Query 026377
Match_columns 239
No_of_seqs 218 out of 1975
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 07:14:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026377.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026377hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.3E-63 2.7E-68 414.2 20.7 223 13-235 2-224 (303)
2 KOG0373 Serine/threonine speci 100.0 4.1E-58 8.9E-63 376.3 17.8 224 11-234 3-226 (306)
3 cd07420 MPP_RdgC Drosophila me 100.0 4.2E-54 9.1E-59 380.1 23.5 227 9-236 2-263 (321)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 5.9E-54 1.3E-58 375.0 22.3 224 14-237 2-225 (285)
5 PTZ00239 serine/threonine prot 100.0 8.2E-54 1.8E-58 376.4 23.0 224 13-236 2-225 (303)
6 KOG0371 Serine/threonine prote 100.0 5.9E-54 1.3E-58 358.6 15.9 234 1-234 7-240 (319)
7 PTZ00480 serine/threonine-prot 100.0 1.7E-52 3.6E-57 369.4 22.2 225 11-236 8-241 (320)
8 cd07416 MPP_PP2B PP2B, metallo 100.0 3.6E-52 7.8E-57 367.1 23.7 225 12-237 1-233 (305)
9 PTZ00244 serine/threonine-prot 100.0 8.9E-52 1.9E-56 362.3 21.4 223 13-236 3-234 (294)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.6E-51 3.4E-56 364.1 21.9 228 9-237 11-244 (316)
11 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.1E-51 2.5E-56 361.9 20.5 223 14-237 2-233 (293)
12 KOG0374 Serine/threonine speci 100.0 1.6E-51 3.5E-56 364.4 18.5 213 26-238 31-245 (331)
13 smart00156 PP2Ac Protein phosp 100.0 1.6E-50 3.6E-55 351.7 20.9 210 27-237 1-211 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 9.8E-50 2.1E-54 357.4 23.6 227 10-236 8-283 (377)
15 KOG0375 Serine-threonine phosp 100.0 1.6E-48 3.6E-53 338.7 16.3 226 9-235 43-276 (517)
16 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.5E-47 3.2E-52 338.9 21.2 212 25-236 19-252 (311)
17 KOG0377 Protein serine/threoni 100.0 2.8E-40 6.1E-45 293.3 12.1 228 8-236 115-372 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.2E-32 2.7E-37 248.6 10.3 224 10-234 166-395 (476)
19 PRK13625 bis(5'-nucleosyl)-tet 100.0 9.9E-30 2.1E-34 218.6 13.3 170 54-231 1-197 (245)
20 cd00144 MPP_PPP_family phospho 100.0 1.1E-28 2.4E-33 208.3 16.5 170 57-233 1-195 (225)
21 TIGR00668 apaH bis(5'-nucleosy 100.0 2.8E-28 6E-33 211.1 10.4 164 54-221 1-171 (279)
22 PRK00166 apaH diadenosine tetr 100.0 4.2E-28 9.2E-33 211.2 11.4 125 54-182 1-131 (275)
23 cd07422 MPP_ApaH Escherichia c 99.9 1.1E-27 2.4E-32 206.6 11.5 130 56-189 1-136 (257)
24 PHA02239 putative protein phos 99.9 2.1E-27 4.6E-32 202.7 13.0 156 54-230 1-202 (235)
25 cd07423 MPP_PrpE Bacillus subt 99.9 1.9E-27 4.1E-32 203.1 12.3 123 54-178 1-143 (234)
26 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.2E-27 6.8E-32 205.0 13.0 164 55-227 3-263 (304)
27 cd07413 MPP_PA3087 Pseudomonas 99.9 4.7E-27 1E-31 199.2 12.8 116 57-175 2-143 (222)
28 PRK11439 pphA serine/threonine 99.9 2.3E-26 5E-31 194.5 12.3 161 53-231 16-192 (218)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 5.5E-25 1.2E-29 184.5 13.4 165 54-230 1-180 (207)
30 PRK09968 serine/threonine-spec 99.9 3.2E-23 6.8E-28 175.3 11.0 160 53-230 14-191 (218)
31 cd07425 MPP_Shelphs Shewanella 99.9 1.3E-22 2.7E-27 170.5 9.3 121 57-178 1-141 (208)
32 PF00149 Metallophos: Calcineu 99.3 1.6E-11 3.4E-16 95.8 8.0 76 54-129 1-82 (200)
33 PRK09453 phosphodiesterase; Pr 99.2 1.2E-11 2.5E-16 101.6 6.1 69 54-126 1-77 (182)
34 cd00841 MPP_YfcE Escherichia c 99.2 1.4E-10 3.1E-15 92.3 8.3 86 55-178 1-89 (155)
35 TIGR00040 yfcE phosphoesterase 99.1 1.2E-10 2.5E-15 93.4 5.8 63 54-125 1-64 (158)
36 cd07397 MPP_DevT Myxococcus xa 99.1 7E-10 1.5E-14 94.7 9.0 114 55-177 2-160 (238)
37 PF12850 Metallophos_2: Calcin 99.0 2.6E-10 5.7E-15 90.1 4.7 62 54-127 1-62 (156)
38 cd07388 MPP_Tt1561 Thermus the 98.9 1.7E-09 3.7E-14 91.8 6.6 71 54-125 5-75 (224)
39 cd07379 MPP_239FB Homo sapiens 98.8 1.1E-08 2.4E-13 79.7 5.4 61 55-125 1-63 (135)
40 cd07392 MPP_PAE1087 Pyrobaculu 98.7 2.2E-08 4.8E-13 81.4 5.9 66 56-127 1-67 (188)
41 cd00838 MPP_superfamily metall 98.6 1.5E-07 3.2E-12 70.9 7.5 67 57-123 1-69 (131)
42 cd07385 MPP_YkuE_C Bacillus su 98.6 6.9E-08 1.5E-12 81.0 5.4 71 54-126 2-77 (223)
43 PRK11340 phosphodiesterase Yae 98.6 9.2E-08 2E-12 83.5 6.3 71 53-125 49-125 (271)
44 cd07394 MPP_Vps29 Homo sapiens 98.5 2.8E-07 6E-12 75.6 7.9 62 55-125 1-65 (178)
45 cd07404 MPP_MS158 Microscilla 98.5 7.9E-08 1.7E-12 77.4 3.0 67 56-125 1-68 (166)
46 PRK05340 UDP-2,3-diacylglucosa 98.4 3.7E-07 8E-12 78.2 5.6 71 54-126 1-84 (241)
47 TIGR03729 acc_ester putative p 98.4 5.9E-07 1.3E-11 76.7 5.6 68 55-125 1-74 (239)
48 TIGR00619 sbcd exonuclease Sbc 98.2 2.5E-06 5.4E-11 73.8 6.5 72 54-125 1-88 (253)
49 PRK04036 DNA polymerase II sma 98.2 4.1E-06 8.8E-11 79.3 7.7 116 52-174 242-388 (504)
50 cd07396 MPP_Nbla03831 Homo sap 98.2 4.2E-06 9E-11 72.8 6.8 72 55-126 2-87 (267)
51 PHA02546 47 endonuclease subun 98.1 4.5E-06 9.7E-11 75.2 6.1 72 54-125 1-89 (340)
52 TIGR01854 lipid_A_lpxH UDP-2,3 98.1 5.4E-06 1.2E-10 70.6 5.0 68 56-125 1-81 (231)
53 cd07403 MPP_TTHA0053 Thermus t 98.0 7.6E-06 1.6E-10 63.5 5.1 57 57-124 1-57 (129)
54 cd07402 MPP_GpdQ Enterobacter 98.0 1.3E-05 2.8E-10 68.0 6.9 67 55-125 1-83 (240)
55 cd00840 MPP_Mre11_N Mre11 nucl 98.0 1E-05 2.2E-10 67.5 5.5 72 55-127 1-91 (223)
56 cd07390 MPP_AQ1575 Aquifex aeo 98.0 1.1E-05 2.4E-10 65.3 5.3 67 56-127 1-84 (168)
57 cd07400 MPP_YydB Bacillus subt 98.0 1.4E-05 2.9E-10 62.6 5.5 68 56-124 1-80 (144)
58 cd07391 MPP_PF1019 Pyrococcus 98.0 2.3E-05 4.9E-10 63.7 6.8 58 68-126 29-89 (172)
59 PRK11148 cyclic 3',5'-adenosin 98.0 1.7E-05 3.7E-10 69.2 6.3 72 52-125 13-98 (275)
60 TIGR00024 SbcD_rel_arch putati 97.9 3.1E-05 6.7E-10 65.9 6.6 69 54-126 15-103 (225)
61 COG0622 Predicted phosphoester 97.9 2.7E-05 5.8E-10 63.6 5.5 65 53-125 1-65 (172)
62 cd07399 MPP_YvnB Bacillus subt 97.8 3.1E-05 6.6E-10 65.2 5.7 68 55-124 2-81 (214)
63 cd07383 MPP_Dcr2 Saccharomyces 97.8 5.1E-05 1.1E-09 62.9 6.7 70 54-123 3-87 (199)
64 cd08165 MPP_MPPE1 human MPPE1 97.8 2.6E-05 5.6E-10 62.6 4.7 50 77-126 35-90 (156)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.8 4.4E-05 9.5E-10 66.4 6.5 69 56-125 1-86 (262)
66 COG0639 ApaH Diadenosine tetra 97.8 2.2E-05 4.8E-10 60.5 3.7 105 128-233 4-117 (155)
67 TIGR00583 mre11 DNA repair pro 97.8 5.9E-05 1.3E-09 69.5 6.9 54 53-106 3-68 (405)
68 cd07393 MPP_DR1119 Deinococcus 97.8 4.4E-05 9.4E-10 65.1 5.3 65 56-124 1-83 (232)
69 COG1409 Icc Predicted phosphoh 97.7 9.7E-05 2.1E-09 63.9 7.3 73 54-128 1-81 (301)
70 PRK10966 exonuclease subunit S 97.7 6.2E-05 1.4E-09 69.5 5.7 71 54-125 1-87 (407)
71 COG1408 Predicted phosphohydro 97.6 8.1E-05 1.7E-09 65.5 5.4 72 53-126 44-119 (284)
72 cd07386 MPP_DNA_pol_II_small_a 97.6 8.1E-05 1.8E-09 63.7 4.8 68 57-126 2-95 (243)
73 cd07398 MPP_YbbF-LpxH Escheric 97.6 0.0001 2.3E-09 61.4 5.3 69 57-126 1-83 (217)
74 cd07395 MPP_CSTP1 Homo sapiens 97.6 0.00014 2.9E-09 62.8 6.1 70 54-125 5-99 (262)
75 cd00839 MPP_PAPs purple acid p 97.6 6.4E-05 1.4E-09 65.8 3.8 70 53-126 4-82 (294)
76 cd07401 MPP_TMEM62_N Homo sapi 97.6 0.00016 3.4E-09 62.6 6.1 70 56-125 2-89 (256)
77 COG2129 Predicted phosphoester 97.6 0.00015 3.3E-09 61.0 5.7 71 53-127 3-79 (226)
78 COG2908 Uncharacterized protei 97.3 0.00079 1.7E-08 57.2 7.5 67 57-125 1-80 (237)
79 COG4186 Predicted phosphoester 97.3 0.00067 1.5E-08 54.1 5.6 67 55-125 5-86 (186)
80 cd00845 MPP_UshA_N_like Escher 97.2 0.00059 1.3E-08 58.4 5.0 66 55-125 2-82 (252)
81 cd08166 MPP_Cdc1_like_1 unchar 97.2 0.00061 1.3E-08 56.6 4.8 49 77-125 39-93 (195)
82 cd07384 MPP_Cdc1_like Saccharo 97.2 0.00074 1.6E-08 54.9 5.2 52 75-126 40-101 (171)
83 PF14582 Metallophos_3: Metall 97.0 0.00053 1.2E-08 58.0 2.8 72 54-126 6-103 (255)
84 cd07380 MPP_CWF19_N Schizosacc 97.0 0.0016 3.5E-08 51.9 5.4 66 57-123 1-68 (150)
85 COG0420 SbcD DNA repair exonuc 97.0 0.0019 4.1E-08 59.1 6.6 73 54-126 1-89 (390)
86 PLN02533 probable purple acid 96.8 0.0015 3.3E-08 60.7 4.3 70 53-125 139-211 (427)
87 cd07410 MPP_CpdB_N Escherichia 96.7 0.0017 3.8E-08 56.5 4.3 66 55-125 2-95 (277)
88 PF08321 PPP5: PPP5 TPR repeat 96.3 0.0066 1.4E-07 44.6 4.5 45 8-52 51-95 (95)
89 KOG0376 Serine-threonine phosp 96.3 0.0017 3.6E-08 60.2 1.4 115 26-141 14-132 (476)
90 cd08164 MPP_Ted1 Saccharomyces 96.3 0.0092 2E-07 49.6 5.4 66 60-125 23-111 (193)
91 cd07378 MPP_ACP5 Homo sapiens 96.2 0.0095 2.1E-07 51.6 5.7 69 55-125 2-83 (277)
92 cd08163 MPP_Cdc1 Saccharomyces 96.1 0.0038 8.3E-08 54.1 2.5 46 79-124 44-96 (257)
93 cd07408 MPP_SA0022_N Staphyloc 96.0 0.01 2.2E-07 51.2 5.0 66 55-125 2-82 (257)
94 COG1407 Predicted ICC-like pho 95.9 0.019 4E-07 49.1 5.8 72 53-127 19-112 (235)
95 COG1768 Predicted phosphohydro 95.9 0.013 2.9E-07 47.9 4.5 44 79-126 42-87 (230)
96 cd07412 MPP_YhcR_N Bacillus su 95.5 0.018 4E-07 50.6 4.6 65 55-124 2-87 (288)
97 cd07411 MPP_SoxB_N Thermus the 95.2 0.026 5.6E-07 48.9 4.4 65 55-125 2-95 (264)
98 cd07409 MPP_CD73_N CD73 ecto-5 94.7 0.06 1.3E-06 47.2 5.4 66 55-125 2-94 (281)
99 PRK09419 bifunctional 2',3'-cy 94.6 0.041 8.9E-07 57.4 4.5 66 54-124 661-735 (1163)
100 cd07406 MPP_CG11883_N Drosophi 94.5 0.063 1.4E-06 46.4 4.9 65 55-124 2-82 (257)
101 TIGR00282 metallophosphoestera 94.4 0.069 1.5E-06 46.6 5.0 66 54-124 1-70 (266)
102 cd00842 MPP_ASMase acid sphing 94.4 0.058 1.3E-06 47.3 4.6 73 55-127 39-124 (296)
103 PF06874 FBPase_2: Firmicute f 94.1 0.043 9.4E-07 52.7 3.3 41 81-126 185-225 (640)
104 KOG2863 RNA lariat debranching 94.1 0.14 3E-06 46.2 6.2 73 54-126 1-89 (456)
105 KOG1432 Predicted DNA repair e 93.3 0.16 3.4E-06 45.6 5.1 71 54-125 54-147 (379)
106 cd07405 MPP_UshA_N Escherichia 93.3 0.092 2E-06 46.1 3.7 66 55-125 2-87 (285)
107 KOG3662 Cell division control 92.3 0.26 5.6E-06 45.4 5.2 72 53-124 48-143 (410)
108 cd08162 MPP_PhoA_N Synechococc 92.3 0.2 4.4E-06 44.7 4.5 65 55-124 2-90 (313)
109 COG0737 UshA 5'-nucleotidase/2 92.1 0.17 3.8E-06 48.1 4.1 70 52-126 25-116 (517)
110 cd07382 MPP_DR1281 Deinococcus 91.9 0.34 7.5E-06 42.0 5.4 65 55-124 1-69 (255)
111 cd07407 MPP_YHR202W_N Saccharo 91.0 0.25 5.5E-06 43.4 3.7 67 54-125 6-97 (282)
112 PF04042 DNA_pol_E_B: DNA poly 90.8 0.3 6.5E-06 40.5 3.8 72 56-127 1-93 (209)
113 PRK09420 cpdB bifunctional 2', 90.3 0.36 7.8E-06 47.4 4.3 70 51-125 23-122 (649)
114 TIGR01390 CycNucDiestase 2',3' 90.3 0.33 7.1E-06 47.5 4.1 66 54-124 3-98 (626)
115 PRK09419 bifunctional 2',3'-cy 89.8 0.36 7.7E-06 50.5 4.1 67 53-124 41-138 (1163)
116 KOG1378 Purple acid phosphatas 88.2 0.53 1.1E-05 43.9 3.6 73 52-127 146-223 (452)
117 TIGR01530 nadN NAD pyrophospha 87.4 0.99 2.2E-05 43.4 5.1 66 55-125 2-94 (550)
118 PRK11907 bifunctional 2',3'-cy 87.0 0.82 1.8E-05 46.0 4.4 68 53-125 115-213 (814)
119 KOG2476 Uncharacterized conser 85.9 1.8 3.9E-05 40.4 5.6 69 53-122 5-75 (528)
120 COG3855 Fbp Uncharacterized pr 85.8 0.53 1.2E-05 43.9 2.2 39 82-125 192-230 (648)
121 PTZ00422 glideosome-associated 85.7 1.2 2.5E-05 41.1 4.4 72 51-124 24-108 (394)
122 KOG3339 Predicted glycosyltran 85.6 9.5 0.0002 31.6 9.1 85 82-172 40-140 (211)
123 PTZ00235 DNA polymerase epsilo 84.7 2.3 5E-05 37.5 5.6 73 53-125 27-122 (291)
124 KOG3325 Membrane coat complex 84.6 1.3 2.8E-05 35.3 3.6 62 55-125 2-66 (183)
125 cd07387 MPP_PolD2_C PolD2 (DNA 82.5 2.9 6.3E-05 36.3 5.3 70 56-127 2-109 (257)
126 PRK09418 bifunctional 2',3'-cy 82.4 1.6 3.5E-05 43.8 4.1 68 52-124 38-141 (780)
127 KOG2310 DNA repair exonuclease 81.3 3.7 7.9E-05 39.3 5.8 54 53-106 13-78 (646)
128 PRK09558 ushA bifunctional UDP 81.0 1.6 3.5E-05 41.9 3.5 68 53-125 34-121 (551)
129 COG1311 HYS2 Archaeal DNA poly 76.4 8.1 0.00017 36.4 6.4 73 55-127 227-323 (481)
130 KOG3947 Phosphoesterases [Gene 75.1 3 6.5E-05 36.5 3.1 66 53-126 61-127 (305)
131 KOG2679 Purple (tartrate-resis 73.3 2.6 5.6E-05 37.0 2.3 69 53-125 43-126 (336)
132 PF06874 FBPase_2: Firmicute f 68.1 4.8 0.0001 39.1 3.0 25 52-76 31-55 (640)
133 PF02875 Mur_ligase_C: Mur lig 46.0 22 0.00048 25.0 2.8 69 54-122 12-82 (91)
134 PF13258 DUF4049: Domain of un 43.1 26 0.00057 30.2 3.1 88 81-176 85-186 (318)
135 COG3855 Fbp Uncharacterized pr 43.1 12 0.00026 35.3 1.1 24 53-76 37-60 (648)
136 COG1692 Calcineurin-like phosp 43.0 59 0.0013 28.2 5.2 66 54-124 1-70 (266)
137 PF12641 Flavodoxin_3: Flavodo 41.2 1.2E+02 0.0027 24.1 6.6 52 57-108 2-66 (160)
138 PRK10773 murF UDP-N-acetylmura 39.3 76 0.0016 29.6 5.9 66 54-120 325-392 (453)
139 KOG3770 Acid sphingomyelinase 37.5 64 0.0014 31.3 5.1 61 68-128 196-266 (577)
140 COG0634 Hpt Hypoxanthine-guani 37.5 2.1E+02 0.0046 23.4 7.4 77 26-106 11-118 (178)
141 cd07382 MPP_DR1281 Deinococcus 37.4 31 0.00067 29.9 2.8 40 83-125 1-40 (255)
142 cd01533 4RHOD_Repeat_2 Member 37.1 1.2E+02 0.0026 21.8 5.6 90 22-121 7-101 (109)
143 KOG3425 Uncharacterized conser 34.4 1.1E+02 0.0024 23.5 5.0 60 66-125 12-79 (128)
144 TIGR01143 murF UDP-N-acetylmur 33.9 1.2E+02 0.0026 27.8 6.3 71 53-123 295-366 (417)
145 TIGR00282 metallophosphoestera 33.5 25 0.00054 30.7 1.6 39 83-125 2-41 (266)
146 COG1692 Calcineurin-like phosp 32.2 50 0.0011 28.6 3.1 38 83-121 2-39 (266)
147 PRK05564 DNA polymerase III su 28.9 1.5E+02 0.0032 26.0 5.8 57 25-87 71-128 (313)
148 KOG3040 Predicted sugar phosph 24.4 3.5E+02 0.0077 23.1 6.7 41 7-47 46-87 (262)
149 PRK00485 fumC fumarate hydrata 24.4 5.6E+02 0.012 24.1 9.0 88 21-108 59-151 (464)
150 TIGR00550 nadA quinolinate syn 24.3 96 0.0021 27.7 3.7 36 53-91 28-63 (310)
151 PF06180 CbiK: Cobalt chelatas 24.1 98 0.0021 26.9 3.6 7 118-124 208-214 (262)
152 PRK04531 acetylglutamate kinas 24.0 95 0.0021 28.7 3.7 36 65-118 6-41 (398)
153 PF06490 FleQ: Flagellar regul 23.9 1.3E+02 0.0027 22.3 3.8 64 55-125 1-81 (109)
154 PF09949 DUF2183: Uncharacteri 23.2 2.4E+02 0.0052 20.6 5.1 41 72-118 55-95 (100)
155 COG3792 Uncharacterized protei 22.5 27 0.00059 26.7 -0.2 32 56-94 23-60 (122)
156 PF14164 YqzH: YqzH-like prote 21.9 2.4E+02 0.0052 19.1 4.3 27 23-49 22-48 (64)
157 COG0148 Eno Enolase [Carbohydr 21.9 4.4E+02 0.0096 24.6 7.4 96 27-124 169-288 (423)
158 COG4320 Uncharacterized protei 21.7 63 0.0014 29.2 1.9 57 44-108 47-107 (410)
159 TIGR00024 SbcD_rel_arch putati 21.7 2.7E+02 0.0059 23.4 5.8 60 23-90 34-99 (225)
160 PF04839 PSRP-3_Ycf65: Plastid 20.1 2.5E+02 0.0055 17.9 4.6 31 14-44 13-43 (49)
161 COG0770 MurF UDP-N-acetylmuram 20.0 4.1E+02 0.0089 25.0 7.1 94 27-121 300-395 (451)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-63 Score=414.18 Aligned_cols=223 Identities=69% Similarity=1.270 Sum_probs=219.5
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceecccccc
Q 026377 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (239)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 92 (239)
++++.++.+.+++.+++.++..||.++.+++..|+++..++.|++|+|||||++.+|..+++..|.++.+.|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEcC
Q 026377 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (239)
Q Consensus 93 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHg 172 (239)
||.+|+|++.+|+.+|.+||+++++||||||.+.++..|||++||.+|||+..+|+.+.+.|+.||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHH
Q 026377 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLPF 235 (239)
Q Consensus 173 Gi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~~ 235 (239)
|++|++.+++||+.+.|.+++|.++.++|+|||||++..+|..+|||+|+.||.+++++|++.
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~ 224 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEA 224 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999974
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-58 Score=376.27 Aligned_cols=224 Identities=63% Similarity=1.179 Sum_probs=219.4
Q ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceecccc
Q 026377 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90 (239)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~ 90 (239)
+.+.+.+|+..++++.+|++++..||+-+++++..|+++.+++.|+.|+|||||++.+|..+++..|..|+..|||+|||
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEE
Q 026377 91 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCL 170 (239)
Q Consensus 91 vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~v 170 (239)
||||..|+|+..+|+.||.+||.++.++|||||.+.+...|||++||..+||+...|+.+.+.|+.|+++++|+++++||
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHH
Q 026377 171 HGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLP 234 (239)
Q Consensus 171 HgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~ 234 (239)
|||++|++..++||+.+.|-+++|.++.++|++||||++.+.|..++||+|++||++++++|.-
T Consensus 163 HGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~ 226 (306)
T KOG0373|consen 163 HGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNH 226 (306)
T ss_pred cCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999963
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4.2e-54 Score=380.07 Aligned_cols=227 Identities=33% Similarity=0.604 Sum_probs=204.7
Q ss_pred CChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----ceeeecCCCCCHHHHHHHHHhcCCCC-CCc
Q 026377 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCP-DTN 83 (239)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~----~i~viGDIHG~~~~L~~ll~~~~~~~-~~~ 83 (239)
-|+.+++++++.+.+++.++++++.+||++|++++++||+++++.. |++||||||||+.+|.++++..+.++ .++
T Consensus 2 ~~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~ 81 (321)
T cd07420 2 LTKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP 81 (321)
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccce
Confidence 4778899999999999999999999999999999999999999865 89999999999999999999999875 467
Q ss_pred ceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCC--hhHHHHHHHHHhhcCceE
Q 026377 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTA 161 (239)
Q Consensus 84 ~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~LP~~~ 161 (239)
+||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..+||..|+..+|+. ..+|+.+.++|+.||+++
T Consensus 82 ~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaa 161 (321)
T cd07420 82 YVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLAT 161 (321)
T ss_pred EEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceE
Confidence 999999999999999999999999999999999999999999999999999999999984 679999999999999999
Q ss_pred EEcCcEEEEcCCCCCCCCcHHhhhhccCccc-----CCC-----------C-----------CCccccccCCCCCCCC-C
Q 026377 162 LVESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH-----------E-----------GPMCDLLWSDPDDRCG-W 213 (239)
Q Consensus 162 ~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~-----~~~-----------~-----------~~~~~llWsdp~~~~~-~ 213 (239)
+++++++|||||++| ..++++++.+.|+.. .|. . ..+.|+|||||....+ |
T Consensus 162 ii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~ 240 (321)
T cd07420 162 IIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCK 240 (321)
T ss_pred EEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCC
Confidence 999999999999987 457889988877421 111 0 2467999999997555 7
Q ss_pred CcCCCCCceeeCHHHHHHHHHHh
Q 026377 214 GISPRGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 214 ~~~~rg~g~~fG~~~~~~fl~~~ 236 (239)
.+++||.|++||++++++||++-
T Consensus 241 ~~~~RG~g~~FG~~~~~~Fl~~n 263 (321)
T cd07420 241 PNTFRGGGCYFGPDVTSKVLQKH 263 (321)
T ss_pred ccCCCCCccccCHHHHHHHHHHC
Confidence 77799999999999999999874
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=5.9e-54 Score=375.05 Aligned_cols=224 Identities=75% Similarity=1.290 Sum_probs=215.6
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccC
Q 026377 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDR 93 (239)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDr 93 (239)
++.+++++.++..++++++.+||++|++++++||++++++.+++||||||||+.+|.++++..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEcCC
Q 026377 94 GYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGG 173 (239)
Q Consensus 94 G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgG 173 (239)
|++|+|++.+++.++..+|.+++++|||||.+.++..+||..|+..+|+...+|..+.++|.+||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHhh
Q 026377 174 LSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLPFVI 237 (239)
Q Consensus 174 i~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~ 237 (239)
++|...++++++.++|+.+.+.++.+.|++||||....+|.+++||.|++||++++++||++-+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~ 225 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNG 225 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCC
Confidence 9999999999999999999998899999999999988899999999999999999999999753
No 5
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=8.2e-54 Score=376.36 Aligned_cols=224 Identities=58% Similarity=1.118 Sum_probs=215.4
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceecccccc
Q 026377 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (239)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 92 (239)
+++.+++.+.+++.++++++.+||++|++++++||++++++.+++|+||||||+.+|.++++..+..+.+++||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 37889999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEcC
Q 026377 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (239)
Q Consensus 93 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHg 172 (239)
||++|+|++.+++.+|..+|.+++++|||||.+.++..+||..|+..+|+...+|+.+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHh
Q 026377 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 173 Gi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~~~ 236 (239)
|++|...++++++.+.|+.+.|.++.+.|++||||....+|.+++||.|++||++++++||+.-
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n 225 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLN 225 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHC
Confidence 9999999999999999999999999999999999998889999999999999999999999874
No 6
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-54 Score=358.60 Aligned_cols=234 Identities=78% Similarity=1.332 Sum_probs=229.0
Q ss_pred CCCCCCCCCChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCC
Q 026377 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP 80 (239)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~ 80 (239)
|.+++.++.....++.+|+.+..++++++.++..+|+.|+++|.++.++.+++.+++|+||+|||+++|..+++.-|..+
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~p 86 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAP 86 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCce
Q 026377 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 160 (239)
Q Consensus 81 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~ 160 (239)
+..++|+|||||||++|.|++.++..+|.+||++|.+||||||.+.+...|||+.||+++||...+|..+.+.|+.+|+.
T Consensus 87 dtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~t 166 (319)
T KOG0371|consen 87 DTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 166 (319)
T ss_pred CcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHH
Q 026377 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLP 234 (239)
Q Consensus 161 ~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~ 234 (239)
+.++++++|.|||++|++.++++++.++|.+++|.+++++|+|||||.++.+|..++||.|+.||.+..++|-.
T Consensus 167 ali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~ 240 (319)
T KOG0371|consen 167 ALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH 240 (319)
T ss_pred hhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999854
No 7
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.7e-52 Score=369.45 Aligned_cols=225 Identities=47% Similarity=0.969 Sum_probs=213.0
Q ss_pred hhhHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCC
Q 026377 11 TTDLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDT 82 (239)
Q Consensus 11 ~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 82 (239)
+..++++++.+.+.. .++++++.+||++|++++++||+++++..+++||||||||+.+|.++++..++++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 345888999988654 589999999999999999999999999999999999999999999999999999999
Q ss_pred cceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEE
Q 026377 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL 162 (239)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~ 162 (239)
++||||||||||++++|++.+++.++..+|.++++||||||.+.++..+||..++..+|+ ..+|..+.+.|..||++++
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAi 166 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAAL 166 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhhe
Confidence 999999999999999999999999999999999999999999999999999999999995 6799999999999999999
Q ss_pred EcCcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHh
Q 026377 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 163 i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~ 236 (239)
++++++|||||++|...++++++.+.|+.+.+.++.+.++|||||.. ..+|.+++||.|++||++++++||+.-
T Consensus 167 I~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n 241 (320)
T PTZ00480 167 IDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKH 241 (320)
T ss_pred ecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhC
Confidence 99999999999999999999999999999999889999999999986 678999999999999999999999874
No 8
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.6e-52 Score=367.15 Aligned_cols=225 Identities=44% Similarity=0.827 Sum_probs=211.2
Q ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccc
Q 026377 12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV 91 (239)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v 91 (239)
++++.+++++.+++.++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..+.++.+++|||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyV 80 (305)
T cd07416 1 PRIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYV 80 (305)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCcc
Confidence 35788999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEc
Q 026377 92 DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLH 171 (239)
Q Consensus 92 DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vH 171 (239)
|||++|+||+.+++.+|..+|.+++++|||||.+.++..++|..++..+|+ ..+|..+.++|++||++++++++++|||
T Consensus 81 DRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vH 159 (305)
T cd07416 81 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVH 159 (305)
T ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEc
Confidence 999999999999999999999999999999999999999999999999994 6788999999999999999999999999
Q ss_pred CCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCC-------CCCcC-CCCCceeeCHHHHHHHHHHhh
Q 026377 172 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQVLYSEFLPFVI 237 (239)
Q Consensus 172 gGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~-------~~~~~-~rg~g~~fG~~~~~~fl~~~~ 237 (239)
||++|...++++++.+.|+.+.+..+.+.|++||||.... +|.++ +||.|++||++++++||++-+
T Consensus 160 GGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~ 233 (305)
T cd07416 160 GGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNN 233 (305)
T ss_pred CCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcC
Confidence 9999999999999999999988888899999999997522 47665 899999999999999998743
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=8.9e-52 Score=362.33 Aligned_cols=223 Identities=40% Similarity=0.841 Sum_probs=208.4
Q ss_pred hHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcc
Q 026377 13 DLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNY 84 (239)
Q Consensus 13 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~ 84 (239)
-++++|.++.+.. .++++++.+||+++++++++||+++++..+++||||||||+.+|.++++..+.++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 3456666665543 58899999999999999999999999999999999999999999999999999988999
Q ss_pred eeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEc
Q 026377 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 164 (239)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~ 164 (239)
||||||||||++|.||+.+++.+|..+|.+++++|||||.+.++..+||..++..+|+ ..+|+.+.++|+.||++++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEec
Confidence 9999999999999999999999999999999999999999999999999999999996 678999999999999999999
Q ss_pred CcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHh
Q 026377 165 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 165 ~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~ 236 (239)
++++|||||++|.+.++++++.+.|+.+.+.++.+.|++||||.. ..+|.+++||.|++||++++++||+.-
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n 234 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMV 234 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHc
Confidence 999999999999999999999999999888888899999999987 679999999999999999999999874
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.6e-51 Score=364.09 Aligned_cols=228 Identities=37% Similarity=0.701 Sum_probs=212.1
Q ss_pred CChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCc----eeeecCCCCCHHHHHHHHHhcCCCCC-Cc
Q 026377 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSP----VTICGDIHGQFHDLAELFQIGGKCPD-TN 83 (239)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~----i~viGDIHG~~~~L~~ll~~~~~~~~-~~ 83 (239)
-|...++++++.++++..++++++.+||++|+++++++|+++++..+ ++||||||||+.+|.++|+..++++. ++
T Consensus 11 i~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ 90 (316)
T cd07417 11 VTLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP 90 (316)
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCe
Confidence 36788999999999999999999999999999999999999988754 99999999999999999999998754 56
Q ss_pred ceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEE
Q 026377 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV 163 (239)
Q Consensus 84 ~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i 163 (239)
+||||||||||++|+||+.+++.+|..+|.++++||||||.+.++..++|..++..+|+ ..+|+.+.++|.+||+++++
T Consensus 91 ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii 169 (316)
T cd07417 91 YLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLI 169 (316)
T ss_pred EEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhhee
Confidence 99999999999999999999999999999999999999999999999999999999995 57889999999999999999
Q ss_pred cCcEEEEcCCC-CCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHhh
Q 026377 164 ESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLPFVI 237 (239)
Q Consensus 164 ~~~~l~vHgGi-~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~ 237 (239)
+++++|||||+ ++...++++++.+.|+.+.+.++.+.++|||||....+|.+++||.|++||.+++++||++-+
T Consensus 170 ~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~ 244 (316)
T cd07417 170 NGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENN 244 (316)
T ss_pred CCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcC
Confidence 99999999999 456788999999999988888888999999999988899999999999999999999998753
No 11
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.1e-51 Score=361.91 Aligned_cols=223 Identities=47% Similarity=0.999 Sum_probs=209.5
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcce
Q 026377 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (239)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 85 (239)
++++++.+.+.. .++++++.+||++|++++++||++++++.+++||||||||+.+|.++++..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 466777776554 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcC
Q 026377 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES 165 (239)
Q Consensus 86 fLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~ 165 (239)
|||||||||++|+|++.+++.+|..+|.+++++|||||.+.++..+||..++..+|+ ..+|..+.++|.+||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHhh
Q 026377 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVLYSEFLPFVI 237 (239)
Q Consensus 166 ~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~ 237 (239)
+++|||||++|...++++++.+.|+.+.+..+.+.+++||||.. ..+|.+++||.|++||.+++++||+.-+
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~ 233 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHD 233 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcC
Confidence 99999999999999999999999999888888999999999986 6789999999999999999999998743
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.6e-51 Score=364.37 Aligned_cols=213 Identities=49% Similarity=1.001 Sum_probs=206.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcC-CCCCCcceeccccccCCCCcHHHHHHH
Q 026377 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLL 104 (239)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 104 (239)
.++++++.++|..+.+++..+|++++++.||.|+|||||++.+|.+++...+ +++..+|||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4889999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEcCCCCCCCCcHHhh
Q 026377 105 VALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184 (239)
Q Consensus 105 ~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i 184 (239)
+++|++||++++++|||||.+.++..|||++||..+|+...+|..+...|+.||++++++++++|+|||++|...+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997668999999999999999999999999999999999999999
Q ss_pred hhccCcccCCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHhhc
Q 026377 185 RNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVLYSEFLPFVIQ 238 (239)
Q Consensus 185 ~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~~ 238 (239)
+.+.|+.+.+..+.+.|++||||+. ..+|.+|.||.++.||++++++||++...
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~l 245 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDL 245 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCc
Confidence 9999999999999999999999998 69999999999999999999999998653
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.6e-50 Score=351.69 Aligned_cols=210 Identities=53% Similarity=0.981 Sum_probs=200.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHH
Q 026377 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (239)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (239)
++++++.+||++|++++++||+++++++|++||||||||+.+|.++++..+.++.+++||||||||||++|+|++.+++.
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEEEcCCCCCCCCcHHhhhh
Q 026377 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRN 186 (239)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~ 186 (239)
++..+|.+++++|||||.+.++..+||..++..+|+ ..+|+.+.++|+.||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999996 6899999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHhh
Q 026377 187 FDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVLYSEFLPFVI 237 (239)
Q Consensus 187 ~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~ 237 (239)
+.|+.+.+.++.+.+++||||.. ..+|.+++||.|++||++++++||++-+
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~ 211 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNN 211 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCC
Confidence 99998888888999999999964 7889999999999999999999998753
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=9.8e-50 Score=357.42 Aligned_cols=227 Identities=36% Similarity=0.585 Sum_probs=203.8
Q ss_pred ChhhHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CceeeecCCCCCHHHHHHHHHh
Q 026377 10 TTTDLDEQISQLMQC----------KPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQI 75 (239)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~ 75 (239)
|.+.++.||+.++.. ..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 667889999999766 34789999999999999999999999987 7999999999999999999999
Q ss_pred cCCCCC-CcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCC--hhHHHHHHH
Q 026377 76 GGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTD 152 (239)
Q Consensus 76 ~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~ 152 (239)
.+.++. +.+||||||||||++|+||+.+++.++..+|.++++||||||.+.++..+||..++..+|+. ..+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 998765 45999999999999999999999999999999999999999999999999999999999975 368999999
Q ss_pred HHhhcCceEEEcCcEEEEcCCCC---------------------------CCCCcHHhhhhccCc-ccCCCCCC---ccc
Q 026377 153 LFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRV-QEVPHEGP---MCD 201 (239)
Q Consensus 153 ~~~~LP~~~~i~~~~l~vHgGi~---------------------------~~~~~~~~i~~~~r~-~~~~~~~~---~~~ 201 (239)
+|++||++++++++++|||||++ |...++++++.++|+ .+.+.++. +.|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999999999999994 345678889988886 35555443 679
Q ss_pred cccCCCCCCCCCCcC-CCCCceeeCHHHHHHHHHHh
Q 026377 202 LLWSDPDDRCGWGIS-PRGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 202 llWsdp~~~~~~~~~-~rg~g~~fG~~~~~~fl~~~ 236 (239)
+|||||....+|.++ .||.|++||.+++++||++-
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n 283 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKN 283 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHc
Confidence 999999987888776 79999999999999999874
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=338.65 Aligned_cols=226 Identities=43% Similarity=0.820 Sum_probs=212.5
Q ss_pred CChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCCCcceecc
Q 026377 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMG 88 (239)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLG 88 (239)
..+++.+-+-++|...+.++++..+.|+.++..++++|++++++..||.|+|||||++.+|.++++..|.+..++|+|||
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLG 122 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLG 122 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeec
Confidence 34566677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcCcEE
Q 026377 89 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 168 (239)
Q Consensus 89 D~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l 168 (239)
||||||..|+||+.+|.+||+.||..+++||||||++.+..++.|..||.-+| +..+|+.+.+.|+.||+++..++.++
T Consensus 123 DYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQfl 201 (517)
T KOG0375|consen 123 DYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFL 201 (517)
T ss_pred cccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 57899999999999999999999999
Q ss_pred EEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCC-------CCCC-cCCCCCceeeCHHHHHHHHHH
Q 026377 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGWG-ISPRGAGYTFGQVLYSEFLPF 235 (239)
Q Consensus 169 ~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~-------~~~~-~~~rg~g~~fG~~~~~~fl~~ 235 (239)
|||||++|.+.++++|+.++|+.+.|.-++++|+|||||.+. +.|. ++.||-+|.|...|+..||..
T Consensus 202 CVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~ 276 (517)
T KOG0375|consen 202 CVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQN 276 (517)
T ss_pred EecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHh
Confidence 999999999999999999999999999999999999999852 2244 458999999999999999864
No 16
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.5e-47 Score=338.94 Aligned_cols=212 Identities=41% Similarity=0.780 Sum_probs=192.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCCCC--------CcceeccccccCCCC
Q 026377 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD--------TNYLFMGDYVDRGYY 96 (239)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~--------~~~vfLGD~vDrG~~ 96 (239)
..++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..+.++. .++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 357899999999999999999999999999999999999999999999999887643 479999999999999
Q ss_pred cHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCC-----hhHHHHHHHHHhhcCceEEEcCcEEEEc
Q 026377 97 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALVESEIFCLH 171 (239)
Q Consensus 97 s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~LP~~~~i~~~~l~vH 171 (239)
|+||+.+++.++..+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|+.||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999875 3588999999999999999999999999
Q ss_pred CCCCCCCCcHHhhhhccCcc-cCCCCCCccccccCCCCCC---CCCCcCC---CCCc--eeeCHHHHHHHHHHh
Q 026377 172 GGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQVLYSEFLPFV 236 (239)
Q Consensus 172 gGi~~~~~~~~~i~~~~r~~-~~~~~~~~~~llWsdp~~~---~~~~~~~---rg~g--~~fG~~~~~~fl~~~ 236 (239)
||++|...++++++.+.|+. ..+.++.+.+++||||... .+|.+++ ||.| +.||++++++||+.-
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n 252 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEEN 252 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHC
Confidence 99999999999999999986 4455667899999999863 4677665 9999 799999999999874
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=293.30 Aligned_cols=228 Identities=31% Similarity=0.582 Sum_probs=198.6
Q ss_pred CCChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCceeeecCCCCCHHHHHHHHHhcCCCCC-C
Q 026377 8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPD-T 82 (239)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~viGDIHG~~~~L~~ll~~~~~~~~-~ 82 (239)
+-++.+++.+|+.|+..+.+++..++.++.+|+++++..|++-++ +..|.|+||+||.+++|.-+|.+.|.+.. .
T Consensus 115 Pl~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~n 194 (631)
T KOG0377|consen 115 PLRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSN 194 (631)
T ss_pred CcCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCC
Confidence 456788999999999999999999999999999999999999776 45799999999999999999999998875 5
Q ss_pred cceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCC--hhHHHHHHHHHhhcCce
Q 026377 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLT 160 (239)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~LP~~ 160 (239)
.|||.||+||||.+|+|||..|+.+...||..+++-|||||+.++|-.|||.+|...+|.. ..+...+.+++++||++
T Consensus 195 pYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~ 274 (631)
T KOG0377|consen 195 PYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIG 274 (631)
T ss_pred CeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchh
Confidence 6999999999999999999999999999999999999999999999999999999999963 46778889999999999
Q ss_pred EEEcCcEEEEcCCCCCCCCcHHhhhhccCccc-----CCC----C-------------CCccccccCCCCCCCCCCcC-C
Q 026377 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----E-------------GPMCDLLWSDPDDRCGWGIS-P 217 (239)
Q Consensus 161 ~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~-----~~~----~-------------~~~~~llWsdp~~~~~~~~~-~ 217 (239)
.+++.++++||||++... .++-+.++.|-.- .|. + ..+.|++||||....|+.+| -
T Consensus 275 tiid~~ilvvHGGiSd~T-dl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~ 353 (631)
T KOG0377|consen 275 TIIDSRILVVHGGISDST-DLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTL 353 (631)
T ss_pred hhcccceEEEecCcccch-hHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccc
Confidence 999999999999997653 4555555544211 111 0 12568999999998887666 7
Q ss_pred CCCceeeCHHHHHHHHHHh
Q 026377 218 RGAGYTFGQVLYSEFLPFV 236 (239)
Q Consensus 218 rg~g~~fG~~~~~~fl~~~ 236 (239)
||.|++||+|+|.+||.+-
T Consensus 354 RGgG~yFGpDvT~~~Lqk~ 372 (631)
T KOG0377|consen 354 RGGGCYFGPDVTDNFLQKH 372 (631)
T ss_pred cCCcceeCchHHHHHHHHh
Confidence 9999999999999999874
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.98 E-value=1.2e-32 Score=248.57 Aligned_cols=224 Identities=38% Similarity=0.725 Sum_probs=204.6
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CceeeecCCCCCHHHHHHHHHhcCCCCC-Ccc
Q 026377 10 TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCPD-TNY 84 (239)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~~-~~~ 84 (239)
|++.+..+++.+.....++..-+-+|+..++.++...++++++. .++.+.||+||++.++.++++..+.++. ..+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 56677888888888889999999999999999999999998764 4699999999999999999999888764 679
Q ss_pred eeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEc
Q 026377 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 164 (239)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~ 164 (239)
+|.||++|||..+.|++..++..+..+|+++|++|||||...++..|||..++..+|+ ...+.-+.+.|..||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999996 445555568899999999999
Q ss_pred CcEEEEcCCCC-CCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHH
Q 026377 165 SEIFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYSEFLP 234 (239)
Q Consensus 165 ~~~l~vHgGi~-~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~~fl~ 234 (239)
++++.+|||+. +.-..++++++|.|+...+.++.+++++||||....|.+++.||.|..||.|+|++||.
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~ 395 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQ 395 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHh
Confidence 99999999985 44468999999999988899999999999999999999999999999999999999985
No 19
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=9.9e-30 Score=218.59 Aligned_cols=170 Identities=21% Similarity=0.361 Sum_probs=121.5
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC---------CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
|+++||||||||++.|.++|+++++. +.+++|||||||||||+|.+||++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999998874 45789999999999999999999999885 44579999999999
Q ss_pred hhhhhhhC-------chHHHHHHhCC------hhHHHHHHHHHhhcCceEEEc-CcEEEEcCCCCCCCC--cHHhhhhcc
Q 026377 125 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIE--TLDNIRNFD 188 (239)
Q Consensus 125 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~LP~~~~i~-~~~l~vHgGi~~~~~--~~~~i~~~~ 188 (239)
++++...+ ...++..+|.. ..+.+.+.+|++++|++..++ ++++|||||++|... ..++.....
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~~~ 158 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQTFV 158 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhhHH
Confidence 98765432 12345555532 235677889999999988764 679999999987631 111111100
Q ss_pred CcccCCCCCCccccccCCCCC-CCCCCcCCCCCc-eeeCHHHHHH
Q 026377 189 RVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAG-YTFGQVLYSE 231 (239)
Q Consensus 189 r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~g-~~fG~~~~~~ 231 (239)
.+ +.+....|+++.. +..|..+.+|.. ++|||+++..
T Consensus 159 l~------~~~~~~~~~~~~~~~~~~~~~~~g~~~vV~GHtp~~~ 197 (245)
T PRK13625 159 LY------GDITGEKHPDGSPVRRDWAKEYKGTAWIVYGHTPVKE 197 (245)
T ss_pred hh------ccccCCcCCCCCeeeeccchhcCCCcEEEECCCCCcc
Confidence 00 0111223444333 556777777765 6899998753
No 20
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.96 E-value=1.1e-28 Score=208.29 Aligned_cols=170 Identities=42% Similarity=0.692 Sum_probs=132.5
Q ss_pred eeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHH
Q 026377 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (239)
+|||||||++.+|.++++.++..+.+.+|||||+||||+.+.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999998876 7889999999999988765554332
Q ss_pred H--------HHHhCChhHHHHHHHHHhhcCceEEEcC-cEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCC
Q 026377 137 C--------LRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (239)
Q Consensus 137 ~--------~~~~~~~~~~~~~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp 207 (239)
. ...+.....+..+..|+..||++..++. +++|||||++|......+.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2333345677888899999999998876 99999999999886555443 2233445689999999
Q ss_pred CCCCCCCc----------------CCCCCceeeCHHHHHHHH
Q 026377 208 DDRCGWGI----------------SPRGAGYTFGQVLYSEFL 233 (239)
Q Consensus 208 ~~~~~~~~----------------~~rg~g~~fG~~~~~~fl 233 (239)
.....+.. ...+.-+++||+++....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~GHt~~~~~~ 195 (225)
T cd00144 154 LELPGGFGSSRRGGGPDAVEWFLKKNGLKLIVRGHTPVEEGY 195 (225)
T ss_pred CCCCCCCcCCCCCCCHHHHHHHHHHCCCeEEEEcCccccCcc
Confidence 76433221 223444788888776543
No 21
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.95 E-value=2.8e-28 Score=211.13 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=120.5
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhC
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (239)
|+++||||||||+++|.++|+++++. +.++++|+||+|||||+|.+|++++.++. .++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57999999999999999999999876 46889999999999999999999999875 35789999999999887666
Q ss_pred ch----HHHHHHhCChhHHHHHHHHHhhcCceEEEc-CcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCC
Q 026377 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (239)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~-~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp 207 (239)
+. .+....+-.....+++.+|++++|+....+ .++++||||++|.++..+......+.+.........+++.+..
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~fl~~my 156 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY 156 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 42 233333333456678899999999987654 3699999999999976555554444444444333333443333
Q ss_pred CC-CCCCCcCCCCCc
Q 026377 208 DD-RCGWGISPRGAG 221 (239)
Q Consensus 208 ~~-~~~~~~~~rg~g 221 (239)
.+ ...|.++..|..
T Consensus 157 gn~p~~W~~~l~g~~ 171 (279)
T TIGR00668 157 GDMPNRWSPELQGLA 171 (279)
T ss_pred CCCCccCCCCCchHH
Confidence 22 234666655543
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=4.2e-28 Score=211.18 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=101.4
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhC
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (239)
|+++||||||||+.+|.++++++++. ..+.+||+||+|||||+|.+|++++.++. .++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 46789999999999999999999999873 46899999999988776554
Q ss_pred ch----HHHHHHhCChhHHHHHHHHHhhcCceEEE-cCcEEEEcCCCCCCCCcHH
Q 026377 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLD 182 (239)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~~~~~ 182 (239)
.. .....++......+.+.+|++++|+...+ .+++++||||++|.+...+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~ 131 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLAT 131 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHH
Confidence 32 22334443334456788999999998776 4689999999999875444
No 23
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.95 E-value=1.1e-27 Score=206.59 Aligned_cols=130 Identities=22% Similarity=0.309 Sum_probs=104.1
Q ss_pred eeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCch
Q 026377 56 VTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (239)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (239)
++||||||||+++|+++|+++++. +.+.+||+||+|||||+|.||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 57889999999999999999999999986 3699999999999887655432
Q ss_pred ----HHHHHHhCChhHHHHHHHHHhhcCceEEEcC-cEEEEcCCCCCCCCcHHhhhhccC
Q 026377 135 ----DECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDR 189 (239)
Q Consensus 135 ----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~~~r 189 (239)
.+...++-.....+++.+|++++|+...+++ ++++||||++|.+...+.....++
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~e 136 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLARE 136 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHH
Confidence 2233333333445678999999999988764 899999999999865444333333
No 24
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=2.1e-27 Score=202.69 Aligned_cols=156 Identities=22% Similarity=0.363 Sum_probs=119.1
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC--CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (239)
|++++|||||||+..|.++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 58999999999999999999988543 468899999999999999999999998753 345799999999998765321
Q ss_pred --------------CchHHHHHHhCCh------------------------------hHHHHHHHHHhhcCceEEEcCcE
Q 026377 132 --------------GFYDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALVESEI 167 (239)
Q Consensus 132 --------------~~~~e~~~~~~~~------------------------------~~~~~~~~~~~~LP~~~~i~~~~ 167 (239)
....+++.+||.. ..+..+..|+++||++... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 1114566777521 0224556799999999885 689
Q ss_pred EEEcCCCCCCCCcHHhhhhccCcccCCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHH
Q 026377 168 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVLYS 230 (239)
Q Consensus 168 l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~g~~fG~~~~~ 230 (239)
+|||||+.|..+..+|. ..+++|.++ |.+...|.-++|||+++.
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f~~~~~g~~vV~GHTp~~ 202 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----FQPRKDGFTYVCGHTPTD 202 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----cCCCCCCcEEEECCCCCC
Confidence 99999999886644432 268999954 344455666899999874
No 25
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=1.9e-27 Score=203.07 Aligned_cols=123 Identities=23% Similarity=0.464 Sum_probs=98.6
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCCC----------CCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
|||+||||||||+.+|+++|+++++.+ .+++|||||||||||+|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999987653 468999999999999999999999998643 46999999999
Q ss_pred hhhhhhhhCc-------hHHHHHHhC--ChhHHHHHHHHHhhcCceEEEc-CcEEEEcCCCCCCC
Q 026377 124 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 178 (239)
Q Consensus 124 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~LP~~~~i~-~~~l~vHgGi~~~~ 178 (239)
.++++...+. ..++...+. .....+...+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9987653321 123344443 2346677889999999988765 47999999987653
No 26
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=3.2e-27 Score=205.01 Aligned_cols=164 Identities=20% Similarity=0.300 Sum_probs=122.9
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCCC------CCCcceeccccccCCCCcHHHHHHHHHhhhhCCC-cEEEEcCCcchhhh
Q 026377 55 PVTICGDIHGQFHDLAELFQIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 127 (239)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~~ 127 (239)
++++|||||||++.|.++++.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6999999999999999999876432 2456999999999999999999999999888875 68899999998765
Q ss_pred hhhhC-----------------------------------------c----------------------hHHHHHHhCCh
Q 026377 128 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 144 (239)
Q Consensus 128 ~~~~~-----------------------------------------~----------------------~~e~~~~~~~~ 144 (239)
..... | ..+++.+||..
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 32211 0 13567777742
Q ss_pred --------hHHHHHHHHHhhcCceEEEcCcE-------------EEEcCCCCCCCCcHHhhhhcc-CcccCCCCCCcccc
Q 026377 145 --------NIWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 202 (239)
Q Consensus 145 --------~~~~~~~~~~~~LP~~~~i~~~~-------------l~vHgGi~~~~~~~~~i~~~~-r~~~~~~~~~~~~l 202 (239)
.+.+...+|++.||+.... +++ +|||||+.|..+..+|.+.+. +....|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 2346688999999998774 455 999999999999888877643 3333333 488
Q ss_pred ccCCCCCCCCCCcCCC-----CCceeeCHH
Q 026377 203 LWSDPDDRCGWGISPR-----GAGYTFGQV 227 (239)
Q Consensus 203 lWsdp~~~~~~~~~~r-----g~g~~fG~~ 227 (239)
+|.+. .|...++ +.-++.||+
T Consensus 238 l~~R~----~f~~~~~~~~~~~~~VVhGHt 263 (304)
T cd07421 238 LSGRK----NVWNIPQELADKKTIVVSGHH 263 (304)
T ss_pred cccch----hhhcCcccccCCCeEEEECCC
Confidence 99844 3322222 445888987
No 27
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=4.7e-27 Score=199.22 Aligned_cols=116 Identities=23% Similarity=0.347 Sum_probs=93.5
Q ss_pred eeecCCCCCHHHHHHHHHhcCCC--------CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhh
Q 026377 57 TICGDIHGQFHDLAELFQIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (239)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999998765 467899999999999999999999999863 34799999999999875
Q ss_pred hhhCc------h-----------HHHHHHhC-ChhHHHHHHHHHhhcCceEEEcCcEEEEcCCCC
Q 026377 129 QVYGF------Y-----------DECLRKYG-NANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (239)
Q Consensus 129 ~~~~~------~-----------~e~~~~~~-~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~ 175 (239)
...+. . .++.+.++ .....+.+.+||++||+.... ++++|||||++
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 33210 0 13344443 234567789999999998875 68999999986
No 28
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=2.3e-26 Score=194.46 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=109.9
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (239)
.+|++||||||||+++|+++|+.+++. ..+++|||||+|||||+|.+|++++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 459999999999999999999999886 5678999999999999999999999752 478999999999886542
Q ss_pred CchHHHHH--------HhCC--hhHHHHHHHHHhhcCceEEEc---CcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCC
Q 026377 132 GFYDECLR--------KYGN--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (239)
Q Consensus 132 ~~~~e~~~--------~~~~--~~~~~~~~~~~~~LP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~ 198 (239)
+.....+. .+.. ...+..+.+|+++||+...+. +++++||||++... ...+ . . ..
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~~~~-~----~------~~ 157 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-YEWQ-K----D------VD 157 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-hhhh-c----c------CC
Confidence 21101111 1111 123456678999999987653 47999999984221 1110 0 0 01
Q ss_pred ccccccCCCCCCCCCCc-CCCCC-ceeeCHHHHHH
Q 026377 199 MCDLLWSDPDDRCGWGI-SPRGA-GYTFGQVLYSE 231 (239)
Q Consensus 199 ~~~llWsdp~~~~~~~~-~~rg~-g~~fG~~~~~~ 231 (239)
..+++|+++........ ...|. .++|||+++..
T Consensus 158 ~~~~~w~r~~~~~~~~~~~~~~~~~vv~GHT~~~~ 192 (218)
T PRK11439 158 LHQVLWSRSRLGERQKGQGITGADHFWFGHTPLRH 192 (218)
T ss_pred ccceEEcChhhhhccccccccCCCEEEECCccCCC
Confidence 24679986543222111 12233 37999998753
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.92 E-value=5.5e-25 Score=184.49 Aligned_cols=165 Identities=21% Similarity=0.275 Sum_probs=114.8
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhC
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (239)
+||++|||||||+.+|.++++.++.. ..+.++++||+||||+++.++++++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 58999999999999999999998764 467899999999999999999999875 24899999999998876543
Q ss_pred c--hHHHHHHhCC--------hhHHHHHHHHHhhcCceEEEc---CcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCCc
Q 026377 133 F--YDECLRKYGN--------ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 199 (239)
Q Consensus 133 ~--~~e~~~~~~~--------~~~~~~~~~~~~~LP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~ 199 (239)
. ..+.+...+. ...++...+|+++||+...++ .++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 1 2223333332 124556788999999988764 379999999865531 11110 0 11122334
Q ss_pred cccccCCCCCCCCCCcCCCC-CceeeCHHHHH
Q 026377 200 CDLLWSDPDDRCGWGISPRG-AGYTFGQVLYS 230 (239)
Q Consensus 200 ~~llWsdp~~~~~~~~~~rg-~g~~fG~~~~~ 230 (239)
.+++|++|..........+| .-++|||+.+.
T Consensus 149 ~~~~w~~~~~~~~~~~~~~~~~~iV~GHTh~~ 180 (207)
T cd07424 149 EELLWSRTRIQKAQTQPIKGVDAVVHGHTPVK 180 (207)
T ss_pred eeeeeccchhhhcCccccCCCCEEEECCCCCC
Confidence 67899976532222222333 34899998765
No 30
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=3.2e-23 Score=175.33 Aligned_cols=160 Identities=19% Similarity=0.249 Sum_probs=106.2
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (239)
.+|++||||||||+++|+++++.+.+. ..+.+||+||+|||||+|.+|++++.+ .++++||||||.++++...
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 459999999999999999999998855 467899999999999999999999864 2589999999998876432
Q ss_pred CchH--------HHHHHhCCh--hHHHHHHHHHhhcCceEEEc---CcEEEEcCCCCCCCCcHHhhhhccCcccCCCCCC
Q 026377 132 GFYD--------ECLRKYGNA--NIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (239)
Q Consensus 132 ~~~~--------e~~~~~~~~--~~~~~~~~~~~~LP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~ 198 (239)
.-.. +...+.... ........|+++||+...+. .++++||||++... ..... ...
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~----------~~~ 155 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK----------EIA 155 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----------ccc
Confidence 1100 111111111 12234466999999987654 36899999983221 11110 011
Q ss_pred ccccccCCCCCCC---CCCcCCC-CCceeeCHHHHH
Q 026377 199 MCDLLWSDPDDRC---GWGISPR-GAGYTFGQVLYS 230 (239)
Q Consensus 199 ~~~llWsdp~~~~---~~~~~~r-g~g~~fG~~~~~ 230 (239)
..+++|.++.... .|..... +.-++|||+.+.
T Consensus 156 ~~~~~w~r~~~~~~~~~~~~~~~~~~~vv~GHTh~~ 191 (218)
T PRK09968 156 ESELLWPVDRVQKSLNGELQQINGADYFIFGHMMFD 191 (218)
T ss_pred hhhceeCcHHHhhCccccccccCCCCEEEECCCCcC
Confidence 2466898554322 2322222 234899998764
No 31
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.88 E-value=1.3e-22 Score=170.49 Aligned_cols=121 Identities=24% Similarity=0.414 Sum_probs=92.0
Q ss_pred eeecCCCCCHHHHHHHHHhcCC--------CCCCcceeccccccCCCCcHHHHHHHHHhhhh---CCCcEEEEcCCcchh
Q 026377 57 TICGDIHGQFHDLAELFQIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 125 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~---~p~~v~~lrGNHE~~ 125 (239)
+||||||||+++|.++|+.++. .+.+.+|++||+|||||++.+|+++++++... .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998874 35688999999999999999999999998753 456799999999999
Q ss_pred hhhhhhCch-HHHHHHhCC-----h---hHHHHHHHHHhhcCceEEEcCcEEEEcCCCCCCC
Q 026377 126 QITQVYGFY-DECLRKYGN-----A---NIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSI 178 (239)
Q Consensus 126 ~~~~~~~~~-~e~~~~~~~-----~---~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~ 178 (239)
.++..+.+. ......... . .....+.+|++++|+...++ +++|||||++|.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~w 141 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPLW 141 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHHH
Confidence 886433221 111111100 1 11235589999999998864 6899999996543
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.27 E-value=1.6e-11 Score=95.79 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=56.9
Q ss_pred CceeeecCCCCCHHHH----HHHHHhcCCCCCCcceeccccccCCCCcHHHHHHH--HHhhhhCCCcEEEEcCCcchhhh
Q 026377 54 SPVTICGDIHGQFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQI 127 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~l~~~~p~~v~~lrGNHE~~~~ 127 (239)
+||++|||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999987 44445555566788999999999999887766654 33333445569999999999865
Q ss_pred hh
Q 026377 128 TQ 129 (239)
Q Consensus 128 ~~ 129 (239)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 33
>PRK09453 phosphodiesterase; Provisional
Probab=99.24 E-value=1.2e-11 Score=101.61 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=57.3
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCC--------cHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
|||.++||+||++.++.++++.+...+.+.++++||++|+|++ +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999999998866777899999999999873 456777776543 2489999999975
Q ss_pred h
Q 026377 126 Q 126 (239)
Q Consensus 126 ~ 126 (239)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.15 E-value=1.4e-10 Score=92.29 Aligned_cols=86 Identities=23% Similarity=0.363 Sum_probs=64.2
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCch
Q 026377 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (239)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (239)
||.++||+||+...+.++++.+.. .+.++++||++++++.+. +.. ...+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCcCC-------
Confidence 589999999999999999998755 678999999999998765 111 2348999999998532
Q ss_pred HHHHHHhCChhHHHHHHHHHhhcCceEEE--c-CcEEEEcCCCCCCC
Q 026377 135 DECLRKYGNANIWKIFTDLFDYFPLTALV--E-SEIFCLHGGLSPSI 178 (239)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~LP~~~~i--~-~~~l~vHgGi~~~~ 178 (239)
+..+|....+ + .+++++||...+..
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~~~ 89 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLYGVK 89 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcccccc
Confidence 3455644332 2 37999999875443
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.10 E-value=1.2e-10 Score=93.40 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=50.9
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCC-CCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
|++.++||+||+..++..+++.+... +.+.++++||++ +.++++.+.++. ..+++++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 68999999999998888777766665 678899999998 457887776553 2389999999983
No 36
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.06 E-value=7e-10 Score=94.69 Aligned_cols=114 Identities=22% Similarity=0.251 Sum_probs=75.8
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhh----h
Q 026377 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ----V 130 (239)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~----~ 130 (239)
+|+++|||||+..... .+.+.....+.++++||+++ .+.++++.+.++. +| +++++||||.+.... .
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~p--~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGN---ESVQLVRAISSLP--LP--KAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCc---ChHHHHHHHHhCC--CC--eEEEcCCCcccccccccchH
Confidence 7899999999987643 12223334578999999986 4567777776553 33 899999999854210 0
Q ss_pred --------------------------------hCc--------hH-HHHHHhCChhHHHHHHHHHhhcCceEEEcCcEEE
Q 026377 131 --------------------------------YGF--------YD-ECLRKYGNANIWKIFTDLFDYFPLTALVESEIFC 169 (239)
Q Consensus 131 --------------------------------~~~--------~~-e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~ 169 (239)
.+| .+ ++...|+.....+.+...++.++.+.....++++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 000 01 4555666566677777888888633333357999
Q ss_pred EcCCCCCC
Q 026377 170 LHGGLSPS 177 (239)
Q Consensus 170 vHgGi~~~ 177 (239)
+|+++...
T Consensus 153 aH~~~~G~ 160 (238)
T cd07397 153 AHNGPSGL 160 (238)
T ss_pred eCcCCcCC
Confidence 99998654
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.03 E-value=2.6e-10 Score=90.11 Aligned_cols=62 Identities=23% Similarity=0.464 Sum_probs=47.3
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (239)
|||+++||+|++..++.++++.+ ...+.++++||++++ .++++.+... .+++++||||....
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~ 62 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAF 62 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccc
Confidence 68999999999999999999988 347788899999993 7777777655 39999999997553
No 38
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.94 E-value=1.7e-09 Score=91.79 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=58.0
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
++|.++||+||++..+.++++.....+.+.+|++||++++|+..-++..++..+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 579999999999999999999776667788999999999997776666666655432 12389999999985
No 39
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.76 E-value=1.1e-08 Score=79.72 Aligned_cols=61 Identities=20% Similarity=0.292 Sum_probs=42.8
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcH--HHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+|.++||+||++. .....+.+.+|++||+++++..+. +.++++.+++ .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 5899999999987 223345677889999999876432 3555555443 22 357899999964
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.71 E-value=2.2e-08 Score=81.43 Aligned_cols=66 Identities=23% Similarity=0.330 Sum_probs=48.3
Q ss_pred eeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCC-cHHHHHHHHHhhhhCCCcEEEEcCCcchhhh
Q 026377 56 VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHESRQI 127 (239)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (239)
|+++||+||++..+.. ..+...+.+.+|+.||++++|.. ..+.++.+..++ ..+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~----~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAIG----VPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhcC----CCEEEEcCCCCCHHH
Confidence 5789999999999877 33444556889999999999876 333444444332 348999999998643
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.62 E-value=1.5e-07 Score=70.88 Aligned_cols=67 Identities=24% Similarity=0.396 Sum_probs=48.7
Q ss_pred eeecCCCCCHHHHHHHH--HhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 57 TICGDIHGQFHDLAELF--QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999999888765 44445566788899999999888776554422222233345999999999
No 42
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.59 E-value=6.9e-08 Score=81.05 Aligned_cols=71 Identities=21% Similarity=0.193 Sum_probs=54.8
Q ss_pred CceeeecCCCCCHH----HHHHHHHhcCCCCCCcceeccccccCCCCcH-HHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 54 SPVTICGDIHGQFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 54 ~~i~viGDIHG~~~----~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
+++++++|+|+... .+.++++.+.....+.++++||+++.+.... .+.+++..+....| ++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~~--v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPLG--VYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCCC--EEEECCCccccc
Confidence 68999999998754 6777887776666778889999999887764 56666665543344 999999999854
No 43
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.59 E-value=9.2e-08 Score=83.46 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=54.5
Q ss_pred CCceeeecCCCCC----HHHHHHHHHhcCCCCCCcceeccccccCC--CCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 53 ~~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
.++|++++|+|.. ...+.++++.+.....+.++++||++|.+ ....++.+.+..++...| ++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 4789999999976 55677788777666778899999999953 233456667777765555 99999999974
No 44
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.55 E-value=2.8e-07 Score=75.61 Aligned_cols=62 Identities=24% Similarity=0.342 Sum_probs=43.1
Q ss_pred ceeeecCCC-CCHH-HH-HHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 55 PVTICGDIH-GQFH-DL-AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 55 ~i~viGDIH-G~~~-~L-~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+|.||||+| |... .+ ..+++.+...+.+.++.+||+++ .++++++..+. ..+++++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 11 12333333345678999999987 67888876653 1489999999973
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.49 E-value=7.9e-08 Score=77.37 Aligned_cols=67 Identities=22% Similarity=0.148 Sum_probs=47.0
Q ss_pred eeeecCCCCCHHHHHHHH-HhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 56 VTICGDIHGQFHDLAELF-QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 56 i~viGDIHG~~~~L~~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+.++||+|+........+ +.....+.+.++++||+++++.....+. ++.... .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 578999999987776654 3334455677889999999887655443 222222 334599999999986
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.42 E-value=3.7e-07 Score=78.21 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=48.3
Q ss_pred CceeeecCCCCCH------HHHHHHHHhcCCCCCCcceeccccccC--C-----CCcHHHHHHHHHhhhhCCCcEEEEcC
Q 026377 54 SPVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYPQRITILRG 120 (239)
Q Consensus 54 ~~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~l~~~~p~~v~~lrG 120 (239)
|++++|||+|... ..+.+.++.. ....+.++++||++|. | +...++++.+..+... +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 2344444332 2346789999999985 2 2245677777777533 235999999
Q ss_pred Ccchhh
Q 026377 121 NHESRQ 126 (239)
Q Consensus 121 NHE~~~ 126 (239)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 47
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.36 E-value=5.9e-07 Score=76.74 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=50.4
Q ss_pred ceeeecCCCCCH------HHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 55 PVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 55 ~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+|++++|+|++. ..+.++++.+.....+.+|+.||++++.+.+.++++.+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 589999999763 23566777666566788999999999876666666666553 222489999999964
No 48
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.23 E-value=2.5e-06 Score=73.76 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=50.1
Q ss_pred CceeeecCCCC-C-----------HHHHHHHHHhcCCCCCCcceeccccccCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 026377 54 SPVTICGDIHG-Q-----------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 117 (239)
Q Consensus 54 ~~i~viGDIHG-~-----------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~l~~~~p~~v~~ 117 (239)
|+++.++|+|- . ...|.++++.+.....+.+|+.||++|+...+.+. ..++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 68999999993 2 23556666665555678899999999987655443 24444454333235899
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 49
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.20 E-value=4.1e-06 Score=79.28 Aligned_cols=116 Identities=18% Similarity=0.260 Sum_probs=63.6
Q ss_pred cCCceeeecCCC-CCH----HHHHHHHHhcC---------CCCCCcceeccccccC-CCCc---------------HHHH
Q 026377 52 VKSPVTICGDIH-GQF----HDLAELFQIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 101 (239)
Q Consensus 52 ~~~~i~viGDIH-G~~----~~L~~ll~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl 101 (239)
.+.++++|+|+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 356899999999 653 23445544433 2234678999999984 3221 1355
Q ss_pred HHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHhCChhHHHHHHHHHhhcCceEEEcC-cEEEEcCCC
Q 026377 102 TLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGL 174 (239)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~-~~l~vHgGi 174 (239)
.+|.++.... .+++++||||.........-..++..+.-.. .-..++.. |....+++ +++++||-.
T Consensus 322 ~~L~~L~~~i--~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 322 EYLKQIPEDI--KIIISPGNHDAVRQAEPQPAFPEEIRSLFPE----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHHhhhcCC--eEEEecCCCcchhhccCCCCccHHHHHhcCc----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 5666664333 4999999999754321111011111111000 01233343 54444444 789999964
No 50
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.18 E-value=4.2e-06 Score=72.76 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=48.5
Q ss_pred ceeeecCCC--C-----------CHHHHHHHHHhcCCCCCCcceeccccccCCCC-cHHHHHHHHHhhhhCCCcEEEEcC
Q 026377 55 PVTICGDIH--G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRG 120 (239)
Q Consensus 55 ~i~viGDIH--G-----------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrG 120 (239)
|+++|||+| . ....+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 789999999 2 24567777877765557788999999998863 223333333322222234999999
Q ss_pred Ccchhh
Q 026377 121 NHESRQ 126 (239)
Q Consensus 121 NHE~~~ 126 (239)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999853
No 51
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.13 E-value=4.5e-06 Score=75.22 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=49.3
Q ss_pred CceeeecCCC-C-----------CHHHHHHHHHhcCCCCCCcceeccccccCC-CCcHHHHHHHHH----hhhhCCCcEE
Q 026377 54 SPVTICGDIH-G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYPQRIT 116 (239)
Q Consensus 54 ~~i~viGDIH-G-----------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~----l~~~~p~~v~ 116 (239)
||++.+||+| | ....|.++++.+.....+.+|+.||++|+. +.+.+++.++.. .-...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 3 234556666666666678899999999985 445555444433 1112234599
Q ss_pred EEcCCcchh
Q 026377 117 ILRGNHESR 125 (239)
Q Consensus 117 ~lrGNHE~~ 125 (239)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 52
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.06 E-value=5.4e-06 Score=70.57 Aligned_cols=68 Identities=9% Similarity=0.105 Sum_probs=43.3
Q ss_pred eeeecCCCCCH------HHHHHHHHhcCCCCCCcceeccccccCC-----CC--cHHHHHHHHHhhhhCCCcEEEEcCCc
Q 026377 56 VTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYPQRITILRGNH 122 (239)
Q Consensus 56 i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~l~~~~p~~v~~lrGNH 122 (239)
+++|||+|... ..+.+.+..... ..+.++++||++|.. +. ..++.+.+..+... +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 46899999543 233333433222 567889999999952 11 13456666666532 33599999999
Q ss_pred chh
Q 026377 123 ESR 125 (239)
Q Consensus 123 E~~ 125 (239)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 53
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.04 E-value=7.6e-06 Score=63.52 Aligned_cols=57 Identities=19% Similarity=0.134 Sum_probs=41.6
Q ss_pred eeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
.||||+||....+.++... ..+.+.++++||+. .+++..+..++ .. .++.++||||.
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~-~~--~~~~V~GN~D~ 57 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML-NV--PVYYVHGNHDV 57 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc-CC--CEEEEeCCCcc
Confidence 4899999998877776654 45678899999973 34566665542 12 38999999993
No 54
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.03 E-value=1.3e-05 Score=67.96 Aligned_cols=67 Identities=28% Similarity=0.344 Sum_probs=46.6
Q ss_pred ceeeecCCCCC------------HHHHHHHHHhcCCC--CCCcceeccccccCCCC-cH-HHHHHHHHhhhhCCCcEEEE
Q 026377 55 PVTICGDIHGQ------------FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYY-SV-ETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 55 ~i~viGDIHG~------------~~~L~~ll~~~~~~--~~~~~vfLGD~vDrG~~-s~-evl~~l~~l~~~~p~~v~~l 118 (239)
|++++||+|=. ...++++++.+... ..+-+|++||+++.|.. .. .+.+.+..+ +..++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 58999999944 34577777766554 56778899999998653 22 233444333 2348999
Q ss_pred cCCcchh
Q 026377 119 RGNHESR 125 (239)
Q Consensus 119 rGNHE~~ 125 (239)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 55
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.00 E-value=1e-05 Score=67.49 Aligned_cols=72 Identities=25% Similarity=0.257 Sum_probs=48.9
Q ss_pred ceeeecCCC-CCH--------------HHHHHHHHhcCCCCCCcceeccccccCCCCcHHHH----HHHHHhhhhCCCcE
Q 026377 55 PVTICGDIH-GQF--------------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQRI 115 (239)
Q Consensus 55 ~i~viGDIH-G~~--------------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~p~~v 115 (239)
||+.++|+| |.. ..|.++++.+.....+.+|+.||+++....+.+.+ +.+.+++. .+..+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 588999999 322 23666777666666778999999999876554433 33333321 12348
Q ss_pred EEEcCCcchhhh
Q 026377 116 TILRGNHESRQI 127 (239)
Q Consensus 116 ~~lrGNHE~~~~ 127 (239)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998654
No 56
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.98 E-value=1.1e-05 Score=65.28 Aligned_cols=67 Identities=25% Similarity=0.396 Sum_probs=44.8
Q ss_pred eeeecCCCCCHHHH---------------HHHHHhcCC--CCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 026377 56 VTICGDIHGQFHDL---------------AELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 56 i~viGDIHG~~~~L---------------~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 118 (239)
+++|+|+|=..... .++++.+.. .+.+.+|++||+++++..+.. ++.+.++. ..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~----~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLN----GRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCC----CCeEEE
Confidence 47899999666532 223433222 346789999999999886543 55554442 348999
Q ss_pred cCCcchhhh
Q 026377 119 RGNHESRQI 127 (239)
Q Consensus 119 rGNHE~~~~ 127 (239)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999998643
No 57
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.98 E-value=1.4e-05 Score=62.58 Aligned_cols=68 Identities=22% Similarity=0.257 Sum_probs=43.6
Q ss_pred eeeecCCCCCHH------H----HHHHHHhcCCCCCCcceeccccccCCCCc--HHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 56 VTICGDIHGQFH------D----LAELFQIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 56 i~viGDIHG~~~------~----L~~ll~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
|+.++|+|=... . |.++++.+...+.+.++++||+++.|... .....++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 568899994321 1 22345555556678899999999988742 12344455554321 24899999999
Q ss_pred h
Q 026377 124 S 124 (239)
Q Consensus 124 ~ 124 (239)
.
T Consensus 80 ~ 80 (144)
T cd07400 80 V 80 (144)
T ss_pred E
Confidence 7
No 58
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.96 E-value=2.3e-05 Score=63.67 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=35.2
Q ss_pred HHHHHHHhcCCCCCCcceeccccccCCCCc-HHHHHH--HHHhhhhCCCcEEEEcCCcchhh
Q 026377 68 DLAELFQIGGKCPDTNYLFMGDYVDRGYYS-VETVTL--LVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 68 ~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~--l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
.+.++.+.+...+.+.+|++||+++....+ .+.... +..+ ...+..+++++||||...
T Consensus 29 ~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 29 TLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 344555555556678999999999865433 222221 1111 123346999999999853
No 59
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.95 E-value=1.7e-05 Score=69.17 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=47.2
Q ss_pred cCCceeeecCCC-C-----------CHHHHHHHHHhcCC--CCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEE
Q 026377 52 VKSPVTICGDIH-G-----------QFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (239)
Q Consensus 52 ~~~~i~viGDIH-G-----------~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 117 (239)
-.++++.|+|+| . ....|.++++.+.. ...+-+|+.||+++.|. .+-...+.+.-...+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 347899999999 1 24667788876643 23577889999999874 22222222222222334999
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
+.||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 60
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.89 E-value=3.1e-05 Score=65.89 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=45.4
Q ss_pred CceeeecCCC-CCHHH----------------HHHHHHhcCCCCCCcceeccccccCCCC---cHHHHHHHHHhhhhCCC
Q 026377 54 SPVTICGDIH-GQFHD----------------LAELFQIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYPQ 113 (239)
Q Consensus 54 ~~i~viGDIH-G~~~~----------------L~~ll~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~l~~~~p~ 113 (239)
.++.+|+|+| |--.. |.++.+.+.....+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6799999999 54332 2333344445557889999999975443 233344554433 3
Q ss_pred cEEEEcCCcchhh
Q 026377 114 RITILRGNHESRQ 126 (239)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (239)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999753
No 61
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.86 E-value=2.7e-05 Score=63.57 Aligned_cols=65 Identities=15% Similarity=0.206 Sum_probs=46.7
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
.|+|.|+||.||...+..+..+.....+.+.+|.+||++...... .+..- ...+++.++||.|..
T Consensus 1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~~---~~~~i~~V~GN~D~~ 65 (172)
T COG0622 1 MMKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEGG---LAAKLIAVRGNCDGE 65 (172)
T ss_pred CcEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhcc---cccceEEEEccCCCc
Confidence 368999999999997666666665566678888999999764322 22110 124589999999985
No 62
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.84 E-value=3.1e-05 Score=65.23 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=43.6
Q ss_pred ceeeecCCCC----CHHHH----HHHHHhcCCCCCCcceeccccccCCCCcH---HHHHHHHHhh-hhCCCcEEEEcCCc
Q 026377 55 PVTICGDIHG----QFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALK-VRYPQRITILRGNH 122 (239)
Q Consensus 55 ~i~viGDIHG----~~~~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~l~-~~~p~~v~~lrGNH 122 (239)
+++++||+|- ....+ ..+.+.+.....+.+|++||+++.+.... ...+.+..+. ...| +++++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 6899999995 22333 33444444445677889999999988432 2233333343 2234 88999999
Q ss_pred ch
Q 026377 123 ES 124 (239)
Q Consensus 123 E~ 124 (239)
|.
T Consensus 80 D~ 81 (214)
T cd07399 80 DL 81 (214)
T ss_pred cc
Confidence 94
No 63
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.82 E-value=5.1e-05 Score=62.87 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=44.3
Q ss_pred CceeeecCCCCCHH------------HHHHHHHhcCCCCCCcceeccccccCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q 026377 54 SPVTICGDIHGQFH------------DLAELFQIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 54 ~~i~viGDIHG~~~------------~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~p~~v~~l 118 (239)
.++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999996332 122222334444567899999999876653 455555444322222238999
Q ss_pred cCCcc
Q 026377 119 RGNHE 123 (239)
Q Consensus 119 rGNHE 123 (239)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.82 E-value=2.6e-05 Score=62.56 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=30.9
Q ss_pred CCCCCCcceeccccccCCCCc-HH----HHHHHHHhhhhC-CCcEEEEcCCcchhh
Q 026377 77 GKCPDTNYLFMGDYVDRGYYS-VE----TVTLLVALKVRY-PQRITILRGNHESRQ 126 (239)
Q Consensus 77 ~~~~~~~~vfLGD~vDrG~~s-~e----vl~~l~~l~~~~-p~~v~~lrGNHE~~~ 126 (239)
.....+.+|++||+++.+... .+ .+..+.++.... +..++++.||||...
T Consensus 35 ~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 35 WLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 344567899999999987642 22 222233222111 235899999999853
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.82 E-value=4.4e-05 Score=66.41 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=44.6
Q ss_pred eeeecCCCCCHHHHHHHHHhc---CCCCCCcceeccccccCCCCc-HHH----------HHH---HHHhhhhCCCcEEEE
Q 026377 56 VTICGDIHGQFHDLAELFQIG---GKCPDTNYLFMGDYVDRGYYS-VET----------VTL---LVALKVRYPQRITIL 118 (239)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~---~~~~~~~~vfLGD~vDrG~~s-~ev----------l~~---l~~l~~~~p~~v~~l 118 (239)
|+|+||+||+++.+...++.. ...+.+-+|++||+-..+..+ .+. .++ +.. ....|--+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEEE
Confidence 689999999999987754432 234567888999996544333 221 111 111 22245447999
Q ss_pred cCCcchh
Q 026377 119 RGNHESR 125 (239)
Q Consensus 119 rGNHE~~ 125 (239)
.||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999974
No 66
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=97.78 E-value=2.2e-05 Score=60.47 Aligned_cols=105 Identities=48% Similarity=0.825 Sum_probs=78.5
Q ss_pred hhhhCchHHHHHHhCChhHHHH---HHHHHhhcCceEEEcC-cEEEEcCCCCCCC-CcHHhhhhccCcc--cCCCCCCcc
Q 026377 128 TQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMC 200 (239)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~-~~~~~i~~~~r~~--~~~~~~~~~ 200 (239)
...+++..++...++....|.. ...+|+.+|+.+..++ .++|.|++++|.. ....+++...|.. .+...+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445555666666654324544 8999999999988777 8899999999875 6777777777766 677777778
Q ss_pred ccccCCCCC--CCCCCcCCCCCceeeCHHHHHHHH
Q 026377 201 DLLWSDPDD--RCGWGISPRGAGYTFGQVLYSEFL 233 (239)
Q Consensus 201 ~llWsdp~~--~~~~~~~~rg~g~~fG~~~~~~fl 233 (239)
+.+|++|.. ...|.++++|.+..+ ++.+..|.
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~ 117 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFG 117 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHh
Confidence 889999885 688999998888776 66666655
No 67
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.78 E-value=5.9e-05 Score=69.49 Aligned_cols=54 Identities=17% Similarity=0.197 Sum_probs=43.1
Q ss_pred CCceeeecCCCCC------------HHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHH
Q 026377 53 KSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (239)
Q Consensus 53 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (239)
.+||++++|+|-- +.+|.++++.+.....+-+|+.||++|+..-|.+++..+++
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 4689999999943 45778888887777778899999999999888887655444
No 68
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.75 E-value=4.4e-05 Score=65.06 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=40.5
Q ss_pred eeeecCCCCCH--------------HHHHHHHHhcCC--CCCCcceeccccccCCCCc--HHHHHHHHHhhhhCCCcEEE
Q 026377 56 VTICGDIHGQF--------------HDLAELFQIGGK--CPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITI 117 (239)
Q Consensus 56 i~viGDIHG~~--------------~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~ 117 (239)
|++++|+|-.. +-+.++.+.+.. ++.+-+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 57899999651 222333332211 3567888999999877532 2344444433 223899
Q ss_pred EcCCcch
Q 026377 118 LRGNHES 124 (239)
Q Consensus 118 lrGNHE~ 124 (239)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999996
No 69
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.73 E-value=9.7e-05 Score=63.86 Aligned_cols=73 Identities=19% Similarity=0.290 Sum_probs=51.8
Q ss_pred CceeeecCCCCC------HHHHHHHHHhcCCCCCCcceeccccccCCCC-cHH-HHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 54 SPVTICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVE-TVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 54 ~~i~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
++++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|.. +.+ ..++|. +...|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~--~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA--RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh--hccCCCceEeeCCCCcCC
Confidence 478999999977 3456677788876777889999999999632 222 222332 124455699999999987
Q ss_pred hhh
Q 026377 126 QIT 128 (239)
Q Consensus 126 ~~~ 128 (239)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 70
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.69 E-value=6.2e-05 Score=69.46 Aligned_cols=71 Identities=21% Similarity=0.225 Sum_probs=47.1
Q ss_pred CceeeecCCCCCH--------HH----HHHHHHhcCCCCCCcceeccccccCCCCcHHHH----HHHHHhhhhCCCcEEE
Q 026377 54 SPVTICGDIHGQF--------HD----LAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQRITI 117 (239)
Q Consensus 54 ~~i~viGDIHG~~--------~~----L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~p~~v~~ 117 (239)
|+++.++|+|-.. .+ +..+.+.+.....+.+|+.||++|++..+.... .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5899999999321 11 344555555566788999999999976554322 333444422 234999
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999974
No 71
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.64 E-value=8.1e-05 Score=65.49 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=52.3
Q ss_pred CCceeeecCCCCCHHH--HHHHHHhcCCCCCCcceeccccccC-C-CCcHHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 53 KSPVTICGDIHGQFHD--LAELFQIGGKCPDTNYLFMGDYVDR-G-YYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~--L~~ll~~~~~~~~~~~vfLGD~vDr-G-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
..+|+.++|+|-+... ..+.+..+.....+-+++.|||+|+ . +....+...+..|+..+| ++++.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccccc
Confidence 4479999999988765 2233334434444788899999995 4 445557888888886655 999999999864
No 72
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.60 E-value=8.1e-05 Score=63.73 Aligned_cols=68 Identities=19% Similarity=0.263 Sum_probs=41.0
Q ss_pred eeecCCC--CCH---HHHHHHHHhcCCC-----CCCcceeccccccCCCC---------------c-HHHHHHHHHhhhh
Q 026377 57 TICGDIH--GQF---HDLAELFQIGGKC-----PDTNYLFMGDYVDRGYY---------------S-VETVTLLVALKVR 110 (239)
Q Consensus 57 ~viGDIH--G~~---~~L~~ll~~~~~~-----~~~~~vfLGD~vDrG~~---------------s-~evl~~l~~l~~~ 110 (239)
++|||+| +.. ..+..+++.+... ..+.+|++||++|+... . ..+.+++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 331 2334444433222 23788999999997310 0 1244455555433
Q ss_pred CCCcEEEEcCCcchhh
Q 026377 111 YPQRITILRGNHESRQ 126 (239)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (239)
-.++++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 34999999999853
No 73
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.60 E-value=0.0001 Score=61.41 Aligned_cols=69 Identities=22% Similarity=0.212 Sum_probs=38.6
Q ss_pred eeecCCCCC---HHH---HHHHHHhcCCCCCCcceeccccccC--CCC-----c-HHHHHHHHHhhhhCCCcEEEEcCCc
Q 026377 57 TICGDIHGQ---FHD---LAELFQIGGKCPDTNYLFMGDYVDR--GYY-----S-VETVTLLVALKVRYPQRITILRGNH 122 (239)
Q Consensus 57 ~viGDIHG~---~~~---L~~ll~~~~~~~~~~~vfLGD~vDr--G~~-----s-~evl~~l~~l~~~~p~~v~~lrGNH 122 (239)
++|||+|-. ... +..+++.......+.+|++||++|. ++. . .+.+..+.... .....++++.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 589999922 222 2222222212456889999999984 111 1 12222333322 2334699999999
Q ss_pred chhh
Q 026377 123 ESRQ 126 (239)
Q Consensus 123 E~~~ 126 (239)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9854
No 74
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.59 E-value=0.00014 Score=62.84 Aligned_cols=70 Identities=16% Similarity=0.026 Sum_probs=44.4
Q ss_pred CceeeecCCCCCH----------------HHHHHHHHhcCCC--CCCcceeccccccCCCCcH-------HHHHHHHHhh
Q 026377 54 SPVTICGDIHGQF----------------HDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV-------ETVTLLVALK 108 (239)
Q Consensus 54 ~~i~viGDIHG~~----------------~~L~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~-------evl~~l~~l~ 108 (239)
-+++++||+|-.. ..++++++.+... ..+.+|++||+++.|.... +..+.+..+.
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 4688999999763 1345566655433 4567889999999887541 1222222221
Q ss_pred hhCCCcEEEEcCCcchh
Q 026377 109 VRYPQRITILRGNHESR 125 (239)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (239)
.+-.++.+.||||..
T Consensus 85 --~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 --PDIPLVCVCGNHDVG 99 (262)
T ss_pred --CCCcEEEeCCCCCCC
Confidence 122489999999974
No 75
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.57 E-value=6.4e-05 Score=65.76 Aligned_cols=70 Identities=20% Similarity=0.213 Sum_probs=43.6
Q ss_pred CCceeeecCCCCC----HHHHHHHHHhcCCCCCCcceeccccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 53 ~~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
..+++++||.|.. ...+.++.+. ....+-+|++||+++.+... -.....+..+....| ++.++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCcccc
Confidence 3589999999952 3333333333 24456788999999544322 223344444444456 899999999
Q ss_pred hhh
Q 026377 124 SRQ 126 (239)
Q Consensus 124 ~~~ 126 (239)
...
T Consensus 80 ~~~ 82 (294)
T cd00839 80 ADY 82 (294)
T ss_pred ccc
Confidence 853
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.57 E-value=0.00016 Score=62.63 Aligned_cols=70 Identities=19% Similarity=0.064 Sum_probs=43.2
Q ss_pred eeeecCCCCCHH------HH-HHHHHhcCCCCCCcceeccccccCCCCc--------H---HHHHHHHHhhhhCCCcEEE
Q 026377 56 VTICGDIHGQFH------DL-AELFQIGGKCPDTNYLFMGDYVDRGYYS--------V---ETVTLLVALKVRYPQRITI 117 (239)
Q Consensus 56 i~viGDIHG~~~------~L-~~ll~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~l~~~~p~~v~~ 117 (239)
++.++|+|-... .. ..+++.+.....+.+|++||++|++... . +.++.+.......+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996322 12 3345555555677899999999976521 1 2233333222222345899
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999985
No 77
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.56 E-value=0.00015 Score=61.03 Aligned_cols=71 Identities=20% Similarity=0.291 Sum_probs=55.7
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccc--cCCCCcHHH----HHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV--DRGYYSVET----VTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~ev----l~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
++++.++.|+||..+.+.+++...+....+.+|+.||+. ..|+.-... ++.+.+.. -.++.++||.|...
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~----~~v~avpGNcD~~~ 78 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELG----IPVLAVPGNCDPPE 78 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcC----CeEEEEcCCCChHH
Confidence 579999999999999999999988877788899999999 777754322 23333333 24999999999875
Q ss_pred h
Q 026377 127 I 127 (239)
Q Consensus 127 ~ 127 (239)
+
T Consensus 79 v 79 (226)
T COG2129 79 V 79 (226)
T ss_pred H
Confidence 4
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.35 E-value=0.00079 Score=57.24 Aligned_cols=67 Identities=19% Similarity=0.271 Sum_probs=42.8
Q ss_pred eeecCCCCC------HHHHHHHHHhcCCCCCCcceeccccccC--CCC-c----HHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 57 TICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDR--GYY-S----VETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 57 ~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDr--G~~-s----~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
++|||+|=. .+.|.+.|+.... ..+.++++||++|- |.+ . .+|...|..+. +...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 478999955 2334555554433 56789999999962 332 1 34555555543 34457999999999
Q ss_pred hh
Q 026377 124 SR 125 (239)
Q Consensus 124 ~~ 125 (239)
..
T Consensus 79 fl 80 (237)
T COG2908 79 FL 80 (237)
T ss_pred HH
Confidence 54
No 79
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.25 E-value=0.00067 Score=54.05 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=43.2
Q ss_pred ceeeecCCCCC------------HHHHHH-HHHhcC--CCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEc
Q 026377 55 PVTICGDIHGQ------------FHDLAE-LFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR 119 (239)
Q Consensus 55 ~i~viGDIHG~------------~~~L~~-ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lr 119 (239)
.++++||+|=. .+.... ++.... ..|.+.+++|||+.-.--...+..+.+..| |++.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 48899999843 333322 222221 245678889999986544444555555444 57899999
Q ss_pred CCcchh
Q 026377 120 GNHESR 125 (239)
Q Consensus 120 GNHE~~ 125 (239)
||||-.
T Consensus 81 GNhDk~ 86 (186)
T COG4186 81 GNHDKC 86 (186)
T ss_pred CCCCCC
Confidence 999974
No 80
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.16 E-value=0.00059 Score=58.39 Aligned_cols=66 Identities=29% Similarity=0.328 Sum_probs=45.1
Q ss_pred ceeeecCCCCCH---------HHHHHHHHhcCCCCCC-cceeccccccCCCCcH-----HHHHHHHHhhhhCCCcEEEEc
Q 026377 55 PVTICGDIHGQF---------HDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRITILR 119 (239)
Q Consensus 55 ~i~viGDIHG~~---------~~L~~ll~~~~~~~~~-~~vfLGD~vDrG~~s~-----evl~~l~~l~~~~p~~v~~lr 119 (239)
+|+.++|+||.+ ..+..+++.+.....+ .++..||+++..+.+. .+++.+..+. . .++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~-d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----Y-DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----C-CEEee
Confidence 689999999887 5566777766544444 5567999999877543 4566655543 1 24556
Q ss_pred CCcchh
Q 026377 120 GNHESR 125 (239)
Q Consensus 120 GNHE~~ 125 (239)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 81
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.16 E-value=0.00061 Score=56.63 Aligned_cols=49 Identities=18% Similarity=0.309 Sum_probs=35.4
Q ss_pred CCCCCCcceeccccccCCCCc--HHHHHHHHHhhhhCC----CcEEEEcCCcchh
Q 026377 77 GKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 125 (239)
Q Consensus 77 ~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p----~~v~~lrGNHE~~ 125 (239)
.....+-+||+||++|.|+.+ .+..+.+.+++..++ ..+++|.||||.-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 334578899999999999964 336666666654322 2588999999974
No 82
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.16 E-value=0.00074 Score=54.95 Aligned_cols=52 Identities=21% Similarity=0.210 Sum_probs=33.0
Q ss_pred hcCCCCCCcceeccccccCCCCcH--H---HHHHHHHhhhh-C----CCcEEEEcCCcchhh
Q 026377 75 IGGKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVR-Y----PQRITILRGNHESRQ 126 (239)
Q Consensus 75 ~~~~~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~l~~~-~----p~~v~~lrGNHE~~~ 126 (239)
.+.....+.+|++||++|.+.... + .+..+.++... . +..++++.||||...
T Consensus 40 ~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 40 ALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 344556788999999999887532 2 33333332111 1 335999999999864
No 83
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.97 E-value=0.00053 Score=57.97 Aligned_cols=72 Identities=17% Similarity=0.247 Sum_probs=44.2
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHH--------------------------HHHHHh
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVAL 107 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~l 107 (239)
.+|.+++|.||+.+.+.++.+.+.....|-+||+||++-....+.|-. .++..|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 469999999999999999999887777889999999986544333332 222223
Q ss_pred hhhCCCcEEEEcCCcchhh
Q 026377 108 KVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 108 ~~~~p~~v~~lrGNHE~~~ 126 (239)
. ..+--+++|+||||...
T Consensus 86 ~-~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 G-ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp H-CC-SEEEEE--TTS-SH
T ss_pred H-hcCCcEEEecCCCCchH
Confidence 2 23334899999999954
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.97 E-value=0.0016 Score=51.92 Aligned_cols=66 Identities=24% Similarity=0.365 Sum_probs=47.3
Q ss_pred eeecCCCCCHHHHHHHHHhcC--CCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 57 TICGDIHGQFHDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
.|+||+||+++.+.+-++.+. ..+-+-++++||+..-....-+ +.-...-....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 489999999999987776532 2345778899999976555533 33333444456666899999998
No 85
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.96 E-value=0.0019 Score=59.10 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=51.6
Q ss_pred CceeeecCCCCC-------------HHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhh-hhC--CCcEEE
Q 026377 54 SPVTICGDIHGQ-------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALK-VRY--PQRITI 117 (239)
Q Consensus 54 ~~i~viGDIHG~-------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~-~~~--p~~v~~ 117 (239)
|||..++|.|=- +.+|..+++.+.....+-+|+-||+.|++.-|.+++..+.+.- ... .--+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 588999999955 3455666666666667889999999999877777655544422 211 113999
Q ss_pred EcCCcchhh
Q 026377 118 LRGNHESRQ 126 (239)
Q Consensus 118 lrGNHE~~~ 126 (239)
|-||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 86
>PLN02533 probable purple acid phosphatase
Probab=96.76 E-value=0.0015 Score=60.73 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=43.8
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcH---HHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
..+++++||+|-. ......++.+.....+-++++||+++-+.... +-.+++..+....| ++.+.||||..
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~ 211 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELE 211 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCcccccc
Confidence 4579999999632 22234445444455677889999997543321 12333333434456 88999999975
No 87
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.74 E-value=0.0017 Score=56.54 Aligned_cols=66 Identities=21% Similarity=0.250 Sum_probs=42.4
Q ss_pred ceeeecCCCCCH----------------HHHHHHHHhcCCCCCCccee-ccccccCCCC-----------cHHHHHHHHH
Q 026377 55 PVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYY-----------SVETVTLLVA 106 (239)
Q Consensus 55 ~i~viGDIHG~~----------------~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~-----------s~evl~~l~~ 106 (239)
+|+.++|+||++ ..+..+++.......+.+++ .||+++..+. ...+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578999999996 33566666655444444444 8999986542 1235666655
Q ss_pred hhhhCCCcEEEEcCCcchh
Q 026377 107 LKVRYPQRITILRGNHESR 125 (239)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~ 125 (239)
+.. -++..||||.-
T Consensus 82 ~g~-----d~~~lGNHe~d 95 (277)
T cd07410 82 LGY-----DAGTLGNHEFN 95 (277)
T ss_pred cCC-----CEEeecccCcc
Confidence 542 25566999963
No 88
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.35 E-value=0.0066 Score=44.65 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=35.2
Q ss_pred CCChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 026377 8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV 52 (239)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~ 52 (239)
+-|.+.+++|++.|++++.++...+.+|+.++.++|+.+|+++++
T Consensus 51 ~it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 51 PITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp B--HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 456678999999999999999999999999999999999999864
No 89
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=96.30 E-value=0.0017 Score=60.19 Aligned_cols=115 Identities=14% Similarity=0.046 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcccc----CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHH
Q 026377 26 PLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV 101 (239)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl 101 (239)
-+...++..+++.+.+++..+|++... ..-.+.++|.||.+.++.++++.- .....-|++-|++++++....+.+
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d-P~~~K~Y~rrg~a~m~l~~~~~A~ 92 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD-PTYIKAYVRRGTAVMALGEFKKAL 92 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC-chhhheeeeccHHHHhHHHHHHHH
Confidence 356678888999999999999988654 235899999999999999888753 222345899999999999999999
Q ss_pred HHHHHhhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHh
Q 026377 102 TLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 141 (239)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~ 141 (239)
..+...+...|+...+.|++||...+-..++|..+....+
T Consensus 93 ~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 93 LDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 9999999999999999999999988777777665544444
No 90
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.25 E-value=0.0092 Score=49.57 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=41.5
Q ss_pred cCCCCCHHHHHHHHHhcC-CCCCCcceeccccccCCCCcHH-HHHHHHHhhhhC---------------------CCcEE
Q 026377 60 GDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------PQRIT 116 (239)
Q Consensus 60 GDIHG~~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~---------------------p~~v~ 116 (239)
=|++|+=.=|.+.++.+- ....+.++||||++|.|.-+-+ --+...+....+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 355677666777776543 3446778899999998764432 223333333322 13568
Q ss_pred EEcCCcchh
Q 026377 117 ILRGNHESR 125 (239)
Q Consensus 117 ~lrGNHE~~ 125 (239)
.|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999983
No 91
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.22 E-value=0.0095 Score=51.59 Aligned_cols=69 Identities=22% Similarity=0.272 Sum_probs=40.0
Q ss_pred ceeeecCCCCC--H--HHHHHHH-HhcCCCCCCcceeccccc-cCCCCc------HHHHHHHHH-hhhhCCCcEEEEcCC
Q 026377 55 PVTICGDIHGQ--F--HDLAELF-QIGGKCPDTNYLFMGDYV-DRGYYS------VETVTLLVA-LKVRYPQRITILRGN 121 (239)
Q Consensus 55 ~i~viGDIHG~--~--~~L~~ll-~~~~~~~~~~~vfLGD~v-DrG~~s------~evl~~l~~-l~~~~p~~v~~lrGN 121 (239)
+++++||.=.. . ..+...+ +.+.....+-+|++||++ +-|..+ .+.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 57899998764 1 2333333 333334567788999987 555322 122222222 222334 8999999
Q ss_pred cchh
Q 026377 122 HESR 125 (239)
Q Consensus 122 HE~~ 125 (239)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 92
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.08 E-value=0.0038 Score=54.13 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=28.0
Q ss_pred CCCCcceeccccccCCCCcHH-----HHHHHHHhhhhCC--CcEEEEcCCcch
Q 026377 79 CPDTNYLFMGDYVDRGYYSVE-----TVTLLVALKVRYP--QRITILRGNHES 124 (239)
Q Consensus 79 ~~~~~~vfLGD~vDrG~~s~e-----vl~~l~~l~~~~p--~~v~~lrGNHE~ 124 (239)
...+.+||+||++|.|..... -+..+.+.-...+ .-++.|.||||.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 356788999999999876321 1222222111111 138899999997
No 93
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.04 E-value=0.01 Score=51.20 Aligned_cols=66 Identities=23% Similarity=0.241 Sum_probs=42.1
Q ss_pred ceeeecCCCCCH----------HHHHHHHHhcCCCCCCcceeccccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEc
Q 026377 55 PVTICGDIHGQF----------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 119 (239)
Q Consensus 55 ~i~viGDIHG~~----------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lr 119 (239)
+|+.++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..+++.+..+.. .+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999974 4456666665443445566799999875532 234555544431 23 556
Q ss_pred CCcchh
Q 026377 120 GNHESR 125 (239)
Q Consensus 120 GNHE~~ 125 (239)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.91 E-value=0.019 Score=49.05 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=46.7
Q ss_pred CCceeeecCCCCCHHHHH----------------HHHH-hcCCCCCCcceeccccccCCCC-----cHHHHHHHHHhhhh
Q 026377 53 KSPVTICGDIHGQFHDLA----------------ELFQ-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVR 110 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~----------------~ll~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~~ 110 (239)
..++.|++|+|=-+.... +.+. .+.....+++|.+||+-.-.+. ..++-.++..+...
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 568999999996665433 2222 3344557889999999754333 23444444444432
Q ss_pred CCCcEEEEcCCcchhhh
Q 026377 111 YPQRITILRGNHESRQI 127 (239)
Q Consensus 111 ~p~~v~~lrGNHE~~~~ 127 (239)
.++.++||||...-
T Consensus 99 ---evi~i~GNHD~~i~ 112 (235)
T COG1407 99 ---EVIIIRGNHDNGIE 112 (235)
T ss_pred ---cEEEEeccCCCccc
Confidence 48999999998643
No 95
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.87 E-value=0.013 Score=47.91 Aligned_cols=44 Identities=27% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCCCcceeccccc--cCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 79 CPDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 79 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
.+.+.+++-||+- -|=++..+-+.++-+| |+.-+++|||||.+-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3456677799986 4556666667777555 577899999999863
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.54 E-value=0.018 Score=50.61 Aligned_cols=65 Identities=25% Similarity=0.336 Sum_probs=42.6
Q ss_pred ceeeecCCCCCHH--------------HHHHHHHhcCCCCC-CcceeccccccCCCC-c-----HHHHHHHHHhhhhCCC
Q 026377 55 PVTICGDIHGQFH--------------DLAELFQIGGKCPD-TNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYPQ 113 (239)
Q Consensus 55 ~i~viGDIHG~~~--------------~L~~ll~~~~~~~~-~~~vfLGD~vDrG~~-s-----~evl~~l~~l~~~~p~ 113 (239)
+|+.++|+||++. .+..+++....... ..++..||++...+. + ..+++.+..+...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 35666666544333 345569999976654 2 2456666666522
Q ss_pred cEEEEcCCcch
Q 026377 114 RITILRGNHES 124 (239)
Q Consensus 114 ~v~~lrGNHE~ 124 (239)
++..||||.
T Consensus 79 --a~t~GNHef 87 (288)
T cd07412 79 --ASAVGNHEF 87 (288)
T ss_pred --eeeeccccc
Confidence 466699995
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=95.21 E-value=0.026 Score=48.90 Aligned_cols=65 Identities=23% Similarity=0.175 Sum_probs=39.1
Q ss_pred ceeeecCCCCCH----------------------HHHHHHHHhcCCC-CCCcc-eeccccccCCCCc-----HHHHHHHH
Q 026377 55 PVTICGDIHGQF----------------------HDLAELFQIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (239)
Q Consensus 55 ~i~viGDIHG~~----------------------~~L~~ll~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~ 105 (239)
.|+.++|+||++ ..+..+++..... ..+.+ +..||+++..+.+ ..+++.+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467888999974 3344556655443 34444 4599999876543 24555555
Q ss_pred HhhhhCCCcEEEEcCCcchh
Q 026377 106 ALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 106 ~l~~~~p~~v~~lrGNHE~~ 125 (239)
.+. - -.+. ||||..
T Consensus 82 ~~g----~-da~~-GNHefd 95 (264)
T cd07411 82 ALG----V-DAMV-GHWEFT 95 (264)
T ss_pred hhC----C-eEEe-cccccc
Confidence 543 1 2344 999964
No 98
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.74 E-value=0.06 Score=47.15 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=40.3
Q ss_pred ceeeecCCCCCH---------------------HHHHHHHHhcCCCCCCcce-eccccccCCCC-----cHHHHHHHHHh
Q 026377 55 PVTICGDIHGQF---------------------HDLAELFQIGGKCPDTNYL-FMGDYVDRGYY-----SVETVTLLVAL 107 (239)
Q Consensus 55 ~i~viGDIHG~~---------------------~~L~~ll~~~~~~~~~~~v-fLGD~vDrG~~-----s~evl~~l~~l 107 (239)
+|+.++|+||++ ..+..+++.......+.++ -.||+++..+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 578899999874 3445566655433333344 48999987653 33455555554
Q ss_pred hhhCCCcEEEEcCCcchh
Q 026377 108 KVRYPQRITILRGNHESR 125 (239)
Q Consensus 108 ~~~~p~~v~~lrGNHE~~ 125 (239)
.. . ++..||||.-
T Consensus 82 g~----D-~~~lGNHefd 94 (281)
T cd07409 82 GY----D-AMTLGNHEFD 94 (281)
T ss_pred CC----C-EEEecccccc
Confidence 42 2 4455999974
No 99
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.55 E-value=0.041 Score=57.39 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=44.0
Q ss_pred CceeeecCCCCCH---HHHHHHHHhcCCCCCCccee-ccccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 54 SPVTICGDIHGQF---HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 54 ~~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
.+|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4799999999985 44455566554333445545 89999877644 345666655542 3669999996
No 100
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=94.51 E-value=0.063 Score=46.37 Aligned_cols=65 Identities=28% Similarity=0.233 Sum_probs=42.6
Q ss_pred ceeeecCCC----------CCHHHHHHHHHhcCCCCCC-cceeccccccCCCC-----cHHHHHHHHHhhhhCCCcEEEE
Q 026377 55 PVTICGDIH----------GQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 55 ~i~viGDIH----------G~~~~L~~ll~~~~~~~~~-~~vfLGD~vDrG~~-----s~evl~~l~~l~~~~p~~v~~l 118 (239)
+|.-+.|+| |.+..+..++++......+ -++..||+++..+. ...+++.+..+.. -+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEe
Confidence 456667777 3466777777766544444 45569999987653 2456666665542 3667
Q ss_pred cCCcch
Q 026377 119 RGNHES 124 (239)
Q Consensus 119 rGNHE~ 124 (239)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899996
No 101
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=94.44 E-value=0.069 Score=46.58 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=49.3
Q ss_pred CceeeecCCCCC--HHHHHHHHHhcCCCC-CCcceeccccccCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 54 SPVTICGDIHGQ--FHDLAELFQIGGKCP-DTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 54 ~~i~viGDIHG~--~~~L~~ll~~~~~~~-~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
|+|.++|||=|. ...+...|..+.... .+-+|..||....| .-+.++.+.|.+.... ++.+ |||+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhc
Confidence 689999999999 577777877665443 35555689998766 4577888888877643 5555 99987
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.41 E-value=0.058 Score=47.27 Aligned_cols=73 Identities=23% Similarity=0.279 Sum_probs=42.3
Q ss_pred ceeeecCCCCC--HHHHHHHHHhcCCC--CCCcceeccccccCCCCcH--H------HHHHHHHhhhhCCC-cEEEEcCC
Q 026377 55 PVTICGDIHGQ--FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRGN 121 (239)
Q Consensus 55 ~i~viGDIHG~--~~~L~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~--e------vl~~l~~l~~~~p~-~v~~lrGN 121 (239)
+..-.|+-.-+ ...+..+++.+... +.+-+|+.||+++.+.... + .-.+...++..+|. .++.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34455666422 34556666655443 5677889999998876421 1 11122223322222 48999999
Q ss_pred cchhhh
Q 026377 122 HESRQI 127 (239)
Q Consensus 122 HE~~~~ 127 (239)
||..-.
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 103
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=94.11 E-value=0.043 Score=52.67 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=35.3
Q ss_pred CCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 81 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
.+.+-.+||+.||||.+-.+++.|+... +|=+-.||||-.-
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlW 225 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILW 225 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHH
Confidence 4677789999999999999999998654 5788999999853
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.10 E-value=0.14 Score=46.25 Aligned_cols=73 Identities=21% Similarity=0.343 Sum_probs=48.1
Q ss_pred CceeeecCCCCCHHHHHH---HHHhcCCCCCCcceecccccc-CCC---CcHHH---HHHHHH------hhhhCCCcEEE
Q 026377 54 SPVTICGDIHGQFHDLAE---LFQIGGKCPDTNYLFMGDYVD-RGY---YSVET---VTLLVA------LKVRYPQRITI 117 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~---ll~~~~~~~~~~~vfLGD~vD-rG~---~s~ev---l~~l~~------l~~~~p~~v~~ 117 (239)
|||.|=|=-||.++.+-+ +.++.+..+.+.++++||+=. |.. +++.| ...+.. -....|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999874 455666778888999999842 211 22222 111111 11235545678
Q ss_pred EcCCcchhh
Q 026377 118 LRGNHESRQ 126 (239)
Q Consensus 118 lrGNHE~~~ 126 (239)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999964
No 105
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=93.32 E-value=0.16 Score=45.63 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=41.7
Q ss_pred CceeeecCCCCCHH-----------------HHH--HHH-HhcCCCCCCcceeccccccCCCCcHHH---HHHHHHhhhh
Q 026377 54 SPVTICGDIHGQFH-----------------DLA--ELF-QIGGKCPDTNYLFMGDYVDRGYYSVET---VTLLVALKVR 110 (239)
Q Consensus 54 ~~i~viGDIHG~~~-----------------~L~--~ll-~~~~~~~~~~~vfLGD~vDrG~~s~ev---l~~l~~l~~~ 110 (239)
-+|+.+.|+|=... ++. +.+ +.+.....+.+||+||.|+. ...... +....+-.+.
T Consensus 54 fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~ 132 (379)
T KOG1432|consen 54 FKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAID 132 (379)
T ss_pred eEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhh
Confidence 47999999995443 221 112 22344557889999999986 443333 3333322222
Q ss_pred CCCcEEEEcCCcchh
Q 026377 111 YPQRITILRGNHESR 125 (239)
Q Consensus 111 ~p~~v~~lrGNHE~~ 125 (239)
+.--...+.||||+.
T Consensus 133 ~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 133 RKIPWAAVLGNHDDE 147 (379)
T ss_pred cCCCeEEEecccccc
Confidence 221256899999985
No 106
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=93.26 E-value=0.092 Score=46.10 Aligned_cols=66 Identities=18% Similarity=0.076 Sum_probs=37.9
Q ss_pred ceeeecCCCCCHHH----------HHHHHHhcCC-----CCCCcceeccccccCCCC-----cHHHHHHHHHhhhhCCCc
Q 026377 55 PVTICGDIHGQFHD----------LAELFQIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQR 114 (239)
Q Consensus 55 ~i~viGDIHG~~~~----------L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~~~p~~ 114 (239)
.|+.++|+||++.. +..+++.... .+..-++-.||.+...+. ..-+++.+..+...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47889999998533 3445544332 222334449999843332 23345566555522
Q ss_pred EEEEcCCcchh
Q 026377 115 ITILRGNHESR 125 (239)
Q Consensus 115 v~~lrGNHE~~ 125 (239)
....||||.-
T Consensus 78 -a~~~GNHEfD 87 (285)
T cd07405 78 -AMAVGNHEFD 87 (285)
T ss_pred -EEeecccccc
Confidence 4455999973
No 107
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.29 E-value=0.26 Score=45.43 Aligned_cols=72 Identities=19% Similarity=0.415 Sum_probs=45.2
Q ss_pred CCceeeecCCC--CC---------HHH------HHHHHHhcC-CCCCCcceeccccccCCCCc--HHHHHHHHHhhhhCC
Q 026377 53 KSPVTICGDIH--GQ---------FHD------LAELFQIGG-KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP 112 (239)
Q Consensus 53 ~~~i~viGDIH--G~---------~~~------L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p 112 (239)
..++..|+|-| |+ ++. |.+.+...- ...++-++||||++|-|... -|--+...+++..+|
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~ 127 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFG 127 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhC
Confidence 45799999976 31 111 222333222 23456677899999988754 344555555555555
Q ss_pred C----cEEEEcCCcch
Q 026377 113 Q----RITILRGNHES 124 (239)
Q Consensus 113 ~----~v~~lrGNHE~ 124 (239)
. .+..+.||||-
T Consensus 128 ~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 128 RKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCCeeEEeCCcccc
Confidence 4 67899999997
No 108
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=92.27 E-value=0.2 Score=44.66 Aligned_cols=65 Identities=25% Similarity=0.231 Sum_probs=41.3
Q ss_pred ceeeecCCCCCHH------HHHHHHHhcCC-----CCCCcceeccccccCCCC-------------cHHHHHHHHHhhhh
Q 026377 55 PVTICGDIHGQFH------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 110 (239)
Q Consensus 55 ~i~viGDIHG~~~------~L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~l~~~ 110 (239)
.|+-+.|+||++. .+..+++.... .+...++..||.+..++. ...+++++-.+..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 4778899999953 44444554322 233345569999875442 3455667766653
Q ss_pred CCCcEEEEcCCcch
Q 026377 111 YPQRITILRGNHES 124 (239)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (239)
-.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 3678999996
No 109
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=92.11 E-value=0.17 Score=48.09 Aligned_cols=70 Identities=30% Similarity=0.319 Sum_probs=46.0
Q ss_pred cCCceeeecCCCCCHH------------HH---HHHHHhcCCCCCCccee-ccccccCCC------CcHHHHHHHHHhhh
Q 026377 52 VKSPVTICGDIHGQFH------------DL---AELFQIGGKCPDTNYLF-MGDYVDRGY------YSVETVTLLVALKV 109 (239)
Q Consensus 52 ~~~~i~viGDIHG~~~------------~L---~~ll~~~~~~~~~~~vf-LGD~vDrG~------~s~evl~~l~~l~~ 109 (239)
.+.+|+-+.|+||++. .+ ..+++.........+++ .||+++..+ .....++.+-.++-
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3568999999999998 33 33444433333344444 999999843 33446777776662
Q ss_pred hCCCcEEEEcCCcchhh
Q 026377 110 RYPQRITILRGNHESRQ 126 (239)
Q Consensus 110 ~~p~~v~~lrGNHE~~~ 126 (239)
=..-.||||.-.
T Consensus 105 -----Da~tiGNHEFd~ 116 (517)
T COG0737 105 -----DAMTLGNHEFDY 116 (517)
T ss_pred -----cEEeeccccccc
Confidence 368889999843
No 110
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=91.90 E-value=0.34 Score=41.98 Aligned_cols=65 Identities=20% Similarity=0.186 Sum_probs=45.4
Q ss_pred ceeeecCCCCCHH--HHHHHHHhcCCC-CCCcceeccccccCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 55 PVTICGDIHGQFH--DLAELFQIGGKC-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 55 ~i~viGDIHG~~~--~L~~ll~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
||.+||||-|... .+...+..+... +.+-+|..||....| .-+.++.+.|..+... +..+ ||||.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~f 69 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTW 69 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-ccccc
Confidence 5889999999964 446666655433 234455689988766 3677888888887643 4444 99985
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=91.00 E-value=0.25 Score=43.38 Aligned_cols=67 Identities=19% Similarity=0.113 Sum_probs=39.6
Q ss_pred CceeeecCCCCCHH-------------HHHHHHHhc----CCCCCC-cceeccccccCCCCc-------HHHHHHHHHhh
Q 026377 54 SPVTICGDIHGQFH-------------DLAELFQIG----GKCPDT-NYLFMGDYVDRGYYS-------VETVTLLVALK 108 (239)
Q Consensus 54 ~~i~viGDIHG~~~-------------~L~~ll~~~----~~~~~~-~~vfLGD~vDrG~~s-------~evl~~l~~l~ 108 (239)
-+|+.+.|+||++. .+.++.+.+ ...... -++-.||.++.-+.+ .-+++++-.+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 46889999999863 123333222 222223 344599999764332 33456665554
Q ss_pred hhCCCcEEEEcCCcchh
Q 026377 109 VRYPQRITILRGNHESR 125 (239)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (239)
--.+..||||.-
T Consensus 86 -----yDa~tlGNHEFd 97 (282)
T cd07407 86 -----YDLLTIGNHELY 97 (282)
T ss_pred -----CcEEeecccccC
Confidence 237889999983
No 112
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.81 E-value=0.3 Score=40.46 Aligned_cols=72 Identities=11% Similarity=0.178 Sum_probs=40.1
Q ss_pred eeeecCCCCC-----HHHHHHHHHhcC-CCCCCcceeccccccCCCCcH----------HHHHHHHHhhh---h--CCCc
Q 026377 56 VTICGDIHGQ-----FHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKV---R--YPQR 114 (239)
Q Consensus 56 i~viGDIHG~-----~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~l~~---~--~p~~ 114 (239)
|++++|+|=. ++.|.+++..+. ....+.+|++|+++|.-.... .....+..+.. . .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677777765 566777888777 666788999999999622111 11112222111 1 1137
Q ss_pred EEEEcCCcchhhh
Q 026377 115 ITILRGNHESRQI 127 (239)
Q Consensus 115 v~~lrGNHE~~~~ 127 (239)
++++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 8999999998644
No 113
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=90.26 E-value=0.36 Score=47.40 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=44.8
Q ss_pred ccCCceeeecCCCCCHHH----------------HHHHHHhcCCC-CCCcceeccccccCCCCcH-------------HH
Q 026377 51 PVKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYSV-------------ET 100 (239)
Q Consensus 51 ~~~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~-------------ev 100 (239)
....+|+...|+||++.. +..+++..... ++..+|-.||.+...|.+- -+
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 346689999999999643 33455544322 3334555999998655421 25
Q ss_pred HHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 101 VTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 101 l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
++.+-.+. --....||||.-
T Consensus 103 i~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 103 YKAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHHhcC-----CcEEeccchhhh
Confidence 66666665 237889999963
No 114
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=90.25 E-value=0.33 Score=47.45 Aligned_cols=66 Identities=20% Similarity=0.146 Sum_probs=41.4
Q ss_pred CceeeecCCCCCHHH----------------HHHHHHhcCCC-CCCcceeccccccCCCCc-------------HHHHHH
Q 026377 54 SPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 103 (239)
Q Consensus 54 ~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~ 103 (239)
-+|+-..|+||++.. +..+++..... +...+|-.||.+...+.+ .-+++.
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 478899999999643 34455544322 233344599999855432 225566
Q ss_pred HHHhhhhCCCcEEEEcCCcch
Q 026377 104 LVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 104 l~~l~~~~p~~v~~lrGNHE~ 124 (239)
+-.+.. -....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 655542 3678899996
No 115
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.81 E-value=0.36 Score=50.54 Aligned_cols=67 Identities=24% Similarity=0.271 Sum_probs=42.2
Q ss_pred CCceeeecCCCCCHH----------------HHHHHHHhcCCCCCCccee-ccccccCCCC--------------cHHHH
Q 026377 53 KSPVTICGDIHGQFH----------------DLAELFQIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (239)
Q Consensus 53 ~~~i~viGDIHG~~~----------------~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~--------------s~evl 101 (239)
..+|+.++|+||++. .+..+++.........+++ .||.+...+- ..-++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 457999999999863 3344555543333344555 9999986551 22355
Q ss_pred HHHHHhhhhCCCcEEEEcCCcch
Q 026377 102 TLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
..+-.+. .-....||||.
T Consensus 121 ~~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHHhhcC-----ccEEeeccccc
Confidence 5555554 23677999996
No 116
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=88.16 E-value=0.53 Score=43.87 Aligned_cols=73 Identities=19% Similarity=0.193 Sum_probs=41.4
Q ss_pred cCCceeeecCCCCCHHHHHHHHHhcCCCC-CCcceecccccc-CCCCc---HHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 026377 52 VKSPVTICGDIHGQFHDLAELFQIGGKCP-DTNYLFMGDYVD-RGYYS---VETVTLLVALKVRYPQRITILRGNHESRQ 126 (239)
Q Consensus 52 ~~~~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~vfLGD~vD-rG~~s---~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (239)
...++.|+||+= +...-...+......+ .+-++++||+.- .+..+ -+-..++.-+...-| ..+.-||||.-.
T Consensus 146 ~~~~~~i~GDlG-~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 146 SPTRAAIFGDMG-CTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred CceeEEEEcccc-ccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 356899999984 4333322333322333 567888999872 22222 223333333444445 578899999865
Q ss_pred h
Q 026377 127 I 127 (239)
Q Consensus 127 ~ 127 (239)
.
T Consensus 223 ~ 223 (452)
T KOG1378|consen 223 P 223 (452)
T ss_pred C
Confidence 4
No 117
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=87.39 E-value=0.99 Score=43.41 Aligned_cols=66 Identities=20% Similarity=0.159 Sum_probs=39.9
Q ss_pred ceeeecCCCCCHHH---------------------HHHHHHhcCC-CCCCcceeccccccCCCCc-----HHHHHHHHHh
Q 026377 55 PVTICGDIHGQFHD---------------------LAELFQIGGK-CPDTNYLFMGDYVDRGYYS-----VETVTLLVAL 107 (239)
Q Consensus 55 ~i~viGDIHG~~~~---------------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l 107 (239)
.|+-+.|+||++.. +..++++... .+...++..||.+...+.+ ...++.+-.+
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 46778888887533 3344554432 2334455699998765432 3345655555
Q ss_pred hhhCCCcEEEEcCCcchh
Q 026377 108 KVRYPQRITILRGNHESR 125 (239)
Q Consensus 108 ~~~~p~~v~~lrGNHE~~ 125 (239)
.. -....||||.-
T Consensus 82 g~-----Da~~lGNHEFd 94 (550)
T TIGR01530 82 GF-----DFFTLGNHEFD 94 (550)
T ss_pred CC-----CEEEecccccc
Confidence 42 37889999973
No 118
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.98 E-value=0.82 Score=45.99 Aligned_cols=68 Identities=22% Similarity=0.175 Sum_probs=42.4
Q ss_pred CCceeeecCCCCCHHH----------------HHHHHHhcCCC-CCCcceeccccccCCCCc--------------HHHH
Q 026377 53 KSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 101 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s--------------~evl 101 (239)
+.+|+-+.|+||++.. +..+++..... ++..+|-.||++..-|.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4579999999999642 23344443322 233455599999754432 1256
Q ss_pred HHHHHhhhhCCCcEEEEcCCcchh
Q 026377 102 TLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+.+-.+.- -....||||.-
T Consensus 195 ~amN~LGy-----DA~tLGNHEFD 213 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEFN 213 (814)
T ss_pred HHHhccCC-----CEEEechhhcc
Confidence 66666652 36888999973
No 119
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.86 E-value=1.8 Score=40.43 Aligned_cols=69 Identities=22% Similarity=0.384 Sum_probs=51.1
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCC--CCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCc
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 122 (239)
..+|.|+||.-|+++.|.+-.+.+.. .|-+.++++||+.+....+-|++.+....+ ..|--+|++-+|.
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 46999999999999999887776543 335778899999997667778877765543 3454466666655
No 120
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=85.78 E-value=0.53 Score=43.91 Aligned_cols=39 Identities=28% Similarity=0.486 Sum_probs=32.4
Q ss_pred CcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 82 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+.+=.+||+.||||++-.+++.|.... .+-+-.||||..
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDil 230 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDIL 230 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceE
Confidence 445579999999999999999998764 467889999973
No 121
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=85.73 E-value=1.2 Score=41.12 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=42.7
Q ss_pred ccCCceeeecCCC-CCHHHH--HHHHHhcC-CCCCCcceeccccccCCCCcH------HHHHHHHHhh---hhCCCcEEE
Q 026377 51 PVKSPVTICGDIH-GQFHDL--AELFQIGG-KCPDTNYLFMGDYVDRGYYSV------ETVTLLVALK---VRYPQRITI 117 (239)
Q Consensus 51 ~~~~~i~viGDIH-G~~~~L--~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~------evl~~l~~l~---~~~p~~v~~ 117 (239)
.-..+++++||-= |.+... .+.|..++ ..+.+-+|-+||-++.|..++ +..+.+..-. ..-| .++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~P--wy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIP--FFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCC--eEE
Confidence 3455899999953 333322 22333332 344556667999878787653 3344444322 1223 899
Q ss_pred EcCCcch
Q 026377 118 LRGNHES 124 (239)
Q Consensus 118 lrGNHE~ 124 (239)
++||||.
T Consensus 102 vLGNHDy 108 (394)
T PTZ00422 102 VLGQADW 108 (394)
T ss_pred eCCcccc
Confidence 9999997
No 122
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=85.59 E-value=9.5 Score=31.59 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=62.4
Q ss_pred CcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhhCch----------------HHHHHHhCChh
Q 026377 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY----------------DECLRKYGNAN 145 (239)
Q Consensus 82 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~----------------~e~~~~~~~~~ 145 (239)
..+|++| -|-+.-|++.++..++..|-.+- ++.|+-|.|..++...|. +|..++| ...
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~-yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRS-YIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceE-EEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 4578887 58889999999999998887764 458999999877655443 2233333 234
Q ss_pred HHHHHHHHHhhcCceEEEcCcEEEEcC
Q 026377 146 IWKIFTDLFDYFPLTALVESEIFCLHG 172 (239)
Q Consensus 146 ~~~~~~~~~~~LP~~~~i~~~~l~vHg 172 (239)
++..+...+.++++...+...++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 666777888888888887778888877
No 123
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=84.75 E-value=2.3 Score=37.53 Aligned_cols=73 Identities=15% Similarity=0.306 Sum_probs=48.1
Q ss_pred CCceeeecCCCCC----HHHHHHHHHhcC-CCC----CCcceeccccccCC----CCc----HHHHHHHHHh-hhhCC--
Q 026377 53 KSPVTICGDIHGQ----FHDLAELFQIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYP-- 112 (239)
Q Consensus 53 ~~~i~viGDIHG~----~~~L~~ll~~~~-~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~l-~~~~p-- 112 (239)
..+++|+||+|=+ +++|.++|+... ..+ ...+||.|+++-+. ..+ .+-.+-|..+ ...||
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 4579999999955 677777887663 222 45689999998652 222 2334444442 33445
Q ss_pred ---CcEEEEcCCcchh
Q 026377 113 ---QRITILRGNHESR 125 (239)
Q Consensus 113 ---~~v~~lrGNHE~~ 125 (239)
.++++|.|-.|-+
T Consensus 107 ~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 107 LEHCYLIFIPGINDPC 122 (291)
T ss_pred HhcCeEEEECCCCCCC
Confidence 4889999999974
No 124
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=84.57 E-value=1.3 Score=35.31 Aligned_cols=62 Identities=24% Similarity=0.309 Sum_probs=43.7
Q ss_pred ceeeecCCCC--CHHHHHHHHHhcCCCC-CCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 55 PVTICGDIHG--QFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 55 ~i~viGDIHG--~~~~L~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
-+.++||+|= ...+|-.-++++--++ -..++++|++.- .|++++|..+. +.++++||--|.-
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlcs-----~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLCS-----KESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcch-----HHHHHHHHhhC----CCcEEEecccCcc
Confidence 3678999994 2344544454443343 366889999764 59999998876 4699999988774
No 125
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=82.50 E-value=2.9 Score=36.31 Aligned_cols=70 Identities=16% Similarity=0.277 Sum_probs=38.3
Q ss_pred eeeecCCC-CCH----HHHHHHHHhc-CCC----------CCCcceeccccccCCCCc------------------HHHH
Q 026377 56 VTICGDIH-GQF----HDLAELFQIG-GKC----------PDTNYLFMGDYVDRGYYS------------------VETV 101 (239)
Q Consensus 56 i~viGDIH-G~~----~~L~~ll~~~-~~~----------~~~~~vfLGD~vDrG~~s------------------~evl 101 (239)
|++|+||| |.- ..++.+.+-+ |.. .-.++|+.||.|+.-... .+-+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998 432 3333333321 221 113588999999854321 1212
Q ss_pred ----HHHHHhhhhCCCcEEEEcCCcchhhh
Q 026377 102 ----TLLVALKVRYPQRITILRGNHESRQI 127 (239)
Q Consensus 102 ----~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (239)
.+|.++...- .|.++.||||-...
T Consensus 82 ~~ld~~l~~l~~~i--~V~imPG~~Dp~~~ 109 (257)
T cd07387 82 KELDNFLSQLASSV--PVDLMPGEFDPANH 109 (257)
T ss_pred HHHHHHHHhhhcCC--eEEECCCCCCcccc
Confidence 2333333222 38899999998643
No 126
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.37 E-value=1.6 Score=43.81 Aligned_cols=68 Identities=22% Similarity=0.180 Sum_probs=41.5
Q ss_pred cCCceeeecCCCCCHHH----------------HHHHHHhcCCC-CCCcceeccccccCCCC------------------
Q 026377 52 VKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYY------------------ 96 (239)
Q Consensus 52 ~~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vfLGD~vDrG~~------------------ 96 (239)
...+|+-..|+||++.. +..+++..... +...+|-.||++..-+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 35689999999999632 23344444322 23345559998853322
Q ss_pred -cHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 97 -SVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 97 -s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
..-+++.+-.+.. -....||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 1235666665552 3688999996
No 127
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=81.33 E-value=3.7 Score=39.26 Aligned_cols=54 Identities=19% Similarity=0.194 Sum_probs=40.9
Q ss_pred CCceeeecCCCCC------------HHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHH
Q 026377 53 KSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (239)
Q Consensus 53 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (239)
-.||.|-.|+|=- +..|..+|..+.....+.+++-||++.-..-|..+|-.+.+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 4589999999943 56788888888777778888899999877777665544443
No 128
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=80.96 E-value=1.6 Score=41.87 Aligned_cols=68 Identities=22% Similarity=0.137 Sum_probs=39.7
Q ss_pred CCceeeecCCCCCHH-------HH---HHHHHhcC-----CCCCCcceeccccccCCCCc-----HHHHHHHHHhhhhCC
Q 026377 53 KSPVTICGDIHGQFH-------DL---AELFQIGG-----KCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYP 112 (239)
Q Consensus 53 ~~~i~viGDIHG~~~-------~L---~~ll~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p 112 (239)
...|+.+.|+||++. .+ ..+++... ..++.-++..||++...+.+ .-+++++-.+..
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~--- 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY--- 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC---
Confidence 457999999999874 22 33444332 12334455699998643322 234555555542
Q ss_pred CcEEEEcCCcchh
Q 026377 113 QRITILRGNHESR 125 (239)
Q Consensus 113 ~~v~~lrGNHE~~ 125 (239)
. +...||||.-
T Consensus 111 -D-a~tlGNHEFD 121 (551)
T PRK09558 111 -D-AMAVGNHEFD 121 (551)
T ss_pred -C-EEcccccccC
Confidence 2 4455999973
No 129
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=76.44 E-value=8.1 Score=36.42 Aligned_cols=73 Identities=26% Similarity=0.352 Sum_probs=41.1
Q ss_pred ceeeecCCCC-CHHHH----HHHHHhcCCC----CCCcce-eccccccC-CC-----------CcHHHHHHHHHhhhhCC
Q 026377 55 PVTICGDIHG-QFHDL----AELFQIGGKC----PDTNYL-FMGDYVDR-GY-----------YSVETVTLLVALKVRYP 112 (239)
Q Consensus 55 ~i~viGDIHG-~~~~L----~~ll~~~~~~----~~~~~v-fLGD~vDr-G~-----------~s~evl~~l~~l~~~~p 112 (239)
.+++++|+|= ...-+ ...++-+.-+ +..+|+ ..||.||. |- +..+-.+.+..+-..-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5899999994 33333 3333333222 123444 68999994 21 22233344444333344
Q ss_pred C--cEEEEcCCcchhhh
Q 026377 113 Q--RITILRGNHESRQI 127 (239)
Q Consensus 113 ~--~v~~lrGNHE~~~~ 127 (239)
. .+++.+||||..-.
T Consensus 307 ~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred CCceEEEecCCCCcccc
Confidence 4 57899999998643
No 130
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=75.06 E-value=3 Score=36.52 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=41.0
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCC-cEEEEcCCcchhh
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQ 126 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~ 126 (239)
..+.++|+|.|+...+.. ..+..|.++-+||+..-|- +-||..+=..+ -..|. +-+.|+||||...
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 458999999998765443 2344455677999876543 33554443322 12232 3478999999854
No 131
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=73.34 E-value=2.6 Score=36.98 Aligned_cols=69 Identities=26% Similarity=0.299 Sum_probs=41.1
Q ss_pred CCceeeecCC--CCCHHHHHHHHH--hcCCCC-CCcceecccc-ccCCCCcHH------HHHHHH---HhhhhCCCcEEE
Q 026377 53 KSPVTICGDI--HGQFHDLAELFQ--IGGKCP-DTNYLFMGDY-VDRGYYSVE------TVTLLV---ALKVRYPQRITI 117 (239)
Q Consensus 53 ~~~i~viGDI--HG~~~~L~~ll~--~~~~~~-~~~~vfLGD~-vDrG~~s~e------vl~~l~---~l~~~~p~~v~~ 117 (239)
+.++.||||- +|.+..-+..+. .++..- .+-+|=+||= -|-|..+.. ..+-+. +|.+ | .+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk--p--Wy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK--P--WYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc--c--hhh
Confidence 4589999995 777766655544 233322 3445569994 467765421 222222 2222 3 689
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
|.||||.+
T Consensus 119 vlGNHDyr 126 (336)
T KOG2679|consen 119 VLGNHDYR 126 (336)
T ss_pred hccCcccc
Confidence 99999985
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=68.12 E-value=4.8 Score=39.10 Aligned_cols=25 Identities=20% Similarity=0.526 Sum_probs=22.0
Q ss_pred cCCceeeecCCCCCHHHHHHHHHhc
Q 026377 52 VKSPVTICGDIHGQFHDLAELFQIG 76 (239)
Q Consensus 52 ~~~~i~viGDIHG~~~~L~~ll~~~ 76 (239)
.++.-.+++||||.+++|..+|+..
T Consensus 31 PKGTEhF~SDlHGEyeAF~HiLrn~ 55 (640)
T PF06874_consen 31 PKGTEHFMSDLHGEYEAFDHILRNG 55 (640)
T ss_pred CCCceEeeeccccchHHHHHHHHcC
Confidence 3678899999999999999999853
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=45.98 E-value=22 Score=25.01 Aligned_cols=69 Identities=12% Similarity=0.059 Sum_probs=44.6
Q ss_pred CceeeecCCCCCHHHHHHHHHhcCC--CCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCc
Q 026377 54 SPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (239)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 122 (239)
..+.||=|---|.+++.++++.+.. +....++.+|+.-|.|....+....+..+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3567788877788888888876643 34455667999999888887766666666655555544444443
No 134
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=43.12 E-value=26 Score=30.16 Aligned_cols=88 Identities=25% Similarity=0.362 Sum_probs=44.9
Q ss_pred CCcceeccccc-cCCCC---cHHHHHHHHHhhh-------hCCCcEEEEcCCcchhhhhhhhCchHHHHHHh--CChhHH
Q 026377 81 DTNYLFMGDYV-DRGYY---SVETVTLLVALKV-------RYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIW 147 (239)
Q Consensus 81 ~~~~vfLGD~v-DrG~~---s~evl~~l~~l~~-------~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~--~~~~~~ 147 (239)
.+..+||||-. ||-.. ..=+|.+|.++.. +-.++|++|-||||.-.. |.+....... ...+.|
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n----gny~arlanhkls~gDTY 160 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN----GNYMARLANHKLSAGDTY 160 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC----chHHHHHhhCCCCccchh
Confidence 35578888865 44211 1224445544432 123589999999998432 1122222222 112233
Q ss_pred HHHHHHHhhcCceEEE-cCcEEEEcCCCCC
Q 026377 148 KIFTDLFDYFPLTALV-ESEIFCLHGGLSP 176 (239)
Q Consensus 148 ~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~ 176 (239)
.....+|+..-- ..+++..|-||-.
T Consensus 161 ----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 161 ----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ----hccccccccccCcchhhhhcccCcee
Confidence 334556654331 2367888888743
No 135
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=43.09 E-value=12 Score=35.32 Aligned_cols=24 Identities=21% Similarity=0.563 Sum_probs=20.7
Q ss_pred CCceeeecCCCCCHHHHHHHHHhc
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIG 76 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~ 76 (239)
++.=-+++|+||.|+++..+|+..
T Consensus 37 KgTEHF~SDvHGEYeaF~hVLrNg 60 (648)
T COG3855 37 KGTEHFMSDVHGEYEAFNHVLRNG 60 (648)
T ss_pred cchhhhhhhhhchHHHHHHHHHcC
Confidence 566788999999999999999853
No 136
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=42.97 E-value=59 Score=28.20 Aligned_cols=66 Identities=17% Similarity=0.141 Sum_probs=41.8
Q ss_pred CceeeecCCCCCH--HHHHHHHHhcCCC-CCCcceeccccccCCCC-cHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 026377 54 SPVTICGDIHGQF--HDLAELFQIGGKC-PDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 124 (239)
Q Consensus 54 ~~i~viGDIHG~~--~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (239)
||+.++||+-|.. ..+...|..+... ..+-+|..|.-...|.. +.+....+++... -++=.|||--
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~-----dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGA-----DVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCC-----CEEecccccc
Confidence 5899999999985 3444445444322 23455667777766655 4556666666553 2677899954
No 137
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=41.19 E-value=1.2e+02 Score=24.14 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=37.4
Q ss_pred eeecCCCCCHHHHHHHHH-hcCC------------CCCCcceeccccccCCCCcHHHHHHHHHhh
Q 026377 57 TICGDIHGQFHDLAELFQ-IGGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVALK 108 (239)
Q Consensus 57 ~viGDIHG~~~~L~~ll~-~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~ 108 (239)
++.+=.+||-..+.+.+. .++. .+.-.+||+|=.+|+|.-+-++.++|..++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 445556777766655443 2222 234679999999999999999999999876
No 138
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=39.34 E-value=76 Score=29.58 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=47.1
Q ss_pred CceeeecCCCC-CHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhC-CCcEEEEcC
Q 026377 54 SPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 120 (239)
Q Consensus 54 ~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~-p~~v~~lrG 120 (239)
..+.+|=|-|+ +.+.+.++|+.+...+..+++.+||+...|+.+.+.-..+.+..... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788999665 58889888887655444578889999999999988776665544333 3445444 6
No 139
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=37.52 E-value=64 Score=31.32 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCCC--CCcceeccccc--cCCCCcHH----HHHHHHHhh-hhCCC-cEEEEcCCcchhhhh
Q 026377 68 DLAELFQIGGKCP--DTNYLFMGDYV--DRGYYSVE----TVTLLVALK-VRYPQ-RITILRGNHESRQIT 128 (239)
Q Consensus 68 ~L~~ll~~~~~~~--~~~~vfLGD~v--DrG~~s~e----vl~~l~~l~-~~~p~-~v~~lrGNHE~~~~~ 128 (239)
.+..+|+.++... .|-++-.||.+ |+++.+.+ ++..+.++. .-+|+ -|+...||||-.-.+
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 3455565554433 34455699999 45665543 233333322 23554 578999999986554
No 140
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=37.50 E-value=2.1e+02 Score=23.42 Aligned_cols=77 Identities=22% Similarity=0.257 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCCCHHHHHHHHHhcCCC--------------------------
Q 026377 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKC-------------------------- 79 (239)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~-------------------------- 79 (239)
.++++++.+-+.+..+.+.++-.= ...++||=++|++--+-.+++.+..+
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 578999999888888777665432 57889999999998777777655432
Q ss_pred -----CCCcceeccccccCCCCcHHHHHHHHH
Q 026377 80 -----PDTNYLFMGDYVDRGYYSVETVTLLVA 106 (239)
Q Consensus 80 -----~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (239)
....++++=|++|-|--=..+.++|..
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l~~ 118 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKE 118 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHHHh
Confidence 124588899999998766666666653
No 141
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=37.36 E-value=31 Score=29.86 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=26.9
Q ss_pred cceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+++|+||+|++.- -.-+...|.+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4789999998733 2356677888888777554444 55553
No 142
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=37.07 E-value=1.2e+02 Score=21.78 Aligned_cols=90 Identities=17% Similarity=0.101 Sum_probs=46.5
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCc-----eeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccccCCCC
Q 026377 22 MQCKPLSEPQVKALCEKAKEILMEESNVQPVKSP-----VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY 96 (239)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~-----i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~ 96 (239)
.....++.+++.+++++.. ...++++..+ -.+-|=+|=-+..+...+..+...+...+|+. +..|..
T Consensus 7 ~~~~~i~~~~l~~~~~~~~-----~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~r 78 (109)
T cd01533 7 RHTPSVSADELAALQARGA-----PLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTR 78 (109)
T ss_pred ccCCcCCHHHHHHHHhcCC-----CcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCch
Confidence 3344567777666654311 1234554321 22334344455666665665554444556654 456777
Q ss_pred cHHHHHHHHHhhhhCCCcEEEEcCC
Q 026377 97 SVETVTLLVALKVRYPQRITILRGN 121 (239)
Q Consensus 97 s~evl~~l~~l~~~~p~~v~~lrGN 121 (239)
|......|..+. +++.++.|.|=
T Consensus 79 s~~a~~~L~~~G--~~~~v~~l~gG 101 (109)
T cd01533 79 SIIGAQSLINAG--LPNPVAALRNG 101 (109)
T ss_pred HHHHHHHHHHCC--CCcceeEecCC
Confidence 766666666554 33226666663
No 143
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.42 E-value=1.1e+02 Score=23.55 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcCCCCCCcceeccccccCCCCc-----HHHHHHHHHhhhhCCCcEEEE---cCCcchh
Q 026377 66 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITIL---RGNHESR 125 (239)
Q Consensus 66 ~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l---rGNHE~~ 125 (239)
++.|+..++..+....--++|+|+-.|++-+| +...-.+.+--..+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888888776665566899999886554 333333333222467766554 5887775
No 144
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=33.93 E-value=1.2e+02 Score=27.78 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=45.6
Q ss_pred CCceeeecCCC-CCHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 026377 53 KSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (239)
Q Consensus 53 ~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (239)
...+.+|=|-+ .+.+++.++|+.+...+...++.+|+.-.-|..+.+.-..+.+....+.-..+++-|.+.
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~g~~~ 366 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEEA 366 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEECHHH
Confidence 34578888855 488999999987764334567789999887888776555554444333312344456443
No 145
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=33.48 E-value=25 Score=30.70 Aligned_cols=39 Identities=26% Similarity=0.445 Sum_probs=25.4
Q ss_pred cceeccccccCCCCcHH-HHHHHHHhhhhCCCcEEEEcCCcchh
Q 026377 83 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYPQRITILRGNHESR 125 (239)
Q Consensus 83 ~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (239)
+++|+||+|.+ ...+ +-..|-+++..++.. ++-.|-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D--~vIaNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQAD--LVIANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCC--EEEEcCccc
Confidence 57899999955 2223 346677788777744 444566665
No 146
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=32.18 E-value=50 Score=28.62 Aligned_cols=38 Identities=29% Similarity=0.416 Sum_probs=26.7
Q ss_pred cceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCC
Q 026377 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 121 (239)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGN 121 (239)
+++|+||+|++ +.-.-+-+.|-.+|..|.-.++++-|+
T Consensus 2 riLfiGDvvGk-~Gr~~v~~~Lp~lk~kyk~dfvI~N~E 39 (266)
T COG1692 2 RILFIGDVVGK-PGRKAVKEHLPQLKSKYKIDFVIVNGE 39 (266)
T ss_pred eEEEEecccCc-chHHHHHHHhHHHHHhhcCcEEEEcCc
Confidence 57899999986 333456677888888876566666443
No 147
>PRK05564 DNA polymerase III subunit delta'; Validated
Probab=28.92 E-value=1.5e+02 Score=26.01 Aligned_cols=57 Identities=9% Similarity=0.154 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCC-CHHHHHHHHHhcCCCCCCcceec
Q 026377 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFM 87 (239)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vfL 87 (239)
..+..+++.++++.+.. .| ...+.||++|=|.|. +..+...+++.+..+|...++++
T Consensus 71 ~~i~v~~ir~~~~~~~~----~p--~~~~~kv~iI~~ad~m~~~a~naLLK~LEepp~~t~~il 128 (313)
T PRK05564 71 KSIGVDDIRNIIEEVNK----KP--YEGDKKVIIIYNSEKMTEQAQNAFLKTIEEPPKGVFIIL 128 (313)
T ss_pred CCCCHHHHHHHHHHHhc----Cc--ccCCceEEEEechhhcCHHHHHHHHHHhcCCCCCeEEEE
Confidence 44566777777765432 22 234678999999876 45566778888888777665554
No 148
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=24.44 E-value=3.5e+02 Score=23.11 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=31.2
Q ss_pred CCCChhhHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHhhCC
Q 026377 7 STDTTTDLDEQISQLMQCK-PLSEPQVKALCEKAKEILMEES 47 (239)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~e~ 47 (239)
+-.|+.+-..+.+++.+.+ .++++|+..=+..|.+++.++.
T Consensus 46 TNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~ 87 (262)
T KOG3040|consen 46 TNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQ 87 (262)
T ss_pred ecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcC
Confidence 3455666677777776554 6899999999999999987764
No 149
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=24.36 E-value=5.6e+02 Score=24.10 Aligned_cols=88 Identities=10% Similarity=0.012 Sum_probs=54.6
Q ss_pred HhcCCCCCHHHHHHHHHHHHHHHhhCC--CccccCCceeeecCCCCCHHHHHHHHHh--cC-CCCCCcceeccccccCCC
Q 026377 21 LMQCKPLSEPQVKALCEKAKEILMEES--NVQPVKSPVTICGDIHGQFHDLAELFQI--GG-KCPDTNYLFMGDYVDRGY 95 (239)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~~~~e~--~~~~~~~~i~viGDIHG~~~~L~~ll~~--~~-~~~~~~~vfLGD~vDrG~ 95 (239)
+.+.+.+|+++...|.+...++..... .+.........-.|+|-+.......+.. .+ ..+....+--|++|..|.
T Consensus 59 l~~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~ 138 (464)
T PRK00485 59 NAELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQ 138 (464)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCC
Confidence 456678999999998887777754322 1211122334578889888776654432 23 112244565699999998
Q ss_pred CcHHHHHHHHHhh
Q 026377 96 YSVETVTLLVALK 108 (239)
Q Consensus 96 ~s~evl~~l~~l~ 108 (239)
-+.+++...+.+.
T Consensus 139 SrnD~v~Ta~~L~ 151 (464)
T PRK00485 139 SSNDTFPTAMHIA 151 (464)
T ss_pred CchhHHHHHHHHH
Confidence 8877766555544
No 150
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=24.30 E-value=96 Score=27.70 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.6
Q ss_pred CCceeeecCCCCCHHHHHHHHHhcCCCCCCcceeccccc
Q 026377 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV 91 (239)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v 91 (239)
...|..++|+=|+-..+.++-+.. +.+.+||.||..
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 456888999999888888887765 466789999864
No 151
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=24.08 E-value=98 Score=26.92 Aligned_cols=7 Identities=29% Similarity=0.767 Sum_probs=2.8
Q ss_pred EcCCcch
Q 026377 118 LRGNHES 124 (239)
Q Consensus 118 lrGNHE~ 124 (239)
+-|+|=.
T Consensus 208 VAGdHa~ 214 (262)
T PF06180_consen 208 VAGDHAK 214 (262)
T ss_dssp S--HHHH
T ss_pred ccchhhh
Confidence 4576644
No 152
>PRK04531 acetylglutamate kinase; Provisional
Probab=24.02 E-value=95 Score=28.74 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=21.0
Q ss_pred CHHHHHHHHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 026377 65 QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 65 ~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 118 (239)
..+.+.++|+.++. ..|++.++.......|.+.++|
T Consensus 6 ~~~~~~~~l~~~~~------------------~~e~~~~l~~F~~~~~~~~~VI 41 (398)
T PRK04531 6 TRQIIVRLLSSMAS------------------AKEISQYLKRFSQLDAERFAVI 41 (398)
T ss_pred hHHHHHHHHHhcCC------------------hhhhHHHHHHHhCcCCCcEEEE
Confidence 45566667766543 3467777766665455555444
No 153
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=23.87 E-value=1.3e+02 Score=22.25 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=38.9
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCCCC-----------------CCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEE
Q 026377 55 PVTICGDIHGQFHDLAELFQIGGKCP-----------------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (239)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~-----------------~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 117 (239)
||.||.|=-.....|..+|+-+|... ...+|.+|+.- .....+..+...+|.--++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 46667666666777777777665432 11234455543 4445555555556655688
Q ss_pred EcCCcchh
Q 026377 118 LRGNHESR 125 (239)
Q Consensus 118 lrGNHE~~ 125 (239)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 89998886
No 154
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=23.15 E-value=2.4e+02 Score=20.65 Aligned_cols=41 Identities=24% Similarity=0.482 Sum_probs=25.6
Q ss_pred HHHhcCCCCCCcceeccccccCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 026377 72 LFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (239)
Q Consensus 72 ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 118 (239)
+-+.+..-|..++|++||= |..-.|+...+. ..+|+++.++
T Consensus 55 i~~i~~~fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 55 IERILRDFPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHHHHHHCCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEEE
Confidence 3333345567889999975 444466666653 4588877543
No 155
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.47 E-value=27 Score=26.74 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=19.6
Q ss_pred eeeecCCCC------CHHHHHHHHHhcCCCCCCcceeccccccCC
Q 026377 56 VTICGDIHG------QFHDLAELFQIGGKCPDTNYLFMGDYVDRG 94 (239)
Q Consensus 56 i~viGDIHG------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG 94 (239)
..-+||.|| ..+++....+. -++++|||.|+|
T Consensus 23 ~~yi~~~~g~~~~~~d~dsfeE~knd-------f~~ll~~lld~G 60 (122)
T COG3792 23 WNYIGDAYGLSSGQRDPDSFEERKND-------FFFLLGDLLDEG 60 (122)
T ss_pred HHHHHHHhCCccccCChhhHHHHHHH-------HHHHHHHHhcCC
Confidence 344667777 55566555442 356688888864
No 156
>PF14164 YqzH: YqzH-like protein
Probab=21.90 E-value=2.4e+02 Score=19.09 Aligned_cols=27 Identities=33% Similarity=0.629 Sum_probs=23.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCc
Q 026377 23 QCKPLSEPQVKALCEKAKEILMEESNV 49 (239)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~ 49 (239)
++.+++..|...|++.+.....+++..
T Consensus 22 ~~~pls~~E~~~L~~~i~~~~~~~~~~ 48 (64)
T PF14164_consen 22 ECMPLSDEEWEELCKHIQERKNEEPDE 48 (64)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCCCc
Confidence 345889999999999999999888864
No 157
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=21.85 E-value=4.4e+02 Score=24.56 Aligned_cols=96 Identities=22% Similarity=0.250 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCCC-------CHHHHHHHH---HhcCCCCCCccee----------
Q 026377 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHG-------QFHDLAELF---QIGGKCPDTNYLF---------- 86 (239)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG-------~~~~L~~ll---~~~~~~~~~~~vf---------- 86 (239)
.....+.+.++...+++..-..++..++....+||==| +-.+|.-+. +.+++.+...+.+
T Consensus 169 ~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasefy 248 (423)
T COG0148 169 VGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEFY 248 (423)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhhc
Confidence 45678899999999999988888888887777888655 344454444 4666655422111
Q ss_pred -ccccccC--CCCcHHHHHHHHHhhhhCCCcEEEE-cCCcch
Q 026377 87 -MGDYVDR--GYYSVETVTLLVALKVRYPQRITIL-RGNHES 124 (239)
Q Consensus 87 -LGD~vDr--G~~s~evl~~l~~l~~~~p~~v~~l-rGNHE~ 124 (239)
-|.|+-. ...+.|.++++..|..+|| ++.+ -|=||.
T Consensus 249 ~~~~Y~~~~~~~~~~e~i~~~~~Lv~~Yp--ivsiEDpl~E~ 288 (423)
T COG0148 249 KDGKYVLEGESLTSEELIEYYLELVKKYP--IVSIEDPLSED 288 (423)
T ss_pred cCCeeeecCcccCHHHHHHHHHHHHHhCC--EEEEcCCCCch
Confidence 2224332 3456789999999999999 6644 444443
No 158
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.68 E-value=63 Score=29.23 Aligned_cols=57 Identities=28% Similarity=0.420 Sum_probs=32.7
Q ss_pred hhCCCccccCCceeeecCCC-CCHHHHHHHHHhcCCCCCCccee-cccccc--CCCCcHHHHHHHHHhh
Q 026377 44 MEESNVQPVKSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLF-MGDYVD--RGYYSVETVTLLVALK 108 (239)
Q Consensus 44 ~~e~~~~~~~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vf-LGD~vD--rG~~s~evl~~l~~l~ 108 (239)
++-|-.++....+.++||.| ||+.++... +..++| .-|+=. -|+...+++.+..+|.
T Consensus 47 ~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 47 KTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred hcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHH
Confidence 34455667777899999999 677665432 223333 444411 2455555555555554
No 159
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=21.68 E-value=2.7e+02 Score=23.42 Aligned_cols=60 Identities=18% Similarity=0.189 Sum_probs=39.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeeecCCC------CCHHHHHHHHHhcCCCCCCcceecccc
Q 026377 23 QCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIH------GQFHDLAELFQIGGKCPDTNYLFMGDY 90 (239)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIH------G~~~~L~~ll~~~~~~~~~~~vfLGD~ 90 (239)
++-.+|..+..+.++++.+++.... ...+++.||+- .++..+.++++... ...++.-||-
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~-----~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH 99 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYG-----IEALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH 99 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcC-----CCEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC
Confidence 3455777788888888888766553 23789999986 23555666666543 2345556765
No 160
>PF04839 PSRP-3_Ycf65: Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65); InterPro: IPR006924 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This small acidic protein is found in 30S ribosomal subunit of cyanobacteria and plant plastids. In plants it has been named plastid-specific ribosomal protein 3 (PSRP-3), and in cyanobacteria it is named Ycf65. Plastid-specific ribosomal proteins may mediate the effects of nuclear factors on plastid translation. The acidic PSRPs are thought to contribute to protein-protein interactions in the 30S subunit, and are not thought to bind RNA [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome, 0009536 plastid; PDB: 2KT9_A.
Probab=20.06 E-value=2.5e+02 Score=17.93 Aligned_cols=31 Identities=23% Similarity=0.191 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 026377 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILM 44 (239)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 44 (239)
.+.+-..+....=|++.+-+.||.++.++++
T Consensus 13 We~lk~eLe~K~WIs~~e~i~lLN~~TeiIN 43 (49)
T PF04839_consen 13 WEQLKNELESKPWISEKERIELLNQATEIIN 43 (49)
T ss_dssp HHHHHHHHHHSTTS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 4666777778888999999999999999875
No 161
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=20.03 E-value=4.1e+02 Score=25.05 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCceeeecC-CCCCHHHHHHHHHhcCCCCCCc-ceeccccccCCCCcHHHHHHH
Q 026377 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD-IHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLL 104 (239)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGD-IHG~~~~L~~ll~~~~~~~~~~-~vfLGD~vDrG~~s~evl~~l 104 (239)
++.+++.+-+.....+=.+.. .......+.+|-| ..++.+.+...++.....+... ++.|||+.--|.+|.++=+.+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 455665555544333321111 1223334455555 5788899988888776666555 788999999999998876666
Q ss_pred HHhhhhCCCcEEEEcCC
Q 026377 105 VALKVRYPQRITILRGN 121 (239)
Q Consensus 105 ~~l~~~~p~~v~~lrGN 121 (239)
-+......-...++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 55544332246777787
Done!