BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026377
(239 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 13 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 72
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 73 KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 132
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 133 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 192
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 193 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 227
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 73
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 74 KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 133
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 134 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 193
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 194 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 15 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 74
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 75 KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 134
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 135 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 194
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 195 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 229
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 73
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 74 KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 133
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 134 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 193
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 194 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 73
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 74 KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 133
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 134 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 193
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 194 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 382 bits (982), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 73
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYV+RGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 74 KSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 133
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 134 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 193
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 194 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 382 bits (981), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/215 (83%), Positives = 195/215 (90%)
Query: 18 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77
I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGG
Sbjct: 14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGG 73
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
K PDTNYLFMGDYV+RGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDEC
Sbjct: 74 KSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDEC 133
Query: 138 LRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
LRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEVPHEG
Sbjct: 134 LRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG 193
Query: 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEF 232
PMCDLLWSDPDDR GWGISPRGAGYTFGQ + F
Sbjct: 194 PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 233 bits (594), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 36 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 95
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 96 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 154
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 155 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 214
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 215 PDKDVLGWGENDRGVSFTFGAEVVAKFL 242
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 233 bits (594), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 148
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 149 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 209 PDKDVLGWGENDRGVSFTFGAEVVAKFL 236
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 233 bits (593), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 30 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 148
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 149 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 209 PDKDVQGWGENDRGVSFTFGAEVVAKFL 236
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 233 bits (593), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 25 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 84
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 85 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 143
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 144 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 203
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 204 PDKDVLGWGENDRGVSFTFGAEVVAKFL 231
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 30 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 148
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 149 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 209 PDKDVQGWGENDRGVSFTFGAEVVAKFL 236
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 31 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 90
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 91 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 149
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 150 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 209
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 210 PDKDVQGWGENDRGVSFTFGAEVVAKFL 237
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 29 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 88
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 147
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 148 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 207
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 208 PDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 29 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 88
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 147
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 148 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 207
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 208 PDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLF 86
L+E +++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF+ GG P++NYLF
Sbjct: 29 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 88
Query: 87 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI 146
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 147
Query: 147 WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206
WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R +VP +G +CDLLWSD
Sbjct: 148 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 207
Query: 207 PD-DRCGWGISPRGAGYTFGQVLYSEFL 233
PD D GWG + RG +TFG + ++FL
Sbjct: 208 PDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 158/225 (70%), Gaps = 10/225 (4%)
Query: 18 ISQLMQ---CKP-----LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL 69
I++L++ C+P ++E +V+ LC K++EI + + + +++P+ ICGDIHGQ+ DL
Sbjct: 15 ITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDL 74
Query: 70 AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 129
LF+ GG P+ NYLF+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I +
Sbjct: 75 LRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINR 134
Query: 130 VYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 189
+YGFYDEC R++ N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ IR R
Sbjct: 135 IYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 193
Query: 190 VQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVLYSEFL 233
+VP G +CDLLWSDPD D GWG + RG +TFG + S+FL
Sbjct: 194 PTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFL 238
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 107
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 108 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 167
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 168 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 226
Query: 199 MCDLLWSDP 207
MCD+LWSDP
Sbjct: 227 MCDILWSDP 235
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 197 bits (502), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 29 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 88
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 89 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 148
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 149 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 207
Query: 199 MCDLLWSDP 207
MCD+LWSDP
Sbjct: 208 MCDILWSDP 216
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 197 bits (502), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 134/223 (60%), Gaps = 9/223 (4%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 35 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 94
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 95 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 154
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 155 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 213
Query: 199 MCDLLWSDPDDRCG--------WGISPRGAGYTFGQVLYSEFL 233
MCD+LWSDP + G + RG Y + EFL
Sbjct: 214 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 256
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 197 bits (502), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 31 AHLMKEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 90
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 91 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 150
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 151 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 209
Query: 199 MCDLLWSDP 207
MCD+LWSDP
Sbjct: 210 MCDILWSDP 218
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 51 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 110
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 111 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 170
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 171 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 229
Query: 199 MCDLLWSDP 207
MCD+LWSDP
Sbjct: 230 MCDILWSDP 238
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 134/223 (60%), Gaps = 9/223 (4%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 107
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 108 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 167
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 168 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 226
Query: 199 MCDLLWSDPDDRCG--------WGISPRGAGYTFGQVLYSEFL 233
MCD+LWSDP + G + RG Y + EFL
Sbjct: 227 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 269
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 134/223 (60%), Gaps = 9/223 (4%)
Query: 19 SQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK 78
+ LM+ L E + + IL +E N+ + +PVT+CGDIHGQF DL +LF++GG
Sbjct: 28 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 87
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 88 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 147
Query: 139 RKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY ++ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 148 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 206
Query: 199 MCDLLWSDPDDRCG--------WGISPRGAGYTFGQVLYSEFL 233
MCD+LWSDP + G + RG Y + EFL
Sbjct: 207 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 249
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 31 QVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGD 89
QVK + K ++ E+ ++ + +T+CGD HGQF+DL +F++ G +TN Y+F GD
Sbjct: 193 QVKEVLSKLSTLV--ETTLKETEK-ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGD 249
Query: 90 YVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKI 149
+VDRG +SVE + L K+ YP +LRGNHE+ + Q+YGF E KY A ++++
Sbjct: 250 FVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYEL 308
Query: 150 FTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 208
F+++F++ PL + ++ +HGGL S TLD+IR +R ++ P GPMCDLLWSDP
Sbjct: 309 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQ 368
Query: 209 DRCGWGISPRGAGYTFGQVLYSEFL 233
+ G IS RG FG + FL
Sbjct: 369 PQNGRSISKRGVSCQFGPDVTKAFL 393
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 31 QVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGD 89
QVK + K ++ E+ ++ + +T+CGD HGQF+DL +F++ G +TN Y+F GD
Sbjct: 49 QVKEVLSKLSTLV--ETTLKETEK-ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGD 105
Query: 90 YVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKI 149
+VDRG +SVE + L K+ YP +LRGNHE+ + Q+YGF E KY A ++++
Sbjct: 106 FVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYEL 164
Query: 150 FTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 208
F+++F++ PL + ++ +HGGL S TLD+IR +R ++ P GPMCDLLWSDP
Sbjct: 165 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQ 224
Query: 209 DRCGWGISPRGAGYTFGQVLYSEFL 233
+ G IS RG FG + FL
Sbjct: 225 PQNGRSISKRGVSCQFGPDVTKAFL 249
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 31 QVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGD 89
QVK + K ++ E+ ++ + +T+CGD HGQF+DL +F++ G +TN Y+F GD
Sbjct: 40 QVKEVLSKLSTLV--ETTLKETEK-ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGD 96
Query: 90 YVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKI 149
+VDRG +SVE + L K+ YP +LRGNHE+ + Q+YGF E KY A ++++
Sbjct: 97 FVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYEL 155
Query: 150 FTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 208
F+++F++ PL + ++ +HGGL S TLD+IR +R ++ P GPMCDLLWSDP
Sbjct: 156 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQ 215
Query: 209 DRCGWGISPRGAGYTFGQVLYSEFL 233
+ G IS RG FG + FL
Sbjct: 216 PQNGRSISKRGVSCQFGPDVTKAFL 240
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 9/221 (4%)
Query: 21 LMQCKPLSEPQVKALCEKAKEILMEE------SNVQPVKSPVTICGDIHGQFHDLAELFQ 74
++ K L + V A+ A + +E N +++CGD HGQF+D+ LF+
Sbjct: 25 FLKGKYLPKKYVAAIISHADTLFRQEPSXVELENNSTPDVKISVCGDTHGQFYDVLNLFR 84
Query: 75 IGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 133
GK P YLF GD+VDRG +S E L LK+ +P + RGNHES ++YGF
Sbjct: 85 KFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNXNKIYGF 144
Query: 134 YDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQE 192
DEC KY + I+ F F+ PL L+ ++ HGGL S TL + +N DR +
Sbjct: 145 EDECKYKY-SQRIFNXFAQSFESLPLATLINNDYLVXHGGLPSDPSATLSDFKNIDRFAQ 203
Query: 193 VPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFL 233
P +G +LLW+DP + G G S RG G+ FG + FL
Sbjct: 204 PPRDGAFXELLWADPQEANGXGPSQRGLGHAFGPDITDRFL 244
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 56 VTICGDIHGQFHDLA-ELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQR 114
+ + GD+HG + +L +L IG + +GD VDRG +VE + L+ +P
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELIT-----FPW- 68
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANIW 147
+RGNHE I + L + GN N W
Sbjct: 69 FRAVRGNHEQMMI--------DGLSERGNVNHW 93
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 19/73 (26%)
Query: 128 TQVYGFYDECLRKYGNANIWKIF------------------TDLFDYFP-LTALVESEIF 168
T+ FY EC+R +GN W + ++ D+ P L L ++++F
Sbjct: 244 TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLF 303
Query: 169 CLHGGLSPSIETL 181
H G S E L
Sbjct: 304 VTHAGAGGSQEGL 316
>pdb|1AKJ|D Chain D, Complex Of The Human Mhc Class I Glycoprotein Hla-A2 And
The T Cell Coreceptor Cd8
pdb|1AKJ|E Chain E, Complex Of The Human Mhc Class I Glycoprotein Hla-A2 And
The T Cell Coreceptor Cd8
Length = 120
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 178 IETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLY 229
+ LD N E+ C +L S+P C W PRGA + +LY
Sbjct: 5 VSPLDRTWNLGETVEL-----KCQVLLSNPTSGCSWLFQPRGAAASPTFLLY 51
>pdb|1CD8|A Chain A, Crystal Structure Of A Soluble Form Of The Human T Cell
Co- Receptor Cd8 At 2.6 Angstroms Resolution
pdb|3QZW|G Chain G, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|H Chain H, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|I Chain I, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|J Chain J, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
Length = 114
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 178 IETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLY 229
+ LD N E+ C +L S+P C W PRGA + +LY
Sbjct: 5 VSPLDRTWNLGETVEL-----KCQVLLSNPTSGCSWLFQPRGAAASPTFLLY 51
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of
The Microtubule Destabilizer Kif2c Complexed With Mg-adp
pdb|1V8K|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of
The Microtubule Destabilizer Kif2c Complexed With
Mg-Amppnp
Length = 410
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 35/186 (18%)
Query: 35 LCEKAKEILMEESNVQP----VKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90
L +KAK ++E+S Q ++ + C D D+ ++ +G C + F
Sbjct: 227 LNKKAKLRVLEDSRQQVQVVGLQEYLVTCAD------DVIKMINMGSACRTSGQTFANSN 280
Query: 91 VDRGYYSVETVTLLVALKVRYPQRITI--LRGNH--------------ESRQITQVYGFY 134
R + + +L+ K R + ++ L GN E +I +
Sbjct: 281 SSRSHACFQ---ILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLAL 337
Query: 135 DECLRKYGNANIWKIF--TDLFDYFPLTALVESEIFCLHGGLSPSIE----TLDNIRNFD 188
EC+R G F + L + + E+ C+ +SP I TL+ +R D
Sbjct: 338 KECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYAD 397
Query: 189 RVQEVP 194
RV+E+
Sbjct: 398 RVKELS 403
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2
Length = 240
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 24/90 (26%)
Query: 60 GDIHGQFHDLAELFQIGGKCPDTNYLFMGD-------------YVDRGYYSVETVTLLVA 106
G I+ F D+ EL GG CPD +Y ++ D Y + Y SV L A
Sbjct: 82 GLINNAFEDMIEL---GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEA 138
Query: 107 LKVRYPQRITILRGNHESRQITQVYGFYDE 136
L+ P I++ ++ + FY E
Sbjct: 139 LRFLGPISISV--------AVSDDFAFYKE 160
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2
pdb|2GHU|A Chain A, Crystal Structure Of Falcipain-2 From Plasmodium
Falciparum
pdb|2GHU|B Chain B, Crystal Structure Of Falcipain-2 From Plasmodium
Falciparum
pdb|2GHU|C Chain C, Crystal Structure Of Falcipain-2 From Plasmodium
Falciparum
pdb|2GHU|D Chain D, Crystal Structure Of Falcipain-2 From Plasmodium
Falciparum
pdb|2OUL|A Chain A, The Structure Of Chagasin In Complex With A Cysteine
Protease Clarifies The Binding Mode And Evolution Of A
New Inhibitor Family
pdb|3BPF|A Chain A, Crystal Structure Of Falcipain-2 With Its Inhibitor, E64
pdb|3BPF|B Chain B, Crystal Structure Of Falcipain-2 With Its Inhibitor, E64
pdb|3BPF|C Chain C, Crystal Structure Of Falcipain-2 With Its Inhibitor, E64
pdb|3BPF|D Chain D, Crystal Structure Of Falcipain-2 With Its Inhibitor, E64
Length = 241
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 24/90 (26%)
Query: 60 GDIHGQFHDLAELFQIGGKCPDTNYLFMGD-------------YVDRGYYSVETVTLLVA 106
G I+ F D+ EL GG CPD +Y ++ D Y + Y SV L A
Sbjct: 83 GLINNAFEDMIEL---GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEA 139
Query: 107 LKVRYPQRITILRGNHESRQITQVYGFYDE 136
L+ P I++ ++ + FY E
Sbjct: 140 LRFLGPISISV--------AVSDDFAFYKE 161
>pdb|2R0V|A Chain A, Structure Of The Rsc4 Tandem Bromodomain Acetylated At K25
pdb|2R0V|B Chain B, Structure Of The Rsc4 Tandem Bromodomain Acetylated At K25
pdb|2R0V|C Chain C, Structure Of The Rsc4 Tandem Bromodomain Acetylated At K25
Length = 346
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 109 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN--------IWKIFTDLFDYFPLT 160
V P ++I++ N E Q +++Y F + L + NA+ I+K T L +YF
Sbjct: 235 VHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTLTNYF--N 292
Query: 161 ALVESEIF 168
L++ E F
Sbjct: 293 YLIQKEFF 300
>pdb|2R10|A Chain A, Structure Of An Acetylated Rsc4 Tandem Bromodomain Histone
Chimera
pdb|2R10|B Chain B, Structure Of An Acetylated Rsc4 Tandem Bromodomain Histone
Chimera
Length = 361
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 109 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN--------IWKIFTDLFDYFPLT 160
V P ++I++ N E Q +++Y F + L + NA+ I+K T L +YF
Sbjct: 250 VHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTLTNYF--N 307
Query: 161 ALVESEIF 168
L++ E F
Sbjct: 308 YLIQKEFF 315
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O82|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O83|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O83|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O84|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3O84|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3U16|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U16|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U17|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
pdb|3U17|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
Length = 544
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 23 QCKPLS-EPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD 81
Q +P+S + ++K + E+ +E+ E + + P T CG H+ +++F +
Sbjct: 362 QGRPISSDDEIKIVDEQYREVPEGEIGMLATRGPYTFCGYYQSPEHN-SQVFD------E 414
Query: 82 TNYLFMGDYVDR 93
NY + GD V R
Sbjct: 415 DNYYYSGDLVQR 426
>pdb|2R0Y|A Chain A, Structure Of The Rsc4 Tandem Bromodomain In Complex With
An Acetylated H3 Peptide
Length = 311
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 109 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN--------IWKIFTDLFDYFPLT 160
V P ++I++ N E Q +++Y F + L + NA+ I+K T L +YF
Sbjct: 200 VHSPXALSIVKQNLEIGQYSKIYDFIIDXLLVFQNAHIFNDPSALIYKDATTLTNYF--N 257
Query: 161 ALVESEIF 168
L++ E F
Sbjct: 258 YLIQKEFF 265
>pdb|3SBF|A Chain A, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|B Chain B, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|C Chain C, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|D Chain D, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
Length = 401
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ +L+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
>pdb|2R0S|A Chain A, Crystal Structure Of The Rsc4 Tandem Bromodomain
Length = 285
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 109 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN--------IWKIFTDLFDYFPLT 160
V P ++I++ N E Q +++Y F + L + NA+ I+K T L +YF
Sbjct: 194 VHSPXALSIVKQNLEIGQYSKIYDFIIDXLLVFQNAHIFNDPSALIYKDATTLTNYF--N 251
Query: 161 ALVESEIF 168
L++ E F
Sbjct: 252 YLIQKEFF 259
>pdb|3R25|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|C Chain C, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|D Chain D, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|E Chain E, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|F Chain F, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|G Chain G, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|H Chain H, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
Length = 401
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ +L+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
>pdb|3DFH|A Chain A, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|B Chain B, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|C Chain C, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
Length = 394
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ +L+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.141 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,308,366
Number of Sequences: 62578
Number of extensions: 308544
Number of successful extensions: 686
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 43
length of query: 239
length of database: 14,973,337
effective HSP length: 96
effective length of query: 143
effective length of database: 8,965,849
effective search space: 1282116407
effective search space used: 1282116407
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)