Query 026379
Match_columns 239
No_of_seqs 310 out of 1177
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:16:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026379.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026379hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14116 gpmA phosphoglyceromu 100.0 5E-31 1.1E-35 225.6 17.3 149 65-213 1-219 (228)
2 PRK14119 gpmA phosphoglyceromu 100.0 1.4E-30 3.1E-35 222.8 17.8 149 65-213 1-219 (228)
3 TIGR00249 sixA phosphohistidin 100.0 8.4E-30 1.8E-34 205.3 19.0 150 66-235 1-152 (152)
4 PRK03482 phosphoglycerate muta 100.0 8.3E-30 1.8E-34 215.8 19.4 147 65-213 1-187 (215)
5 PRK13463 phosphatase PhoE; Pro 100.0 1.4E-29 3E-34 213.0 19.2 147 65-213 2-189 (203)
6 PRK14117 gpmA phosphoglyceromu 100.0 7.1E-30 1.5E-34 218.8 17.7 149 65-213 1-219 (230)
7 PRK15004 alpha-ribazole phosph 100.0 7.2E-30 1.6E-34 213.8 17.3 146 66-213 1-186 (199)
8 PRK14118 gpmA phosphoglyceromu 100.0 9E-30 1.9E-34 217.7 17.8 148 66-213 1-218 (227)
9 PRK13462 acid phosphatase; Pro 100.0 9.2E-30 2E-34 214.3 16.9 151 64-214 4-185 (203)
10 PRK14120 gpmA phosphoglyceromu 100.0 1.4E-29 3.1E-34 219.2 17.8 150 63-212 2-219 (249)
11 PRK01112 phosphoglyceromutase; 100.0 1.8E-29 4E-34 216.0 17.3 150 65-216 1-221 (228)
12 PRK01295 phosphoglyceromutase; 100.0 3.6E-29 7.8E-34 211.1 18.7 150 64-213 1-195 (206)
13 PRK14115 gpmA phosphoglyceromu 100.0 2.3E-29 5.1E-34 217.7 17.8 148 66-213 1-218 (247)
14 TIGR03848 MSMEG_4193 probable 100.0 2.4E-29 5.1E-34 211.4 16.8 146 67-214 1-190 (204)
15 COG0406 phoE Broad specificity 100.0 5.3E-29 1.2E-33 209.4 18.0 151 64-214 1-191 (208)
16 PRK10848 phosphohistidine phos 100.0 8.5E-29 1.9E-33 200.9 18.5 153 66-238 1-155 (159)
17 COG2062 SixA Phosphohistidine 100.0 8.9E-29 1.9E-33 199.9 17.7 157 65-237 1-160 (163)
18 TIGR01258 pgm_1 phosphoglycera 100.0 7.5E-29 1.6E-33 214.3 17.0 147 66-212 1-217 (245)
19 TIGR03162 ribazole_cobC alpha- 100.0 1.2E-27 2.7E-32 196.0 15.7 139 68-208 1-177 (177)
20 PRK07238 bifunctional RNase H/ 99.9 2E-26 4.4E-31 210.1 21.5 150 62-212 168-356 (372)
21 cd07067 HP_PGM_like Histidine 99.9 6.2E-26 1.3E-30 181.3 16.4 135 67-213 1-144 (153)
22 PTZ00122 phosphoglycerate muta 99.9 8.2E-25 1.8E-29 194.0 20.1 144 64-212 101-276 (299)
23 KOG0235 Phosphoglycerate mutas 99.9 1.4E-24 3.1E-29 182.3 15.9 149 64-213 4-201 (214)
24 COG0588 GpmA Phosphoglycerate 99.9 6.3E-25 1.4E-29 182.0 11.4 149 65-213 1-219 (230)
25 smart00855 PGAM Phosphoglycera 99.9 1.6E-24 3.5E-29 174.0 11.8 123 67-189 1-155 (155)
26 PF00300 His_Phos_1: Histidine 99.9 1.5E-24 3.2E-29 172.9 10.4 123 67-189 1-158 (158)
27 cd07040 HP Histidine phosphata 99.9 4E-23 8.7E-28 164.0 16.2 133 67-213 1-144 (153)
28 PTZ00322 6-phosphofructo-2-kin 99.9 2.8E-23 6.1E-28 202.1 15.3 147 66-212 420-626 (664)
29 PRK06193 hypothetical protein; 99.9 6.1E-23 1.3E-27 172.5 15.3 152 66-239 43-204 (206)
30 PTZ00123 phosphoglycerate muta 99.9 1.1E-22 2.3E-27 175.0 16.2 131 83-213 8-206 (236)
31 PRK15416 lipopolysaccharide co 99.9 1.1E-21 2.4E-26 163.8 15.5 131 66-212 55-187 (201)
32 KOG4609 Predicted phosphoglyce 99.8 1.6E-18 3.5E-23 143.8 13.7 177 31-212 49-261 (284)
33 KOG3734 Predicted phosphoglyce 99.6 2.7E-14 5.9E-19 123.6 13.0 111 86-196 66-216 (272)
34 KOG0234 Fructose-6-phosphate 2 99.6 2.7E-14 5.9E-19 130.3 13.5 145 66-212 240-419 (438)
35 KOG4754 Predicted phosphoglyce 99.6 6.2E-14 1.3E-18 116.4 12.2 69 65-133 14-93 (248)
36 cd07061 HP_HAP_like Histidine 98.0 7.6E-06 1.6E-10 70.1 5.5 60 66-134 4-73 (242)
37 PF00328 His_Phos_2: Histidine 96.2 0.0098 2.1E-07 52.6 6.0 45 90-134 63-116 (347)
38 KOG3720 Lysosomal & prostatic 95.4 0.061 1.3E-06 50.1 7.7 69 66-134 36-127 (411)
39 PRK10173 glucose-1-phosphatase 94.9 0.1 2.2E-06 48.7 7.6 69 66-134 33-128 (413)
40 PRK10172 phosphoanhydride phos 94.6 0.11 2.5E-06 48.6 7.0 69 66-134 36-130 (436)
41 KOG1057 Arp2/3 complex-interac 94.0 0.085 1.8E-06 52.1 5.1 46 89-134 511-571 (1018)
42 KOG1382 Multiple inositol poly 83.4 3.3 7.2E-05 39.0 6.3 50 86-135 129-183 (467)
43 COG1570 XseA Exonuclease VII, 51.0 1.7E+02 0.0036 27.8 9.9 82 96-184 108-203 (440)
44 COG1136 SalX ABC-type antimicr 50.1 22 0.00049 30.4 3.8 35 156-190 175-209 (226)
45 PF06821 Ser_hydrolase: Serine 42.1 41 0.00088 27.3 4.0 37 158-194 38-74 (171)
46 COG3840 ThiQ ABC-type thiamine 36.6 69 0.0015 27.1 4.5 94 84-185 96-191 (231)
47 COG3545 Predicted esterase of 36.5 78 0.0017 26.2 4.8 39 156-194 40-78 (181)
48 PF01764 Lipase_3: Lipase (cla 34.1 1.7E+02 0.0036 21.8 6.3 52 161-212 49-103 (140)
49 COG1121 ZnuC ABC-type Mn/Zn tr 33.2 94 0.002 27.2 5.1 40 141-183 159-198 (254)
50 PF12048 DUF3530: Protein of u 31.1 1.4E+02 0.003 26.6 6.0 38 160-197 174-215 (310)
51 TIGR03720 exospor_lead exospor 30.4 26 0.00056 19.4 0.7 14 3-16 1-14 (26)
52 TIGR00237 xseA exodeoxyribonuc 30.2 4.6E+02 0.01 24.5 9.7 79 99-184 105-197 (432)
53 PF02698 DUF218: DUF218 domain 29.9 2.6E+02 0.0056 21.5 7.6 98 86-193 14-117 (155)
54 PF01094 ANF_receptor: Recepto 29.0 3.7E+02 0.008 23.0 11.2 102 90-196 101-202 (348)
55 cd06366 PBP1_GABAb_receptor Li 28.5 4E+02 0.0087 23.3 8.6 102 91-198 116-217 (350)
56 COG2390 DeoR Transcriptional r 27.2 4.7E+02 0.01 23.6 8.8 89 99-196 44-136 (321)
57 COG1116 TauB ABC-type nitrate/ 26.9 49 0.0011 28.8 2.2 41 141-183 150-190 (248)
58 PF00762 Ferrochelatase: Ferro 26.1 3.4E+02 0.0074 24.3 7.6 60 123-187 209-268 (316)
59 PF06506 PrpR_N: Propionate ca 25.5 3.5E+02 0.0076 21.6 7.1 83 92-196 16-101 (176)
60 PRK02269 ribose-phosphate pyro 24.2 4E+02 0.0086 23.9 7.7 104 86-194 140-266 (320)
61 COG0488 Uup ATPase components 23.0 93 0.002 30.2 3.6 45 163-210 189-233 (530)
62 cd06362 PBP1_mGluR Ligand bind 21.9 6.2E+02 0.013 23.2 9.6 97 94-196 156-253 (452)
63 COG4196 Uncharacterized protei 21.7 5.4E+02 0.012 25.1 8.1 162 1-170 46-215 (808)
64 PRK01259 ribose-phosphate pyro 21.7 3.4E+02 0.0074 24.2 6.7 94 98-195 145-258 (309)
65 PRK04923 ribose-phosphate pyro 21.6 4.9E+02 0.011 23.4 7.7 90 99-194 153-266 (319)
66 PF12000 Glyco_trans_4_3: Gkyc 21.4 1.3E+02 0.0027 24.6 3.6 19 101-119 56-74 (171)
67 COG1122 CbiO ABC-type cobalt t 20.4 1E+02 0.0022 26.4 3.0 30 155-184 170-199 (235)
68 cd03257 ABC_NikE_OppD_transpor 20.2 1.9E+02 0.0041 23.8 4.5 43 141-185 165-207 (228)
69 COG3910 Predicted ATPase [Gene 20.1 88 0.0019 26.6 2.4 26 162-188 167-192 (233)
No 1
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=5e-31 Score=225.63 Aligned_cols=149 Identities=17% Similarity=0.222 Sum_probs=118.7
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------ 136 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------ 136 (239)
|++|||||||+|.+|..+ +|+.|.|||+.|++||+++++.|++.+++||.|||||+.||+|||++|++..+.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~ 80 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPET 80 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcc
Confidence 578999999999999876 689999999999999999999998755689999999999999999999765321
Q ss_pred ----CcceeEEEe------------cc-----------------------------cc----cccCCCCccHHHHHHHHH
Q 026379 137 ----FLEAEVHFI------------SS-----------------------------FY----SVAAMDGQTAEHLQKAIC 167 (239)
Q Consensus 137 ----~~~~~~~~~------------~~-----------------------------l~----~~~~p~GEs~~~l~~ri~ 167 (239)
+.|..+-.+ ++ .| ...+|+||+++++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~ 160 (228)
T PRK14116 81 KTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVI 160 (228)
T ss_pred cCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHHH
Confidence 111100000 00 00 123589999999999987
Q ss_pred hhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 168 KYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 168 ~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
.+++ ..+++|||||||++|++++++++|. .+.+++|++++|+++.+
T Consensus 161 ~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14116 161 PFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGEPVVYDFDEK 219 (228)
T ss_pred HHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCCeEEEEECCC
Confidence 6431 2468999999999999999999997 36799999999999864
No 2
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=1.4e-30 Score=222.77 Aligned_cols=149 Identities=16% Similarity=0.175 Sum_probs=117.7
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------ 136 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------ 136 (239)
|++|||||||||.+|..+ +|+.|.|||+.|++||++++++|+..+..+|.|||||++||+|||++|++..+.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~~ 80 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY 80 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCee
Confidence 578999999999999876 689999999999999999999998766689999999999999999999864321
Q ss_pred ----CcceeEEEecc------------c----c-----------------------------cccCCCCccHHHHHHHHH
Q 026379 137 ----FLEAEVHFISS------------F----Y-----------------------------SVAAMDGQTAEHLQKAIC 167 (239)
Q Consensus 137 ----~~~~~~~~~~~------------l----~-----------------------------~~~~p~GEs~~~l~~ri~ 167 (239)
+.|..+-.++. . | ...+|+|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 160 (228)
T PRK14119 81 KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI 160 (228)
T ss_pred ECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHHH
Confidence 11110000000 0 0 012478999999999987
Q ss_pred hhhc-----C--CCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 168 KYSR-----D--EILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 168 ~~~~-----~--~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
.++. . .+++|||||||++|+++++++++. .+.+++|++++++++++
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14119 161 PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDD 219 (228)
T ss_pred HHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhcCCCCCceEEEEECCC
Confidence 6532 1 457899999999999999999986 35789999999999864
No 3
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.97 E-value=8.4e-30 Score=205.31 Aligned_cols=150 Identities=20% Similarity=0.197 Sum_probs=125.1
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEe
Q 026379 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFI 145 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~ 145 (239)
|+|||||||+++++.. +|.|+|||++|++||++++++|++.++.+|.|||||+.||+|||+++++.++. ...+...
T Consensus 1 m~l~LvRHg~a~~~~~--~d~dr~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~--~~~~~~~ 76 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA--SDSVRPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNL--PSSAEVL 76 (152)
T ss_pred CEEEEEeCCCcccccC--CCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCC--CcceEEc
Confidence 5899999999998754 78999999999999999999999877789999999999999999999998752 2345666
Q ss_pred cccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcC--CcccCCceEEEEEEeCCcchhhhhccC
Q 026379 146 SSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGA--FIELKTCNAALLETTGKSWEEAFTAAG 223 (239)
Q Consensus 146 ~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~--~~~~~~~si~~l~~~~~~W~~~~~~~~ 223 (239)
+.+|. +++..++.+.+.+......++|+||||++.|..++.++++. .+.+++|++++|+++..
T Consensus 77 ~~l~p-----~~~~~~~~~~l~~~~~~~~~~vliVgH~P~i~~l~~~l~~~~~~~~~~~~~~~~l~~~~~---------- 141 (152)
T TIGR00249 77 EGLTP-----CGDIGLVSDYLEALTNEGVASVLLVSHLPLVGYLVAELCPGENPIMFTTGAIASLLWDES---------- 141 (152)
T ss_pred cCcCC-----CCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhCCCCCCcCcceeEEEEEEecC----------
Confidence 77773 23456677777654334567999999999999999999985 56799999999999742
Q ss_pred CCceEEEEeecC
Q 026379 224 LGGWKLQGIVTP 235 (239)
Q Consensus 224 ~g~~~L~~~~~P 235 (239)
+.|+|.|++.|
T Consensus 142 -~~~~l~w~~~p 152 (152)
T TIGR00249 142 -KNGTLNWQMSP 152 (152)
T ss_pred -CCeEEEEecCC
Confidence 67899999987
No 4
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.97 E-value=8.3e-30 Score=215.81 Aligned_cols=147 Identities=21% Similarity=0.331 Sum_probs=116.8
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------ 136 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------ 136 (239)
|++|||||||++.+|..+ +|+.|.|||+.|++||++++++|++ ..++.|||||+.||+|||++|++.++.
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 78 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERAKE--LGITHIISSDLGRTRRTAEIIAQACGCDIIFDP 78 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCCCCcCHHHHHHHHHHHHHHhc--CCCCEEEECCcHHHHHHHHHHHHhcCCCeeECh
Confidence 589999999999999765 5789999999999999999999985 467999999999999999999887641
Q ss_pred -CcceeEEEe-----ccc------c---------cccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHHH
Q 026379 137 -FLEAEVHFI-----SSF------Y---------SVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEAA 190 (239)
Q Consensus 137 -~~~~~~~~~-----~~l------~---------~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l~ 190 (239)
+.|..+..+ +++ | ...+|+||+++++.+|+..++. ..+++|||||||++|++++
T Consensus 79 ~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l~ 158 (215)
T PRK03482 79 RLRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLELPQGSRPLLVSHGIALGCLV 158 (215)
T ss_pred hccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHH
Confidence 111100000 000 1 1235799999999999886542 3456899999999999999
Q ss_pred HHHhcC------CcccCCceEEEEEEeCC
Q 026379 191 SMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 191 ~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+++++. .+.++||++++|+++..
T Consensus 159 ~~l~~~~~~~~~~~~~~n~sis~~~~~~~ 187 (215)
T PRK03482 159 STILGLPAWAERRLRLRNCSISRVDYQES 187 (215)
T ss_pred HHHhCCChhhhhccCCCCcEEEEEEEeCC
Confidence 999986 35789999999999764
No 5
>PRK13463 phosphatase PhoE; Provisional
Probab=99.97 E-value=1.4e-29 Score=212.99 Aligned_cols=147 Identities=16% Similarity=0.228 Sum_probs=115.5
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------ 136 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------ 136 (239)
+++|||||||++.+|..+ +|+.|.|||++|++||+++++.|+. .+++.|||||+.||+|||+++++.++.
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 79 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKNSALTENGILQAKQLGERMKD--LSIHAIYSSPSERTLHTAELIKGERDIPIIADE 79 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHHhcCCCCceECc
Confidence 588999999999999876 6888999999999999999999985 568999999999999999999876431
Q ss_pred -CcceeEEEe------------ccc--------ccccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHHH
Q 026379 137 -FLEAEVHFI------------SSF--------YSVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEAA 190 (239)
Q Consensus 137 -~~~~~~~~~------------~~l--------~~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l~ 190 (239)
+.|.....+ ++. ....+|+||+++++.+|+..+++ ..+++|||||||++|++++
T Consensus 80 ~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~~ 159 (203)
T PRK13463 80 HFYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLV 159 (203)
T ss_pred CceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHH
Confidence 111100000 000 11235799999999999976542 3457899999999999999
Q ss_pred HHHhcCC------c-ccCCceEEEEEEeCC
Q 026379 191 SMFTGAF------I-ELKTCNAALLETTGK 213 (239)
Q Consensus 191 ~~l~g~~------~-~~~~~si~~l~~~~~ 213 (239)
++++|.+ + .+++|++++++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 189 (203)
T PRK13463 160 GHFAGIEIENVWDDPFMHSASLSIIEFEDG 189 (203)
T ss_pred HHHhCCCHHHHhhccCccCceEEEEEEeCC
Confidence 9999873 2 368999999999754
No 6
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=7.1e-30 Score=218.79 Aligned_cols=149 Identities=16% Similarity=0.182 Sum_probs=116.6
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhc-------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQ------- 135 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~------- 135 (239)
|++|||||||+|.+|..+ +|+.|.|||++|++||++++++|++..+++|.|||||++||+|||+++++...
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 80 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPVE 80 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCce
Confidence 578999999999999876 68999999999999999999999875578999999999999999999874321
Q ss_pred ---CCcceeEEEe------------cc---------------------------------cccccCCCCccHHHHHHHHH
Q 026379 136 ---GFLEAEVHFI------------SS---------------------------------FYSVAAMDGQTAEHLQKAIC 167 (239)
Q Consensus 136 ---~~~~~~~~~~------------~~---------------------------------l~~~~~p~GEs~~~l~~ri~ 167 (239)
.+.|..+-.+ ++ .....+|+||++.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~ 160 (230)
T PRK14117 81 KSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERAL 160 (230)
T ss_pred eCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCCCCCCCHHHHHHHHH
Confidence 0111100000 00 00123579999999999987
Q ss_pred hhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 168 KYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 168 ~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
.+++ ..+++|||||||++|++++++++|. .+.++||++++|+++++
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~s~~~i~~~~~ 219 (230)
T PRK14117 161 PFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPPLVFEFDEK 219 (230)
T ss_pred HHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhcCCCCceEEEEEECCC
Confidence 5432 1347899999999999999999987 35799999999999753
No 7
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=99.97 E-value=7.2e-30 Score=213.84 Aligned_cols=146 Identities=14% Similarity=0.177 Sum_probs=116.0
Q ss_pred eEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------
Q 026379 66 RRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------- 136 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------- 136 (239)
|+|||||||+|.+|..+ +|+.|.|||+.|++||+++++.|+. ++++.|||||+.||+|||+++++.++.
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 78 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLRD--VPFDLVLCSELERAQHTARLVLSDRQLPVHIIPE 78 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHHhC--CCCCEEEECchHHHHHHHHHHHhcCCCCceeChh
Confidence 57999999999999776 6889999999999999999999984 578999999999999999999876531
Q ss_pred CcceeEEEe------------cc--------cccccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHHHH
Q 026379 137 FLEAEVHFI------------SS--------FYSVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEAAS 191 (239)
Q Consensus 137 ~~~~~~~~~------------~~--------l~~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l~~ 191 (239)
+.|..+..+ ++ .....+|+||++.++.+|+.++++ ..+++|||||||++|+.++.
T Consensus 79 L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~~ 158 (199)
T PRK15004 79 LNEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLIA 158 (199)
T ss_pred heeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHHH
Confidence 111000000 00 011236799999999999886543 34578999999999999999
Q ss_pred HHhcC------CcccCCceEEEEEEeCC
Q 026379 192 MFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 192 ~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+++|. .+.+++|++++|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (199)
T PRK15004 159 RLLGMPAEAMWHFRVEQGCWSAIDINQG 186 (199)
T ss_pred HHhCCCHHHHhccccCCceEEEEEecCC
Confidence 99986 35689999999999753
No 8
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=9e-30 Score=217.75 Aligned_cols=148 Identities=16% Similarity=0.216 Sum_probs=117.2
Q ss_pred eEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------
Q 026379 66 RRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------- 136 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------- 136 (239)
|+|||||||+|.+|..+ +|+.|.|||+.|++||++++++|++....+|.|||||+.||+|||++|++..+.
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~ 80 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK 80 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCeec
Confidence 57999999999999876 688999999999999999999998755678999999999999999999865321
Q ss_pred ---CcceeEEEecc------------c----c-----------------------------cccCCCCccHHHHHHHHHh
Q 026379 137 ---FLEAEVHFISS------------F----Y-----------------------------SVAAMDGQTAEHLQKAICK 168 (239)
Q Consensus 137 ---~~~~~~~~~~~------------l----~-----------------------------~~~~p~GEs~~~l~~ri~~ 168 (239)
+.|..+-.++. . | ...+|+||++.++.+|+.+
T Consensus 81 ~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~ 160 (227)
T PRK14118 81 NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVLP 160 (227)
T ss_pred CCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHHH
Confidence 11110000000 0 0 0235899999999999876
Q ss_pred hhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 169 YSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 169 ~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+++ ..+++|||||||++|++++++++|. .+.+++|++++|+++++
T Consensus 161 ~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~~~s~~~~~~~~~ 218 (227)
T PRK14118 161 FWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDN 218 (227)
T ss_pred HHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCCCCceEEEEECCC
Confidence 542 2467999999999999999999986 35799999999999764
No 9
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=9.2e-30 Score=214.26 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=116.2
Q ss_pred CceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhh----cCC
Q 026379 64 VARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHV----QGF 137 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~----~~~ 137 (239)
.|++|||||||||++|..+ +|+.|.|||+.|++||+++++.|++..+..+.|||||+.||+|||+++.... ..+
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~L 83 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTELELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLAGLTVDEVSGLL 83 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHhcCcccccCccc
Confidence 3689999999999999876 5889999999999999999999987544334899999999999999983211 011
Q ss_pred cceeEEEe------------cc--cccccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHHHHHHhcC--
Q 026379 138 LEAEVHFI------------SS--FYSVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEAASMFTGA-- 196 (239)
Q Consensus 138 ~~~~~~~~------------~~--l~~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l~~~l~g~-- 196 (239)
.|..+..+ ++ .|....|+|||++++.+|+.++++ ..+++|||||||++|+++++++++.
T Consensus 84 rE~~~G~~eG~~~~ei~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir~ll~~~l~~~~ 163 (203)
T PRK13462 84 AEWDYGSYEGLTTPQIRESEPDWLVWTHGCPGGESVAQVNERADRAVALALEHMESRDVVFVSHGHFSRAVITRWVELPL 163 (203)
T ss_pred cccCCccccCCcHHHHHHhCchHHhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhCCCH
Confidence 11111000 00 022335799999999999876643 3457899999999999999999986
Q ss_pred ----CcccCCceEEEEEEeCCc
Q 026379 197 ----FIELKTCNAALLETTGKS 214 (239)
Q Consensus 197 ----~~~~~~~si~~l~~~~~~ 214 (239)
.+.+++|++++++++.+.
T Consensus 164 ~~~~~~~~~~~s~s~~~~~~~~ 185 (203)
T PRK13462 164 AEGSRFAMPTASIAICGFEHGV 185 (203)
T ss_pred HHhhhcccCCceEEEEEeeCCc
Confidence 357899999999997653
No 10
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=1.4e-29 Score=219.20 Aligned_cols=150 Identities=17% Similarity=0.213 Sum_probs=117.8
Q ss_pred cCceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC----
Q 026379 63 SVARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG---- 136 (239)
Q Consensus 63 ~~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~---- 136 (239)
.+|++|||||||+|.+|..+ +|+.|.|||++|++||+++++.|++.++.|+.|||||+.||+|||++|++..+.
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~~ 81 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWIP 81 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCCC
Confidence 46789999999999999876 588899999999999999999998765678999999999999999999764321
Q ss_pred ------CcceeEEEecc-------------cc---c---------------------------ccCCCCccHHHHHHHHH
Q 026379 137 ------FLEAEVHFISS-------------FY---S---------------------------VAAMDGQTAEHLQKAIC 167 (239)
Q Consensus 137 ------~~~~~~~~~~~-------------l~---~---------------------------~~~p~GEs~~~l~~ri~ 167 (239)
+.|..+-.++. .+ . ..+|+||++.++.+|+.
T Consensus 82 i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~ 161 (249)
T PRK14120 82 VRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVARFL 161 (249)
T ss_pred eEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHHHH
Confidence 11100000000 00 0 01379999999999987
Q ss_pred hhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeC
Q 026379 168 KYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTG 212 (239)
Q Consensus 168 ~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~ 212 (239)
.+++ ..+++|||||||++|+++++++++. .+.+++|++++|++++
T Consensus 162 ~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 219 (249)
T PRK14120 162 PYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELDE 219 (249)
T ss_pred HHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccCCCceEEEEECC
Confidence 6532 2457899999999999999999986 3578999999999976
No 11
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.97 E-value=1.8e-29 Score=215.98 Aligned_cols=150 Identities=23% Similarity=0.278 Sum_probs=118.5
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhc-------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQ------- 135 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~------- 135 (239)
|++||||||||+.+|..+ +|+.|.|||+.|++||++++++|++ .++|.|||||+.||+|||++|++.++
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~~--~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~ 78 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIKD--LPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYI 78 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhhc--CCCCEEEEcCcHHHHHHHHHHHHhhcccccccc
Confidence 588999999999999876 5889999999999999999999985 67899999999999999999975221
Q ss_pred -----------------------------CCcceeEEEe--------------------cccccccCCCCccHHHHHHHH
Q 026379 136 -----------------------------GFLEAEVHFI--------------------SSFYSVAAMDGQTAEHLQKAI 166 (239)
Q Consensus 136 -----------------------------~~~~~~~~~~--------------------~~l~~~~~p~GEs~~~l~~ri 166 (239)
.+.|..+-.+ ..-+...+|+|||+.++.+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~GES~~d~~~Rv 158 (228)
T PRK01112 79 VHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPPQGESLEDTGQRT 158 (228)
T ss_pred cccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCCCCCCHHHHHHHH
Confidence 0111100000 001223478999999999998
Q ss_pred Hhhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCCcch
Q 026379 167 CKYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGKSWE 216 (239)
Q Consensus 167 ~~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~~W~ 216 (239)
..+++ ..+++|||||||++|+.+++++++. .+.+++|++++++++...++
T Consensus 159 ~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (228)
T PRK01112 159 LPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPIVYEWTGQKFE 221 (228)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCcceEEEEECCCCcc
Confidence 75532 2467999999999999999999997 36799999999999876543
No 12
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.97 E-value=3.6e-29 Score=211.07 Aligned_cols=150 Identities=18% Similarity=0.296 Sum_probs=118.8
Q ss_pred CceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC--Ccc
Q 026379 64 VARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG--FLE 139 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~--~~~ 139 (239)
|.++|||||||++.+|..+ +|+.|.|||+.|++||++++++|++.++++|.|||||+.||+|||++|++.++. ++.
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 80 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLET 80 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCe
Confidence 3488999999999999766 678899999999999999999999766789999999999999999999887641 110
Q ss_pred ---e---eEEE----------------------ecccccccCCCCccHHHHHHHHHhh-h----c--CCCCeEEEEeChH
Q 026379 140 ---A---EVHF----------------------ISSFYSVAAMDGQTAEHLQKAICKY-S----R--DEILTVMCMGHNR 184 (239)
Q Consensus 140 ---~---~~~~----------------------~~~l~~~~~p~GEs~~~l~~ri~~~-~----~--~~~~~vliVtH~~ 184 (239)
. ++.+ +..-+...+|+|||+.++.+|+..+ + . ..+++|||||||+
T Consensus 81 ~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~ 160 (206)
T PRK01295 81 IRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGN 160 (206)
T ss_pred EECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChH
Confidence 0 0100 0000123468999999999998764 1 1 2467999999999
Q ss_pred HHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 185 GWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 185 ~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+|++++.++++. .+.+.+|+..++.++..
T Consensus 161 ~ir~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (206)
T PRK01295 161 SLRALVMVLDGLTPEQILKLELATGVPIVYRLNAD 195 (206)
T ss_pred HHHHHHHHHhCCCHHHHhhcCCCCCCcEEEEecCC
Confidence 999999999987 35788999999988753
No 13
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=2.3e-29 Score=217.73 Aligned_cols=148 Identities=17% Similarity=0.206 Sum_probs=118.1
Q ss_pred eEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------
Q 026379 66 RRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------- 136 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------- 136 (239)
|+|||||||+|.+|..+ +|+.|.|||+.|++||+++++.|+..++++|.|||||+.||+|||++|++.++.
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVEK 80 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 57999999999999876 688999999999999999999998766789999999999999999999876541
Q ss_pred ---CcceeEEEecc----------------c-------------------------c----cccCCCCccHHHHHHHHHh
Q 026379 137 ---FLEAEVHFISS----------------F-------------------------Y----SVAAMDGQTAEHLQKAICK 168 (239)
Q Consensus 137 ---~~~~~~~~~~~----------------l-------------------------~----~~~~p~GEs~~~l~~ri~~ 168 (239)
+.|..+..++. . | ...+|+||++.++.+|+.+
T Consensus 81 ~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~ 160 (247)
T PRK14115 81 SWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELPLTESLKDTIARVLP 160 (247)
T ss_pred CccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCCCCCcHHHHHHHHHH
Confidence 11110000000 0 0 1125799999999999876
Q ss_pred hhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 169 YSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 169 ~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+++ ..+++|||||||++|+++++++++. .+.+++|++++|+++.+
T Consensus 161 ~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~~~~~~~~~~l~~~~~ 218 (247)
T PRK14115 161 YWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEILELNIPTGVPLVYELDEN 218 (247)
T ss_pred HHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhheeecCCCceEEEEECCC
Confidence 542 2457899999999999999999987 35799999999999764
No 14
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.97 E-value=2.4e-29 Score=211.41 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=113.9
Q ss_pred EEEEEcCCCCCCCCCC--CCCC-CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------
Q 026379 67 RLILLRHAKSSWEFPS--LRDH-DRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------- 136 (239)
Q Consensus 67 ~l~LvRHGet~~n~~~--~g~~-D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------- 136 (239)
+||||||||+.+|..+ +|+. |.|||+.|++||++++++|+. .++|.|||||+.||+|||++|++.++.
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 78 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLAD--LPIAAIVSSPLERCRETAEPIAEARGLPPRVDER 78 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhc--CCCCEEEeCcHHHHHHHHHHHHHhcCCCceECcc
Confidence 4899999999999766 5777 599999999999999999984 678999999999999999999886531
Q ss_pred CcceeEE-E---------eccc--------ccccCCCCccHHHHHHHHHhhhc----------CCCCeEEEEeChHHHHH
Q 026379 137 FLEAEVH-F---------ISSF--------YSVAAMDGQTAEHLQKAICKYSR----------DEILTVMCMGHNRGWEE 188 (239)
Q Consensus 137 ~~~~~~~-~---------~~~l--------~~~~~p~GEs~~~l~~ri~~~~~----------~~~~~vliVtH~~~i~~ 188 (239)
+.|..+. + .... ....+|+||+++++.+|+..+++ ..+++|||||||++|++
T Consensus 79 L~E~~~G~~eG~~~~e~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ 158 (204)
T TIGR03848 79 LGECDYGDWTGRELKELAKEPLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKS 158 (204)
T ss_pred cccCCCCeeCCcCHHHHhCcHHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHH
Confidence 1111100 0 0001 11235799999999999775432 14568999999999999
Q ss_pred HHHHHhcC------CcccCCceEEEEEEeCCc
Q 026379 189 AASMFTGA------FIELKTCNAALLETTGKS 214 (239)
Q Consensus 189 l~~~l~g~------~~~~~~~si~~l~~~~~~ 214 (239)
++++++|. .+.++||++++|+++++.
T Consensus 159 ll~~~lg~~~~~~~~~~~~n~sit~l~~~~~~ 190 (204)
T TIGR03848 159 VLADALGMHLDLFQRIVVDPCSVSVVRYTPLR 190 (204)
T ss_pred HHHHHhCCCHHHhheeeeCCCeEEEEEEeCCc
Confidence 99999996 356899999999998643
No 15
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.96 E-value=5.3e-29 Score=209.40 Aligned_cols=151 Identities=21% Similarity=0.274 Sum_probs=120.4
Q ss_pred CceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCC--cc
Q 026379 64 VARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGF--LE 139 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~--~~ 139 (239)
++++|||||||||.+|..+ +|+.|.|||+.|++||+.+++.|+..++.++.|||||+.||+|||+++++.++.- ..
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~~~~~~ 80 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGLPLEVD 80 (208)
T ss_pred CceEEEEEecCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCCCceec
Confidence 4689999999999999766 5788999999999999999999997667899999999999999999999987521 00
Q ss_pred e---eEEE--e--------------------cccccccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHH
Q 026379 140 A---EVHF--I--------------------SSFYSVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEA 189 (239)
Q Consensus 140 ~---~~~~--~--------------------~~l~~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l 189 (239)
. ++.+ + .+.+...+++||++.++.+|+..++. ...++|||||||++|+++
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~l 160 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRAL 160 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHHH
Confidence 0 1110 0 01122334569999999999876542 233379999999999999
Q ss_pred HHHHhcC------CcccCCceEEEEEEeCCc
Q 026379 190 ASMFTGA------FIELKTCNAALLETTGKS 214 (239)
Q Consensus 190 ~~~l~g~------~~~~~~~si~~l~~~~~~ 214 (239)
+.++++. .+.++++++++++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~si~~l~~~~~~ 191 (208)
T COG0406 161 LAYLLGLDLEELWRLRLDNASVTVLEFDDGR 191 (208)
T ss_pred HHHhcCCChhhHHhcCCCCceEEEEEeeCCC
Confidence 9999995 467999999999999864
No 16
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.96 E-value=8.5e-29 Score=200.88 Aligned_cols=153 Identities=16% Similarity=0.197 Sum_probs=120.9
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEe
Q 026379 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFI 145 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~ 145 (239)
|+|||||||++.++. .+|.|+|||++|++||++++++|+..++.+|.|||||+.||+|||+++++.++ ++ ..+...
T Consensus 1 m~l~lvRHg~a~~~~--~~d~~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~-~~-~~~~~~ 76 (159)
T PRK10848 1 MQVFIMRHGDAALDA--ASDSVRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLN-LP-ASAEVL 76 (159)
T ss_pred CEEEEEeCCCCCCCC--CCCcCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhC-CC-CceEEc
Confidence 579999999999874 46889999999999999999999987778999999999999999999998864 22 234556
Q ss_pred cccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcC-C-cccCCceEEEEEEeCCcchhhhhccC
Q 026379 146 SSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGA-F-IELKTCNAALLETTGKSWEEAFTAAG 223 (239)
Q Consensus 146 ~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~-~-~~~~~~si~~l~~~~~~W~~~~~~~~ 223 (239)
+++|.... .+...++++.+. ....++|+||||+|.+..++.+|++. . ..+++|++++|+++.
T Consensus 77 ~~l~~~~~--~~~~~~~l~~~~---~~~~~~vllVgH~P~l~~l~~~L~~~~~~~~~~t~~i~~l~~~~----------- 140 (159)
T PRK10848 77 PELTPCGD--VGLVSAYLQALA---NEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIACVTLDE----------- 140 (159)
T ss_pred cCCCCCCC--HHHHHHHHHHHH---hcCCCeEEEEeCcCcHHHHHHHHhCCCCCCCcCCceEEEEEecc-----------
Confidence 77775421 112233444333 23457999999999999999999874 2 248999999999973
Q ss_pred CCceEEEEeecCCCC
Q 026379 224 LGGWKLQGIVTPTSC 238 (239)
Q Consensus 224 ~g~~~L~~~~~P~~~ 238 (239)
.|.|+|+|++.|+.+
T Consensus 141 ~~~~~l~~~~~P~~~ 155 (159)
T PRK10848 141 SGKGTFNWQMSPCNL 155 (159)
T ss_pred CCCeEEEEEeCHHHh
Confidence 367899999999865
No 17
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-29 Score=199.89 Aligned_cols=157 Identities=32% Similarity=0.439 Sum_probs=129.1
Q ss_pred ceEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEE
Q 026379 65 ARRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHF 144 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~ 144 (239)
||+|||+|||++.|...+..|.|||||++|+++++++|++|++.++.||.|+|||+.||+|||+++++.++ .+....+
T Consensus 1 m~~L~LmRHgkA~~~~~~~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~--~~~~~~~ 78 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGIADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLG--EKKVEVF 78 (163)
T ss_pred CceEEEeecccccccCCCCCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhC--cccceec
Confidence 68999999999999877778999999999999999999999999999999999999999999999999986 2223445
Q ss_pred ecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcC---CcccCCceEEEEEEeCCcchhhhhc
Q 026379 145 ISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGA---FIELKTCNAALLETTGKSWEEAFTA 221 (239)
Q Consensus 145 ~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~---~~~~~~~si~~l~~~~~~W~~~~~~ 221 (239)
.+.+|.. ....+.+.++.. .+...++++|+|.|.+..++..+++. ...||++++.++++++..+..
T Consensus 79 ~~l~p~~------d~~~~l~~l~~~-~d~v~~vllVgH~P~l~~l~~~L~~~~~~~~~fptsgia~l~~~~~~~~~---- 147 (163)
T COG2062 79 EELLPNG------DPGTVLDYLEAL-GDGVGSVLLVGHNPLLEELALLLAGGARLPVKFPTSGIAVLEFDGKWAPG---- 147 (163)
T ss_pred cccCCCC------CHHHHHHHHHHh-cccCceEEEECCCccHHHHHHHHccccccccCCCcccEEEEEeccccccc----
Confidence 5555543 245566666643 23567999999999999999999985 678999999999999743222
Q ss_pred cCCCceEEEEeecCCC
Q 026379 222 AGLGGWKLQGIVTPTS 237 (239)
Q Consensus 222 ~~~g~~~L~~~~~P~~ 237 (239)
+.|.+.+.+.|..
T Consensus 148 ---~~~~~~~l~~p~~ 160 (163)
T COG2062 148 ---GEGTLAWLVSPLV 160 (163)
T ss_pred ---cccceEEeeccCc
Confidence 5678888877753
No 18
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.96 E-value=7.5e-29 Score=214.32 Aligned_cols=147 Identities=18% Similarity=0.230 Sum_probs=116.8
Q ss_pred eEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC--Ccc--
Q 026379 66 RRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG--FLE-- 139 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~--~~~-- 139 (239)
|+|||||||||.+|..+ +|+.|.|||+.|++||++++++|+..++.+|.|||||++||+|||++|++.++. ++.
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~~ 80 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVKK 80 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCeee
Confidence 57999999999999876 688999999999999999999998766789999999999999999999876531 110
Q ss_pred -e---eEEE--eccc----------------c-----------------------------cccCCCCccHHHHHHHHHh
Q 026379 140 -A---EVHF--ISSF----------------Y-----------------------------SVAAMDGQTAEHLQKAICK 168 (239)
Q Consensus 140 -~---~~~~--~~~l----------------~-----------------------------~~~~p~GEs~~~l~~ri~~ 168 (239)
. ++.+ ++.+ | ...+|+|||+.++.+|+..
T Consensus 81 ~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~ 160 (245)
T TIGR01258 81 SWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVLP 160 (245)
T ss_pred CcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCCCCCCHHHHHHHHHH
Confidence 0 0000 0000 0 0025789999999999876
Q ss_pred hhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeC
Q 026379 169 YSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTG 212 (239)
Q Consensus 169 ~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~ 212 (239)
+++ ..+++|||||||++|+++++++++. .+.+++|++++++++.
T Consensus 161 ~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (245)
T TIGR01258 161 YWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEILELNIPTGIPLVYELDE 217 (245)
T ss_pred HHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhheecCCCceEEEEECC
Confidence 532 2457899999999999999999986 3579999999999975
No 19
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.95 E-value=1.2e-27 Score=196.04 Aligned_cols=139 Identities=17% Similarity=0.240 Sum_probs=109.0
Q ss_pred EEEEcCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------Ccc
Q 026379 68 LILLRHAKSSWEFPSL-RDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG-------FLE 139 (239)
Q Consensus 68 l~LvRHGet~~n~~~~-g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~-------~~~ 139 (239)
||||||||+.+|..+. |+.|.|||+.|++||+++++.|+. ..++.|||||+.||+|||+++++.++. +.|
T Consensus 1 i~lvRHg~t~~n~~~~~g~~d~~Lt~~G~~qa~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E 78 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCYGQTDVPLAEKGAEQAAALREKLAD--VPFDAVYSSPLSRCRELAEILAERRGLPIIKDPRLRE 78 (177)
T ss_pred CEEEeCCCCccCCCceeCCCCCCcChhHHHHHHHHHHHhcC--CCCCEEEECchHHHHHHHHHHHhhcCCCceECCcccc
Confidence 6999999999997653 789999999999999999999974 678999999999999999999876531 111
Q ss_pred eeEE-E------------------ecccccccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHHHHHHHhc
Q 026379 140 AEVH-F------------------ISSFYSVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEEAASMFTG 195 (239)
Q Consensus 140 ~~~~-~------------------~~~l~~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~l~~~l~g 195 (239)
..+. + ........+|+||++.++.+|+.+++. ..+++|||||||++|+.++.+++|
T Consensus 79 ~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~~~~ 158 (177)
T TIGR03162 79 MDFGDWEGRSWDEIPEAYPELDAWAADWQHARPPGGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAHLLG 158 (177)
T ss_pred ccCCccCCCCHHHHHHhCHHHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhC
Confidence 0000 0 000011245789999999999886542 256899999999999999999998
Q ss_pred C------CcccCCceEEEE
Q 026379 196 A------FIELKTCNAALL 208 (239)
Q Consensus 196 ~------~~~~~~~si~~l 208 (239)
. .+.++||++++|
T Consensus 159 ~~~~~~~~~~~~n~~i~~l 177 (177)
T TIGR03162 159 LPLEQWWSFDVEYGSITLI 177 (177)
T ss_pred CCHHHHhccccCCeeEEeC
Confidence 7 357889998874
No 20
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.95 E-value=2e-26 Score=210.15 Aligned_cols=150 Identities=18% Similarity=0.228 Sum_probs=118.5
Q ss_pred ccCceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC---
Q 026379 62 QSVARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG--- 136 (239)
Q Consensus 62 ~~~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~--- 136 (239)
..++++|||||||++.+|..+ .|..|.|||+.|++||+++++.|+... ++|.|||||+.||+|||+++++.++.
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~~-~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 246 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAARG-GIDAVVSSPLQRARDTAAAAAKALGLDVT 246 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhccC-CCCEEEECChHHHHHHHHHHHHhcCCCcE
Confidence 456799999999999999765 577899999999999999999998642 78999999999999999999886541
Q ss_pred ----CcceeEEEe------------ccc---c----cccCCCCccHHHHHHHHHhhhc-----CCCCeEEEEeChHHHHH
Q 026379 137 ----FLEAEVHFI------------SSF---Y----SVAAMDGQTAEHLQKAICKYSR-----DEILTVMCMGHNRGWEE 188 (239)
Q Consensus 137 ----~~~~~~~~~------------~~l---~----~~~~p~GEs~~~l~~ri~~~~~-----~~~~~vliVtH~~~i~~ 188 (239)
+.|..+..+ ++. | ...+|+||++.++.+|+..+++ ..+++|||||||++|+.
T Consensus 247 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~~~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir~ 326 (372)
T PRK07238 247 VDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADTSVAPPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIKT 326 (372)
T ss_pred ECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCCCCCCcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHHH
Confidence 111100000 000 1 1346899999999999876543 34578999999999999
Q ss_pred HHHHHhcC------CcccCCceEEEEEEeC
Q 026379 189 AASMFTGA------FIELKTCNAALLETTG 212 (239)
Q Consensus 189 l~~~l~g~------~~~~~~~si~~l~~~~ 212 (239)
++.++++. .+.+++|++++++++.
T Consensus 327 ll~~~l~~~~~~~~~~~~~~~~~s~l~~~~ 356 (372)
T PRK07238 327 LLRLALDAGPGVLYRLHLDLASLSIAEFYP 356 (372)
T ss_pred HHHHHhCCCHHHhhhcccCCceEEEEEEEC
Confidence 99999986 2468999999999964
No 21
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.94 E-value=6.2e-26 Score=181.31 Aligned_cols=135 Identities=24% Similarity=0.306 Sum_probs=110.0
Q ss_pred EEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEE
Q 026379 67 RLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHF 144 (239)
Q Consensus 67 ~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~ 144 (239)
+|||||||++.++... .++.|+|||+.|++||++++++|+...+.++.|||||+.||+|||+++++.+. ..++..
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~---~~~~~~ 77 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELP---GLPVEV 77 (153)
T ss_pred CEEEEECCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcC---CCCcee
Confidence 5899999999998765 57899999999999999999999987668999999999999999999998762 234555
Q ss_pred ecccccccCCCCccHHHHHHHHHhhhcC-CCCeEEEEeChHHHHHHHHHHhcCC------cccCCceEEEEEEeCC
Q 026379 145 ISSFYSVAAMDGQTAEHLQKAICKYSRD-EILTVMCMGHNRGWEEAASMFTGAF------IELKTCNAALLETTGK 213 (239)
Q Consensus 145 ~~~l~~~~~p~GEs~~~l~~ri~~~~~~-~~~~vliVtH~~~i~~l~~~l~g~~------~~~~~~si~~l~~~~~ 213 (239)
.+.|++ +.+.+.+.+.... .+++|+||||+++|+.++.++++.. +.+++|++++++++.+
T Consensus 78 ~~~L~e---------~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~~~ 144 (153)
T cd07067 78 DPRLRE---------ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDEDILRLNLPNGSISVLELDEN 144 (153)
T ss_pred CccchH---------HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhCCCHHHHHhcCCCCceEEEEEEeCC
Confidence 666664 2333333332222 5689999999999999999999973 5799999999999864
No 22
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.93 E-value=8.2e-25 Score=194.03 Aligned_cols=144 Identities=19% Similarity=0.144 Sum_probs=103.5
Q ss_pred CceEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcC------CCCCEEEEccHHHHHHHHHHHHHhhcCC
Q 026379 64 VARRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLG------WIPQLILSSDAVRTRQTLEIMQQHVQGF 137 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~------~~~d~i~sSpl~Ra~qTA~~l~~~~~~~ 137 (239)
..++||||||||+.++. ...+.+++||+.|++||++++++|++.. .++|+|||||+.||+|||++|++.++..
T Consensus 101 ~~~~L~LVRHGq~~~~~-~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~~~~ 179 (299)
T PTZ00122 101 HQRQIILVRHGQYINES-SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAFPGV 179 (299)
T ss_pred ceeEEEEEECCCCCCCC-CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhCCCC
Confidence 34899999999976542 1122235699999999999999999741 2789999999999999999999865322
Q ss_pred cceeEEEeccccc------------ccCCCCccHHHHHHHHHhhh----c----CCCCeEEEEeChHHHHHHHHHHhcC-
Q 026379 138 LEAEVHFISSFYS------------VAAMDGQTAEHLQKAICKYS----R----DEILTVMCMGHNRGWEEAASMFTGA- 196 (239)
Q Consensus 138 ~~~~~~~~~~l~~------------~~~p~GEs~~~l~~ri~~~~----~----~~~~~vliVtH~~~i~~l~~~l~g~- 196 (239)
++..++.|.+ ..++++|+ .++.+|+.+++ . ...+++||||||++|+.+++++++.
T Consensus 180 ---~v~~d~~LrEG~~~~~~~~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp 255 (299)
T PTZ00122 180 ---RLIEDPNLAEGVPCAPDPPSRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRYLVCRALQLP 255 (299)
T ss_pred ---CceeCcccccCCccccCccccccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHHHHHHHhCcC
Confidence 2333333311 12234444 45566655432 1 1235789999999999999999987
Q ss_pred -----CcccCCceEEEEEEeC
Q 026379 197 -----FIELKTCNAALLETTG 212 (239)
Q Consensus 197 -----~~~~~~~si~~l~~~~ 212 (239)
.+.++||++++|++++
T Consensus 256 ~~~~~~~~~~N~sit~l~~~~ 276 (299)
T PTZ00122 256 PEAWLRLSLYNCGITWIVISS 276 (299)
T ss_pred HHHHhhccCCCceEEEEEEeC
Confidence 3568999999999974
No 23
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-24 Score=182.26 Aligned_cols=149 Identities=21% Similarity=0.315 Sum_probs=121.8
Q ss_pred CceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCccee
Q 026379 64 VARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAE 141 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~ 141 (239)
.+.+++||||||++||.++ +|+.|.+||+.|.+||++++++|+..++.+|.+||||++||+|||+++++..+.. ..+
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~-~~p 82 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQK-KVP 82 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccC-Ccc
Confidence 4589999999999999988 7999999999999999999999999999999999999999999999999986511 001
Q ss_pred EE------------------------------Eecc----cccccCCCCccHHHHHHHHHhhhc-------CCCCeEEEE
Q 026379 142 VH------------------------------FISS----FYSVAAMDGQTAEHLQKAICKYSR-------DEILTVMCM 180 (239)
Q Consensus 142 ~~------------------------------~~~~----l~~~~~p~GEs~~~l~~ri~~~~~-------~~~~~vliV 180 (239)
+. ..+. ++...+|.||+..+..+|+..+.+ ..+++||||
T Consensus 83 v~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~ 162 (214)
T KOG0235|consen 83 VLYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIV 162 (214)
T ss_pred eEechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEE
Confidence 10 0111 122346789999999998765432 566899999
Q ss_pred eChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 181 GHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 181 tH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+||..+|+++.++.|. .+.++++-..+++++..
T Consensus 163 aHGnsLR~i~~~l~g~s~~~i~~~~~~t~vp~v~~ld~~ 201 (214)
T KOG0235|consen 163 AHGNSLRAIVKHLEGISDEAIKELNLPTGVPIVYELDKN 201 (214)
T ss_pred cCcHHHHHHHHHHhcCCHhhhhheecccCCceEEEcccc
Confidence 9999999999999987 35788998888888753
No 24
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.92 E-value=6.3e-25 Score=181.99 Aligned_cols=149 Identities=18% Similarity=0.231 Sum_probs=121.5
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCc----
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFL---- 138 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~---- 138 (239)
|++|+|+||||++||..+ .|+.|.+||++|++||...|+.|++.++.||.+|||-++||++|+.++.+.++...
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv~ 80 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPVI 80 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcchh
Confidence 578999999999999887 69999999999999999999999999999999999999999999999998863210
Q ss_pred ------c--------------------eeEEEecccccccCC-------------------------CCccHHHHHHHHH
Q 026379 139 ------E--------------------AEVHFISSFYSVAAM-------------------------DGQTAEHLQKAIC 167 (239)
Q Consensus 139 ------~--------------------~~~~~~~~l~~~~~p-------------------------~GEs~~~l~~ri~ 167 (239)
| .++..+..-|+..|| .+|+..+..+|+.
T Consensus 81 kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~ 160 (230)
T COG0588 81 KSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVERVL 160 (230)
T ss_pred hHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccCCCccchHHHHHHHhh
Confidence 0 011111122333333 4589999888876
Q ss_pred hhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 168 KYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 168 ~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
.+.. ..+++||||+||..||+|+.+|.+. .+.+|+|--.+++++.+
T Consensus 161 Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l~IPtg~Plvyeld~~ 219 (230)
T COG0588 161 PYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILDLNIPTGIPLVYELDKN 219 (230)
T ss_pred HHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhcccCCCCcEEEEECCC
Confidence 4321 5789999999999999999999997 47899999999999974
No 25
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.92 E-value=1.6e-24 Score=173.99 Aligned_cols=123 Identities=20% Similarity=0.228 Sum_probs=94.0
Q ss_pred EEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhc-CCCCCEEEEccHHHHHHHHHHHHHhhcC------C
Q 026379 67 RLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQL-GWIPQLILSSDAVRTRQTLEIMQQHVQG------F 137 (239)
Q Consensus 67 ~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~-~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------~ 137 (239)
+|||||||++.+|..+ .|..|.|||+.|++||+++++.|+.. ..+++.|||||+.||+|||+++++.++. +
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~L 80 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGLGEVDPRL 80 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCCCCCChhh
Confidence 5899999999998654 45599999999999999999999864 3688999999999999999999887531 1
Q ss_pred cceeEEEe----------------cccccccCCCCccHHHHHHHHHhhhc----C---CCCeEEEEeChHHHHHH
Q 026379 138 LEAEVHFI----------------SSFYSVAAMDGQTAEHLQKAICKYSR----D---EILTVMCMGHNRGWEEA 189 (239)
Q Consensus 138 ~~~~~~~~----------------~~l~~~~~p~GEs~~~l~~ri~~~~~----~---~~~~vliVtH~~~i~~l 189 (239)
.|..+... ...+...+|+||++.++..|+.+++. . ..++|||||||++|+++
T Consensus 81 ~E~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 81 RERDYGAWEGLTKEEERAKAWTRPADWLGAAPPGGESLADVVERLVRALEELIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred hhcccceecCCcHHHHHHHHHHHHhccCCCCCcCCCCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccccC
Confidence 11111000 01123346789999999999876542 1 56789999999999864
No 26
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.91 E-value=1.5e-24 Score=172.94 Aligned_cols=123 Identities=23% Similarity=0.295 Sum_probs=92.9
Q ss_pred EEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-------C
Q 026379 67 RLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG-------F 137 (239)
Q Consensus 67 ~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~-------~ 137 (239)
+|||||||++.+|..+ .++.|.|||+.|++||+.+++.|.+...+++.|||||+.||+|||+++++.++. +
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~~~~~~~~l 80 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLGIEIIVDPRL 80 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHTSEEEEEGGG
T ss_pred CEEEEECCccccccCCCcCCCCCccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhccccccccccccc
Confidence 6999999999987654 577778999999999999999999777889999999999999999999996541 1
Q ss_pred cceeEE--------------------EecccccccCCCCccHHHHHHHHHhhh------cCCCCeEEEEeChHHHHHH
Q 026379 138 LEAEVH--------------------FISSFYSVAAMDGQTAEHLQKAICKYS------RDEILTVMCMGHNRGWEEA 189 (239)
Q Consensus 138 ~~~~~~--------------------~~~~l~~~~~p~GEs~~~l~~ri~~~~------~~~~~~vliVtH~~~i~~l 189 (239)
.|.... +....+...+|+||+..++.+|+.+++ ...+++|+|||||++|++|
T Consensus 81 ~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 81 REIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp SCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred ccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 110000 000112234578999999999987643 2578899999999999976
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.91 E-value=4e-23 Score=164.01 Aligned_cols=133 Identities=20% Similarity=0.151 Sum_probs=105.4
Q ss_pred EEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEE
Q 026379 67 RLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHF 144 (239)
Q Consensus 67 ~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~ 144 (239)
+|||||||++.++..+ .++.|+|||++|++||+.+++.|+.....++.|||||+.||+|||+++++.+. ...++..
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~--~~~~~~~ 78 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLF--EGLPVEV 78 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhc--CCCCeEE
Confidence 4899999999998665 58999999999999999999999986557899999999999999999998862 1122333
Q ss_pred ecccccccCCCCccHHHHHHHHHhhhc---CCCCeEEEEeChHHHHHHHHHHhcCC------cccCCceEEEEEEeCC
Q 026379 145 ISSFYSVAAMDGQTAEHLQKAICKYSR---DEILTVMCMGHNRGWEEAASMFTGAF------IELKTCNAALLETTGK 213 (239)
Q Consensus 145 ~~~l~~~~~p~GEs~~~l~~ri~~~~~---~~~~~vliVtH~~~i~~l~~~l~g~~------~~~~~~si~~l~~~~~ 213 (239)
.++ +.+.+.+.+... ...+++++|||+++|+.++.++++.. +.+++|++.+++++..
T Consensus 79 ~~~------------~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 79 DPR------------ARVLNALLELLARHLLDGKNVLIVSHGGTIRALLAALLGLSDEEILSLNLPNGSILVLELDEC 144 (153)
T ss_pred CHH------------HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHhccccCCCCceEEEEEcCC
Confidence 222 223333333222 25689999999999999999999863 5789999999999753
No 28
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.90 E-value=2.8e-23 Score=202.08 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=110.6
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc-CCCCCEEEEccHHHHHHHHHHHHHh-----------
Q 026379 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQL-GWIPQLILSSDAVRTRQTLEIMQQH----------- 133 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~-~~~~d~i~sSpl~Ra~qTA~~l~~~----------- 133 (239)
|+|||||||||.||..+.-..|.|||+.|++||++++++|++. .+.++.|||||++||+|||+++.+.
T Consensus 420 m~i~LiRHGeT~~n~~~r~~Gd~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~~~a 499 (664)
T PTZ00322 420 MNLYLTRAGEYVDLLSGRIGGNSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQSTASAA 499 (664)
T ss_pred ceEEEEecccchhhhcCccCCCCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhcccccccccccc
Confidence 7899999999999987732238899999999999999999864 2456899999999999999999753
Q ss_pred ------hc-------CCcceeEE--------------------EecccccccCCCCccHHHHH-HHHHhhhc---CCCCe
Q 026379 134 ------VQ-------GFLEAEVH--------------------FISSFYSVAAMDGQTAEHLQ-KAICKYSR---DEILT 176 (239)
Q Consensus 134 ------~~-------~~~~~~~~--------------------~~~~l~~~~~p~GEs~~~l~-~ri~~~~~---~~~~~ 176 (239)
++ .+.|..+- +..+.+...+|+|||..++. +|+..++. ...++
T Consensus 500 ~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P~GES~~d~~~~R~~~~i~~l~~~~~~ 579 (664)
T PTZ00322 500 SSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWPNGECIHQVFNARLEPHIHDIQASTTP 579 (664)
T ss_pred ccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCCCCcCHHHHHHHHHHHHHHHHHccCCC
Confidence 10 01111110 01111233468999999865 68765432 44578
Q ss_pred EEEEeChHHHHHHHHHHhcC-----------CcccCCceEEEEEEeC
Q 026379 177 VMCMGHNRGWEEAASMFTGA-----------FIELKTCNAALLETTG 212 (239)
Q Consensus 177 vliVtH~~~i~~l~~~l~g~-----------~~~~~~~si~~l~~~~ 212 (239)
||||+||++|+.+++++++. .+.+++++++.|++.+
T Consensus 580 ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~ 626 (664)
T PTZ00322 580 VLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMVG 626 (664)
T ss_pred EEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEec
Confidence 99999999999999999983 3568899999998864
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.90 E-value=6.1e-23 Score=172.46 Aligned_cols=152 Identities=21% Similarity=0.323 Sum_probs=111.1
Q ss_pred eEEEEEcCCCCCCCCCC--CCCC-----CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCc
Q 026379 66 RRLILLRHAKSSWEFPS--LRDH-----DRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFL 138 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~--~g~~-----D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~ 138 (239)
.+|||||||++++|..+ .++. |+|||++|++||++++++|++.++.+|.|||||+.||+|||+++......
T Consensus 43 ~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~~~-- 120 (206)
T PRK06193 43 GYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRHEK-- 120 (206)
T ss_pred CEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhccccc--
Confidence 68999999999877554 3444 68999999999999999999877889999999999999999998744211
Q ss_pred ceeEEEecccccccCCCCccHHHHHHHHHhhh---cCCCCeEEEEeChHHHHHHHHHHhcCCcccCCceEEEEEEeCCcc
Q 026379 139 EAEVHFISSFYSVAAMDGQTAEHLQKAICKYS---RDEILTVMCMGHNRGWEEAASMFTGAFIELKTCNAALLETTGKSW 215 (239)
Q Consensus 139 ~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~---~~~~~~vliVtH~~~i~~l~~~l~g~~~~~~~~si~~l~~~~~~W 215 (239)
++. ..++....+.+++.+.+.+++.+++ ....++||||||++.|+.++..+.+ +.|+..+|...++
T Consensus 121 --~~~--l~~~~~~~~~~~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp~i~~l~g~~~~-----~~g~~~~~~~~~~-- 189 (206)
T PRK06193 121 --EIR--LNFLNSEPVPAERNALLKAGLRPLLTTPPDPGTNTVLVGHDDNLEAATGIYPE-----PEGEAAVFEPLGG-- 189 (206)
T ss_pred --Ccc--cccccccCCChhhHHHHHHHHHHHHhhCCCCCCeEEEEeCchHHHHHhCCCCc-----cCccEEEEEeCCC--
Confidence 111 1111111224456666666665543 3567799999999999999886544 3677777776542
Q ss_pred hhhhhccCCCceEEEEeecCCCCC
Q 026379 216 EEAFTAAGLGGWKLQGIVTPTSCT 239 (239)
Q Consensus 216 ~~~~~~~~~g~~~L~~~~~P~~~~ 239 (239)
|..++..-+.|.+|.
T Consensus 190 ---------g~~~~~~~~~~~~~~ 204 (206)
T PRK06193 190 ---------EGFKLLGNLPPEDWA 204 (206)
T ss_pred ---------CCceEeeecCHHHhc
Confidence 557888888877763
No 30
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.90 E-value=1.1e-22 Score=175.01 Aligned_cols=131 Identities=15% Similarity=0.133 Sum_probs=102.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC----------CcceeEEEec------
Q 026379 83 LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG----------FLEAEVHFIS------ 146 (239)
Q Consensus 83 ~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~----------~~~~~~~~~~------ 146 (239)
+|+.|.|||++|++||+++++.|+..+++|+.|||||+.||+|||++|++.++. +.|..+-.++
T Consensus 8 qG~~D~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~EG~~~~e 87 (236)
T PTZ00123 8 TGWTDVPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGALQGLNKSE 87 (236)
T ss_pred eCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccccCCCHHH
Confidence 688999999999999999999998766789999999999999999999876431 1111010000
Q ss_pred ---------------ccc------------------------cccCCCCccHHHHHHHHHhhhc-------CCCCeEEEE
Q 026379 147 ---------------SFY------------------------SVAAMDGQTAEHLQKAICKYSR-------DEILTVMCM 180 (239)
Q Consensus 147 ---------------~l~------------------------~~~~p~GEs~~~l~~ri~~~~~-------~~~~~vliV 180 (239)
... ...+|+|||+.++.+|+..++. ..+++||||
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~~~~vliV 167 (236)
T PTZ00123 88 TAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHIAPDILAGKKVLVA 167 (236)
T ss_pred HHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 000 0123689999999999876431 345789999
Q ss_pred eChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 181 GHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 181 tH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
|||++|++++.++++. .+.+++|++++|+++++
T Consensus 168 sHG~vir~ll~~l~~~~~~~~~~~~~~n~~~~~~~~~~~ 206 (236)
T PTZ00123 168 AHGNSLRALVKYLDKMSEEDILELNIPTGVPLVYELDEN 206 (236)
T ss_pred eCHHHHHHHHHHHhCCCHHHHhhccCCCCceEEEEECCC
Confidence 9999999999999986 35799999999999864
No 31
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.88 E-value=1.1e-21 Score=163.79 Aligned_cols=131 Identities=17% Similarity=0.104 Sum_probs=95.9
Q ss_pred eEEEEEcCCCC-CCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEE
Q 026379 66 RRLILLRHAKS-SWEFP-SLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVH 143 (239)
Q Consensus 66 ~~l~LvRHGet-~~n~~-~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~ 143 (239)
++||||||||+ .+... ...|. +|||++|++||++++++|++..+ .|.|||||+.||+|||+++++. .++.
T Consensus 55 ~~L~LiRHGet~~~~~~~~~sD~-RpLTerG~~qA~~lg~~L~~~~~-~d~I~sSpa~Ra~qTAe~ia~~------~~v~ 126 (201)
T PRK15416 55 PVVVLFRHAERCDRSDNQCLSDK-TGITVKGTQDARELGKAFSADIP-DYDLYSSNTVRTIQSATWFSAG------KKLT 126 (201)
T ss_pred CEEEEEeCccccCccCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCC-CCEEEECCCHHHHHHHHHHhcC------CCcE
Confidence 77999999999 44311 12333 89999999999999999986433 4899999999999999999862 2467
Q ss_pred EecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcCCcccCCceEEEEEEeC
Q 026379 144 FISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGAFIELKTCNAALLETTG 212 (239)
Q Consensus 144 ~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~~~~~~~~si~~l~~~~ 212 (239)
+.+++|+.. .+..+.+.+.+.+ ..+++||||||++.+..++....+.. ++++.+..+.++.
T Consensus 127 ~~~~Lye~~---~~~~~~i~~~i~~---~~~~tVLIVGHnp~i~~La~~~~~~~--~~~~~~~~l~~~~ 187 (201)
T PRK15416 127 VDKRLSDCG---NGIYSAIKDLQRK---SPDKNIVIFTHNHCLTYIAKDKRGVK--FKPDYLDALVMHV 187 (201)
T ss_pred ecHHHhhcC---chhHHHHHHHHHh---CCCCEEEEEeCchhHHHHHHHhcCCC--CCCCceEEEEEEc
Confidence 778888763 2223333444442 33489999999999999999877555 4455555555553
No 32
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.79 E-value=1.6e-18 Score=143.79 Aligned_cols=177 Identities=17% Similarity=0.202 Sum_probs=117.0
Q ss_pred Ccccc-ccccCCCcccccccccccccCCCC-CC---------ccCceEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 026379 31 NYYSS-VKREHSGRLASQSLVIETNVTGTA-ED---------QSVARRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAI 99 (239)
Q Consensus 31 ~p~~~-~~r~~~~~~~~~s~~~~~~~~~~~-~~---------~~~~~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~ 99 (239)
.|+.. .=+.+.-++.|.|++.+..-...- .+ ....+.|+||||||.... |+.+ -||+.|++||+
T Consensus 49 dp~~~g~Wd~nWD~reP~slv~~~r~~~~~EE~~~~~le~~kakatRhI~LiRHgeY~~~----g~~~-hLTelGReQAE 123 (284)
T KOG4609|consen 49 DPHAPGEWDKNWDFREPISLVDKLRNVKAGEEGKKKLLEEKKAKATRHIFLIRHGEYHVD----GSLE-HLTELGREQAE 123 (284)
T ss_pred CCCCcccccCCccccCcHHHhhhhcccCcchhhhHHHHHHhhhhhhceEEEEeccceecc----Cchh-hcchhhHHHHH
Confidence 45553 446777778888877553111100 01 234589999999998633 2333 79999999999
Q ss_pred HHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC-CcceeEEEecc--cccccCCC-------------CccHHH-H
Q 026379 100 KVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG-FLEAEVHFISS--FYSVAAMD-------------GQTAEH-L 162 (239)
Q Consensus 100 ~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~-~~~~~~~~~~~--l~~~~~p~-------------GEs~~~-l 162 (239)
.+|++|++.+++||.|+.|.+.||.|||.+|.+++++ +....-.+..+ -|+..||. |...+. +
T Consensus 124 ~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk~~s~~ll~EGaP~ppdPp~k~wrp~~~qy~rdgaRIEaaf 203 (284)
T KOG4609|consen 124 LTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLKRVSCPLLREGAPYPPDPPVKHWRPLDPQYYRDGARIEAAF 203 (284)
T ss_pred HHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCccceecccccccCCCCCCCCCcccCCccChHhhhcchHHHHHH
Confidence 9999999999999999999999999999999999862 11110111111 12222221 211221 2
Q ss_pred HHHHHhhh--cCCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeC
Q 026379 163 QKAICKYS--RDEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTG 212 (239)
Q Consensus 163 ~~ri~~~~--~~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~ 212 (239)
...+.+.. ++.+.-.|||+|+.+|+.+++..+.. .+.+.+||++-|.+..
T Consensus 204 RryfhRA~p~QeedSy~liV~HaNVIRY~icRALq~PpegWlR~nlnh~SiTWlti~P 261 (284)
T KOG4609|consen 204 RRYFHRASPSQEEDSYELIVCHANVIRYFICRALQFPPEGWLRMNLNHCSITWLTISP 261 (284)
T ss_pred HHHHhhcCcccccccEEEEEeecchhhhhhhhhhcCCcchhheecccCcceEEEEEcc
Confidence 22222221 13445689999999999999988875 4678899999888764
No 33
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.58 E-value=2.7e-14 Score=123.64 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=86.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEeccc-----------------
Q 026379 86 HDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSF----------------- 148 (239)
Q Consensus 86 ~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l----------------- 148 (239)
.|+|||..|..|++..|+.|.+.++.+|.|||||..||+|||..+.+.++......+..++.|
T Consensus 66 ~d~pit~~g~~~~~~~gr~l~~a~~~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is 145 (272)
T KOG3734|consen 66 IDPPITVSGFIQCKLIGRELLNAGIAIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFIS 145 (272)
T ss_pred cCCCccchhHHHHHHHHHHHHhcCCCcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCC
Confidence 589999999999999999999999999999999999999999999998762111222222222
Q ss_pred ------------------ccccCCCCccHHHHHHHHHhhh-----cCCCCeEEEEeChHHHHHHHHHHhcC
Q 026379 149 ------------------YSVAAMDGQTAEHLQKAICKYS-----RDEILTVMCMGHNRGWEEAASMFTGA 196 (239)
Q Consensus 149 ------------------~~~~~p~GEs~~~l~~ri~~~~-----~~~~~~vliVtH~~~i~~l~~~l~g~ 196 (239)
|...+-.+|+.+++.+|+...+ ..+.+++|||+||..+....+.+.|.
T Consensus 146 ~~el~~~~~~VD~~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~ 216 (272)
T KOG3734|consen 146 PDELKFPGFPVDLNYDPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGL 216 (272)
T ss_pred HHHHhccCCCcccccchhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCC
Confidence 1111335799999999887542 24566799999999999999999885
No 34
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.58 E-value=2.7e-14 Score=130.26 Aligned_cols=145 Identities=18% Similarity=0.204 Sum_probs=112.5
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCC-EEEEccHHHHHHHHHHHHHhh-----cCCcc
Q 026379 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQ-LILSSDAVRTRQTLEIMQQHV-----QGFLE 139 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d-~i~sSpl~Ra~qTA~~l~~~~-----~~~~~ 139 (239)
++|||.|||+++.|..+....|++|++.|.+-|+.+++++.+.. ..| .||||+.+||+|||+.+.... ..+.+
T Consensus 240 R~i~l~r~geS~~n~~griggds~ls~~g~~ya~~l~~f~~~~~-~~dl~vwts~~~rti~ta~~l~~~~~~~~~~~Lde 318 (438)
T KOG0234|consen 240 RTIYLTRHGESEFNVEGRIGGDSPLSERGSQYAKSLIKFVEEQS-SSDLDVWTSQRKRTIQTAEGLKLDYSVEQWKALDE 318 (438)
T ss_pred ceEEEEecCCCccccccccCCcccccHHHHHHHHHHHHHHhhhc-ccCceeccchHHHHhhhHhhcCcchhhhhHhhcCc
Confidence 88999999999999998888999999999999999999998754 455 999999999999999654221 11111
Q ss_pred e-----------eE------E---EecccccccCCCCccHHHHHHHHHhh---hcCCCCeEEEEeChHHHHHHHHHHhcC
Q 026379 140 A-----------EV------H---FISSFYSVAAMDGQTAEHLQKAICKY---SRDEILTVMCMGHNRGWEEAASMFTGA 196 (239)
Q Consensus 140 ~-----------~~------~---~~~~l~~~~~p~GEs~~~l~~ri~~~---~~~~~~~vliVtH~~~i~~l~~~l~g~ 196 (239)
. ++ + ...+-|....|+||+..++..|+... ++... +|+|++|..+|++|+.++++.
T Consensus 319 i~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~RlePvImElEr~~-~Vlvi~Hqavircll~Yf~~~ 397 (438)
T KOG0234|consen 319 IDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRLEPVIMELERQE-NVLVITHQAVIRCLLAYFLNC 397 (438)
T ss_pred ccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhhhhHhHhhhhcc-cEEEEecHHHHHHHHHHHhcC
Confidence 1 00 0 01123555678999999999998742 23444 499999999999999999987
Q ss_pred ------CcccCCceEEEEEEeC
Q 026379 197 ------FIELKTCNAALLETTG 212 (239)
Q Consensus 197 ------~~~~~~~si~~l~~~~ 212 (239)
.+.+|..++.++++..
T Consensus 398 ~~~e~p~l~~plhtv~~l~~~~ 419 (438)
T KOG0234|consen 398 SPVELPYLTVPLHTVIKLTPDA 419 (438)
T ss_pred CHhhcccccccceeEEEEeecc
Confidence 3578888888888763
No 35
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.55 E-value=6.2e-14 Score=116.45 Aligned_cols=69 Identities=22% Similarity=0.209 Sum_probs=60.5
Q ss_pred ceEEEEEcCCCCCCCCCCCC---------CCCCCCCHHHHHHHHHHHHHHHhcCCC--CCEEEEccHHHHHHHHHHHHHh
Q 026379 65 ARRLILLRHAKSSWEFPSLR---------DHDRPLSKAGQDDAIKVSQRLQQLGWI--PQLILSSDAVRTRQTLEIMQQH 133 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~~g---------~~D~pLt~~G~~qA~~la~~L~~~~~~--~d~i~sSpl~Ra~qTA~~l~~~ 133 (239)
-++||||||||...|+.+.. ..|.-||+.|++|+.++++.+...++. ++.|++||+.||.||+.+....
T Consensus 14 ~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~ 93 (248)
T KOG4754|consen 14 CKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGG 93 (248)
T ss_pred ceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhcc
Confidence 48999999999999987632 259999999999999999998776776 9999999999999999997654
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.03 E-value=7.6e-06 Score=70.12 Aligned_cols=60 Identities=23% Similarity=0.205 Sum_probs=50.1
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC----------CCCEEEEccHHHHHHHHHHHHHhh
Q 026379 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGW----------IPQLILSSDAVRTRQTLEIMQQHV 134 (239)
Q Consensus 66 ~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~----------~~d~i~sSpl~Ra~qTA~~l~~~~ 134 (239)
+-++++|||+-.. ..||..|++|+.++|++|++... ..-.+++|+..||+|||+.+...+
T Consensus 4 ~v~~~~RHg~r~p---------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl 73 (242)
T cd07061 4 QVQVLSRHGDRYP---------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGL 73 (242)
T ss_pred EEEEEEecCCCCc---------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhc
Confidence 5689999998753 67999999999999999986321 122799999999999999999875
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=96.25 E-value=0.0098 Score=52.59 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCC---------CCCEEEEccHHHHHHHHHHHHHhh
Q 026379 90 LSKAGQDDAIKVSQRLQQLGW---------IPQLILSSDAVRTRQTLEIMQQHV 134 (239)
Q Consensus 90 Lt~~G~~qA~~la~~L~~~~~---------~~d~i~sSpl~Ra~qTA~~l~~~~ 134 (239)
||+.|.+|...+|++|++... .--.|+||...||++||+.+...+
T Consensus 63 LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 63 LTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp BTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 999999999999999987421 112699999999999999998775
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=95.39 E-value=0.061 Score=50.13 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=50.1
Q ss_pred eEEEEEcCCCCCC-CC--CC--------CCCCCCCCCHHHHHHHHHHHHHHHh---cCCC-----C--C--EEEEccHHH
Q 026379 66 RRLILLRHAKSSW-EF--PS--------LRDHDRPLSKAGQDDAIKVSQRLQQ---LGWI-----P--Q--LILSSDAVR 122 (239)
Q Consensus 66 ~~l~LvRHGet~~-n~--~~--------~g~~D~pLt~~G~~qA~~la~~L~~---~~~~-----~--d--~i~sSpl~R 122 (239)
+.-.+.|||.-.- +. .. .+..--.||+.|.+|+.++|++|++ ...+ + + .|.||+..|
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nR 115 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNR 115 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccH
Confidence 6788999998432 11 10 1123346999999999999999998 3211 1 1 688999999
Q ss_pred HHHHHHHHHHhh
Q 026379 123 TRQTLEIMQQHV 134 (239)
Q Consensus 123 a~qTA~~l~~~~ 134 (239)
|+.||+.+...+
T Consensus 116 tl~SAqs~laGl 127 (411)
T KOG3720|consen 116 TLMSAQSVLAGL 127 (411)
T ss_pred HHHHHHHHHHhh
Confidence 999999987764
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=94.91 E-value=0.1 Score=48.69 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=47.8
Q ss_pred eEEEEEcCCCCCC---CCCC------C-----CCCCCCCCHHHHHHHHHHHHHHHhc----CC-------CC--CEEEEc
Q 026379 66 RRLILLRHAKSSW---EFPS------L-----RDHDRPLSKAGQDDAIKVSQRLQQL----GW-------IP--QLILSS 118 (239)
Q Consensus 66 ~~l~LvRHGet~~---n~~~------~-----g~~D~pLt~~G~~qA~~la~~L~~~----~~-------~~--d~i~sS 118 (239)
+-++|.|||--.. +... . .-..-.||.+|..+...+|+++++. ++ .+ -.++++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 6799999997321 1000 0 1134569999999998888877652 11 11 268999
Q ss_pred cHHHHHHHHHHHHHhh
Q 026379 119 DAVRTRQTLEIMQQHV 134 (239)
Q Consensus 119 pl~Ra~qTA~~l~~~~ 134 (239)
+..|+++||+.+...+
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999999987653
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=94.55 E-value=0.11 Score=48.63 Aligned_cols=69 Identities=17% Similarity=0.027 Sum_probs=47.9
Q ss_pred eEEEEEcCCCCCCC---C--CC---CCC-----CCCCCCHHHHHHHHHHHHHHHhcCC-----------CCC--EEEEcc
Q 026379 66 RRLILLRHAKSSWE---F--PS---LRD-----HDRPLSKAGQDDAIKVSQRLQQLGW-----------IPQ--LILSSD 119 (239)
Q Consensus 66 ~~l~LvRHGet~~n---~--~~---~g~-----~D~pLt~~G~~qA~~la~~L~~~~~-----------~~d--~i~sSp 119 (239)
+-++|.|||--.-. . .. ..+ ..-.||.+|.+|...+|+++++... ..+ .|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 56889999983211 0 00 112 2457999999999999998876421 112 678888
Q ss_pred HHHHHHHHHHHHHhh
Q 026379 120 AVRTRQTLEIMQQHV 134 (239)
Q Consensus 120 l~Ra~qTA~~l~~~~ 134 (239)
..||+.||+.+...+
T Consensus 116 ~~RTi~SAqafl~Gl 130 (436)
T PRK10172 116 DQRTRKTGEAFLAGL 130 (436)
T ss_pred chHHHHHHHHHHHhc
Confidence 899999999886653
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=94.03 E-value=0.085 Score=52.06 Aligned_cols=46 Identities=20% Similarity=0.142 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCC--------------CC-EEEEccHHHHHHHHHHHHHhh
Q 026379 89 PLSKAGQDDAIKVSQRLQQLGWI--------------PQ-LILSSDAVRTRQTLEIMQQHV 134 (239)
Q Consensus 89 pLt~~G~~qA~~la~~L~~~~~~--------------~d-~i~sSpl~Ra~qTA~~l~~~~ 134 (239)
.||..|+.||+++|++++...+. -| .||+|+..|.+.||+++++.+
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 58999999999999999874220 11 699999999999999999885
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=83.42 E-value=3.3 Score=38.96 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=39.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcC---CCCC--EEEEccHHHHHHHHHHHHHhhc
Q 026379 86 HDRPLSKAGQDDAIKVSQRLQQLG---WIPQ--LILSSDAVRTRQTLEIMQQHVQ 135 (239)
Q Consensus 86 ~D~pLt~~G~~qA~~la~~L~~~~---~~~d--~i~sSpl~Ra~qTA~~l~~~~~ 135 (239)
.+..|...|+..|.++++.+-+.. ..++ .|+++-..||.+||+.++..+.
T Consensus 129 ~~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 129 LVDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 567788899999999888775432 1222 6999999999999999998864
No 43
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=51.04 E-value=1.7e+02 Score=27.76 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCCCC--------------EEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHH
Q 026379 96 DDAIKVSQRLQQLGWIPQ--------------LILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEH 161 (239)
Q Consensus 96 ~qA~~la~~L~~~~~~~d--------------~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~ 161 (239)
.+-+++.+.|...|+ || .|+|||..-+++=.-..... .++..++.+.+.... |.+...+
T Consensus 108 ~~~E~lK~kL~aEGl-Fd~~~KkpLP~~p~~IGVITS~tgAairDIl~~~~r--R~P~~~viv~pt~VQ----G~~A~~e 180 (440)
T COG1570 108 LAFEQLKAKLAAEGL-FDPERKKPLPFFPKKIGVITSPTGAALRDILHTLSR--RFPSVEVIVYPTLVQ----GEGAAEE 180 (440)
T ss_pred HHHHHHHHHHHhCCC-cChhhcCCCCCCCCeEEEEcCCchHHHHHHHHHHHh--hCCCCeEEEEecccc----CCCcHHH
Confidence 344567777766542 22 69999987777644443333 234455665555543 2234566
Q ss_pred HHHHHHhhhcCCCCeEEEEeChH
Q 026379 162 LQKAICKYSRDEILTVMCMGHNR 184 (239)
Q Consensus 162 l~~ri~~~~~~~~~~vliVtH~~ 184 (239)
+.+.|..+-....-++|||+-||
T Consensus 181 Iv~aI~~an~~~~~DvlIVaRGG 203 (440)
T COG1570 181 IVEAIERANQRGDVDVLIVARGG 203 (440)
T ss_pred HHHHHHHhhccCCCCEEEEecCc
Confidence 77777654333435678887766
No 44
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=50.15 E-value=22 Score=30.44 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=25.3
Q ss_pred CccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHH
Q 026379 156 GQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAA 190 (239)
Q Consensus 156 GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~ 190 (239)
-++.+++++.+.+...+.+.++++|||.+.+...+
T Consensus 175 ~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 175 SKTAKEVLELLRELNKERGKTIIMVTHDPELAKYA 209 (226)
T ss_pred hHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhC
Confidence 35667777777765445577999999998766543
No 45
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=42.06 E-value=41 Score=27.26 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=27.7
Q ss_pred cHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHh
Q 026379 158 TAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFT 194 (239)
Q Consensus 158 s~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~ 194 (239)
..++.++.+.+.+....+++++|+|+-..-+++.++.
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHh
Confidence 3566667777666556677999999999999999983
No 46
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=36.63 E-value=69 Score=27.09 Aligned_cols=94 Identities=11% Similarity=0.133 Sum_probs=48.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH--HhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHH
Q 026379 84 RDHDRPLSKAGQDDAIKVSQRL--QQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEH 161 (239)
Q Consensus 84 g~~D~pLt~~G~~qA~~la~~L--~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~ 161 (239)
-...-.|++.-+++.+.++... ....-+.-.-+|. =.|-+ + .+++.+ ..+.++-..++-|..- +-.-.++
T Consensus 96 l~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSG-GqRQR--v-ALARcl--vR~~PilLLDEPFsAL--dP~LR~e 167 (231)
T COG3840 96 LSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSG-GQRQR--V-ALARCL--VREQPILLLDEPFSAL--DPALRAE 167 (231)
T ss_pred CCcccccCHHHHHHHHHHHHHhChhhHhhhCccccCc-hHHHH--H-HHHHHH--hccCCeEEecCchhhc--CHHHHHH
Confidence 3456678888777766655432 1110000111221 12211 1 233332 2344566666555432 2223567
Q ss_pred HHHHHHhhhcCCCCeEEEEeChHH
Q 026379 162 LQKAICKYSRDEILTVMCMGHNRG 185 (239)
Q Consensus 162 l~~ri~~~~~~~~~~vliVtH~~~ 185 (239)
+++.|.+...+..-++|+|||.+-
T Consensus 168 Ml~Lv~~l~~E~~~TllmVTH~~~ 191 (231)
T COG3840 168 MLALVSQLCDERKMTLLMVTHHPE 191 (231)
T ss_pred HHHHHHHHHHhhCCEEEEEeCCHH
Confidence 778787766677789999999863
No 47
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=36.53 E-value=78 Score=26.22 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=27.7
Q ss_pred CccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHh
Q 026379 156 GQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFT 194 (239)
Q Consensus 156 GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~ 194 (239)
.-..++..+++.+.+....+.+++|+|+-..-.++.++-
T Consensus 40 ~P~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~ 78 (181)
T COG3545 40 APVLDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAE 78 (181)
T ss_pred CCCHHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHH
Confidence 335677777777666555666999999987777766654
No 48
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=34.11 E-value=1.7e+02 Score=21.83 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=29.1
Q ss_pred HHHHHHHhhhc-CCCCeEEEEeC--hHHHHHHHHHHhcCCcccCCceEEEEEEeC
Q 026379 161 HLQKAICKYSR-DEILTVMCMGH--NRGWEEAASMFTGAFIELKTCNAALLETTG 212 (239)
Q Consensus 161 ~l~~ri~~~~~-~~~~~vliVtH--~~~i~~l~~~l~g~~~~~~~~si~~l~~~~ 212 (239)
++.+.+.+..+ .+...|+++|| |+.+..++...+..........+.++.|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~ 103 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA 103 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC
Confidence 34445554332 34578999999 456666666555433222245566666643
No 49
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=33.20 E-value=94 Score=27.17 Aligned_cols=40 Identities=10% Similarity=0.208 Sum_probs=23.5
Q ss_pred eEEEecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeCh
Q 026379 141 EVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHN 183 (239)
Q Consensus 141 ~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~ 183 (239)
++-+.|+.+..- +-.+..++.+.+.++-++ +.+||+|+|-
T Consensus 159 ~lllLDEP~~gv--D~~~~~~i~~lL~~l~~e-g~tIl~vtHD 198 (254)
T COG1121 159 DLLLLDEPFTGV--DVAGQKEIYDLLKELRQE-GKTVLMVTHD 198 (254)
T ss_pred CEEEecCCcccC--CHHHHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 444444444321 223456666766654334 8899999996
No 50
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=31.10 E-value=1.4e+02 Score=26.64 Aligned_cols=38 Identities=21% Similarity=0.135 Sum_probs=27.0
Q ss_pred HHHHHHHHhhh----cCCCCeEEEEeChHHHHHHHHHHhcCC
Q 026379 160 EHLQKAICKYS----RDEILTVMCMGHNRGWEEAASMFTGAF 197 (239)
Q Consensus 160 ~~l~~ri~~~~----~~~~~~vliVtH~~~i~~l~~~l~g~~ 197 (239)
+.+.+||...+ +..+.+++||+||-.-..++.++....
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~ 215 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP 215 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC
Confidence 34555555432 356677999999999998888887653
No 51
>TIGR03720 exospor_lead exosporium leader peptide. This domain is found as a leader peptide in at least two proteins targeted to the exosporium, a structure that occurs as the outermost layer of Bacillus anthracis, B. cereus, and B. thuringiensis spores. The exosporium consists of a basal layer and a nap of hair-like filaments. BclA, the major protein of the nap filaments, is targeted there by this leader peptide.
Probab=30.40 E-value=26 Score=19.43 Aligned_cols=14 Identities=21% Similarity=0.707 Sum_probs=10.9
Q ss_pred CCCCcccccchhhh
Q 026379 3 MGPTAMGSKIPNVL 16 (239)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (239)
+.|+.+|-+||+|-
T Consensus 1 l~P~lIGPTlPpip 14 (26)
T TIGR03720 1 INPNLIGPTLPPIP 14 (26)
T ss_pred CCccccCCCCCCCC
Confidence 46888888888874
No 52
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=30.20 E-value=4.6e+02 Score=24.54 Aligned_cols=79 Identities=9% Similarity=0.082 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCCCCC--------------EEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHH
Q 026379 99 IKVSQRLQQLGWIPQ--------------LILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQK 164 (239)
Q Consensus 99 ~~la~~L~~~~~~~d--------------~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ 164 (239)
+++.+.|.+.|+ || .|+|||-.-+++=.--..... .+..++.+.+.... |.+...++.+
T Consensus 105 ~~lk~~L~~eGl-fd~~~k~~lP~~p~~i~vits~~~aa~~D~~~~~~~r--~p~~~~~~~~~~vQ----G~~a~~~i~~ 177 (432)
T TIGR00237 105 EQLKEKLAAEGL-FDQEYKKPLPHFPKRVGVITSQTGAALADILHILKRR--DPSLKVVIYPTLVQ----GEGAVQSIVE 177 (432)
T ss_pred HHHHHHHHHCCC-CCchhcCCCCCCCCEEEEEeCCccHHHHHHHHHHHhh--CCCceEEEeccccc----CccHHHHHHH
Confidence 567777776553 22 699999888877555444332 22234443333322 2234556666
Q ss_pred HHHhhhcCCCCeEEEEeChH
Q 026379 165 AICKYSRDEILTVMCMGHNR 184 (239)
Q Consensus 165 ri~~~~~~~~~~vliVtH~~ 184 (239)
.|..+-....-.|+||+=||
T Consensus 178 al~~~~~~~~~dviii~RGG 197 (432)
T TIGR00237 178 SIELANTKNECDVLIVGRGG 197 (432)
T ss_pred HHHHhhcCCCCCEEEEecCC
Confidence 66644222223566666655
No 53
>PF02698 DUF218: DUF218 domain; InterPro: IPR003848 This domain of unknown function is found in several uncharacterised proteins.; PDB: 3CA8_A.
Probab=29.86 E-value=2.6e+02 Score=21.49 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEc------cHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccH
Q 026379 86 HDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSS------DAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTA 159 (239)
Q Consensus 86 ~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sS------pl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~ 159 (239)
.+..++..+.......++.+++ +.....|+|. ...-|...++.+.+. + ++...+..++.-. .+.
T Consensus 14 ~~~~~~~~~~~R~~~a~~L~~~-g~~~~il~SGg~~~~~~~~ea~~~~~~l~~~-g-vp~~~I~~e~~s~-------~T~ 83 (155)
T PF02698_consen 14 PDGQLSPESRERLDEAARLYKA-GYAPRILFSGGYGHGDGRSEAEAMRDYLIEL-G-VPEERIILEPKST-------NTY 83 (155)
T ss_dssp -------S-HHHHHHHHHHHH--HHT--EEEE--SSTTHTS-HHHHHHHHHHHT-----GGGEEEE-----------SHH
T ss_pred ccccccHhHHHHHHHHHHHHhc-CCCCeEEECCCCCCCCCCCHHHHHHHHHHhc-c-cchheeEccCCCC-------CHH
Confidence 4445666666666666666654 3344566666 344555555555544 3 4443444333211 134
Q ss_pred HHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHH
Q 026379 160 EHLQKAICKYSRDEILTVMCMGHNRGWEEAASMF 193 (239)
Q Consensus 160 ~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l 193 (239)
+.+.....-..+...++++|||+..-++-....+
T Consensus 84 ena~~~~~~~~~~~~~~iilVT~~~H~~Ra~~~~ 117 (155)
T PF02698_consen 84 ENARFSKRLLKERGWQSIILVTSPYHMRRARMIF 117 (155)
T ss_dssp HHHHHHHHHHHT-SSS-EEEE--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCeEEEECCHHHHHHHHHHH
Confidence 4444322211123447899999877555544433
No 54
>PF01094 ANF_receptor: Receptor family ligand binding region The Prosite family is a sub-family of the Pfam family; InterPro: IPR001828 This describes a ligand binding domain and includes extracellular ligand binding domains of a wide range of receptors, as well as the bacterial amino acid binding proteins of known structure [].; PDB: 3SAJ_D 3Q41_B 3QEM_C 3QEK_A 3QEL_C 3MQ4_A 3QLV_G 3OM1_A 3QLU_A 3OM0_A ....
Probab=28.97 E-value=3.7e+02 Score=23.00 Aligned_cols=102 Identities=16% Similarity=0.116 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHHHHHhh
Q 026379 90 LSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKY 169 (239)
Q Consensus 90 Lt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~ 169 (239)
+.+.-..+++.+...|+..++.--.|+.+.-.-..+.++.+.+.+.......+.. ...........+++.+.+.+
T Consensus 101 ~~p~~~~~~~a~~~~l~~~~w~~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~- 175 (348)
T PF01094_consen 101 TVPSDSSQARALVDLLKHFGWTRVSVVYSDDDYGNSLADSFQDLLRERGGICVAF----ISVVISSDSDAEELLKKLKE- 175 (348)
T ss_dssp SSB-HHHHHHHHHHHHHHTTSSEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEE----EEEEETTTSHHHHHHHHHHH-
T ss_pred ccccHHHHHHHHHHhhhcCCCceeeeeccccccccccchhhhhhhcccccceecc----cccccccccchhhhhhhhhh-
Confidence 6677788899999999987765344455554446666666665543110111111 01111233456677777776
Q ss_pred hcCCCCeEEEEeChHHHHHHHHHHhcC
Q 026379 170 SRDEILTVMCMGHNRGWEEAASMFTGA 196 (239)
Q Consensus 170 ~~~~~~~vliVtH~~~i~~l~~~l~g~ 196 (239)
.......|++.+....++.++..+...
T Consensus 176 ~~~~~rvvil~~~~~~~~~~l~~a~~~ 202 (348)
T PF01094_consen 176 IKSGARVVILCSSPEDARQFLEAAYEL 202 (348)
T ss_dssp HTTTTSEEEEESBHHHHHHHHHHHHHT
T ss_pred ccccceeeeeecccccccccccchhhh
Confidence 556677889999999999999888443
No 55
>cd06366 PBP1_GABAb_receptor Ligand-binding domain of GABAb receptors, which are metabotropic transmembrane receptors for gamma-aminobutyric acid (GABA). Ligand-binding domain of GABAb receptors, which are metabotropic transmembrane receptors for gamma-aminobutyric acid (GABA). GABA is the major inhibitory neurotransmitter in the mammalian CNS and, like glutamate and other transmitters, acts via both ligand gated ion channels (GABAa receptors) and G-protein coupled receptors (GABAb). GABAa receptors are members of the ionotropic receptor superfamily which includes alpha-adrenergic and glycine receptors. The GABAb receptor is a member of a receptor superfamily which includes the mGlu receptors. The GABAb receptor is coupled to G alpha_i proteins, and activation causes a decrease in calcium, an increase in potassium membrane conductance, and inhibition of cAMP formation. The response is thus inhibitory and leads to hyperpolarization and decreased neurotransmitter release, for example.
Probab=28.53 E-value=4e+02 Score=23.26 Aligned_cols=102 Identities=9% Similarity=0.072 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHHHHHhhh
Q 026379 91 SKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYS 170 (239)
Q Consensus 91 t~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~ 170 (239)
.+....++..+++.++..+++--.++.+...-.+..++.+.+.+.... .++.... .+. .+.+..++...+.+..
T Consensus 116 ~p~~~~~~~a~~~~~~~~~~~~v~ii~~~~~~g~~~~~~~~~~~~~~g-~~v~~~~-~~~----~~~~~~d~~~~l~~i~ 189 (350)
T cd06366 116 TPSDSSQNPAIAALLKKFGWRRVATIYEDDDYGSGGLPDLVDALQEAG-IEISYRA-AFP----PSANDDDITDALKKLK 189 (350)
T ss_pred ccchHhHHHHHHHHHHHCCCcEEEEEEEcCcccchhHHHHHHHHHHcC-CEEEEEe-ccC----CCCChhHHHHHHHHHh
Confidence 334456788888888765543234444444456666666666553211 1222211 121 2212234444444433
Q ss_pred cCCCCeEEEEeChHHHHHHHHHHhcCCc
Q 026379 171 RDEILTVMCMGHNRGWEEAASMFTGAFI 198 (239)
Q Consensus 171 ~~~~~~vliVtH~~~i~~l~~~l~g~~~ 198 (239)
....+.|++++++.....++..+....+
T Consensus 190 ~~~~dvvi~~~~~~~~~~~~~~a~~~g~ 217 (350)
T cd06366 190 EKDSRVIVVHFSPDLARRVFCEAYKLGM 217 (350)
T ss_pred cCCCeEEEEECChHHHHHHHHHHHHcCC
Confidence 3456788889999988888887765433
No 56
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=27.22 E-value=4.7e+02 Score=23.62 Aligned_cols=89 Identities=13% Similarity=0.076 Sum_probs=50.7
Q ss_pred HHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHH----HHHHhhhcCCC
Q 026379 99 IKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQ----KAICKYSRDEI 174 (239)
Q Consensus 99 ~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~----~ri~~~~~~~~ 174 (239)
.++-+..++.++ +..-+.+|..+|.+-++.|.+.++ +.+..+.-.+..- +....+++- +.+.+.+ . .
T Consensus 44 ~rlL~~Ar~~Gi-V~I~i~~~~~~~~~Le~~L~~~fg-L~~a~VVp~~~~~-----~~~~~~~lg~aaA~~l~~~l-~-~ 114 (321)
T COG2390 44 SRLLAKAREEGI-VKISINSPVEGCLELEQQLKERFG-LKEAIVVPSDSDA-----DDSILRRLGRAAAQYLESLL-K-P 114 (321)
T ss_pred HHHHHHHHHCCe-EEEEeCCCCcchHHHHHHHHHhcC-CCeEEEEcCCCCC-----chHHHHHHHHHHHHHHHHhC-C-C
Confidence 334444455553 344455899999999999999886 4433332211111 011111111 1222222 2 2
Q ss_pred CeEEEEeChHHHHHHHHHHhcC
Q 026379 175 LTVMCMGHNRGWEEAASMFTGA 196 (239)
Q Consensus 175 ~~vliVtH~~~i~~l~~~l~g~ 196 (239)
+.++-|++|-++.+++.++...
T Consensus 115 gdvigV~wGrTv~a~~~~l~~~ 136 (321)
T COG2390 115 GDVIGVGWGRTLSAVVDNLPPA 136 (321)
T ss_pred CCEEEEeccHHHHHHHHhcCcC
Confidence 3499999999999999988654
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=26.88 E-value=49 Score=28.81 Aligned_cols=41 Identities=20% Similarity=0.351 Sum_probs=26.1
Q ss_pred eEEEecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeCh
Q 026379 141 EVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHN 183 (239)
Q Consensus 141 ~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~ 183 (239)
++-..|+-|.+ -+.-+...+++.+.+...+...+|++|||.
T Consensus 150 ~lLLlDEPFgA--LDalTR~~lq~~l~~lw~~~~~TvllVTHd 190 (248)
T COG1116 150 KLLLLDEPFGA--LDALTREELQDELLRLWEETRKTVLLVTHD 190 (248)
T ss_pred CEEEEcCCcch--hhHHHHHHHHHHHHHHHHhhCCEEEEEeCC
Confidence 44444544432 234455667776666656777899999997
No 58
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc. Ferrochelatase catalyses the last step in haem biosynthesis: the chelation of a ferrous ion to proto-porphyrin IX, to form protohaem [, ]. In eukaryotic cells, it binds to the mitochondrial inner membrane with its active site on the matrix side of the membrane. The X-ray structure of Bacillus subtilis and human ferrochelatase have been solved [, ]. The human enzyme exists as a homodimer. Each subunit contains one [2Fe-2S] cluster. The monomer is folded into two similar domains, each with a four-stranded parallel beta-sheet flanked by an alpha-helix in a beta-alpha-beta motif that is reminiscent of the fold found in the periplasmic binding proteins. The topological similarity between the domains suggests that they have arisen from a gene duplication event. However, significant differences exist between the two domains, including an N-terminal section (residues 80-130) that forms part of the active site pocket, and a C-terminal extension (residues 390-423) that is involved in coordination of the [2Fe-2S] cluster and in stabilisation of the homodimer. Ferrochelatase seems to have a structurally conserved core region that is common to the enzyme from bacteria, plants and mammals. Porphyrin binds in the identified cleft; this cleft also includes the metal-binding site of the enzyme. It is likely that the structure of the cleft region will have different conformations upon substrate binding and release [].; GO: 0004325 ferrochelatase activity, 0006783 heme biosynthetic process; PDB: 2QD3_B 2HRE_C 3HCN_B 2PNJ_A 2QD1_C 1HRK_A 2QD4_B 3AQI_B 2HRC_B 3HCO_B ....
Probab=26.09 E-value=3.4e+02 Score=24.28 Aligned_cols=60 Identities=13% Similarity=0.220 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHH
Q 026379 123 TRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWE 187 (239)
Q Consensus 123 a~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~ 187 (239)
|.+|++.|++.++ +.+-.+.+.+. +...++-+-+.++.++.+.+ +..++|+||.=|-+..
T Consensus 209 ~~~t~~~i~~~l~-~~~~~~~fQS~-~g~~~WL~P~~~~~l~~l~~---~G~~~V~v~p~gFv~D 268 (316)
T PF00762_consen 209 CEETARLIAERLG-LPEWRLAFQSR-FGPGEWLGPSTEDVLEELAK---EGVKRVVVVPPGFVSD 268 (316)
T ss_dssp HHHHHHHHHHHTT-TSSEEEEEES--SSSS-BSSSBHHHHHHHHHH---CT-SEEEEEETT-SSS
T ss_pred HHHHHHHHHHHcC-CCceEEEEECC-CCCCCCccccHHHHHHHHHh---cCCCeEEEECCccccc
Confidence 8899999999986 44444445444 22233445566776666653 4568999998775443
No 59
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=25.53 E-value=3.5e+02 Score=21.62 Aligned_cols=83 Identities=18% Similarity=0.274 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHH-HhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHHHHHhhh
Q 026379 92 KAGQDDAIKVSQRL-QQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYS 170 (239)
Q Consensus 92 ~~G~~qA~~la~~L-~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~ 170 (239)
....+++...++.+ ... .+|.|+|--. ||+.|.+.+ ..|..++.. +..|+++.+.+.
T Consensus 16 ~~~~e~~v~~a~~~~~~~--g~dViIsRG~-----ta~~lr~~~-~iPVV~I~~-------------s~~Dil~al~~a- 73 (176)
T PF06506_consen 16 EASLEEAVEEARQLLESE--GADVIISRGG-----TAELLRKHV-SIPVVEIPI-------------SGFDILRALAKA- 73 (176)
T ss_dssp E--HHHHHHHHHHHHTTT--T-SEEEEEHH-----HHHHHHCC--SS-EEEE----------------HHHHHHHHHHC-
T ss_pred EecHHHHHHHHHHhhHhc--CCeEEEECCH-----HHHHHHHhC-CCCEEEECC-------------CHhHHHHHHHHH-
Confidence 33455666666766 433 4689998663 888888877 355444432 335677777754
Q ss_pred cCCCCeEEEEeChHHHH--HHHHHHhcC
Q 026379 171 RDEILTVMCMGHNRGWE--EAASMFTGA 196 (239)
Q Consensus 171 ~~~~~~vliVtH~~~i~--~l~~~l~g~ 196 (239)
.....+|.+|+|...+. ..+..++|.
T Consensus 74 ~~~~~~Iavv~~~~~~~~~~~~~~ll~~ 101 (176)
T PF06506_consen 74 KKYGPKIAVVGYPNIIPGLESIEELLGV 101 (176)
T ss_dssp CCCTSEEEEEEESS-SCCHHHHHHHHT-
T ss_pred HhcCCcEEEEecccccHHHHHHHHHhCC
Confidence 35668999999998886 344555554
No 60
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=24.16 E-value=4e+02 Score=23.93 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=57.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCC-CCEEEEccHHHHHHHHHHHHHhhcCCcceeEEE---------------ecccc
Q 026379 86 HDRPLSKAGQDDAIKVSQRLQQLGWI-PQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHF---------------ISSFY 149 (239)
Q Consensus 86 ~D~pLt~~G~~qA~~la~~L~~~~~~-~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~---------------~~~l~ 149 (239)
.+.|... ..-+..+++++++.++. -+.++.||..=+..-|+.+++.++ .+..-+.. ..+..
T Consensus 140 f~~p~~~--l~~~p~l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg-~~~~~~~k~r~~~~~~~~~~~~~~gdv~ 216 (320)
T PRK02269 140 FDIPVDH--LMGAPLIADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLK-TPIAIIDKRRSVDKMNTSEVMNIIGNVK 216 (320)
T ss_pred ccCCchh--hhhHHHHHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhC-CCEEEEEecccCCCCceeEEEEeccccC
Confidence 4445432 24445677888765432 357999999888888888888775 22110000 00000
Q ss_pred -------cccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHh
Q 026379 150 -------SVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFT 194 (239)
Q Consensus 150 -------~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~ 194 (239)
+.---.|.+.....+.+++. ......++||||-.-......+.
T Consensus 217 Gr~viIVDDIidTG~Tl~~aa~~Lk~~--GA~~V~~~~tHglf~~~a~~~l~ 266 (320)
T PRK02269 217 GKKCILIDDMIDTAGTICHAADALAEA--GATEVYASCTHPVLSGPALDNIQ 266 (320)
T ss_pred CCEEEEEeeecCcHHHHHHHHHHHHHC--CCCEEEEEEECcccCchHHHHHH
Confidence 00011355566555555531 33456689999876666666554
No 61
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=23.05 E-value=93 Score=30.16 Aligned_cols=45 Identities=13% Similarity=0.091 Sum_probs=31.8
Q ss_pred HHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcCCcccCCceEEEEEE
Q 026379 163 QKAICKYSRDEILTVMCMGHNRGWEEAASMFTGAFIELKTCNAALLET 210 (239)
Q Consensus 163 ~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~~~~~~~~si~~l~~ 210 (239)
++++.+++..-.++++||||- |.|+...+..-+.++.+.+..+.-
T Consensus 189 i~WLe~~L~~~~gtviiVSHD---R~FLd~V~t~I~~ld~g~l~~y~G 233 (530)
T COG0488 189 IEWLEDYLKRYPGTVIVVSHD---RYFLDNVATHILELDRGKLTPYKG 233 (530)
T ss_pred HHHHHHHHHhCCCcEEEEeCC---HHHHHHHhhheEEecCCceeEecC
Confidence 344555553333499999998 888888888777888886666653
No 62
>cd06362 PBP1_mGluR Ligand binding domain of the metabotropic glutamate receptors (mGluR). Ligand binding domain of the metabotropic glutamate receptors (mGluR), which are members of the family C of G-protein-coupled receptors that transduce extracellular signals into G-protein activation and ultimately into cellular responses. mGluRs bind to glutamate and function as an excitatory neurotransmitter; they are involved in learning, memory, anxiety, and the perception of pain. Eight subtypes of mGluRs have been cloned so far, and are classified into three groups according to their sequence similarities, transduction mechanisms, and pharmacological profiles. Group I is composed of mGlu1R and mGlu5R that both stimulate PLC hydrolysis. Group II includes mGlu2R and mGlu3R, which inhibit adenylyl cyclase, as do mGlu4R, mGlu6R, mGlu7R, and mGlu8R, which form group III.
Probab=21.86 E-value=6.2e+02 Score=23.16 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeEEEecccccccCCCCccHHHHHHHHHhhhc-C
Q 026379 94 GQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSR-D 172 (239)
Q Consensus 94 G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~-~ 172 (239)
-..|+..+++.++..+++--.|+.+.-.--...++.+.+.+.... ..+..... +... ++ ..++...+.+... .
T Consensus 156 d~~~~~a~~~~l~~~~w~~vaii~~~~~~G~~~~~~~~~~~~~~g-i~i~~~~~-~~~~-~~---~~d~~~~l~~l~~~~ 229 (452)
T cd06362 156 DSFQAQAMVDIVKAFNWTYVSTVASEGNYGEKGIEAFEKLAAERG-ICIAGSEK-IPSS-AT---EEEFDNIIRKLLSKP 229 (452)
T ss_pred hHHHHHHHHHHHHHCCCcEEEEEEeCCHHHHHHHHHHHHHHHHCC-eeEEEEEE-cCCC-CC---HHHHHHHHHHHhhcC
Confidence 347888888888765543333444433333455565555543111 12222111 1110 11 2344444443222 2
Q ss_pred CCCeEEEEeChHHHHHHHHHHhcC
Q 026379 173 EILTVMCMGHNRGWEEAASMFTGA 196 (239)
Q Consensus 173 ~~~~vliVtH~~~i~~l~~~l~g~ 196 (239)
..+.|+++++......++..+...
T Consensus 230 ~a~viil~~~~~~~~~~~~~a~~~ 253 (452)
T cd06362 230 NARVVVLFCREDDIRGLLAAAKRL 253 (452)
T ss_pred CCeEEEEEcChHHHHHHHHHHHHc
Confidence 346678889988888887776543
No 63
>COG4196 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.72 E-value=5.4e+02 Score=25.09 Aligned_cols=162 Identities=17% Similarity=0.140 Sum_probs=89.6
Q ss_pred CCCCCCcccccchhhhhccCCCCCCcccccCccccccccCCCccccccccccc---ccCCCCCCccCceEEEEEcCCCCC
Q 026379 1 MGMGPTAMGSKIPNVLMHNWSPPCPSIIKKNYYSSVKREHSGRLASQSLVIET---NVTGTAEDQSVARRLILLRHAKSS 77 (239)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~r~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~l~LvRHGet~ 77 (239)
||--||-++ ++|.....|.+..-+-.+..+-+.+-|....+-+|+-++.-+ -+.+++ .+.-.-.||.=--|+..
T Consensus 46 vGGePTfVs--vdn~~a~EW~t~A~gPtKRekA~~L~~RLk~~~AP~G~iH~gQGkWYpGE~-LPrW~~sLYWRtdG~Pl 122 (808)
T COG4196 46 VGGEPTFVS--VDNFEAEEWNTAAVGPTKREKASDLIARLKARWAPQGLIHYGQGKWYPGEP-LPRWQISLYWRTDGQPL 122 (808)
T ss_pred eCCcceEEE--cCccchhhhcccccCCcccccHHHHHHHHHHhhCCcceeeeccccccCCCc-CcceEEEEEEecCCccc
Confidence 455566654 488899999988888877777775555444455666655432 356666 34555678988899998
Q ss_pred CCCCC---CCCCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEEccHHHHHHHHHHHHHhhcCCcce-eEEEeccccccc
Q 026379 78 WEFPS---LRDHDRPLSKAGQDDAIKVSQRLQQ-LGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEA-EVHFISSFYSVA 152 (239)
Q Consensus 78 ~n~~~---~g~~D~pLt~~G~~qA~~la~~L~~-~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~-~~~~~~~l~~~~ 152 (239)
|.... ..+.+.|....--++|.++-..+++ .+++++.| +|. =.++++.|+++.. ++.- +++-.++.-...
T Consensus 123 Wtn~aLlad~~~a~~~~~~~~e~A~kvL~~iA~~LGl~~~~v--~~A--YeDp~~~l~~~~r-lP~~~pVd~sd~r~~~~ 197 (808)
T COG4196 123 WTNDALLADEWGAPPVDPVDDEAAYKVLAGIADGLGLPISQV--RPA--YEDPLERLAAEVR-LPAGDPVDPSDDRGCDN 197 (808)
T ss_pred ccCchhhhccccCCCCCCchHHHHHHHHHHhhcccCCChHHh--chh--hhCHHHHHHHhcc-CCCCCCCCcccccCCCC
Confidence 86543 2344555544445777766555543 34444332 221 2345666665532 2221 232222222222
Q ss_pred CCCCccHHHHHHHHHhhh
Q 026379 153 AMDGQTAEHLQKAICKYS 170 (239)
Q Consensus 153 ~p~GEs~~~l~~ri~~~~ 170 (239)
+.+.|....++.++.+.+
T Consensus 198 pd~p~~R~~l~~~~e~~l 215 (808)
T COG4196 198 PDDPEERAALLRRLEEGL 215 (808)
T ss_pred CCCHHHHHHHHHHHHhcc
Confidence 223344555666665433
No 64
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=21.67 E-value=3.4e+02 Score=24.19 Aligned_cols=94 Identities=11% Similarity=-0.030 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcceeE-------------EEecccc-------cccCCCCc
Q 026379 98 AIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAEV-------------HFISSFY-------SVAAMDGQ 157 (239)
Q Consensus 98 A~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~~-------------~~~~~l~-------~~~~p~GE 157 (239)
+..+++++++.++. +.++.||...+..=|+.+++.++ .+..-+ ....++. +.---.|.
T Consensus 145 ~~~l~~~i~~~~~~-~~vvv~pd~Gg~~~A~~la~~Lg-~~~~~~~k~r~~~~~~~~~~~~~~~~g~~vliVDDii~TG~ 222 (309)
T PRK01259 145 SPILLEDIKQKNLE-NLVVVSPDVGGVVRARALAKRLD-ADLAIIDKRRPRANVSEVMNIIGDVEGRDCILVDDMIDTAG 222 (309)
T ss_pred cHHHHHHHHhcCCC-CcEEEEECCCcHHHHHHHHHHhC-CCEEEEEeecccceeEEEEeecccCCCCEEEEEecccCcHH
Confidence 35577788665443 56899999999999999988875 211100 0000000 00011355
Q ss_pred cHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhc
Q 026379 158 TAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTG 195 (239)
Q Consensus 158 s~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g 195 (239)
+.....+.+++. ......++++|+-.-......+..
T Consensus 223 T~~~a~~~l~~~--Ga~~v~~~~tH~i~~~~a~~~l~~ 258 (309)
T PRK01259 223 TLCKAAEALKER--GAKSVYAYATHPVLSGGAIERIEN 258 (309)
T ss_pred HHHHHHHHHHcc--CCCEEEEEEEeeeCChHHHHHHhc
Confidence 555555555432 334466888998766666666543
No 65
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=21.58 E-value=4.9e+02 Score=23.38 Aligned_cols=90 Identities=11% Similarity=-0.027 Sum_probs=49.7
Q ss_pred HHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcce------------e------------EEEecccccccCC
Q 026379 99 IKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEA------------E------------VHFISSFYSVAAM 154 (239)
Q Consensus 99 ~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~------------~------------~~~~~~l~~~~~p 154 (239)
..+++++.+..-.-+.++.||..=+.+-|+.+++.++..+-. . +-+.|++. -
T Consensus 153 ~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~~~~~~gdv~Gr~viIVDDIi----d 228 (319)
T PRK04923 153 PLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLV----D 228 (319)
T ss_pred HHHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceEEEecccCCCCCEEEEEeccc----C
Confidence 345666643211135689999888888888888776411100 0 00111111 1
Q ss_pred CCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHh
Q 026379 155 DGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFT 194 (239)
Q Consensus 155 ~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~ 194 (239)
.|.+..+..+.+++. ...+..++||||-........+.
T Consensus 229 TG~Tl~~aa~~Lk~~--GA~~V~~~~THgvfs~~a~~~l~ 266 (319)
T PRK04923 229 TAGTLCAAAAALKQR--GALKVVAYITHPVLSGPAVDNIN 266 (319)
T ss_pred chHHHHHHHHHHHHC--CCCEEEEEEECcccCchHHHHHh
Confidence 356666666666532 33456789999877665555554
No 66
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=21.43 E-value=1.3e+02 Score=24.65 Aligned_cols=19 Identities=21% Similarity=0.676 Sum_probs=15.5
Q ss_pred HHHHHHhcCCCCCEEEEcc
Q 026379 101 VSQRLQQLGWIPQLILSSD 119 (239)
Q Consensus 101 la~~L~~~~~~~d~i~sSp 119 (239)
++..|++.++.||.|+..+
T Consensus 56 a~~~L~~~Gf~PDvI~~H~ 74 (171)
T PF12000_consen 56 AARQLRAQGFVPDVIIAHP 74 (171)
T ss_pred HHHHHHHcCCCCCEEEEcC
Confidence 4556777899999999987
No 67
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=20.41 E-value=1e+02 Score=26.43 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=21.9
Q ss_pred CCccHHHHHHHHHhhhcCCCCeEEEEeChH
Q 026379 155 DGQTAEHLQKAICKYSRDEILTVMCMGHNR 184 (239)
Q Consensus 155 ~GEs~~~l~~ri~~~~~~~~~~vliVtH~~ 184 (239)
+.+..+++.+.+.++....+.++++|||-.
T Consensus 170 D~~~~~~l~~~l~~L~~~~~~tii~~tHd~ 199 (235)
T COG1122 170 DPKGRRELLELLKKLKEEGGKTIIIVTHDL 199 (235)
T ss_pred CHHHHHHHHHHHHHHHhcCCCeEEEEeCcH
Confidence 345567788888876445567999999973
No 68
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=20.16 E-value=1.9e+02 Score=23.80 Aligned_cols=43 Identities=16% Similarity=0.219 Sum_probs=25.7
Q ss_pred eEEEecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHH
Q 026379 141 EVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRG 185 (239)
Q Consensus 141 ~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~ 185 (239)
++-+.|+.... .+-++.+.+.+.+.+...+.+.+|++|||...
T Consensus 165 ~lllLDEPt~~--LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 207 (228)
T cd03257 165 KLLIADEPTSA--LDVSVQAQILDLLKKLQEELGLTLLFITHDLG 207 (228)
T ss_pred CEEEecCCCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 34444444322 23456677777777653333679999999853
No 69
>COG3910 Predicted ATPase [General function prediction only]
Probab=20.14 E-value=88 Score=26.57 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=17.9
Q ss_pred HHHHHHhhhcCCCCeEEEEeChHHHHH
Q 026379 162 LQKAICKYSRDEILTVMCMGHNRGWEE 188 (239)
Q Consensus 162 l~~ri~~~~~~~~~~vliVtH~~~i~~ 188 (239)
++..+.+. .+.+..++|+||.|++-+
T Consensus 167 lla~l~~l-a~sGaQ~IiATHSPiLlA 192 (233)
T COG3910 167 LLAILRDL-ADSGAQIIIATHSPILLA 192 (233)
T ss_pred HHHHHHHH-HhcCCeEEEEecChhhee
Confidence 44455443 355678999999998754
Done!