BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026374
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQ
QLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL
PAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCK
NHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF

High Scoring Gene Products

Symbol, full name Information P value
AT3G44150 protein from Arabidopsis thaliana 2.0e-86
AT3G11800 protein from Arabidopsis thaliana 3.6e-73
AT2G15910 protein from Arabidopsis thaliana 4.5e-59
AT3G48630 protein from Arabidopsis thaliana 3.9e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026374
        (239 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081413 - symbol:AT3G44150 "AT3G44150" species...   864  2.0e-86   1
TAIR|locus:2081571 - symbol:AT3G11800 "AT3G11800" species...   739  3.6e-73   1
TAIR|locus:2044606 - symbol:AT2G15910 "AT2G15910" species...   606  4.5e-59   1
TAIR|locus:2114500 - symbol:AT3G48630 "AT3G48630" species...   163  3.9e-12   1


>TAIR|locus:2081413 [details] [associations]
            symbol:AT3G44150 "AT3G44150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AY065371 EMBL:AY150454 IPI:IPI00526083 RefSeq:NP_190001.2
            UniGene:At.28512 PaxDb:Q8VZ18 PRIDE:Q8VZ18
            EnsemblPlants:AT3G44150.1 GeneID:823536 KEGG:ath:AT3G44150
            TAIR:At3g44150 eggNOG:NOG252192 HOGENOM:HOG000006161
            InParanoid:Q8VZ18 OMA:QNLHWKK PhylomeDB:Q8VZ18
            ProtClustDB:CLSN2917961 Genevestigator:Q8VZ18 Uniprot:Q8VZ18
        Length = 246

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 156/219 (71%), Positives = 181/219 (82%)

Query:    21 SSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNNSQQLSPCDRRLSLSSSTSQIAV 80
             S + N +YSPC DT+++RSDG              +N +  LSPCDRRLSL++  SQ +V
Sbjct:    28 SGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSV 87

Query:    81 FRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEF 140
             FRPK+DEISLL+INTS+F PDNYGGYMVAFAGRKYAARS+PAF+ANST+ VTSFTL +EF
Sbjct:    88 FRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEF 147

Query:   141 KKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTD 200
             +KGRLQNLYWKRDGC+ C GN NFVCLN QDCAIR+ SCK  GG+VDCSLGIQLAFSGTD
Sbjct:   148 QKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTD 207

Query:   201 KHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
             KHL+VLNSWYEVENL+QYSLYGLYSNL+ SLT Q+N  F
Sbjct:   208 KHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246


>TAIR|locus:2081571 [details] [associations]
            symbol:AT3G11800 "AT3G11800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR HOGENOM:HOG000006161 EMBL:AY046012
            EMBL:AY079399 IPI:IPI00537311 RefSeq:NP_566401.1 UniGene:At.18737
            PaxDb:Q94AI8 PRIDE:Q94AI8 EnsemblPlants:AT3G11800.1 GeneID:820353
            KEGG:ath:AT3G11800 TAIR:At3g11800 eggNOG:NOG287287
            InParanoid:Q94AI8 OMA:SWYEVAN PhylomeDB:Q94AI8
            ProtClustDB:CLSN2914959 ArrayExpress:Q94AI8 Genevestigator:Q94AI8
            Uniprot:Q94AI8
        Length = 246

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 145/227 (63%), Positives = 169/227 (74%)

Query:    20 ESSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNN---SQQLSPCDRR-LSLSSST 75
             E+ DNN +YSPC D+ V   DG                N   S Q SPCD R LSL+ + 
Sbjct:    21 EAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNGN- 79

Query:    76 SQIAVFRPKVDEISLLTINTSS---FSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVT 132
             S++AVFRPKVDEI+LLTINTSS   F PD   GYMVAFAG KYAARSLP  VA+S + VT
Sbjct:    80 SEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIVT 139

Query:   133 SFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGI 192
             SFTL LEF+KGRL+N++WK+DGCSKCSG+S FVCLN ++CAI+  +CKN GG VDCSLGI
Sbjct:   140 SFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLGI 199

Query:   193 QLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
             QLAFSGTDKH + LNSWYEV NL+QYSLYGLYSNL+DSLT  +  IF
Sbjct:   200 QLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246


>TAIR|locus:2044606 [details] [associations]
            symbol:AT2G15910 "AT2G15910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006438 InterPro:IPR007872
            Pfam:PF05207 PROSITE:PS51074 KO:K15455 IPI:IPI00530646 PIR:F84534
            RefSeq:NP_179191.1 UniGene:At.48478 UniGene:At.48479
            ProteinModelPortal:Q9XIM2 SMR:Q9XIM2 PRIDE:Q9XIM2
            EnsemblPlants:AT2G15910.1 GeneID:816087 KEGG:ath:AT2G15910
            TAIR:At2g15910 HOGENOM:HOG000153857 InParanoid:Q9XIM2 OMA:EEIANCP
            PhylomeDB:Q9XIM2 ProtClustDB:CLSN2913165 Genevestigator:Q9XIM2
            Uniprot:Q9XIM2
        Length = 367

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 119/226 (52%), Positives = 157/226 (69%)

Query:    19 VESSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNNSQQLSPCDRRLSLSSSTSQI 78
             V ++DNN +YSPC DT++ + DG              L+  Q LSPCD RL L++  +Q+
Sbjct:   140 VGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQ-LSPCDTRLGLAAKMAQL 198

Query:    79 AVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLA- 137
             A+FRPKVDEISLL+I+TS F+P   GG+MV FAG KYAARS P  VA+ + T+T+FTL  
Sbjct:   199 ALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVM 258

Query:   138 --------LEFKKGRLQNLYWKRDGCSKC--SGNSNFVCLNNQDCAIRSTSCKNHGGSVD 187
                     LEF+KG LQNL+WK  GC  C  +G+S+ VCLN  DCA+ ++ CK +GG  +
Sbjct:   259 KLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQAN 318

Query:   188 CSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTG 233
             C++GIQ+AFSGTD++L  LN+WYEV NLRQYSL  LY+N  DSL+G
Sbjct:   319 CNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364


>TAIR|locus:2114500 [details] [associations]
            symbol:AT3G48630 "AT3G48630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 IPI:IPI00938632 RefSeq:NP_190432.4
            UniGene:At.65260 DNASU:824023 EnsemblPlants:AT3G48630.1
            GeneID:824023 KEGG:ath:AT3G48630 Uniprot:F4JF36
        Length = 128

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 31/52 (59%), Positives = 38/52 (73%)

Query:   106 YMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSK 157
             Y V   G +  +   PAF+ANST+ VTSFT  +EF+KGRLQNLYWKRD C+K
Sbjct:     2 YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      239       211   0.00081  112 3  11 22  0.38    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.42u 0.11s 16.53t   Elapsed:  00:00:00
  Total cpu time:  16.42u 0.11s 16.53t   Elapsed:  00:00:00
  Start:  Fri May 10 10:07:26 2013   End:  Fri May 10 10:07:26 2013

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