BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026366
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + C+ C +EVSI+ +PC HL +CKDC + CP+C++ +V +LS
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFLS 604
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 185 PMKMQM-------ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVY 237
PM+ Q+ +C+ C +EVSI+ +PC HL +CKDC + CP+C+ +V +
Sbjct: 539 PMEEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
Query: 238 LS 239
LS
Sbjct: 599 LS 600
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 170 NLNYLSVVDGSGNSSPMKMQM-------ICRACNIQEVSILLLPCRHLCLCKDCEGLIGV 222
++ Y+ D SG PM+ Q+ C+ C +EVSI+ +PC HL +CK+C +
Sbjct: 537 SMKYVPTEDVSG--LPMEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKECAPSLRK 594
Query: 223 CPVCKAMRTASVEVYLS 239
CP+C+ +V +LS
Sbjct: 595 CPICRGTIKGTVRTFLS 611
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 170 NLNYLSVVDGSGNSSPMKMQMI-----CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCP 224
N+ Y+ D SG S +++ + C+ C +EVSI+ +PC HL +C++C + CP
Sbjct: 538 NMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRKCP 597
Query: 225 VCKAMRTASVEVYLS 239
+C+ +V +LS
Sbjct: 598 ICRGTIKGTVRTFLS 612
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 170 NLNYLSVVDGSGNSSPMKMQMI-----CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCP 224
N+ Y+ D SG S +++ + C+ C +EVS++ +PC HL +C++C + CP
Sbjct: 544 NMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCP 603
Query: 225 VCKAMRTASVEVYLS 239
+C+ + +V +LS
Sbjct: 604 ICRGIIKGTVRTFLS 618
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
C+ C +EVSI+ +PC HL +CKDC + CP+C+ +V +LS
Sbjct: 311 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTFLS 358
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + C+ C +EVSI+ +PC HL +C+DC + CP+C+ +V +LS
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTFLS 604
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+K + +C+ C ++VS+L +PC HL +C +C + CP+C+A SV ++S
Sbjct: 348 LKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAFMS 401
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+K + +C+ C ++VS+L +PC HL +C +C + CP+C+A SV ++S
Sbjct: 292 LKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAFMS 345
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+K + +C+ C +VS++ +PC HL +C +C + CP+C+A SV ++S
Sbjct: 312 LKEERMCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAFMS 365
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 174 LSVVDGSGNSS------PMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCK 227
+SV +GN S +K +C+ C +EV ++ LPC HL C C + CP+C+
Sbjct: 427 MSVATPNGNLSLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCR 486
Query: 228 AMRTASVEVYLS 239
A V +LS
Sbjct: 487 ADIKGFVRTFLS 498
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVY 237
+K Q C C +I+LLPCRH LC DC + CP+C++ + +Y
Sbjct: 891 LKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKISIY 942
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + +C+ C + ++I+ +PC HL CK C + CP+C + T ++++S
Sbjct: 443 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS 496
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + +C+ C + ++I+ +PC HL CK C + CP+C + T ++++S
Sbjct: 444 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS 497
>sp|A2AWP0|BIRC7_MOUSE Baculoviral IAP repeat-containing protein 7 OS=Mus musculus
GN=Birc7 PE=2 SV=1
Length = 285
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 102 VMNCKNKELVEKIKQVSMEVQSWHYKAKYNESVVNALKNNLKQAVAQGSLHVKEGCGDSE 161
++ K ++ VE+I+ + + SW + + ++V + A A GS + +++
Sbjct: 160 LLRSKGRDFVERIQTYTPLLGSWDQREEPEDAV-----SATPSAPAHGSPELLRSRRETQ 214
Query: 162 VDDAASRTNLNYLSVVDGSGNSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIG 221
+D ++ D ++ + C+ C + VSI+ +PC H +C +C +
Sbjct: 215 PED------VSEPGAKDVQEQLRQLQEERRCKVCLDRAVSIVFVPCGHF-VCTECAPNLQ 267
Query: 222 VCPVCKAMRTASVEVYLS 239
+CP+C+ + V +LS
Sbjct: 268 LCPICRVPICSCVRTFLS 285
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV-------CPVCKAMRTASVEVYL 238
C C Q ++LLLPCRHLCLC+ C ++ CP+C+ ++ VYL
Sbjct: 371 CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVYL 424
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + +C+ C + ++I+ +PC HL CK C + CP+C + T ++++S
Sbjct: 443 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCCTVITFKQKIFMS 496
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+C+ C + ++++ +PC HL CK C + CP+C A+ V++S
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS 236
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+C+ C + ++++ +PC HL CK C + CP+C A+ V++S
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCNAVIDFKQRVFMS 236
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+C+ C + ++++ +PC HL CK C + CP+C A+ V++S
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS 236
>sp|Q96CA5|BIRC7_HUMAN Baculoviral IAP repeat-containing protein 7 OS=Homo sapiens
GN=BIRC7 PE=1 SV=2
Length = 298
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
++ + C+ C + VSI+ +PC HL +C +C + +CP+C+A + V +LS
Sbjct: 246 LQEERTCKVCLDRAVSIVFVPCGHL-VCAECAPGLQLCPICRAPVRSRVRTFLS 298
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV-------CPVCKAMRTASVEVYL 238
C C Q ++LLLPCRHLCLC+ C ++ CP+C+ ++ VYL
Sbjct: 380 CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVYL 433
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 180 SGNSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
S S+ + + +C+ C E + LPC H+ C C + CP+C+ T + VY S
Sbjct: 379 SSGSTSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSVTKCPLCRKPFTDVMRVYFS 438
>sp|P41436|IAP_GVCPM Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus
(isolate Mexico/1963) GN=IAP PE=4 SV=1
Length = 275
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+C+ C ++E + +PC H+ C C + CP+C+ + T+ ++VY S
Sbjct: 227 LCKICYVEECIVCFVPCGHVVACAKCALSVDKCPMCRKIVTSVLKVYFS 275
>sp|Q5BKL8|XIAP_XENTR E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis GN=xiap PE=2
SV=1
Length = 492
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
IC+ C + +SI+ +PC HL C C ++ CP+C + ++++S
Sbjct: 444 ICKVCMDRRISIVFIPCGHLVACAVCADVLDKCPICCTIVERRQKIFMS 492
>sp|Q99675|CGRF1_HUMAN Cell growth regulator with RING finger domain protein 1 OS=Homo
sapiens GN=CGRRF1 PE=1 SV=1
Length = 332
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C V+ +LLPCRH CLC C CP+C+
Sbjct: 274 CVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQF 311
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 182 NSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCE-GLIGVCPVCKAMRTASVEVYL 238
N+ ++ + C+ C ++ +L+PCRH C+C C GL CP C+ T +++++
Sbjct: 228 NADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGLDQKCPTCRQDVTDFIKIFV 285
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 32/184 (17%)
Query: 71 REMKQRHTY----SFLSAIEKEVGRRLHGKEMEIEVMNCKN--KELVEKIKQVSMEVQSW 124
R + + H + + SA+ + R L G + + N K+ V IK+ S EV
Sbjct: 266 RAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDH 325
Query: 125 HYKAKYNESVVNALKNN--------LKQAVAQGSLHVKEG--CGDSEVDDAASRTNLNYL 174
+A YN VV+ + N LK + + + EG C + V R
Sbjct: 326 ARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLR------ 379
Query: 175 SVVDGSGNSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASV 234
+K M+C C +E++ PC H C+ C + CPVC++
Sbjct: 380 ----------KLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQ 429
Query: 235 EVYL 238
VYL
Sbjct: 430 HVYL 433
>sp|P41454|IAP2_NPVAC Probable apoptosis inhibitor 2 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP2 PE=4 SV=1
Length = 249
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 174 LSVVDGSGNSSPMKMQMI-CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTA 232
LSV + + P+ Q+ C+ C +E S+ +PCRHL +C +C C VC A
Sbjct: 183 LSVKPSAPPAEPLTQQVSECKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQ 242
Query: 233 SVEV 236
+E
Sbjct: 243 RIET 246
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYL 238
+K M+C AC +E++ PC H C+ C + CPVC++ VYL
Sbjct: 381 LKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYL 433
>sp|Q8BMJ7|CGRF1_MOUSE Cell growth regulator with RING finger domain protein 1 OS=Mus
musculus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C V+ +LLPCRH CLC C CP+C+
Sbjct: 274 CVVCQNGGVNWVLLPCRHACLCDSCVRYFKQCPMCRQF 311
>sp|A5D8Q0|XIAP_XENLA E3 ubiquitin-protein ligase XIAP OS=Xenopus laevis GN=xiap PE=2
SV=2
Length = 488
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYLS 239
+C+ C + ++I+ +PC HL C C ++ CP+C + ++++S
Sbjct: 440 VCKVCMDRRITIVFIPCGHLVACAVCADVLDKCPICCTIIERRQKIFMS 488
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C V+ +LLPCRH CLC C CP+C+
Sbjct: 274 CVVCQNGGVNWVLLPCRHACLCDSCVCYFKQCPMCRQF 311
>sp|O10296|IAP1_NPVOP Apoptosis inhibitor 1 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 275
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCE-GLIGVCPVCKAMRTASVEVYLS 239
C+ C ++ +LLPCRH C+C C L G CP C+ ++++++
Sbjct: 227 CKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCRQDVADFIKIFVT 275
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 181 GNSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGL-----IGVCPVCKA 228
G S +K + C C +E+S++ LPC H LC C L + CP C+A
Sbjct: 749 GAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRA 801
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCK 227
C C + +LPCRHLC+C DC + + CP+C+
Sbjct: 302 CVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICR 341
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 108 KELVEKIKQVSMEVQSWHYKAKYNESVVNALKNNLKQAVAQGSL-HVKEG---CGDSEVD 163
K+ V I++ S EV + +A YN +V+ + ++ + S +EG CG +
Sbjct: 309 KKYVFDIRRTSKEVYDYARRALYNAGIVDMMSRPGERTPSNRSPSREQEGALDCGGCQ-- 366
Query: 164 DAASRTNLNYLSVVDGSGNSSPMKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVC 223
SR L ++ ++C C +E+ PC H+ C++C + C
Sbjct: 367 --QSRLLQEKLQ---------KLREALLCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSC 415
Query: 224 PVCKAMRTASVEVYL 238
PVC++ VYL
Sbjct: 416 PVCRSEVEHVQHVYL 430
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 186 MKMQMICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYL 238
+K M+C C +E++ PC H C+ C + CPVC++ VYL
Sbjct: 381 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYL 433
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 38.1 bits (87), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C+ ++ ++L PC H+C C++C L+ C C+A+
Sbjct: 864 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAV 901
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 191 ICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVY 237
+C+ C E ++ +PC H+ C C + CPVC+ +V +Y
Sbjct: 220 LCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVRMY 266
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C+ ++ ++L PC H+C C++C L+ C C+A+
Sbjct: 866 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAV 903
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C+ ++ ++L PC H+C C++C L+ C C+A+
Sbjct: 866 CVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAV 903
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 37.7 bits (86), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAM 229
C C+ ++ ++L PC H+C C++C L+ C C+A+
Sbjct: 867 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAV 904
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 37.7 bits (86), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 190 MICRACNIQEVSILLLPCRHLCLCKDCEGLIGVCPVCKAMRTASVEVYL 238
+ C C QE+S PC H+ C +C + CPVC++ VYL
Sbjct: 379 LTCALCCEQEISAAFCPCGHMFCCYNCASQLQCCPVCRSEVDRVQHVYL 427
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 37.7 bits (86), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCK 227
C C + ++PCRHLCLC DC + CP+C+
Sbjct: 321 CVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICR 360
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 37.4 bits (85), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCKAMRTASVEV 236
C C L+LPCRHLCLC C + CP+C+ A +++
Sbjct: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCKAMRTASVEV 236
C C L+LPCRHLCLC C + CP+C+ A +++
Sbjct: 279 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCKAMRTASVEV 236
C C L+LPCRHLCLC C + CP+C+ A +++
Sbjct: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLIGV----CPVCKAMRTASVEV 236
C C L+LPCRHLCLC C + CP+C+ A +++
Sbjct: 276 CVVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICRLPFRALLQI 324
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 192 CRACNIQEVSILLLPCRHLCLCKDCEGLI----GVCPVCK 227
C C + +LPCRH+C+C C L+ +CP+C+
Sbjct: 243 CVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICR 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,161,442
Number of Sequences: 539616
Number of extensions: 3273578
Number of successful extensions: 11343
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 11191
Number of HSP's gapped (non-prelim): 235
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)