Query 026372
Match_columns 239
No_of_seqs 123 out of 923
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 12:04:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ibx_A TENA, HP1287, putative 100.0 2.7E-56 9.2E-61 376.3 21.0 216 8-238 1-221 (221)
2 3no6_A Transcriptional activat 100.0 2.4E-56 8.1E-61 382.6 18.3 213 10-238 18-237 (248)
3 3mvu_A TENA family transcripti 100.0 2.2E-55 7.4E-60 372.0 21.0 213 9-238 4-226 (226)
4 4fn6_A Thiaminase-2, thiaminas 100.0 3.1E-55 1E-59 371.8 19.0 211 12-238 1-218 (229)
5 2qcx_A Transcriptional activat 100.0 9.3E-53 3.2E-57 363.3 26.9 212 11-238 27-242 (263)
6 2f2g_A SEED maturation protein 100.0 8.1E-54 2.8E-58 360.9 18.0 211 11-238 3-220 (221)
7 1z72_A Transcriptional regulat 100.0 1.4E-52 4.9E-57 354.3 23.7 207 12-237 14-224 (225)
8 1rtw_A Transcriptional activat 100.0 3.5E-52 1.2E-56 350.9 22.8 204 14-238 2-208 (220)
9 2gm8_A TENA homolog/THI-4 thia 100.0 4.6E-52 1.6E-56 350.4 19.6 208 11-238 8-220 (221)
10 2qzc_A Transcriptional activat 100.0 5.6E-52 1.9E-56 348.2 17.7 202 11-238 4-209 (214)
11 3rm5_A Hydroxymethylpyrimidine 100.0 5.3E-51 1.8E-55 384.8 26.3 215 9-238 327-549 (550)
12 1udd_A Transcriptional regulat 100.0 1.2E-51 4.3E-56 348.9 18.3 208 11-238 2-214 (226)
13 2a2m_A Hypothetical protein BT 100.0 7.9E-49 2.7E-53 337.7 22.0 202 12-238 48-251 (258)
14 1wwm_A Hypothetical protein TT 100.0 4.2E-49 1.4E-53 325.2 19.3 189 12-236 2-190 (190)
15 3oql_A TENA homolog; transcrip 100.0 5.3E-43 1.8E-47 300.6 14.8 219 3-238 10-247 (262)
16 1rcw_A CT610, CADD; iron, DI-i 100.0 2E-35 6.7E-40 249.4 15.7 204 10-238 4-221 (231)
17 3dde_A TENA/THI-4 protein, dom 100.0 1.2E-31 4E-36 228.0 14.4 206 12-237 2-219 (239)
18 3hlx_A Pyrroloquinoline-quinon 100.0 6.9E-29 2.3E-33 212.6 15.0 203 10-237 8-227 (258)
19 3bjd_A Putative 3-oxoacyl-(acy 99.9 9.2E-23 3.2E-27 181.0 13.5 204 10-237 106-324 (332)
20 3b5o_A CADD-like protein of un 99.3 8.2E-11 2.8E-15 98.2 14.1 182 28-236 23-226 (244)
21 2q32_A Heme oxygenase 2, HO-2; 98.1 0.00019 6.5E-09 61.2 16.7 116 7-132 26-142 (264)
22 1wov_A Heme oxygenase 2; HOMO 98.1 0.00017 5.7E-09 61.0 16.1 171 12-196 2-181 (250)
23 1wzd_A Heme oxygenase; electro 97.9 0.00082 2.8E-08 55.4 17.2 174 9-196 3-183 (215)
24 1we1_A Heme oxygenase 1; oxido 97.8 0.00028 9.4E-09 59.3 12.8 169 12-196 3-178 (240)
25 1j02_A Heme oxygenase 1; alpha 97.7 0.00085 2.9E-08 57.2 14.3 114 9-132 8-122 (267)
26 1n45_A Heme oxygenase 1, HO-1; 97.7 0.0031 1.1E-07 52.6 16.5 114 9-132 8-122 (233)
27 1sk7_A Hypothetical protein PA 88.1 1.3 4.6E-05 35.4 6.9 64 2-68 2-65 (198)
28 1j77_A HEMO, heme oxygenase; p 82.3 3.5 0.00012 33.3 6.8 57 8-67 5-61 (209)
29 2veb_A Protoglobin; hemoprotei 53.6 23 0.00077 28.3 5.4 48 183-237 143-190 (195)
30 3ov9_A Nucleoprotein; orthogon 46.1 1.1E+02 0.0039 25.0 8.5 92 26-122 140-235 (245)
31 4h5l_A Nucleoprotein; nucleoca 42.7 1.2E+02 0.004 25.1 8.2 91 27-122 147-241 (253)
32 2f3y_B Voltage-dependent L-typ 38.0 12 0.00042 19.6 1.0 9 49-57 4-12 (26)
33 1dvk_A PRP18; PRE-mRNA splicin 34.0 38 0.0013 26.4 3.7 43 33-75 67-115 (173)
34 2be6_D Voltage-dependent L-typ 31.2 26 0.00087 20.0 1.7 15 43-57 6-21 (37)
35 2jpq_A UPF0352 protein VP2129; 29.4 1.3E+02 0.0046 20.3 5.5 42 176-226 6-66 (83)
36 1vp7_A Exodeoxyribonuclease VI 29.1 1.1E+02 0.0039 21.5 5.2 38 179-227 29-66 (100)
37 2juw_A UPF0352 protein SO_2176 28.3 1.4E+02 0.0047 20.1 5.5 42 176-226 6-66 (80)
38 1unk_A Colicin E7; immunity pr 25.0 77 0.0026 21.8 3.6 40 174-226 7-46 (87)
39 2jrx_A UPF0352 protein YEJL; h 23.7 1.4E+02 0.0046 20.3 4.5 42 176-226 6-66 (83)
40 3l9k_W Dynein intermediate cha 21.0 1E+02 0.0034 17.8 3.0 23 176-198 9-31 (38)
41 3u43_A Colicin-E2 immunity pro 20.9 1.2E+02 0.0041 21.1 4.0 38 174-225 7-44 (94)
42 2juz_A UPF0352 protein HI0840; 20.7 1.4E+02 0.0046 20.1 4.0 51 176-226 6-66 (80)
No 1
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=100.00 E-value=2.7e-56 Score=376.33 Aligned_cols=216 Identities=16% Similarity=0.196 Sum_probs=199.7
Q ss_pred ccCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHH
Q 026372 8 DAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVI 87 (239)
Q Consensus 8 ~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l 87 (239)
|+..|+|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+
T Consensus 1 ~~~~M~f~~~L~~~~~~~~~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~ 75 (221)
T 3ibx_A 1 DPFTMQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACD-----EAVMREF 75 (221)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-----HHHHHHH
T ss_pred CCCcchHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----HHHHHHH
Confidence 46678999999999999999999999999999999999999999999999999999999999999999 7889999
Q ss_pred HHHHhhH-HHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026372 88 LGGMAGL-HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 88 ~~~~~~i-~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
+..++.+ .+|+.+|+.+++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++....
T Consensus 76 ~~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~ 154 (221)
T 3ibx_A 76 SNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG-FKGSIKEVAAAVLSCGWSYLVIAQNLSQIP 154 (221)
T ss_dssp HHHHHHHHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHTHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9988665 5799999999999999974 4788999999999999996 567999999999999999999999987643
Q ss_pred C-CCCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 164 T-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~-~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
. +.+++|++||++|+|++|.+.|++++++||+++...++ +++++|+++|+++|++|++||||||++
T Consensus 155 ~~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 221 (221)
T 3ibx_A 155 NALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSK---------QEIEKLKEIFITTSEYEYLFWDMAYQS 221 (221)
T ss_dssp STTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 23568999999999999999999999999999988888 899999999999999999999999974
No 2
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=100.00 E-value=2.4e-56 Score=382.58 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=197.0
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026372 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..++|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+++..++.
T Consensus 18 ~~~~ft~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~-----~~~~~~~~~ 92 (248)
T 3no6_A 18 QGMTFSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSS-----MEDVKFLVE 92 (248)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSC-----HHHHHHHHH
T ss_pred CCccHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999 788999999
Q ss_pred HHhhH-HHHHHHHHHHHHHcCCCC----CCCCCchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026372 90 GMAGL-HDEIAWFKKEASKWGVEL----SETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 90 ~~~~i-~~E~~~h~~~~~~~gi~~----~~~~~~p~~~~Y~~~l~~~a~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
.++.+ .+|+.+|+++++.+||+. +..+++|+|.+||+||++++ .. ++++++++|++||+|+|.+||+++....
T Consensus 93 ~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a-~~~g~~~~~laAl~PC~w~Y~eig~~l~~~~ 171 (248)
T 3no6_A 93 QIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNA-FARENAAFTIAAMAPCPYVYAVIGKRAMEDP 171 (248)
T ss_dssp HHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHH-HHCSSTHHHHHHHTHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98764 679999999999999996 34689999999999999996 55 7999999999999999999999876543
Q ss_pred C-CCCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 164 T-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~-~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
+ +.+++|++||++|+ ++|.+.|++++++||+++...++ +++++|+++|+++|++|++||||||++
T Consensus 172 ~~~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~ay~~ 237 (248)
T 3no6_A 172 KLNKESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSE---------TEKKEIKENFLQSTIHERHFFNMAYIN 237 (248)
T ss_dssp TCCTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 13468999999999 99999999999999999988888 899999999999999999999999975
No 3
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=100.00 E-value=2.2e-55 Score=372.05 Aligned_cols=213 Identities=19% Similarity=0.246 Sum_probs=196.3
Q ss_pred cCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHH
Q 026372 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
+-..+|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+.
T Consensus 4 ~p~g~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~~ 78 (226)
T 3mvu_A 4 EPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSET-----HSEMLAAV 78 (226)
T ss_dssp STTCHHHHHHHHHTTTHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-----HHHHHHHH
T ss_pred CCCCcHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999999 78899999
Q ss_pred HHHhhHH-HHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 026372 89 GGMAGLH-DEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT 164 (239)
Q Consensus 89 ~~~~~i~-~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~ 164 (239)
..++.+. +|+.+|+.+++.+||+.+ ..+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++....
T Consensus 79 ~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~- 156 (226)
T 3mvu_A 79 GTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAG-YSGDLLDLLAALAPCVMGYGEIGKRLTAEA- 156 (226)
T ss_dssp HHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 8887765 599999999999999973 5788999999999999995 667999999999999999999999886532
Q ss_pred CCCchHHHHhcccCChHHHHHHHHHHHHHH-----HHHh-hcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIAN-----RLLE-KASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld-----~~~~-~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|++||++|+|++|.+.|++++++|| +++. ..++ +++++|+++|+++|++|++||||||++
T Consensus 157 -~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 226 (226)
T 3mvu_A 157 -TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSS---------PRWSRLCQTFHTATELEVGFWQMGLTP 226 (226)
T ss_dssp -SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGS---------HHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccCh---------HHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 35689999999999999999999999999 8876 6676 899999999999999999999999975
No 4
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-55 Score=371.78 Aligned_cols=211 Identities=14% Similarity=0.172 Sum_probs=195.8
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
|+|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+...+
T Consensus 1 M~ft~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~-----~~~~~~~~~~~ 75 (229)
T 4fn6_A 1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNS-----MNDVKFLVEQI 75 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCS-----HHHHHHHHHHH
T ss_pred CcHHHHHHHhHHHHHHHHHCChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999 78899999988
Q ss_pred hhH-HHHHHHHHHHHHHcCCCCC----CCCCchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 026372 92 AGL-HDEIAWFKKEASKWGVELS----ETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPDTN 165 (239)
Q Consensus 92 ~~i-~~E~~~h~~~~~~~gi~~~----~~~~~p~~~~Y~~~l~~~a~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~ 165 (239)
+.+ .+|+.+|+.+++.+||+.+ ..+++|+|.+||+||++++ .. ++++++++|++||+|+|.+||+++....+.
T Consensus 76 ~~~~~~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~ 154 (229)
T 4fn6_A 76 EFMVEGEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQA-HSRENAIYTIAAMAPCPYIYAELAKRSQSDHKL 154 (229)
T ss_dssp HHHHSCCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHH-HHCCSHHHHHHHHTHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 764 6799999999999999864 4689999999999999996 55 799999999999999999999998764321
Q ss_pred -CCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 166 -TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 -~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|++||++|+ ++|.+.|+.++++||+++...++ +++++|+++|+++|++|++||||||++
T Consensus 155 ~~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 218 (229)
T 4fn6_A 155 NREKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSD---------KELEQVKQVFLESCIHERRFFNMAMTL 218 (229)
T ss_dssp CTTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3468999999999 99999999999999999988888 899999999999999999999999975
No 5
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=100.00 E-value=9.3e-53 Score=363.27 Aligned_cols=212 Identities=18% Similarity=0.204 Sum_probs=197.1
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026372 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+...
T Consensus 27 mm~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~-----~~~~~~l~~~ 101 (263)
T 2qcx_A 27 GMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKD-----LYTTGRMASH 101 (263)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999 7889999999
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026372 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
+.. +..|+.+|+++++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++.....+
T Consensus 102 i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a-~~g~~~~~laAl~pC~w~Y~~ig~~l~~~~~~- 179 (263)
T 2qcx_A 102 AQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSV-LSGNFAEILAALLPCYWLYYEVGEKLLHCDPG- 179 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 876 56799999999999999963 5789999999999999996 67899999999999999999999998654333
Q ss_pred CchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
+++|.+||+.|++++|.+.|+.++++||+++...++ +++++++++|+++|++|++||||+|+.
T Consensus 180 ~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 242 (263)
T 2qcx_A 180 HPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTE---------EVRAKMKENFVISSYYEYQFWGMAYRK 242 (263)
T ss_dssp SHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999988887 889999999999999999999999975
No 6
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=100.00 E-value=8.1e-54 Score=360.89 Aligned_cols=211 Identities=65% Similarity=1.124 Sum_probs=194.0
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhH----HHH
Q 026372 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGD----TEV 86 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~----~~~ 86 (239)
.++|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+. ++.
T Consensus 3 ~~~f~~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~ 77 (221)
T 2f2g_A 3 KRGVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACK-----DSGESSDMEV 77 (221)
T ss_dssp --CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCSCTTHHHH
T ss_pred CCcHHHHHHHhCHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhhHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999 455 899
Q ss_pred HHHHHhhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHHHhhccC--CC
Q 026372 87 ILGGMAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESL-MSPEVDYTVAITVFWAIEAVYQESFAHCLE--PD 163 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~~~~~~gi~~~~~~~~p~~~~Y~~~l~~~-a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~--~~ 163 (239)
+...+..+.+|+.+|+++++.+||+.++.+++|+|.+||+||+++ + ..++++++++|++||+|+|.+||+++.. ..
T Consensus 78 l~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~p~~~aY~~~l~~~~~-~~~~~~~~~aAl~pc~~~Y~~i~~~l~~~~~~ 156 (221)
T 2f2g_A 78 VLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRANQEYGRFLEDLMS-SEVKYPVIMTAFWAIEAVYQESFAHCLEDGNK 156 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHHHHHHTTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhcCCCHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999886688899999999999999987788999999999999999 7 5679999999999999999999998754 32
Q ss_pred CCCCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 164 TNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
. +++|.+||+.|++++|.+.|+.++++||+++...++ +++++++++|+++|++|++||||+|++
T Consensus 157 ~--~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2f2g_A 157 T--PVELTGACHRWGNDGFKQYCSSVKNIAERCLENASG---------EVLGEAEDVLVRVLELEVAFWEMSRGG 220 (221)
T ss_dssp S--SSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCH---------HHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred C--CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 237999999999999999999999999999988887 889999999999999999999999975
No 7
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=100.00 E-value=1.4e-52 Score=354.25 Aligned_cols=207 Identities=17% Similarity=0.213 Sum_probs=190.5
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+...+
T Consensus 14 ~~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~~ 88 (225)
T 1z72_A 14 GLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADK-----LESKLRFAKQL 88 (225)
T ss_dssp HHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-----HHHHHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999999999999999999999999 78899999988
Q ss_pred hh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 026372 92 AG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTP 167 (239)
Q Consensus 92 ~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~ 167 (239)
+. +.+|+.+|+.+++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||++ ... .+.+
T Consensus 89 ~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~i~~~-~~~-~~~~ 165 (225)
T 1z72_A 89 GFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAV-ASSDYAHLLVMLVIAEGLYLDWGSK-DLA-LPEV 165 (225)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHTC-SSC-CCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHh-hcc-CCCc
Confidence 76 56799999999999999974 5789999999999999995 6779999999999999999999998 442 3445
Q ss_pred chHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026372 168 PELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 168 ~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~ 237 (239)
++|.+||+.|++++|.+.|+.++++||+++.. ++ +++ +++++|+++|++|++||||+|+
T Consensus 166 ~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~---------~~~-~~~~~f~~a~~lE~~Fwd~a~~ 224 (225)
T 1z72_A 166 YIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-RE---------DLT-ELQQRWNQAVALELAFFDIGYD 224 (225)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CC---------CHH-HHHHHHHHHHHHHHHHTTTTC-
T ss_pred chHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CH---------HHH-HHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999877 66 677 9999999999999999999986
No 8
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=100.00 E-value=3.5e-52 Score=350.88 Aligned_cols=204 Identities=25% Similarity=0.387 Sum_probs=189.1
Q ss_pred hHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhH---HHHHHHH
Q 026372 14 VIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGD---TEVILGG 90 (239)
Q Consensus 14 ~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~---~~~l~~~ 90 (239)
|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+. ++.+...
T Consensus 2 f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~l~~~ 76 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPD-----DLLPFFAESIYYI 76 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG-----GGHHHHHHHHHHH
T ss_pred hHHHHHHcCHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999 788 8999988
Q ss_pred HhhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026372 91 MAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 91 ~~~i~~E~~~h~~~~~~~gi~~~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
++.+ |+.+|+ ++.+||+. +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++.....+ +++|
T Consensus 77 ~~~i--E~~lh~--~~~~Gi~~-~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~i~~~l~~~~~~-~~~y 149 (220)
T 1rtw_A 77 SKEL--EMFEKK--AQELGISL-NGEIDWRAKSYVNYLLSVA-SLGSFLEGFTALYCEEKAYYEAWKWVRENLKE-RSPY 149 (220)
T ss_dssp HHHH--HHHHHH--HHHTTCCS-SSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHHCSS-CCTT
T ss_pred HHHH--HHHHHH--HHHCCCCC-CCCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchH
Confidence 8777 999999 89999998 7889999999999999996 66799999999999999999999987653222 3689
Q ss_pred HHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 171 QEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 171 ~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+||+.|++++|.+.|+.++++||+++...++ +++++++++|+++|++|++||||+|+.
T Consensus 150 ~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 208 (220)
T 1rtw_A 150 QEFINHWSSQEFGEYVKRIEKILNSLAEKHGE---------FEKERAREVFKEVSKFELIFWDIAYGG 208 (220)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999988887 889999999999999999999999974
No 9
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=100.00 E-value=4.6e-52 Score=350.44 Aligned_cols=208 Identities=18% Similarity=0.204 Sum_probs=190.1
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026372 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.-+.++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+.+..+...
T Consensus 8 ~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~l~~~ 82 (221)
T 2gm8_A 8 HHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPS-----VDLMKTALEL 82 (221)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----HHHHHHHHHH
T ss_pred cchHHHHHHHHhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999 7889999999
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-C
Q 026372 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT-N 165 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~-~ 165 (239)
++. +.+|+.+|+++++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .
T Consensus 83 ~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~~ 161 (221)
T 2gm8_A 83 AYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTC-ALEGFYQCMAALLPCFWSYAEIAERHGGKLREN 161 (221)
T ss_dssp HHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHGGGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHhHHHHHHHHHHHHHhccCCC
Confidence 876 78899999999999999864 4789999999999999995 6679999999999999999999998765322 1
Q ss_pred CCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|.+||+.|++++|.+.|+.++++||++ + +++++++++|+++|++|++||||+|++
T Consensus 162 ~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2gm8_A 162 PVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----G---------LSAEELWPYFKEASLYELEFWQAAYEG 220 (221)
T ss_dssp CCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----S---------CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----h---------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2478999999999999999999999999997 3 457799999999999999999999975
No 10
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=100.00 E-value=5.6e-52 Score=348.24 Aligned_cols=202 Identities=15% Similarity=0.158 Sum_probs=185.9
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026372 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+ + .++++.+...
T Consensus 4 ~M~f~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~~~~~ 77 (214)
T 2qzc_A 4 IVGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-P-----IDKVTKILNL 77 (214)
T ss_dssp CCHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-C-----HHHHHHHHHH
T ss_pred ccHHHHHHHHhhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999 8 7889999999
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026372 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
++. +.+|+.+|+++++.+||+.+ +.+++|+|.+||+||++++ .. +++++++|++||+|+|.+||+++... +
T Consensus 78 ~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~-~~~~~~aAl~pc~~~Y~~ig~~l~~~--~- 152 (214)
T 2qzc_A 78 VFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYA-NL-DWNKFLVAWTPCMFGYSIVGDYVIDS--P- 152 (214)
T ss_dssp HTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HH-CHHHHHHHHHHHHHHHHHHHHHHTTC--S-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hc-CHHHHHHHHHHHHHHHHHHHHHHHhC--C-
Confidence 876 78899999999999999964 4789999999999999996 56 89999999999999999999998653 3
Q ss_pred CchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
+++|.+||+.|++++|.+.|+.++++||++ + ++++ ++++|+++|++|+.|||++|+.
T Consensus 153 ~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~-~~~~f~~a~~~E~~Fwd~a~~~ 209 (214)
T 2qzc_A 153 NEVYKTWASFYASTEYKKRIEAILYALDEV-----S---------ITED-LLNIFINSVRFEIGFWDASLRK 209 (214)
T ss_dssp CHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----C---------CCHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----c---------cHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999997 3 4567 9999999999999999999964
No 11
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-51 Score=384.77 Aligned_cols=215 Identities=18% Similarity=0.257 Sum_probs=197.5
Q ss_pred cCCCchHHHHHH--HcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHH
Q 026372 9 AGKGGVIDTWLR--KHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEV 86 (239)
Q Consensus 9 ~~~~~~~~~L~~--~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~ 86 (239)
...++|++.|++ +++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++ .+++..
T Consensus 327 ~~~~~f~~~L~~~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~-----~~~~~~ 401 (550)
T 3rm5_A 327 IPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPC-----LEDMEK 401 (550)
T ss_dssp CCSSCHHHHHHHSTTTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHH
T ss_pred CCCchHHHHHHhCchhhHHHHHHhCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHH
Confidence 356899999999 9999999999999999999999999999999999999999999999999999999 788999
Q ss_pred HHHHHhhHHHHHHHHHH-HHHHcCC-CC---CCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccC
Q 026372 87 ILGGMAGLHDEIAWFKK-EASKWGV-EL---SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLE 161 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~-~~~~~gi-~~---~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~ 161 (239)
+...++.+.+|+.+|+. ++++||| +. ++.+++|+|++|++||++++ ..++++++++|++||+|+|.+||+++..
T Consensus 402 ~~~~~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a-~~g~~~~~~aAl~pC~~~Y~~ig~~l~~ 480 (550)
T 3rm5_A 402 ELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVS-RRGNWQELVASLTPCLMGYGEALTKMKG 480 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99888888899999999 7779999 65 35789999999999999996 5679999999999999999999998865
Q ss_pred CCC-CCCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 162 PDT-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 162 ~~~-~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
... +.+++|++||++|+|++|.++|+++++++|+++...++ +++++|+++|+++|+||++||||||+.
T Consensus 481 ~~~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 549 (550)
T 3rm5_A 481 KVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPP---------EQLDTLVTIYAEVCELETNFWTAALEY 549 (550)
T ss_dssp CCCSCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCG---------GGHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 322 23468999999999999999999999999999988888 889999999999999999999999863
No 12
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=100.00 E-value=1.2e-51 Score=348.86 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=188.3
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026372 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
-|+|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+ + .+.+..+...
T Consensus 2 ~M~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~l~~~ 75 (226)
T 1udd_A 2 RVMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-E-----YPLMAELIEL 75 (226)
T ss_dssp CCCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-C-----TTHHHHHHHH
T ss_pred CCcHHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999 8 6788999998
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-C
Q 026372 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT-N 165 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~-~ 165 (239)
++. +.+|+.+|+++++.+||+.+ +.+|+|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .
T Consensus 76 ~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~~ 154 (226)
T 1udd_A 76 ARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA-YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDN 154 (226)
T ss_dssp HHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHTHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 876 78899999999999999964 5789999999999999995 6779999999999999999999998754211 1
Q ss_pred CCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|.+||+.|++++|.+.|+.++++||++ +. +++++++++|+++|++|++||||+|+.
T Consensus 155 ~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~----~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 214 (226)
T 1udd_A 155 PIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GH---------SGYDRLRRIFITGSKFELAFWEMAWRG 214 (226)
T ss_dssp SCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CS---------SCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHhCCHHHHHHHHHHHHHHHhC----ch---------hHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2478999999999999999999999999997 20 135689999999999999999999964
No 13
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=100.00 E-value=7.9e-49 Score=337.73 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=181.6
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ ++++.++..+
T Consensus 48 ~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~------~~~~~~~~~~ 121 (258)
T 2a2m_A 48 DSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD------ETLREFFKAK 121 (258)
T ss_dssp TSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS------HHHHHHHHHH
T ss_pred chHHHHHHHhhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999998 4477787777
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCC-CCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026372 92 AGLHDEIAWFKKEASKWGVELSE-TVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~gi~~~~-~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
..+.+ ++|+++++++||+.++ .+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .+++|
T Consensus 122 ~~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a-~~g~~~~~laAl~pC~~~Y~eig~~l~~~~~-~~~~Y 197 (258)
T 2a2m_A 122 AKSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVA-GSLASPYMCVVMLPCEYLWPWIANFLDGYTP-TNSLY 197 (258)
T ss_dssp HHHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHH-HHSCTHHHHHHHHHHHHHHHHHHHHHGGGSC-TTSTT
T ss_pred HHHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchH
Confidence 66555 9999999999999765 688999999999999996 5678999999999999999999998865322 23789
Q ss_pred HHHhc-ccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026372 171 QEVCQ-RWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 171 ~~Wi~-~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~~ 238 (239)
.+||+ +|+++ +.|++++++||+++...+ +++|+++|+++|++|++||||+|+.
T Consensus 198 ~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~------------~~~l~~~F~~a~~lE~~Fwd~a~~~ 251 (258)
T 2a2m_A 198 RFWIEWNGGTP---NGAYQMGNMLEQYRDKID------------EDKAVEIFNTAMNYELKVFTSSTIL 251 (258)
T ss_dssp HHHHHHHCSCC---HHHHHHHHHHHTTGGGSC------------HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhccCCH---HHHHHHHHHHHHHHhhcc------------HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999 99998 799999999999875322 5689999999999999999999975
No 14
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=100.00 E-value=4.2e-49 Score=325.25 Aligned_cols=189 Identities=20% Similarity=0.312 Sum_probs=166.7
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
+.++++|++.++|+|+++++||| |||+++|++||+|||+||.+|+|+++++++|+++ .+ +..++..+
T Consensus 2 ~~~~~~L~~~~~~~w~~~~~HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~-----~~-~~~~~~~~ 68 (190)
T 1wwm_A 2 GMLGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQ-----AH-RAPLVQAL 68 (190)
T ss_dssp ---------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCH-----HH-HHHHHHHH
T ss_pred chHHHHHHHhHHHHHHHHHCCCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCh-----HH-HHHHHHHH
Confidence 56899999999999999999999 9999999999999999999999999999999998 77 89999888
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHH
Q 026372 92 AGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPELQ 171 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~gi~~~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y~ 171 (239)
+.+.+| +++++++||+. +++++|+|.+||+||++++ . ++++++++|++||+|+|.+||+++.. .+++|+
T Consensus 69 ~~~~~E----~~~~~~~gi~~-~~~~~p~~~aY~~~l~~~a-~-~~~~~~~aAl~pc~~~Y~~ig~~l~~----~~~~y~ 137 (190)
T 1wwm_A 69 MATVEE----LDWLLLQGASP-SAPVHPVRAGYIALLEEMG-R-LPYAYRVVFFYFLNGLFLEAWAHHVP----EEGPWA 137 (190)
T ss_dssp HHHHHH----HHHHHTTTCCS-SSCCCHHHHHHHHHHHHHH-H-SCHHHHHHHHHHHHHHHHHHHHHHSC----SSSHHH
T ss_pred HHHHHH----HHHHHHcCCCC-CCCCCHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHHHHHHHhcc----CCcHHH
Confidence 777666 67889999997 7889999999999999996 5 89999999999999999999999864 235799
Q ss_pred HHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhh
Q 026372 172 EVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 172 ~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~ 236 (239)
+||++|+||+|.+.|+++++++|+++...++ ++ ++++|+++|++|++||||+|
T Consensus 138 ~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~---~~~~F~~a~~lE~~Fwd~a~ 190 (190)
T 1wwm_A 138 ELSQHWFAPEFQAVLYDLEVLARGLWEDLDP---------EV---VRTYLRRILEAEKATWSLLL 190 (190)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHHHHTTSCH---------HH---HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHhCCH---------HH---HHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999887765 44 99999999999999999986
No 15
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=100.00 E-value=5.3e-43 Score=300.62 Aligned_cols=219 Identities=10% Similarity=0.062 Sum_probs=180.4
Q ss_pred CccccccCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-h
Q 026372 3 GKAKEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDS-K 81 (239)
Q Consensus 3 ~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~-~ 81 (239)
|...+.+..++|+++|++.+.|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++....+ .
T Consensus 10 ~~~~~~~~~p~~se~L~~~~~~iw~~i~~HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~~ 89 (262)
T 3oql_A 10 GPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGED 89 (262)
T ss_dssp SCTTCGGGSCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHHH
T ss_pred CccccccCCcHHHHHHHHHhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCChH
Confidence 566788899999999999999999999999999999999999999999999999999999999999999998732210 1
Q ss_pred hHHHHHHHHHhhHHHHH---HHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHH
Q 026372 82 GDTEVILGGMAGLHDEI---AWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQES 155 (239)
Q Consensus 82 ~~~~~l~~~~~~i~~E~---~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i 155 (239)
+.+..+. .++..|+ ++|+++|+.+||+.+ +.+++|+|.+||+||++++ ..++++++++|+. .|+|.+|
T Consensus 90 ~~~~~l~---~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a-~~g~l~e~lAAl~--ya~e~~i 163 (262)
T 3oql_A 90 MARRWLM---RNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTS-SSDSLAVAMAATN--YAIEGAT 163 (262)
T ss_dssp HHHHHHH---HHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHH-HHSCHHHHHHHTT--THHHHHH
T ss_pred HHHHHHH---HHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHH-ccCCHHHHHHHHH--HHHHHHh
Confidence 2233332 3344444 455688999999974 5789999999999999996 6789999999986 6789999
Q ss_pred Hh---------hccCCCCCC-CchHHHHhcccCChHHHHH-HHHHHHHHHHHHhhc-ChhhhcccCcHHHHHHHHHHHHH
Q 026372 156 FA---------HCLEPDTNT-PPELQEVCQRWGNDGFGQY-CHSLKKIANRLLEKA-SDDLIMGKAGDDVLKKAEVELIR 223 (239)
Q Consensus 156 ~~---------~~~~~~~~~-~~~y~~Wi~~y~s~~f~~~-v~~~~~~ld~~~~~~-~~~~~~~~~~~~~~~~l~~iF~~ 223 (239)
|+ .+....+++ ++.|.+||+.|+ +|.+. +...+++||+++... ++ +++++++++|++
T Consensus 164 g~~s~~~~~g~~~~~~~~~~~~~~~~~w~~~h~--~~D~~H~~e~~~li~~l~~~~~~~---------~e~~~~~~a~~~ 232 (262)
T 3oql_A 164 GEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHA--QYDDAHPWEALEIICTLVGNKPSL---------QLQAELRQAVTK 232 (262)
T ss_dssp HHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHHH--TCC-CHHHHHHHHHHHHHCSSCCH---------HHHHHHHHHHHH
T ss_pred hhHHHHhhhhHHHhcCCCcccChHHHHHHHHHH--HHHHHhHHHHHHHHHHHhccCCCH---------HHHHHHHHHHHH
Confidence 97 332211111 346899999998 67666 999999999999766 66 889999999999
Q ss_pred HHHHHHHhchhhhcC
Q 026372 224 VLEHEVEFWNMSRGT 238 (239)
Q Consensus 224 ~~~~E~~Fwd~a~~~ 238 (239)
++.+|+.||||||+.
T Consensus 233 S~~~~~~fld~~y~~ 247 (262)
T 3oql_A 233 SYDYMYLFLERCIQL 247 (262)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999963
No 16
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=100.00 E-value=2e-35 Score=249.45 Aligned_cols=204 Identities=11% Similarity=0.099 Sum_probs=170.1
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026372 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..|+|++.|++..+ |+.+++|||+++|.+||||++.|++||+|||+||.+|.|+++.+++|+++ .+.+..++.
T Consensus 4 t~m~f~~~L~~~~~--~~~~~~HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~-----~~~~~~~~~ 76 (231)
T 1rcw_A 4 VFMNFLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDD-----LEARKLLLD 76 (231)
T ss_dssp ---CHHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCC-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HhhcccCHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----HHHHHHHHH
Confidence 45789999999888 89999999999999999999999999999999999999999999999999 677777777
Q ss_pred HHhhH----HHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCC
Q 026372 90 GMAGL----HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEP 162 (239)
Q Consensus 90 ~~~~i----~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~ 162 (239)
.+... ..|+++|.++++.+|++.+ +.++.|+|++|++|+++++ ..+++.++++|++++++++..+......
T Consensus 77 ~i~~e~~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~-~~~~~~~~laal~~~E~~~~~~~~~~~~- 154 (231)
T 1rcw_A 77 NLMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWC-TGDSLAAGVAALYSYESQIPRIAREKIR- 154 (231)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTHHHHHHHHHH-
T ss_pred HHHHhcCCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 66433 4579999999999999963 4678999999999999996 6778999999987767777666544321
Q ss_pred CCCCCchHHHHhcccCChHH-------HHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhh
Q 026372 163 DTNTPPELQEVCQRWGNDGF-------GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMS 235 (239)
Q Consensus 163 ~~~~~~~y~~Wi~~y~s~~f-------~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a 235 (239)
.-++|.+|++.|+.+.| .+.++.+.+++|+++. ++++++.++|++++++|+.|||++
T Consensus 155 ---~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~le~~fwd~~ 218 (231)
T 1rcw_A 155 ---GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK-------------DDADKVLEASQEVTQSLYGFLDSF 218 (231)
T ss_dssp ---HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS-------------SCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11245589999999999 6677999999999874 235689999999999999999999
Q ss_pred hcC
Q 026372 236 RGT 238 (239)
Q Consensus 236 ~~~ 238 (239)
|..
T Consensus 219 ~~~ 221 (231)
T 1rcw_A 219 LDP 221 (231)
T ss_dssp C--
T ss_pred Hhc
Confidence 864
No 17
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.97 E-value=1.2e-31 Score=228.05 Aligned_cols=206 Identities=10% Similarity=0.109 Sum_probs=170.6
Q ss_pred CchH--HHHHHHcHHHHHHhhhC-HHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChh--HHHH
Q 026372 12 GGVI--DTWLRKHRLIYIGATRH-PFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKG--DTEV 86 (239)
Q Consensus 12 ~~~~--~~L~~~~~~~w~~~~~H-pFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~--~~~~ 86 (239)
|+|+ +.|+++++|+|+++++| |||++|.+||||.+.|++||+|||+||.+|+|+++.+++|+++ .+ .+..
T Consensus 2 ~~~~~~~~L~~~~~~~w~~~~~h~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~-----~~~~~~~~ 76 (239)
T 3dde_A 2 MSIIDLTKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKD-----LPGKYLSF 76 (239)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSS-----CCHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----chHHHHHH
Confidence 4555 99999999999999999 9999999999999999999999999999999999999999998 45 6677
Q ss_pred HHHHHhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCC
Q 026372 87 ILGGMAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEP 162 (239)
Q Consensus 87 l~~~~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~ 162 (239)
+...+.. +..|..++.+ ++.+|++.+ +.+|+|+|.+|++||+.++ ..+++..+++++++||++| .++..+...
T Consensus 77 ~~~~~~~e~~~e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a-~~~~~~~~la~~~~~E~~y-~~~~~~~~~ 153 (239)
T 3dde_A 77 CFHHAHEEAGHELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWIS-ATGNPVQRLGYSYWAENVY-GYIDPVLKA 153 (239)
T ss_dssp HHHHHHHHTTTHHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HSSCGGGGHHHHHHHHTCH-HHHHHHHHH
T ss_pred HHHHHHHHHChHHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 7776643 4556666666 889999974 4788999999999999996 5568889999999999999 666644320
Q ss_pred ---CCCCCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026372 163 ---DTNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 163 ---~~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~ 237 (239)
.-+-++....|+..+...+- +.++.+.++||+++ .++ ++++++.+..+.++++...||+..+.
T Consensus 154 l~~~~~l~~~~~~f~~~h~~~d~-~h~~~~~~~ld~~~--~~~---------~~~~~ii~~a~~~~~l~~~~f~~l~~ 219 (239)
T 3dde_A 154 IQSTLDLTPQSMKFFIAHSKIDA-KHAEEVNEMLHEVC--KTQ---------EDVDSVVAVMENSLVLTARILDDVWK 219 (239)
T ss_dssp HHHHTTCCGGGGHHHHHHHHHHH-HHHHHHHHHHHHHC--CSH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCHHHHHHHHHHHhcch-hHHHHHHHHHHHHc--CCH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122335799999987764 56688999999986 356 78999999999999999999998763
No 18
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=99.96 E-value=6.9e-29 Score=212.62 Aligned_cols=203 Identities=9% Similarity=0.041 Sum_probs=161.5
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026372 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..+.|++.|++..+++|. +|||+++|.+|+||++.|++|++|||+|+.+|+|.++.+++|+++ .+.++.++.
T Consensus 8 ~~~~F~~~Lr~~~~~~~~---~HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d-----~e~rr~l~~ 79 (258)
T 3hlx_A 8 SPQAFEEALRAKGDFYHI---HHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPD-----AQTRRKWVQ 79 (258)
T ss_dssp CHHHHHHHHHHGGGGSGG---GSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-----HHHHHHHHH
T ss_pred CHHHHHHHHHHHhHHHHc---CChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----HHHHHHHHH
Confidence 346799999999999995 999999999999999999999999999999999999999999999 788999988
Q ss_pred HHhhHH------HHHHHHHHHHHHcCCCCC---CCC-CchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhc
Q 026372 90 GMAGLH------DEIAWFKKEASKWGVELS---ETV-PQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHC 159 (239)
Q Consensus 90 ~~~~i~------~E~~~h~~~~~~~gi~~~---~~~-~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~ 159 (239)
.+.... +|+++|+++++.+|++.+ +.+ +.|+|+.|+++..+.+ ..++++++++|+++|.+ -..|.+..
T Consensus 80 ni~~eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a-~~~s~~e~vAA~L~E~~-~p~i~~~r 157 (258)
T 3hlx_A 80 RILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFA-RRACWQEAACSSLTELF-APQIHQSR 157 (258)
T ss_dssp HHHHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHH-HHSCHHHHHHGGGGGGT-HHHHHHHH
T ss_pred HHHHHhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH-HHHHHHHH
Confidence 874433 788999999999999974 456 6899987777766664 55789999999875332 22332221
Q ss_pred cCCCCCCCchHHHHhcccCChHHHHHHHHH-------HHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhc
Q 026372 160 LEPDTNTPPELQEVCQRWGNDGFGQYCHSL-------KKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFW 232 (239)
Q Consensus 160 ~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~~-------~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fw 232 (239)
.. .-++|..||+.++-+.|...+.+. .+++-.. ..++ ++++++.+++..+|+.++.||
T Consensus 158 ~~----~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~--~~t~---------e~q~~a~~a~~~~~~~lw~~l 222 (258)
T 3hlx_A 158 LD----SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAY--CDSA---------EKQNRMLEILQFKLDILWSML 222 (258)
T ss_dssp HH----HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHH--CCSH---------HHHHHHHHHHHHHHHHHHHHH
T ss_pred hh----cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHH--cCCH---------HHHHHHHHHHHHHHHHHHHHH
Confidence 11 113577899999888887776443 4443222 2256 899999999999999999999
Q ss_pred hhhhc
Q 026372 233 NMSRG 237 (239)
Q Consensus 233 d~a~~ 237 (239)
|.+|.
T Consensus 223 Da~~~ 227 (258)
T 3hlx_A 223 DAMTM 227 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99873
No 19
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=99.89 E-value=9.2e-23 Score=181.04 Aligned_cols=204 Identities=10% Similarity=0.099 Sum_probs=155.8
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026372 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..++|++.|++.+.+ ....+|||++++.+|+|+++.|++||+|||+|+.+|++.++.+++++++ .+.+..+.+
T Consensus 106 s~~~F~~~L~~~~~~--~~~~~HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~-----~~~r~~l~e 178 (332)
T 3bjd_A 106 SEEDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTD-----VDEAAALAR 178 (332)
T ss_dssp CHHHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCS-----HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh--cccccCcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-----HHHHHHHHH
Confidence 345689999998888 7789999999999999999999999999999999999999999999999 666777776
Q ss_pred HH----hhHHHH---HHHHHHHHHHcCCCCC--CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHH----HHHHHHHHHH
Q 026372 90 GM----AGLHDE---IAWFKKEASKWGVELS--ETVPQKANQVYCRFLESLMSPEVDYTVAITVFW----AIEAVYQESF 156 (239)
Q Consensus 90 ~~----~~i~~E---~~~h~~~~~~~gi~~~--~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~----~c~~~Y~~i~ 156 (239)
.+ +....| .++|.++++.+|++.+ ..++.|++..|++|+..++ ..+++.++++++. +|.++|.+++
T Consensus 179 ~i~DE~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~-~~~~~~~alaal~~~E~~~p~~y~~i~ 257 (332)
T 3bjd_A 179 YLYGELGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAF-RHAEVGWGLAVFYITELVVPGNHEKLY 257 (332)
T ss_dssp HHHHHTTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHH-HCSSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44 222334 8999999999999974 4566899999999999995 5678888888877 9999999999
Q ss_pred hhccCCCC-CCC-chHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchh
Q 026372 157 AHCLEPDT-NTP-PELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNM 234 (239)
Q Consensus 157 ~~~~~~~~-~~~-~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~ 234 (239)
+.+.+.+. +.. +.|..||+.-....+.. ...++++.. ++ +....+..+-.++++.++.|||.
T Consensus 258 ~~l~~~g~~~~~~~yf~~HI~lD~~H~~~~----~~~ll~~~~---~~---------~~q~~~~~a~~~~l~~~~~f~D~ 321 (332)
T 3bjd_A 258 RALLQAGLSEDQAEYYKVHISLVPPRAKRE----WQLIARRIP---DV---------QFQNAFLTSLSQHFRVERAYYDA 321 (332)
T ss_dssp HHHHHTTCCTTTTHHHHHHHHHCC---CTT----HHHHHTTTT---CH---------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccchHHHHHHHHhHHHHHHH----HHHHHHhCC---CH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765332 212 56789998765332221 223455542 22 33345666666677999999999
Q ss_pred hhc
Q 026372 235 SRG 237 (239)
Q Consensus 235 a~~ 237 (239)
.+.
T Consensus 322 l~~ 324 (332)
T 3bjd_A 322 IWE 324 (332)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 20
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=99.27 E-value=8.2e-11 Score=98.22 Aligned_cols=182 Identities=14% Similarity=0.168 Sum_probs=125.0
Q ss_pred HhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC----CCCChhHHHHHHHHHhhHHHH------
Q 026372 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKE----SDDSKGDTEVILGGMAGLHDE------ 97 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~----~~~~~~~~~~l~~~~~~i~~E------ 97 (239)
.+.+|||++.++.|+.+ ..+.|++|-+.| +|.++-+++++++. .. ...+..+. .++.+|
T Consensus 23 ~~~~hP~l~~~~~a~~~--ql~~f~~Q~s~F----~ryL~~l~~~~~~~l~~~~~--~~~~~eL~---~NL~EE~G~~d~ 91 (244)
T 3b5o_A 23 SITENPVVQMLSQASFA--QIAYVMQQYSIF----PKELVGFTELARRKALGAGW--NGVAQELQ---ENIDEEMGSTTG 91 (244)
T ss_dssp CTTTCTTGGGTTTCCHH--HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTTC--HHHHHHHH---HHHHHHTTTTTT
T ss_pred hhccCHHHHHHHhccHH--HHHHHHHHHHHH----HHHHHHHHhhcccccccccc--hHHHHHHH---HHHHHHhCCCCC
Confidence 46789999999987644 479999999976 66666666665541 11 01133333 344445
Q ss_pred ----HHHHHHHHH-HcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHH-------HHHHHHhhccCCCCC
Q 026372 98 ----IAWFKKEAS-KWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEA-------VYQESFAHCLEPDTN 165 (239)
Q Consensus 98 ----~~~h~~~~~-~~gi~~~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~-------~Y~~i~~~~~~~~~~ 165 (239)
..+++++++ .+|++..+..|.|+|+.+++-|.+.+ ..++..++.|+++.|. +|..|...+.+. .
T Consensus 92 ~~~H~~lyRr~L~~~lGld~~~~~p~~sT~~~idt~~~lc--s~d~~~aLGA~yatE~iaipe~~ly~~li~gL~~~--~ 167 (244)
T 3b5o_A 92 GISHYTLLADGLEEGLGVAVKNTMPSVATSKLLRTVLSLF--DRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEG--A 167 (244)
T ss_dssp TCCHHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--C
T ss_pred CCchHHHHHHHHHHhcCCCccccCCCchHHHHHHHHHHHh--CCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhC--C
Confidence 479999999 99999988899999999999999996 4456677766543332 677877776442 2
Q ss_pred CCchHHHHhcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhh
Q 026372 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~ 236 (239)
-+..-..+++.+..+.=.+..+.+.++++.+.. . ++..++.+-+++++.....|||.-+
T Consensus 168 ~~~~~l~FF~~HidelE~~Ha~~l~~~l~~~~~---~---------eef~~~~~G~~~~Lda~~~fWdgL~ 226 (244)
T 3b5o_A 168 IPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYIQ---P---------EEFGEFAAGFRAMIDAMQVWWQELA 226 (244)
T ss_dssp CCHHHHHHHHHHHC-------CHHHHHHHTTCC---G---------GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHhhhhHHHHHHHHHHHHHHHHh---h---------HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233345677777553225677778888876532 3 4578999999999999999999754
No 21
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=98.10 E-value=0.00019 Score=61.22 Aligned_cols=116 Identities=13% Similarity=0.021 Sum_probs=79.3
Q ss_pred cccCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHH
Q 026372 7 EDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEV 86 (239)
Q Consensus 7 ~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~ 86 (239)
......+|++.|....+..=+.+-++||+..+.+|+++.+.|..||.|=|++....-.++..... .|. .... .
T Consensus 26 ~~~~~~~~~~~Lr~~T~~~H~~~e~~~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~LE~~l~~~~~-~p~-----l~~~-~ 98 (264)
T 2q32_A 26 NQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKD-HPA-----FAPL-Y 98 (264)
T ss_dssp ---CTTSHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTT-----TGGG-C
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-ChH-----hHhh-c
Confidence 44556689999999999999999999999999999999999999999999999887766654322 111 0000 0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHcCCCC-CCCCCchHhHHHHHHHHHhc
Q 026372 87 ILGGMAGLHDEIAWFKKEASKWGVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~~~~~~gi~~-~~~~~~p~~~~Y~~~l~~~a 132 (239)
+. ..+.+.-.+-+++.--.|-+. +..+|+|++..|+.++..++
T Consensus 99 ~~---~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 142 (264)
T 2q32_A 99 FP---MELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIG 142 (264)
T ss_dssp CH---HHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHH
T ss_pred CH---hhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 00 011122223333333336554 35778999999999999875
No 22
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=98.09 E-value=0.00017 Score=61.05 Aligned_cols=171 Identities=11% Similarity=0.028 Sum_probs=100.5
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|++.|.+..+..=+.+-++|||..+..|+++.+.+..||.|=|++....-.++... .+ ......+..
T Consensus 2 ~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~----~~-----~p~l~~~~~-- 70 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQH----RD-----NEIISAIYF-- 70 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHT----TT-----SHHHHHHCC--
T ss_pred chHHHHHHHHHHHHHHHHHchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----cc-----Chhhhhhcc--
Confidence 5799999999999889999999999999999999999999999999888666555543 22 111111100
Q ss_pred hhHHHHHHHHHHHHHHcCCCC-CCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHH----HHHHHhhccC-CCCC
Q 026372 92 AGLHDEIAWFKKEASKWGVEL-SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAV----YQESFAHCLE-PDTN 165 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~gi~~-~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~----Y~~i~~~~~~-~~~~ 165 (239)
..+.+.-.+-+++.--.|-+. +..+|+|++..|+.++..++ .. +...+++.++.-+.+ -+-|.+.+.+ -+-+
T Consensus 71 ~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~-~~-~P~~llgh~Yv~y~g~lsGGq~i~~~l~k~l~L~ 148 (250)
T 1wov_A 71 PELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIA-AS-EPELLIAHCYTRYLGDLSGGQSLKNIIRSALQLP 148 (250)
T ss_dssp GGGCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHH-HH-CGGGHHHHHHHHHHHHTTHHHHHHHHHHHHTTCC
T ss_pred HhhhhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHh-hc-CHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCC
Confidence 112222223333333336543 24678999999999999975 22 222344434442211 1112222211 1111
Q ss_pred CCchHHHHhcccCCh---HHHHHHHHHHHHHHHH
Q 026372 166 TPPELQEVCQRWGND---GFGQYCHSLKKIANRL 196 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~---~f~~~v~~~~~~ld~~ 196 (239)
.+. =..++..+..+ +-..+.+...+.||++
T Consensus 149 ~~~-g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l 181 (250)
T 1wov_A 149 EGE-GTAMYEFDSLPTPGDRRQFKEIYRDVLNSL 181 (250)
T ss_dssp TTS-SCGGGCCTTCCSHHHHHHHHHHHHHHHHHS
T ss_pred Ccc-cceeeccCCccccccHHHHHHHHHHHHhcC
Confidence 111 12345555533 4455667788888886
No 23
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=97.93 E-value=0.00082 Score=55.36 Aligned_cols=174 Identities=14% Similarity=0.103 Sum_probs=98.5
Q ss_pred cCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHH
Q 026372 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
++..+|++.|.+..+..=+.+-++|||..+..|.++.+.+..||.|=|.+....-.++...... |.... ...
T Consensus 3 ~~~~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~-p~~~~-------~~~ 74 (215)
T 1wzd_A 3 TATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRAS-GFAES-------LLD 74 (215)
T ss_dssp ----CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSTT-------TSC
T ss_pred CccHHHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccC-chhhh-------hcc
Confidence 3456899999999999989999999999999999999999999999999998877777654321 11000 000
Q ss_pred HHHhhHHHHHHHHHHHHHHcCCCC---CCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHH----HHHHHHHHhhccC
Q 026372 89 GGMAGLHDEIAWFKKEASKWGVEL---SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAI----EAVYQESFAHCLE 161 (239)
Q Consensus 89 ~~~~~i~~E~~~h~~~~~~~gi~~---~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c----~~~Y~~i~~~~~~ 161 (239)
..+.+. ..-++-++.+|.+. +..+|+|++..|++++..++ ...+....++.++.- .-+-+-|.+.+.+
T Consensus 75 ---~el~R~-~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~-~~~~p~~~lg~~Yv~YeG~~~GGq~i~~~~~~ 149 (215)
T 1wzd_A 75 ---PALNRA-EVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIR-DNVDGPALVAHHYVRYLGDLSGGQVIARMMQR 149 (215)
T ss_dssp ---GGGCCH-HHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---chhccH-HHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 001111 11111222333332 24678999999999999874 222022333333322 1111112222211
Q ss_pred CCCCCCchHHHHhcccCChHHHHHHHHHHHHHHHH
Q 026372 162 PDTNTPPELQEVCQRWGNDGFGQYCHSLKKIANRL 196 (239)
Q Consensus 162 ~~~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~ 196 (239)
.. +-++.=..++..+..++-...-+...+.||++
T Consensus 150 ~l-~l~~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~ 183 (215)
T 1wzd_A 150 HY-GVDPEALGFYHFEGIAKLKVYKDEYREKLNNL 183 (215)
T ss_dssp HH-CCCGGGCGGGCCTTCSCHHHHHHHHHHHHHTC
T ss_pred hc-CcCcccceeeecCCcCCHHHHHHHHHHHHhcC
Confidence 00 11111124455555334455667788888876
No 24
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=97.84 E-value=0.00028 Score=59.34 Aligned_cols=169 Identities=11% Similarity=0.017 Sum_probs=98.0
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026372 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|++.|.+..+..=+.+-+.||++.+..|+++.+.+..||.|=|++....-.++...... |. +...+
T Consensus 3 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~~-p~-----------l~~~~ 70 (240)
T 1we1_A 3 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDH-PI-----------LSHIY 70 (240)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTS-TT-----------GGGGC
T ss_pred hHHHHHHHHHHHHHHHHHHCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccC-ch-----------hHhhh
Confidence 4799999999999888899999999999999999999999999999888776666553221 10 00000
Q ss_pred -hhHHHHHHHHHHHHHHcCCCC-CCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH----HHHhhccCC-CC
Q 026372 92 -AGLHDEIAWFKKEASKWGVEL-SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQ----ESFAHCLEP-DT 164 (239)
Q Consensus 92 -~~i~~E~~~h~~~~~~~gi~~-~~~~~~p~~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~----~i~~~~~~~-~~ 164 (239)
..+.+.-.+-+++.--.|-+. +..+|+|++..|+.++..++ .. +...+++.++.-+.+=. -|.+.+.+. +-
T Consensus 71 ~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~-~~-~P~~llg~~Yv~y~g~lsGGq~i~~~~~~~l~L 148 (240)
T 1we1_A 71 FPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVA-AT-APELLVAHSYTRYLGDLSGGQILKKIAQNAMNL 148 (240)
T ss_dssp CTTSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHH-HH-CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHhhhhHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHh-hc-CHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc
Confidence 011111122223322235543 24678899999999999875 22 22233443444221111 111211110 11
Q ss_pred CCCchHHHHhcccCChHHHHHHHHHHHHHHHH
Q 026372 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIANRL 196 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~ 196 (239)
+... ..++..+..++-..+-+...+.||++
T Consensus 149 ~~~g--~~fy~f~~~~d~~~~k~~fr~~Ld~l 178 (240)
T 1we1_A 149 HDGG--TAFYEFADIDDEKAFKNTYRQAMNDL 178 (240)
T ss_dssp SSSS--CGGGCCTTCSSHHHHHHHHHHHHHTC
T ss_pred Cccc--chhcccCCcCCHHHHHHHHHHHHhcC
Confidence 1111 23455555333344556677778875
No 25
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=97.73 E-value=0.00085 Score=57.23 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=77.8
Q ss_pred cCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHH
Q 026372 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
....+|++.|....+..=+.+-+.||+..+.+|+++.+.|..||.|=|++....-.++..... .|. ...+ .+-
T Consensus 8 ~~~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~-~p~-----l~~~-~~p 80 (267)
T 1j02_A 8 SMSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQ-NPV-----YAPL-YFP 80 (267)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTT-----TGGG-CCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-CcH-----HHHh-cCH
Confidence 345689999999999988899999999999999999999999999999998887666655322 111 1100 000
Q ss_pred HHHhhHHHHHHHHHHHHHHcCCCC-CCCCCchHhHHHHHHHHHhc
Q 026372 89 GGMAGLHDEIAWFKKEASKWGVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 89 ~~~~~i~~E~~~h~~~~~~~gi~~-~~~~~~p~~~~Y~~~l~~~a 132 (239)
..+.+.-.+-+++.--.|-+. +..+++|++..|+.++..++
T Consensus 81 ---eel~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 122 (267)
T 1j02_A 81 ---EELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVG 122 (267)
T ss_dssp ---HHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred ---hhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 011122223333333336654 35788999999999999875
No 26
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=97.66 E-value=0.0031 Score=52.61 Aligned_cols=114 Identities=15% Similarity=0.067 Sum_probs=76.6
Q ss_pred cCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHH
Q 026372 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
.+..+|++.|.+.....=+.+-+.||+..+.+|+++.+.+..||.|=|++....-.++..... .|. ... ...
T Consensus 8 ~~~~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~-~p~-----~~~--~~~ 79 (233)
T 1n45_A 8 SMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKE-SPV-----FAP--VYF 79 (233)
T ss_dssp --CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-STT-----TGG--GCC
T ss_pred CCChHHHHHHHHHHHHHHHHHHccHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc-Cch-----hhh--hcC
Confidence 345689999999999988999999999999999999999999999999999887766665332 111 000 000
Q ss_pred HHHhhHHHHHHHHHHHHHHcCCCC-CCCCCchHhHHHHHHHHHhc
Q 026372 89 GGMAGLHDEIAWFKKEASKWGVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 89 ~~~~~i~~E~~~h~~~~~~~gi~~-~~~~~~p~~~~Y~~~l~~~a 132 (239)
. ..+.+.-.+-+++.--.|-+. +..+|+|++..|+.++..++
T Consensus 80 ~--~el~R~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~ 122 (233)
T 1n45_A 80 P--EELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVG 122 (233)
T ss_dssp H--HHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred H--hhcccHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 0 001111122223222223333 25778999999999999874
No 27
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=88.14 E-value=1.3 Score=35.41 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=47.0
Q ss_pred CCccccccCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026372 2 EGKAKEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAAS 68 (239)
Q Consensus 2 ~~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~ 68 (239)
.--|-+....++|++.|++..+..=+.+-++ |+. ..|.++.+.++.||.|=|.+....-..+..
T Consensus 2 ~~~~~~~~~~~~l~~~Lr~~T~~~H~~~e~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~ 65 (198)
T 1sk7_A 2 DTLAPESTRQNLRSQRLNLLTNEPHQRLESL-VKS--KEPFASRDNFARFVAAQYLFQHDLEPLYRN 65 (198)
T ss_dssp ----------CCHHHHHHHHTHHHHHHHHHH-HHH--HCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CccCCCCCCchhHHHHHHHHHHHHHHHHHHH-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555667899999999999888888888 764 789999999999999999998877766643
No 28
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=82.33 E-value=3.5 Score=33.26 Aligned_cols=57 Identities=7% Similarity=0.009 Sum_probs=47.0
Q ss_pred ccCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026372 8 DAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAA 67 (239)
Q Consensus 8 ~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a 67 (239)
+...++|++.|++..+..=+.+-++ |+. ..|.++.+.++.||.|=|.+....-..+.
T Consensus 5 ~~~~~~l~~~Lr~~T~~~H~~~E~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~ 61 (209)
T 1j77_A 5 ENQALTFAKRLKADTTAVHDSVDNL-VMS--VQPFVSKENYIKFLKLQSVFHKAVDHIYK 61 (209)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHH-HHH--TCTTSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHh-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447789999999999888888888 776 78999999999999999999887766554
No 29
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=53.56 E-value=23 Score=28.32 Aligned_cols=48 Identities=8% Similarity=0.181 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026372 183 GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 183 ~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~E~~Fwd~a~~ 237 (239)
..++.-+..++-+...+...++ +..++|..++.+++.+.+.+|..+|.
T Consensus 143 ia~i~~i~~~i~~~l~~~~~~~-------~~~~~~~~A~~K~~~l~val~~~~Y~ 190 (195)
T 2veb_A 143 VAFIYPITATMKPFLARKGHTP-------EEVEKMYQAWFKATTLQVALWSYPYV 190 (195)
T ss_dssp HHTHHHHHHTTHHHHTSSSCCH-------HHHHHHHHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHHHHHHHHHhCCCH-------HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4555566666666555433211 78899999999999999999999985
No 30
>3ov9_A Nucleoprotein; orthogonal bundle, viral genomic encapsidation, viral protein; 1.60A {Rift valley fever virus} PDB: 3ouo_A 3lyf_A 4h5m_A 4h5o_A 4h5p_A 4h5q_A 4h6f_A 4h6g_A
Probab=46.10 E-value=1.1e+02 Score=25.04 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=59.9
Q ss_pred HHHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHHhh-HH---HHHHHH
Q 026372 26 YIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGMAG-LH---DEIAWF 101 (239)
Q Consensus 26 w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-i~---~E~~~h 101 (239)
+-...-||=.-+|.+-+||.+.++--+--..+|+..|.|...--.-..+. .+..+.+..-++. +. -+-+-.
T Consensus 140 YPr~MMh~sFagLId~~l~~e~~~~i~dAh~Lf~~~FS~tINp~~Rg~s~-----~ev~~sf~~pm~Aa~~s~f~~~eqR 214 (245)
T 3ov9_A 140 YPRHMMHPSFAGMVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTK-----EEVAATFTQPMNAAVNSNFISHEKR 214 (245)
T ss_dssp CCGGGSSGGGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCH-----HHHHHHHHHHHHHHHTCSSSCHHHH
T ss_pred CCHHHhhchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhcCHhhccCCH-----HHHHHHHHhHHHHHHHccCCCHHHH
Confidence 33467799999999999999999999999999999998776521111111 2333333321111 11 134566
Q ss_pred HHHHHHcCCCCCCCCCchHhH
Q 026372 102 KKEASKWGVELSETVPQKANQ 122 (239)
Q Consensus 102 ~~~~~~~gi~~~~~~~~p~~~ 122 (239)
+.++..+||=..+-.|++++.
T Consensus 215 ~~~L~~~gil~~n~~~~~~v~ 235 (245)
T 3ov9_A 215 REFLKAFGLVDSNGKPSAAVM 235 (245)
T ss_dssp HHHHHHTTSBCTTSCBCHHHH
T ss_pred HHHHHHhCccCCCCCCcHHHH
Confidence 789999998766666666443
No 31
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=42.72 E-value=1.2e+02 Score=25.14 Aligned_cols=91 Identities=15% Similarity=-0.030 Sum_probs=60.5
Q ss_pred HHhhhCHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHHhh-HH---HHHHHHH
Q 026372 27 IGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGMAG-LH---DEIAWFK 102 (239)
Q Consensus 27 ~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-i~---~E~~~h~ 102 (239)
-...-||=.-+|.+-+||.+.++--+.-..+|+..|.|.+.--.=..+. .+....+-.-++. ++ -..+-.+
T Consensus 147 P~~MMh~sFagLId~~l~~e~~~~i~~Ah~Lfl~~FsrtINp~~Rg~~~-----~Ev~~sf~~p~~Aai~S~F~~~~qR~ 221 (253)
T 4h5l_A 147 PRAMMHPSFAGIIDLDLPNGAGATIADAHGLFMIEFSKTINPSLRTKQA-----NEVAATFEKPNMAAMSGRFFTREDKK 221 (253)
T ss_dssp CGGGSSGGGGGGCCTTCGGGHHHHHHHHHHHHHHHHHHHHCGGGSSSCH-----HHHHHHHHHHHHHHHTCSSSCHHHHH
T ss_pred CHHHHhhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCHhhcCCCH-----HHHHHHhhHHHHHHHHcCCCCHHHHH
Confidence 3456699999999999999999999999999999999876543332222 2334444332221 11 1223567
Q ss_pred HHHHHcCCCCCCCCCchHhH
Q 026372 103 KEASKWGVELSETVPQKANQ 122 (239)
Q Consensus 103 ~~~~~~gi~~~~~~~~p~~~ 122 (239)
.+++.+||=..+.+++++..
T Consensus 222 ~~L~~~gi~~~n~~~~~~v~ 241 (253)
T 4h5l_A 222 KLLIAVGIIDEDLVLASAVV 241 (253)
T ss_dssp HHHHHTTSBCTTCCBCHHHH
T ss_pred HHHHHcCccCCCCCCcHHHH
Confidence 79999998666665555543
No 32
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=38.00 E-value=12 Score=19.63 Aligned_cols=9 Identities=33% Similarity=0.630 Sum_probs=6.5
Q ss_pred HHHHHHHHH
Q 026372 49 KKWLGQDYI 57 (239)
Q Consensus 49 ~~YL~QD~~ 57 (239)
.-||+|||.
T Consensus 4 at~LIqdyf 12 (26)
T 2f3y_B 4 ATFLIQEYF 12 (26)
T ss_pred hhhhHHHHH
Confidence 358888874
No 33
>1dvk_A PRP18; PRE-mRNA splicing factor, X-RAY crystallography, RNA binding protein; 2.15A {Saccharomyces cerevisiae} SCOP: a.72.1.1
Probab=33.95 E-value=38 Score=26.43 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=35.7
Q ss_pred HHHHhhhcCCCCHHHHH------HHHHHHHHHHHHHHHHHHHHhhhccC
Q 026372 33 PFILAIRDGTVNYSSFK------KWLGQDYIFVREFVAFAASVLVKAWK 75 (239)
Q Consensus 33 pFv~~l~~GtL~~e~f~------~YL~QD~~Yl~~~~r~~a~~~~ka~~ 75 (239)
|.+..|.+++||.+-+. ++++||.-|+.+.-..+-+++.+++=
T Consensus 67 PL~~~Lr~~~L~~dil~~L~~Iv~~~q~~r~y~~And~Yl~LaIGNA~W 115 (173)
T 1dvk_A 67 PLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAW 115 (173)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHHTBCCC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCCC
Confidence 88999999999998764 45555688999888888999999874
No 34
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=31.23 E-value=26 Score=20.04 Aligned_cols=15 Identities=33% Similarity=0.569 Sum_probs=9.5
Q ss_pred CCHHHHH-HHHHHHHH
Q 026372 43 VNYSSFK-KWLGQDYI 57 (239)
Q Consensus 43 L~~e~f~-~YL~QD~~ 57 (239)
+.--+|- -||+|||.
T Consensus 6 vTVGKfYatfLIQdyF 21 (37)
T 2be6_D 6 VTVGKFYATFLIQEYF 21 (37)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHH
Confidence 3333443 79999974
No 35
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=29.39 E-value=1.3e+02 Score=20.30 Aligned_cols=42 Identities=5% Similarity=0.113 Sum_probs=28.7
Q ss_pred ccCChHHHHHHHHHHHHHHHH-------------------HhhcChhhhcccCcHHHHHHHHHHHHHHHH
Q 026372 176 RWGNDGFGQYCHSLKKIANRL-------------------LEKASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 176 ~y~s~~f~~~v~~~~~~ld~~-------------------~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~ 226 (239)
.|+++.+......++.+|++. ....++ ++++.+.+.|.+++.
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGNmvTNlln~~V~~---------~qR~~iAe~Fa~AL~ 66 (83)
T 2jpq_A 6 KYTDEQVEKILAEVALVLEKHAASPELTLMIAGNIATNVLNQRVAA---------SQRKLIAEKFAQALM 66 (83)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCH---------HHHHHHHHHHHHHHH
Confidence 466667777777777777752 122344 788889999998875
No 36
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=29.09 E-value=1.1e+02 Score=21.47 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHH
Q 026372 179 NDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEH 227 (239)
Q Consensus 179 s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~~ 227 (239)
...|.+...+|..+|+++-... -.++.....|.+++.+
T Consensus 29 ~~sFEeal~eLEeIV~~LE~ge-----------l~LEesl~lyeeG~~L 66 (100)
T 1vp7_A 29 PQDFETALAELESLVSAMENGT-----------LPLEQSLSAYRRGVEL 66 (100)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTC-----------SCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCC-----------CCHHHHHHHHHHHHHH
Confidence 3569999999999999985432 2377778888887765
No 37
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha, northeast structural GEN consortium, NESG, structural genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1 PDB: 2qti_A
Probab=28.26 E-value=1.4e+02 Score=20.10 Aligned_cols=42 Identities=7% Similarity=0.166 Sum_probs=28.6
Q ss_pred ccCChHHHHHHHHHHHHHHHH-------------------HhhcChhhhcccCcHHHHHHHHHHHHHHHH
Q 026372 176 RWGNDGFGQYCHSLKKIANRL-------------------LEKASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 176 ~y~s~~f~~~v~~~~~~ld~~-------------------~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~ 226 (239)
.|+++.+......++.+|++. ....++ ++++.+.+.|.+++.
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGN~vTnlln~~V~~---------~qR~~iAe~Fa~AL~ 66 (80)
T 2juw_A 6 KYSNTQVESLIAEILVVLEKHKAPTDLSLMALGNCVTHLLERKVPS---------ESRQAVAEQFAKALA 66 (80)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCH---------HHHHHHHHHHHHHHH
Confidence 456666777777777777752 122344 788889999988875
No 38
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=24.97 E-value=77 Score=21.80 Aligned_cols=40 Identities=23% Similarity=0.313 Sum_probs=26.0
Q ss_pred hcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHH
Q 026372 174 CQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 174 i~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~ 226 (239)
|..|+-.+|-+++..+.+. -. ..+. ++...+.+.|.+.+.
T Consensus 7 i~DYTE~EFl~fv~~i~~~---~~-~~~e---------~~~d~lv~hF~~ite 46 (87)
T 1unk_A 7 ISDYTEAEFVQLLKEIEKE---NV-AATD---------DVLDVLLEHFVKITE 46 (87)
T ss_dssp GGGSCHHHHHHHHHHHHHH---HH-SSCC---------HHHHHHHHHHHHHHC
T ss_pred hhhcCHHHHHHHHHHHHhC---CC-CCCh---------hHHHHHHHHHHHhcC
Confidence 6778888887777766544 11 0233 456788888988764
No 39
>2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: a.284.1.1
Probab=23.68 E-value=1.4e+02 Score=20.25 Aligned_cols=42 Identities=12% Similarity=0.176 Sum_probs=28.0
Q ss_pred ccCChHHHHHHHHHHHHHHHH-------------------HhhcChhhhcccCcHHHHHHHHHHHHHHHH
Q 026372 176 RWGNDGFGQYCHSLKKIANRL-------------------LEKASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 176 ~y~s~~f~~~v~~~~~~ld~~-------------------~~~~~~~~~~~~~~~~~~~~l~~iF~~~~~ 226 (239)
.|+++.+......++.+|++. ....++ ++++.+.+.|.+++.
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGNmvTNlln~~V~~---------~qR~~iAe~Fa~AL~ 66 (83)
T 2jrx_A 6 RYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAP---------AQRQAIANSFARALQ 66 (83)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHSCT---------TSHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCH---------HHHHHHHHHHHHHHH
Confidence 466677777777777777763 112334 667788888888775
No 40
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=21.00 E-value=1e+02 Score=17.75 Aligned_cols=23 Identities=13% Similarity=0.250 Sum_probs=19.3
Q ss_pred ccCChHHHHHHHHHHHHHHHHHh
Q 026372 176 RWGNDGFGQYCHSLKKIANRLLE 198 (239)
Q Consensus 176 ~y~s~~f~~~v~~~~~~ld~~~~ 198 (239)
...|++|..++++--++++++..
T Consensus 9 I~~S~~F~~F~~rsskviERAL~ 31 (38)
T 3l9k_W 9 IILSENFQRFVVRAGRVIERALS 31 (38)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHc
Confidence 35789999999999999998753
No 41
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=20.86 E-value=1.2e+02 Score=21.08 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=22.0
Q ss_pred hcccCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHH
Q 026372 174 CQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVL 225 (239)
Q Consensus 174 i~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~l~~iF~~~~ 225 (239)
|..|+-.+|-++|..+.+ +...++ ++...+.+.|.+.+
T Consensus 7 i~DyTe~Efi~lv~~I~~-----~~~~~E---------~e~d~ll~~fe~it 44 (94)
T 3u43_A 7 ISDYTEAEFLEFVKKICR-----AEGATE---------EDDNKLVREFERLT 44 (94)
T ss_dssp GGGSBHHHHHHHHHHHHH-----TCCSSH---------HHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHh-----cCCCCH---------HHHHHHHHHHHHhC
Confidence 566666666655555543 111233 56777777777765
No 42
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1
Probab=20.65 E-value=1.4e+02 Score=20.13 Aligned_cols=51 Identities=4% Similarity=0.107 Sum_probs=29.3
Q ss_pred ccCChHHHHHHHHHHHHHHHHHhh----------cChhhhcccCcHHHHHHHHHHHHHHHH
Q 026372 176 RWGNDGFGQYCHSLKKIANRLLEK----------ASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 176 ~y~s~~f~~~v~~~~~~ld~~~~~----------~~~~~~~~~~~~~~~~~l~~iF~~~~~ 226 (239)
.|+++.+......++.+|++.-.. .-.+.+......++++.+.+.|.+++.
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGN~vTnlln~~V~~~qR~~iAe~Fa~AL~ 66 (80)
T 2juz_A 6 KYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQAFSNSLI 66 (80)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTSSCSTTHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 467777888888888888763110 000001111111677788888888875
Done!