KFFGRAGLMSFISAVPESQR 60
C C+ LR+ C + C+ P QG A+ F A + FG + +S +P R
Sbjct: 8 CGACKFLRRRCVKGCVFAPYF-----CHEQG-ASHFAAIHQVFGASNASKLLSHLPMEDR 61
Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWT 88
++ YEA R +P+ G V +++
Sbjct: 62 REAATTIYYEAQARRQDPIYGCVSHIFS 89
>sp|Q9FFL3|LBD35_ARATH LOB domain-containing protein 35 OS=Arabidopsis thaliana GN=LBD35
PE=2 SV=1
Length = 206
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 3 CNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPA 62
C+ C+V++ C+ +CI P P + + + FG + ++ + QR
Sbjct: 6 CSACKVMKCDCAPNCIFAP-----HFPLTNLETFERLHRIFGAGNVFKILANLDPIQRET 60
Query: 63 LFQSLLYEACGRTVNPVNGAVGLL 86
+L YEA +P+ G VG+
Sbjct: 61 AVNALCYEAEALERDPIFGCVGIF 84
>sp|Q9C8V8|LBD5_ARATH LOB domain-containing protein 5 OS=Arabidopsis thaliana GN=LBD5
PE=2 SV=1
Length = 122
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 41 KFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHV 93
+ FG +++ + PE ++ L S++ E T +P++G G++ W +
Sbjct: 43 ELFGTPNIITMMQHAPEEKKQMLATSIIMEGNAWTEDPISGGFGMIQKLMWKI 95
>sp|Q9ZPS9|BRL2_ARATH Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana
GN=BRL2 PE=1 SV=1
Length = 1143
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 180 LDLRLTPRFTGKVPPEVRRRPGTPSMNSEESGTTTCF 216
LDL T TG++PP + R+PG+ +++ SG T F
Sbjct: 524 LDLN-TNHLTGEIPPRLGRQPGSKALSGLLSGNTMAF 559
>sp|Q0BPE6|DAPB_GRABC 4-hydroxy-tetrahydrodipicolinate reductase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dapB
PE=3 SV=1
Length = 261
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 89 GNWHVCQAAVETVLRGGTLRP---VPELLNSCGGSPTPTSDEVSEAEVTCTDMSRLQ--D 143
G+ V +AA + + GGTLRP P + + T E S+A + T S +Q
Sbjct: 19 GSLLVEEAAAQGTVSGGTLRPGSNSPAPVGIPAFADINTLAEASDAVIDFTSASTVQAHA 78
Query: 144 RSFPSSHCRFSSSRSKVSPAKRKRVEESA 172
R+ + + S +SPA K VEE A
Sbjct: 79 RALSKAGTAWILGTSGLSPADEKAVEEIA 107
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,888,785
Number of Sequences: 539616
Number of extensions: 3796996
Number of successful extensions: 8937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 8852
Number of HSP's gapped (non-prelim): 62
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)