Query 026373
Match_columns 239
No_of_seqs 294 out of 1160
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 12:05:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we9_A PHD finger family prote 99.7 1.7E-18 5.8E-23 123.7 3.0 59 181-239 4-62 (64)
2 1wep_A PHF8; structural genomi 99.6 1E-15 3.5E-20 113.9 5.0 54 182-236 11-64 (79)
3 1wew_A DNA-binding family prot 99.6 8.2E-16 2.8E-20 114.4 3.5 57 180-238 13-75 (78)
4 3kqi_A GRC5, PHD finger protei 99.6 3.3E-16 1.1E-20 115.7 0.1 52 185-236 11-62 (75)
5 2vpb_A Hpygo1, pygopus homolog 99.6 1.7E-16 5.8E-21 115.1 -1.4 54 181-234 6-65 (65)
6 1wee_A PHD finger family prote 99.5 1.2E-15 4.1E-20 111.7 2.1 55 180-236 13-67 (72)
7 1wem_A Death associated transc 99.5 9.4E-16 3.2E-20 113.1 0.2 54 182-237 15-72 (76)
8 2kgg_A Histone demethylase jar 99.5 2.5E-15 8.5E-20 103.9 2.2 49 184-233 3-52 (52)
9 3o70_A PHD finger protein 13; 99.5 9.3E-15 3.2E-19 106.6 2.7 51 181-235 17-67 (68)
10 3o7a_A PHD finger protein 13 v 99.5 1.6E-14 5.5E-19 99.8 2.6 49 183-234 3-51 (52)
11 2xb1_A Pygopus homolog 2, B-ce 99.5 5.5E-15 1.9E-19 116.0 -0.0 54 183-236 3-62 (105)
12 1weu_A Inhibitor of growth fam 99.5 1.3E-13 4.4E-18 106.2 7.3 52 181-238 34-88 (91)
13 2rsd_A E3 SUMO-protein ligase 99.4 1.9E-14 6.5E-19 104.4 2.5 54 182-237 9-67 (68)
14 2k16_A Transcription initiatio 99.4 2.4E-14 8.1E-19 105.1 2.3 54 181-236 16-69 (75)
15 1wen_A Inhibitor of growth fam 99.4 2.7E-13 9.2E-18 99.7 5.3 52 181-238 14-68 (71)
16 2lv9_A Histone-lysine N-methyl 99.3 7.9E-13 2.7E-17 102.3 5.6 50 183-236 28-77 (98)
17 2ri7_A Nucleosome-remodeling f 99.3 7.2E-14 2.5E-18 116.4 -0.6 54 181-235 6-59 (174)
18 2g6q_A Inhibitor of growth pro 99.3 1.5E-13 5.2E-18 98.6 1.0 50 181-236 9-61 (62)
19 3kv5_D JMJC domain-containing 99.3 9.9E-14 3.4E-18 133.7 -0.4 54 181-235 35-88 (488)
20 3c6w_A P28ING5, inhibitor of g 99.3 2.6E-13 9E-18 96.4 1.1 49 182-236 8-59 (59)
21 2vnf_A ING 4, P29ING4, inhibit 99.3 4.4E-13 1.5E-17 95.3 1.0 49 182-236 9-60 (60)
22 3kv4_A PHD finger protein 8; e 99.2 4.7E-13 1.6E-17 127.8 -0.8 53 184-236 5-57 (447)
23 2jmi_A Protein YNG1, ING1 homo 99.2 2.3E-12 7.7E-17 99.0 1.9 49 180-234 23-75 (90)
24 1x4i_A Inhibitor of growth pro 99.2 1.9E-12 6.5E-17 94.9 -0.9 47 182-234 5-54 (70)
25 3pur_A Lysine-specific demethy 99.0 6.4E-11 2.2E-15 115.0 2.6 44 192-235 51-94 (528)
26 3lqh_A Histone-lysine N-methyl 98.9 1.8E-10 6E-15 98.5 1.3 40 198-237 20-65 (183)
27 1f62_A Transcription factor WS 98.8 2.2E-09 7.4E-14 73.1 3.3 49 185-235 2-50 (51)
28 2l5u_A Chromodomain-helicase-D 98.7 5.9E-09 2E-13 74.0 4.0 51 180-235 8-58 (61)
29 2ku3_A Bromodomain-containing 98.7 1.4E-09 4.8E-14 79.8 0.6 55 182-239 15-70 (71)
30 1mm2_A MI2-beta; PHD, zinc fin 98.7 9.8E-09 3.3E-13 72.8 4.0 53 180-237 6-58 (61)
31 2yql_A PHD finger protein 21A; 98.7 7.6E-09 2.6E-13 72.0 2.6 51 179-234 5-55 (56)
32 2e6r_A Jumonji/ARID domain-con 98.7 4.9E-09 1.7E-13 80.2 1.6 52 182-235 15-66 (92)
33 2l43_A N-teminal domain from h 98.7 2.8E-09 9.7E-14 81.0 0.2 53 182-237 24-77 (88)
34 1xwh_A Autoimmune regulator; P 98.7 7.4E-09 2.5E-13 74.4 2.3 51 182-237 7-57 (66)
35 2yt5_A Metal-response element- 98.6 1.1E-08 3.8E-13 72.9 1.9 57 181-237 4-63 (66)
36 2puy_A PHD finger protein 21A; 98.6 5.7E-09 2E-13 73.5 0.1 50 181-235 3-52 (60)
37 3asl_A E3 ubiquitin-protein li 98.5 6.7E-08 2.3E-12 70.5 4.0 50 185-235 20-69 (70)
38 2lri_C Autoimmune regulator; Z 98.5 9E-08 3.1E-12 69.2 4.0 50 182-236 11-60 (66)
39 2e6s_A E3 ubiquitin-protein li 98.4 7.3E-07 2.5E-11 66.2 7.6 50 184-234 27-76 (77)
40 4gne_A Histone-lysine N-methyl 98.3 4.5E-07 1.5E-11 71.4 3.4 45 182-233 14-60 (107)
41 1wev_A Riken cDNA 1110020M19; 98.2 2.7E-07 9.3E-12 69.9 1.4 54 182-236 15-73 (88)
42 3shb_A E3 ubiquitin-protein li 98.2 9E-07 3.1E-11 65.8 3.7 51 183-234 26-76 (77)
43 3v43_A Histone acetyltransfera 98.2 1.4E-06 4.9E-11 68.1 4.3 50 185-235 63-112 (112)
44 3ask_A E3 ubiquitin-protein li 98.1 1.1E-06 3.8E-11 77.3 3.9 53 182-235 173-225 (226)
45 3rsn_A SET1/ASH2 histone methy 98.1 3.2E-06 1.1E-10 72.0 5.3 50 184-234 6-58 (177)
46 1fp0_A KAP-1 corepressor; PHD 98.1 4.7E-06 1.6E-10 63.6 5.2 50 181-235 23-72 (88)
47 2ysm_A Myeloid/lymphoid or mix 98.0 2.3E-06 8E-11 66.4 2.9 51 185-237 56-106 (111)
48 2kwj_A Zinc finger protein DPF 98.0 1.3E-06 4.6E-11 68.6 1.5 49 185-235 60-108 (114)
49 4bbq_A Lysine-specific demethy 98.0 1.9E-06 6.6E-11 67.1 1.9 51 186-236 62-115 (117)
50 2ysm_A Myeloid/lymphoid or mix 97.7 3.2E-05 1.1E-09 59.9 4.2 50 182-233 6-55 (111)
51 3v43_A Histone acetyltransfera 97.3 4.3E-05 1.5E-09 59.7 1.0 52 182-233 4-62 (112)
52 2kwj_A Zinc finger protein DPF 97.0 0.00015 5E-09 56.8 0.8 50 184-233 2-59 (114)
53 2lbm_A Transcriptional regulat 96.8 0.00059 2E-08 56.1 2.5 52 180-235 60-117 (142)
54 3ql9_A Transcriptional regulat 96.2 0.0015 5E-08 52.9 1.8 52 180-235 54-111 (129)
55 1iym_A EL5; ring-H2 finger, ub 93.8 0.047 1.6E-06 35.7 3.2 47 184-235 6-52 (55)
56 2kiz_A E3 ubiquitin-protein li 93.4 0.051 1.8E-06 37.3 2.8 49 181-235 12-60 (69)
57 2ect_A Ring finger protein 126 91.7 0.18 6E-06 35.3 4.0 48 182-235 14-61 (78)
58 1wil_A KIAA1045 protein; ring 91.6 0.067 2.3E-06 40.6 1.7 51 182-234 14-75 (89)
59 2e61_A Zinc finger CW-type PWW 91.4 0.15 5E-06 37.0 3.3 33 196-231 15-49 (69)
60 2ecm_A Ring finger and CHY zin 91.3 0.099 3.4E-06 34.0 2.1 48 183-235 5-52 (55)
61 2l7p_A Histone-lysine N-methyl 91.1 0.082 2.8E-06 41.0 1.8 35 195-231 24-58 (100)
62 2l0b_A E3 ubiquitin-protein li 90.6 0.1 3.5E-06 38.2 1.8 48 182-235 39-86 (91)
63 2ep4_A Ring finger protein 24; 89.8 0.2 6.8E-06 34.7 2.7 47 183-235 15-61 (74)
64 2d8s_A Cellular modulator of i 89.5 0.21 7.3E-06 36.4 2.8 48 184-234 16-66 (80)
65 1x4j_A Ring finger protein 38; 89.2 0.2 6.9E-06 34.9 2.4 48 182-235 22-69 (75)
66 1v87_A Deltex protein 2; ring- 88.7 0.17 5.7E-06 38.0 1.7 50 185-234 27-90 (114)
67 2ct2_A Tripartite motif protei 86.0 0.57 1.9E-05 33.1 3.2 51 182-235 14-65 (88)
68 2csy_A Zinc finger protein 183 84.1 0.64 2.2E-05 32.8 2.7 46 181-235 13-58 (81)
69 2ysl_A Tripartite motif-contai 83.1 2 7E-05 29.1 4.9 48 182-235 19-66 (73)
70 2yur_A Retinoblastoma-binding 81.0 1.1 3.9E-05 31.1 3.0 48 182-235 14-61 (74)
71 2d8t_A Dactylidin, ring finger 79.7 1.7 5.7E-05 29.8 3.4 45 182-235 14-58 (71)
72 2lq6_A Bromodomain-containing 78.7 1.2 4.3E-05 33.0 2.7 33 181-215 15-49 (87)
73 1bor_A Transcription factor PM 77.8 1.2 4E-05 29.6 2.1 43 181-235 4-46 (56)
74 2ecl_A Ring-box protein 2; RNF 76.4 0.47 1.6E-05 34.0 -0.2 45 186-235 18-73 (81)
75 2egp_A Tripartite motif-contai 76.4 2.1 7.2E-05 29.5 3.2 50 182-235 11-62 (79)
76 2ecj_A Tripartite motif-contai 76.0 1.6 5.5E-05 28.2 2.4 45 182-232 14-58 (58)
77 2ysj_A Tripartite motif-contai 75.7 2.5 8.6E-05 28.0 3.4 45 182-232 19-63 (63)
78 3a1b_A DNA (cytosine-5)-methyl 73.9 1.2 4.2E-05 37.0 1.6 55 178-236 74-135 (159)
79 3dpl_R Ring-box protein 1; ubi 71.7 1.8 6.2E-05 33.0 2.0 46 185-235 39-98 (106)
80 2ecv_A Tripartite motif-contai 71.5 2.4 8.3E-05 29.2 2.5 49 183-235 19-68 (85)
81 2ct0_A Non-SMC element 1 homol 71.4 3 0.0001 30.1 3.0 47 182-234 14-60 (74)
82 2ckl_B Ubiquitin ligase protei 71.2 1.5 5.3E-05 35.0 1.6 47 182-235 53-99 (165)
83 3lrq_A E3 ubiquitin-protein li 70.6 1.6 5.5E-05 32.2 1.5 47 182-235 21-67 (100)
84 2pv0_B DNA (cytosine-5)-methyl 70.0 1.1 3.8E-05 42.1 0.5 54 179-236 89-149 (386)
85 2djb_A Polycomb group ring fin 69.5 2.1 7.2E-05 29.3 1.8 46 182-235 14-59 (72)
86 2ea6_A Ring finger protein 4; 69.5 1.2 4.1E-05 29.8 0.5 50 182-236 14-66 (69)
87 2a20_A Regulating synaptic mem 69.2 2 6.8E-05 30.5 1.6 54 182-236 8-61 (62)
88 2ecw_A Tripartite motif-contai 68.4 5 0.00017 27.6 3.6 49 183-235 19-68 (85)
89 3k1l_B Fancl; UBC, ring, RWD, 67.9 5.5 0.00019 37.3 4.7 54 182-235 307-370 (381)
90 1e4u_A Transcriptional repress 67.8 2.5 8.4E-05 30.4 1.9 49 182-235 10-59 (78)
91 2xeu_A Ring finger protein 4; 64.7 1.5 5.1E-05 28.8 0.2 48 183-235 3-53 (64)
92 3ng2_A RNF4, snurf, ring finge 63.6 1.4 4.6E-05 29.8 -0.2 49 182-235 9-60 (71)
93 1vyx_A ORF K3, K3RING; zinc-bi 62.8 1.6 5.4E-05 30.0 0.0 50 182-235 5-56 (60)
94 2ecy_A TNF receptor-associated 62.7 3.1 0.00011 27.9 1.5 46 182-235 14-59 (66)
95 2ckl_A Polycomb group ring fin 62.0 3 0.0001 30.9 1.5 46 182-235 14-59 (108)
96 4a0k_B E3 ubiquitin-protein li 61.7 2 6.8E-05 33.6 0.4 46 185-235 50-109 (117)
97 1t1h_A Gspef-atpub14, armadill 60.8 4.3 0.00015 28.0 2.0 46 182-235 7-52 (78)
98 1v5n_A PDI-like hypothetical p 60.6 5.1 0.00017 29.7 2.5 37 184-222 48-84 (89)
99 1chc_A Equine herpes virus-1 r 59.8 3.4 0.00012 27.7 1.3 44 184-235 6-49 (68)
100 2y43_A E3 ubiquitin-protein li 59.7 4 0.00014 29.6 1.8 46 182-235 21-66 (99)
101 3ztg_A E3 ubiquitin-protein li 59.0 4 0.00014 29.0 1.7 49 181-235 11-59 (92)
102 1jm7_A BRCA1, breast cancer ty 58.4 3 0.0001 30.6 0.9 47 183-235 21-67 (112)
103 3nw0_A Non-structural maintena 56.9 5.5 0.00019 34.5 2.5 47 182-234 179-225 (238)
104 2ecn_A Ring finger protein 141 55.9 2.6 8.8E-05 28.5 0.2 42 183-234 15-56 (70)
105 1zbd_B Rabphilin-3A; G protein 55.4 5.7 0.00019 31.8 2.1 53 182-235 54-107 (134)
106 4ayc_A E3 ubiquitin-protein li 54.0 3.9 0.00013 31.8 1.0 43 184-235 54-96 (138)
107 3l11_A E3 ubiquitin-protein li 53.0 6.3 0.00022 29.3 2.0 45 183-235 15-59 (115)
108 3fl2_A E3 ubiquitin-protein li 49.4 4.3 0.00015 30.8 0.5 45 183-235 52-96 (124)
109 4ap4_A E3 ubiquitin ligase RNF 42.9 5.8 0.0002 29.5 0.3 48 183-235 72-122 (133)
110 1weq_A PHD finger protein 7; s 40.5 30 0.001 25.8 3.9 34 197-234 44-78 (85)
111 2vrw_B P95VAV, VAV1, proto-onc 39.4 23 0.00078 31.8 3.8 37 181-217 355-392 (406)
112 1e8j_A Rubredoxin; iron-sulfur 38.1 18 0.00061 24.4 2.2 13 224-236 34-46 (52)
113 1k81_A EIF-2-beta, probable tr 37.9 8.3 0.00028 24.1 0.4 24 185-208 2-30 (36)
114 3hct_A TNF receptor-associated 37.9 11 0.00039 28.2 1.3 46 182-235 17-62 (118)
115 1ptq_A Protein kinase C delta 37.5 27 0.00093 22.1 2.9 36 182-217 10-46 (50)
116 1g25_A CDK-activating kinase a 37.3 8.4 0.00029 25.6 0.4 49 183-235 3-52 (65)
117 2pk7_A Uncharacterized protein 36.6 19 0.00064 25.6 2.2 31 182-212 7-39 (69)
118 2js4_A UPF0434 protein BB2007; 36.3 16 0.00054 26.1 1.7 31 182-212 7-39 (70)
119 2fiy_A Protein FDHE homolog; F 36.0 13 0.00043 33.7 1.4 30 182-211 181-220 (309)
120 2hf1_A Tetraacyldisaccharide-1 35.2 17 0.00058 25.8 1.7 30 183-212 8-39 (68)
121 2fnf_X Putative RAS effector N 34.5 30 0.001 24.4 3.0 35 182-218 34-68 (72)
122 2jr6_A UPF0434 protein NMA0874 34.4 18 0.00061 25.7 1.7 31 182-212 7-39 (68)
123 1jm7_B BARD1, BRCA1-associated 34.1 19 0.00065 26.8 2.0 44 182-235 21-64 (117)
124 6rxn_A Rubredoxin; electron tr 33.5 24 0.00082 23.3 2.1 13 224-236 28-40 (46)
125 2yuu_A NPKC-delta, protein kin 33.3 38 0.0013 24.2 3.4 36 182-217 27-63 (83)
126 1faq_A RAF-1; transferase, ser 32.9 25 0.00085 22.6 2.2 34 182-218 13-46 (52)
127 2enn_A NPKC-theta, protein kin 32.6 36 0.0012 24.0 3.2 38 181-218 32-70 (77)
128 1nee_A EIF-2-beta, probable tr 32.2 19 0.00063 29.0 1.7 24 184-207 103-131 (138)
129 2enz_A NPKC-theta, protein kin 31.7 37 0.0013 23.0 3.0 36 182-217 22-58 (65)
130 1z6u_A NP95-like ring finger p 31.6 18 0.00062 28.6 1.6 46 182-235 77-122 (150)
131 2eli_A Protein kinase C alpha 30.7 46 0.0016 23.9 3.5 36 182-217 27-63 (85)
132 2jny_A Uncharacterized BCR; st 30.5 26 0.00087 24.9 2.0 31 182-212 9-41 (67)
133 2d74_B Translation initiation 30.3 19 0.00066 29.3 1.5 24 184-207 105-133 (148)
134 2xzl_A ATP-dependent helicase 28.6 27 0.00094 35.0 2.6 30 182-213 10-39 (802)
135 2zet_C Melanophilin; complex, 28.6 14 0.00047 30.1 0.4 50 182-235 67-117 (153)
136 1rmd_A RAG1; V(D)J recombinati 27.9 22 0.00074 26.3 1.3 46 182-235 22-67 (116)
137 1dx8_A Rubredoxin; electron tr 27.2 40 0.0014 24.0 2.6 45 182-236 6-50 (70)
138 1kbe_A Kinase suppressor of RA 26.9 34 0.0012 22.6 2.0 31 184-217 15-45 (49)
139 2lcq_A Putative toxin VAPC6; P 26.9 62 0.0021 25.6 4.0 16 96-111 85-100 (165)
140 2l6l_A DNAJ homolog subfamily 26.3 17 0.00056 28.8 0.4 29 182-211 111-145 (155)
141 3cw2_K Translation initiation 25.7 20 0.00067 28.9 0.8 25 183-207 103-132 (139)
142 1y8f_A UNC-13 homolog A, MUNC1 25.6 40 0.0014 23.0 2.3 36 182-217 23-59 (66)
143 1yk4_A Rubredoxin, RD; electro 25.2 50 0.0017 22.1 2.6 13 224-236 33-45 (52)
144 3hcs_A TNF receptor-associated 25.1 28 0.00097 27.5 1.6 45 182-234 17-61 (170)
145 3uk3_C Zinc finger protein 217 24.6 54 0.0018 19.9 2.6 9 226-234 32-40 (57)
146 2k5c_A Uncharacterized protein 24.4 21 0.00072 26.9 0.7 21 106-126 61-81 (95)
147 2yt9_A Zinc finger-containing 24.2 27 0.00092 23.7 1.2 53 183-235 7-74 (95)
148 3uej_A NPKC-delta, protein kin 24.2 49 0.0017 22.3 2.5 36 182-217 19-55 (65)
149 2jne_A Hypothetical protein YF 23.7 34 0.0012 26.4 1.7 51 184-234 33-89 (101)
150 2e2z_A TIM15; protein import, 23.3 18 0.00062 27.9 0.1 25 184-208 14-47 (100)
151 2jr7_A DPH3 homolog; DESR1, CS 23.1 22 0.00077 26.7 0.6 27 184-211 24-57 (89)
152 1rfh_A RAS association (ralgds 23.0 36 0.0012 22.9 1.6 35 182-218 21-55 (59)
153 3l9k_W Dynein intermediate cha 22.9 34 0.0012 21.9 1.4 24 12-35 13-37 (38)
154 3knv_A TNF receptor-associated 22.4 23 0.00078 27.8 0.6 45 182-234 30-74 (141)
155 2kpi_A Uncharacterized protein 22.4 31 0.0011 23.4 1.2 31 182-212 9-41 (56)
156 4gne_A Histone-lysine N-methyl 22.3 90 0.0031 23.8 3.9 29 200-229 70-98 (107)
157 2yum_A ZZZ3 protein, zinc fing 22.1 66 0.0023 22.2 2.9 37 88-125 19-61 (75)
158 2kn9_A Rubredoxin; metalloprot 21.7 54 0.0019 24.1 2.4 45 182-236 26-70 (81)
159 2db6_A SH3 and cysteine rich d 21.6 22 0.00075 25.0 0.3 37 181-217 26-63 (74)
160 2akl_A PHNA-like protein PA012 21.4 36 0.0012 27.5 1.5 25 184-208 28-54 (138)
161 1yop_A KTI11P; zinc finger, me 21.0 23 0.00078 26.2 0.3 27 184-211 24-57 (83)
162 1weo_A Cellulose synthase, cat 21.0 37 0.0013 25.8 1.4 51 182-236 15-68 (93)
163 1s24_A Rubredoxin 2; electron 21.0 56 0.0019 24.4 2.4 45 182-236 34-78 (87)
164 2kre_A Ubiquitin conjugation f 20.9 1E+02 0.0036 22.5 4.0 46 181-235 27-72 (100)
165 1bbo_A Human enhancer-binding 20.5 69 0.0024 19.3 2.5 9 226-234 29-37 (57)
166 2dlq_A GLI-kruppel family memb 20.4 58 0.002 22.9 2.4 13 198-210 65-77 (124)
167 2v3b_B Rubredoxin 2, rubredoxi 20.1 70 0.0024 21.6 2.6 13 224-236 34-46 (55)
No 1
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.72 E-value=1.7e-18 Score=123.73 Aligned_cols=59 Identities=71% Similarity=1.430 Sum_probs=52.5
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccCCC
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGRQ 239 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~r~ 239 (239)
.+..+|++|+++|+++++|||||.|+.|||+.|||++...++.++.|+|+.|..|++|+
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~~ 62 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGPS 62 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCSS
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCCCC
Confidence 35568999999998789999999999999999999998777667889999999999874
No 2
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.58 E-value=1e-15 Score=113.91 Aligned_cols=54 Identities=39% Similarity=0.978 Sum_probs=47.2
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
...+| +|+++++++++|||||.|+.|||+.|||++...+..++.|+|+.|..++
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 44556 9999997788999999999999999999999877667899999999654
No 3
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.57 E-value=8.2e-16 Score=114.43 Aligned_cols=57 Identities=23% Similarity=0.616 Sum_probs=46.8
Q ss_pred cCCCceecccCCCCCCCCCeEecc--CCCCeeeccccccCcccc----CCCCcEEcCCCccccCC
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITPAKA----ENIKQYKCPSCSMKRGR 238 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~CVgit~~~a----~~i~~y~Cp~C~~Kr~r 238 (239)
+....+| +|+++.+ +++||||| .|..|||+.||||+...+ ..+++|+|+.|..++.+
T Consensus 13 ~~~~~~C-iC~~~~~-~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 13 PEIKVRC-VCGNSLE-TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCCCC-SSCCCCC-CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCCCEEe-ECCCcCC-CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 3455666 9999954 67999999 999999999999998754 45678999999977654
No 4
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.55 E-value=3.3e-16 Score=115.69 Aligned_cols=52 Identities=37% Similarity=0.951 Sum_probs=45.4
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
++|+|+++++++++|||||.|+.|||+.|||++...+..++.|+|+.|..+.
T Consensus 11 ~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 11 VYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred eEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 4449999987789999999999999999999998877666789999998643
No 5
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.55 E-value=1.7e-16 Score=115.05 Aligned_cols=54 Identities=28% Similarity=0.680 Sum_probs=44.8
Q ss_pred CCCceecccCCCCCCCCCeEecc-CCCCeeeccccccCccccCCC-----CcEEcCCCcc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENI-----KQYKCPSCSM 234 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD-~C~~WfH~~CVgit~~~a~~i-----~~y~Cp~C~~ 234 (239)
.....|++|+++|+++.+||+|| .|++|||+.||||+...++.+ ..|+|+.|.+
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCccC
Confidence 34567999999999899999999 999999999999998765443 3899999963
No 6
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.54 E-value=1.2e-15 Score=111.69 Aligned_cols=55 Identities=27% Similarity=0.640 Sum_probs=45.1
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
+.+..+| +|+++++++.+|||||.|+.|||+.|||++...+ .+..|+|+.|..++
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~-~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA-LPSKFLCFRCIELS 67 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC-CCSCCCCHHHHHHC
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc-CCCcEECCCccCCC
Confidence 3455666 9999987667999999999999999999986533 35789999998654
No 7
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.52 E-value=9.4e-16 Score=113.11 Aligned_cols=54 Identities=43% Similarity=1.020 Sum_probs=44.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccC----CCCcEEcCCCccccC
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE----NIKQYKCPSCSMKRG 237 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~----~i~~y~Cp~C~~Kr~ 237 (239)
+..+| +|+++++ +++|||||.|+.|||+.|||++...+. ....|+|+.|..++.
T Consensus 15 ~~~~C-~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 15 NALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp TCCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCCEE-ECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 44556 9999986 679999999999999999999976542 236799999987653
No 8
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.52 E-value=2.5e-15 Score=103.92 Aligned_cols=49 Identities=35% Similarity=0.905 Sum_probs=42.2
Q ss_pred ceecccCCCCCCCCCeEecc-CCCCeeeccccccCccccCCCCcEEcCCCc
Q 026373 184 TLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENIKQYKCPSCS 233 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD-~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~ 233 (239)
.-|++|+++|+++++||+|| .|+.|||+.|||++...+.. .+|+|+.|+
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~-~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAEN-EDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHH-SCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCC-CCEECCCCC
Confidence 35789999998889999999 89999999999999875543 679999995
No 9
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.48 E-value=9.3e-15 Score=106.60 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=42.8
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..+| +|+++++ +++|||||.|+.|||+.|||++...+ ++.|+|+.|...
T Consensus 17 ~~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~--~~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSC--CSSCCCHHHHTC
T ss_pred CCceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccC--CCcEECCCCCCC
Confidence 344556 9999986 78999999999999999999998644 368999999764
No 10
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.46 E-value=1.6e-14 Score=99.75 Aligned_cols=49 Identities=22% Similarity=0.609 Sum_probs=41.6
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
+.+.|+|+++++ +++|||||.|+.|||+.|||++...++ +.|+|+.|..
T Consensus 3 d~~~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~~~--~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVP--EVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGGGCC--SSCCCHHHHT
T ss_pred cCeEEEeCCcCC-CCCEEEcCCCCccccccccCCCcccCC--CcEECcCCCC
Confidence 344559999986 789999999999999999999987543 6899999964
No 11
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.46 E-value=5.5e-15 Score=115.96 Aligned_cols=54 Identities=28% Similarity=0.708 Sum_probs=46.4
Q ss_pred CceecccCCCCCCCCCeEecc-CCCCeeeccccccCccccCCC-----CcEEcCCCcccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENI-----KQYKCPSCSMKR 236 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD-~C~~WfH~~CVgit~~~a~~i-----~~y~Cp~C~~Kr 236 (239)
...|++|+++|++++.||+|| .|+.|||+.|||++...++.+ ..|+||.|..++
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 457999999998888999998 999999999999998655433 789999998654
No 12
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.45 E-value=1.3e-13 Score=106.15 Aligned_cols=52 Identities=37% Similarity=0.804 Sum_probs=41.9
Q ss_pred CCCceecccCCCCCCCCCeEeccC--CC-CeeeccccccCccccCCCCcEEcCCCccccCC
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 238 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~--C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~r 238 (239)
....+| +|+++++ ++||+||. |. .|||+.|||++.... .+|+|+.|..++.|
T Consensus 34 ~e~~yC-iC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~p~---g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 34 NEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQESGP 88 (91)
T ss_dssp CCCBCS-TTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSCCC---SSCCCTTTCCCCSS
T ss_pred CCCcEE-ECCCCCC--CCEeEecCCCCCCCCEecccCCcCcCCC---CCEECcCccCcCCc
Confidence 445556 9999874 58999999 76 899999999987542 57999999976654
No 13
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.45 E-value=1.9e-14 Score=104.43 Aligned_cols=54 Identities=26% Similarity=0.659 Sum_probs=42.7
Q ss_pred CCceecccCCCCCCCCCeEeccC--CCCeeeccccccCccccCC---CCcEEcCCCccccC
Q 026373 182 SETLCGSCGGNYNADEFWIGCDI--CERWFHGKCVKITPAKAEN---IKQYKCPSCSMKRG 237 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~--C~~WfH~~CVgit~~~a~~---i~~y~Cp~C~~Kr~ 237 (239)
..++| +|+.+++ +++||+||. |+.|||+.|||++...+.. +++|+|+.|+.+|+
T Consensus 9 ~~v~C-~C~~~~~-~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r~ 67 (68)
T 2rsd_A 9 AKVRC-ICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSRA 67 (68)
T ss_dssp CEECC-TTCCCSC-CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHHT
T ss_pred CCEEe-ECCCCcC-CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCccc
Confidence 33455 9999875 679999994 9999999999998765433 25799999987664
No 14
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.44 E-value=2.4e-14 Score=105.08 Aligned_cols=54 Identities=35% Similarity=0.786 Sum_probs=45.0
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
.+..+|.+|+++++ +++||+||.|+.|||+.|+|++...++. ..|+|+.|..+.
T Consensus 16 ~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~-~~w~C~~C~~~~ 69 (75)
T 2k16_A 16 NQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEE-MQWFCPKCANKI 69 (75)
T ss_dssp CEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSS-SCCCCTTTHHHH
T ss_pred CCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCC-CCEEChhccCch
Confidence 45567989999985 6789999999999999999998765543 679999998653
No 15
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.39 E-value=2.7e-13 Score=99.68 Aligned_cols=52 Identities=37% Similarity=0.804 Sum_probs=41.7
Q ss_pred CCCceecccCCCCCCCCCeEeccC--CC-CeeeccccccCccccCCCCcEEcCCCccccCC
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 238 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~--C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~r 238 (239)
.+..+| +|++++. ++||+||. |. .|||+.|||++.... .+|+|+.|..++.|
T Consensus 14 ~~~~~C-~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~~p~---g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 14 NEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQESGP 68 (71)
T ss_dssp TSCCCS-TTCCCSC--SSEECCSCSSCSCCCEETTTTTCSSCCS---SCCCCTTTSSCSSS
T ss_pred CCCCEE-ECCCCCC--CCEeEeeCCCCCCccEecccCCcCcCCC---CCEECCCCCccccc
Confidence 345566 9999874 58999999 77 799999999987542 57999999976544
No 16
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.35 E-value=7.9e-13 Score=102.32 Aligned_cols=50 Identities=32% Similarity=0.749 Sum_probs=41.6
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
.+.| +|+.+++ +++||+||.|..|||..|++++...++ +.|+|+.|..++
T Consensus 28 ~vrC-iC~~~~~-~~~mi~Cd~C~~w~H~~C~~~~~~~~p--~~w~C~~C~~~~ 77 (98)
T 2lv9_A 28 VTRC-ICGFTHD-DGYMICCDKCSVWQHIDCMGIDRQHIP--DTYLCERCQPRN 77 (98)
T ss_dssp BCCC-TTSCCSC-SSCEEEBTTTCBEEETTTTTCCTTSCC--SSBCCTTTSSSC
T ss_pred CEEe-ECCCccC-CCcEEEcCCCCCcCcCcCCCCCccCCC--CCEECCCCcCCC
Confidence 3456 9999875 689999999999999999999865544 579999998654
No 17
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.34 E-value=7.2e-14 Score=116.35 Aligned_cols=54 Identities=39% Similarity=1.038 Sum_probs=46.5
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..+| +|+++++++++|||||.|+.|||+.|+|++...+...+.|+|+.|..+
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 355677 999998778899999999999999999999876666788999999864
No 18
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.34 E-value=1.5e-13 Score=98.55 Aligned_cols=50 Identities=34% Similarity=0.762 Sum_probs=39.6
Q ss_pred CCCceecccCCCCCCCCCeEeccC--CC-CeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~--C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
.+..+| +|+++++ ++||+||. |. .|||+.|||++... ..+|+||.|..+|
T Consensus 9 ~e~~yC-~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 9 NEPTYC-LCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYKP---KGKWYCPKCRGDN 61 (62)
T ss_dssp -CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC---SSCCCCHHHHTCC
T ss_pred CCCcEE-ECCCCCC--CCeeeeeCCCCCcccEecccCCcCcCC---CCCEECcCcccCC
Confidence 344555 9999864 58999999 54 99999999998653 3679999998765
No 19
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.33 E-value=9.9e-14 Score=133.67 Aligned_cols=54 Identities=39% Similarity=1.039 Sum_probs=46.6
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..+| +|+++++++++|||||.|+.|||+.|||++...+..+++|+|+.|..+
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 344455 999999778999999999999999999999887766788999999854
No 20
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.31 E-value=2.6e-13 Score=96.35 Aligned_cols=49 Identities=35% Similarity=0.812 Sum_probs=39.4
Q ss_pred CCceecccCCCCCCCCCeEeccC--CC-CeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~--C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
+..+| +|+++++ ++||+||. |. .|||+.|||++..+. ++|+||.|..+|
T Consensus 8 e~~yC-~C~~~~~--g~mi~CD~~~C~~~wfH~~Cvgl~~~p~---~~w~Cp~C~~~r 59 (59)
T 3c6w_A 8 EPTYC-LCHQVSY--GEMIGCDNPDCPIEWFHFACVDLTTKPK---GKWFCPRCVQEK 59 (59)
T ss_dssp CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCCS---SCCCCHHHHCC-
T ss_pred CCcEE-ECCCCCC--CCeeEeeCCCCCCCCEecccCCcccCCC---CCEECcCccCcC
Confidence 34455 9999874 58999999 77 799999999987643 579999998765
No 21
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.29 E-value=4.4e-13 Score=95.33 Aligned_cols=49 Identities=39% Similarity=0.840 Sum_probs=38.4
Q ss_pred CCceecccCCCCCCCCCeEeccC--CC-CeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~--C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
+..+| +|+++++ ++||+||. |. .|||+.|||++..+. .+|+|+.|..+|
T Consensus 9 e~~~C-~C~~~~~--g~mi~CD~cdC~~~wfH~~Cvgl~~~p~---g~w~C~~C~~~r 60 (60)
T 2vnf_A 9 EPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQER 60 (60)
T ss_dssp CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCCS---SCCCCHHHHC--
T ss_pred CCCEE-ECCCcCC--CCEEEeCCCCCCCceEehhcCCCCcCCC---CCEECcCccCcC
Confidence 44555 9999874 68999999 65 899999999987542 579999998765
No 22
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.25 E-value=4.7e-13 Score=127.85 Aligned_cols=53 Identities=38% Similarity=0.973 Sum_probs=46.6
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
.++|+|+++++++++|||||.|+.|||+.|||++...+..+++|+|+.|..+.
T Consensus 5 ~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 34559999997789999999999999999999999887777899999998643
No 23
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.22 E-value=2.3e-12 Score=99.04 Aligned_cols=49 Identities=27% Similarity=0.631 Sum_probs=39.0
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCC---CeeeccccccCccccCCCCcEEcCC-Ccc
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICE---RWFHGKCVKITPAKAENIKQYKCPS-CSM 234 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~---~WfH~~CVgit~~~a~~i~~y~Cp~-C~~ 234 (239)
+++..+| +|++++. ++||+||.|+ .|||+.||||+.... ..|+|+. |..
T Consensus 23 ~~~~~yC-iC~~~~~--g~MI~CD~c~C~~eWfH~~CVgl~~~p~---~~W~Cp~cC~~ 75 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSY--GPMVACDNPACPFEWFHYGCVGLKQAPK---GKWYCSKDCKE 75 (90)
T ss_dssp -CCSCCS-TTTCCCS--SSEECCCSSSCSCSCEETTTSSCSSCTT---SCCCSSHHHHH
T ss_pred CCCCcEE-EeCCCCC--CCEEEecCCCCccccCcCccCCCCcCCC---CCccCChhhcc
Confidence 3445566 9999874 4799999977 999999999987543 5799999 973
No 24
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.9e-12 Score=94.90 Aligned_cols=47 Identities=34% Similarity=0.772 Sum_probs=38.2
Q ss_pred CCceecccCCCCCCCCCeEeccCCC---CeeeccccccCccccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICE---RWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~---~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
+..+| +|++++. ++||+||.|+ .|||+.|||++... ...|+|+.|..
T Consensus 5 ~~~yC-~C~~~~~--g~MI~CD~cdC~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~ 54 (70)
T 1x4i_A 5 SSGYC-ICNQVSY--GEMVGCDNQDCPIEWFHYGCVGLTEAP---KGKWYCPQCTA 54 (70)
T ss_dssp CCCCS-TTSCCCC--SSEECCSCTTCSCCCEEHHHHTCSSCC---SSCCCCHHHHH
T ss_pred CCeEE-EcCCCCC--CCEeEeCCCCCCccCCcccccccCcCC---CCCEECCCCCc
Confidence 34455 9999863 4999999985 99999999998753 46799999984
No 25
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.02 E-value=6.4e-11 Score=115.01 Aligned_cols=44 Identities=30% Similarity=0.777 Sum_probs=39.5
Q ss_pred CCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 192 NYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 192 ~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
..+++.+||+||.|+.|||+.|||++...++.+++|+||.|..+
T Consensus 51 ~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 51 HKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp TTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred CCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 34468999999999999999999999988888899999999864
No 26
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.93 E-value=1.8e-10 Score=98.46 Aligned_cols=40 Identities=28% Similarity=0.773 Sum_probs=32.8
Q ss_pred CeEeccCCCCeeeccccccCccccCCC------CcEEcCCCccccC
Q 026373 198 FWIGCDICERWFHGKCVKITPAKAENI------KQYKCPSCSMKRG 237 (239)
Q Consensus 198 ~mIqCD~C~~WfH~~CVgit~~~a~~i------~~y~Cp~C~~Kr~ 237 (239)
+|||||.|+.|||+.|+|++...++.+ ..|+|+.|..+.+
T Consensus 20 ~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 20 KMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 399999999999999999997544332 2699999998754
No 27
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.81 E-value=2.2e-09 Score=73.10 Aligned_cols=49 Identities=27% Similarity=0.649 Sum_probs=38.8
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.|.+|++..+ ++.||.||.|..|||..|++......+. ..|+|+.|...
T Consensus 2 ~C~vC~~~~~-~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~-g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGE-DDKLILCDECNKAFHLFCLRPALYEVPD-GEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCCSCCS-SCCSCTTTSCC
T ss_pred CCCCCCCCCC-CCCEEECCCCChhhCcccCCCCcCCCCC-CcEECcCcccc
Confidence 5889998864 6799999999999999999644333332 57999999864
No 28
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.75 E-value=5.9e-09 Score=74.00 Aligned_cols=51 Identities=27% Similarity=0.640 Sum_probs=40.6
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..+.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 8 ~~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p~-g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAPE-GKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCCC-SSCCCTTGGGG
T ss_pred CCCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCCC-CceECcccccc
Confidence 3456679999873 489999999999999999985443433 57999999864
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.74 E-value=1.4e-09 Score=79.83 Aligned_cols=55 Identities=22% Similarity=0.556 Sum_probs=44.3
Q ss_pred CCceecccCCCC-CCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccCCC
Q 026373 182 SETLCGSCGGNY-NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGRQ 239 (239)
Q Consensus 182 ~~~~C~~C~~~~-~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~r~ 239 (239)
++..|.+|+... .+++.||.||.|+.|||..|+++.. .+. ..|+|+.|..+++++
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~-g~W~C~~C~~~~~~p 70 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPE-GQWLCRHCLQSRARP 70 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCS-SCCCCHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCC-CCcCCccCcCcCccC
Confidence 456799999875 3367999999999999999999874 222 579999999877664
No 30
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.70 E-value=9.8e-09 Score=72.85 Aligned_cols=53 Identities=23% Similarity=0.603 Sum_probs=41.0
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccC
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 237 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~ 237 (239)
+.++.+|.+|+.. +.||.||.|..+||..|++......+. ..|+|+.|..+..
T Consensus 6 d~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 6 DHHMEFCRVCKDG----GELLCCDTCPSSYHIHCLNPPLPEIPN-GEWLCPRCTCPAL 58 (61)
T ss_dssp CSSCSSCTTTCCC----SSCBCCSSSCCCBCSSSSSSCCSSCCS-SCCCCTTTTTTCC
T ss_pred cCCCCcCCCCCCC----CCEEEcCCCCHHHcccccCCCcCcCCC-CccCChhhcCchh
Confidence 3456679999863 489999999999999999954433333 5799999997654
No 31
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=7.6e-09 Score=72.01 Aligned_cols=51 Identities=24% Similarity=0.611 Sum_probs=39.4
Q ss_pred ccCCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 179 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 179 ee~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
.+.++.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..
T Consensus 5 ~~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~-g~W~C~~C~~ 55 (56)
T 2yql_A 5 SSGHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQD 55 (56)
T ss_dssp CCSSCCSCSSSCCS----SCCEECSSSSCEECSSSSSSCCCSCCC-SSCCCHHHHC
T ss_pred cCCCCCCCccCCCC----CeEEEcCCCCcceECccCCCCcCCCCC-CceEChhhhC
Confidence 34456679999875 489999999999999999954333332 5799999964
No 32
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=4.9e-09 Score=80.22 Aligned_cols=52 Identities=21% Similarity=0.570 Sum_probs=41.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+...|.+|+...+ .+.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 15 ~~~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~-g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLPEIPR-GIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCSSCCS-SCCCCHHHHHH
T ss_pred CCCCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcccCCC-CCcCCccCcCc
Confidence 4457999998864 5789999999999999999954333333 57999999853
No 33
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.66 E-value=2.8e-09 Score=80.98 Aligned_cols=53 Identities=21% Similarity=0.549 Sum_probs=41.9
Q ss_pred CCceecccCCCC-CCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccC
Q 026373 182 SETLCGSCGGNY-NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 237 (239)
Q Consensus 182 ~~~~C~~C~~~~-~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~ 237 (239)
++..|.+|+... .+++.||.||.|..|||..|+++... +. ..|+|+.|..+..
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~v--P~-g~W~C~~C~~~~~ 77 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYI--PE-GQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSC--CS-SCCCCHHHHHHTT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCcc--CC-CceECccccCccc
Confidence 446799999875 23568999999999999999998742 22 5799999986543
No 34
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.66 E-value=7.4e-09 Score=74.41 Aligned_cols=51 Identities=27% Similarity=0.559 Sum_probs=39.9
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccC
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 237 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~ 237 (239)
++.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..++.
T Consensus 7 ~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~ppl~~~P~-g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 7 NEDECAVCRDG----GELICCDGCPRAFHLACLSPPLREIPS-GTWRCSSCLQATV 57 (66)
T ss_dssp CCCSBSSSSCC----SSCEECSSCCCEECTTTSSSCCSSCCS-SCCCCHHHHHTCC
T ss_pred CCCCCccCCCC----CCEEEcCCCChhhcccccCCCcCcCCC-CCeECccccCccc
Confidence 55679999864 479999999999999999954333333 5799999997654
No 35
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.60 E-value=1.1e-08 Score=72.85 Aligned_cols=57 Identities=21% Similarity=0.498 Sum_probs=42.7
Q ss_pred CCCceecccCCCCC-CCCCeEeccCCCCeeeccccccCccc--cCCCCcEEcCCCccccC
Q 026373 181 HSETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKITPAK--AENIKQYKCPSCSMKRG 237 (239)
Q Consensus 181 ~~~~~C~~C~~~~~-~d~~mIqCD~C~~WfH~~CVgit~~~--a~~i~~y~Cp~C~~Kr~ 237 (239)
.++.+|.+|+..+. +++.||.||.|..+||..|++..... ......|+|+.|..+.+
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 35567999998742 35799999999999999999974322 11125799999986553
No 36
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.59 E-value=5.7e-09 Score=73.51 Aligned_cols=50 Identities=24% Similarity=0.623 Sum_probs=39.1
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.++.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 3 ~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC----SSCEECSSSSCEECGGGSSSCCSSCCC-SCCCCHHHHHH
T ss_pred CCCCCCcCCCCC----CcEEEcCCCCcCEECCcCCCCcCCCCC-CceEChhccCh
Confidence 355679999874 489999999999999999954333332 57999999854
No 37
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.51 E-value=6.7e-08 Score=70.46 Aligned_cols=50 Identities=26% Similarity=0.650 Sum_probs=38.3
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.|.+|++..+ ++.||.||.|+.|||..|++......+....|+|+.|..+
T Consensus 20 ~C~~C~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSC-GGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCC-CCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 5667888754 6799999999999999999944333333227999999864
No 38
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.48 E-value=9e-08 Score=69.21 Aligned_cols=50 Identities=26% Similarity=0.551 Sum_probs=38.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
....|.+|+.. +.||.||.|..+||..|+.......+. ..|+|+.|...+
T Consensus 11 ~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~-g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCS-SSCCCTTTTTCC
T ss_pred CCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCC-CCEECccccCCC
Confidence 44569999853 469999999999999999754433332 569999998643
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=7.3e-07 Score=66.22 Aligned_cols=50 Identities=28% Similarity=0.648 Sum_probs=38.9
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
..|.+|++..+ ++.||.||.|..+||..|++......+....|+|+.|..
T Consensus 27 c~C~vC~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHE-PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCC-STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCC-CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 37889998754 679999999999999999994433333322799999974
No 40
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.26 E-value=4.5e-07 Score=71.41 Aligned_cols=45 Identities=27% Similarity=0.653 Sum_probs=35.5
Q ss_pred CCceecccCCCCCCCCCeEecc--CCCCeeeccccccCccccCCCCcEEcCCCc
Q 026373 182 SETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITPAKAENIKQYKCPSCS 233 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~ 233 (239)
++.+|.+|+. ++.||.|| .|..|||..|++++..+ ...|+||.|.
T Consensus 14 ~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~L~~~P---~g~W~Cp~c~ 60 (107)
T 4gne_A 14 HEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPP---YGKWECPWHQ 60 (107)
T ss_dssp SCSSCTTTCC----CSEEEECCSTTCCCEECTGGGTCSSCC---SSCCCCGGGB
T ss_pred CCCCCCcCCC----CCcEeEECCCCCCcccccccCcCCcCC---CCCEECCCCC
Confidence 4456888883 45899999 89999999999976543 2569999775
No 41
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.22 E-value=2.7e-07 Score=69.86 Aligned_cols=54 Identities=19% Similarity=0.416 Sum_probs=41.5
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccCccc----cCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITPAK----AENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit~~~----a~~i~~y~Cp~C~~Kr 236 (239)
.+.+|.+|+..... ++.||.||.|...||..|.+..... .+ ...|+|+.|..+.
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p-~g~W~C~~C~~~~ 73 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDP-RLVWYCARCTRQM 73 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCT-TCCCCCHHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCC-CCCeeCccccchh
Confidence 56689999987543 4689999999999999999965331 22 2579999998543
No 42
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.19 E-value=9e-07 Score=65.80 Aligned_cols=51 Identities=25% Similarity=0.619 Sum_probs=38.0
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
...|.+|++..+ .+.||.||.|+.+||..|++......+..+.|+|+.|+.
T Consensus 26 ~C~C~vC~~~~d-~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 26 VCACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSBTTTCCCSC-GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCcCCccCCCCC-CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 345777887764 678999999999999999995433344333499999974
No 43
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.16 E-value=1.4e-06 Score=68.13 Aligned_cols=50 Identities=24% Similarity=0.584 Sum_probs=37.9
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+|.+|+....+++.+|.||.|+.+||..|+.......+. ..|+|+.|+.|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~-~~W~C~~C~~k 112 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPK-GMWICQICRPR 112 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCS-SCCCCTTTSCC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCC-CCeECCCCCCc
Confidence 577778765446789999999999999999643333332 47999999865
No 44
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.15 E-value=1.1e-06 Score=77.34 Aligned_cols=53 Identities=25% Similarity=0.597 Sum_probs=36.4
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|.+|+...+ ++.|+.||.|..+||..|++......+....|+|+.|...
T Consensus 173 ~~c~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 173 RVCACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TTTSCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCCCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 3457999998764 6789999999999999999954333333227999999753
No 45
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=98.08 E-value=3.2e-06 Score=71.97 Aligned_cols=50 Identities=18% Similarity=0.467 Sum_probs=35.3
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCC---CcEEcCCCcc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENI---KQYKCPSCSM 234 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i---~~y~Cp~C~~ 234 (239)
.+| .||.+.+-+..|+||+.|..|||..|++......... =.|.|..|..
T Consensus 6 ~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 6 GSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp ------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred eEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 455 9999887788999999999999999999654322211 1578999986
No 46
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.05 E-value=4.7e-06 Score=63.62 Aligned_cols=50 Identities=24% Similarity=0.550 Sum_probs=37.9
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.++..|.+|+.. +.+|.||.|...||..|+.......+. ..|+|+.|...
T Consensus 23 ~n~~~C~vC~~~----g~LL~CD~C~~~fH~~Cl~PpL~~~P~-g~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKP----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSS----SCCEECTTSSCEECTTSSSTTCCCCCS-SSCCCCSCCCC
T ss_pred CCCCcCcCcCCC----CCEEECCCCCCceecccCCCCCCCCcC-CCcCCccccCC
Confidence 455679999975 369999999999999999543332332 57999999854
No 47
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.01 E-value=2.3e-06 Score=66.39 Aligned_cols=51 Identities=22% Similarity=0.610 Sum_probs=39.2
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccccC
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 237 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr~ 237 (239)
+|.+|++..+ +..|+.||.|+++||..|++......+. ..|+|+.|...+.
T Consensus 56 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 56 VCQNCKQSGE-DSKMLVCDTCDKGYHTFCLQPVMKSVPT-NGWKCKNCRICIS 106 (111)
T ss_dssp CCTTTCCCSC-CTTEEECSSSCCEEEGGGSSSCCSSCCS-SCCCCHHHHCCSC
T ss_pred cccccCccCC-CCCeeECCCCCcHHhHHhcCCccccCCC-CCcCCcCCcCcCC
Confidence 5777888764 5689999999999999999854333333 5799999986543
No 48
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.01 E-value=1.3e-06 Score=68.58 Aligned_cols=49 Identities=29% Similarity=0.586 Sum_probs=37.7
Q ss_pred eecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.|.+|++..+ ++.||.||.|+.+||..|++......+. ..|+|+.|...
T Consensus 60 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 SCILCGTSEN-DDQLLFCDDCDRGYHMYCLNPPVAEPPE-GSWSCHLCWEL 108 (114)
T ss_dssp CCTTTTCCTT-TTTEEECSSSCCEEETTTSSSCCSSCCS-SCCCCHHHHHH
T ss_pred ccCcccccCC-CCceEEcCCCCccccccccCCCccCCCC-CCeECccccch
Confidence 4777887754 6789999999999999999943333332 57999999753
No 49
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.98 E-value=1.9e-06 Score=67.15 Aligned_cols=51 Identities=18% Similarity=0.451 Sum_probs=35.9
Q ss_pred ecccCCCCCCCCCeEeccCCCCeeeccccccCccc---cCCCCcEEcCCCcccc
Q 026373 186 CGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK---AENIKQYKCPSCSMKR 236 (239)
Q Consensus 186 C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~---a~~i~~y~Cp~C~~Kr 236 (239)
|..|...++.+..||+|+.|+.|||..|+++.... .+.++.|.|+.|..+.
T Consensus 62 c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp BCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 44454444445679999999999999999986532 2334679999998754
No 50
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.67 E-value=3.2e-05 Score=59.90 Aligned_cols=50 Identities=24% Similarity=0.594 Sum_probs=39.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCS 233 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~ 233 (239)
++.+|.+|+...+ ...||.|+.|.+.||..|+++...... ...|+|+.|.
T Consensus 6 ~~~~C~~C~~~g~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~-~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGD-LLDQFFCTTCGQHYHGMCLDIAVTPLK-RAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCC-TTTSEECSSSCCEECTTTTTCCCCTTT-STTCCCTTTC
T ss_pred CCCCCcCCCCCCC-CcCCeECCCCCCCcChHHhCCcccccc-ccCccCCcCC
Confidence 4557999998754 357899999999999999998765432 2579999885
No 51
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.35 E-value=4.3e-05 Score=59.65 Aligned_cols=52 Identities=25% Similarity=0.566 Sum_probs=38.2
Q ss_pred CCceecccCCCC-----CCCCCeEeccCCCCeeeccccccCccccC--CCCcEEcCCCc
Q 026373 182 SETLCGSCGGNY-----NADEFWIGCDICERWFHGKCVKITPAKAE--NIKQYKCPSCS 233 (239)
Q Consensus 182 ~~~~C~~C~~~~-----~~d~~mIqCD~C~~WfH~~CVgit~~~a~--~i~~y~Cp~C~ 233 (239)
...+|.+|.... ...+.||.|+.|...||..|+++.+.... ....|+|+.|.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 346799997653 22568999999999999999998643211 12569999995
No 52
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.00 E-value=0.00015 Score=56.84 Aligned_cols=50 Identities=26% Similarity=0.582 Sum_probs=36.3
Q ss_pred ceecccCCCC------CCCCCeEeccCCCCeeeccccccCccccC--CCCcEEcCCCc
Q 026373 184 TLCGSCGGNY------NADEFWIGCDICERWFHGKCVKITPAKAE--NIKQYKCPSCS 233 (239)
Q Consensus 184 ~~C~~C~~~~------~~d~~mIqCD~C~~WfH~~CVgit~~~a~--~i~~y~Cp~C~ 233 (239)
.+|.+|.... ...+.+|.|+.|...||..|+++...... ....|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 4688897644 22468999999999999999998743211 11469988874
No 53
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.75 E-value=0.00059 Score=56.10 Aligned_cols=52 Identities=23% Similarity=0.523 Sum_probs=38.9
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCCCeeeccccccCcc-----cc-CCCCcEEcCCCccc
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPA-----KA-ENIKQYKCPSCSMK 235 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~-----~a-~~i~~y~Cp~C~~K 235 (239)
+..+.+|.+|+. ++..|.||.|.+-||..|+..... .+ ...+.|.|+.|..+
T Consensus 60 Dg~~d~C~vC~~----GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCC----CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCC----CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 445678999986 457999999999999999984321 11 12367999999864
No 54
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.25 E-value=0.0015 Score=52.93 Aligned_cols=52 Identities=23% Similarity=0.536 Sum_probs=38.5
Q ss_pred cCCCceecccCCCCCCCCCeEeccCCCCeeeccccccC--c---ccc-CCCCcEEcCCCccc
Q 026373 180 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT--P---AKA-ENIKQYKCPSCSMK 235 (239)
Q Consensus 180 e~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit--~---~~a-~~i~~y~Cp~C~~K 235 (239)
+..+.+|.+|+. ++..|.||.|.+-||..|+... + ..+ ...+.|.|..|..+
T Consensus 54 Dg~~~~C~vC~d----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTCC----CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecCC----CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 445567999985 4579999999999999999843 1 122 12367999999865
No 55
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=93.81 E-value=0.047 Score=35.73 Aligned_cols=47 Identities=23% Similarity=0.473 Sum_probs=34.1
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
..|++|...+..+...+....|+..||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~-----~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS-----HSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT-----CCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc-----CCcCcCCCCE
Confidence 4599999887655555666679999999999754321 2479999854
No 56
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=93.35 E-value=0.051 Score=37.29 Aligned_cols=49 Identities=27% Similarity=0.472 Sum_probs=32.4
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.....|++|...+..+.. +..-.|+..||..|+.--... ...||.|+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGED-VRRLPCMHLFHQVCVDQWLIT-----NKKCPICRVD 60 (69)
T ss_dssp TCCCSBTTTTBCCCSSSC-EEECTTSCEEEHHHHHHHHHH-----CSBCTTTCSB
T ss_pred CCCCCCeeCCccccCCCc-EEEeCCCCHHHHHHHHHHHHc-----CCCCcCcCcc
Confidence 344569999887653333 333469999999999743221 1369999864
No 57
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=91.75 E-value=0.18 Score=35.35 Aligned_cols=48 Identities=25% Similarity=0.492 Sum_probs=31.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|.+|...+......+. -.|...||..|+.--.. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~-~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~~ 61 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQ-LPCNHLFHDSCIVPWLE-----QHDSCPVCRKS 61 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEE-CTTSCEEETTTTHHHHT-----TTCSCTTTCCC
T ss_pred CCCCCeeCCccccCCCCEEE-eCCCCeecHHHHHHHHH-----cCCcCcCcCCc
Confidence 34569999887754333222 25889999999974322 12489999864
No 58
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.61 E-value=0.067 Score=40.63 Aligned_cols=51 Identities=24% Similarity=0.598 Sum_probs=36.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeecccccc---Cc--------cccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKI---TP--------AKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgi---t~--------~~a~~i~~y~Cp~C~~ 234 (239)
.+..|.+|..-. .+.++.|..|.+-||..|..- .. ..|....-|.|+.|..
T Consensus 14 ~D~~C~VC~~~t--~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVWT--AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCCC--SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCcccccc--ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 445699998643 568999999999999999742 11 1122235799999975
No 59
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=91.41 E-value=0.15 Score=36.96 Aligned_cols=33 Identities=21% Similarity=0.571 Sum_probs=21.4
Q ss_pred CCCeEecc--CCCCeeeccccccCccccCCCCcEEcCC
Q 026373 196 DEFWIGCD--ICERWFHGKCVKITPAKAENIKQYKCPS 231 (239)
Q Consensus 196 d~~mIqCD--~C~~WfH~~CVgit~~~a~~i~~y~Cp~ 231 (239)
...||||| .|.+|--.. .++... ..++.|+|..
T Consensus 15 ~~~WVQCd~p~C~KWR~LP-~~~~~~--~lpd~W~C~m 49 (69)
T 2e61_A 15 CLVWVQCSFPNCGKWRRLC-GNIDPS--VLPDNWSCDQ 49 (69)
T ss_dssp CCCEEECSSTTTCCEEECC-SSCCTT--TSCTTCCGGG
T ss_pred CCeEEEeCccccCcccCCc-cccccc--cCCCcCEeCC
Confidence 46899999 999995542 122221 2346799964
No 60
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=91.30 E-value=0.099 Score=34.02 Aligned_cols=48 Identities=21% Similarity=0.464 Sum_probs=34.4
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..|++|...+..++..+..-.|+..||..|+.--.... ..||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-----CcCCCCCCc
Confidence 345999998875444556666799999999997443221 579999864
No 61
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=91.14 E-value=0.082 Score=41.02 Aligned_cols=35 Identities=17% Similarity=0.601 Sum_probs=23.2
Q ss_pred CCCCeEeccCCCCeeeccccccCccccCCCCcEEcCC
Q 026373 195 ADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPS 231 (239)
Q Consensus 195 ~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~ 231 (239)
....|||||.|.+|=-.. .++.. .....+.|+|..
T Consensus 24 ~~~~WVQCD~C~KWRrLP-~~~~~-~~~~pd~W~C~m 58 (100)
T 2l7p_A 24 TESAWVRCDDCFKWRRIP-ASVVG-SIDESSRWICMN 58 (100)
T ss_dssp SSSEEEECTTTCCEEEEC-HHHHT-TSTTSSCCCGGG
T ss_pred CCCeEEeeCCCCccccCC-hhHcc-ccCCCCCceeCC
Confidence 367899999999997664 22211 112347799965
No 62
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=90.59 E-value=0.1 Score=38.21 Aligned_cols=48 Identities=29% Similarity=0.605 Sum_probs=32.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|...+..+...+.- .|+..||..|+.--.. ....||.|+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l-~C~H~Fh~~Ci~~wl~-----~~~~CP~Cr~~ 86 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATEL-PCHHYFHKPCVSIWLQ-----KSGTCPVCRCM 86 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEE-TTTEEEEHHHHHHHHT-----TTCBCTTTCCB
T ss_pred CCCCCcccChhhcCCCcEEec-CCCChHHHHHHHHHHH-----cCCcCcCcCcc
Confidence 455799998776544434333 4999999999874322 12489999864
No 63
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.82 E-value=0.2 Score=34.69 Aligned_cols=47 Identities=28% Similarity=0.603 Sum_probs=31.9
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..|.+|...+......+.. .|...||..|+.--... ...||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~~-----~~~CP~Cr~~ 61 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLEV-----RKVCPLCNMP 61 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHHc-----CCcCCCcCcc
Confidence 34699999887644444333 48999999999743221 1379999854
No 64
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.54 E-value=0.21 Score=36.41 Aligned_cols=48 Identities=17% Similarity=0.395 Sum_probs=32.2
Q ss_pred ceecccCCCCCCCCCeEe---ccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 184 TLCGSCGGNYNADEFWIG---CDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIq---CD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
..|.+|...+.+++.+|. |.+...+||..|+.--.... ....||.|+.
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~---~~~~CplCr~ 66 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS---DTRCCELCKY 66 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH---CCSBCSSSCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC---CCCCCCCCCC
Confidence 359999887765566663 23334999999997433221 2358999985
No 65
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.22 E-value=0.2 Score=34.92 Aligned_cols=48 Identities=27% Similarity=0.570 Sum_probs=32.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|.+|...+... ..+..-.|+.-||..|+.--... ...||.|+..
T Consensus 22 ~~~~C~IC~~~~~~~-~~~~~l~C~H~fh~~Ci~~w~~~-----~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMCDFESR-QLLRVLPCNHEFHAKCVDKWLKA-----NRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTEECCBT-CEEEEETTTEEEETTHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCeECCcccCCC-CeEEEECCCCHhHHHHHHHHHHc-----CCcCcCcCCc
Confidence 445799999876533 34444469999999999753322 1479999854
No 66
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=88.68 E-value=0.17 Score=38.03 Aligned_cols=50 Identities=20% Similarity=0.347 Sum_probs=31.3
Q ss_pred eecccCCCCCCCC--------------CeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 185 LCGSCGGNYNADE--------------FWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 185 ~C~~C~~~~~~d~--------------~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
.|++|...+.... ..+.--.|...||..|+.--...........||.|+.
T Consensus 27 ~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 27 DCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp EETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred cCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 6999977653211 2333457899999999974321111113469999985
No 67
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.04 E-value=0.57 Score=33.07 Aligned_cols=51 Identities=20% Similarity=0.390 Sum_probs=34.2
Q ss_pred CCceecccCCCCCCCCC-eEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEF-WIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~-mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|...+..... .+.- .|+..||..|+.--.... .....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASS--INGVRCPFCSKI 65 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHC--SSCBCCTTTCCC
T ss_pred CCCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcC--CCCcCCCCCCCc
Confidence 34569999988764332 3333 699999999997433221 134799999863
No 68
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.12 E-value=0.64 Score=32.76 Aligned_cols=46 Identities=15% Similarity=0.340 Sum_probs=32.0
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.....|++|...+.. . +. -.|+..||..|+.-.... ...||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~--p-~~-~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 58 (81)
T 2csy_A 13 EIPFRCFICRQAFQN--P-VV-TKCRHYFCESCALEHFRA-----TPRCYICDQP 58 (81)
T ss_dssp CCCSBCSSSCSBCCS--E-EE-CTTSCEEEHHHHHHHHHH-----CSBCSSSCCB
T ss_pred CCCCCCcCCCchhcC--e-eE-ccCCCHhHHHHHHHHHHC-----CCcCCCcCcc
Confidence 345679999887642 2 22 379999999998744321 2589999864
No 69
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.07 E-value=2 Score=29.14 Aligned_cols=48 Identities=23% Similarity=0.474 Sum_probs=32.2
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|...+.+ . +.- .|+..||..|+...... ......||.|+..
T Consensus 19 ~~~~C~IC~~~~~~--~-~~~-~CgH~fC~~Ci~~~~~~--~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 19 EEVICPICLDILQK--P-VTI-DCGHNFCLKCITQIGET--SCGFFKCPLCKTS 66 (73)
T ss_dssp CCCBCTTTCSBCSS--E-EEC-TTCCEEEHHHHHHHCSS--SCSCCCCSSSCCC
T ss_pred cCCEeccCCcccCC--e-EEc-CCCChhhHHHHHHHHHc--CCCCCCCCCCCCc
Confidence 34579999987642 2 222 79999999999743221 1134689999864
No 70
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=81.03 E-value=1.1 Score=31.09 Aligned_cols=48 Identities=19% Similarity=0.484 Sum_probs=32.9
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|..... .-+.-..|+..||..|+.-..... ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLES---DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHHS---SSSCCSSSCCS
T ss_pred CCCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHhc---CCCcCCCCCCc
Confidence 4567999988764 233444599999999997543321 23689999875
No 71
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.68 E-value=1.7 Score=29.83 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=30.4
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|.+|..... + .+.- .|+..||..|+.--.. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~-~--~~~~-~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 58 (71)
T 2d8t_A 14 TVPECAICLQTCV-H--PVSL-PCKHVFCYLCVKGASW-----LGKRCALCRQE 58 (71)
T ss_dssp SCCBCSSSSSBCS-S--EEEE-TTTEEEEHHHHHHCTT-----CSSBCSSSCCB
T ss_pred CCCCCccCCcccC-C--CEEc-cCCCHHHHHHHHHHHH-----CCCcCcCcCch
Confidence 3456999987764 2 2333 5898999999974322 12589999864
No 72
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=78.72 E-value=1.2 Score=33.03 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=26.1
Q ss_pred CCCceecccCCCCCCCCCeEecc--CCCCeeeccccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVK 215 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~CVg 215 (239)
.....|.+|++.. .+--|||. .|...||..|..
T Consensus 15 R~~l~C~iC~~~~--~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 15 RWKLTCYLCKQKG--VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCBTTTTBCC--SSCEEECSCTTTCCEEEHHHHH
T ss_pred HhcCCCcCCCCCC--CcEeEecCCCCCCCcCcHHHHH
Confidence 4567799998652 35889998 599999999963
No 73
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=77.78 E-value=1.2 Score=29.55 Aligned_cols=43 Identities=16% Similarity=0.448 Sum_probs=29.3
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.....|.+|...+.. -..+ .|+.-|+..|+.- ....||.|+..
T Consensus 4 ~~~~~C~IC~~~~~~-p~~l---~CgH~fC~~Ci~~--------~~~~CP~Cr~~ 46 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC-PKLL---PCLHTLCSGCLEA--------SGMQCPICQAP 46 (56)
T ss_dssp CCCSSCSSSCSSCBC-CSCS---TTSCCSBTTTCSS--------SSSSCSSCCSS
T ss_pred ccCCCceEeCCccCC-eEEc---CCCCcccHHHHcc--------CCCCCCcCCcE
Confidence 345669999887753 2223 4777888899765 12579999864
No 74
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.43 E-value=0.47 Score=33.96 Aligned_cols=45 Identities=20% Similarity=0.557 Sum_probs=28.4
Q ss_pred ecccCCCCC-----------CCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 186 CGSCGGNYN-----------ADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 186 C~~C~~~~~-----------~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
|++|..... .++..+.--.|+.-||..|+.---.. .-.||.|+..
T Consensus 18 C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-----~~~CP~CR~~ 73 (81)
T 2ecl_A 18 CAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ-----NNRCPLCQQD 73 (81)
T ss_dssp BTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT-----CCBCTTTCCB
T ss_pred CcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh-----CCCCCCcCCC
Confidence 666665543 23334444479999999998743221 1389999864
No 75
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=76.41 E-value=2.1 Score=29.47 Aligned_cols=50 Identities=16% Similarity=0.424 Sum_probs=32.1
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccc--cCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK--AENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~--a~~i~~y~Cp~C~~K 235 (239)
.+..|++|...+.+ -..+ .|+.-||..|+.---.. ........||.|+..
T Consensus 11 ~~~~C~IC~~~~~~-p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 11 EEVTCPICLELLTE-PLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCCEETTTTEECSS-CCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred cCCCCcCCCcccCC-eeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 34679999887642 2222 58889999998743221 111235799999864
No 76
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.04 E-value=1.6 Score=28.23 Aligned_cols=45 Identities=24% Similarity=0.542 Sum_probs=29.1
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCC
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC 232 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C 232 (239)
....|++|...+.+ ...+ .|+..||..|+.-...... ....||.|
T Consensus 14 ~~~~C~IC~~~~~~-p~~~---~CgH~fC~~Ci~~~~~~~~--~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKE-PVII---ECGHNFCKACITRWWEDLE--RDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSS-CCCC---SSCCCCCHHHHHHHTTSSC--CSCCCSCC
T ss_pred cCCCCccCCcccCc-cEeC---CCCCccCHHHHHHHHHhcC--CCCCCCCC
Confidence 34569999987753 2222 5888899999874322111 34689887
No 77
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.66 E-value=2.5 Score=28.02 Aligned_cols=45 Identities=24% Similarity=0.471 Sum_probs=29.5
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCC
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC 232 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C 232 (239)
.+..|++|.....+ ..+ - .|+..||..|+.--.... .....||.|
T Consensus 19 ~~~~C~IC~~~~~~--p~~-~-~CgH~fC~~Ci~~~~~~~--~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQK--PVT-I-DCGHNFCLKCITQIGETS--CGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSS--CEE-C-TTSSEECHHHHHHHHHHC--SSCCCCSCC
T ss_pred cCCCCCcCCchhCC--eEE-e-CCCCcchHHHHHHHHHcC--CCCCcCcCC
Confidence 34569999887642 222 2 799999999997433211 124689987
No 78
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=73.91 E-value=1.2 Score=37.01 Aligned_cols=55 Identities=27% Similarity=0.603 Sum_probs=40.0
Q ss_pred cccCCCceecccCCCCCCCCCeEecc--CCCCeeecccccc--Cc---cccCCCCcEEcCCCcccc
Q 026373 178 EDEHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKI--TP---AKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 178 eee~~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~CVgi--t~---~~a~~i~~y~Cp~C~~Kr 236 (239)
|+|..+.+|.+|+. ++..|.|| .|.+-|=..|+.. .+ ..+...+.|.|-.|..+.
T Consensus 74 DeDG~~~yC~wC~~----Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 74 DDDGYQSYCTICCG----GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp CTTSSBSSCTTTSC----CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCCCcceeeEecC----CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 33445668999985 45899999 8999999999863 22 122334789999998653
No 79
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=71.72 E-value=1.8 Score=32.98 Aligned_cols=46 Identities=20% Similarity=0.389 Sum_probs=29.8
Q ss_pred eecccCCCCCCC--------------CCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNAD--------------EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~d--------------~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.|++|...+... +..+.--.|+.-||..|+.--.. .+..||.|+..
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-----~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-----TRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-----TCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH-----cCCcCcCCCCc
Confidence 488887765421 11233347999999999874322 12589999864
No 80
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.53 E-value=2.4 Score=29.24 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=31.1
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCcccc-CCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKA-ENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a-~~i~~y~Cp~C~~K 235 (239)
...|++|...+.. -..+ .|+..||..|+....... .......||.|+..
T Consensus 19 ~~~C~IC~~~~~~-p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCTTTCSCCSS-CBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred CCCCCCCCcccCC-ceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 4569999987752 2222 688899999997422210 01124789999854
No 81
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.36 E-value=3 Score=30.08 Aligned_cols=47 Identities=21% Similarity=0.477 Sum_probs=32.6
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
....|.+|..... .-+.|..|..=||..|+.---... ..=.||.|+.
T Consensus 14 ~i~~C~IC~~~i~---~g~~C~~C~h~fH~~Ci~kWl~~~---~~~~CP~Cr~ 60 (74)
T 2ct0_A 14 AVKICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQSN---AEPRCPHCND 60 (74)
T ss_dssp SSCBCSSSCCBCS---SSEECSSSCCEECHHHHHHHSTTC---SSCCCTTTCS
T ss_pred CCCcCcchhhHcc---cCCccCCCCchhhHHHHHHHHHhc---CCCCCCCCcC
Confidence 3346999998765 236888999999999997321111 0137999985
No 82
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=71.16 E-value=1.5 Score=34.95 Aligned_cols=47 Identities=23% Similarity=0.496 Sum_probs=34.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|...+. .-+.+-.|+..||..|+.-.-.. ....||.|+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 99 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECLHRFCADCIITALRS----GNKECPTCRKK 99 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred CCCCCcccChHhh---CcCEeCCCCChhHHHHHHHHHHh----CcCCCCCCCCc
Confidence 4457999988764 35566689999999999754321 23689999864
No 83
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=70.56 E-value=1.6 Score=32.20 Aligned_cols=47 Identities=17% Similarity=0.337 Sum_probs=34.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|..... .-+.|-.|+.-||..|+.---... ...||.|+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~----~~~CP~Cr~~ 67 (100)
T 3lrq_A 21 EVFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQ----RAQCPHCRAP 67 (100)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHT----CSBCTTTCCB
T ss_pred CCCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHC----cCCCCCCCCc
Confidence 4456999988764 467888999999999997433221 1689999864
No 84
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=70.03 E-value=1.1 Score=42.07 Aligned_cols=54 Identities=22% Similarity=0.509 Sum_probs=39.7
Q ss_pred ccCCCceecccCCCCCCCCCeEecc--CCCCeeeccccccCc--c---ccCCCCcEEcCCCcccc
Q 026373 179 DEHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITP--A---KAENIKQYKCPSCSMKR 236 (239)
Q Consensus 179 ee~~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~CVgit~--~---~a~~i~~y~Cp~C~~Kr 236 (239)
++..+.+|..|+. ++..|.|| .|.+-|-..|+...- . .+...+.|.|-.|..+.
T Consensus 89 ~DG~~~yCr~C~~----Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 89 DDGYQSYCSICCS----GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSSBCSCTTTCC----CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCCcccceEcCC----CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 3456678999985 45899999 999999999986422 1 12234679999998653
No 85
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.51 E-value=2.1 Score=29.35 Aligned_cols=46 Identities=22% Similarity=0.444 Sum_probs=31.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|.....+ -+.-..|+.-||..|+.-.... ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY-----SNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc-----CCcCCCcCcc
Confidence 34579999877642 3444578889999998643321 2589999863
No 86
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.46 E-value=1.2 Score=29.76 Aligned_cols=50 Identities=22% Similarity=0.474 Sum_probs=32.8
Q ss_pred CCceecccCCCCCCC---CCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNAD---EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d---~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
....|++|...+... ...+.--.|+.-||..|+.--... ...||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~~ 66 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKKI 66 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-----CSSCTTTCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-----CCCCCCCCCcc
Confidence 345699998876421 233344578899999999743322 24799998653
No 87
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=69.17 E-value=2 Score=30.49 Aligned_cols=54 Identities=20% Similarity=0.476 Sum_probs=41.5
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
+..+|.+|.+....++.---|-.|+.=+-..|-|..+-... -..|.|..|.++.
T Consensus 8 d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~-k~~WvC~lC~k~q 61 (62)
T 2a20_A 8 DAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSN-KVMWVCNLCRKQQ 61 (62)
T ss_dssp CCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTT-CEEEEEHHHHHHT
T ss_pred CcchhhhhccceeccCCCccccccCCeeecccCCEeeecCC-eEEEEehhhhhcc
Confidence 45679999998877888888999999999999885443222 2479999998653
No 88
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=68.41 E-value=5 Score=27.58 Aligned_cols=49 Identities=18% Similarity=0.403 Sum_probs=31.4
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCcccc-CCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKA-ENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a-~~i~~y~Cp~C~~K 235 (239)
...|++|...+.. .. .. .|+..||..|+....... .......||.|+..
T Consensus 19 ~~~C~IC~~~~~~--p~-~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 19 EVTCPICLELLKE--PV-SA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TTSCTTTCSCCSS--CE-EC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred CCCCcCCChhhCc--ce-eC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 4569999887642 22 22 488899999987422211 11235799999864
No 89
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=67.95 E-value=5.5 Score=37.31 Aligned_cols=54 Identities=22% Similarity=0.403 Sum_probs=35.0
Q ss_pred CCceecccCCCCCCCCC--eEecc--CCCCeeecccccc------CccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEF--WIGCD--ICERWFHGKCVKI------TPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~--mIqCD--~C~~WfH~~CVgi------t~~~a~~i~~y~Cp~C~~K 235 (239)
...-|++|-....+++. -..|+ .|+.=||..|+-- +....-.+-.--||.|+..
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 44569999765443222 35698 8999999999842 1112223345689999864
No 90
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=67.78 E-value=2.5 Score=30.39 Aligned_cols=49 Identities=18% Similarity=0.394 Sum_probs=31.9
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
++..|++|-.+... +-....| .|+.-|+..|....-.. ..+.||.|++.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~----~~~~CP~CR~~ 59 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD----ENGLCPACRKP 59 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS----SCSBCTTTCCB
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc----CCCCCCCCCCc
Confidence 34569999987642 2223334 68888999998633211 34799999864
No 91
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=64.73 E-value=1.5 Score=28.82 Aligned_cols=48 Identities=23% Similarity=0.536 Sum_probs=32.1
Q ss_pred CceecccCCCCCC---CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNA---DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~---d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..|++|...+.. ....+..-.|+..||..|+.--... ...||.|+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-----CCCCCCCCcc
Confidence 3469999886542 2233444578999999999743322 2489999864
No 92
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=63.63 E-value=1.4 Score=29.83 Aligned_cols=49 Identities=22% Similarity=0.541 Sum_probs=32.7
Q ss_pred CCceecccCCCCCC---CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNA---DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~---d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
++..|++|...+.+ ++..+..-.|+.-||..|+.--... ...||.|+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 60 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-----CCCCCCCCCc
Confidence 34569999887542 2344455679999999999743221 1389999864
No 93
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=62.84 E-value=1.6 Score=30.02 Aligned_cols=50 Identities=16% Similarity=0.369 Sum_probs=29.8
Q ss_pred CCceecccCCCCCCCCCeEec--cCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGC--DICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqC--D~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+...|.+|....+ +....-| .+.-++||..|+.---... ....|+.|...
T Consensus 5 ~~~~CrIC~~~~~-~~l~~PC~C~gs~~~~H~~Cl~~W~~~~---~~~~C~~C~~~ 56 (60)
T 1vyx_A 5 DVPVCWICNEELG-NERFRACGCTGELENVHRSCLSTWLTIS---RNTACQICGVV 56 (60)
T ss_dssp SCCEETTTTEECS-CCCCCSCCCSSGGGSCCHHHHHHHHHHH---TCSBCTTTCCB
T ss_pred CCCEeEEeecCCC-CceecCcCCCCchhhhHHHHHHHHHHhC---CCCccCCCCCe
Confidence 4456999976543 2232333 3334599999997432211 13689999854
No 94
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.73 E-value=3.1 Score=27.91 Aligned_cols=46 Identities=17% Similarity=0.353 Sum_probs=31.4
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|.....+ -..+ .|+..||..|+.-.... ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~---~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 59 (66)
T 2ecy_A 14 DKYKCEKCHLVLCS-PKQT---ECGHRFCESCMAALLSS----SSPKCTACQES 59 (66)
T ss_dssp CCEECTTTCCEESS-CCCC---SSSCCCCHHHHHHHHTT----SSCCCTTTCCC
T ss_pred cCCCCCCCChHhcC-eeEC---CCCCHHHHHHHHHHHHh----CcCCCCCCCcC
Confidence 34679999887652 2222 78889999998743321 23589999864
No 95
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=62.03 E-value=3 Score=30.89 Aligned_cols=46 Identities=22% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|..... .-+..-.|+..||..|+.-.-.. ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (108)
T 2ckl_A 14 PHLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLET-----SKYCPICDVQ 59 (108)
T ss_dssp GGTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTS-----CSBCTTTCCB
T ss_pred CcCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHh-----CCcCcCCCcc
Confidence 3457999988764 34555689999999998743221 2589999864
No 96
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=61.70 E-value=2 Score=33.62 Aligned_cols=46 Identities=20% Similarity=0.437 Sum_probs=0.0
Q ss_pred eecccCCCCCC--------------CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 185 LCGSCGGNYNA--------------DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 185 ~C~~C~~~~~~--------------d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.|.+|...+.+ ++..|.--.|..-||..|+.--... .-.||.|+..
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-----~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-----RQVCPLDNRE 109 (117)
T ss_dssp -----------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-----CCcCCCCCCe
Confidence 59999876542 1111222368899999998754221 2579999853
No 97
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=60.83 E-value=4.3 Score=27.99 Aligned_cols=46 Identities=9% Similarity=0.017 Sum_probs=31.9
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|..... ...+. .|+..|+..|+.---.. ....||.|+..
T Consensus 7 ~~~~C~IC~~~~~--~Pv~~--~CgH~fc~~Ci~~~~~~----~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMK--DPVIV--STGQTYERSSIQKWLDA----GHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCS--SEEEE--TTTEEEEHHHHHHHHTT----TCCBCTTTCCB
T ss_pred ccCCCCCcccccc--CCEEc--CCCCeecHHHHHHHHHH----CcCCCCCCcCC
Confidence 4567999998764 23332 69999999998743221 24689999864
No 98
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=60.55 E-value=5.1 Score=29.68 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=29.8
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccC
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE 222 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~ 222 (239)
..|-+|++.. .++.-.|..|+.-.|..|+...+...+
T Consensus 48 ~~C~~C~~~~--~~~~Y~C~~C~f~lH~~Ca~~p~~~~~ 84 (89)
T 1v5n_A 48 YTCDKCEEEG--TIWSYHCDECDFDLHAKCALNEDTKES 84 (89)
T ss_dssp CCCTTTSCCC--CSCEEECTTTCCCCCHHHHHCSSCSSC
T ss_pred eEeCCCCCcC--CCcEEEcCCCCCeEcHHhcCCCCcccc
Confidence 4698999874 567788999999999999988765543
No 99
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=59.77 E-value=3.4 Score=27.66 Aligned_cols=44 Identities=18% Similarity=0.339 Sum_probs=29.3
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
..|++|.....+ -+..-.|+.-||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 49 (68)
T 1chc_A 6 ERCPICLEDPSN---YSMALPCLHAFCYVCITRWIRQ-----NPTCPLCKVP 49 (68)
T ss_dssp CCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHHH-----SCSTTTTCCC
T ss_pred CCCeeCCccccC---CcEecCCCCeeHHHHHHHHHhC-----cCcCcCCChh
Confidence 459999887642 1233468888999999643221 1479999853
No 100
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=59.69 E-value=4 Score=29.61 Aligned_cols=46 Identities=20% Similarity=0.500 Sum_probs=32.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|...+.+ -+..-.|+.-||..|+.-... ....||.|+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 66 (99)
T 2y43_A 21 DLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLS-----YKTQCPTCCVT 66 (99)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHT-----TCCBCTTTCCB
T ss_pred CCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHH-----CCCCCCCCCCc
Confidence 34579999887652 334457999999999864322 12589999864
No 101
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=59.00 E-value=4 Score=29.03 Aligned_cols=49 Identities=18% Similarity=0.504 Sum_probs=32.4
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
..+..|++|.....+ . +.-..|+.-|+..|+.-.-... ....||.|+..
T Consensus 11 ~~~~~C~IC~~~~~~--p-~~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTD--A-VVIPCCGNSYCDECIRTALLES---DEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSS--C-EECTTTCCEECHHHHHHHHHHC---TTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcC--c-eECCCCCCHHHHHHHHHHHHhc---CCCcCcCCCCc
Confidence 355789999877642 2 2333489999999986432211 23689999865
No 102
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.42 E-value=3 Score=30.63 Aligned_cols=47 Identities=17% Similarity=0.321 Sum_probs=30.9
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
...|++|...+.+ -..+ .|+..||..|+.-...... ....||.|+..
T Consensus 21 ~~~C~IC~~~~~~-p~~~---~CgH~fC~~Ci~~~~~~~~--~~~~CP~Cr~~ 67 (112)
T 1jm7_A 21 ILECPICLELIKE-PVST---KCDHIFCKFCMLKLLNQKK--GPSQCPLCKND 67 (112)
T ss_dssp HTSCSSSCCCCSS-CCBC---TTSCCCCSHHHHHHHHSSS--SSCCCTTTSCC
T ss_pred CCCCcccChhhcC-eEEC---CCCCHHHHHHHHHHHHhCC--CCCCCcCCCCc
Confidence 4569999887642 2222 6899999999874322111 23689999863
No 103
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=56.92 E-value=5.5 Score=34.47 Aligned_cols=47 Identities=21% Similarity=0.460 Sum_probs=34.2
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
....|.+|...-. .=+.|..|+.=||..|+.---.. ...-.||.|..
T Consensus 179 ~i~~C~iC~~iv~---~g~~C~~C~~~~H~~C~~~~~~~---~~~~~CP~C~~ 225 (238)
T 3nw0_A 179 AVKICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQS---NAEPRCPHCND 225 (238)
T ss_dssp TCCBCTTTCSBCS---SCEECSSSCCEECHHHHHHHTTT---CSSCBCTTTCC
T ss_pred CCCcCcchhhHHh---CCcccCccChHHHHHHHHHHHHh---CCCCCCCCCCC
Confidence 4667999998765 23889999999999999742111 12358999975
No 104
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.87 E-value=2.6 Score=28.51 Aligned_cols=42 Identities=24% Similarity=0.546 Sum_probs=29.2
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
...|.+|...... .. -.|+..||..|+.--.. ....||.|+.
T Consensus 15 ~~~C~IC~~~~~~--~~---~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~ 56 (70)
T 2ecn_A 15 EEECCICMDGRAD--LI---LPCAHSFCQKCIDKWSD-----RHRNCPICRL 56 (70)
T ss_dssp CCCCSSSCCSCCS--EE---ETTTEEECHHHHHHSSC-----CCSSCHHHHH
T ss_pred CCCCeeCCcCccC--cc---cCCCCcccHHHHHHHHH-----CcCcCCCcCC
Confidence 4569999887653 22 35788899999974322 2358999974
No 105
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=55.42 E-value=5.7 Score=31.76 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=38.4
Q ss_pred CCceecccCCCCC-CCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~-~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
++..|..|+++.. -+..-..|-.|..=+=.+|-+..... .....|+|..|.+.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~-~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNN-RPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCS-SSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCC-CCccceechhhHHH
Confidence 3457999999873 24567899999988888998866321 12246999999864
No 106
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=54.01 E-value=3.9 Score=31.75 Aligned_cols=43 Identities=19% Similarity=0.506 Sum_probs=28.9
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
..|++|...+. +-.++ .|+..||..|+.---. ....||.|+..
T Consensus 54 ~~C~iC~~~~~-~~~~~---~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFI-EAVTL---NCAHSFCSYCINEWMK-----RKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCS-SEEEE---TTSCEEEHHHHHHHTT-----TCSBCTTTCCB
T ss_pred CCCcccCcccC-CceEC---CCCCCccHHHHHHHHH-----cCCcCCCCCCc
Confidence 46999988764 22222 5888999999863211 22479999853
No 107
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=53.01 E-value=6.3 Score=29.31 Aligned_cols=45 Identities=24% Similarity=0.411 Sum_probs=31.2
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..|++|...... ..+- .|+.-||..|+.-.... ....||.|+..
T Consensus 15 ~~~C~iC~~~~~~--p~~~--~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 59 (115)
T 3l11_A 15 ECQCGICMEILVE--PVTL--PCNHTLCKPCFQSTVEK----ASLCCPFCRRR 59 (115)
T ss_dssp HHBCTTTCSBCSS--CEEC--TTSCEECHHHHCCCCCT----TTSBCTTTCCB
T ss_pred CCCCccCCcccCc--eeEc--CCCCHHhHHHHHHHHhH----CcCCCCCCCcc
Confidence 4679999887642 2222 68999999998754321 24789999864
No 108
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=49.39 E-value=4.3 Score=30.76 Aligned_cols=45 Identities=18% Similarity=0.445 Sum_probs=30.7
Q ss_pred CceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
...|++|.....+ . +.- .|+.-||..|+.-.-. ...+.||.|+..
T Consensus 52 ~~~C~IC~~~~~~--p-~~~-~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 96 (124)
T 3fl2_A 52 TFQCICCQELVFR--P-ITT-VCQHNVCKDCLDRSFR----AQVFSCPACRYD 96 (124)
T ss_dssp HTBCTTTSSBCSS--E-EEC-TTSCEEEHHHHHHHHH----TTCCBCTTTCCB
T ss_pred CCCCCcCChHHcC--c-EEe-eCCCcccHHHHHHHHh----HCcCCCCCCCcc
Confidence 3569999887642 2 222 7899999999864322 134699999864
No 109
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=42.95 E-value=5.8 Score=29.50 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=32.3
Q ss_pred CceecccCCCCCC---CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNA---DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~---d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
...|.+|...+.. ....+..-.|+..||..|+.--... ...||.|+..
T Consensus 72 ~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 122 (133)
T 4ap4_A 72 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 122 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc-----CCCCCCCCCc
Confidence 3459999876542 1233445589999999999754322 2489999853
No 110
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=40.46 E-value=30 Score=25.75 Aligned_cols=34 Identities=26% Similarity=0.580 Sum_probs=27.3
Q ss_pred CCeEeccCCC-CeeeccccccCccccCCCCcEEcCCCcc
Q 026373 197 EFWIGCDICE-RWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 197 ~~mIqCD~C~-~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
-.+|-|..|. .=-|..|..+... .+.|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~~~----~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLRPN----SKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCCTT----CSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhCCcCC----CCCEECCcCcc
Confidence 3478899998 8889999998643 25699999985
No 111
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=39.35 E-value=23 Score=31.84 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=28.3
Q ss_pred CCCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 181 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
...+.|..|+....+ ...-..|..|+..+|..|.+.-
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 456889999987532 3345679999999999998743
No 112
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=38.12 E-value=18 Score=24.36 Aligned_cols=13 Identities=23% Similarity=0.887 Sum_probs=10.3
Q ss_pred CCcEEcCCCcccc
Q 026373 224 IKQYKCPSCSMKR 236 (239)
Q Consensus 224 i~~y~Cp~C~~Kr 236 (239)
.+.|.||.|...+
T Consensus 34 P~dw~CP~Cg~~K 46 (52)
T 1e8j_A 34 PDDWACPVCGASK 46 (52)
T ss_dssp CTTCCCSSSCCCT
T ss_pred CCCCcCCCCCCcH
Confidence 4679999998654
No 113
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=37.92 E-value=8.3 Score=24.12 Aligned_cols=24 Identities=21% Similarity=0.578 Sum_probs=16.4
Q ss_pred eecccCCCCCC-----CCCeEeccCCCCe
Q 026373 185 LCGSCGGNYNA-----DEFWIGCDICERW 208 (239)
Q Consensus 185 ~C~~C~~~~~~-----d~~mIqCD~C~~W 208 (239)
+|..|+.|+.. +.+++.|+.|+..
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~~ 30 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGAI 30 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTEE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCCc
Confidence 68889888643 4456668888743
No 114
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=37.87 E-value=11 Score=28.17 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=30.9
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|..... .-+.. .|+..|+..|+.-...... ..||.|+..
T Consensus 17 ~~~~C~IC~~~~~---~p~~~-~CgH~fC~~Ci~~~~~~~~----~~CP~Cr~~ 62 (118)
T 3hct_A 17 SKYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDAG----HKCPVDNEI 62 (118)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHHC----SBCTTTCCB
T ss_pred CCCCCCcCChhhc---CeEEC-CcCChhhHHHHHHHHhhCC----CCCCCCCCC
Confidence 4457999998764 22444 6999999999864322211 389999753
No 115
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=37.53 E-value=27 Score=22.15 Aligned_cols=36 Identities=28% Similarity=0.517 Sum_probs=27.6
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ .....+|..|+.-.|.+|...-
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 46 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhc
Confidence 45679899876532 3467899999999999998754
No 116
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.32 E-value=8.4 Score=25.58 Aligned_cols=49 Identities=18% Similarity=0.529 Sum_probs=29.9
Q ss_pred CceecccCC-CCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGG-NYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~-~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
+..|++|.. .+.+...-+.=-.|+.-||..|+.-.... ....||.|+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 52 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR----GAGNCPECGTP 52 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT----TSSSCTTTCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc----CCCcCCCCCCc
Confidence 356999988 44322111111378889999998743221 23589999864
No 117
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=36.59 E-value=19 Score=25.65 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=21.6
Q ss_pred CCceecccCCCC--CCCCCeEeccCCCCeeecc
Q 026373 182 SETLCGSCGGNY--NADEFWIGCDICERWFHGK 212 (239)
Q Consensus 182 ~~~~C~~C~~~~--~~d~~mIqCD~C~~WfH~~ 212 (239)
+...|+.|+.+- ..++..+.|..|+.+|=..
T Consensus 7 eiL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (69)
T 2pk7_A 7 DILACPICKGPLKLSADKTELISKGAGLAYPIR 39 (69)
T ss_dssp GTCCCTTTCCCCEECTTSSEEEETTTTEEEEEE
T ss_pred hheeCCCCCCcCeEeCCCCEEEcCCCCcEecCc
Confidence 345799998753 2345677899999888553
No 118
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=36.33 E-value=16 Score=26.12 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=21.9
Q ss_pred CCceecccCCCC--CCCCCeEeccCCCCeeecc
Q 026373 182 SETLCGSCGGNY--NADEFWIGCDICERWFHGK 212 (239)
Q Consensus 182 ~~~~C~~C~~~~--~~d~~mIqCD~C~~WfH~~ 212 (239)
....|+.|+.+- +..+..+.|..|+.+|=..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (70)
T 2js4_A 7 DILVCPVCKGRLEFQRAQAELVCNADRLAFPVR 39 (70)
T ss_dssp CCCBCTTTCCBEEEETTTTEEEETTTTEEEEEE
T ss_pred hheECCCCCCcCEEeCCCCEEEcCCCCceecCC
Confidence 445799998753 2245677899999888654
No 119
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=35.95 E-value=13 Score=33.66 Aligned_cols=30 Identities=30% Similarity=0.699 Sum_probs=19.1
Q ss_pred CCceecccCCCC----------CCCCCeEeccCCCCeeec
Q 026373 182 SETLCGSCGGNY----------NADEFWIGCDICERWFHG 211 (239)
Q Consensus 182 ~~~~C~~C~~~~----------~~d~~mIqCD~C~~WfH~ 211 (239)
...+|++||... .++.-+..|-.|+.-+|.
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~ 220 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY 220 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEee
Confidence 345799998632 113347889999855554
No 120
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=35.17 E-value=17 Score=25.81 Aligned_cols=30 Identities=20% Similarity=0.204 Sum_probs=20.7
Q ss_pred CceecccCCCC--CCCCCeEeccCCCCeeecc
Q 026373 183 ETLCGSCGGNY--NADEFWIGCDICERWFHGK 212 (239)
Q Consensus 183 ~~~C~~C~~~~--~~d~~mIqCD~C~~WfH~~ 212 (239)
...|+.|+.+- +..+..+.|..|+.+|=..
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 39 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 35699998753 2245667799999888543
No 121
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=34.47 E-value=30 Score=24.39 Aligned_cols=35 Identities=20% Similarity=0.471 Sum_probs=28.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 218 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~ 218 (239)
..++|..|+.-- .....+|..|+.-.|.+|...-+
T Consensus 34 ~pt~C~~C~~~l--~~qG~kC~~C~~~cHkkC~~~V~ 68 (72)
T 2fnf_X 34 GPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 68 (72)
T ss_dssp SCCBCTTTSSBC--SSCCEECTTSSCEECTGGGGGCC
T ss_pred CCcchhhhhHHH--HhCcCccCCCCCeechhhhccCc
Confidence 557899998765 45678999999999999987543
No 122
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=34.35 E-value=18 Score=25.71 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=21.4
Q ss_pred CCceecccCCCC--CCCCCeEeccCCCCeeecc
Q 026373 182 SETLCGSCGGNY--NADEFWIGCDICERWFHGK 212 (239)
Q Consensus 182 ~~~~C~~C~~~~--~~d~~mIqCD~C~~WfH~~ 212 (239)
+...|+.|+.+- ......+.|..|+.+|=..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSRQAKLAYPIK 39 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 445799998753 2244667799999888543
No 123
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.11 E-value=19 Score=26.85 Aligned_cols=44 Identities=23% Similarity=0.483 Sum_probs=29.3
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|...+.+ -..+ -.|+.-|+..|+.-... ..||.|+..
T Consensus 21 ~~~~C~IC~~~~~~-pv~~--~~CgH~fC~~Ci~~~~~-------~~CP~Cr~~ 64 (117)
T 1jm7_B 21 KLLRCSRCTNILRE-PVCL--GGCEHIFCSNCVSDCIG-------TGCPVCYTP 64 (117)
T ss_dssp HTTSCSSSCSCCSS-CBCC--CSSSCCBCTTTGGGGTT-------TBCSSSCCB
T ss_pred hCCCCCCCChHhhC-ccEe--CCCCCHHHHHHHHHHhc-------CCCcCCCCc
Confidence 45679999887642 1222 25788899999864322 479999854
No 124
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=33.53 E-value=24 Score=23.30 Aligned_cols=13 Identities=23% Similarity=0.884 Sum_probs=10.2
Q ss_pred CCcEEcCCCcccc
Q 026373 224 IKQYKCPSCSMKR 236 (239)
Q Consensus 224 i~~y~Cp~C~~Kr 236 (239)
++.|.||.|...+
T Consensus 28 P~dw~CP~Cg~~k 40 (46)
T 6rxn_A 28 PDDWCCPVCGVSK 40 (46)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCcCCCCcH
Confidence 4679999998654
No 125
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.26 E-value=38 Score=24.19 Aligned_cols=36 Identities=22% Similarity=0.485 Sum_probs=28.0
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ .....+|..|..-.|-.|....
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTC
T ss_pred CCcChhhcChhhccccccccccCCcCCeeChhhhhhC
Confidence 56789999876432 3457899999999999998753
No 126
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=32.87 E-value=25 Score=22.60 Aligned_cols=34 Identities=24% Similarity=0.511 Sum_probs=26.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 218 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~ 218 (239)
..++|..|++.-- ...+|..|+.-.|.+|...-+
T Consensus 13 ~pt~C~~C~~~l~---qG~~C~~C~~~~H~~C~~~v~ 46 (52)
T 1faq_A 13 KLAFCDICQKFLL---NGFRCQTCGYKFHEHCSTKVP 46 (52)
T ss_dssp SCEECTTSSSEEC---SEEECTTTTCCBCSTTSSSSS
T ss_pred CCcCCCCcccccc---cCCEeCCCCCeEChhHHhhCc
Confidence 4578989987643 567899999999999987543
No 127
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=32.61 E-value=36 Score=24.03 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=28.8
Q ss_pred CCCceecccCCCCCC-CCCeEeccCCCCeeeccccccCc
Q 026373 181 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 218 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit~ 218 (239)
...++|..|++.--+ .....+|..|+.-.|-.|....+
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 70 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVI 70 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCC
T ss_pred CCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCc
Confidence 356889999875422 34568999999999999987543
No 128
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=32.18 E-value=19 Score=29.03 Aligned_cols=24 Identities=17% Similarity=0.541 Sum_probs=18.5
Q ss_pred ceecccCCCCCC-----CCCeEeccCCCC
Q 026373 184 TLCGSCGGNYNA-----DEFWIGCDICER 207 (239)
Q Consensus 184 ~~C~~C~~~~~~-----d~~mIqCD~C~~ 207 (239)
++|..|+.|+.. ..+++.|..|+.
T Consensus 103 VlC~~C~sPdT~l~k~~r~~~l~C~ACGa 131 (138)
T 1nee_A 103 VICHECNRPDTRIIREGRISLLKCEACGA 131 (138)
T ss_dssp HHHTCCSSCSSCCEEETTTTEEECSTTSC
T ss_pred EECCCCCCcCcEEEEcCCeEEEEccCCCC
Confidence 679999998754 456788888864
No 129
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=31.67 E-value=37 Score=23.02 Aligned_cols=36 Identities=28% Similarity=0.547 Sum_probs=27.5
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ .....+|..|+.-.|.+|...-
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 58 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKV 58 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTS
T ss_pred CCcCchhcChhheecCCcccccCCCCCccCHhHHhhC
Confidence 45789999876432 2456789999999999998754
No 130
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=31.64 E-value=18 Score=28.65 Aligned_cols=46 Identities=15% Similarity=0.375 Sum_probs=31.5
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
....|++|.....+ ..+ -.|+.-|+..|+.-.... ..+.||.|+..
T Consensus 77 ~~~~C~IC~~~~~~--pv~--~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 122 (150)
T 1z6u_A 77 QSFMCVCCQELVYQ--PVT--TECFHNVCKDCLQRSFKA----QVFSCPACRHD 122 (150)
T ss_dssp HHTBCTTTSSBCSS--EEE--CTTSCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred cCCEeecCChhhcC--CEE--cCCCCchhHHHHHHHHHh----CCCcCCCCCcc
Confidence 34579999887642 222 378999999998744321 23689999864
No 131
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.65 E-value=46 Score=23.90 Aligned_cols=36 Identities=31% Similarity=0.599 Sum_probs=27.9
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ .....+|..|+.-.|-+|...-
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v 63 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINV 63 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTS
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhc
Confidence 55789999875432 2466899999999999998754
No 132
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=30.54 E-value=26 Score=24.86 Aligned_cols=31 Identities=10% Similarity=-0.016 Sum_probs=21.4
Q ss_pred CCceecccCCCC--CCCCCeEeccCCCCeeecc
Q 026373 182 SETLCGSCGGNY--NADEFWIGCDICERWFHGK 212 (239)
Q Consensus 182 ~~~~C~~C~~~~--~~d~~mIqCD~C~~WfH~~ 212 (239)
+...|+.|+.+- +..+..+.|..|+.+|=..
T Consensus 9 eiL~CP~ck~~L~~~~~~g~LvC~~c~~~YPI~ 41 (67)
T 2jny_A 9 EVLACPKDKGPLRYLESEQLLVNERLNLAYRID 41 (67)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred HHhCCCCCCCcCeEeCCCCEEEcCCCCccccCC
Confidence 456799998753 2245567799999888543
No 133
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=30.31 E-value=19 Score=29.31 Aligned_cols=24 Identities=21% Similarity=0.710 Sum_probs=18.3
Q ss_pred ceecccCCCCCC-----CCCeEeccCCCC
Q 026373 184 TLCGSCGGNYNA-----DEFWIGCDICER 207 (239)
Q Consensus 184 ~~C~~C~~~~~~-----d~~mIqCD~C~~ 207 (239)
++|..|+.|+.. ..+++.|..|+.
T Consensus 105 VlC~~C~sPdT~L~k~~r~~~l~C~ACGa 133 (148)
T 2d74_B 105 VICPVCGSPDTKIIKRDRFHFLKCEACGA 133 (148)
T ss_dssp SSCSSSCCTTCCCCBSSSSBCCCCSSSCC
T ss_pred EECCCCCCcCcEEEEeCCEEEEEecCCCC
Confidence 679999998754 456778888875
No 134
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=28.63 E-value=27 Score=35.02 Aligned_cols=30 Identities=30% Similarity=0.806 Sum_probs=21.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKC 213 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~C 213 (239)
.+.-|..||-.. -.-.|+|-.|++||-..-
T Consensus 10 ~~~~c~yc~~~~--~~~~~~c~~~~~wfcn~~ 39 (802)
T 2xzl_A 10 SDNSCAYCGIDS--AKCVIKCNSCKKWFCNTK 39 (802)
T ss_dssp --CCCTTTCCCC--TTTEEEETTTCCEEECCC
T ss_pred ChhhCcccCCCC--CceEEEeCCCCcEecCCC
Confidence 334688898764 358999999999996543
No 135
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=28.55 E-value=14 Score=30.15 Aligned_cols=50 Identities=22% Similarity=0.508 Sum_probs=36.1
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
++..|..|+.+..- ...-..|-.|..=+=.+|-..... ...|+|..|...
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~----~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPE----EQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSS----SSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccccCC----CCcEeeHHHHHH
Confidence 35679999998522 445788999998888888755432 246999999754
No 136
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=27.89 E-value=22 Score=26.31 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=31.1
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.+..|++|..... ..+. -.|+..||..|+.-..... ...||.|+..
T Consensus 22 ~~~~C~IC~~~~~---~p~~-~~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~ 67 (116)
T 1rmd_A 22 KSISCQICEHILA---DPVE-TSCKHLFCRICILRCLKVM----GSYCPSCRYP 67 (116)
T ss_dssp HHTBCTTTCSBCS---SEEE-CTTSCEEEHHHHHHHHHHT----CSBCTTTCCB
T ss_pred CCCCCCCCCcHhc---CcEE-cCCCCcccHHHHHHHHhHC----cCcCCCCCCC
Confidence 3467999988764 2333 3799999999986433221 2479999864
No 137
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=27.15 E-value=40 Score=24.00 Aligned_cols=45 Identities=20% Similarity=0.409 Sum_probs=23.3
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
....|.+|+-.|++..-.- -++..-|..-..+ ++.|.||.|...+
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp--------~~gi~pGT~f~~l--Pddw~CP~Cga~K 50 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDK--------FAGIPPGTPFVDL--SDSFMCPACRSPK 50 (70)
T ss_dssp SCEEETTTCCEECTTTCCT--------TTTCCSSCCGGGS--CTTCBCTTTCCBG
T ss_pred ceEEeCCCCEEEcCCCCCc--------ccCcCCCCchhhC--CCCCcCCCCCCCH
Confidence 3456777877665421100 0222223322333 3679999998643
No 138
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=26.89 E-value=34 Score=22.62 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=24.8
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeeccccccC
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit 217 (239)
+.|-.|++..- .+ .+|..|+-=.|.+|...-
T Consensus 15 t~C~~C~k~i~-~G--~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 15 QVCNVCQKSMI-FG--VKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCCSSSCCSSC-CE--EEETTTTEEESSSCTTTS
T ss_pred cCccccCceeE-Cc--CCCCCCCCccchhhcCcC
Confidence 56989988764 22 789999999999998743
No 139
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=26.88 E-value=62 Score=25.61 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=13.3
Q ss_pred hcHHHHHHHHHHhhcc
Q 026373 96 TDSWLLSVAFYLGARL 111 (239)
Q Consensus 96 ~d~wl~~~a~~~~a~~ 111 (239)
-|+|++++|.-.++.+
T Consensus 85 ~D~~lIaLA~~l~~~l 100 (165)
T 2lcq_A 85 ADIEVLALAYELKGEI 100 (165)
T ss_dssp HHHHHHHHHHHHTCCE
T ss_pred HHHHHHHhHHHhCCeE
Confidence 5799999999888765
No 140
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=26.27 E-value=17 Score=28.82 Aligned_cols=29 Identities=31% Similarity=0.675 Sum_probs=18.9
Q ss_pred CCceecccCCCCCC------CCCeEeccCCCCeeec
Q 026373 182 SETLCGSCGGNYNA------DEFWIGCDICERWFHG 211 (239)
Q Consensus 182 ~~~~C~~C~~~~~~------d~~mIqCD~C~~WfH~ 211 (239)
.-..| -||..|.- .+..|+|..|..||..
T Consensus 111 f~~~C-rCG~~f~i~~~~l~~~~~v~C~sCSl~~~v 145 (155)
T 2l6l_A 111 FYLSC-RCGGKYSVSKDEAEEVSLISCDTCSLIIEL 145 (155)
T ss_dssp EEEEC-SSSCEEEEETTHHHHCCEEECSSSSCEEEE
T ss_pred EEEcC-CCCCeEEecHHHhCCCCEEECCCCceEEEE
Confidence 33456 48865421 1267999999999854
No 141
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=25.74 E-value=20 Score=28.92 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=16.0
Q ss_pred CceecccCCCCCC-----CCCeEeccCCCC
Q 026373 183 ETLCGSCGGNYNA-----DEFWIGCDICER 207 (239)
Q Consensus 183 ~~~C~~C~~~~~~-----d~~mIqCD~C~~ 207 (239)
-++|..|+.|+.. ..+++.|..|+.
T Consensus 103 yVlC~~C~sPdT~l~k~~r~~~l~C~ACGa 132 (139)
T 3cw2_K 103 YVECSTCKSLDTILKKEKKSWYIVCLACGA 132 (139)
T ss_dssp CSSCCSSSSSCCCSCSSCSTTTSSCCC---
T ss_pred eeECCCCCCcCcEEEEeCCeEEEEecCCCC
Confidence 3779999988643 445677888764
No 142
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=25.59 E-value=40 Score=22.98 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=27.4
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ .....+|..|+.-.|.+|...-
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 59 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLL 59 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHS
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhC
Confidence 45779999876421 2356889999999999998754
No 143
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=25.23 E-value=50 Score=22.11 Aligned_cols=13 Identities=23% Similarity=0.807 Sum_probs=10.1
Q ss_pred CCcEEcCCCcccc
Q 026373 224 IKQYKCPSCSMKR 236 (239)
Q Consensus 224 i~~y~Cp~C~~Kr 236 (239)
.+.|.||.|...+
T Consensus 33 P~dw~CP~Cg~~K 45 (52)
T 1yk4_A 33 PDDWVCPLCGAPK 45 (52)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCCCCCCCH
Confidence 3679999998644
No 144
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=25.10 E-value=28 Score=27.46 Aligned_cols=45 Identities=22% Similarity=0.308 Sum_probs=31.8
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
....|++|..... .-|++ .|+.-|...|+.-...... ..||.|+.
T Consensus 17 ~~~~C~IC~~~~~---~pv~~-~CgH~fC~~Ci~~~~~~~~----~~CP~Cr~ 61 (170)
T 3hcs_A 17 SKYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDAG----HKCPVDNE 61 (170)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHHC----SBCTTTCC
T ss_pred CCCCCCCCChhhc---CcEEC-CCCCHHHHHHHHHHHHhCC----CCCCCCcc
Confidence 4567999998764 34666 6999999999875332211 38999975
No 145
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=24.55 E-value=54 Score=19.88 Aligned_cols=9 Identities=44% Similarity=1.128 Sum_probs=6.4
Q ss_pred cEEcCCCcc
Q 026373 226 QYKCPSCSM 234 (239)
Q Consensus 226 ~y~Cp~C~~ 234 (239)
.|.|+.|..
T Consensus 32 ~~~C~~C~~ 40 (57)
T 3uk3_C 32 PYKCEFCEY 40 (57)
T ss_dssp CEECSSSSC
T ss_pred CcCCCCCcc
Confidence 478888764
No 146
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=24.41 E-value=21 Score=26.89 Aligned_cols=21 Identities=38% Similarity=0.759 Sum_probs=19.6
Q ss_pred HHhhccChHHHHHHHHhhhcC
Q 026373 106 YLGARLNRNERKRLFSLINDQ 126 (239)
Q Consensus 106 ~~~a~~~~~~r~rlf~miNdl 126 (239)
|+|..|..++..+.|.++||.
T Consensus 61 FyG~~Lp~~EaeKVFELLNdF 81 (95)
T 2k5c_A 61 FYGKTLPRREAEKVFELLNDF 81 (95)
T ss_dssp EETTSSCTTTHHHHHHHHHSC
T ss_pred HhcccCChHHHHHHHHHHHHc
Confidence 789999999999999999997
No 147
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.20 E-value=27 Score=23.70 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=28.3
Q ss_pred CceecccCCCCCC------------CCCeEeccCCCCeeeccccc---cCccccCCCCcEEcCCCccc
Q 026373 183 ETLCGSCGGNYNA------------DEFWIGCDICERWFHGKCVK---ITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 183 ~~~C~~C~~~~~~------------d~~mIqCD~C~~WfH~~CVg---it~~~a~~i~~y~Cp~C~~K 235 (239)
...|..|++.+.. +.....|+.|+..|-..-.= +..-.......|.|+.|...
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~ 74 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG 74 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCC
T ss_pred CeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccch
Confidence 3467788775432 33456889998877432210 00000010145899999753
No 148
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=24.18 E-value=49 Score=22.35 Aligned_cols=36 Identities=28% Similarity=0.517 Sum_probs=27.1
Q ss_pred CCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 182 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 182 ~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
..++|..|+..--+ ...-.+|..|+.-.|-+|...-
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 55 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 55 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCcccccChhhhccCceeeECCCCCCeEchhHhhhC
Confidence 45679899875321 3456899999999999998754
No 149
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=23.72 E-value=34 Score=26.37 Aligned_cols=51 Identities=20% Similarity=0.334 Sum_probs=26.1
Q ss_pred ceecccCCCCCCCCCeEeccCCCCeeec--ccccc----CccccCCCCcEEcCCCcc
Q 026373 184 TLCGSCGGNYNADEFWIGCDICERWFHG--KCVKI----TPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 184 ~~C~~C~~~~~~d~~mIqCD~C~~WfH~--~CVgi----t~~~a~~i~~y~Cp~C~~ 234 (239)
..|+.|+++-..++....|+.|+.=|-. -|=.- ..-.+=....|+|..|..
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC~~chg 89 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHG 89 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEETTTTE
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhhccCCc
Confidence 4688888764333345568888764322 22111 111111113588888874
No 150
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=23.35 E-value=18 Score=27.86 Aligned_cols=25 Identities=24% Similarity=0.631 Sum_probs=18.6
Q ss_pred ceecccCC---------CCCCCCCeEeccCCCCe
Q 026373 184 TLCGSCGG---------NYNADEFWIGCDICERW 208 (239)
Q Consensus 184 ~~C~~C~~---------~~~~d~~mIqCD~C~~W 208 (239)
-.|-.|+. .|..+.-.|+|+.|..|
T Consensus 14 FTC~~C~tRs~k~iSk~aY~~GvViv~C~gC~n~ 47 (100)
T 2e2z_A 14 FTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVR 47 (100)
T ss_dssp EEETTTTEEEEEEEEHHHHHTSEEEEECTTTCCE
T ss_pred EEccCCCCcchhhcCHHHhhCCEEEEEcCCCccc
Confidence 45777864 45557789999999875
No 151
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=23.08 E-value=22 Score=26.67 Aligned_cols=27 Identities=26% Similarity=0.551 Sum_probs=18.7
Q ss_pred ceecccCCCCCC-------CCCeEeccCCCCeeec
Q 026373 184 TLCGSCGGNYNA-------DEFWIGCDICERWFHG 211 (239)
Q Consensus 184 ~~C~~C~~~~~~-------d~~mIqCD~C~~WfH~ 211 (239)
-.| -||..+.- +...++|+.|.-|...
T Consensus 24 ypC-rCGd~F~IteedLe~ge~iv~C~sCSL~IkV 57 (89)
T 2jr7_A 24 YPC-PCGDNFSITKEDLENGEDVATCPSCSLIIKV 57 (89)
T ss_dssp EEC-TTSSEEEEEHHHHHHTCCEEECTTTCCEEEE
T ss_pred EcC-CCCCEEEECHHHHhCCCEEEECCCCccEEEE
Confidence 346 48765421 4578999999999754
No 152
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=22.97 E-value=36 Score=22.88 Aligned_cols=35 Identities=20% Similarity=0.471 Sum_probs=27.6
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 218 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~ 218 (239)
..++|..|+.-- .....+|..|+.-.|.+|...-+
T Consensus 21 ~pt~C~~C~~~i--~kqg~kC~~C~~~cH~kC~~~v~ 55 (59)
T 1rfh_A 21 GPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 55 (59)
T ss_dssp CCEECTTTCSEE--CSCCEECTTTSCEECHHHHTTCC
T ss_pred CCeEchhcchhh--hhCccEeCCCCCeEehhhhhhCc
Confidence 557898998765 45678999999999999987543
No 153
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=22.94 E-value=34 Score=21.88 Aligned_cols=24 Identities=38% Similarity=0.702 Sum_probs=18.3
Q ss_pred HHHHHHhhhHHHHH-HHhhhcHHHh
Q 026373 12 EIYKDFCARRAGVV-RALTNDVDEF 35 (239)
Q Consensus 12 ~~~~~~~~rr~~~~-~alt~~~~~~ 35 (239)
+=|.+|-.|=+-+| |||.++++-|
T Consensus 13 ~~F~~F~~rsskviERAL~e~yDi~ 37 (38)
T 3l9k_W 13 ENFQRFVVRAGRVIERALSENVDIY 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHccccccc
Confidence 34889988888776 8998876644
No 154
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=22.43 E-value=23 Score=27.79 Aligned_cols=45 Identities=16% Similarity=0.421 Sum_probs=32.0
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 234 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~ 234 (239)
....|++|..... .-++. .|+.-|+..|+.--... ....||.|+.
T Consensus 30 ~~~~C~IC~~~~~---~pv~~-~CgH~FC~~Ci~~~~~~----~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLR---RPFQA-QCGHRYCSFCLASILSS----GPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHGGG----SCEECHHHHH
T ss_pred cCcCCCCCChhhc---CcEEC-CCCCccCHHHHHHHHhc----CCCCCCCCCC
Confidence 4567999988764 23554 89999999998753321 2368999975
No 155
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=22.41 E-value=31 Score=23.45 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=21.6
Q ss_pred CCceecccCCCCCCCCCeEecc--CCCCeeecc
Q 026373 182 SETLCGSCGGNYNADEFWIGCD--ICERWFHGK 212 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD--~C~~WfH~~ 212 (239)
+...|+.|+.+-..+...+.|. .|+.+|-..
T Consensus 9 ~iL~CP~c~~~L~~~~~~L~C~~~~c~~~YPI~ 41 (56)
T 2kpi_A 9 EILACPACHAPLEERDAELICTGQDCGLAYPVR 41 (56)
T ss_dssp TSCCCSSSCSCEEEETTEEEECSSSCCCEEEEE
T ss_pred hheeCCCCCCcceecCCEEEcCCcCCCcEEeeE
Confidence 4457999988633233667799 899888653
No 156
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=22.28 E-value=90 Score=23.77 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=21.7
Q ss_pred EeccCCCCeeeccccccCccccCCCCcEEc
Q 026373 200 IGCDICERWFHGKCVKITPAKAENIKQYKC 229 (239)
Q Consensus 200 IqCD~C~~WfH~~CVgit~~~a~~i~~y~C 229 (239)
+.|..|..-||..|..-...... .+.|+|
T Consensus 70 ~~C~~Cp~sfC~~c~~g~l~~~~-~~~~~c 98 (107)
T 4gne_A 70 SFCEFCPHSFCKDHEKGALVPSA-LEGRLC 98 (107)
T ss_dssp EECSSSSCEECTTTCTTSCEECT-TTTCEE
T ss_pred cCcCCCCcchhhhccCCcceecC-CCCcee
Confidence 78999999999999975443222 356877
No 157
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.06 E-value=66 Score=22.20 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=30.4
Q ss_pred hhhhhhhhh------cHHHHHHHHHHhhccChHHHHHHHHhhhc
Q 026373 88 WLSLVAVHT------DSWLLSVAFYLGARLNRNERKRLFSLIND 125 (239)
Q Consensus 88 wl~~vavh~------d~wl~~~a~~~~a~~~~~~r~rlf~miNd 125 (239)
.+.+|..|- ..| -.||-+++.|-.+..|.|-+..+..
T Consensus 19 L~~~v~~~g~~~~~~~~W-~~IA~~~~~Rt~~qcr~r~~~~l~~ 61 (75)
T 2yum_A 19 LEQLLIKYPPEEVESRRW-QKIADELGNRTAKQVASQVQKYFIK 61 (75)
T ss_dssp HHHHHHHSCCCSCHHHHH-HHHHHHHSSSCHHHHHHHHHHHHGG
T ss_pred HHHHHHHhCCCCCCcccH-HHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 466788887 789 6678888999999999998877764
No 158
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=21.65 E-value=54 Score=24.13 Aligned_cols=45 Identities=20% Similarity=0.434 Sum_probs=24.2
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
....|.+|+-.|++..-.-. .+..-|..-.. .++.|.||.|...+
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~--------~gI~pGT~fed--lPddW~CPvCga~K 70 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPE--------DGIAAGTRWDD--IPDDWSCPDCGAAK 70 (81)
T ss_dssp CEEEETTTCCEEETTTCBTT--------TTBCTTCCTTT--SCTTCCCTTTCCCG
T ss_pred ceEEeCCCCEEEcCCcCCcc--------cCcCCCCChhH--CCCCCcCCCCCCCH
Confidence 45778889887764211100 11222222222 23679999998643
No 159
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.62 E-value=22 Score=25.02 Aligned_cols=37 Identities=19% Similarity=0.542 Sum_probs=27.5
Q ss_pred CCCceecccCCCCCC-CCCeEeccCCCCeeeccccccC
Q 026373 181 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 217 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~-d~~mIqCD~C~~WfH~~CVgit 217 (239)
...++|..|+..--. ...-.+|..|+.-.|.+|+..-
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v 63 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYV 63 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGG
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhhC
Confidence 356889999875421 1245799999999999998753
No 160
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=21.36 E-value=36 Score=27.53 Aligned_cols=25 Identities=28% Similarity=0.824 Sum_probs=19.2
Q ss_pred ceecccCCCCCC-CCCeEeccCCC-Ce
Q 026373 184 TLCGSCGGNYNA-DEFWIGCDICE-RW 208 (239)
Q Consensus 184 ~~C~~C~~~~~~-d~~mIqCD~C~-~W 208 (239)
..|+.|+..|.- ++.+.-|..|. +|
T Consensus 28 P~CP~C~seytYeDg~l~vCPeC~hEW 54 (138)
T 2akl_A 28 PPCPQCNSEYTYEDGALLVCPECAHEW 54 (138)
T ss_dssp CCCTTTCCCCCEECSSSEEETTTTEEE
T ss_pred CCCCCCCCcceEecCCeEECCcccccc
Confidence 569999987643 56677899998 77
No 161
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=21.05 E-value=23 Score=26.24 Aligned_cols=27 Identities=22% Similarity=0.511 Sum_probs=18.7
Q ss_pred ceecccCCCCC-------CCCCeEeccCCCCeeec
Q 026373 184 TLCGSCGGNYN-------ADEFWIGCDICERWFHG 211 (239)
Q Consensus 184 ~~C~~C~~~~~-------~d~~mIqCD~C~~WfH~ 211 (239)
-.| -||..+. .+...++|+.|.-|...
T Consensus 24 ypC-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V 57 (83)
T 1yop_A 24 YPC-PCGDRFQIYLDDMFEGEKVAVCPSCSLMIDV 57 (83)
T ss_dssp EEE-TTTEEEEEEHHHHHTTCCEEECSSSCCEEEC
T ss_pred EeC-CCCCeEEECHHHHhCCCEEEECCCCccEEEE
Confidence 346 4885441 25679999999998654
No 162
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=21.03 E-value=37 Score=25.77 Aligned_cols=51 Identities=18% Similarity=0.577 Sum_probs=35.4
Q ss_pred CCceecccCCCC---CCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNY---NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~---~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
...+|-+|+..- .+++.+|.|..|..=.--.|.-....+. .-.||.|..+-
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG----~q~CpqCktrY 68 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREG----TQNCPQCKTRY 68 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTS----CSSCTTTCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhcc----CccccccCCcc
Confidence 456899998642 2267899999998776777776644332 24799998543
No 163
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=21.00 E-value=56 Score=24.38 Aligned_cols=45 Identities=18% Similarity=0.308 Sum_probs=24.7
Q ss_pred CCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCcccc
Q 026373 182 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 236 (239)
Q Consensus 182 ~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~Kr 236 (239)
....|.+|+-.|++..-.- -++..-|..-..+ .+.|.||.|...+
T Consensus 34 ~~y~C~vCGyvYD~~~Gdp--------~~gI~pGT~fedl--PddW~CPvCga~K 78 (87)
T 1s24_A 34 LKWICITCGHIYDEALGDE--------AEGFTPGTRFEDI--PDDWCCPDCGATK 78 (87)
T ss_dssp CEEEETTTTEEEETTSCCT--------TTTCCSCCCGGGC--CTTCCCSSSCCCG
T ss_pred ceEECCCCCeEecCCcCCc--------ccCcCCCCChhHC--CCCCCCCCCCCCH
Confidence 4577989987776421110 1222333332333 3679999998643
No 164
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=20.86 E-value=1e+02 Score=22.52 Aligned_cols=46 Identities=4% Similarity=-0.266 Sum_probs=29.7
Q ss_pred CCCceecccCCCCCCCCCeEeccCCCCeeeccccccCccccCCCCcEEcCCCccc
Q 026373 181 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 235 (239)
Q Consensus 181 ~~~~~C~~C~~~~~~d~~mIqCD~C~~WfH~~CVgit~~~a~~i~~y~Cp~C~~K 235 (239)
.....|++|..... +..+- .|+.-|-..|+.---. ....||.|...
T Consensus 27 p~~~~CpI~~~~m~--dPV~~--~cGhtf~r~~I~~~l~-----~~~~cP~~~~~ 72 (100)
T 2kre_A 27 PDEFRDPLMDTLMT--DPVRL--PSGTIMDRSIILRHLL-----NSPTDPFNRQT 72 (100)
T ss_dssp STTTBCTTTCSBCS--SEEEE--TTTEEEEHHHHHHHTT-----SCSBCSSSCCB
T ss_pred cHhhCCcCccCccc--CCeEC--CCCCEEchHHHHHHHH-----cCCCCCCCCCC
Confidence 45678999988764 23332 2787788888763322 13689999753
No 165
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=20.49 E-value=69 Score=19.34 Aligned_cols=9 Identities=33% Similarity=1.180 Sum_probs=6.3
Q ss_pred cEEcCCCcc
Q 026373 226 QYKCPSCSM 234 (239)
Q Consensus 226 ~y~Cp~C~~ 234 (239)
.|.|+.|..
T Consensus 29 ~~~C~~C~~ 37 (57)
T 1bbo_A 29 PYHCTYCNF 37 (57)
T ss_dssp CEECSSSSC
T ss_pred CccCCCCCc
Confidence 477877764
No 166
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.43 E-value=58 Score=22.90 Aligned_cols=13 Identities=23% Similarity=0.705 Sum_probs=7.5
Q ss_pred CeEeccCCCCeee
Q 026373 198 FWIGCDICERWFH 210 (239)
Q Consensus 198 ~mIqCD~C~~WfH 210 (239)
....|+.|+..|-
T Consensus 65 ~~~~C~~C~~~f~ 77 (124)
T 2dlq_A 65 QVFTCSVCQETFR 77 (124)
T ss_dssp CCEECSSSCCEES
T ss_pred CCeECCCCCCccC
Confidence 3456666666553
No 167
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=20.08 E-value=70 Score=21.62 Aligned_cols=13 Identities=23% Similarity=0.897 Sum_probs=10.1
Q ss_pred CCcEEcCCCcccc
Q 026373 224 IKQYKCPSCSMKR 236 (239)
Q Consensus 224 i~~y~Cp~C~~Kr 236 (239)
.+.|.||.|...+
T Consensus 34 P~dw~CP~Cga~K 46 (55)
T 2v3b_B 34 PADWVCPDCGVGK 46 (55)
T ss_dssp CTTCCCTTTCCCG
T ss_pred CCCCcCCCCCCCH
Confidence 3679999998644
Done!