BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026381
(239 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489827|gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 313
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/241 (80%), Positives = 226/241 (93%), Gaps = 2/241 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+YVEAD G+D+WKLEPV+ELLK+GAVGV+PTDT+YAIVCDLKS+SAIERLRRIKN+EPS
Sbjct: 73 LYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTVYAIVCDLKSNSAIERLRRIKNIEPS 132
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILC SLRDIDTYTTGFPRGDGQGHA+IFRAVKHCLPGPYTFILTASKE+PK+CVR+
Sbjct: 133 KPLSILCHSLRDIDTYTTGFPRGDGQGHADIFRAVKHCLPGPYTFILTASKELPKQCVRF 192
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GTTTAKY+ RK+VG+R+P+DAICQAIL+KMDAPLISTSV+ K+NEWM+DPVVIAD YG
Sbjct: 193 GTTTAKYASRKNVGIRMPDDAICQAILEKMDAPLISTSVRSPKENEWMIDPVVIADIYGL 252
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM--EEEDANSTAIEDLIPSA 238
EGLDFVV+GG+RVA+PSTVVDMTG+ PKIIRQGKGPKL+WM E++D ++ +EDLI SA
Sbjct: 253 EGLDFVVNGGIRVADPSTVVDMTGSSPKIIRQGKGPKLHWMVAEDDDESAFHVEDLIHSA 312
Query: 239 T 239
T
Sbjct: 313 T 313
>gi|224055737|ref|XP_002298628.1| predicted protein [Populus trichocarpa]
gi|222845886|gb|EEE83433.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/250 (78%), Positives = 225/250 (90%), Gaps = 11/250 (4%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+YVEAD G+D+WKLEPV+ELLK+GAVGV+PTDT+YAIVCDLKS+SAIERLRRIKN+EPS
Sbjct: 73 LYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTVYAIVCDLKSNSAIERLRRIKNIEPS 132
Query: 61 K---------PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASK 111
K PL ILC SLRDIDTYTTGFPRGDGQGHA+IFRAVKHCLPGPYTFILTASK
Sbjct: 133 KARNMASLHSPLYILCHSLRDIDTYTTGFPRGDGQGHADIFRAVKHCLPGPYTFILTASK 192
Query: 112 EVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDP 171
E+PK+CVRYGTTTAKY+ RK+VG+R+P+DAICQAIL+KMDAPLISTSV+ K+NEWM+DP
Sbjct: 193 ELPKQCVRYGTTTAKYASRKNVGIRMPDDAICQAILEKMDAPLISTSVRSPKENEWMIDP 252
Query: 172 VVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTA- 230
VVIAD YG EGLDFVV+GG+RVA+PSTVVDMTG+ PKIIRQGKGPKL+WM ED + +A
Sbjct: 253 VVIADIYGAEGLDFVVNGGIRVADPSTVVDMTGSSPKIIRQGKGPKLHWMVAEDDDESAF 312
Query: 231 -IEDLIPSAT 239
+EDLIPSAT
Sbjct: 313 HVEDLIPSAT 322
>gi|225451447|ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera]
gi|296082345|emb|CBI21350.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/242 (78%), Positives = 210/242 (86%), Gaps = 3/242 (1%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+YVEADPSG DSWKLEPV +LLKEGAVGV+PTDT+YAIVC L+SHSAIERLRRIK++E S
Sbjct: 65 LYVEADPSGTDSWKLEPVADLLKEGAVGVIPTDTVYAIVCHLRSHSAIERLRRIKDIEAS 124
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP G GQG NIFRAVKHCLPGPYTFILTASKE+PK+C RY
Sbjct: 125 KPLSILCRSLRDIDTYTTGFPCGIGQGQTNIFRAVKHCLPGPYTFILTASKELPKQCTRY 184
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GTTTAKY+ RK+VGVR+P+DAIC+AILQ MDAPLI+TSVK K+NEWM+DP+ IAD YGP
Sbjct: 185 GTTTAKYASRKNVGVRMPDDAICKAILQMMDAPLIATSVKSPKENEWMLDPITIADVYGP 244
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAI---EDLIPS 237
EGLDFVVDGGVRVA+PSTVVDMTG PKIIRQGKGPK WM E AI LIP
Sbjct: 245 EGLDFVVDGGVRVADPSTVVDMTGRTPKIIRQGKGPKQPWMVSESDTDFAINGENGLIPY 304
Query: 238 AT 239
AT
Sbjct: 305 AT 306
>gi|255536893|ref|XP_002509513.1| sua5, putative [Ricinus communis]
gi|223549412|gb|EEF50900.1| sua5, putative [Ricinus communis]
Length = 326
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/254 (75%), Positives = 215/254 (84%), Gaps = 15/254 (5%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRI------ 54
+YVEAD SGADSWKL+PV+ELL EGAVGV+PTDT+YA+VC LKSHSA+ERLR +
Sbjct: 73 VYVEADASGADSWKLDPVIELLNEGAVGVIPTDTVYAMVCHLKSHSAVERLRSLYLMRLF 132
Query: 55 -------KNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFIL 107
+ +PLSILCRSLRDID YTTGFPR DGQGHANIFRAVKHCLPGPYTFIL
Sbjct: 133 LILLLSLQFCHFLQPLSILCRSLRDIDIYTTGFPRSDGQGHANIFRAVKHCLPGPYTFIL 192
Query: 108 TASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEW 167
T+SKE+PK+CVRYGTTTAKY+ RK+VGVRIP+DAICQA+L+KMD PLISTSVK KDNEW
Sbjct: 193 TSSKELPKQCVRYGTTTAKYASRKNVGVRIPDDAICQAMLEKMDVPLISTSVKGPKDNEW 252
Query: 168 MVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDAN 227
M+DPVVIADTYGPEGLDFVVDGG+RVA+PSTVVDMT PKIIRQGKGPKL+WM ED N
Sbjct: 253 MIDPVVIADTYGPEGLDFVVDGGMRVADPSTVVDMTRVPPKIIRQGKGPKLHWMVAEDDN 312
Query: 228 STA--IEDLIPSAT 239
T E+LIPSA+
Sbjct: 313 ETGWHAENLIPSAS 326
>gi|356571525|ref|XP_003553927.1| PREDICTED: uncharacterized protein HI_1198-like [Glycine max]
Length = 308
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/239 (74%), Positives = 214/239 (89%), Gaps = 1/239 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+EADPS +DSWKLEP+ LLK+GAVGV+PTDT+YAIVCDL+S SAIERLRRIKN+E S
Sbjct: 69 VYIEADPSASDSWKLEPIANLLKQGAVGVIPTDTMYAIVCDLRSQSAIERLRRIKNIEAS 128
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILC S RDID YT GFPRGDGQGHAN+F+AVKH LPGPYTFIL ASKE+PK+C+R+
Sbjct: 129 KPLSILCHSFRDIDKYTAGFPRGDGQGHANLFKAVKHYLPGPYTFILIASKELPKQCIRF 188
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GT++AKY+ RK+VGVR+P+DAICQAIL++MDAPLI TS+K+ K++EWM+DPV+IADTYGP
Sbjct: 189 GTSSAKYASRKNVGVRMPDDAICQAILKEMDAPLICTSIKFQKEDEWMIDPVMIADTYGP 248
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIE-DLIPSA 238
EGLDFVVDGGVRVA+PSTVVDMT PK++RQGKGP L+WME ED T ++ DLIP+
Sbjct: 249 EGLDFVVDGGVRVADPSTVVDMTKLPPKVLRQGKGPILHWMELEDDQKTDVDKDLIPAG 307
>gi|22330801|ref|NP_566156.2| putative translation factor [Arabidopsis thaliana]
gi|6091731|gb|AAF03443.1|AC010797_19 hypothetical protein [Arabidopsis thaliana]
gi|19310491|gb|AAL84979.1| At3g1920/F28J7.25 [Arabidopsis thaliana]
gi|23505865|gb|AAN28792.1| At3g1920/F28J7.25 [Arabidopsis thaliana]
gi|332640214|gb|AEE73735.1| putative translation factor [Arabidopsis thaliana]
Length = 307
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/239 (74%), Positives = 207/239 (86%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+E DP G DSWKL+PV++LLK+GAVGV+PTDT+YAI CD K+HSA+ERLRRIK +E S
Sbjct: 69 VYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESS 128
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDT+T GFPRGDG GHAN+FRAVK CLPGPYTFILTASKE+PK+CV Y
Sbjct: 129 KPLSILCRSLRDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGY 188
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GTT+ KY+ RK+VGVRI +DA+CQAILQ+MDAPLI TSVK K+NEWM+DP I D YGP
Sbjct: 189 GTTSVKYASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGP 248
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIEDLIPSAT 239
EGLDFVVDGG+RVAEPST+VDMTG YPK+IR+GKGP L WM ED S+ +DL+ S T
Sbjct: 249 EGLDFVVDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDDESSLRQDLMASGT 307
>gi|297832740|ref|XP_002884252.1| yrdC family protein [Arabidopsis lyrata subsp. lyrata]
gi|297330092|gb|EFH60511.1| yrdC family protein [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/239 (73%), Positives = 205/239 (85%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+E DP GADSWKL+PV+ELLK+GAVGV+PTDT+YA+VCD K+HSA+ERLRRIK +E S
Sbjct: 67 VYIEVDPFGADSWKLQPVIELLKQGAVGVIPTDTVYALVCDCKNHSAVERLRRIKKIESS 126
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDT+T GFPRGD GHAN+FRAVK CLPGPYTFILTASKE+PK+CV Y
Sbjct: 127 KPLSILCRSLRDIDTFTMGFPRGDAHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGY 186
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GTT+ KY+ RK+VGVRI +D +CQAIL +MDAPLISTSVK K+NEWM+DP I D YGP
Sbjct: 187 GTTSVKYASRKYVGVRISDDPLCQAILHEMDAPLISTSVKGPKENEWMIDPTAIGDIYGP 246
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIEDLIPSAT 239
EGLDF+VDGGVRVAEPST+VDMTG YPK+IRQGKGP L WM ED + +D + S T
Sbjct: 247 EGLDFLVDGGVRVAEPSTIVDMTGPYPKVIRQGKGPILPWMVVEDNDFPLRQDFMASGT 305
>gi|449455846|ref|XP_004145661.1| PREDICTED: uncharacterized protein HI_1198-like [Cucumis sativus]
gi|449502016|ref|XP_004161520.1| PREDICTED: uncharacterized protein HI_1198-like [Cucumis sativus]
Length = 309
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/235 (75%), Positives = 207/235 (88%), Gaps = 2/235 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+YV+A+ SG D WKL+P+V LLKEGAVGV+PTDT+Y IVCDLK+ SAIER++RIKN+EP+
Sbjct: 74 IYVKAE-SGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPT 132
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRS RDID YTTGFPRGDGQGH++IFR VKHCLPGPYTFILTASKE+PK C+RY
Sbjct: 133 KPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRY 192
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
GTTTAKY+ RK+VGVRIP+D+ICQAIL+KMD PLISTSVK K+NEW++DPVVIAD YG
Sbjct: 193 GTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQ 252
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAI-EDL 234
EGLDFVVDGGVRVA+PSTVVDMT T PKI+RQGKG +L WM E + I ED+
Sbjct: 253 EGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDI 307
>gi|147841978|emb|CAN72004.1| hypothetical protein VITISV_012595 [Vitis vinifera]
Length = 329
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/251 (69%), Positives = 194/251 (77%), Gaps = 26/251 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIK----- 55
+YVEADPSG DSWKLEPV +LLKEGAVGV+PTDT+YAIVC L+SHSAIERLRR++
Sbjct: 93 LYVEADPSGTDSWKLEPVADLLKEGAVGVIPTDTVYAIVCHLRSHSAIERLRRLQLFPFM 152
Query: 56 ----NVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASK 111
+V +PLSILCRSLRDIDTYTTGFP G GQG NIFRAVKHCLPGP
Sbjct: 153 FSDVSVSLMQPLSILCRSLRDIDTYTTGFPCGIGQGQTNIFRAVKHCLPGP--------- 203
Query: 112 EVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDP 171
C RYGTTTAKY+ RK+VGVR+P+DAIC+AILQ MDAPLI+TSVK K+NEWM+DP
Sbjct: 204 -----CTRYGTTTAKYASRKNVGVRMPDDAICKAILQMMDAPLIATSVKSPKENEWMLDP 258
Query: 172 VVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAI 231
+ IAD YGPEGLDFVVDGGVRVA+PSTVVDMTG PKIIRQGKGPK WM E AI
Sbjct: 259 ITIADVYGPEGLDFVVDGGVRVADPSTVVDMTGRTPKIIRQGKGPKQPWMVSESDTDFAI 318
Query: 232 ---EDLIPSAT 239
LIP AT
Sbjct: 319 NGENGLIPYAT 329
>gi|357142058|ref|XP_003572445.1| PREDICTED: uncharacterized protein yciO-like [Brachypodium
distachyon]
Length = 348
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/231 (67%), Positives = 197/231 (85%), Gaps = 3/231 (1%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ V+ +PSG D WKL+P+V+L+ GAVGV+PTDT+Y+IVCDL ++ +IERLRRIK + S
Sbjct: 113 LRVKVEPSGEDFWKLDPIVDLINRGAVGVIPTDTVYSIVCDLSNNDSIERLRRIKGIVNS 172
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP G QG ANIFRAVK LPGPYTFIL A+KE+PK+C+++
Sbjct: 173 KPLSILCRSLRDIDTYTTGFPLGTNQGQANIFRAVKRVLPGPYTFILPATKELPKQCIKH 232
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVRIP+D+ICQAILQ ++ PLI TSVK+L ++EW++DPV IAD Y P
Sbjct: 233 GSST-RYAKRRQVGVRIPDDSICQAILQNLEEPLICTSVKYLSEDEWILDPVTIADIYEP 291
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM--EEEDANST 229
+GLDF+VDGGVR+A+PSTVVDM G+YP IIRQGKGPKL WM E++DA ST
Sbjct: 292 QGLDFIVDGGVRIADPSTVVDMAGSYPTIIRQGKGPKLDWMVAEDQDAQST 342
>gi|115477475|ref|NP_001062333.1| Os08g0531300 [Oryza sativa Japonica Group]
gi|42407889|dbj|BAD09030.1| translation factor-like [Oryza sativa Japonica Group]
gi|42761369|dbj|BAD11637.1| translation factor-like [Oryza sativa Japonica Group]
gi|113624302|dbj|BAF24247.1| Os08g0531300 [Oryza sativa Japonica Group]
gi|222640922|gb|EEE69054.1| hypothetical protein OsJ_28055 [Oryza sativa Japonica Group]
Length = 313
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 192/225 (85%), Gaps = 1/225 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ V+ +PSG D+WKLEPVVEL+ GAVG++PTDT+Y+IVCDL ++ ++ERLRRIK + S
Sbjct: 76 LRVQVEPSGEDAWKLEPVVELINRGAVGIIPTDTVYSIVCDLSNNDSVERLRRIKGIGDS 135
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFPRG QG ANIFRAVK +PGPYTFIL A+KE+PK+C+R+
Sbjct: 136 KPLSILCRSLRDIDTYTTGFPRGTNQGQANIFRAVKRVIPGPYTFILPATKELPKQCIRH 195
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVR+P+D IC+AILQ +D PLI TSVK L ++EW++DPV+IAD Y
Sbjct: 196 GSST-RYAKRRQVGVRLPDDPICEAILQNLDEPLICTSVKSLSEDEWILDPVIIADIYEQ 254
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+GLDF+VDGG R+A+PSTVVDMTG+YP IIRQGKGPKL WM ED
Sbjct: 255 QGLDFIVDGGTRIADPSTVVDMTGSYPTIIRQGKGPKLDWMVAED 299
>gi|218201509|gb|EEC83936.1| hypothetical protein OsI_30017 [Oryza sativa Indica Group]
Length = 314
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 192/225 (85%), Gaps = 1/225 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ V+ +PSG D+WKLEPVVEL+ GAVG++PTDT+Y+IVCDL ++ ++ERLRRIK + S
Sbjct: 77 LRVQVEPSGEDAWKLEPVVELINRGAVGIIPTDTVYSIVCDLSNNDSVERLRRIKGIGDS 136
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFPRG QG ANIFRAVK +PGPYTFIL A+KE+PK+C+R+
Sbjct: 137 KPLSILCRSLRDIDTYTTGFPRGTNQGQANIFRAVKRVIPGPYTFILPATKELPKQCIRH 196
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVR+P+D IC+AILQ +D PLI TSVK L ++EW++DPV+IAD Y
Sbjct: 197 GSST-RYAKRRQVGVRLPDDPICEAILQNLDEPLICTSVKSLSEDEWILDPVIIADIYEQ 255
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+GLDF+VDGG R+A+PSTVVDMTG+YP IIRQGKGPKL WM ED
Sbjct: 256 QGLDFIVDGGTRIADPSTVVDMTGSYPTIIRQGKGPKLDWMVAED 300
>gi|242082095|ref|XP_002445816.1| hypothetical protein SORBIDRAFT_07g026230 [Sorghum bicolor]
gi|241942166|gb|EES15311.1| hypothetical protein SORBIDRAFT_07g026230 [Sorghum bicolor]
Length = 312
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/233 (65%), Positives = 191/233 (81%), Gaps = 6/233 (2%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ VE +PSG D WKL+P+++L+ GAVGV+PTDT+Y+IVCDL ++ +IERLRR+K + S
Sbjct: 74 LRVEVEPSGEDFWKLDPIIDLINRGAVGVIPTDTVYSIVCDLSNNESIERLRRLKGIGDS 133
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFPRG QG ANIFRAVK +PGPYTFIL A+K+ PK+C+++
Sbjct: 134 KPLSILCRSLRDIDTYTTGFPRGTNQGQANIFRAVKRAIPGPYTFILPATKQFPKQCIKH 193
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVRIP+D ICQAILQ +D PLI TSVK+L ++EW++DPV+IAD Y P
Sbjct: 194 GSST-RYAKRRQVGVRIPDDPICQAILQNLDEPLICTSVKYLSEDEWILDPVIIADLYEP 252
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM-----EEEDANS 228
GLDF+VDGG R+A+PSTVVDM GT P IIRQGKGP L WM EEE+ S
Sbjct: 253 LGLDFIVDGGPRIADPSTVVDMMGTNPTIIRQGKGPMLDWMVAKDEEEEETQS 305
>gi|326522757|dbj|BAJ88424.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 187/221 (84%), Gaps = 1/221 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ +PSG D WKL+PVV+L+ GAVGV+PTDT+Y+IVCDL ++ +IERLRRIK + S
Sbjct: 93 MRVQVEPSGEDFWKLDPVVDLINSGAVGVIPTDTVYSIVCDLSNNDSIERLRRIKGIVNS 152
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP+G QG ANIFRAVK LPGPYTFIL A+KE+PK+C+++
Sbjct: 153 KPLSILCRSLRDIDTYTTGFPQGTNQGQANIFRAVKRILPGPYTFILPATKELPKQCIKH 212
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVR+P+D ICQAILQ ++ PLI TSVK L ++EW++DPV IAD Y P
Sbjct: 213 GSST-RYAKRRQVGVRMPDDPICQAILQNLEEPLICTSVKNLTEDEWILDPVTIADIYEP 271
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
GLDF+VDGG R+A+PSTVVDMTG+YP IIRQGKG KL WM
Sbjct: 272 LGLDFIVDGGARIADPSTVVDMTGSYPTIIRQGKGAKLDWM 312
>gi|293337061|ref|NP_001168939.1| uncharacterized protein LOC100382753 [Zea mays]
gi|223973863|gb|ACN31119.1| unknown [Zea mays]
gi|413921641|gb|AFW61573.1| hypothetical protein ZEAMMB73_856618 [Zea mays]
Length = 306
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 188/229 (82%), Gaps = 5/229 (2%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ VE +PSG D WKL+P+++L+ GAVGV+PTDT+Y++VCDL ++ +IERLRR+K + S
Sbjct: 68 LRVEVEPSGGDFWKLDPIIDLINRGAVGVIPTDTVYSVVCDLSNNESIERLRRLKGIGDS 127
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP+G QG ANIFR VK +PGPYTFIL ASK+ PK+C+++
Sbjct: 128 KPLSILCRSLRDIDTYTTGFPQGTNQGQANIFRVVKRAIPGPYTFILPASKQFPKQCIKH 187
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVRIP+D ICQAILQ +D PLI TSVK+L ++EW++DPV+IAD Y P
Sbjct: 188 GSST-RYAKRRQVGVRIPDDPICQAILQNLDEPLICTSVKYLSEDEWILDPVIIADLYEP 246
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM----EEED 225
GLDF+VDGG R+A+PSTVVDM G P +IRQGKG KL WM EEED
Sbjct: 247 LGLDFIVDGGPRIADPSTVVDMMGANPTVIRQGKGLKLDWMVAKDEEED 295
>gi|413921639|gb|AFW61571.1| hypothetical protein ZEAMMB73_856618 [Zea mays]
Length = 317
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 188/229 (82%), Gaps = 5/229 (2%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ VE +PSG D WKL+P+++L+ GAVGV+PTDT+Y++VCDL ++ +IERLRR+K + S
Sbjct: 79 LRVEVEPSGGDFWKLDPIIDLINRGAVGVIPTDTVYSVVCDLSNNESIERLRRLKGIGDS 138
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP+G QG ANIFR VK +PGPYTFIL ASK+ PK+C+++
Sbjct: 139 KPLSILCRSLRDIDTYTTGFPQGTNQGQANIFRVVKRAIPGPYTFILPASKQFPKQCIKH 198
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVRIP+D ICQAILQ +D PLI TSVK+L ++EW++DPV+IAD Y P
Sbjct: 199 GSST-RYAKRRQVGVRIPDDPICQAILQNLDEPLICTSVKYLSEDEWILDPVIIADLYEP 257
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM----EEED 225
GLDF+VDGG R+A+PSTVVDM G P +IRQGKG KL WM EEED
Sbjct: 258 LGLDFIVDGGPRIADPSTVVDMMGANPTVIRQGKGLKLDWMVAKDEEED 306
>gi|168035903|ref|XP_001770448.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678325|gb|EDQ64785.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 181/232 (78%), Gaps = 5/232 (2%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
V+ DPSG+D W+L+P+VEL+K GAVG++PTDT+YAIVCDLK+ AI+RL RIKN++P KP
Sbjct: 47 VQLDPSGSDVWRLDPLVELIKSGAVGIIPTDTVYAIVCDLKNRQAIDRLYRIKNMDPMKP 106
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
LSILCRS +DID YT GFPRG+ G N+FRA + LPGPYTFIL ASKE+PK+C +G
Sbjct: 107 LSILCRSFQDIDKYTLGFPRGNSHGQTNVFRAARQSLPGPYTFILPASKEMPKQCTTFGG 166
Query: 123 TTA-KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP- 180
++A + RK VGVR+P+D IC +L+++D PL+ TSV+ ++EWM+DPV+IADTYG
Sbjct: 167 SSAVSCAPRKSVGVRMPDDVICAELLKRLDEPLLCTSVRQRSEDEWMLDPVIIADTYGAS 226
Query: 181 ---EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANST 229
EG+DFV+DGG R+A PSTV+DMTG P I+R+GKGP WM E +ST
Sbjct: 227 EGREGVDFVIDGGERLAYPSTVIDMTGEKPIILRRGKGPVEEWMLMESHDST 278
>gi|6513939|gb|AAF14843.1|AC011664_25 hypothetical protein [Arabidopsis thaliana]
Length = 297
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 176/243 (72%), Gaps = 18/243 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRR--IKNVE 58
+Y+E DP G DSWKL+PV++LLK+GAVGV+PTDT+YAI CD K+HSA+ERLR
Sbjct: 69 VYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRSHLASYAV 128
Query: 59 PSKPLSILCRSLRDIDTYT--TGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKK 116
P + L++L + + T F + +N + YTFILTASKE+PK+
Sbjct: 129 PYEILTLLQWAFLVVMVMVMLTFF-----ELSSNAYL---------YTFILTASKELPKQ 174
Query: 117 CVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD 176
CV YGTT+ KY+ RK+VGVRI +DA+CQAILQ+MDAPLI TSVK K+NEWM+DP I D
Sbjct: 175 CVGYGTTSVKYASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGD 234
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIEDLIP 236
YGPEGLDFVVDGG+RVAEPST+VDMTG YPK+IR+GKGP L WM ED S+ +DL+
Sbjct: 235 IYGPEGLDFVVDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDDESSLRQDLMA 294
Query: 237 SAT 239
S T
Sbjct: 295 SGT 297
>gi|413921640|gb|AFW61572.1| hypothetical protein ZEAMMB73_856618 [Zea mays]
Length = 284
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/183 (63%), Positives = 153/183 (83%), Gaps = 1/183 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ VE +PSG D WKL+P+++L+ GAVGV+PTDT+Y++VCDL ++ +IERLRR+K + S
Sbjct: 79 LRVEVEPSGGDFWKLDPIIDLINRGAVGVIPTDTVYSVVCDLSNNESIERLRRLKGIGDS 138
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP+G QG ANIFR VK +PGPYTFIL ASK+ PK+C+++
Sbjct: 139 KPLSILCRSLRDIDTYTTGFPQGTNQGQANIFRVVKRAIPGPYTFILPASKQFPKQCIKH 198
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
G++T +Y+ R+ VGVRIP+D ICQAILQ +D PLI TSVK+L ++EW++DPV+IAD Y P
Sbjct: 199 GSST-RYAKRRQVGVRIPDDPICQAILQNLDEPLICTSVKYLSEDEWILDPVIIADLYEP 257
Query: 181 EGL 183
GL
Sbjct: 258 LGL 260
>gi|302791063|ref|XP_002977298.1| hypothetical protein SELMODRAFT_176163 [Selaginella moellendorffii]
gi|300154668|gb|EFJ21302.1| hypothetical protein SELMODRAFT_176163 [Selaginella moellendorffii]
Length = 297
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 166/222 (74%), Gaps = 10/222 (4%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++E D G++ WKL+ VV LL++G VGVVPTDT+YAIVCDL + +AIERL RIK+++
Sbjct: 72 FHLEIDQFGSNLWKLDQVVSLLQDGGVGVVPTDTIYAIVCDLHNRAAIERLYRIKDMDAK 131
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRS +DID YTTGFP + FR + CLPGPYTFIL ASK++PK+C R+
Sbjct: 132 KPLSILCRSFQDIDKYTTGFP-------TSFFRVARQCLPGPYTFILPASKDMPKQCTRF 184
Query: 121 -GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
G+ A Y+ RK VGVRIP+DA+ + + +++ PL+ TSV+ D+EWM+DP +IADTYG
Sbjct: 185 GGSVAASYAPRKSVGVRIPDDAVWREMAGQLEHPLLCTSVRRPADDEWMLDPAIIADTYG 244
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+DF+VDGG RVA PSTVVDMTGT P ++R+GKG WM
Sbjct: 245 --SVDFIVDGGTRVANPSTVVDMTGTMPVVLRRGKGVLEDWM 284
>gi|302780313|ref|XP_002971931.1| hypothetical protein SELMODRAFT_441705 [Selaginella moellendorffii]
gi|300160230|gb|EFJ26848.1| hypothetical protein SELMODRAFT_441705 [Selaginella moellendorffii]
Length = 303
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/226 (56%), Positives = 167/226 (73%), Gaps = 12/226 (5%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++E D G++ WKL+ VV LL++G VGVVPTDT+YAIVCDL + +AIERL RIK+++
Sbjct: 72 FHLEIDQFGSNLWKLDQVVSLLQDGGVGVVPTDTIYAIVCDLHNRAAIERLYRIKDMDAK 131
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRS +DID YTTGFP + FR + CLPGPYTFIL ASK++PK+C R+
Sbjct: 132 KPLSILCRSFQDIDKYTTGFP-------TSFFRVARQCLPGPYTFILPASKDMPKQCTRF 184
Query: 121 -GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTY- 178
G+ A Y+ RK VGVRIP+D++ + + +++ PL+ TSV+ D+EWM+DP +IADTY
Sbjct: 185 GGSVAASYAPRKSVGVRIPDDSVWREMAGQLEHPLLCTSVRRPADDEWMLDPAIIADTYG 244
Query: 179 ---GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
G E +DF+VDGG RVA PSTVVDMTGT P ++R+GKG WM
Sbjct: 245 VSSGRESVDFIVDGGTRVANPSTVVDMTGTMPVVLRRGKGVLEDWM 290
>gi|326513584|dbj|BAJ87811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 133/157 (84%), Gaps = 1/157 (0%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ +PSG D WKL+PVV+L+ GAVGV+PTDT+Y+IVCDL ++ +IERLRRIK + S
Sbjct: 94 MRVQVEPSGEDFWKLDPVVDLINSGAVGVIPTDTVYSIVCDLSNNDSIERLRRIKGIVNS 153
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILCRSLRDIDTYTTGFP+G QG ANIFRAVK LPGPYTFIL A+KE+PK+C+++
Sbjct: 154 KPLSILCRSLRDIDTYTTGFPQGTNQGQANIFRAVKRILPGPYTFILPATKELPKQCIKH 213
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLIST 157
G++T +Y+ R+ VGVR+P+D ICQAILQ ++ PLI T
Sbjct: 214 GSST-RYAKRRQVGVRMPDDPICQAILQNLEEPLICT 249
>gi|307110462|gb|EFN58698.1| hypothetical protein CHLNCDRAFT_17175, partial [Chlorella
variabilis]
Length = 215
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTL-YAIVCDLKSHSAIERLRRIKNVEPS 60
+V+ +P G+D+W+LEPV+E LKEGAVG++PT T A VCDL + SA+E+L IK S
Sbjct: 1 FVQVEPDGSDAWRLEPVIEALKEGAVGIIPTGTCNLAFVCDLGNRSAVEKLLEIKGARGS 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+ +SILCRSL+D+D YT G+P G ++F+ VK LPGPYTFIL A KE+PK
Sbjct: 61 QRMSILCRSLQDVDAYTQGWPPSRAPGQPDMFKLVKRVLPGPYTFILLAGKELPKALTN- 119
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLI-STSVKWLKDNEWM-VDPVVIADTY 178
K R+ VGVR+P+DA+ QAILQ++D PL+ ST+ D M D V+ D Y
Sbjct: 120 -VDKGKSKKRREVGVRLPDDAVAQAILQQLDRPLLCSTAATGPGDGAIMGQDAAVLMDRY 178
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
G GLDFVVD G R+AE STV+D TG P ++RQGKG
Sbjct: 179 GRAGLDFVVDAGPRLAEGSTVIDCTGAEPVVLRQGKG 215
>gi|384253330|gb|EIE26805.1| hypothetical protein COCSUDRAFT_64663 [Coccomyxa subellipsoidea
C-169]
Length = 284
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 152/217 (70%), Gaps = 7/217 (3%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+ + G+D W+L+PV+++LKEGA+G++PTDT A+VCD+++ A+ERL K++EP+
Sbjct: 61 LYITVEKDGSDIWRLDPVIKMLKEGAMGILPTDTYPALVCDIEARKAVERLYAAKDMEPT 120
Query: 61 KPLSILCRSLRDIDTYTTGFPRGD-GQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSIL R+ DI+TYT GFP + GQ + FR + LPGPYT IL ASK +PK+CV
Sbjct: 121 KQLSILVRNYADINTYTLGFPSTELGQ---DTFRLARRALPGPYTLILHASKAMPKQCVD 177
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV-DPVVIADTY 178
+ T K R+ VGVR+P D +CQA+LQ+++ PL+STSV + E + + V+ D +
Sbjct: 178 F--LTGKSKPRRTVGVRMPGDTLCQAVLQELERPLLSTSVHVEAEGELEIPEGAVMMDMF 235
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLDFVVD G R+AE ST++D+T P +IRQGKG
Sbjct: 236 AGRGLDFVVDCGTRIAEGSTIIDLTEREPTLIRQGKG 272
>gi|303279452|ref|XP_003059019.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460179|gb|EEH57474.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 245
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 147/235 (62%), Gaps = 5/235 (2%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++V +P +D W+L+ + ++++ G VG++PTDT YA V DL+S A++ L R+K+
Sbjct: 10 LFVTVEPDASDDWRLDEIADVIRGGGVGIIPTDTKYAFVADLESRDAVQTLYRLKDAGVG 69
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP+S+L R DID YT GFP G F+ + CLPGPYTFIL A K +PK C++
Sbjct: 70 KPMSVLVRGFSDIDAYTQGFPDNVVAGRTQPFKLARQCLPGPYTFILQAGKAMPKICLQD 129
Query: 121 GTTTAKY-SLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
+T +K RK VGVR D +C+A+L ++D PL++++V D E+ DP V+ D
Sbjct: 130 PSTKSKSCKARKTVGVRFSADPVCRALLSRLDRPLLASTVPCEVDGDGIEYAQDPAVMCD 189
Query: 177 TYGPEG-LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTA 230
Y EG L FV+D GVR PSTV+D++G K++R+G G W+E+++ + A
Sbjct: 190 DYESEGLLAFVIDCGVRENPPSTVIDLSGGAAKLLRRGAGDASAWVEDDEEETLA 244
>gi|255082207|ref|XP_002508322.1| predicted protein [Micromonas sp. RCC299]
gi|226523598|gb|ACO69580.1| predicted protein [Micromonas sp. RCC299]
Length = 236
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 140/229 (61%), Gaps = 4/229 (1%)
Query: 9 GADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCR 68
G+D W+L+ V + ++ G+VG++PTD+ YA V DL+S ++ L +K + KP+SILC
Sbjct: 3 GSDEWRLDDVADAIRAGSVGIIPTDSRYAFVVDLESRDGVQTLYDLKGAKDYKPMSILCA 62
Query: 69 SLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKY- 127
DID YT GFP G F+ + CLPGPYTFIL A K++PK C+ + +K
Sbjct: 63 GFSDIDRYTQGFPDNVVAGRQQPFKLARKCLPGPYTFILNAGKDMPKVCLLDPRSKSKNC 122
Query: 128 SLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEW---MVDPVVIADTYGPEGLD 184
RK VGVR+P+ + A+L ++D PL+ SV L+ + + + DPV++ D Y GL
Sbjct: 123 KARKTVGVRVPSHPVTAALLARLDRPLLCGSVPNLEADTYDDDVQDPVLMLDEYERRGLG 182
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIED 233
F+VD GV STV+D++ P+++R+G G W++++D + + +D
Sbjct: 183 FLVDCGVMRNPGSTVIDLSKGKPQLVRRGAGDHSLWVDDDDDPTLSSDD 231
>gi|145349506|ref|XP_001419173.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579404|gb|ABO97466.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 244
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 143/241 (59%), Gaps = 13/241 (5%)
Query: 1 MYVEADPSG----ADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKN 56
MYV+ D + WKL+ V E ++ G VG +PTDT YA V DL + A+++L IK+
Sbjct: 1 MYVDIDLVNVGLEGEMWKLDQVAEAIRRGEVGAIPTDTKYAFVADLTNADAVQKLYDIKD 60
Query: 57 VEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKK 116
+KPLSILCR DID YTTGFP G F+ K CLPGPYTFIL ASKE+PK
Sbjct: 61 AGLNKPLSILCRGFADIDAYTTGFPNNPKPGATLPFKLAKQCLPGPYTFILPASKELPKV 120
Query: 117 CVRYGTTTAKYSL---RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVV 173
C+ +T K RK VGVRIP + +A+L +DAPL+ ++V D +P V
Sbjct: 121 CLVDKSTKDKARQCKSRKTVGVRIPACEVTRALLDLLDAPLMCSTVPECDD-----EPAV 175
Query: 174 IADTYGPEGLDFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTAIE 232
I DTY P GL F+VD G R +A STVVD++ P+++R+G G W +DA+ +
Sbjct: 176 IHDTYLPRGLGFIVDIGERQMAAASTVVDLSAGEPRVLRRGAGDPDLWASGDDASESVEN 235
Query: 233 D 233
D
Sbjct: 236 D 236
>gi|308807076|ref|XP_003080849.1| translation factor-like (ISS) [Ostreococcus tauri]
gi|116059310|emb|CAL55017.1| translation factor-like (ISS) [Ostreococcus tauri]
Length = 308
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 142/235 (60%), Gaps = 15/235 (6%)
Query: 1 MYVEADPS----GADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKN 56
M+VE D + WKL+ V E ++ GAVG +PTDT YA V D+ + SA+++L IK
Sbjct: 66 MFVEMDLDLVGLEGERWKLDAVAEAIRRGAVGAIPTDTKYAFVADMSNASAVQKLYDIKG 125
Query: 57 VEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKK 116
+KPLSILCR DID YTTGFP+ G F+ K CLPGPYTFIL ASKE+PK
Sbjct: 126 CGYNKPLSILCRGFADIDAYTTGFPKNVKPGETLPFKLAKKCLPGPYTFILPASKELPKV 185
Query: 117 CVRYGTTTAKYSL---RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVV 173
C+ +T K RK VGVRIP+ + +A+L +DAPL+ ++V D +P V
Sbjct: 186 CLGDNSTKEKAKQCKSRKTVGVRIPDCDVTRALLDLLDAPLMCSTVPECDD-----EPAV 240
Query: 174 IADTYGPEGLDFVVDGGVRVAEP-STVVDMTGTYPKIIRQGKGPKLYW--MEEED 225
I D Y GL F++D G R A STVVD++ P+I+R+G G W ++EE+
Sbjct: 241 IYDEYLSRGLGFMIDTGERRASAASTVVDLSSGEPRILRRGAGDPNVWSSIDEEE 295
>gi|159462480|ref|XP_001689470.1| translation factor [Chlamydomonas reinhardtii]
gi|158283458|gb|EDP09208.1| translation factor [Chlamydomonas reinhardtii]
Length = 278
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 8/218 (3%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ V +P +++W+L+ VV+L+K G VGV+PTDTL AIVCDL + A+ RL +K ++
Sbjct: 60 LVVHVEPDASNAWRLDEVVQLIKAGGVGVIPTDTLPAIVCDLHNRDAVLRLYSVKEMDAR 119
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLSILC SL I TYTT AN F + LPGPYTF+L A+K +P +C+ +
Sbjct: 120 KPLSILCPSLSTITTYTT---GFPTTASANWFNVARRLLPGPYTFVLPATKNLPPQCIDF 176
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV---KWLKDNEWMVDPVVIADT 177
+ K RK VGVR+P DA+CQA+L + L+ TSV + L + + D I +
Sbjct: 177 --MSGKNIHRKSVGVRMPADAVCQALLDGVGGALLCTSVHVPEVLSPDTEVPDCGSILEA 234
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
YG +G+DFVVD G RV S+VVD T P+++RQG+G
Sbjct: 235 YGSKGIDFVVDVGRRVVVESSVVDFTSGDPEVLRQGQG 272
>gi|412994185|emb|CCO14696.1| Sua5/YciO/YrdC/YwlC family protein [Bathycoccus prasinos]
Length = 271
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 13/220 (5%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
LE +LL+ G VG++PTDT Y+ V DL + AI+ L IK ++ +KPLSILCR +DID
Sbjct: 45 LEECADLLRRGGVGIIPTDTKYSFVADLNNKDAIQNLYTIKGIDSNKPLSILCRGFQDID 104
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCV-----RYGTTTAKYSL 129
TYT GFP G A+ F+ + CLPGPYTFIL ASK +PK C+ T +K
Sbjct: 105 TYTLGFPPATRPGMADPFKLARKCLPGPYTFILPASKSLPKICLLDTSSAGHTRLSKCQQ 164
Query: 130 RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDG 189
RK +G R+P+ + A+L +DAPL+ ++V + D V P+V+ D Y FV+D
Sbjct: 165 RKTIGCRLPDCEVTLALLDLLDAPLMCSTVPFDGD----VQPIVMRDEY--SRCAFVLDA 218
Query: 190 GVRVAE-PSTVVDMT-GTYPKIIRQGKGPKLYWMEEEDAN 227
G + STV+D++ G PK++R G G W E+ D +
Sbjct: 219 GTDAEQLASTVIDLSIGDVPKVLRVGAGDASVWSEDGDVH 258
>gi|117925136|ref|YP_865753.1| translation factor SUA5 [Magnetococcus marinus MC-1]
gi|117608892|gb|ABK44347.1| translation factor SUA5 [Magnetococcus marinus MC-1]
Length = 206
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 18/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + L ++L+EG V V PTDT Y + C + + +ER+ RIK + +
Sbjct: 4 YFKIHPENPQARLLRQAAQILQEGGVIVYPTDTTYGLGCVMSNRKGVERVVRIKQLSDTH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LC L DI Y R D + +R +K LPGPYTF+L AS+EVPKK +
Sbjct: 64 QLTLLCADLSDIANYA----RVDN----SCYRLLKRFLPGPYTFVLEASREVPKKIL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+PN IC A+L+ + PL+STSV+ E DP +I D +
Sbjct: 113 ------PRRKTIGLRVPNHQICHALLELVGEPLLSTSVRLPGHEEIFTDPSLIRDQLEHQ 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG+ PST++DMT P+++R+G G
Sbjct: 167 -VDLIIDGGILPEHPSTIIDMTSGEPELLREGAG 199
>gi|153807484|ref|ZP_01960152.1| hypothetical protein BACCAC_01764 [Bacteroides caccae ATCC 43185]
gi|149129846|gb|EDM21058.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides caccae ATCC 43185]
Length = 204
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+PN+ I + I + +DAP+++T++ + +D E++ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPNNNIIREIARLLDAPIMTTTLPYDEDEDLEYITDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T P+I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTEDEPEIVRQGKG----WLEE 203
>gi|375149702|ref|YP_005012143.1| Sua5/YciO/YrdC/YwlC family protein [Niastella koreensis GR20-10]
gi|361063748|gb|AEW02740.1| Sua5/YciO/YrdC/YwlC family protein [Niastella koreensis GR20-10]
Length = 206
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 19/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + +V++L EG + + PTDT+Y + CD+ H AI+R+ RIKN++P
Sbjct: 1 MLLHLHPENPQPRNISTIVKVLSEGGIIIYPTDTIYGLGCDIFQHKAIDRICRIKNIDPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L D+ YT I+R +KH LPGPYTFIL ASKEVPK
Sbjct: 61 KAQLSFVCYDLSDLSRYTKSI-------STPIYRLLKHYLPGPYTFILPASKEVPK---- 109
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
S + +G+RIPN+ I + I++++ P++ST++ E+ DP ++ D +
Sbjct: 110 -----ILQSKKNTIGLRIPNNLIARTIVKELGHPILSTTLPGTMVEEY-TDPDLMHDNF- 162
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V DGG+ PSTV+D TG P +IRQG G
Sbjct: 163 EKLVDVVADGGIGGMVPSTVIDCTGDEPVLIRQGAG 198
>gi|423301860|ref|ZP_17279883.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides finegoldii
CL09T03C10]
gi|408470951|gb|EKJ89483.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides finegoldii
CL09T03C10]
Length = 204
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNHIIREIARLLDAPIMTTTLPHEENEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T P+I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTENEPEIVRQGKG----WLEE 203
>gi|423216947|ref|ZP_17203443.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides caccae CL03T12C61]
gi|392629477|gb|EIY23484.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides caccae CL03T12C61]
Length = 204
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E++ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYDEDEDLEYITDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T P+I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTEDEPEIVRQGKG----WLEE 203
>gi|383114368|ref|ZP_09935132.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D2]
gi|313693926|gb|EFS30761.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D2]
Length = 204
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L +I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYEEHEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T +IIRQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTDDELEIIRQGKG----WLEE 203
>gi|160886924|ref|ZP_02067927.1| hypothetical protein BACOVA_04938 [Bacteroides ovatus ATCC 8483]
gi|237721208|ref|ZP_04551689.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293370410|ref|ZP_06616964.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus SD CMC 3f]
gi|299148444|ref|ZP_07041506.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_23]
gi|336415481|ref|ZP_08595820.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus 3_8_47FAA]
gi|423288969|ref|ZP_17267820.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus CL02T12C04]
gi|423294873|ref|ZP_17273000.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus CL03T12C18]
gi|156107335|gb|EDO09080.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus ATCC 8483]
gi|229449004|gb|EEO54795.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292634558|gb|EFF53093.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus SD CMC 3f]
gi|298513205|gb|EFI37092.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_23]
gi|335940360|gb|EGN02227.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus 3_8_47FAA]
gi|392668733|gb|EIY62227.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus CL02T12C04]
gi|392676064|gb|EIY69505.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus CL03T12C18]
Length = 204
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + NIF+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNIFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYEEHEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T +IIRQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTDDELEIIRQGKG----WLEE 203
>gi|255691112|ref|ZP_05414787.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides finegoldii DSM
17565]
gi|260623465|gb|EEX46336.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides finegoldii DSM
17565]
Length = 204
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E++ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNHIIREIARLLDAPIMTTTLPHEENEDLEYITDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T P+I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTENEPEIVRQGKG----WLEE 203
>gi|262408394|ref|ZP_06084941.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647539|ref|ZP_06725118.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus SD CC 2a]
gi|294808576|ref|ZP_06767320.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides xylanisolvens SD CC
1b]
gi|298482087|ref|ZP_07000275.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D22]
gi|336404038|ref|ZP_08584740.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_30]
gi|345508608|ref|ZP_08788234.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D1]
gi|423212236|ref|ZP_17198765.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides xylanisolvens
CL03T12C04]
gi|229445722|gb|EEO51513.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D1]
gi|262353946|gb|EEZ03039.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637107|gb|EFF55546.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides ovatus SD CC 2a]
gi|294444219|gb|EFG12942.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides xylanisolvens SD CC
1b]
gi|298271644|gb|EFI13217.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D22]
gi|335943874|gb|EGN05704.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_30]
gi|392695124|gb|EIY88349.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides xylanisolvens
CL03T12C04]
Length = 204
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNISREIARLLDAPIMTTTLPYEEHEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T +I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTDNELEIVRQGKG----WLEE 203
>gi|393781461|ref|ZP_10369656.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides salyersiae
CL02T12C01]
gi|392676524|gb|EIY69956.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides salyersiae
CL02T12C01]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 128/218 (58%), Gaps = 22/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ + L+ VV++L +G + + PTDT+YAI C AIER+ RIKN++P
Sbjct: 6 MLLKLYEKNNNPQDLQQVVDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKNIDPR 65
Query: 61 K-PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L I Y + N F+ +K LPGP+TFIL + ++PK
Sbjct: 66 KNNLSIICYDLSSISEY--------AKVDNNTFKLMKRNLPGPFTFILNGTNKLPK---- 113
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADT 177
+ RK VG+R+P++ I + I + +DAP+++T++ + +D E+M DP +I +
Sbjct: 114 ------IFRNRKEVGIRMPDNHIIREIARLLDAPIMTTTLPHEADEDLEYMTDPELIDEK 167
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+G E +D V+DGG+ EPST+V T P+I+RQGKG
Sbjct: 168 FG-ETVDLVIDGGIGGIEPSTIVSCTEDTPEIVRQGKG 204
>gi|295086691|emb|CBK68214.1| translation factor SUA5 [Bacteroides xylanisolvens XB1A]
Length = 204
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIIDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N+F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNVFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYEEHEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T +I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTDNELEIVRQGKG----WLEE 203
>gi|380693862|ref|ZP_09858721.1| hypothetical protein BfaeM_07748 [Bacteroides faecis MAJ27]
Length = 204
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V ++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRVTDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVGNNEFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYDENEDLEYMTDPELIDEKFG-DMVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
EPSTVV T P+I+RQGKG W+EE
Sbjct: 176 GGIEPSTVVKCTEDEPEIVRQGKG----WLEE 203
>gi|218778786|ref|YP_002430104.1| Sua5/YciO/YrdC/YwlC family protein [Desulfatibacillum alkenivorans
AK-01]
gi|218760170|gb|ACL02636.1| Sua5/YciO/YrdC/YwlC family protein [Desulfatibacillum alkenivorans
AK-01]
Length = 202
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 122/215 (56%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P + K+ VVE+LK G + PTDT+Y I CD+ + AI+++ R+K +E +
Sbjct: 1 MLLPINPVNPEFRKIAQVVEVLKRGGIIAYPTDTIYGIGCDIMNKKAIQKVYRLKQMEST 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS +C L++I Y + ++ +K LPGPYTFIL ASK VPK +
Sbjct: 61 QPLSFICSDLQNISDY--------AKVSNYAYKTMKRLLPGPYTFILEASKLVPKIMI-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK G+R+P AIC I++++ P+ISTS L NE+M DP ++ D Y
Sbjct: 111 -------TKRKTAGIRVPEHAICMEIIKELGNPIISTSAADLDGNEFM-DPSLLHDYYNN 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG S+VV + P+++R G G
Sbjct: 163 Q-IDLVIDGGPVSGRASSVVSLIDDEPEVLRVGAG 196
>gi|158521899|ref|YP_001529769.1| Sua5/YciO/YrdC/YwlC family protein [Desulfococcus oleovorans Hxd3]
gi|158510725|gb|ABW67692.1| Sua5/YciO/YrdC/YwlC family protein [Desulfococcus oleovorans Hxd3]
Length = 202
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 120/216 (55%), Gaps = 19/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ +P + VV+ L++G + PTDT YAI CD+ ++E++ +IK S
Sbjct: 1 MLLKINPQNPQERLIAKVVDSLRQGGIVAFPTDTFYAIGCDIMQKKSVEKIYQIKQRHKS 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L+DI Y + +R +K LPGPYTFIL S+ +PK V
Sbjct: 61 KPFSFICCDLKDISEY--------AKVTDYAYRTMKRLLPGPYTFILEGSRPLPKTMV-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S RK G+R+P++AIC AI++ + P+IST+ K L D DP +I D +G
Sbjct: 111 -------SKRKTAGIRVPDNAICMAIVRALGNPVISTTAK-LPDKGVFTDPELIHDHFG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+ LD VVDGG +PS+++ P+IIR+G GP
Sbjct: 162 KLLDIVVDGGPVPCQPSSILSFVDEEPEIIRRGLGP 197
>gi|29349536|ref|NP_813039.1| hypothetical protein BT_4128 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298385032|ref|ZP_06994591.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_14]
gi|383120474|ref|ZP_09941202.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_6]
gi|29341445|gb|AAO79233.1| putative Sua5/yciO/yrdC family protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|251840473|gb|EES68555.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_6]
gi|298262176|gb|EFI05041.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 1_1_14]
Length = 204
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 26/211 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V ++L +G + + PTDT+YAI C AIER+ RIK+++P K LSI+C L I
Sbjct: 15 LQRVTDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKDIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +KH LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVGNNEFKLMKHNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+M DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPYDEHEDLEYMTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
EPSTVV T P+I+RQGKG W+E
Sbjct: 176 GGIEPSTVVKCTEDEPEIVRQGKG----WLE 202
>gi|110637486|ref|YP_677693.1| translation factor SUA5 [Cytophaga hutchinsonii ATCC 33406]
gi|110280167|gb|ABG58353.1| translation factor SUA5 [Cytophaga hutchinsonii ATCC 33406]
Length = 208
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 125/217 (57%), Gaps = 19/217 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ ++ P K+ VE++++G + + PTDT+YAI CD+ + A+ER+ R+KN++P
Sbjct: 4 LLLKIHPDNPPLNKILTAVEIIRKGGIVIYPTDTVYAIGCDIHNQKAVERVCRLKNIQPG 63
Query: 61 K-PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C+ L I YT P +F+ +K LPGPYTFIL A+ VP
Sbjct: 64 KINLSFICQDLSHISEYTKALP-------TQVFKVMKQVLPGPYTFILNANNNVP----- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
+ +K +G+R+P++ I Q +L+++ P++STS+K + E+ DP I + Y
Sbjct: 112 ----NILNTKKKTIGIRVPDNRIVQLLLKELGNPILSTSIKNEDEILEYTTDPEEIYERY 167
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E ST++D TG ++IR+GKG
Sbjct: 168 -KNVVDVIIDGGFGGNEASTILDCTGNEIEVIREGKG 203
>gi|406942596|gb|EKD74792.1| hypothetical protein ACD_44C00330G0002 [uncultured bacterium]
Length = 210
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 19/199 (9%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYT 77
VV +LK G V V PTD+ YA+ C L +A+ER+RRI+N+ +++CR L ++ TY
Sbjct: 20 VVHVLKAGGVIVYPTDSGYALGCQLGDKAALERIRRIRNLGKEHYFTLVCRDLSELATY- 78
Query: 78 TGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRI 137
Q +IFR +K PGPYTFIL A++ VP++ + RK VG+RI
Sbjct: 79 -------AQVDNHIFRILKIFTPGPYTFILKAARSVPRRL--------QNPRRKTVGLRI 123
Query: 138 PNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDFVVDGGVRVAEP 196
P + I AIL+ +D PL+STS+ L D E M ++P + + G + +D +VDGG EP
Sbjct: 124 PRNNIALAILEALDEPLMSTSL-ILPDTEVMAIEPEAVKELLGSK-IDLIVDGGFCGLEP 181
Query: 197 STVVDMTGTYPKIIRQGKG 215
++V+D PK+IR+GKG
Sbjct: 182 TSVIDFVEGEPKVIRKGKG 200
>gi|167753477|ref|ZP_02425604.1| hypothetical protein ALIPUT_01751 [Alistipes putredinis DSM 17216]
gi|167658102|gb|EDS02232.1| Sua5/YciO/YrdC/YwlC family protein [Alistipes putredinis DSM 17216]
Length = 200
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 127/202 (62%), Gaps = 19/202 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
+++ VV LL+ V + PTD++YA C ++S A+ERLRRIK + + S++ SL I
Sbjct: 14 EIDRVVNLLERDGVVIYPTDSVYAFGCSIRSAKAVERLRRIKGKDLTT-FSVVFDSLGQI 72
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y R D FR +K LPGP+TF+L AS +P K + R+ +
Sbjct: 73 ADYC----RVDNAQ----FRLLKQNLPGPFTFLLDASSRMPHKALER---------RRTI 115
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRV 193
G+RIP+++I +AI++++ APL+++SV ++ E+M DP +I + YG + ++ V+DGGV
Sbjct: 116 GIRIPDNSIPRAIVERLGAPLLTSSVLDDEETEYMTDPELIHERYGRD-VELVIDGGVGD 174
Query: 194 AEPSTVVDMTGTYPKIIRQGKG 215
A P+TVVD+TG P+I+R+GKG
Sbjct: 175 AVPTTVVDLTGGEPEILREGKG 196
>gi|241662683|ref|YP_002981043.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia pickettii 12D]
gi|240864710|gb|ACS62371.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia pickettii 12D]
Length = 207
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 125/214 (58%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + VE+++ G + +PTD+ YA+ C L SA+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAVEIIRSGGLVALPTDSCYALACHLDDKSAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R +K PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVLKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A++ ++ PL+S +++ D+E + + I D +
Sbjct: 112 ----SHPSRKTIGLRVPEHAIPLALMAELGEPLLSATLQLPGDDEPLNEAETIRDRLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++RQG+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRQGRG 200
>gi|113474502|ref|YP_720563.1| translation factor SUA5 [Trichodesmium erythraeum IMS101]
gi|110165550|gb|ABG50090.1| translation factor SUA5 [Trichodesmium erythraeum IMS101]
Length = 218
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 26/223 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + ++E ++ LK+GAV + PTDT+YAI CDL SA+E++R+IK + K
Sbjct: 4 FYELHPDTPQNRRVEKIINDLKDGAVMLYPTDTVYAIGCDLYVKSAVEKVRQIKQLSNDK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL +I Y + + +R +K +PGPYTF+L A+K VP+ +
Sbjct: 64 PLTFLCSSLSNIANYAV--------VNDSAYRIIKRLIPGPYTFVLPATKLVPRLVMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK G+R+PN+ +C +L+ +D P+ISTS D E + P+ + G
Sbjct: 114 ------PKRKTTGIRVPNNQVCLTLLKALDNPIISTSANITSDAEGIA-PIKVEVVTGKA 166
Query: 182 GL--------DFVVDGGV-RVAEPSTVVDMTGTYPKIIRQGKG 215
L D +VD G + + ST++D+TG P +IRQG G
Sbjct: 167 ELFDCLENLVDIIVDDGSDSIYQVSTILDLTGHQPNLIRQGLG 209
>gi|428307183|ref|YP_007144008.1| translation factor SUA5 [Crinalium epipsammum PCC 9333]
gi|428248718|gb|AFZ14498.1| translation factor SUA5 [Crinalium epipsammum PCC 9333]
Length = 219
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 22/214 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++E +++ L+ GAV + PTDT+YAI CD+ S SA+ER+RRIK + KPL+ L
Sbjct: 9 PDTPQTRRIEQIIDALRNGAVMLYPTDTVYAIGCDINSKSAVERVRRIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y T D +R +KH +PGPYTF+L A+K VPK +
Sbjct: 69 CHSLSNIAQYAT---VSDAA-----YRLMKHLIPGPYTFLLPATKLVPK--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIADTYGPEG 182
RK G+R+P+ +C A+L ++ P+ISTS L D+ ++ V + D +
Sbjct: 113 NPKRKTTGIRVPDHPVCMALLNALENPIISTSAHLLDDDGNAPTLSMERVQLFDELD-KL 171
Query: 183 LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D G A E ST++D+T P ++R+G G
Sbjct: 172 VDVIIDNGTEPAMEVSTILDLTSEEPVMVRKGLG 205
>gi|428181402|gb|EKX50266.1| hypothetical protein GUITHDRAFT_104081 [Guillardia theta CCMP2712]
Length = 267
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 12/217 (5%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEP- 59
++VE + G +W+L+ + E L+EG +G++PTDT YA V ++S + RL +K +
Sbjct: 47 VFVEIEDIGHSAWRLDSIAETLREGGLGIIPTDTSYAFVTSIESRDGVSRLYELKQQDSI 106
Query: 60 -SKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCV 118
KP SILC S+ I YTT ++F+ +K LPGPYTFI ++ ++P+ +
Sbjct: 107 KKKPFSILCDSISQISKYTTAI------NFKSVFKMLKEVLPGPYTFICPSTNDLPRMII 160
Query: 119 RYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTY 178
+ AK RK +GVRIP D +C ++ K+ PL+ V + + + V +
Sbjct: 161 DH-KKHAKIWKRKEIGVRIPKDEVCLQLIGKVGTPLLCAGVHKTDEESYSIGHVFAENE- 218
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DF+V G R AE ST+VD+T I+R+G G
Sbjct: 219 --NLIDFMVAAGERNAESSTIVDLTKEPAVILREGAG 253
>gi|327405619|ref|YP_004346457.1| translation factor SUA5 [Fluviicola taffensis DSM 16823]
gi|327321127|gb|AEA45619.1| translation factor SUA5 [Fluviicola taffensis DSM 16823]
Length = 205
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 125/218 (57%), Gaps = 20/218 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M++E +P+ D+ ++ VV+ LK+G + ++PTD +YA+ CD+ + + L + K+V+ S
Sbjct: 1 MFIEINPTNIDNRLVQQVVDELKKGGIIIIPTDAVYAVACDVMNKKGLAELAKWKDVKLS 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K SI+C L ++ Y R N FR +KH LPGP+TFIL A+ EV K
Sbjct: 61 KANFSIICSDLSEVSEYVKQLDR-------NTFRLLKHYLPGPFTFILDATSEVSKLF-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
S +K +G+RIP++ I QAI++++ P+ TS+ +D E+ VDP I +
Sbjct: 112 -------DSSKKEIGIRIPDNKIVQAIVERLGNPMAVTSLHDSEDEIMEYFVDPASIYER 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y E + ++DGG + ST+VD T +IIRQG G
Sbjct: 165 YDDE-VAIIIDGGPGKLDASTIVDCTNGNAEIIRQGVG 201
>gi|309781239|ref|ZP_07675976.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia sp. 5_7_47FAA]
gi|404393848|ref|ZP_10985652.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia sp. 5_2_56FAA]
gi|308920060|gb|EFP65720.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia sp. 5_7_47FAA]
gi|348615658|gb|EGY65169.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia sp. 5_2_56FAA]
Length = 207
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 126/214 (58%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + VE+++ G + +PTD+ YA+ C L SA+ERLRR+++++
Sbjct: 4 FFQIHPTTPQGRLIRQAVEIIRGGGLVALPTDSCYALACHLDDKSAVERLRRVRSIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R +K PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVLKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A++ ++ PL+S +++ D+E + + I D +
Sbjct: 112 ----SHPSRKTIGLRVPEHAIPLALMAELGEPLLSATLQLPGDDEPLNEAETIRDRLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++RQG+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRQGRG 200
>gi|160900844|ref|YP_001566426.1| Sua5/YciO/YrdC/YwlC family protein [Delftia acidovorans SPH-1]
gi|333912853|ref|YP_004486585.1| Sua5/YciO/YrdC/YwlC family protein [Delftia sp. Cs1-4]
gi|160366428|gb|ABX38041.1| Sua5/YciO/YrdC/YwlC family protein [Delftia acidovorans SPH-1]
gi|333743053|gb|AEF88230.1| Sua5/YciO/YrdC/YwlC family protein [Delftia sp. Cs1-4]
Length = 214
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ EA P ++ ++L++GA+ +PTD+ YA+VC L A+ERLRRI+ +
Sbjct: 3 LRFEAHPDNPQPRLIKQAADMLRQGAILAIPTDSSYALVCHLDDRPAVERLRRIRQINDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ +Y R D + +R +K PGPYTFIL ASKEVPK+
Sbjct: 63 HHLTLLCRDLSELSSYA----RVDNRQ----YRLLKLATPGPYTFILEASKEVPKRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +L+++ PLI+T++ + E + D I + + P
Sbjct: 112 -----SHPSRKTIGLRVPDRKGTQLLLEQLGEPLIATTLIPPGETEALHDADAILERF-P 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
LD +VD G +EP+TV+D+ G P ++RQG+G
Sbjct: 166 HELDAIVDAGACPSEPTTVIDLVPMALGNPPTVVRQGRG 204
>gi|116749551|ref|YP_846238.1| Sua5/YciO/YrdC/YwlC family protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698615|gb|ABK17803.1| translation factor SUA5 [Syntrophobacter fumaroxidans MPOB]
Length = 204
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 18/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + K++ +VE+L G + PTDT Y I CDL + ++IER+ +K P
Sbjct: 1 MILEINPRHPEPRKIQKIVEVLANGGIIAYPTDTYYGIGCDLFNKASIERIYLMKRRSPQ 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+P S +C L++I Y Q ++ +K LPGPYTF+L S+ VPK +
Sbjct: 61 QPFSFICNDLKNISEY--------AQVTNYAYKTMKRLLPGPYTFVLEGSRLVPKIML-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R+ VG+R+P++ IC AI+Q++ P+ISTS + N+ + P I + G
Sbjct: 111 -------TKRQTVGIRVPDNPICLAIVQELGHPIISTSATNPETNQILASPQEIKEILG- 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD +VDGG +PS+V+ + P+++R G G
Sbjct: 163 HTLDLIVDGGNVSGKPSSVISLIDDSPEVLRVGNG 197
>gi|379730924|ref|YP_005323120.1| Sua5/YciO/YrdC/YwlC family protein [Saprospira grandis str. Lewin]
gi|378576535|gb|AFC25536.1| Sua5/YciO/YrdC/YwlC family protein [Saprospira grandis str. Lewin]
Length = 207
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E P + K+E V+++LK G V + PTDT+Y + CD+ AIER+ RIK ++P
Sbjct: 1 MLLEIHPDNPQARKIEQVLKVLKNGGVIIYPTDTVYGLGCDITQPRAIERICRIKGIQPK 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L DI Y + +I++ +K LPGP+TFIL + +PK
Sbjct: 61 KANLSFICADLSDISNYCRPY-------STSIYKLMKSALPGPFTFILEGNSSLPK---- 109
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIA 175
+ +K +GVR+PN I + ++ + PL+S+S+K L + E+ DP I
Sbjct: 110 -----LLKNRKKTLGVRVPNSPIVRDLVLGLGQPLLSSSIKNLDEEDEIREYPTDPYEIH 164
Query: 176 DTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ Y +D V+DGG+ +PSTVVD T P++IRQG G
Sbjct: 165 EQY-EHLVDLVIDGGIGGHQPSTVVDCTQNPPELIRQGLG 203
>gi|224026570|ref|ZP_03644936.1| hypothetical protein BACCOPRO_03327 [Bacteroides coprophilus DSM
18228]
gi|224019806|gb|EEF77804.1| hypothetical protein BACCOPRO_03327 [Bacteroides coprophilus DSM
18228]
Length = 203
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 122/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
++ VV++L +G + + PTDT+YAI C IER+ ++K ++P K LSI+C L +I
Sbjct: 15 IQRVVDILNDGGIIIYPTDTMYAIGCHALKERPIERICKLKKIDPRKHNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K CLPGP+TFIL A +PK + RK V
Sbjct: 75 SEY--------ARVNNATFKLMKRCLPGPFTFILNADSRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E++ DP +I + +G E +D V+DGG+
Sbjct: 117 GIRVPDNNIIREICRSLDAPILTTTLPREEHEDIEYVTDPELIDEKFGEE-VDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
E STV+D P+IIRQGKG
Sbjct: 176 GGIESSTVIDCCDDEPEIIRQGKG 199
>gi|194289302|ref|YP_002005209.1| hypothetical protein RALTA_A1178 [Cupriavidus taiwanensis LMG
19424]
gi|193223137|emb|CAQ69142.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 207
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P S L+ ++L++G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 YFEIHPLNPQSRLLKQAAQILQKGGLVALPTDSSYALACRLDDKAAVERLRRLRGIDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCRDLSELGN----FARVDNRQ----YRWLKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P AI A+L + PLIS +++ D + DP I +
Sbjct: 112 ----SHPARKTIGVRVPEHAIPLALLGETGEPLISATLQLPGDEAPLNDPAQIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VVDGG A+P+TV+D+TG P+++R G+G
Sbjct: 168 -LDLVVDGGPAPAQPTTVIDLTGGEPELVRAGRG 200
>gi|388456579|ref|ZP_10138874.1| translation factor [Fluoribacter dumoffii Tex-KL]
Length = 206
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 124/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + +A+ER+R+++ ++ +
Sbjct: 4 FFALHPDNPQARLLRKAVNIIEEGGLIVYPTDSGYALGCSLGNKAALERIRKLRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGTY--------ARVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L+ ++APL+ST++ + +P I D G +
Sbjct: 113 -----HPKRKTLGLRVPDNMITLALLECLEAPLMSTTLILPGAKAPLSEPEAIHDLLGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 168 -IDLVIDGGNCGQEPTTVVDLTGDYPVIIREGKG 200
>gi|430760718|ref|YP_007216575.1| Sua5/YciO/YrdC/YwlC [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010342|gb|AGA33094.1| Sua5/YciO/YrdC/YwlC [Thioalkalivibrio nitratireducens DSM 14787]
Length = 193
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 119/198 (60%), Gaps = 17/198 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L++G V +PTD YA+ C + S ER+RR++ V+ S L++LCR L ++ Y
Sbjct: 8 VERLEQGGVIALPTDACYALACMIGDKSGAERIRRLRQVDDSHHLTLLCRDLSELGLY-- 65
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ + FR +K PGPYTFIL A++EVP++ ++ R+ VG+R+P
Sbjct: 66 ------AKVDNSAFRLMKALTPGPYTFILPATREVPRRL--------QHPKRRTVGLRVP 111
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ + QA+L ++ APL+S +++ D + +P +A+ G + +D +VD G E +T
Sbjct: 112 DSQVVQALLAELGAPLMSATLRLPGDAHPLSEPWEMAERLGAQ-VDAIVDSGAGNLEATT 170
Query: 199 VVDMTGTYPKIIRQGKGP 216
V+D+TG+ P+++RQG GP
Sbjct: 171 VIDLTGSTPEVLRQGLGP 188
>gi|344339359|ref|ZP_08770288.1| Sua5/YciO/YrdC/YwlC family protein [Thiocapsa marina 5811]
gi|343800663|gb|EGV18608.1| Sua5/YciO/YrdC/YwlC family protein [Thiocapsa marina 5811]
Length = 207
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 127/221 (57%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + + VE+L +G V + PTD+ YA+ C + SA+ER+RRI+ ++
Sbjct: 4 FFQIHPANPQTRLIRRSVEILLDGGVILYPTDSSYALGCQIGEKSAMERIRRIRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + D Q FR +K PGPYTFI A+K+VP++ +
Sbjct: 64 NFTLVCRDLSEITTYA----KIDNQA----FRLLKTLTPGPYTFIHEATKQVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ IC+A+L ++D P++ST++ + + DP + + +
Sbjct: 113 -----HPKRKTIGIRVPDNEICRALLGELDQPILSTTLIMPGGDRPLTDPEEMRELLDKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D ++DGG EP+TVVDMT P ++R GKG + E
Sbjct: 168 -VDLIIDGGFCGLEPTTVVDMTTEPPSLMRLGKGEASLFEE 207
>gi|152981334|ref|YP_001352969.1| translation factor [Janthinobacterium sp. Marseille]
gi|151281411|gb|ABR89821.1| translation factor (SUA5) [Janthinobacterium sp. Marseille]
Length = 207
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + V+++++G + +PTD+ YA+VC L A+ RLRRI+NV+
Sbjct: 4 FFQIHPDNPQARLISQAVQIVRDGGIVALPTDSCYALVCHLDDKDAVARLRRIRNVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y + D Q +R +K PG YTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSEIALYA----KVDNQQ----YRMLKAATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + I A+L+++ PL+ T++ ++E + DP + D +
Sbjct: 112 ----SHPSRKTIGLRVPENRIVHALLEELAQPLLGTTLILPGEDEPLTDPEDVRDRLN-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TV+D+T P + RQG+G
Sbjct: 167 VVDLVIDGGACSFEPTTVIDLTSGEPVLQRQGRG 200
>gi|397667060|ref|YP_006508597.1| Translation factor [Legionella pneumophila subsp. pneumophila]
gi|395130471|emb|CCD08713.1| Translation factor [Legionella pneumophila subsp. pneumophila]
Length = 214
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 12 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 71
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 72 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 120
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 121 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAQAPLSEPEAIKDLLGNQ 175
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 176 -IDLIIDGGNCGHEPTTVVDLTGDYPIIIREGKG 208
>gi|378777308|ref|YP_005185745.1| translation factor [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|364508122|gb|AEW51646.1| translation factor [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 221
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 19 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 78
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 79 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 127
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 128 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAQAPLSEPEAIKDLLGNQ 182
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 183 -IDLIIDGGNCGHEPTTVVDLTGDYPIIIREGKG 215
>gi|340786864|ref|YP_004752329.1| hypothetical protein CFU_1674 [Collimonas fungivorans Ter331]
gi|340552131|gb|AEK61506.1| hypothetical protein CFU_1674 [Collimonas fungivorans Ter331]
Length = 207
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ V++++ G + +PTD YA+VC L + A+ER+RRI+ V+
Sbjct: 4 FFQIHPDNPQLRLIKQAVQIIQSGGIVALPTDCCYALVCQLDNKDAVERVRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y R FR +K PG YTFIL A+KEVP++
Sbjct: 64 HLTMLCRDLSEISLYAKVDNRQ--------FRLLKSATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P +I A+L+++ PLI T++ + + + DP + +
Sbjct: 112 ----SHPARKTIGLRVPQHSIVNAVLEELGQPLIGTTLILPGEEQALTDPDEVRSQLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+DGG EP+TV+D+T P++IRQG+G
Sbjct: 168 -IELVIDGGACSLEPTTVIDLTSDEPELIRQGRG 200
>gi|54297353|ref|YP_123722.1| hypothetical protein lpp1398 [Legionella pneumophila str. Paris]
gi|53751138|emb|CAH12549.1| hypothetical protein lpp1398 [Legionella pneumophila str. Paris]
Length = 206
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 4 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 113 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAQAPLSEPEAIKDLLGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 168 -IDLIIDGGNCGHEPTTVVDLTGDYPIIIREGKG 200
>gi|52841673|ref|YP_095472.1| translation factor [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52628784|gb|AAU27525.1| translation factor [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 221
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 19 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 78
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 79 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 127
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 128 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAEAPLSEPEAIKDLLGNQ 182
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 183 -IDLIIDGGNCGHEPTTVVDLTGDYPIIIREGKG 215
>gi|54294522|ref|YP_126937.1| hypothetical protein lpl1598 [Legionella pneumophila str. Lens]
gi|397663875|ref|YP_006505413.1| Translation factor [Legionella pneumophila subsp. pneumophila]
gi|53754354|emb|CAH15838.1| hypothetical protein lpl1598 [Legionella pneumophila str. Lens]
gi|307610146|emb|CBW99692.1| hypothetical protein LPW_14601 [Legionella pneumophila 130b]
gi|395127286|emb|CCD05476.1| Translation factor [Legionella pneumophila subsp. pneumophila]
Length = 206
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 4 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 113 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAEAPLSEPEAIKDLLGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 168 -IDLIIDGGNCGHEPTTVVDLTGDYPIIIREGKG 200
>gi|373110470|ref|ZP_09524739.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
10230]
gi|423130461|ref|ZP_17118136.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
12901]
gi|371643112|gb|EHO08670.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
10230]
gi|371645044|gb|EHO10572.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
12901]
Length = 206
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 129/218 (59%), Gaps = 22/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + +++ VV++L+EG + + PTDT+Y + CD+ + A+ER+ +IK ++
Sbjct: 3 QFIKIYPENPNEKEIDKVVKVLREGGLVIYPTDTVYGLGCDISNSKALERIAKIKGIKLD 62
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L +I Y Q +IF+ +K LPGPYTFIL + E+PK
Sbjct: 63 KANFSFVCYDLSNISNYVK-------QIDTSIFKILKKALPGPYTFILPGNNELPK---- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
++ +K VG+R+P++ I + I++K+ P++STS+ + +D E+ DP +I +
Sbjct: 112 ------EFKKKKTVGIRVPDNNIAREIVRKLGNPIVSTSI-YDEDEILEYTTDPELIFEK 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E STV+D++G P+IIR GKG
Sbjct: 165 W-QNIVDIVIDGGYGNNEASTVIDLSGEEPEIIRAGKG 201
>gi|148358974|ref|YP_001250181.1| translation factor [Legionella pneumophila str. Corby]
gi|296107023|ref|YP_003618723.1| putative translation factor [Legionella pneumophila 2300/99 Alcoy]
gi|148280747|gb|ABQ54835.1| translation factor [Legionella pneumophila str. Corby]
gi|295648924|gb|ADG24771.1| putative translation factor [Legionella pneumophila 2300/99 Alcoy]
Length = 206
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V +++EG + V PTD+ YA+ C L + SA+ER+RR++ ++
Sbjct: 4 FFALHPDNPQARLLRKAVSIIEEGGLIVYPTDSGYALGCSLGNKSALERIRRLRQLDKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGTY--------AKVSNPIFRLLKAFTPGSYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I ++L+ ++APL+ST++ + +P I D G +
Sbjct: 113 -----HPKRRTLGLRVPDNTITLSLLECLEAPLMSTTLILPGAEAPLSEPEAIKDLLGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 168 -IDLIIDGGNCGHEPTTVVDLTGDYPVIIREGKG 200
>gi|423281824|ref|ZP_17260709.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 615]
gi|404582865|gb|EKA87556.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 615]
Length = 204
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 122/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V+LL +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIVDLLNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + NIF+ +K LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNIFKLMKRNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I + I + +DAP+++T++ + +D E++ DP +I + G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIREIARLLDAPIMTTTLPYDEHEDIEYVTDPELIDEKLG-DVVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTVV+ T I+RQGKG
Sbjct: 176 GGIEPSTVVNCTEGEAAIVRQGKG 199
>gi|134095363|ref|YP_001100438.1| hypothetical protein HEAR2179 [Herminiimonas arsenicoxydans]
gi|133739266|emb|CAL62315.1| Conserved hypothetical protein, putative translation factor
[Herminiimonas arsenicoxydans]
Length = 207
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 121/215 (56%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ + P + + VE++K G + +PTD+ YA+VC L A+ RLRRI+NV+
Sbjct: 3 QFFQIHPENPQARLISQAVEVIKGGGIVALPTDSCYALVCQLDDKDAVARLRRIRNVDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I Y + D Q +R +K PG YTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSEIAQYA----KIDNQQ----YRLLKAATPGAYTFILEATKEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P + I A+L+++ PL+ T++ ++E + DP + D
Sbjct: 112 -----SHPSRKTIGLRVPENRIVHAVLEELAQPLLGTTLILPGEDEPLTDPDDVRDRLS- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG P+TV+D+TG P + RQG+G
Sbjct: 166 KVVDLVIDGGACSFIPTTVIDLTGPEPVLQRQGRG 200
>gi|406893379|gb|EKD38459.1| hypothetical protein ACD_75C00728G0003 [uncultured bacterium]
Length = 203
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 117/215 (54%), Gaps = 18/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + ++ VV+LLK GAV PTDT Y I CDL + AI+++ ++K
Sbjct: 1 MLLEINPINPQARLIDQVVKLLKSGAVICYPTDTGYGIGCDLFNQKAIKQVMQLKRRPHD 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L DI Y +R +K CLPGPYTF+L +K VP+
Sbjct: 61 KPFSFMCFDLTDISQY--------AHVSNTAYRLMKKCLPGPYTFVLPGTKLVPR----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P I + +++ + P+++TSV + + DP I D Y
Sbjct: 108 ----VMASKQKTVGIRVPGHPISRLLIETLGNPVVNTSVMLDDEQAALADPYYI-DQYIG 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +PSTV+D+T +P+++R GKG
Sbjct: 163 NRIDLIIDGGPIFPDPSTVIDLTSDFPEVLRVGKG 197
>gi|381159509|ref|ZP_09868741.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodovibrio sp. 970]
gi|380877573|gb|EIC19665.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodovibrio sp. 970]
Length = 207
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 125/215 (58%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P +E E+ + G V + PTDT YA+ C + +A+ER+RRI+ ++
Sbjct: 4 FFDLHPDNPQPRLVERAAEIFRTGGVVIYPTDTCYALGCHIGDKAAMERIRRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D Q +R +K PGPYTFI A+K+VP++ +
Sbjct: 64 NFTLVCRDLSEIATYA----RIDNQD----YRLLKSLTPGPYTFIYQATKQVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ IC+A+L +D P++ST++ +D++ + DP + + G
Sbjct: 113 -----HPKRKAIGIRVPDTPICRALLSALDEPILSTTLIMPEDSDPLTDPYEMREMLG-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D ++DGG EP+TVVDMTG P I+R GKGP
Sbjct: 167 CVDLIIDGGFCGTEPTTVVDMTGDTPAILRAGKGP 201
>gi|424842766|ref|ZP_18267391.1| Sua5/YciO/YrdC/YwlC family protein [Saprospira grandis DSM 2844]
gi|395320964|gb|EJF53885.1| Sua5/YciO/YrdC/YwlC family protein [Saprospira grandis DSM 2844]
Length = 207
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E P + K+E V+++LK G V + PTDT+Y + CD+ AIER+ RIK ++P
Sbjct: 1 MLLEIHPENPQARKIEQVLKVLKNGGVIIYPTDTVYGLGCDITQPRAIERICRIKGIQPK 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L +I Y + +I++ +K LPGP+TFIL + +PK
Sbjct: 61 KANLSFICADLSNISNYCRPY-------STSIYKLMKSALPGPFTFILEGNSSLPK---- 109
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIA 175
+ +K +GVR+PN I + ++ + PL+S+S+K L + E+ DP I
Sbjct: 110 -----LLKNRKKTLGVRVPNSPIVRDLVLGLGQPLLSSSIKNLDEEDEIREYPTDPYEIH 164
Query: 176 DTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ Y +D V+DGG+ +PSTVVD T P +IRQG G
Sbjct: 165 EQY-EHLVDLVIDGGIGGHQPSTVVDCTQNPPDLIRQGLG 203
>gi|408491950|ref|YP_006868319.1| tRNA t(6)A37 threonylcarbamoyladenosine modification protein,
SUA5_YciO_YrcD superfamily [Psychroflexus torquis ATCC
700755]
gi|408469225|gb|AFU69569.1| tRNA t(6)A37 threonylcarbamoyladenosine modification protein,
SUA5_YciO_YrcD superfamily [Psychroflexus torquis ATCC
700755]
Length = 205
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 127/214 (59%), Gaps = 23/214 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +PS + L+ +V++LK+G + + PTDT+Y + CD+ + A+E++ RIK ++ K
Sbjct: 9 EENPSEKE---LKRIVKILKKGGLVIYPTDTVYGLGCDINNTKALEKIARIKGIKLEKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C+ L ++ Y Q + F+ +K LPGPYTFIL + ++P
Sbjct: 66 FSFVCQDLSNLSEYV-------AQLDSTTFKILKRNLPGPYTFILPGNNKLP-------- 110
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPE 181
+ + +K VG+R+PN+ I Q ++Q + P+ISTS++ D E+ DP +IA+ +G +
Sbjct: 111 --SVFKKKKTVGIRVPNNKIVQLLVQHLGNPIISTSIRDEDDVIEYTTDPELIAEKWG-K 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STV D+T T PK+IRQGKG
Sbjct: 168 LVDVVIDGGFGDNVASTVFDLTETEPKLIRQGKG 201
>gi|296135809|ref|YP_003643051.1| Sua5/YciO/YrdC/YwlC family protein [Thiomonas intermedia K12]
gi|410693550|ref|YP_003624171.1| putative RNA-binding protein, yciO [Thiomonas sp. 3As]
gi|294339974|emb|CAZ88337.1| putative RNA-binding protein, yciO [Thiomonas sp. 3As]
gi|295795931|gb|ADG30721.1| Sua5/YciO/YrdC/YwlC family protein [Thiomonas intermedia K12]
Length = 211
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ +L G V +PTD+ YA+VC L +A++RLR+I+ V+
Sbjct: 4 YFNLHPDNPQLRLIKQAAAVLHSGGVAAIPTDSSYALVCHLDDKAAVQRLRQIRQVDERH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LC L ++ Y R D + +R ++ C PGPYTFIL A+KEVP++
Sbjct: 64 HLTLLCSDLSELGNYA----RVDNRQ----YRLIRACTPGPYTFILEATKEVPRR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P +A+ +L +M PL++T++ D + D I D +
Sbjct: 111 ---VSHPSRKTIGVRVPQNAVAHTLLVEMAQPLLATTLILPGDEHALNDAADIRDQLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+D G +EP+TVVD+ G P +IR G+GP
Sbjct: 168 -VDLVLDAGPCPSEPTTVVDLCGAEPVVIRIGRGP 201
>gi|451946149|ref|YP_007466744.1| translation factor SUA5 [Desulfocapsa sulfexigens DSM 10523]
gi|451905497|gb|AGF77091.1| translation factor SUA5 [Desulfocapsa sulfexigens DSM 10523]
Length = 203
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 22/217 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P ++ VV+ LK G + PTDT Y I CD A++R+ +IK
Sbjct: 1 MLLAINPHNPQQRLIQQVVDGLKRGDIICYPTDTGYGIGCDFSCQKAVKRIEQIKRRPKG 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGH-ANI-FRAVKHCLPGPYTFILTASKEVPKKCV 118
KP S +C L +I Y H +NI +R +K LPGPYTF+L +K VPK
Sbjct: 61 KPFSFMCSDLTNISNY----------AHVSNIAYRLLKRNLPGPYTFVLPGTKLVPK--- 107
Query: 119 RYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTY 178
A + +K VG+R+P + ICQ +L+ + P+I+TS+ +D+ DP I Y
Sbjct: 108 ------AMSTKQKTVGIRVPENPICQMLLETLGNPIINTSLPADEDDTVASDPYDIECLY 161
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
G + LD V+DGG ++PS+++D+TG P ++R+GKG
Sbjct: 162 G-KLLDLVIDGGEVFSDPSSLIDLTGDDPVVLREGKG 197
>gi|270160110|ref|ZP_06188766.1| Sua5/YciO/YrdC/YwlC family protein [Legionella longbeachae D-4968]
gi|289165112|ref|YP_003455250.1| translation factor [Legionella longbeachae NSW150]
gi|269988449|gb|EEZ94704.1| Sua5/YciO/YrdC/YwlC family protein [Legionella longbeachae D-4968]
gi|288858285|emb|CBJ12153.1| putative translation factor [Legionella longbeachae NSW150]
Length = 206
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L V ++++G + V PTD+ YA+ C L + SA+ER+RR++ ++ +
Sbjct: 4 FFALHPDNPQARLLRKAVNIIEDGGIIVYPTDSGYALGCGLGNKSALERIRRLRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + Y + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGLY--------ARVSNPIFRLLKAFTPGAYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L+ ++APL+ST++ + +P I D G +
Sbjct: 113 -----HPKRKTLGLRVPDNVITLALLECLEAPLMSTTLILPGAKAPLSEPEAIRDLLGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVD+TG YP IIR+GKG
Sbjct: 168 -IDLVIDGGHCGQEPTTVVDLTGDYPVIIREGKG 200
>gi|313145497|ref|ZP_07807690.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423279844|ref|ZP_17258757.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 610]
gi|424662090|ref|ZP_18099127.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 616]
gi|313134264|gb|EFR51624.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577879|gb|EKA82615.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 616]
gi|404584832|gb|EKA89476.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis HMW 610]
Length = 204
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V+LL +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIVDLLNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + NIF+ +K LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNIFKLMKRNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ +D E++ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNHIIREIARLLDAPIMTTTLPHDEHEDIEYITDPELIDEKFGDQ-VDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPST+V+ T I+RQGKG
Sbjct: 176 GGIEPSTIVNCTDGEVTIVRQGKG 199
>gi|375357309|ref|YP_005110081.1| putative Sua5/yciO/yrdC family protein [Bacteroides fragilis 638R]
gi|423248941|ref|ZP_17229957.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL03T00C08]
gi|423256747|ref|ZP_17237675.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL03T12C07]
gi|301161990|emb|CBW21534.1| putative Sua5/yciO/yrdC family protein [Bacteroides fragilis 638R]
gi|392647909|gb|EIY41600.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL03T12C07]
gi|392657461|gb|EIY51097.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL03T00C08]
Length = 204
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 122/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V+LL +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIVDLLNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + NIF+ +K LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNIFKLMKRNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I + I + +DAP+++T++ + +D E++ DP +I + G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIREIARLLDAPIMTTTLPYDEHEDIEYVTDPELIDEKLG-DVVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTVV+ T I+RQGKG
Sbjct: 176 GGIEPSTVVNCTEGEAVIVRQGKG 199
>gi|189461153|ref|ZP_03009938.1| hypothetical protein BACCOP_01800 [Bacteroides coprocola DSM 17136]
gi|189432132|gb|EDV01117.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides coprocola DSM
17136]
Length = 203
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 22/208 (10%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRS 69
DS L+ +V++L +G + + PTDT+YA+ C IER+ ++KN++P K LSI+C
Sbjct: 11 DSDVLQHIVDILNDGGIIIYPTDTMYAMGCHALKERPIERICKLKNIDPRKNNLSIICCD 70
Query: 70 LRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSL 129
L +I Y + F+ +K LPGP+TF+L A +PK +
Sbjct: 71 LSNISEY--------ARVSNATFKLMKRNLPGPFTFVLNADSRLPK----------IFRN 112
Query: 130 RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVV 187
RK VG+R+P++ I + I +DAP+++T++ D E++ DP +I + +G E +D V+
Sbjct: 113 RKEVGIRVPDNNIIREICHLLDAPILTTTLPLNPDEDVEYVTDPELIDEKFGSE-VDLVI 171
Query: 188 DGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
DGG+ EPSTV++ P+IIRQGKG
Sbjct: 172 DGGIGGVEPSTVINCCEDVPEIIRQGKG 199
>gi|393786792|ref|ZP_10374924.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides nordii CL02T12C05]
gi|392658027|gb|EIY51657.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides nordii CL02T12C05]
Length = 204
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 120/204 (58%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQQVVDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNTFKLMKRNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + +DAP+++T++ + +D E+ DP +I + +G E +D V+DGG+
Sbjct: 117 GIRMPDNNIIREIARLLDAPIMTTTLPHEAHEDLEYATDPELIDEKFG-EIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTVV T P+I+RQ KG
Sbjct: 176 GGIEPSTVVSCTEGSPEIVRQAKG 199
>gi|359688830|ref|ZP_09258831.1| Sua5 family translation factor [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748873|ref|ZP_13305165.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira licerasiae str.
MMD4847]
gi|418756530|ref|ZP_13312718.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384116201|gb|EIE02458.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404275942|gb|EJZ43256.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira licerasiae str.
MMD4847]
Length = 205
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E P + L + + L EG V V PTDT+Y +V D +SH+ +E+L ++KN+ +
Sbjct: 1 MIIELHPQNPEKRILGQISKKLSEGGVYVFPTDTVYGLVADSQSHAGVEKLYKLKNISKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS+LC + Y Q FR +K PGPYTFI+ A+K +P R
Sbjct: 61 QPLSLLCADISTASNYME-------QLSNEAFRLMKRITPGPYTFIVKANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K++G+RIP+ QA+L+ PL STSV + KD E++ D +I YG
Sbjct: 110 SFSNQK---DKNIGIRIPDSKYLQALLELHPNPLTSTSV-FFKD-EFVTDVDMIEKEYGN 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++DGG+ E ST++D TG I+R+GKG
Sbjct: 165 K-VDGIIDGGILELELSTILDCTGDGISILREGKG 198
>gi|423305370|ref|ZP_17283369.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides uniformis
CL03T00C23]
gi|423311189|ref|ZP_17289158.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides uniformis
CL03T12C37]
gi|392679721|gb|EIY73100.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides uniformis
CL03T12C37]
gi|392681360|gb|EIY74719.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides uniformis
CL03T00C23]
Length = 204
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV+LL +G + + PTDT+YAI C AIER+ R+KN++P K LSI+C L +
Sbjct: 15 LQQVVDLLNDGGILIYPTDTMYAIGCHGLKERAIERICRLKNIDPKKNNLSIICYDLSKV 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I Q I + +DAP+++T++ + +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIQEIARLLDAPIMTTTLPHEDNEDIEYCTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD T P+IIRQG G W++E
Sbjct: 176 GGTEGSTVVDCTNGEPEIIRQGLG----WLDE 203
>gi|189468028|ref|ZP_03016813.1| hypothetical protein BACINT_04422 [Bacteroides intestinalis DSM
17393]
gi|189436292|gb|EDV05277.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides intestinalis DSM
17393]
Length = 204
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQQIVDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++AI Q I + +DAP+++T++ + +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNAIIQEIARVLDAPIMTTTLPHEEHEDMEYCTDPELIDEKFG-DLVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E ST+VD T +I+RQGKG W+ E
Sbjct: 176 GGTESSTIVDCTNGETEIVRQGKG----WLNE 203
>gi|149278400|ref|ZP_01884537.1| translation factor [Pedobacter sp. BAL39]
gi|149230770|gb|EDM36152.1| translation factor [Pedobacter sp. BAL39]
Length = 250
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 23/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + +E VE+LK+G + + PTDT+Y + CD+ + AIER+ RI+ ++P
Sbjct: 45 MLIKIYPENPNPKAIEQAVEVLKKGGIIIYPTDTVYGLGCDITNQKAIERICRIRGIKPE 104
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C LR I Y FR +K LPGP+TFIL A+ VPK
Sbjct: 105 KANFSFVCSDLRHISDYIKPI-------DTTTFRVLKKALPGPFTFILNANNNVPKLL-- 155
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
S +K VG+R+P++ I + I++ + P++STS+K D+ E+ DP +I +
Sbjct: 156 -------SSNKKTVGIRVPDNDIAREIVRLLGNPILSTSIK--DDDEVIEYSTDPELIHE 206
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y + +D V+DGG EPSTVVD T ++IR+GKG
Sbjct: 207 KY-EDRVDLVIDGGYGDNEPSTVVDCTSGEFEVIREGKG 244
>gi|328951772|ref|YP_004369106.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacca acetoxidans DSM
11109]
gi|328452096|gb|AEB07925.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacca acetoxidans DSM
11109]
Length = 202
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P L VV++L G + PTDT Y I CDL + AIE++ + K +
Sbjct: 1 MLIRINPENPPERLLRRVVQVLTAGGIIAYPTDTCYGIGCDLFNKKAIEKIYQFKKRPLT 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L+ I Y + ++ ++ LPGPYTFIL S+ VPK +
Sbjct: 61 KPFSFICADLKHISEY--------AKVSNFAYKTMRRLLPGPYTFILEGSRLVPKIML-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK G+R+P++AIC +++ + P+ISTS +D M DP IA+ Y P
Sbjct: 111 -------TRRKTAGLRVPDNAICLGLVKLLGHPIISTSASR-EDGSVMSDPYDIAEYYKP 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGGV PS+V+ + G P++IR+GKG
Sbjct: 163 P-LDLVIDGGVIAPAPSSVISLIGDVPEVIREGKG 196
>gi|325280506|ref|YP_004253048.1| Sua5/YciO/YrdC/YwlC family protein [Odoribacter splanchnicus DSM
20712]
gi|324312315|gb|ADY32868.1| Sua5/YciO/YrdC/YwlC family protein [Odoribacter splanchnicus DSM
20712]
Length = 202
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 129/217 (59%), Gaps = 20/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
MY++ ++ + VVE+LK G + + PTDT+YAI CD+ + A++R+ ++KN++P
Sbjct: 1 MYIKLFEDNPNTRDILKVVEVLKAGGIIIYPTDTIYAIGCDINNVKAVQRVCQLKNIKPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S++CR L +I Y + + +F+ +K LPGP+TF+L A+ ++P +
Sbjct: 61 KANFSMICRDLSNIAAY--------AKVNNEVFKVMKRNLPGPFTFVLPATNKLPNVMI- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
+ RK +G+RIP++ I +I++++ PL++TSVK + E+M DP +I + Y
Sbjct: 112 --------NRRKTIGIRIPDNYIVMSIVEELGNPLLTTSVKAEDEVVEYMTDPELIHEKY 163
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STVVD T ++IRQG G
Sbjct: 164 -EKLVDLVIDGGFGQNVASTVVDCTDDRIEVIRQGIG 199
>gi|187928076|ref|YP_001898563.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia pickettii 12J]
gi|187724966|gb|ACD26131.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia pickettii 12J]
Length = 207
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L SA+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKSAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R +K PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVLKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A++ ++ PL+S +++ D+E + + I D +
Sbjct: 112 ----SHPSRKTIGLRVPEHAIPLALMAELGEPLLSATLQLPGDDEPLNEAETIRDRLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+T P+++RQG+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTSGEPELVRQGRG 200
>gi|113867221|ref|YP_725710.1| translation factor (SUA5) [Ralstonia eutropha H16]
gi|113525997|emb|CAJ92342.1| putative translation factor (SUA5) [Ralstonia eutropha H16]
Length = 207
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P S ++ ++L++G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 YFEIHPLNPQSRLVKQAAQILQKGGLIALPTDSSYALACRLDDKAAVERLRRLRGIDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCRDLSELGN----FARVDNRQ----YRWLKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P AI A+L + PLIS +++ D E + DP I +
Sbjct: 112 ----SHPARKTIGVRVPEHAIPLALLGETGEPLISATLQMPGDEEPLNDPAEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VV GG A+P+TV+D+TG P++IR G+G
Sbjct: 168 -LDLVVCGGPAPAQPTTVIDLTGGEPELIRAGRG 200
>gi|160891097|ref|ZP_02072100.1| hypothetical protein BACUNI_03544 [Bacteroides uniformis ATCC 8492]
gi|156859318|gb|EDO52749.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides uniformis ATCC
8492]
Length = 204
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV+LL +G + + PTDT+YAI C AIER+ R+KN++P K LSI+C L +
Sbjct: 15 LQQVVDLLNDGGILIYPTDTMYAIGCHGLKERAIERICRLKNIDPKKNNLSIICYDLSKV 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I Q I + +DAP+++T++ +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIQEIARLLDAPIMTTTLPHDDNEDIEYCTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD T P+IIRQG G W++E
Sbjct: 176 GGTEGSTVVDCTNGEPEIIRQGLG----WLDE 203
>gi|167837135|ref|ZP_02464018.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
MSMB43]
gi|424903616|ref|ZP_18327129.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
MSMB43]
gi|390931489|gb|EIP88890.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
MSMB43]
Length = 209
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + ++ E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQTRLVKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ T+ R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELATFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPAHAITLALLEALGQPLLGTTLILSPDDEPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG EPSTV+D+TG P+++R G+GP
Sbjct: 168 -IDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGP 201
>gi|53712278|ref|YP_098270.1| hypothetical protein BF0986 [Bacteroides fragilis YCH46]
gi|60680456|ref|YP_210600.1| Sua5/yciO/yrdC family protein [Bacteroides fragilis NCTC 9343]
gi|265762469|ref|ZP_06091037.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336408500|ref|ZP_08588991.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 2_1_56FAA]
gi|383117224|ref|ZP_09937970.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_2_5]
gi|423258726|ref|ZP_17239649.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL07T00C01]
gi|423264302|ref|ZP_17243305.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL07T12C05]
gi|423269128|ref|ZP_17248100.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL05T00C42]
gi|423273311|ref|ZP_17252258.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL05T12C13]
gi|52215143|dbj|BAD47736.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491890|emb|CAH06649.1| putative Sua5/yciO/yrdC family protein [Bacteroides fragilis NCTC
9343]
gi|251947459|gb|EES87741.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_2_5]
gi|263255077|gb|EEZ26423.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|335935721|gb|EGM97669.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 2_1_56FAA]
gi|387776306|gb|EIK38406.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL07T00C01]
gi|392702437|gb|EIY95583.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL05T00C42]
gi|392706568|gb|EIY99691.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL07T12C05]
gi|392707912|gb|EIZ01025.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides fragilis
CL05T12C13]
Length = 204
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V+LL +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQRIVDLLNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + NIF+ +K LPGP+TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNIFKLMKRNLPGPFTFILNGTNRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I + I + +DAP+++T++ +D E++ DP +I + G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIREIARLLDAPIMTTTLPHDEHEDIEYVTDPELIDEKLG-DVVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTVV+ T I+RQGKG
Sbjct: 176 GGIEPSTVVNCTEGEAAIVRQGKG 199
>gi|209522310|ref|ZP_03270935.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. H160]
gi|209497255|gb|EDZ97485.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. H160]
Length = 211
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ +++ +G V +PTD+ YA+ C L A+ERLRR++ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAAQIINDGGVVALPTDSTYALACRLDDKDAVERLRRVRGLDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ F D +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSEL----ANFAMVDNWQ----YRLLKSVTPGPYVFVLQATKEVPRR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ST++ + E + DP I +
Sbjct: 111 ---VSHPSRKTIGLRVPDHAITLAILEELGQPLLSTTLIMPGETEPLNDPEEIRALLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
LD V+DGG V EPSTV+D+TG+ P ++R G+GP
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGSEPVLVRAGRGP 201
>gi|192361717|ref|YP_001982272.1| Sua5/YciO/YrdC/YwlC family protein [Cellvibrio japonicus Ueda107]
gi|190687882|gb|ACE85560.1| Sua5/YciO/YrdC/YwlC family protein [Cellvibrio japonicus Ueda107]
Length = 205
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 126/214 (58%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ V+++++G + V PTD+ YA+ C + A+ER+R ++ ++
Sbjct: 4 FFQIHPDNPQQRLIQQAVDIIRKGGLVVYPTDSAYALGCHIGDKDALERIRTLRQLDKYH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R + Q FR +K+ PG YTFIL A+ +VP++ +
Sbjct: 64 NFTLMCRDLSELATYA----RVNNQA----FRLLKNHTPGAYTFILEATADVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ PL+++S+ + M DP I +T +
Sbjct: 113 -----HPKRKTIGLRVPDNAIALALLEELGEPLMTSSLLLPGEEYPMTDPYDIRETLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVD+TG P++IRQGKG
Sbjct: 168 -VDLVIDGGYCGLEPTTVVDLTGDAPELIRQGKG 200
>gi|406886793|gb|EKD33751.1| hypothetical protein ACD_75C02606G0002 [uncultured bacterium]
Length = 229
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 18/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + ++ VV+LLK GAV PTDT Y I CDL + AI+++ ++K
Sbjct: 27 MLLEINPKNPQARLIDQVVKLLKGGAVICYPTDTGYGIGCDLFNQKAIKQIMQLKRRPHD 86
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S LC L DI Y +R +K LPGPYT +L +K VPK
Sbjct: 87 KPFSFLCCDLTDISQY--------AHVSNTAYRLMKKTLPGPYTLVLPGTKLVPK----- 133
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+R+P+ I + +++ + P+++TSV + + +P +I D Y
Sbjct: 134 ----VMATKQKTVGIRVPSHPISRMLIETLGNPIVNTSVMLADEETALAEPYLI-DEYIG 188
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG +PSTVVD+T YP+++R GKG
Sbjct: 189 NRIDLVIDGGTIFPDPSTVVDLTSDYPEVLRVGKG 223
>gi|423134162|ref|ZP_17121809.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CIP
101113]
gi|423326880|ref|ZP_17304688.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
3837]
gi|371646919|gb|EHO12429.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CIP
101113]
gi|404607450|gb|EKB06952.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CCUG
3837]
Length = 206
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 128/218 (58%), Gaps = 22/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + +++ VV++L+EG + + PTDT+Y + CD+ + A+ER+ +IK ++
Sbjct: 3 QFIKIYPENPNEKEIDKVVKVLREGGLVIYPTDTVYGLGCDISNSKALERIAKIKGIKLD 62
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L +I Y Q + F+ +K LPGPYTFIL + E+PK
Sbjct: 63 KANFSFVCYDLSNISNYVK-------QIDTSTFKILKKALPGPYTFILPGNNELPK---- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
++ +K VG+R+P++ I + I++K+ P++STS+ + +D E+ DP +I +
Sbjct: 112 ------EFKKKKTVGIRVPDNNIAREIVRKLGNPIVSTSI-YDEDEILEYTTDPELIFEK 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E STV+D++G P+IIR GKG
Sbjct: 165 W-QNIVDIVIDGGYGNNEASTVIDLSGEEPEIIRAGKG 201
>gi|198276288|ref|ZP_03208819.1| hypothetical protein BACPLE_02480 [Bacteroides plebeius DSM 17135]
gi|198270730|gb|EDY95000.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides plebeius DSM 17135]
Length = 230
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 122/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V++L +G + + PTDT+YA+ C IER+ ++KN++P K LSI+C L +I
Sbjct: 42 LQRIVDILNDGGIIIYPTDTVYALGCHALKERPIERICKLKNIDPRKNNLSIICYDLSNI 101
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + F+ +K LPGP+TFIL A +PK + RK V
Sbjct: 102 SEY--------ARVSNATFKLMKRNLPGPFTFILNADSRLPK----------IFRNRKEV 143
Query: 134 GVRIPNDAICQAILQKMDAPLISTS--VKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++AI + I Q +DAP+++T+ ++ +D E++ +P +I + +G E +D ++DGG
Sbjct: 144 GIRVPDNAIIREICQLLDAPILTTTLPLEEGEDIEYITEPELIDEKFG-EKVDLIIDGGT 202
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTV++ P+I+RQGKG
Sbjct: 203 GGIEPSTVINCCDDVPEIVRQGKG 226
>gi|88810631|ref|ZP_01125888.1| putative translation factor SUA5 [Nitrococcus mobilis Nb-231]
gi|88792261|gb|EAR23371.1| putative translation factor SUA5 [Nitrococcus mobilis Nb-231]
Length = 207
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 17/196 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E+L+ G V PTDT YA+ C + A+ER+RR++ + ++ CR L DI TY
Sbjct: 22 EILQRGGVIAYPTDTAYALGCCMGEREAVERIRRLRKLHERHNFTLACRDLSDIGTY--- 78
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
+ N FR +K PGPYTF+L A+ EVP++ ++ RK +G+R+P+
Sbjct: 79 -----AKVGNNAFRLLKAHTPGPYTFVLPATGEVPRRL--------QHPKRKTIGIRVPD 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
A+ AI ++ APL++T++ ++ + DP +I + G + LD ++DGG E STV
Sbjct: 126 SAVANAICAELGAPLMTTTLLLPHEDLPLTDPELIRERIGAQ-LDLIIDGGAGGLELSTV 184
Query: 200 VDMTGTYPKIIRQGKG 215
+D+TG P +IR+G G
Sbjct: 185 IDLTGETPAVIRRGVG 200
>gi|317481004|ref|ZP_07940084.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 4_1_36]
gi|316902897|gb|EFV24771.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 4_1_36]
Length = 204
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV+LL +G + + PTDT+YAI C AIER+ R+KN++P K LSI+C L +
Sbjct: 15 LQQVVDLLNDGGILIYPTDTMYAIGCHGLKERAIERICRLKNIDPKKNNLSIICYDLSKV 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNATFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I Q I + +DAP+++T++ + +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIQEIARLLDAPIMTTTLPHEDNEDIEYCTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD T P+IIRQG G W++E
Sbjct: 176 GGTEGSTVVDCTNGEPEIIRQGLG----WLDE 203
>gi|385209007|ref|ZP_10035875.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. Ch1-1]
gi|385181345|gb|EIF30621.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. Ch1-1]
Length = 211
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++K+G V +PTD+ YA+ C L A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIIKDGGVVALPTDSSYALACHLDDKEAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELSNFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ +++ + + + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILEELGQPLLGSTLIMPGETQPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG V EPSTV+D+TG P ++R G+G
Sbjct: 168 -LDLVIDGGPCVCEPSTVIDLTGAEPVLVRAGRG 200
>gi|91784220|ref|YP_559426.1| Sua5/YciO/YrdC/YwlC family translation factor [Burkholderia
xenovorans LB400]
gi|91688174|gb|ABE31374.1| Sua5/YciO/YrdC/YwlC family translation factor [Burkholderia
xenovorans LB400]
Length = 211
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++K+G V +PTD+ YA+ C L A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIIKDGGVVALPTDSSYALACHLDDKDAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELSNFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ +++ + + + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILEELGQPLLGSTLIMPGETQPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG V EPSTV+D+TG P ++R G+G
Sbjct: 168 -LDLVIDGGPCVCEPSTVIDLTGAEPVLVRAGRG 200
>gi|395763455|ref|ZP_10444124.1| hypothetical protein JPAM2_17112 [Janthinobacterium lividum PAMC
25724]
Length = 207
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ V++++ G V +PTD+ YA+VC L A+ERLRRI+ V+
Sbjct: 4 FFHIHPENPQLRLIKQAVQIIQSGGVVALPTDSCYALVCQLDDKGAVERLRRIRGVDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + FR +K PG YTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSELGVYA----RVDNRQ----FRLLKAATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I Q +L+++ PL+ ++ D + + D I + +
Sbjct: 112 ----SHPSRKTIGLRVPQHRIVQCLLEELGQPLLGATLTLPGDEDSLTDADTIRERL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGGV PSTV+D+TG P+++R G+G
Sbjct: 167 LVDLIIDGGVCAHGPSTVIDLTGAEPEVVRVGRG 200
>gi|238027994|ref|YP_002912225.1| Sua5/YciO/YrdC/YwlC [Burkholderia glumae BGR1]
gi|237877188|gb|ACR29521.1| Sua5/YciO/YrdC/YwlC [Burkholderia glumae BGR1]
Length = 211
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE++K+G V +PTD+ YA+ C L +A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPENPQPRLVRQAVEIVKQGGVIAMPTDSSYALACQLDDRAAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + + +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANF--------AMVDNHQYRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D + + DP I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAVLEALGEPLLGTTLILPPDTDPLNDPEEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG EPST+VD+TG P ++R G+GP
Sbjct: 168 -VDLVIDGGACPREPSTIVDLTGAEPVLVRAGRGP 201
>gi|410662737|ref|YP_006915108.1| Sua5/YciO/YrdC/YwlC family protein [Simiduia agarivorans SA1 = DSM
21679]
gi|409025094|gb|AFU97378.1| Sua5/YciO/YrdC/YwlC family protein [Simiduia agarivorans SA1 = DSM
21679]
Length = 208
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + E++ +G + PTD+ YA+ C + +A+ER+R ++ ++ +
Sbjct: 4 FFQIHPENPQHRLVVQAAEIISKGGLVAFPTDSAYALGCHIGDKNAVERIRVLRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + D Q ++R +KH PGPYTFIL A+ EVP++
Sbjct: 64 NFTLVCRDLSELATYA----KVDNQ----VYRMLKHQTPGPYTFILEATSEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++ I + IL ++ PL+S +++ + M DP I DT +
Sbjct: 112 ----QHPKRKTIGIRVPDNNIVREILSQLGEPLMSVTLQMPGEEYPMTDPYDIRDTLQHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG E +TVVD+TG P ++RQG G
Sbjct: 168 -LDLVIDGGYCGMEATTVVDLTGDLPTLVRQGLG 200
>gi|107028721|ref|YP_625816.1| Sua5/YciO/YrdC/YwlC [Burkholderia cenocepacia AU 1054]
gi|116690120|ref|YP_835743.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
HI2424]
gi|170733453|ref|YP_001765400.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia MC0-3]
gi|206560533|ref|YP_002231298.1| hypothetical protein BCAL2171 [Burkholderia cenocepacia J2315]
gi|444362140|ref|ZP_21162702.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia BC7]
gi|444372110|ref|ZP_21171607.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
K56-2Valvano]
gi|105897885|gb|ABF80843.1| Sua5/YciO/YrdC/YwlC [Burkholderia cenocepacia AU 1054]
gi|116648209|gb|ABK08850.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
HI2424]
gi|169816695|gb|ACA91278.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia MC0-3]
gi|198036575|emb|CAR52472.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|443594123|gb|ELT62797.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443597360|gb|ELT65791.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia BC7]
Length = 210
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVEIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I T +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIR-TRLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P++IR G+G
Sbjct: 167 QVDLVIDGGACPREPSTVIDLTGDAPELIRAGRG 200
>gi|189424902|ref|YP_001952079.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter lovleyi SZ]
gi|189421161|gb|ACD95559.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter lovleyi SZ]
Length = 203
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 122/221 (55%), Gaps = 20/221 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E DP ++ VV+ LK G + PTDT Y + C + + +ER+ ++K +
Sbjct: 1 MLLEIDPERPQPRQIAQVVDCLKNGGIVAYPTDTTYGLGCSIFNKKGLERIYQVKQRDKR 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L ++ Y HA F+ +K LPGPYTF+L AS+EVP +
Sbjct: 61 KPFSFICSDLSEVSRYAR------LTNHA--FKIMKRYLPGPYTFVLEASREVPDLLI-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+R+P++AIC +I+Q + P+++TS L + + DP+ I +G
Sbjct: 111 -------TKQKTVGIRMPDNAICLSIVQGLGVPIVTTSAN-LSGEDPVGDPLEINRLFG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
LD VVDGG+ + S+VV + G P+++R+G G L W+
Sbjct: 162 HALDLVVDGGLLTTDVSSVVSLVGKEPELLREGAG-DLSWL 201
>gi|218129310|ref|ZP_03458114.1| hypothetical protein BACEGG_00887 [Bacteroides eggerthii DSM 20697]
gi|317475279|ref|ZP_07934545.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217988487|gb|EEC54808.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides eggerthii DSM
20697]
gi|316908533|gb|EFV30221.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 204
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 29/223 (13%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-P 62
E + S AD L+ V+++L G + + PTDT+YAI C AIER+ ++K ++P K
Sbjct: 7 EKNNSAAD---LQQVIDILNNGGIIIYPTDTMYAIGCHGLKERAIERICQLKAIDPKKNN 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
LSI+C L I Y + N F+ +K LPGP+TFIL + +PK
Sbjct: 64 LSIICYDLSSISEY--------AKFDNNTFKLMKRNLPGPFTFILNGTVRLPK------- 108
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL--KDNEWMVDPVVIADTYGP 180
+ RK VG+R+P++ I Q + + +DAP+++T++ + +D E+ DP +I + +G
Sbjct: 109 ---IFRNRKEVGIRMPDNPIIQELARFLDAPIMTTTLPYEENEDIEYCTDPELIDEKFG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D V+DGG+ E ST+VD T +I+RQGKG W++E
Sbjct: 165 NIVDLVIDGGIGGIESSTIVDCTNGEAEIVRQGKG----WLDE 203
>gi|167570496|ref|ZP_02363370.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia oklahomensis
C6786]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLVKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ T+ R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELATFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPAHAITLALLEALGQPLLGTTLILSPDDEPLNDPEEIRTRLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
D V+DGG EPSTV+D+TG P+++R G+GP
Sbjct: 168 A-DLVIDGGACPREPSTVIDLTGDEPQLVRAGRGP 201
>gi|121606166|ref|YP_983495.1| Sua5/YciO/YrdC/YwlC family protein [Polaromonas naphthalenivorans
CJ2]
gi|120595135|gb|ABM38574.1| Sua5/YciO/YrdC/YwlC family protein [Polaromonas naphthalenivorans
CJ2]
Length = 211
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 25/218 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P + L VEL++ G + VPTD+ YA+VC L +A + LRRI+ V+ L
Sbjct: 6 EVHPLNPHARLLAQAVELIQRGGIAAVPTDSSYALVCQLDDKAASDNLRRIRGVDGKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y R D + FR +K PGPYTFIL ASKEVP++
Sbjct: 66 TLLCRDLSELANYA----RVDNKQ----FRLIKAATPGPYTFILEASKEVPRRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP--E 181
+ RK +G+R+P+ QA+L+ PL++T++ + E + DP D GP
Sbjct: 112 --SHPSRKTIGLRVPDHKTLQALLELHGGPLLATTLIPRGETESISDP---QDITGPLEH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
L ++D G EP+TVVD+T G P IIRQG+G
Sbjct: 167 ELAAIIDAGACHKEPTTVVDLTTMADGGDPVIIRQGRG 204
>gi|220935185|ref|YP_002514084.1| SUA5/YciO/YrdC/YwlC family protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996495|gb|ACL73097.1| SUA5/YciO/YrdC/YwlC family protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 205
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 125/213 (58%), Gaps = 17/213 (7%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + + V+++++G V V PTD+ YA+ C + + + +ER+RRI+ ++ +
Sbjct: 5 IEIHPDNPQARLIRQAVDVIRDGGVIVYPTDSCYALGCGIGNKTGMERIRRIRQLDDNHH 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
+++CR L +I TY + +R +K+ PGPYTF+L A+ EVP++
Sbjct: 65 FTLVCRDLSEIATY--------AKVDNTAYRLLKNLTPGPYTFLLKATHEVPRRL----- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+++ RK +G+R+P+ AI QA+L ++ PL+ST+++ D+ + DP I +
Sbjct: 112 ---QHAKRKTIGLRVPDHAITQALLAELGEPLMSTTLQLPGDHLPLSDPYDIEERLSAH- 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ G EP+TVVD+ G P+++RQG+G
Sbjct: 168 VDLILLAGSCGVEPTTVVDLVGEVPEVVRQGRG 200
>gi|224538268|ref|ZP_03678807.1| hypothetical protein BACCELL_03159 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221617|ref|ZP_17208087.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520128|gb|EEF89233.1| hypothetical protein BACCELL_03159 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645856|gb|EIY39578.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides cellulosilyticus
CL02T12C19]
Length = 204
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV++L +G + + PTDT+YAI C AIER+ RIK ++P K LSI+C L I
Sbjct: 15 LQQVVDILNDGGLIIYPTDTMYAIGCHGLKERAIERICRIKEIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++AI Q I + +DAP+++T++ + +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNAIIQEIARILDAPIMTTTLPHEAHEDIEYCTDPELIDEKFG-DLVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E ST+VD T ++IRQGKG W+ E
Sbjct: 176 GGTEFSTIVDCTSGEIEVIRQGKG----WLNE 203
>gi|254247809|ref|ZP_04941130.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|124872585|gb|EAY64301.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length = 210
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVEIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I T +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIR-TRLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 167 QVDLVIDGGACPREPSTVIDLTGDAPELVRAGRG 200
>gi|350560856|ref|ZP_08929695.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780963|gb|EGZ35271.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 205
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
+E L++G V +PTD YA+ C + S ER+RR++ V+ S L++LCR L ++ Y
Sbjct: 20 IERLEQGGVIALPTDACYALACMIGDKSGAERIRRLRQVDESHHLTLLCRDLSELGLY-- 77
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ + FR +K PGPYTFIL A++EVP++ ++ R+ VG+R+P
Sbjct: 78 ------AKVDNSAFRLMKTLTPGPYTFILPATREVPRRL--------QHPKRRTVGLRVP 123
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ + QA+L ++ APL+S +++ D + +P +A+ G + +D +VD G E +T
Sbjct: 124 DSRVAQALLAELGAPLMSATLQLPGDEHPLSEPWEMAERLGGQ-VDAIVDSGAGTLEATT 182
Query: 199 VVDMTGTYPKIIRQGKGPKLYW 220
V+D+TG P+++R G GP +
Sbjct: 183 VIDLTGPAPEVLRPGLGPVAFL 204
>gi|325300388|ref|YP_004260305.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides salanitronis DSM
18170]
gi|324319941|gb|ADY37832.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides salanitronis DSM
18170]
Length = 203
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 121/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ +V++L +G + + PTDT+YA+ C IE++ R+KN+ P K LSI+C L +I
Sbjct: 15 LQHIVDILNDGGIIIYPTDTMYAMGCHALKERPIEKICRLKNLNPKKNNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y G+A F+ +K LPGP+TFIL A +PK + RK V
Sbjct: 75 SEYAQ-------VGNAT-FKLMKRNLPGPFTFILKADSRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWL--KDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P + I + I + +DAP+++T++ +D E++ DP +I + +G E +D V+DGG+
Sbjct: 117 GIRVPGNPIIREICRLLDAPILTTTLPLHEGEDIEYVTDPELIDEKFGDE-VDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPSTV++ P+I+RQGKG
Sbjct: 176 GGVEPSTVINCCEDMPEIVRQGKG 199
>gi|443327055|ref|ZP_21055690.1| Sua5/YciO/YrdC/YwlC family protein [Xenococcus sp. PCC 7305]
gi|442793344|gb|ELS02796.1| Sua5/YciO/YrdC/YwlC family protein [Xenococcus sp. PCC 7305]
Length = 217
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 50/239 (20%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++ + LK GAV + PTDT+YAI CDL + SA++++RRIK + KPL
Sbjct: 6 ELHPENPQRRTIDQITSALKSGAVMLYPTDTVYAIGCDLSNKSAVQKVRRIKQLSNEKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y Q +R +KH +PGPYTF+L A+K VPK +
Sbjct: 66 TFLCSSLSNIAQY--------AQVSDRAYRIMKHLVPGPYTFLLPATKLVPKLVMSPK-- 115
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTS-----------------VKWLKDNE 166
RK G+R+PN ICQ +L+ + P++S+S + D E
Sbjct: 116 ------RKTTGIRVPNRLICQELLEALGNPIVSSSAHLPDEDGDFPTIGVEKARLFDDLE 169
Query: 167 WMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+VD ++I D+ P G D ST++D T P+++RQGKG W E E+
Sbjct: 170 NLVD-IIIDDSTEP-GFDV-----------STILDFTTEEPQVVRQGKG----WQEVEN 211
>gi|428209745|ref|YP_007094098.1| translation factor SUA5 [Chroococcidiopsis thermalis PCC 7203]
gi|428011666|gb|AFY90229.1| translation factor SUA5 [Chroococcidiopsis thermalis PCC 7203]
Length = 216
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 117/216 (54%), Gaps = 23/216 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +E ++ L++GAV + PTDT+YAI CDL S SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQTRTVEEIIAALRDGAVMLYPTDTVYAIGCDLNSKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY +R ++H +PG YTF+L A+K VPK +
Sbjct: 69 CPSLSNVATYAIVSDPA--------YRIMRHLIPGSYTFLLPATKLVPK--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDP--VVIADTYGPEGLD 184
RK G+R+PN IC A+L + P+ISTS ++ P ++ + LD
Sbjct: 113 NPKRKTTGIRVPNHKICAALLNTLGNPIISTSAHLPQNGNGRSAPAEANLSRVELFDRLD 172
Query: 185 FVV-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+V DG E ST++DMT P+IIRQGKG
Sbjct: 173 NIVDAIVDDGSEPEDEVSTIIDMTTDEPEIIRQGKG 208
>gi|375256127|ref|YP_005015294.1| Sua5/YciO/YrdC/YwlC family protein [Tannerella forsythia ATCC
43037]
gi|363408397|gb|AEW22083.1| Sua5/YciO/YrdC/YwlC family protein [Tannerella forsythia ATCC
43037]
Length = 204
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 121/219 (55%), Gaps = 23/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + ++ VV +L++G + + PTDTLYA+ CD A+E++ RIK V P
Sbjct: 1 MLLKIYPDHPNRKDIDKVVNVLRDGGLVIYPTDTLYAMGCDALDVRAVEKICRIKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L + Y + + ++F+ +K CLPGP+TFIL S E+PK
Sbjct: 61 KSNLSIICPDLSSVSEY--------ARINNHVFKLMKRCLPGPFTFILPTSGELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
Y RK VG+R+P++ I + + + PL+S SV + N E+ DP +I +
Sbjct: 109 ------IYKSRKEVGIRVPDNPIVRELADALGNPLLSMSVYDRESNDEPEYFTDPELIEE 162
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y + +D V+DGG E STVVD T I+RQG+G
Sbjct: 163 KYAGQ-VDLVIDGGYGCTEGSTVVDCTQEPFSIVRQGRG 200
>gi|89902007|ref|YP_524478.1| Sua5/YciO/YrdC/YwlC [Rhodoferax ferrireducens T118]
gi|89346744|gb|ABD70947.1| Sua5/YciO/YrdC/YwlC [Rhodoferax ferrireducens T118]
Length = 207
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 17/212 (8%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P L+ + LL +G + VPTD+ YA+VC L +A ++LRRI+ V+ L
Sbjct: 6 EVHPDNPQPRLLKQAITLLDQGDILAVPTDSSYALVCHLDDKAAADKLRRIRGVDDKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y Q FR +K PGPYTFIL ASKEVP++
Sbjct: 66 TLLCRDLSELANY--------AQVDNQQFRRIKSATPGPYTFILQASKEVPRRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK +G+R+P + QA+L + PL++T++ + E + D + I + Y + +
Sbjct: 112 --SHPSRKTIGLRVPEHKVLQALLDLHNGPLLATTLIPPGEVEPINDALEIRERYKKQ-I 168
Query: 184 DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+D G EP+TVVD+T + P +IRQG+G
Sbjct: 169 AAVIDAGACPREPTTVVDLTESEPIVIRQGRG 200
>gi|300769987|ref|ZP_07079866.1| Sua5/YciO/YrdC/YwlC family protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762463|gb|EFK59280.1| Sua5/YciO/YrdC/YwlC family protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 206
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 19/217 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + + + ++ VV++LK G V + PTDT+Y I CD+ +H AIER+ I+ ++
Sbjct: 1 MLIRIYENNPNEKAIQQVVDVLKRGGVIIYPTDTVYGIGCDITNHKAIERVCEIRGMKVD 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L DI YT F ++FR +K LPGP+TFI AS +VPK
Sbjct: 61 KANLSFICYDLTDISQYTKPF-------DTSVFRVLKKALPGPFTFIFNASGQVPKLL-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
S +K VG+R+P++ I + I++ + P+++ S++ D E+ DP +I + Y
Sbjct: 112 -------SSKKKTVGIRVPDNHIVREIVRVLGNPIVTASIRDEDDILEYSTDPELIHEKY 164
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STVVD+TG +I+R+GKG
Sbjct: 165 -ENMVDLVIDGGYGDNVASTVVDLTGGDFEIVREGKG 200
>gi|83719037|ref|YP_442432.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
E264]
gi|167619438|ref|ZP_02388069.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis Bt4]
gi|257138635|ref|ZP_05586897.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
E264]
gi|83652862|gb|ABC36925.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
E264]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ T+ R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELATFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG EPSTV+D+TG P+++R G+GP
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGP 201
>gi|326318414|ref|YP_004236086.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375250|gb|ADX47519.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 211
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 21/220 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P L+ LL GAV VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 3 QYFEVHPDNPQPRLLKQAAALLARGAVLAVPTDSSYALVCQLDDKDAVDRLRRIRQVDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R VK PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSEVSNYA----RVDNRQ----YRLVKQATPGPYTFILDATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +L+ APL++T++ + E M DP I +
Sbjct: 112 -----SHPQRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPPGETEPMNDPAEIRARFEH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKGP 216
+ +D VVD G EP+TVVD+ TG P+++R+G+GP
Sbjct: 167 Q-IDAVVDAGACPLEPTTVVDLTDMATGGDPRVVREGRGP 205
>gi|386814763|ref|ZP_10101981.1| Sua5/YciO/YrdC/YwlC family protein [Thiothrix nivea DSM 5205]
gi|386419339|gb|EIJ33174.1| Sua5/YciO/YrdC/YwlC family protein [Thiothrix nivea DSM 5205]
Length = 208
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 18/223 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + + ++++G V V PTD+ YAI C L SA+ER++RI+ V+
Sbjct: 4 YFQIHPDNPQIRLVRQALNIIRDGGVVVFPTDSSYAIGCHLGDKSAMERIQRIRRVDNKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I Y Q +R +K PGPYTFIL A++EVP++
Sbjct: 64 NFTLVCRDLSEISLY--------AQVDNINYRLIKSLTPGPYTFILPATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP+ + QA+LQ+++ PL+S+++ ++ M+DP I + +
Sbjct: 112 ----QNPKRKTIGIRIPDHIVTQALLQELNEPLMSSTLILPGEDLPMIDPYQIRLSLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEE 224
+D ++DGG EP+TVVD+ P I+R+GKG + W+ E
Sbjct: 168 -VDLIIDGGFCGHEPTTVVDLMEDRPVILREGKG-GVDWLVEH 208
>gi|335042178|ref|ZP_08535205.1| putative translation factor [Methylophaga aminisulfidivorans MP]
gi|333788792|gb|EGL54674.1| putative translation factor [Methylophaga aminisulfidivorans MP]
Length = 207
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ E+++ G + V PTD+ YA+ C + + A+ERLRRI+ ++
Sbjct: 4 FFQIHPDNPQVRLIKQACEIIRRGGLIVYPTDSGYALGCQIGDNDAMERLRRIRQLDADH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + + +FR +K PGPYTF+L A+KEVP+K
Sbjct: 64 NFTLVCRDLSELSTY--------AKFNNAVFRLLKAYTPGPYTFVLPATKEVPRKL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+RIP I A+L++++ PL+S+++ D+ M D I D G +
Sbjct: 112 ----QHPKRKTIGLRIPEHTIALALLEELNEPLMSSTLILPGDDMPMTDAEDIVDAIGKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG AEP+TVV+ P++ R G G
Sbjct: 168 -VDLIIDGGACGAEPTTVVEFVDDLPEVTRYGMG 200
>gi|270294398|ref|ZP_06200600.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D20]
gi|270275865|gb|EFA21725.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. D20]
Length = 204
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V++LL +G + + PTDT+YAI C AIER+ R+K+++P K LSI+C L +
Sbjct: 15 LQQVIDLLNDGGILIYPTDTMYAIGCHGLKERAIERICRLKDIDPKKNNLSIICYDLSKV 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I Q I + +DAP+++T++ +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIQEIARLLDAPIMTTTLPHDDNEDIEYCTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD T P+IIRQG G W++E
Sbjct: 176 GGTEGSTVVDCTNGEPEIIRQGLG----WLDE 203
>gi|254282932|ref|ZP_04957900.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium NOR51-B]
gi|219679135|gb|EED35484.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium NOR51-B]
Length = 208
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V ++ +G V V PTD+ YA+ C L + SA+ER+RRI+ ++ S
Sbjct: 4 FFAIHPENPQARLVAQAVTIVNKGGVIVYPTDSAYALGCLLGNKSALERIRRIRQLDDSH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y R D +R ++ PGP+TFIL A++EVPK+
Sbjct: 64 NFTLVCRDLSELGNYA----RVDNTA----YRLIRAHTPGPFTFILEATREVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++AI QA+L ++DAP++S ++ D + DP I D
Sbjct: 112 ----QHPKRKTIGLRVPDNAIAQALLAELDAPMMSVTLIMPDDEYPLTDPYDIRDIL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP++VVDMT P+I R+G G
Sbjct: 167 HVDAVIDGGYCGLEPTSVVDMTCDPPEITRRGLG 200
>gi|161524350|ref|YP_001579362.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans ATCC
17616]
gi|189350896|ref|YP_001946524.1| putative translation factor [Burkholderia multivorans ATCC 17616]
gi|221198404|ref|ZP_03571450.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD2M]
gi|221208919|ref|ZP_03581916.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD2]
gi|221214750|ref|ZP_03587719.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD1]
gi|421473620|ref|ZP_15921719.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans ATCC
BAA-247]
gi|421478484|ref|ZP_15926237.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CF2]
gi|160341779|gb|ABX14865.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans ATCC
17616]
gi|189334918|dbj|BAG43988.1| putative translation factor [Burkholderia multivorans ATCC 17616]
gi|221165289|gb|EED97766.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD1]
gi|221171202|gb|EEE03652.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD2]
gi|221182336|gb|EEE14737.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CGD2M]
gi|400220626|gb|EJO51147.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans ATCC
BAA-247]
gi|400224678|gb|EJO54896.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia multivorans CF2]
Length = 210
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDVPQLVRAGRG 200
>gi|256419763|ref|YP_003120416.1| Sua5/YciO/YrdC/YwlC family protein [Chitinophaga pinensis DSM 2588]
gi|256034671|gb|ACU58215.1| Sua5/YciO/YrdC/YwlC family protein [Chitinophaga pinensis DSM 2588]
Length = 205
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 18/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + L+ +VE LK+G V + PTDT+Y + CD+ A+ER+ RIK++ P+
Sbjct: 1 MLLTVHPDNPNPRHLKTIVECLKDGGVIIYPTDTVYGMGCDICQPKAVERICRIKHINPA 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L + Y FR +K LPGPYTFIL+AS+ VP+ +
Sbjct: 61 KAQFSFICYDLSHLSDYAKSV-------DTPTFRMLKKALPGPYTFILSASRAVPRLLKQ 113
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
T VG+R+P++ I +AI++++ P++STS+ E DP +I + +G
Sbjct: 114 KKDT---------VGIRVPDNNISRAIVKELGNPILSTSLPIETYVEEYTDPEIIHEKFG 164
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVDGG+ STVVD TG P++IR+G G
Sbjct: 165 -SIVDIVVDGGIGGMTFSTVVDCTGDEPELIREGAG 199
>gi|319901221|ref|YP_004160949.1| translation factor SUA5 [Bacteroides helcogenes P 36-108]
gi|319416252|gb|ADV43363.1| translation factor SUA5 [Bacteroides helcogenes P 36-108]
Length = 204
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ ++ LL +G + + PTDT+YAI C AIER+ ++K+++P K LSI+C L I
Sbjct: 15 LQQIINLLNDGGIIIYPTDTMYAIGCHALKERAIERICQLKDIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNNTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+ +I + I + +DAP+++T++ + +D E+ DP +I + +G +D ++DGG+
Sbjct: 117 GIRMPDSSIIREIARLLDAPIMTTTLPYDDSEDIEYATDPELINEKFG-NTVDLIIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E ST+VD T +I+RQGKG W++E
Sbjct: 176 GGTEGSTIVDCTNGETEIVRQGKG----WLDE 203
>gi|290770141|gb|ADD61901.1| putative protein [uncultured organism]
Length = 204
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V++LL +G + + PTDT+YAI C AIER+ R+K+++P K LSI+C L +
Sbjct: 15 LQQVIDLLNDGGILIYPTDTMYAIGCHGLKERAIERICRLKDIDPKKNNLSIICYDLSKV 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+++I Q I + +DAP+++T++ +D E+ DP +I + +G + +D V+DGG+
Sbjct: 117 GIRMPDNSIIQEIARLLDAPIMTTTLPHDDNEDIEYCTDPELIDEKFG-DIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD T P+IIRQG G W++E
Sbjct: 176 GGTEGSTVVDCTNGEPEIIRQGVG----WLDE 203
>gi|227538437|ref|ZP_03968486.1| RNA binding protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241719|gb|EEI91734.1| RNA binding protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 206
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 19/217 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + + + ++ VV++LK G V + PTDT+Y I CD+ +H AIER+ I+ ++
Sbjct: 1 MLIRIYENNPNEKAIQQVVDVLKRGGVIIYPTDTVYGIGCDITNHKAIERVCEIRGLKVD 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L DI YT F ++FR +K LPGP+TFI AS +VPK
Sbjct: 61 KANLSFICYDLTDISQYTKPF-------DTSVFRVLKKALPGPFTFIFNASGQVPKLL-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
S +K VG+R+P++ I + I++ + P+++TS++ D E+ DP +I + Y
Sbjct: 112 -------SSKKKTVGIRVPDNHIVREIVRVLGNPIVTTSIRDEDDILEYSTDPELIHEKY 164
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STVVD+T +I+R+GKG
Sbjct: 165 -ENMVDLVIDGGYGDNVASTVVDLTNGDFEIVREGKG 200
>gi|421870223|ref|ZP_16301858.1| YciO family [Burkholderia cenocepacia H111]
gi|358069749|emb|CCE52736.1| YciO family [Burkholderia cenocepacia H111]
Length = 210
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAAEIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I T +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIR-TRLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P++IR G+G
Sbjct: 167 QVDLVIDGGACPREPSTVIDLTGDAPELIRAGRG 200
>gi|392409525|ref|YP_006446132.1| translation factor SUA5 [Desulfomonile tiedjei DSM 6799]
gi|390622661|gb|AFM23868.1| translation factor SUA5 [Desulfomonile tiedjei DSM 6799]
Length = 202
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 127/215 (59%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ + + ++E +V++L+ + PTDT+Y + CD+ S A++++RRIK ++
Sbjct: 1 MILQINEAYPQPRRIEKIVQVLRSEGTIIYPTDTVYGLGCDIHSKKALDKVRRIKKMDNK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS + L+ I Y Q + ++ ++ LPGPYTF+L A++ VP+ +
Sbjct: 61 RPLSFVFADLKSIAQY--------AQVEDSDYKILRKYLPGPYTFVLNATRLVPRIVL-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R VG+RIP++ ICQA++ ++ P++S+SV+ L D++ + DP I Y
Sbjct: 111 -------TKRNEVGIRIPDNKICQALVTELGNPILSSSVR-LPDDQLLWDPKEIDRIYKG 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D VVDGG V EPSTV+ + P ++R+GKG
Sbjct: 163 Q-VDLVVDGGDFVPEPSTVISLVDGAPVVLREGKG 196
>gi|85059382|ref|YP_455084.1| hypothetical protein SG1404 [Sodalis glossinidius str. 'morsitans']
gi|84779902|dbj|BAE74679.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 206
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V+LL++GAV V PTD+ YA+ C L+ +A+ER+ RI+ ++
Sbjct: 4 FFTLHPDNPQPRLVSQAVDLLRKGAVIVYPTDSGYALGCQLEDKTAMERICRIRQLDGHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY Q FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLVCRDLSELSTY--------AQVDNQAFRLMKNNTPGKYTFILKATKEVPRRLMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L+ +D P++ST++ ++ DP I D G +
Sbjct: 114 ------DKRKTIGLRVPSNPIALALLEVLDKPMMSTTLMLPGNDFAESDPESICDHLGKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+ GG +P+TV+D+T P+++RQG G
Sbjct: 168 -VDLVIHGGFLGQQPTTVIDLTDPTPRVVRQGVG 200
>gi|411008633|ref|ZP_11384962.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas aquariorum AAK1]
gi|423197444|ref|ZP_17184027.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas hydrophila SSU]
gi|404631132|gb|EKB27768.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas hydrophila SSU]
Length = 206
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++++ G V V PTD+ YA+ C + A+ER+ RI+ ++P+ +++
Sbjct: 9 PENPQARLISQAVQIIQNGGVIVYPTDSGYALGCQMGDKGALERICRIRRIDPNHDFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + + FR +K+ PGPYTFI A+KEVP++ +
Sbjct: 69 CRDLSEISTY--------AKVDNSAFRLIKNNTPGPYTFIFKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+P++ I QA+L+ + PL+ST++ + + DP I D G + LD V
Sbjct: 114 -EKKKSIGIRVPDNKIAQALLEALGEPLLSTTLILPESDMAEFDPEEIFDKLGKQ-LDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+GG +P+TVVD + P + R+G G
Sbjct: 172 VNGGYLGEQPTTVVDFSDDEPVLRRRGAG 200
>gi|78066874|ref|YP_369643.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. 383]
gi|77967619|gb|ABB08999.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. 383]
Length = 210
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVEIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + +P I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNEPEEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGEEPELVRAGRG 200
>gi|150004545|ref|YP_001299289.1| hypothetical protein BVU_1995 [Bacteroides vulgatus ATCC 8482]
gi|319643977|ref|ZP_07998552.1| hypothetical protein HMPREF9011_04155 [Bacteroides sp. 3_1_40A]
gi|345518217|ref|ZP_08797671.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 4_3_47FAA]
gi|423312445|ref|ZP_17290382.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides vulgatus
CL09T03C04]
gi|149932969|gb|ABR39667.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|254835510|gb|EET15819.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 4_3_47FAA]
gi|317384501|gb|EFV65468.1| hypothetical protein HMPREF9011_04155 [Bacteroides sp. 3_1_40A]
gi|392688133|gb|EIY81422.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides vulgatus
CL09T03C04]
Length = 204
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
LE V+ +L+EG + + PTDT+YAI C AIER+ ++KN++P K LSI+C L +I
Sbjct: 15 LEEVIRILEEGGLIIYPTDTMYAIGCHGLKERAIERICKLKNIDPRKNNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPGP+TFIL +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGPFTFILNTGNRLPK----------IFKNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTS--VKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + AP+++T+ +K +D E++ P +I + +G E ++ ++DGG+
Sbjct: 117 GIRVPDNNIIREICHILKAPIMTTTLPLKDGEDIEYITTPELIEEKFGKE-VELIIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPST+V+ T +I+RQGKG
Sbjct: 176 GSIEPSTIVNCTNGEAEIVRQGKG 199
>gi|53719872|ref|YP_108858.1| hypothetical protein BPSL2262 [Burkholderia pseudomallei K96243]
gi|53723777|ref|YP_103302.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei ATCC 23344]
gi|76812077|ref|YP_334088.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1710b]
gi|121599611|ref|YP_993496.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei SAVP1]
gi|124385702|ref|YP_001029074.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei NCTC 10229]
gi|126440920|ref|YP_001059595.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 668]
gi|126450648|ref|YP_001081004.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei NCTC 10247]
gi|126453661|ref|YP_001066876.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1106a]
gi|134277533|ref|ZP_01764248.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 305]
gi|167001768|ref|ZP_02267560.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei PRL-20]
gi|167720315|ref|ZP_02403551.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei DM98]
gi|167816526|ref|ZP_02448206.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 91]
gi|167824921|ref|ZP_02456392.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 9]
gi|167846438|ref|ZP_02471946.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
B7210]
gi|167895016|ref|ZP_02482418.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 7894]
gi|167903401|ref|ZP_02490606.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911654|ref|ZP_02498745.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 112]
gi|167919652|ref|ZP_02506743.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
BCC215]
gi|217420441|ref|ZP_03451946.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 576]
gi|226198927|ref|ZP_03794490.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237812987|ref|YP_002897438.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
MSHR346]
gi|238561611|ref|ZP_00441723.2| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei GB8 horse
4]
gi|242315443|ref|ZP_04814459.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1106b]
gi|254177849|ref|ZP_04884504.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei ATCC 10399]
gi|254184394|ref|ZP_04890984.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 1655]
gi|254191427|ref|ZP_04897931.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254195745|ref|ZP_04902171.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei S13]
gi|254200256|ref|ZP_04906622.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei FMH]
gi|254209334|ref|ZP_04915680.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei JHU]
gi|254261445|ref|ZP_04952499.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1710a]
gi|254297059|ref|ZP_04964512.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 406e]
gi|254357996|ref|ZP_04974269.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei 2002721280]
gi|386861168|ref|YP_006274117.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1026b]
gi|403519301|ref|YP_006653435.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
BPC006]
gi|418382597|ref|ZP_12966544.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 354a]
gi|418533602|ref|ZP_13099464.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1026a]
gi|418544781|ref|ZP_13110053.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1258a]
gi|418551774|ref|ZP_13116679.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1258b]
gi|418552928|ref|ZP_13117771.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 354e]
gi|52210286|emb|CAH36265.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52427200|gb|AAU47793.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei ATCC 23344]
gi|76581530|gb|ABA51005.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1710b]
gi|121228421|gb|ABM50939.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei SAVP1]
gi|124293722|gb|ABN02991.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei NCTC 10229]
gi|126220413|gb|ABN83919.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 668]
gi|126227303|gb|ABN90843.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1106a]
gi|126243518|gb|ABO06611.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei NCTC 10247]
gi|134251183|gb|EBA51262.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 305]
gi|147749852|gb|EDK56926.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei FMH]
gi|147750107|gb|EDK57178.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei JHU]
gi|148027123|gb|EDK85144.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei 2002721280]
gi|157807680|gb|EDO84850.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 406e]
gi|157939099|gb|EDO94769.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160698888|gb|EDP88858.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei ATCC 10399]
gi|169652490|gb|EDS85183.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei S13]
gi|184214925|gb|EDU11968.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 1655]
gi|217395853|gb|EEC35870.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 576]
gi|225929027|gb|EEH25051.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237505250|gb|ACQ97568.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
MSHR346]
gi|238524204|gb|EEP87638.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei GB8 horse
4]
gi|242138682|gb|EES25084.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1106b]
gi|243062460|gb|EES44646.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia mallei PRL-20]
gi|254220134|gb|EET09518.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1710a]
gi|385346847|gb|EIF53520.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1258b]
gi|385348075|gb|EIF54714.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1258a]
gi|385360885|gb|EIF66789.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1026a]
gi|385372337|gb|EIF77455.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 354e]
gi|385377211|gb|EIF81818.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 354a]
gi|385658296|gb|AFI65719.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
1026b]
gi|403074944|gb|AFR16524.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei
BPC006]
Length = 209
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 17/197 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ + LS+L R L ++ T+
Sbjct: 22 EIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDDKQHLSLLVRDLSELATFAMV 81
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
R +R +K PGPY FIL A+KEVP++ + RK +G+R+P
Sbjct: 82 DNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL--------SHPSRKTIGLRVPA 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
AI A+L+ + PL+ T++ D+E + DP I + +D V+DGG EPSTV
Sbjct: 126 HAITLALLEALGQPLLGTTLILPPDDEPLNDPEEIRARLEKQ-VDLVIDGGACPREPSTV 184
Query: 200 VDMTGTYPKIIRQGKGP 216
+D+TG P+++R G+GP
Sbjct: 185 IDLTGDEPQLVRAGRGP 201
>gi|374622417|ref|ZP_09694942.1| SUA5/YciO/YrdC/YwlC family protein [Ectothiorhodospira sp. PHS-1]
gi|373941543|gb|EHQ52088.1| SUA5/YciO/YrdC/YwlC family protein [Ectothiorhodospira sp. PHS-1]
Length = 208
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 125/213 (58%), Gaps = 17/213 (7%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P ++ VVE++++G V V PTD+ YA+ C + + S +ER+RRI+ ++
Sbjct: 5 IEIHPVDPQPRLIQQVVEVVQDGGVIVYPTDSCYALGCAISNKSGMERIRRIRQLDEQYH 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+++CR L +I TY G+ + +R +K PGPY F+L A+ EVP++
Sbjct: 65 LTLVCRDLSEIATYAK-------VGNTS-YRLLKSLTPGPYAFLLKATHEVPRRL----- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
++ RK VG+R+P+ I QA+L+ + PL+S+S++ D+ + D I + +
Sbjct: 112 ---QHPKRKSVGLRVPDHPITQAMLKSLGQPLMSSSLEMPGDDLPLTDIYEIQERLSSQ- 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TV+DM P+++R+GKG
Sbjct: 168 VDLIIDGGPCGLEPTTVIDMESDVPRLVRRGKG 200
>gi|312796685|ref|YP_004029607.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia rhizoxinica HKI
454]
gi|312168460|emb|CBW75463.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia rhizoxinica HKI
454]
Length = 209
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ +++ G V +PTD+ YA+ C L +A+E+LRRI+ + +
Sbjct: 4 YFRIHPDNPQPRLIKQAAQIIDGGGVVALPTDSSYALACHLDDKAAVEQLRRIRGLNERR 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS++ R L ++ T+ R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLMVRDLSELATFAMVDNRQ--------YRLIKAVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + P+I++++ D+E + +P I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLEALGQPVIASTLILPGDDEPLNEPEAIRAQLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
LD V+DGG AEPSTV+D++G P ++R G+GP
Sbjct: 168 -LDLVIDGGACAAEPSTVIDLSGDAPVLVRVGRGP 201
>gi|167563323|ref|ZP_02356239.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia oklahomensis
EO147]
Length = 209
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELAAFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPAHAITLALLEALGQPLLGTTLILSPDDEPLNDPEEIRTRLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
D V+DGG EPSTV+D+TG P+++R G+GP
Sbjct: 168 A-DLVIDGGACPREPSTVIDLTGDEPQLVRAGRGP 201
>gi|298208805|ref|YP_003716984.1| Sua5/yciO/yrdC family protein [Croceibacter atlanticus HTCC2559]
gi|83848732|gb|EAP86601.1| putative Sua5/yciO/yrdC family protein [Croceibacter atlanticus
HTCC2559]
Length = 206
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VV L++GA+ + PTDT+Y + CD+ + SA+ER+ ++KNV+ K S +C L +
Sbjct: 16 QIKQVVNALRDGALVIYPTDTVYGLGCDISNVSALERIAKLKNVKLEKANFSFICEDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K CLPGPYTFIL + +P + +K
Sbjct: 76 LSDYVK-------QIDTRTFKILKRCLPGPYTFILPGNNNLPN----------VFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P+++IC A++ + P+ISTS++ D E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNSICNALVSGLGNPIISTSIRDEDDVIEYTTDPSLILEKWDKH-VDIVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D+TG ++IR+GKG
Sbjct: 178 GDNIASTVIDLTGDEAEVIREGKG 201
>gi|338214835|ref|YP_004658898.1| Sua5/YciO/YrdC/YwlC family protein [Runella slithyformis DSM 19594]
gi|336308664|gb|AEI51766.1| Sua5/YciO/YrdC/YwlC family protein [Runella slithyformis DSM 19594]
Length = 205
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 123/218 (56%), Gaps = 25/218 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++ P + K++ VV L++G + + PTDT+YA+ CD+ + A+ER+ RIK ++P K
Sbjct: 5 FIHIHPQTPEPRKIQQVVSSLRDGGIVIYPTDTVYALGCDIHNARAVERIARIKGIKPHK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L I Y + F+ +K LPGP+TFIL A+ +VPK
Sbjct: 65 NDFSFICHDLSHISDY--------ARVSNAAFKVMKRLLPGPFTFILEANNKVPKVLAN- 115
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM---VDPVVIADT 177
RK VG+R+P+ I + I+ ++D P+I+TS+K D+E+M DP +I +
Sbjct: 116 ---------RKTVGIRVPDHPITRLIVFELDHPIITTSIK--DDDEFMEYPTDPDIIFER 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + +D V+DGG PSTV+D T + +IIR+G G
Sbjct: 165 FQHQ-VDIVIDGGFGGLIPSTVIDATDDHFEIIREGAG 201
>gi|120612352|ref|YP_972030.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax citrulli AAC00-1]
gi|120590816|gb|ABM34256.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax citrulli AAC00-1]
Length = 211
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 21/220 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P L+ LL GAV VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 3 QYFEVHPDNPQPRLLKQAAALLARGAVLAVPTDSSYALVCQLDDKDAVDRLRRIRQVDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R VK PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSEVSNYA----RVDNRQ----YRLVKQATPGPYTFILDATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +L+ APL++T++ + E M DP I +
Sbjct: 112 -----SHPQRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPPGETEPMNDPSEIRARFEH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKGP 216
+ +D VVD G EP+TVVD+ TG P+++R+G+GP
Sbjct: 167 Q-IDAVVDAGACPLEPTTVVDLTDMATGGDPRVVREGRGP 205
>gi|67920201|ref|ZP_00513721.1| Sua5/YciO/YrdC/YwlC [Crocosphaera watsonii WH 8501]
gi|67857685|gb|EAM52924.1| Sua5/YciO/YrdC/YwlC [Crocosphaera watsonii WH 8501]
Length = 217
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 26/224 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +++ + L++GA+ + PTDT+YAI CDL S SA++R+R++K + KPL+ L
Sbjct: 9 PKNPQNHRIDEICSALRQGAIMLYPTDTVYAIGCDLNSKSAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNIAKY--------AGVEDEAYRVMKRLIPGPYTFLLPATKAVPKLVMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-KDNEW---MVDPVVIADTYGPEG 182
RK G+R+P+ ICQAILQ ++ P++STS +D E+ ++ V + D +
Sbjct: 114 -PKRKSTGIRVPDHPICQAILQGLENPIVSTSAHLPDEDGEFPTLGLEKVKLFDILENQ- 171
Query: 183 LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+D ++D + E ST++DMT P IIRQG G W E ++
Sbjct: 172 VDIIIDNSLEPGFEVSTILDMTSDPPSIIRQGLG----WEELQN 211
>gi|393775433|ref|ZP_10363746.1| hypothetical protein MW7_0407 [Ralstonia sp. PBA]
gi|392717483|gb|EIZ05044.1| hypothetical protein MW7_0407 [Ralstonia sp. PBA]
Length = 207
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 124/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ ++L++G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAAQILRDGGLAALPTDSSYALACHLDDKAAVERLRRLRGMDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L + T F R D + +R +K PGP+ FIL A+KEVP++
Sbjct: 64 LLTLMCRDLSQLGT----FARVDNRQ----YRWIKGATPGPFVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI Q +++ + P++S +++ ++E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPEHAIPQCLIEALGEPILSATLQLAGEDEPLNDPDEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG AEP++V+D++G P+++R+G+G
Sbjct: 168 -LDLVIDGGPVPAEPTSVIDLSGGEPELVRRGRG 200
>gi|374264078|ref|ZP_09622623.1| hypothetical protein LDG_9094 [Legionella drancourtii LLAP12]
gi|363535645|gb|EHL29094.1| hypothetical protein LDG_9094 [Legionella drancourtii LLAP12]
Length = 206
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + L ++++G V V PTD+ YA+ C L + +A+ER+RR++ ++ +
Sbjct: 4 FFALHPDNPQARLLRKAATIIEDGGVIVYPTDSGYALGCSLGNKAALERIRRLRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L + TY + IFR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NMTLVCRDLSQLGTY--------ARVPNPIFRLLKVLTPGSYTFILNATHEVPRLML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K +G+R+P++ I A+L+ ++APL+S+++ + +P I D G +
Sbjct: 113 -----HPKKKTLGLRVPDNLITLALLETLEAPLMSSTLILPGAKAPLSEPEAIRDILGNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVD+TG YP I+R+GKG
Sbjct: 168 -VDLVIDGGNCGQEPTTVVDLTGDYPVILREGKG 200
>gi|149374416|ref|ZP_01892190.1| hypothetical protein MDG893_10226 [Marinobacter algicola DG893]
gi|149361119|gb|EDM49569.1| hypothetical protein MDG893_10226 [Marinobacter algicola DG893]
Length = 207
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + V++L++G V V PTD+ YAI C L A +R++RI+ ++
Sbjct: 4 FFQIHPETPQKRLINQAVDILRKGGVIVYPTDSAYAIGCHLGDKQAADRIKRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L DI + + +R +K+ PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLMCRDLSDIGVF--------AKVDNTQYRLLKNFTPGAYTFILDATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI QA+L ++ P++S+++ D + M DP I +T E
Sbjct: 113 -----HPKRKTIGMRVPDNAIVQALLAELGEPIMSSTLILPGDEDPMTDPYDIRETLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG E +TVV+MTG P++ R GKG
Sbjct: 168 -LDLIIDGGFCGLEATTVVNMTGDAPEVTRVGKG 200
>gi|323455538|gb|EGB11406.1| hypothetical protein AURANDRAFT_61842 [Aureococcus anophagefferens]
Length = 267
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 17/224 (7%)
Query: 2 YVEADPSGADSWKLEP-VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEP- 59
Y++ G+D+W+L+ ++ L G VGV+PTDT Y+ V + S +A++RL +K E
Sbjct: 55 YLDVLADGSDAWRLDDDIIGTLNRGGVGVIPTDTSYSFVARVDSKAAVQRLLALKGDENR 114
Query: 60 SKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
KPLS+LC L ID YT F+ +K LPGPYT IL AS+ +P+ +
Sbjct: 115 KKPLSLLCADLGTIDEYTR-------YTSKRTFKLLKAALPGPYTMILPASEALPRMIYK 167
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVI---AD 176
G K R VGVRIP+D +C IL ++D PL +SV D + +V + + A
Sbjct: 168 GGARRWK---RDTVGVRIPDDPVCAHILSQVDGPLFCSSVPTSDDGDQLVCRLPLEGDAQ 224
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDM-TGTYPKIIRQGKGPKLY 219
T+ +DFVVD G R E STV D+ + P I+R+G GP ++
Sbjct: 225 TWCAL-VDFVVDAGARPIEGSTVYDLASDDAPAILREGLGPPVH 267
>gi|365088285|ref|ZP_09327882.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. NO-1]
gi|363417265|gb|EHL24350.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. NO-1]
Length = 211
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL++G + VPTD+ YA+VC L A++R+RRI+ V+
Sbjct: 4 YFEVHPDNPQPRLLKQGAMLLQKGGILAVPTDSSYALVCHLDDKDAVDRMRRIRQVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ Q +L+ APL++T++ + E + DP I D Y +
Sbjct: 112 ----SHPSRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPAGETEPLNDPQEIRDRY-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
LD +VD G EP+TVVD+T G P++IR+G+G
Sbjct: 167 LLDAIVDAGACPLEPTTVVDLTPMGAGGDPEVIREGRG 204
>gi|416375205|ref|ZP_11683328.1| Sua5/YciO/YrdC/YwlC [Crocosphaera watsonii WH 0003]
gi|357266555|gb|EHJ15165.1| Sua5/YciO/YrdC/YwlC [Crocosphaera watsonii WH 0003]
Length = 217
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 26/224 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +++ + L++GA+ + PTDT+YAI CDL S SA++R+R++K + KPL+ L
Sbjct: 9 PKNPQNRRIDEICSALRQGAIMLYPTDTVYAIGCDLNSKSAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNIAKY--------AGVEDEAYRVMKRLIPGPYTFLLPATKAVPKLVMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-KDNEW---MVDPVVIADTYGPEG 182
RK G+R+P+ ICQAILQ ++ P++STS +D E+ ++ V + D +
Sbjct: 114 -PKRKSTGIRLPDHPICQAILQGLENPIVSTSAHLPDEDGEFPTLGLEKVKLFDILENQ- 171
Query: 183 LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+D ++D + E ST++DMT P IIRQG G W E ++
Sbjct: 172 VDIIIDNSLEPGFEVSTILDMTSDPPSIIRQGLG----WEELQN 211
>gi|212693543|ref|ZP_03301671.1| hypothetical protein BACDOR_03060 [Bacteroides dorei DSM 17855]
gi|237708701|ref|ZP_04539182.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265756027|ref|ZP_06090494.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_33FAA]
gi|345513509|ref|ZP_08793030.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei 5_1_36/D4]
gi|423228801|ref|ZP_17215207.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL02T00C15]
gi|423242366|ref|ZP_17223475.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL03T12C01]
gi|423247613|ref|ZP_17228661.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL02T12C06]
gi|212663796|gb|EEB24370.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei DSM 17855]
gi|229437338|gb|EEO47415.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei 5_1_36/D4]
gi|229457127|gb|EEO62848.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234105|gb|EEZ19706.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_33FAA]
gi|392631506|gb|EIY25477.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL02T12C06]
gi|392635540|gb|EIY29439.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL02T00C15]
gi|392639652|gb|EIY33468.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides dorei CL03T12C01]
Length = 204
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
LE V+ +L+EG + + PTDT+YAI C AIER+ ++KN++P K LSI+C L +I
Sbjct: 15 LEEVIRILEEGGLIIYPTDTMYAIGCHGLKERAIERICKLKNIDPRKNNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPGP+TFIL +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGPFTFILNTGNRLPK----------IFKNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTS--VKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + AP+++T+ +K +D E++ P +I + +G E ++ ++DGG+
Sbjct: 117 GIRVPDNNIIREICHILKAPIMTTTLPLKDGEDIEYITTPELIEEKFGKE-VELIIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPST+V+ T +I+RQGKG
Sbjct: 176 GNIEPSTIVNCTSGEAEIVRQGKG 199
>gi|350552239|ref|ZP_08921444.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodospira sibirica ATCC
700588]
gi|349794892|gb|EGZ48700.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodospira sibirica ATCC
700588]
Length = 208
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 126/220 (57%), Gaps = 18/220 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + ++ VE++ G + PTD+ YA+ C + + + +ER+RR++ + S
Sbjct: 5 IEIHPITPQARLIQQAVEVINAGGIIAYPTDSSYALGCAIGNKAGMERIRRLRQLNDSHH 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
+++CR L +I TY + + +R +K PGPYTF+L A+ EVP++
Sbjct: 65 FTLVCRDLSEISTY--------AKVTNSAYRLLKALTPGPYTFLLKATHEVPRRL----- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
++ RK VG+RIP++ I A+L + P+ S+++K D+ +++P + G +
Sbjct: 112 ---QHPKRKTVGLRIPDNPITLALLDALGQPISSSTLKLPHDDLPLIEPYEFKERLGTQ- 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
++ ++DGG EP+TV+D+ G P +IRQGKG ++ W+E
Sbjct: 168 VELIIDGGGCGVEPTTVIDLVGEVPDVIRQGKG-QVDWLE 206
>gi|295676914|ref|YP_003605438.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1002]
gi|295436757|gb|ADG15927.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1002]
Length = 211
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ +++ +G V +PTD+ YA+ C L A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAAQIINDGGVVALPTDSTYALACRLDDKDAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ F D +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSEL----ANFAMVDNWQ----YRLLKSVTPGPYVFVLQATKEVPRR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ T++ + E + DP I +
Sbjct: 111 ---VSHPSRKTIGLRVPDHAITLAILEELGQPLLGTTLIMPGETEPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG V EPSTV+D+TG+ P ++R G+G
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGSEPVLVRAGRG 200
>gi|387790479|ref|YP_006255544.1| Sua5/YciO/YrdC/YwlC family protein [Solitalea canadensis DSM 3403]
gi|379653312|gb|AFD06368.1| Sua5/YciO/YrdC/YwlC family protein [Solitalea canadensis DSM 3403]
Length = 204
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 23/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + +E VVE LK+G V + PTDT+Y + CD+ + AIER+ +I+ ++P
Sbjct: 1 MLLKIYPENPNPRAIEQVVECLKKGGVIIYPTDTVYGLGCDITNQKAIERVCQIRGLKPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L + YT +FR +K LPGP+TFI AS +VPK
Sbjct: 61 KANLSFICYDLSHLSNYTKPV-------DTTLFRVLKSHLPGPFTFIFNASGQVPK---- 109
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
S +K VG+R+P++ I + I+ ++ P++STS+ D+ E+ DP +I +
Sbjct: 110 -----LLNSKKKTVGIRVPDNNIAREIVNQLGNPIVSTSIH--DDDEILEYSTDPELIYE 162
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y + +D V+DGG E STVVD T +I+RQGKG
Sbjct: 163 KY-QDLVDIVIDGGYGGNEASTVVDCTDGEMEIVRQGKG 200
>gi|307729238|ref|YP_003906462.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1003]
gi|307583773|gb|ADN57171.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1003]
Length = 211
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 17/225 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++ +G V +PTD+ YA+ C L +A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIINDGGVVALPTDSSYALACHLDDKNAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL ++ PL+ +++ + + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILGELGQPLLGSTLILPGETAPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
LD V+DGG V EPSTV+D+TG P ++R G+G + EE A
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGDEPVLVRAGRGSLAPFGLEETA 211
>gi|354565252|ref|ZP_08984427.1| Sua5/YciO/YrdC/YwlC family protein [Fischerella sp. JSC-11]
gi|353549211|gb|EHC18653.1| Sua5/YciO/YrdC/YwlC family protein [Fischerella sp. JSC-11]
Length = 219
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 121/225 (53%), Gaps = 38/225 (16%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E + L +GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQPRRIEEIKTALSDGAVMLYPTDTVYAIGCDLNAKSAVERVRKIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI----FRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
C SL ++ TY AN+ +R +KH +PGPYTF+L A+K VP+
Sbjct: 69 CSSLSNVATY------------ANVSDTAYRIMKHLIPGPYTFLLPATKLVPR------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD----------NEWMVDPV 172
+ RK G+R+PN +C +L + P+ISTS D E ++ V
Sbjct: 110 -LVQSPKRKTTGIRVPNHKVCLELLSALGNPIISTSAHLPPDETNNGILGVEEEQILSRV 168
Query: 173 VIADTYGPEGL-DFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+ D EGL D +VD G + E ST++D+TG P +IRQG G
Sbjct: 169 ELFDRL--EGLVDVIVDTGEEPSYEVSTILDLTGEEPMMIRQGLG 211
>gi|416985795|ref|ZP_11938439.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. TJI49]
gi|325519096|gb|EGC98583.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. TJI49]
Length = 210
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDDPQPRLIKQAVEIVNKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLEALGQPLLGTTLILPPDDEPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|374619376|ref|ZP_09691910.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium HIMB55]
gi|374302603|gb|EHQ56787.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium HIMB55]
Length = 206
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P S + V++L EG V PTD+ YA+ C L + + ER+R+I+ +
Sbjct: 4 FFSIHPETPQSRLINQAVDILSEGGVIAYPTDSAYALGCRLDNKAGAERIRQIRKLAEDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L ++ Y R D +R +KH PGPYTFI ASKEVP++ +
Sbjct: 64 NFTLMCQDLSELSRYA----RVDNAA----YRLIKHATPGPYTFIFEASKEVPRRLMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++AI Q++L ++ PL+S ++ D+ + DP I T
Sbjct: 114 ------PKRKTIGLRVPDNAIAQSLLSQLGEPLMSVTLLLPGDDYPLSDPYDIRTTL-ER 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVDM+G +++RQG G
Sbjct: 167 DVDLVIDGGYCGLEPTTVVDMSGEEIELLRQGLG 200
>gi|421888635|ref|ZP_16319718.1| conserved hypothetical protein, translation factor domain (SUA5)
[Ralstonia solanacearum K60-1]
gi|378965999|emb|CCF96466.1| conserved hypothetical protein, translation factor domain (SUA5)
[Ralstonia solanacearum K60-1]
Length = 207
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + VE+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAVEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPEHPIPLALMAELGEPLLSATLQLPDDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++RQG+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRQGRG 200
>gi|218195427|gb|EEC77854.1| hypothetical protein OsI_17110 [Oryza sativa Indica Group]
Length = 408
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 21/219 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL GAV VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 201 YFEVHPDNPQPRLLKQAAALLARGAVLAVPTDSSYALVCQLDDKDAVDRLRRIRQVDEKH 260
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R VK PGPYTFIL A+KEVP++
Sbjct: 261 HLTLLCRDLSEVSNYA----RVDNRQ----YRLVKQATPGPYTFILDATKEVPRRV---- 308
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ Q +L+ APL++T++ + E M DP I + +
Sbjct: 309 ----SHPQRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPPGETEPMNDPSEIRARFEHQ 364
Query: 182 GLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKGP 216
+D VVD G EP+TVVD+ TG P+++R+G+GP
Sbjct: 365 -IDAVVDAGACPLEPTTVVDLTDMATGGDPRVVREGRGP 402
>gi|323526589|ref|YP_004228742.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1001]
gi|323383591|gb|ADX55682.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1001]
Length = 211
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++ +G V +PTD+ YA+ C L +A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIINDGGVVALPTDSSYALACHLDDKNAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL ++ PL+ +S+ + + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILGELGQPLLGSSLILPGETAPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG V EPSTV+D+TG P ++R G+G
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGDEPVLVRAGRG 200
>gi|371777681|ref|ZP_09484003.1| Sua5/YciO/YrdC/YwlC family protein [Anaerophaga sp. HS1]
Length = 205
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 126/218 (57%), Gaps = 20/218 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ ++E VV +L++G + + PTDT+Y + CD+ + A+ER+ RIK + P
Sbjct: 1 MLIRIHPDNPNAREIEKVVGILRDGGIVIYPTDTVYGLGCDINNTKALERISRIKGINPR 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L + +T + + F+ +K LPGP+TFIL A+ VPK
Sbjct: 61 KDHLSIICHDLSHLSDFTKPL-------NNSTFKILKKNLPGPFTFILPANNNVPKFF-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
S +K +G+RIP++AI + I++K+ P++STS+K D E+ DP +I + Y
Sbjct: 112 -------KSNKKTIGLRIPDNAIIREIVRKLGNPILSTSIKDEDDIIEYTTDPELIHEKY 164
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYP-KIIRQGKG 215
+ +D V+DGG STVVD T K++R+GKG
Sbjct: 165 -QDLVDAVIDGGYGGNIASTVVDCTNDLEYKVVREGKG 201
>gi|85712441|ref|ZP_01043490.1| Possible translation factor, Sua5/YciO/YrdC/YwlC family protein
[Idiomarina baltica OS145]
gi|85693719|gb|EAQ31668.1| Possible translation factor, Sua5/YciO/YrdC/YwlC family protein
[Idiomarina baltica OS145]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P ++ V+++++G + V PTD+ YAI C + A++R+ +I++++
Sbjct: 4 YFEVHPMNPQKRLIQQAVDIIRQGGIVVYPTDSGYAIGCQIGDKKAVDRICQIRDIDKEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D + FR +K+ PGPYTFIL +KEVPK+ +
Sbjct: 64 NFTLMCRDLSELSTYA----RVDN----DAFRLLKNNTPGPYTFILKGTKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGP 180
RK +G+R+P + I A+L++++ PL+STS+ L +NE DP I +
Sbjct: 114 ------PKRKTIGIRVPTNRIALALLEELNEPLMSTSL-ILGNNELAESDPETIREQL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +VDGG + EP+TVVD++ P +IR G G
Sbjct: 166 KRVDLIVDGGHKGEEPTTVVDLSEGAPVVIRGGSG 200
>gi|407714036|ref|YP_006834601.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Burkholderia
phenoliruptrix BR3459a]
gi|407236220|gb|AFT86419.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Burkholderia
phenoliruptrix BR3459a]
Length = 211
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 17/225 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++ +G V +PTD+ YA+ C L +A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIINDGGVVALPTDSSYALACHLDDKNAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL ++ PL+ +++ + + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILGELGQPLLGSTLILPGETTPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
LD V+DGG V EPSTV+D+TG P ++R G+G + EE A
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGDEPVLVRAGRGSLAPFGLEETA 211
>gi|86609790|ref|YP_478552.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558332|gb|ABD03289.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 237
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 36/234 (15%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + + + L+EGAV + PTDT+YAI CD A+ER+RRIK + K
Sbjct: 4 YFKLHPQQPQARSIRRIAAALREGAVMLYPTDTVYAIGCDATHKQAVERVRRIKQLSNDK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL I Y Q + +R ++ +PGP+TF+L A+K VPK +
Sbjct: 64 PLTFLCPSLSRIAHY--------AQVTDSAYRLMRRLIPGPFTFLLPATKLVPKLVME-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN------------EWMV 169
RK G+R+P+ AICQA+L+++ P++STS K D EW
Sbjct: 114 ------PKRKTTGIRVPDSAICQALLEELGNPIVSTSAKLGGDPVGSLDLSSGQAWEWES 167
Query: 170 DPVVIADTYGPEGL-------DFVVDGGV-RVAEPSTVVDMTGTYPKIIRQGKG 215
DP + E + D V+D R A+ STV+D+TG+ P ++R G G
Sbjct: 168 DPWDEGGIFAAEEMRQLEKQVDLVLDDDAPRRAKVSTVIDLTGSEPLVVRAGLG 221
>gi|358448829|ref|ZP_09159324.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter manganoxydans
MnI7-9]
gi|385330929|ref|YP_005884880.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter adhaerens HP15]
gi|311694079|gb|ADP96952.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter adhaerens HP15]
gi|357226979|gb|EHJ05449.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter manganoxydans
MnI7-9]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + V++L+ G V V PTD+ YAI C L A +R++RI+ ++
Sbjct: 4 FFQIHPETPQKRLINQAVDILRRGGVIVYPTDSAYAIGCHLGDKQAADRIKRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L DI Y + +R +K+ PGPYTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSDIGVY--------AKVDNTQYRLLKNFTPGPYTFILDATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ VGVR+P++AI Q +L ++ P++S+++ + + M DP I +T E
Sbjct: 113 -----HPKRRSVGVRVPDNAIVQELLGELGEPIMSSTLILPGETDPMTDPYEIRETLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG E +TVVD TG P + R GKG
Sbjct: 168 -LDLIIDGGFCGMEATTVVDFTGEAPVVTRVGKG 200
>gi|411117135|ref|ZP_11389622.1| translation factor SUA5 [Oscillatoriales cyanobacterium JSC-12]
gi|410713238|gb|EKQ70739.1| translation factor SUA5 [Oscillatoriales cyanobacterium JSC-12]
Length = 220
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 29/208 (13%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYT 77
+V +L++GAV + PTDT+YAI CDL S S I+R+R+IK + KPL+ LC SL +I +Y
Sbjct: 20 IVAMLRDGAVVLYPTDTIYAIGCDLNSKSGIQRVRQIKQLSNDKPLTFLCSSLSNIASYA 79
Query: 78 TGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRI 137
+R ++H +PGPYTF+L A+K VPK + R+ G+R+
Sbjct: 80 V--------VSDTAYRIMRHLIPGPYTFLLPATKLVPKLVMN--------PKRRTTGIRV 123
Query: 138 PNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPV------VIADTYGPEGLDFVVDGGV 191
PN A+CQAIL ++ P+ISTS D + V + + + +D +VD G
Sbjct: 124 PNHAVCQAILNTLENPIISTSAHVFDDGMPLTPKVPEHPSRIELFDFLDKTVDVIVDNG- 182
Query: 192 RVAEP----STVVDMTGTYPKIIRQGKG 215
EP ST++D+T P ++R+G G
Sbjct: 183 --EEPGYQMSTILDLTDEEPIVVRRGLG 208
>gi|218438456|ref|YP_002376785.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7424]
gi|218171184|gb|ACK69917.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7424]
Length = 217
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 118/215 (54%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +E + + LK GA+ + PTDT+YAI CD+ + SA+ER+R++K + KPL+ L
Sbjct: 9 PKTPQQRSIEQISDALKSGAIMLYPTDTVYAIGCDMNTKSAVERVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y + +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYALVTDQA--------YRIMKRLIPGPYTFLLPATKLVPKLVMSPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE-----WMVDPVVIADTYGPE 181
RK G+R+P++ +CQA+L +D P+IS S L D E V+ + D +
Sbjct: 116 ---RKTTGIRVPDNEVCQALLTSLDNPIISASAH-LPDEEGDFPTMGVEKARLFDALD-K 170
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D GV E ST++D+T P I+RQG G
Sbjct: 171 LVDIIIDSGVEPGFEVSTIIDLTDNEPIIVRQGLG 205
>gi|375107055|ref|ZP_09753316.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderiales bacterium
JOSHI_001]
gi|374667786|gb|EHR72571.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderiales bacterium
JOSHI_001]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L +L +G V VPTD+ YA+VC L A+ +RRI+ V+
Sbjct: 4 YFEVHPENPQPRLLAQAARILHDGGVAAVPTDSSYALVCHLDDKDAVAAMRRIRQVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L D+ Y R D + +R ++ PGP+TFIL A+KEVP++
Sbjct: 64 LLTLLCRDLSDLANYA----RVDNRQ----YRLLRQATPGPFTFILEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ + QA+L++M PL++T++ + E + D I + + +
Sbjct: 112 ----SHPSRRTIGLRVPDHKVTQALLEQMGQPLLATTLIPPGETEALNDAQDIRERF-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L VVD G + +TVVD++G P ++RQG+G
Sbjct: 167 MLQAVVDAGACPMQATTVVDLSGDEPVLVRQGRG 200
>gi|399925823|ref|ZP_10783181.1| translation factor [Myroides injenensis M09-0166]
Length = 206
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 129/218 (59%), Gaps = 22/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + +L+ VV++L++G + + PTDT+Y + CD+ + A+ER+ +IK V+
Sbjct: 3 QFIKIYPENPNEKELDKVVKILRDGGLVIYPTDTVYGLGCDITNSKALERIAKIKGVKLD 62
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L +I Y Q + F+ +K LPGPYTFIL + ++PK
Sbjct: 63 KANFSFICYDLSNISDYVK-------QIDTSTFKILKKALPGPYTFILPGNNDLPK---- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
++ +K VG+R+P++ I + I++++ P++STS+ + +D E+ DP +I +
Sbjct: 112 ------EFKKKKTVGIRVPDNNIAREIVKRLGNPIVSTSI-YDEDEVLEYTTDPELIYEK 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG + STV+D++G P++IR+GKG
Sbjct: 165 W-QNTVDAVIDGGYGDNQASTVIDLSGLEPEVIREGKG 201
>gi|390947926|ref|YP_006411686.1| translation factor SUA5 [Alistipes finegoldii DSM 17242]
gi|390424495|gb|AFL79001.1| translation factor SUA5 [Alistipes finegoldii DSM 17242]
Length = 200
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 27/215 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +PS +L VV+ L++G + + PTD++YA C L+S AIERLRR+K + ++
Sbjct: 7 EQNPS---ERELRKVVDALEDGGIIIYPTDSVYAFGCSLRSPKAIERLRRMKGKD-AEAF 62
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+++ +L Y R D FR +K LPGP+TF+LTAS +P K +
Sbjct: 63 TVVFENLAQAAEYC----RVDNAA----FRILKRNLPGPFTFVLTASSGMPDKALEK--- 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGP 180
R+ +G+RIP +A+ +AI+ + PLI+TSVK D+ E+ DP +I + YG
Sbjct: 112 ------RRTIGIRIPGNAVPRAIVAALGCPLITTSVK--DDDEVVEYTTDPELIHERYGR 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + V+DGGV P+TVVD+TG P+I+R+GKG
Sbjct: 164 D-VALVIDGGVGDNVPTTVVDLTGDEPEILREGKG 197
>gi|117619033|ref|YP_857424.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560440|gb|ABK37388.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 229
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++++ G V V PTD+ YA+ C + A+ER+ RI+ ++P+ +++
Sbjct: 32 PENPQARLISQAVQIIQNGGVIVYPTDSGYALGCQMGDKGALERICRIRRIDPNHDFTLV 91
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + FR +K+ PGPYTFI A+KEVP++ +
Sbjct: 92 CRDLSEISTY--------AKVDNTAFRLIKNNTPGPYTFIFKATKEVPRRLMN------- 136
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+P++ I QA+L+ + PL+ST++ + + DP I D G + LD V
Sbjct: 137 -EKKKTIGIRVPDNKIAQALLEALGEPLLSTTLILPESDMAEFDPEEIFDKLGKQ-LDLV 194
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+GG +P+TVVD + P + R+G G
Sbjct: 195 VNGGYLGEQPTTVVDFSDDEPVLRRRGAG 223
>gi|254481766|ref|ZP_05095009.1| Sua5/YciO/YrdC/YwlC family protein [marine gamma proteobacterium
HTCC2148]
gi|214037895|gb|EEB78559.1| Sua5/YciO/YrdC/YwlC family protein [marine gamma proteobacterium
HTCC2148]
Length = 207
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + V++++ G V V PTD+ YAI C + +A++R+RRI+ +
Sbjct: 4 FFQIHPDNPQARLVRQAVDIIRAGGVVVYPTDSAYAIGCHIGDKNALDRIRRIRKLADRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY+ R D +R +K C PGPYTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSEIATYS----RVDNAD----YRMLKACTPGPYTFILKATSEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK VG+R+P++ I QA+L + P++S ++ D ++DP I +T +
Sbjct: 113 -----HAKRKTVGLRVPDNNITQALLTDLGEPMMSVTLIMPGDEYPLIDPYDIRETLQHD 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E +TVVD+ P ++R GKG
Sbjct: 168 -VDLVIDGGYCGMEATTVVDLVDETPLVLRAGKG 200
>gi|387131204|ref|YP_006294094.1| YciO family [Methylophaga sp. JAM7]
gi|386272493|gb|AFJ03407.1| YciO family [Methylophaga sp. JAM7]
Length = 208
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ E+++ G + V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQACEMIRRGGLVVYPTDSGYAVGCHIGDKTAMERIRRLRQLDADH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + + +FR +K PGPYTFIL A+KEVP++
Sbjct: 64 NFTLVCRDLSELSVY--------ARVNNAVFRLIKAHTPGPYTFILPATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+++ RK +G+RIP I A+L ++D PL+S+++ +++ M + I D G +
Sbjct: 112 ----QHAKRKTIGLRIPTHNIALALLAELDEPLMSSTLILPGESQVMTEADDIVDAIGKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG AEP+TVV T P++IR G+G
Sbjct: 168 -VELIIDGGACSAEPTTVVAFTEDMPEVIRVGQG 200
>gi|330817634|ref|YP_004361339.1| Sua5/YciO/YrdC/YwlC [Burkholderia gladioli BSR3]
gi|327370027|gb|AEA61383.1| Sua5/YciO/YrdC/YwlC [Burkholderia gladioli BSR3]
Length = 211
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + VE++K+G V +PTD+ YA+ C L +A+ER+R+I+ ++ +
Sbjct: 4 YFRIHPENPQPRLVRQAVEIVKQGGVIAMPTDSSYALACHLDDKTAVERVRKIRGLDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + + +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANF--------AMVDNHQYRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D++ + DP I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAVLETLGQPLLGTTLILPPDSDPLNDPEEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPST+VD+TG P ++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTIVDLTGDAPVLVRAGRG 200
>gi|187924529|ref|YP_001896171.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phytofirmans PsJN]
gi|187715723|gb|ACD16947.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phytofirmans PsJN]
Length = 211
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++ +G V +PTD+ YA+ C L A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIINDGGVVALPTDSSYALACHLDDKDAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ +++ + + + DP I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILEELGQPLLGSTLIMPGETQPLNDPEEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G V EPSTV+D+TG P ++R G+G
Sbjct: 168 -LDLVIDSGPCVCEPSTVIDLTGAEPVLVRPGRG 200
>gi|299067192|emb|CBJ38388.1| conserved protein of unknown function, translation factor domain
(SUA5) [Ralstonia solanacearum CMR15]
Length = 207
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + VE+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAVEIIRAGGLIALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +RAVK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNRQ----YRAVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I A++ ++ PL+S +++ D + + I +
Sbjct: 112 ----SHPSRKTIGLRVPDHPIPLALMAELGEPLLSATLQLPGDEAPLNEADAIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRRGRG 200
>gi|332531465|ref|ZP_08407369.1| sua5/ycio/yrdc/ywlc family protein [Hylemonella gracilis ATCC
19624]
gi|332039134|gb|EGI75556.1| sua5/ycio/yrdc/ywlc family protein [Hylemonella gracilis ATCC
19624]
Length = 207
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P L+ V LL G V VPTD+ YA+VC L +A ERLR I+ ++
Sbjct: 4 FFELHPDNPQQRLLKQAVALLASGQVLAVPTDSCYALVCHLDDKAAAERLRAIRRIDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGP+ FIL ASKEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNRQ----YRLLKAATPGPWAFILEASKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ + Q +L APL++T++ + E + D I Y
Sbjct: 112 ----SHPARKTIGLRVPDHKVLQELLALHGAPLLATTLIPAGETEPLNDAEEIRSRYQ-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L V+D G EP+TV+D+TG P+IIR+G+G
Sbjct: 167 DLAAVIDAGACPLEPTTVIDLTGDEPEIIRRGRG 200
>gi|326800728|ref|YP_004318547.1| Sua5/YciO/YrdC/YwlC family protein [Sphingobacterium sp. 21]
gi|326551492|gb|ADZ79877.1| Sua5/YciO/YrdC/YwlC family protein [Sphingobacterium sp. 21]
Length = 235
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 19/217 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + +E VV +LK+G + + PTDT+Y I CD+ + AIE L RI+ ++P
Sbjct: 30 MLIRIYPENPNERAIEQVVAVLKKGGIIIYPTDTVYGIGCDITNQKAIETLCRIRGIKPE 89
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L DI YT FR +K LPGP+T+I AS +VPK
Sbjct: 90 KANLSFICYDLTDIAQYTKPIDTA-------TFRLLKKSLPGPFTYIFNASNQVPK---- 138
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
S +K VG+R+P++ I + I++++ P++S S+ + E+ DP +I + +
Sbjct: 139 -----LMSSNKKTVGIRVPDNNIAREIVRQLGNPIVSASIHDEDEILEYSTDPELIHEKF 193
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E STVVD T +IRQGKG
Sbjct: 194 -QNLVDLVIDGGYGGNEASTVVDCTSGEFDVIRQGKG 229
>gi|395007426|ref|ZP_10391170.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. CF316]
gi|394314573|gb|EJE51460.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. CF316]
Length = 211
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 122/219 (55%), Gaps = 21/219 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P L+ LL++G + VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 3 QYFEVHPDNPQPRLLKQAATLLQKGGIVAVPTDSSYALVCHLDDKDAVDRLRRIRQVDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +L+ APL++T++ + E + DP I + Y
Sbjct: 112 -----SHPSRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPAGETEPLNDPEEIRERY-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+ +D +VD G EP+TVVD+ TG P+++R+G+G
Sbjct: 166 KLVDAIVDAGACPREPTTVVDLTPMGTGGDPEVVREGRG 204
>gi|333376046|ref|ZP_08467840.1| Sua5/YciO/YrdC/YwlC family protein [Kingella kingae ATCC 23330]
gi|332969027|gb|EGK08067.1| Sua5/YciO/YrdC/YwlC family protein [Kingella kingae ATCC 23330]
Length = 206
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 20/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ E++++G V V+PTD+ YA+VC L +A+ER+ I+ ++ L++L
Sbjct: 9 PDNPQERLIKQACEIVRQGGVAVLPTDSCYALVCQLGDKTAMERILSIRKIDLKHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY + + FR +K PG YTFIL ASKEVP + +
Sbjct: 69 CADLSELGTY--------AKVDNSQFRQLKMTTPGAYTFILPASKEVPNRTL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P++AI A+L+++ PL+S ++ +D+E + DP I + +D V
Sbjct: 113 HPKRKTIGLRVPDNAIALALLRELGEPLLSCTLMLPEDDEPLSDPYEIRERL-EHSVDLV 171
Query: 187 VDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+DGG EP+TV+DMT GT +++RQGKG
Sbjct: 172 IDGGWCGTEPTTVIDMTDGT--ELVRQGKG 199
>gi|85859579|ref|YP_461781.1| Sua5/YciO/YrdC/YwlC family protein [Syntrophus aciditrophicus SB]
gi|85722670|gb|ABC77613.1| Sua5/YciO/YrdC/YwlC family protein [Syntrophus aciditrophicus SB]
Length = 202
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + + + ++ V E+L++G + + PTDT+Y + C+L + IE++ IK
Sbjct: 1 MLLSINTQNPQTRLIKKVAEILRDGGIVIYPTDTVYGLGCNLFNKKGIEKIYEIKKRNKK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS +C L+DI Y G +R +K LPGPYTFIL AS+ VPK +
Sbjct: 61 QPLSFICADLKDISKYAQVTDFG--------YRIMKRHLPGPYTFILQASRLVPKIILPK 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
TT G+R+P++ IC A++ ++ P+ISTSVK D+ ++ DP I +
Sbjct: 113 RQTT---------GIRVPDNRICMALVAELGQPIISTSVKA-ADDRYLNDPEEIESIF-K 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG+ AEPST+V + +++R GKG
Sbjct: 162 HHVDVIINGGIIAAEPSTIVSLIDDTVEVLRIGKG 196
>gi|186476189|ref|YP_001857659.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phymatum STM815]
gi|184192648|gb|ACC70613.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phymatum STM815]
Length = 230
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 123/225 (54%), Gaps = 17/225 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ ++++ G V +PTD+ YA+ C L + +A++R+RRI+ ++ +
Sbjct: 23 YFRLHPDNPQPRLIKQAAQIIESGGVVALPTDSSYALACQLDNRNAVDRVRRIRGIDERQ 82
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 83 LLSLLVRDLSELANFALVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 130
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ +++ + + + DP I + +
Sbjct: 131 ----SHPSRKTIGLRVPDHAITLAILEELGQPLLGSTLILPGETQPLNDPAEIRERLEKQ 186
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
LD V+DGG EPSTV+D+TG P ++R G+G + EE A
Sbjct: 187 -LDLVIDGGACPCEPSTVIDLTGEEPVLVRPGRGSLAPFGLEETA 230
>gi|354604293|ref|ZP_09022284.1| Sua5/YciO/YrdC/YwlC family protein [Alistipes indistinctus YIT
12060]
gi|353348060|gb|EHB92334.1| Sua5/YciO/YrdC/YwlC family protein [Alistipes indistinctus YIT
12060]
Length = 200
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + + VV++L+ V V PTD++YA C L S AIER+R + +
Sbjct: 1 MLIRIYPENPNEKAIAQVVDILRRDGVIVYPTDSVYAFGCSLHSTRAIERIRTLTGKQ-G 59
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
SI+C L I Y + F+ +K LPGP+TF+L+AS +VP K +
Sbjct: 60 DDFSIICHDLSGIAAY--------ARVDTPTFKLMKRNLPGPFTFLLSASNKVPDKFL-- 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLK-DNEWMVDPVVIADTYG 179
+K VGVRIP + I AI++ + PL++ SVK + E+ DP +I + YG
Sbjct: 110 -------DRKKTVGVRIPANGIPLAIVEALGNPLVTASVKTPGPETEYTTDPSLIYERYG 162
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D VVDGG AEPST+VD TG P+IIR+G G
Sbjct: 163 -DRVDMVVDGGYGNAEPSTIVDCTGDEPEIIREGIG 197
>gi|334703904|ref|ZP_08519770.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas caviae Ae398]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L+ G V V PTD+ YA+ C + + A+ER+ RI+ +EP+ +++CR L +I TY
Sbjct: 21 VQILQNGGVIVYPTDSGYALGCQMGNKDALERICRIRRIEPNHDFTLVCRDLSEISTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR VK+ PGPYTFI A+KEVP++ + +K +G+R+P
Sbjct: 79 ------AKVDNTAFRLVKNNTPGPYTFIFKATKEVPRRLMN--------EKKKTIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ I A+L+ + PL+ST++ DP IAD G + LD VV+GG +P+T
Sbjct: 125 ANNIALALLEALGEPLLSTTLILPGSEMAEFDPEEIADKLGKQ-LDLVVNGGYLGEQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
VVD + P + R+G G
Sbjct: 184 VVDFSDDEPVLRRRGAG 200
>gi|390949547|ref|YP_006413306.1| Sua5/YciO/YrdC/YwlC family protein [Thiocystis violascens DSM 198]
gi|390426116|gb|AFL73181.1| Sua5/YciO/YrdC/YwlC family protein [Thiocystis violascens DSM 198]
Length = 207
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 127/221 (57%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + VE+L EG V V PTD+ YA+ C + SA+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLVRRAVEILLEGGVVVYPTDSSYALGCQIGEKSAMERIRRLRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D Q FR +K PGPYTFI A+K+VP++ +
Sbjct: 64 NFTLVCRDLSEITTYA----RIDNQA----FRLLKTLTPGPYTFIHEATKQVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ IC+A+L +++ P++ST++ D++ + DP + + +
Sbjct: 113 -----HPKRKAIGIRVPDHEICRALLTELNQPILSTTLILPDDDQPLTDPYEMRELLD-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D V+DGG EP+TVVDMT P ++R GKG + E
Sbjct: 167 HVDLVIDGGFCGLEPTTVVDMTADPPALVRLGKGDATLFEE 207
>gi|434394739|ref|YP_007129686.1| translation factor SUA5 [Gloeocapsa sp. PCC 7428]
gi|428266580|gb|AFZ32526.1| translation factor SUA5 [Gloeocapsa sp. PCC 7428]
Length = 217
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 26/210 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+E ++ L++GAV + PTDT+YAI CDL S SA++R+R+IK + KPL+ LC SL ++
Sbjct: 17 VEQIISTLRDGAVMLYPTDTVYAIGCDLNSKSAVQRVRQIKQLSNDKPLTFLCPSLSNVA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY + +R ++H +PGPYTF+L A+K VP+ ++ RK G
Sbjct: 77 TY--------ARVSDTAYRIMRHLIPGPYTFLLPATKLVPR--------LVQHPKRKTTG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKD--------NEWMVDPVVIADTYGPEGLDFV 186
+R+P+ A+ QA+L ++ P+ISTS +D +E + V + D + +D +
Sbjct: 121 IRVPDHAVSQALLNALENPIISTSAHLPQDENGHSSSQSEANISKVELFDRLD-KLVDVI 179
Query: 187 VDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
VD G + + ST++D T P I R+G G
Sbjct: 180 VDDGSELGYQVSTILDFTENEPAIARKGLG 209
>gi|333383445|ref|ZP_08475105.1| Sua5/YciO/YrdC/YwlC family protein [Dysgonomonas gadei ATCC
BAA-286]
gi|332827684|gb|EGK00423.1| Sua5/YciO/YrdC/YwlC family protein [Dysgonomonas gadei ATCC
BAA-286]
Length = 202
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 25/219 (11%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ + +++ ++++L++G + V PTDT+YAI CD + A+E++ R+K++ P
Sbjct: 1 MLVKLYEENPNPKEIDKIIKVLQDGGLIVYPTDTVYAIGCDALNVRAVEKICRMKDINPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L +I Y R D N F+ +K LPGP+TFIL + +PK
Sbjct: 61 KSNLSIICYDLSNISEYA----RVDN----NTFKLMKKNLPGPFTFILNTTSSLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
Y +K VG+RIP++ I + ++ + P+++TSVK D+ E+ DP +I +
Sbjct: 109 ------IYKNKKTVGIRIPDNNIIRELVHTLGNPIMTTSVK--DDDEVIEYTTDPELIYE 160
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y + +D V+DGG E ST+VD TG P+I+RQGKG
Sbjct: 161 RY-QDLVDIVIDGGYGGIEASTIVDCTGDEPEIMRQGKG 198
>gi|300723350|ref|YP_003712653.1| protein yciO [Xenorhabdus nematophila ATCC 19061]
gi|297629870|emb|CBJ90488.1| Protein yciO [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +E E+LK+G V + PTD+ YAI C L++ A+ R+ RI+ +E +++
Sbjct: 9 PDNPQARLIEQSAEVLKKGGVVIYPTDSGYAIGCCLENKDAMTRICRIRQLEGRHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY D Q FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSEISTYA----HVDNQA----FRLIKNNTPGNYTFILQATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L+KM PL+S S+ ++ DP I +T G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPIALELLEKMGEPLMSCSLILPGNDFAESDPEEIKETLGKQ-VDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG + +TVVD+TG P I+R+G+G
Sbjct: 172 IHGGYLGQQSTTVVDLTGDSPVILREGEG 200
>gi|402566114|ref|YP_006615459.1| Sua5/YciO/YrdC/YwlC [Burkholderia cepacia GG4]
gi|402247311|gb|AFQ47765.1| Sua5/YciO/YrdC/YwlC [Burkholderia cepacia GG4]
Length = 210
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ V+++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVDIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPEHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|429750076|ref|ZP_19283141.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429166003|gb|EKY08019.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 207
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 125/205 (60%), Gaps = 22/205 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++ +VE+L++G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C SL++
Sbjct: 16 EIAKIVEVLRDGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSSLKN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q ++ F+ +K LPGPYTFI+ + +PK + +K
Sbjct: 76 LSDYVK-------QIDSSTFKLLKRALPGPYTFIMQGNNNLPK----------DFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGG 190
VG+R+P++AI Q I++++ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 119 VGIRVPDNAIAQLIVERLGNPIVSTSI-YDEDDVIEYTTDPELIYEKWQNK-VDIVIDGG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P ++R+GKG
Sbjct: 177 YGDNVASTVIDLSGDVPVVVREGKG 201
>gi|339325292|ref|YP_004684985.1| translation factor Sua [Cupriavidus necator N-1]
gi|338165449|gb|AEI76504.1| translation factor Sua [Cupriavidus necator N-1]
Length = 207
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P S ++ ++L++G + +PTD+ YA+ C L A+ERLRR++ ++
Sbjct: 4 YFEIHPLNPQSRLVKQAAQILQKGGLIALPTDSSYALACRLDDKGAVERLRRLRGIDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCRDLSELGN----FARVDNRQ----YRWLKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P AI A+L + PLIS +++ D + DP I +
Sbjct: 112 ----SHPARKTIGVRVPEHAIPLALLGETGEPLISATLQMPGDEAPLNDPAEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VV GG A+P+TV+D+T P++IR G+G
Sbjct: 168 -LDLVVCGGPAPAQPTTVIDLTSGEPELIRAGRG 200
>gi|73540803|ref|YP_295323.1| Sua5/YciO/YrdC/YwlC [Ralstonia eutropha JMP134]
gi|72118216|gb|AAZ60479.1| Sua5/YciO/YrdC/YwlC [Ralstonia eutropha JMP134]
Length = 207
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P ++ V+++++G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 YFEIHPQNPQPRLIKQAVQIIRQGGLIALPTDSSYALGCQLDDKAAVERLRRLRGIDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ + F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCSDLSELGS----FARVDNRQ----YRWIKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P AI A+L PL++ +++ D E M DP I +
Sbjct: 112 ----SHPSRKTIGVRVPEHAIPLALLADAGEPLLTATLQLPGDEEPMNDPAEIRARL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+ GG A+P+TV+D+T P+++RQG+G
Sbjct: 167 LLDLVICGGPAPAQPTTVIDLTSGEPELVRQGRG 200
>gi|383189934|ref|YP_005200062.1| Sua5/YciO/YrdC/YwlC family protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371588192|gb|AEX51922.1| Sua5/YciO/YrdC/YwlC family protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 206
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 21/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + VELL++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +
Sbjct: 4 YFYIHPENPQPRLINQAVELLRKGQVIVYPTDSGYALGCRLEEKNAMERICRIRQLDSNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVR 119
+++CR L ++ TY H + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLVCRDLSELSTY----------AHVDNAAFRLMKNNTPGNYTFILKATKEVPRRLMS 113
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
RK +G+R+P++ I A+L+ + PL+ST++ ++ DP I D G
Sbjct: 114 --------EKRKTIGLRVPSNPIAIALLEALGEPLMSTTLMLPGNDFAESDPEDIKDHLG 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG +P+TVVD+T P+++R+G G
Sbjct: 166 -KVVDLVIDGGSLGQQPTTVVDLTEAAPEVVREGAG 200
>gi|409099629|ref|ZP_11219653.1| Sua5/YciO/YrdC/YwlC family protein [Pedobacter agri PB92]
Length = 206
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 123/220 (55%), Gaps = 25/220 (11%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + +E VVE+LK+G + + PTDT+Y + CD+ + AIE++ RI+ ++P
Sbjct: 1 MLIKIYPENPNEKAIEQVVEVLKKGGLIIYPTDTIYGLGCDITNPKAIEKIARIRGIKPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L+ I Y FR +K LPGP+TFI A+ VPK
Sbjct: 61 KANFSFICHDLKHISDYIKPIDN-------TTFRVLKKALPGPFTFIFNANNNVPKLL-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
S +K VG+R+P++ I + I++++ P++STS+K D+ E+ DP +I +
Sbjct: 112 -------SSNKKTVGIRVPDNNIARCIVKELGNPILSTSIK--DDDELIEYSTDPELIHE 162
Query: 177 TYGPEGL-DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y E L D V+DGG + STV+D T ++IR+GKG
Sbjct: 163 KY--ENLVDLVIDGGYGDNDASTVIDCTNGEFEVIREGKG 200
>gi|17545860|ref|NP_519262.1| hypothetical protein RSc1141 [Ralstonia solanacearum GMI1000]
gi|17428154|emb|CAD14843.1| putative rna-binding protein, yrdc [Ralstonia solanacearum GMI1000]
Length = 207
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + VE+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAVEIIRAGGLIALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +RAVK PGP+ F+L A++EVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNRQ----YRAVKAATPGPFVFLLEATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I A++ ++ PL+S +++ D + + I +
Sbjct: 112 ----SHPSRKTIGLRVPDHPIPLALMAELGEPLLSATLQLPGDEAPLNEADAIRALLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRRGRG 200
>gi|407892688|ref|ZP_11151718.1| translation factor [Diplorickettsia massiliensis 20B]
Length = 207
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 16/209 (7%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P L V + L +GA+ V PTD+ YA+ C L + I+RLR+I+ + PL+++
Sbjct: 9 PRNPQLHLLRQVAQQLMKGALAVYPTDSAYALGCQLTNKEGIQRLRQIRQLNSKHPLTVV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y Q + FR +K PGPYTF+L A+K++PK A+
Sbjct: 69 CRDIAEVAHY--------AQLDDSTFRLLKAYTPGPYTFLLPATKQIPKYL-------AQ 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ +K +G+RIP+ I +L+ ++ PL+++++ +++P I D G +D +
Sbjct: 114 MNQKKVIGIRIPDHIILHDLLEMLEVPLVTSTLILPGAELPLLEPEAIHDMLG-RRVDLI 172
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG + +T++D+ YPKIIR+GKG
Sbjct: 173 IDGGSSGLDLTTIIDLVEGYPKIIREGKG 201
>gi|170699294|ref|ZP_02890343.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria
IOP40-10]
gi|170135786|gb|EDT04065.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria
IOP40-10]
Length = 210
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ P ++ +++ +G V +PTD+ YA+ C L A+ER+RRI+ ++
Sbjct: 3 QFFRIHPDNPQPRLIKQAADIVSKGGVIAIPTDSSYALACHLDDKDAVERVRRIRGLDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+ LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 63 QHLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I
Sbjct: 112 -----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEK 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 167 Q-VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|392954950|ref|ZP_10320501.1| SUA5/YciO/YrdC/YwlC family protein [Hydrocarboniphaga effusa AP103]
gi|391857607|gb|EIT68138.1| SUA5/YciO/YrdC/YwlC family protein [Hydrocarboniphaga effusa AP103]
Length = 208
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++E P S L L++GAV PTD+ YA+ C L A ERLRRI+ + +
Sbjct: 4 WIEVHPQNPQSRLLAQAAVHLRQGAVIAYPTDSCYALGCHLDDKDAAERLRRIRRFDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D FR ++ PGPYTF+LTA+KE+P++
Sbjct: 64 QFTLMCRDLSEIATYA----RVDNWQ----FRLLRQLTPGPYTFVLTATKELPRRVA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP + Q +L + PLIS ++++ + + DP + E
Sbjct: 113 -----HEKRKTIGIRIPEHPVTQGLLATLGEPLISCTLQFPGEELPVNDPREFEERLLRE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+D G EP+TVVD++ +++RQGKGP
Sbjct: 168 -VDVVLDSGNCGLEPTTVVDLSEGEARVLRQGKGP 201
>gi|197122573|ref|YP_002134524.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter sp. K]
gi|220917357|ref|YP_002492661.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|196172422|gb|ACG73395.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter sp. K]
gi|219955211|gb|ACL65595.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 19/213 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
VE DP +E V L G V PTDT Y I CDL AIER+ ++K + +
Sbjct: 7 VEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQLPRTHE 66
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ +C+ L +I Y +R ++ +PGP+TFIL A++ VP+ +R
Sbjct: 67 LAFICQDLAEISRYAI--------VDNAAYRVLRRKVPGPFTFILPATRLVPELVLRR-- 116
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+K VG+RIP+ I +++++ PLISTS + E ++D I D G G
Sbjct: 117 -------QKTVGIRIPDSPIALELVRRLGHPLISTSAAK-PEGEILIDAHDIKDELG-HG 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG R AEPS+V+D++G P ++R GKG
Sbjct: 168 LDLILDGGFRPAEPSSVIDLSGPEPVVVRAGKG 200
>gi|345872384|ref|ZP_08824319.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodococcus drewsii AZ1]
gi|343918932|gb|EGV29689.1| Sua5/YciO/YrdC/YwlC family protein [Thiorhodococcus drewsii AZ1]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE+L EG V V PTD+ YA+ C + SA+ER+RRI+ V+
Sbjct: 4 FFQIHPENPQPRLIRRAVEILLEGGVIVYPTDSSYALGCQIGEKSAMERIRRIRRVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + D Q FR +K PGPYTFI A+K+VP++
Sbjct: 64 YFTLVCRDLSEITTYA----KVDNQA----FRLLKTLTPGPYTFIHEATKQVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++ IC+A+L ++D P++ST++ D M DP + + +
Sbjct: 112 ----QHPKRKAIGLRVPDNPICRALLSELDQPILSTTLILPDDELPMTDPYDMREILD-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG EP+TV+DM P +IR+GKG
Sbjct: 167 HLELVIDGGFCGLEPTTVIDMISDPPALIRRGKG 200
>gi|238020912|ref|ZP_04601338.1| hypothetical protein GCWU000324_00809 [Kingella oralis ATCC 51147]
gi|237867892|gb|EEP68898.1| hypothetical protein GCWU000324_00809 [Kingella oralis ATCC 51147]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 18/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++++G V V PTD+ YAI C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPENPQERLIKQAVEIVRKGGVIVYPTDSCYAIGCALGDKTAMERILAIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L D+ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSDLGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ P++S+++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNAIALALLKELGEPMLSSTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT +++RQGKG
Sbjct: 167 AVDLVIDGGWCGTEPTTVIDMTDGV-ELVRQGKG 199
>gi|333029883|ref|ZP_08457944.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides coprosuis DSM
18011]
gi|332740480|gb|EGJ70962.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides coprosuis DSM
18011]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ S D K++ V+++L +G + + PTDT+YAI C AIE++ IK ++P
Sbjct: 1 MLMKLYDSNNDPQKIQQVIDILNDGGIIIYPTDTMYAIGCHCMKERAIEQICEIKGIDPR 60
Query: 61 K-PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS++C L I Y + +F+ +K LPGP+TFIL + ++PK
Sbjct: 61 KNNLSLICYDLSTISEY--------AKMSNTVFKIMKANLPGPFTFILNGTNKLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---WMVDPVVIAD 176
+ RK VG+R+PN+ I I + ++ P+++T+V L +NE ++ +P +I +
Sbjct: 109 ------IFRNRKEVGIRMPNNEIIMDITKALEFPIMTTTVP-LGENEDTGFLTNPELIYE 161
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+G + +D V+DGG ST+VD TG Y +I RQGKG
Sbjct: 162 KFG-KIVDLVIDGGTGDYSASTIVDCTGDYVEIARQGKG 199
>gi|334121012|ref|ZP_08495088.1| Sua5/YciO/YrdC/YwlC family protein [Microcoleus vaginatus FGP-2]
gi|333455731|gb|EGK84374.1| Sua5/YciO/YrdC/YwlC family protein [Microcoleus vaginatus FGP-2]
Length = 221
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 126/235 (53%), Gaps = 32/235 (13%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++E + + LK+GAV + PTDT+YAI CD+ S SA+ER+R+IK + KPL
Sbjct: 6 EVHPVAPQRDRIEKITKALKDGAVMLYPTDTVYAIGCDINSKSAVERVRQIKQLSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PGPYTF+L A+K VP+ +
Sbjct: 66 TFLCSSLSNITDY--------AAVSDEAYRIIKRLIPGPYTFLLPATKLVPRLVMN---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVD-PVVIADTYGPEG 182
RK G+R+P+ +C +L+ + P+ISTS D+E P A+++G
Sbjct: 114 ----PKRKTTGIRVPDQRLCFTLLEALGNPIISTSAHITTDDEGAAPVPASKAESFGKAE 169
Query: 183 L--------DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKGPKLYWMEEED 225
L D +VD G ++P ST++D+T + P ++R+G G + + E+D
Sbjct: 170 LFDCFSKLVDVIVDDG---SDPGYQVSTILDLTQSEPIVVRRGLGSEAVAVWEKD 221
>gi|292488388|ref|YP_003531270.1| hypothetical protein EAMY_1912 [Erwinia amylovora CFBP1430]
gi|428785330|ref|ZP_19002821.1| hypothetical protein EaACW_1923 [Erwinia amylovora ACW56400]
gi|291553817|emb|CBA20862.1| Uncharacterized protein yciO [Erwinia amylovora CFBP1430]
gi|426276892|gb|EKV54619.1| hypothetical protein EaACW_1923 [Erwinia amylovora ACW56400]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ VE+L +G+V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++CR L ++
Sbjct: 18 IKQAVEMLNKGSVIVYPTDSGYALGCKLEDKSAMERIWRIRQLDGNHNFTLMCRDLSELS 77
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY FR +K+ PG YTFIL A+KEVP++ + RK +G
Sbjct: 78 TY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS--------EKRKTIG 121
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D ++ GG
Sbjct: 122 LRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDEIG-KLVDLIIHGGFLGQ 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+P+TV+D+T P+++R+G G
Sbjct: 181 QPTTVIDLTENTPEVVREGVG 201
>gi|428221840|ref|YP_007106010.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7502]
gi|427995180|gb|AFY73875.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7502]
Length = 218
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 117/224 (52%), Gaps = 36/224 (16%)
Query: 6 DPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSI 65
+P + + +V L+ GAV + PTDT+YAI CDL S SA++R+R +K + KPL+
Sbjct: 8 NPETPQTRTVNQIVSELRSGAVMLYPTDTVYAIGCDLNSKSAVKRVRELKKISNDKPLTF 67
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
LC SL +I Y Q H +R ++ +PG YTFIL A+K VPK +
Sbjct: 68 LCPSLSNIAMY--------AQVHDVAYRLMRSLIPGAYTFILPATKLVPKLVMNPK---- 115
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL-- 183
RK G+R+P+ IC A+L+ + P+ISTS + E +D D P +
Sbjct: 116 ----RKTTGIRVPDSPICLALLESLGNPVISTSANLI---EVEMDKFESLDISNPSQIEL 168
Query: 184 --------DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
D +VD G+ EP ST++D+T PKIIRQG G
Sbjct: 169 FDHFSKLVDVIVDNGL---EPRYKVSTILDLTEVEPKIIRQGLG 209
>gi|427399228|ref|ZP_18890466.1| Sua5/YciO/YrdC/YwlC family protein [Massilia timonae CCUG 45783]
gi|425721719|gb|EKU84627.1| Sua5/YciO/YrdC/YwlC family protein [Massilia timonae CCUG 45783]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 124/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + ++ +++ G + +PTD+ YA+VC L +A+++LRRI+ V+
Sbjct: 4 YFQIHPENPQARLIKQAAQIVSSGGIVALPTDSAYALVCRLDDKTAVDKLRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++L R L ++ Y R D + +R +K +PGPYT IL A++E+P++
Sbjct: 64 HLTLLVRDLSEVAQYA----RVDN----SQYRLLKATMPGPYTVILEATRELPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + I A+L+++ PLI T+++ D+ + DP + + +
Sbjct: 112 ----SHPSRKTIGLRVPENRITLALLEELGEPLIGTTLQLPGDDHMLSDPEEVRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG + E +T++D+TG P+++R+G+G
Sbjct: 168 -IELIIDGGAGMLEATTIIDLTGPEPELVREGRG 200
>gi|443312146|ref|ZP_21041766.1| Sua5/YciO/YrdC/YwlC family protein [Synechocystis sp. PCC 7509]
gi|442777824|gb|ELR88097.1| Sua5/YciO/YrdC/YwlC family protein [Synechocystis sp. PCC 7509]
Length = 218
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 26/223 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + +E +V L+ GAV + P+DT+YAI CDL SA+ER+R+IK + K
Sbjct: 4 FYNLHPDNPQTRSIEQIVNQLRSGAVMLYPSDTVYAIGCDLNVKSAVERVRQIKQLSNDK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL + TY DG +R +KH +PGPYTF+L A+K VP+ +
Sbjct: 64 PLTFLCPSLSQVATYAVV---SDGA-----YRIMKHLIPGPYTFLLPATKLVPRLVLNPK 115
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK G+R+P++ +C A+LQ ++ P+IST+ L E + PV+ + E
Sbjct: 116 --------RKTTGIRVPDNQVCLALLQALENPIISTAAH-LTAAEDEITPVLDINISRFE 166
Query: 182 GLD--------FVVDGGVRVAEP-STVVDMTGTYPKIIRQGKG 215
D + DG + ++ ST++D+TG P I R+G G
Sbjct: 167 LFDRLEKLVDVIIDDGSEKTSDRVSTIIDLTGDAPIIARRGLG 209
>gi|312172531|emb|CBX80787.1| Uncharacterized protein yciO [Erwinia amylovora ATCC BAA-2158]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE+L +G+V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 10 PDNPQPRLIKQAVEMLNKGSVIVYPTDSGYALGCKLEDKSAMERICRIRQLDGNHNFTLM 69
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 70 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS------- 114
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D +
Sbjct: 115 -EKRKTIGLRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDEIG-KLVDLI 172
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P+++R+G G
Sbjct: 173 IHGGFLGQQPTTVIDLTENTPEVVREGVG 201
>gi|390955059|ref|YP_006418817.1| translation factor SUA5 [Aequorivita sublithincola DSM 14238]
gi|390421045|gb|AFL81802.1| translation factor SUA5 [Aequorivita sublithincola DSM 14238]
Length = 205
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 124/204 (60%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VV++L++G V + P+DT+YA+ CD+KS+ A+ER+ +++ V+ K S +C L +
Sbjct: 16 EIKRVVKILRDGGVIIYPSDTVYALGCDIKSNRAMERVAQLRGVKLEKANFSFVCEDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL + +P + + +K
Sbjct: 76 LSDYVK-------QIDTPTFKLLKRNLPGPYTFILPGNNNLP----------SVFKKKKE 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P+++I +AI+Q++ P+ISTS+K + E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNSITRAIVQELGNPIISTSIKDEDEVIEYTTDPELILEKWD-NLVDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
PSTV+D+TG P ++R+GKG
Sbjct: 178 GGNIPSTVIDLTGDEPIVVREGKG 201
>gi|431795767|ref|YP_007222671.1| Sua5/YciO/YrdC/YwlC family protein [Echinicola vietnamensis DSM
17526]
gi|430786532|gb|AGA76661.1| Sua5/YciO/YrdC/YwlC family protein [Echinicola vietnamensis DSM
17526]
Length = 209
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 125/216 (57%), Gaps = 19/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + ++ VVE+L+ G V + PTDT+Y I CD+ + AIER+ IK V+P K
Sbjct: 5 FIKIYPENPNPREVNRVVEVLRRGGVVIYPTDTIYGIGCDIYNQKAIERICLIKGVKPQK 64
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I YT +F+ +K LPGP+TFIL A+ +VPK
Sbjct: 65 QNFSFICYDLSNISEYTRVV-------STPVFKVMKKALPGPFTFILDANNKVPKLL--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
+S +K VG+RIP+ +I + +++++ P+++TS++ D E+ DP +I + Y
Sbjct: 115 ------HSKKKTVGIRIPDHSIPRILVKELGQPIVTTSIRDEDDVLEYSTDPELIYEKY- 167
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STVVD TG +I+RQG+G
Sbjct: 168 KDLVDVVIDGGYGNNVASTVVDCTGDEIEILRQGQG 203
>gi|120555438|ref|YP_959789.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter aquaeolei VT8]
gi|387814854|ref|YP_005430341.1| RNA binding protein with YrdC/RibB domain [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|120325287|gb|ABM19602.1| Sua5/YciO/YrdC/YwlC family protein [Marinobacter aquaeolei VT8]
gi|302608188|emb|CBW44443.1| putative RNA binding protein with YrdC/RibB domain [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339871|emb|CCG95918.1| putative RNA binding protein with YrdC/RibB domain [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 207
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+L++G V V PTD+ YA+ C L A +R++RI+ ++
Sbjct: 4 FFQIHPETPQKRLIKQAVEILRKGGVIVYPTDSGYALGCHLGDKQAADRIKRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L DI Y + +R +K+ PGPYTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSDIGVY--------AKVDNTQYRLLKNFTPGPYTFILDATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I + +L ++ P++S+++ + E + DP I +T G E
Sbjct: 113 -----HPKRRSIGIRVPDNEIVRELLGELGEPIMSSTLILPGETEPLTDPYDIRETLGHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG E +TVV+ TG P++ R GKG
Sbjct: 168 -LDLIIDGGFCGMEATTVVNFTGDVPEVTRVGKG 200
>gi|386333892|ref|YP_006030063.1| rna-binding protein, yrdc [Ralstonia solanacearum Po82]
gi|334196342|gb|AEG69527.1| rna-binding protein, yrdc [Ralstonia solanacearum Po82]
Length = 207
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPEHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++RQG+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRQGRG 200
>gi|226941023|ref|YP_002796097.1| SUA5/YciO/YrdC/YwlC family protein [Laribacter hongkongensis HLHK9]
gi|226715950|gb|ACO75088.1| SUA5/YciO/YrdC/YwlC family protein [Laribacter hongkongensis HLHK9]
Length = 210
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 124/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V++++EG V V PTD+ YA+ C L A++R+ I+ ++
Sbjct: 4 FFSIHPETPQARLIREAVKIVREGGVIVYPTDSCYALGCRLSDKKAMDRIITIRQLDLRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C +L ++ TY R D ++R +K PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCHNLSELGTYA----RVDN----TVYRLLKSVTPGAYTFILQATKEVPRRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++AI A+L+++ P++S ++ +NE DP I DT GP+
Sbjct: 113 -----HPKRQTIGLRVPDNAIALALLEELGEPMLSCTLMLPGENEPPSDPYDIRDTIGPQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG +P+TV+D+T P+++R+G G
Sbjct: 168 -VDLVIDGGYCGVDPTTVIDLTSGAPELVRKGSG 200
>gi|292899585|ref|YP_003538954.1| hypothetical protein EAM_1875 [Erwinia amylovora ATCC 49946]
gi|291199433|emb|CBJ46550.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
Length = 206
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ VE+L +G+V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++CR L ++
Sbjct: 17 IKQAVEMLNKGSVIVYPTDSGYALGCKLEDKSAMERIWRIRQLDGNHNFTLMCRDLSELS 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY FR +K+ PG YTFIL A+KEVP++ + RK +G
Sbjct: 77 TY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS--------EKRKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D ++ GG
Sbjct: 121 LRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDEIG-KLVDLIIHGGFLGQ 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+P+TV+D+T P+++R+G G
Sbjct: 180 QPTTVIDLTENTPEVVREGVG 200
>gi|167586772|ref|ZP_02379160.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ubonensis Bu]
Length = 210
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAVEIVNKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDDRQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ + E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPEHAITLALLESLGQPLLGTTLILPPEEEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG EPSTV+D+T P+++R G+GP
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTADEPQLVRAGRGP 201
>gi|420149094|ref|ZP_14656275.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|394754156|gb|EJF37597.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
335 str. F0486]
Length = 206
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 120/201 (59%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLRRGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+PN+ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 123 VPNNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G PK++R+GKG
Sbjct: 181 VASTVIDLSGDTPKVLREGKG 201
>gi|434396986|ref|YP_007130990.1| Sua5/YciO/YrdC/YwlC family protein [Stanieria cyanosphaera PCC
7437]
gi|428268083|gb|AFZ34024.1| Sua5/YciO/YrdC/YwlC family protein [Stanieria cyanosphaera PCC
7437]
Length = 217
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 24/226 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +P +E + LK+GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL
Sbjct: 6 ELNPYNPQPRSIEAIATALKKGAVMLYPTDTVYAIGCDLNAKSAVERVRKIKQMSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ + SL +I Y R +R +KH +PG YTF+L A+K VPK +
Sbjct: 66 TFISSSLSNISQYAWVSDRA--------YRIMKHLIPGAYTFLLPATKLVPKLVMS---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYG--P 180
RK G+R+P+ +CQ +L+ +D P+ISTS ++ E+ V A +
Sbjct: 114 ----PKRKTTGIRVPDHQVCQDLLKALDNPIISTSAHLPNQEGEFPTIGVEKARLFDVLD 169
Query: 181 EGLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKGPKLYWMEEED 225
+ +D ++D GV + ST++D+T P IIR+G G W E E+
Sbjct: 170 KSVDLILDNGVEPGFQLSTILDLTTEEPMIIRKGLG----WEEAEN 211
>gi|442321027|ref|YP_007361048.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
gi|441488669|gb|AGC45364.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
Length = 203
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 23/215 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E D ++ VE+L+ G + PTDT Y + CDL S AIERL ++K + KP
Sbjct: 6 LEVDMEHPSPRHIQRAVEVLERGGLVAYPTDTYYGMGCDLGSKKAIERLYQLKGRDKKKP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS LC L D+ Y H + F R +K PG +TFIL A++ VP +
Sbjct: 66 LSFLCPDLSDVARYA----------HVSNFAYRTMKGLTPGAFTFILEATRLVPDLMM-- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+R+P+ + + + + + PL++TSV L + E + D I D G
Sbjct: 114 -------TRQKQVGIRVPDAPLARELARALGRPLVTTSVSNL-EGEPLTDARDIKDALG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLD ++DGGV + EPSTVV + G +I+RQGKG
Sbjct: 165 HGLDLILDGGVTLNEPSTVVSLIGDTLEILRQGKG 199
>gi|218247212|ref|YP_002372583.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 8801]
gi|218167690|gb|ACK66427.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 8801]
Length = 217
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 20/213 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +E + L++GAV + PTDT+YAI CDL + +A++R+R++K + KPL+ L
Sbjct: 9 PDNPQFRSIEEITTELQKGAVMLYPTDTVYAIGCDLNNKAAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNIADYALVSDEA--------YRIMKRVIPGPYTFLLPATKLVPKLVMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-KDNEWMVDPVVIADTYG--PEGL 183
RK G+R+PN +ICQ ILQ + P++S+S +D E+ + A + +
Sbjct: 114 -PKRKTTGIRVPNHSICQMILQNLGNPIVSSSAHLPDEDGEFPTLELEKAKLFDRLDHQV 172
Query: 184 DFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
D ++D G+ E ST++DMT P +IRQG G
Sbjct: 173 DLIIDNGLEPGFEVSTILDMTSEEPAVIRQGLG 205
>gi|170694767|ref|ZP_02885918.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia graminis C4D1M]
gi|170140398|gb|EDT08575.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia graminis C4D1M]
Length = 211
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 120/225 (53%), Gaps = 17/225 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V+++ +G V +PTD+ YA+ C L A+ERLRRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLVKQAVQIINDGGVVALPTDSSYALACHLDDKDAVERLRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL ++ PL+ +++ + + +P I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILGELGQPLLGSTLILPGETAPLNEPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
LD V+DGG V EPSTV+D+TG P ++R G+G + EE A
Sbjct: 168 -LDLVIDGGACVCEPSTVIDLTGDEPVLVRAGRGSLAPFGLEETA 211
>gi|171322306|ref|ZP_02911138.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria MEX-5]
gi|172061054|ref|YP_001808706.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria MC40-6]
gi|171092368|gb|EDT37729.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria MEX-5]
gi|171993571|gb|ACB64490.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria MC40-6]
Length = 210
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ +++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAADIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|398344101|ref|ZP_10528804.1| putative translation factor Sua5 [Leptospira inadai serovar Lyme
str. 10]
Length = 205
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 17/218 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + L V L EG V + PTDT+Y ++ D +SHS +E+L ++KN+ +
Sbjct: 1 MILSIHPKNPEKRILGQVSHRLSEGGVYIFPTDTVYGLIADSQSHSGVEKLYKLKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS+LC ++ Y Q FR +K PGP+TFI+ A+K +P R
Sbjct: 61 QPLSLLCPNISVASHYIE-------QLSNEAFRLMKRITPGPFTFIVKANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K K++G+RIP+ QA+++ PL STSV ++K+ E+++D ++ + YG
Sbjct: 110 SFTNQK---DKNIGIRIPDSRYLQALMEIHPNPLTSTSV-FIKE-EFIIDVEMLEEEYG- 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ +D +VDGG+ E ST++D TG I R+GKG +L
Sbjct: 164 DRVDGIVDGGIFQVELSTILDCTGDGIVITREGKGMEL 201
>gi|372268637|ref|ZP_09504685.1| hypothetical protein AlS89_12080 [Alteromonas sp. S89]
Length = 207
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + +++ G V V PTD+ YAI C L A+ER+R ++ ++
Sbjct: 4 FFQIHPENPQARLINQAADIVSSGGVIVFPTDSAYAIGCRLGEKMAVERIRALRQLDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + D Q +FR +K+ PGPYTFI+ A+ EVP++
Sbjct: 64 NFTLMCRDLSELATYA----KVDNQ----MFRLLKNHTPGPYTFIMPATSEVPRRLA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++ I QA++ + PL+S S+ + + + DP I DT +
Sbjct: 113 -----HAKRKTIGLRVPDNPIVQALISTLGEPLMSCSLIMPGEEQPLTDPYDIRDTLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+DGG E +TVVD+TG P ++RQG G
Sbjct: 168 -VELVIDGGFCGLEATTVVDLTGDDPVLVRQGCG 200
>gi|115352187|ref|YP_774026.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria AMMD]
gi|115282175|gb|ABI87692.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia ambifaria AMMD]
Length = 210
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ +++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAADIVSKGGVIAMPTDSSYALACHLDDKGAVERVRRIRGLDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRQIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|255532909|ref|YP_003093281.1| Sua5/YciO/YrdC/YwlC family protein [Pedobacter heparinus DSM 2366]
gi|255345893|gb|ACU05219.1| Sua5/YciO/YrdC/YwlC family protein [Pedobacter heparinus DSM 2366]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 23/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + +E +V++LK+G + + PTDT+Y + CD+ + AIE++ R++ ++P
Sbjct: 1 MLIKIYPENPNPKAIEQIVDVLKKGGLIIYPTDTVYGLGCDITNQKAIEKICRLRGIKPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C LR I + FR +K LPGP+TFIL A+ VPK
Sbjct: 61 KANFSFICSDLRHISDFIKPI-------DTATFRVLKKALPGPFTFILNANNNVPKLL-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIAD 176
S +K VG+R+P++ I + I++++ P++STS++ D+ E+ DP +I +
Sbjct: 112 -------SSNKKTVGIRVPDNDIAREIVRQLGNPILSTSIR--DDDEVIEYSTDPELIHE 162
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y +D V+DGG E STVVD T +IIR+GKG
Sbjct: 163 KY-ENTVDMVIDGGFGDNEASTVVDCTSGDFEIIREGKG 200
>gi|93005341|ref|YP_579778.1| Sua5/YciO/YrdC/YwlC [Psychrobacter cryohalolentis K5]
gi|92393019|gb|ABE74294.1| translation factor SUA5 [Psychrobacter cryohalolentis K5]
Length = 205
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 121/208 (58%), Gaps = 19/208 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +E V +LL++ + + PTDT YA C L + A+E+L++I+ ++ ++L
Sbjct: 8 PENPQPRLIEQVADLLRKDQLIIYPTDTSYAFGCRLGAKDALEKLKQIRALDDKHQFTLL 67
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L +I Y N+ F+ +K P P TFIL A+K+VPKK
Sbjct: 68 CRDLSEIANYA---------AVDNVQFKQLKSHTPAPITFILNATKDVPKKLA------- 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
++ +K +G+R+P++AI QA+L+ MD P++++S+ ++ + DP I + G + +D
Sbjct: 112 -HAKKKTIGIRVPSNAIAQALLEAMDEPILTSSLILPNRDDILDDPFEIEELLGNQ-IDG 169
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQG 213
+++ G++ + +T+VDMT + P+IIRQG
Sbjct: 170 LINAGIKTTKLTTIVDMTSSQPEIIRQG 197
>gi|427387066|ref|ZP_18883122.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides oleiciplenus YIT
12058]
gi|425725671|gb|EKU88540.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides oleiciplenus YIT
12058]
Length = 204
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ VV++L +G + + PTDT+YAI C AIER+ RIK+++P K LSI+C L I
Sbjct: 15 LQQVVDILNDGGIIIYPTDTMYAIGCHGLKERAIERICRIKDIDPRKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKVDNTTFKLMKRNLPGAFTFILNGTTRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+ AI Q I + +DAP+++T++ +D E+ DP +I + +G + +D ++DGG+
Sbjct: 117 GIRMPDSAIIQEIARILDAPIMTTTLPHDDHEDIEYSTDPELIDEKFG-DLVDLIIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E ST+V+ T +++RQGKG W++E
Sbjct: 176 GGTELSTIVNCTNEEIEVVRQGKG----WLDE 203
>gi|374601020|ref|ZP_09674022.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratus DSM 2801]
gi|423326155|ref|ZP_17303994.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CIP
103059]
gi|373912490|gb|EHQ44339.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratus DSM 2801]
gi|404604471|gb|EKB04099.1| Sua5/YciO/YrdC/YwlC family protein [Myroides odoratimimus CIP
103059]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 126/218 (57%), Gaps = 22/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+V+ P + ++ VVE+L+ G + + PTDT+Y + CD+ + A+ER+ R+K ++
Sbjct: 3 QFVKIYPENPNEKEINKVVEVLRNGGLIIYPTDTVYGLGCDITNTKALERIARLKGIKLE 62
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L +I Y Q + F+ +K LPGPYTFIL + +PK
Sbjct: 63 KANFSFVCHDLSNISDYIK-------QIDTSTFKILKKALPGPYTFILPGNNNLPK---- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
++ +K VG+R+P++ I + I++K+ P++STS+ + +D E+ DP +I +
Sbjct: 112 ------EFRKKKTVGIRVPDNNIAREIVRKLGNPIVSTSI-YDEDEILEYTTDPELILEK 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + +D ++DGG + STV+D++ P+IIR+GKG
Sbjct: 165 WDNK-VDLIIDGGYGDNQASTVIDLSEFEPEIIREGKG 201
>gi|383814077|ref|ZP_09969500.1| hypothetical protein SPM24T3_06973 [Serratia sp. M24T3]
gi|383297275|gb|EIC85586.1| hypothetical protein SPM24T3_06973 [Serratia sp. M24T3]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ V++L++G+V V PTD+ YA+ C L+ ++ER+ RI+ ++ +
Sbjct: 4 YFYVHPENPQPRLVKQAVDMLRKGSVIVYPTDSGYALGCRLEDKGSMERICRIRQLDGNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLVCRDLSELSTY--------AYVDNTAFRLIKNNTPGSYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L ++ PL+ST++ ++ DP I D+ G +
Sbjct: 114 ------DKRKTIGLRVPSNPIALALLDELGEPLMSTTLMLPGNDFAQADPEEIKDSIG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +P+TV+D+T + P++IR+G G
Sbjct: 167 LVDLILDGGSIGQQPTTVIDLTDSIPEVIREGAG 200
>gi|293395933|ref|ZP_06640214.1| Sua5/YciO/YrdC/YwlC family protein [Serratia odorifera DSM 4582]
gi|291421431|gb|EFE94679.1| Sua5/YciO/YrdC/YwlC family protein [Serratia odorifera DSM 4582]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLINQAVEVLRKGGVIVYPTDSGYALGCKLEEKAAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNSAFRLIKNNTPGHYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L++++ P++ST++ ++ DP I+D G + ++ V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEELNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VELV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESSPEVVREGAG 200
>gi|259908328|ref|YP_002648684.1| hypothetical protein EpC_16760 [Erwinia pyrifoliae Ep1/96]
gi|387871180|ref|YP_005802553.1| hypothetical protein EPYR_01802 [Erwinia pyrifoliae DSM 12163]
gi|224963950|emb|CAX55455.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283478266|emb|CAY74182.1| Uncharacterized protein yciO [Erwinia pyrifoliae DSM 12163]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE+L +G+V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLIKQAVEMLNKGSVIVYPTDSGYALGCKLEDKSAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDEIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P+++R+G G
Sbjct: 172 IHGGYLGQQPTTVIDLTEVAPEVVREGVG 200
>gi|398793860|ref|ZP_10554104.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. YR343]
gi|398209931|gb|EJM96593.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. YR343]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + V+ L +G+V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +
Sbjct: 4 YFHIHPDNPQPRLVNQAVDYLNKGSVIVYPTDSGYALGCRLEEKNAMERICRIRQLDGNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLMCRDLSELSTY--------AQVDNSAFRILKNNTPGNYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ + AIL++++ P++STS+ ++ DP I + G +
Sbjct: 114 ------DKRKTIGLRVPSNPVALAILERLNEPMMSTSLMLPGNDFTESDPEEIQYSIG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +P+TV+D+T P ++R+G G
Sbjct: 167 LVDLIIDGGTLGQQPTTVIDLTSDAPVVVREGVG 200
>gi|300716950|ref|YP_003741753.1| hypothetical protein EbC_23750 [Erwinia billingiae Eb661]
gi|299062786|emb|CAX59906.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VELL +G+V V PTD+ YA+ C L+ SA+ER+ +I+ ++ + +++
Sbjct: 9 PENPQPRLIKQAVELLNKGSVIVYPTDSGYALGCKLEDKSAMERICKIRKLDGNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AHVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++STS+ ++ DP I D+ G + +D +
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG P+TV+D+T P+++R+G G
Sbjct: 172 IHGGYLGQHPTTVIDLTENTPEVVREGVG 200
>gi|333376950|ref|ZP_08468686.1| Sua5/YciO/YrdC/YwlC family protein [Dysgonomonas mossii DSM 22836]
gi|332886163|gb|EGK06407.1| Sua5/YciO/YrdC/YwlC family protein [Dysgonomonas mossii DSM 22836]
Length = 202
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 125/217 (57%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ + +++ VV +L++G + + PTDT+YAI CD + A+E + ++K++ P+
Sbjct: 1 MLIKLYEQNPNQKEIDRVVSVLQDGGLIIYPTDTVYAIGCDALNVRAVEEICKMKDINPA 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L +I Y + IF+ +K LPGP+TFIL + +PK
Sbjct: 61 KSNLSIICYDLSNISEY--------AKVDNAIFKLMKKNLPGPFTFILNTTSSLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
Y +K VG+RIP++ I + +++ + P+++TSVK + E+ DP +I + Y
Sbjct: 109 ------IYKNKKTVGIRIPDNNIIRELVRNLGNPILTTSVKDEDEVVEYTTDPELIYEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E STVVD T P+IIRQGKG
Sbjct: 163 -QDKVDIVIDGGFGGIEGSTVVDCTSDEPEIIRQGKG 198
>gi|409197509|ref|ZP_11226172.1| Sua5/YciO/YrdC/YwlC family protein [Marinilabilia salmonicolor JCM
21150]
Length = 205
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ P + +++ VVE L+ G + + PTDT+Y + CD+ + A+E++ RIK + P
Sbjct: 1 MLVKIYPENPNPREIQKVVEALRNGGIVIYPTDTVYGLGCDINNTKALEKIARIKGINPK 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C L + YT P G F+ VK LPGP+TFIL AS VPK
Sbjct: 61 KDHLSFICHDLSHLSDYTK--PLGSAT-----FKLVKKNLPGPFTFILQASNSVPKFF-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
S +K +G+RIP++ I I++++ P++STS+K + E+ DP +I + Y
Sbjct: 112 -------KSNKKTIGLRIPDNPIIIEIVKELGNPILSTSIKDEDEILEYTTDPELIHEKY 164
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMT--GTYPKIIRQGKG 215
+D V+DGG E ST+VD T G + +I+RQGKG
Sbjct: 165 -QNLVDIVIDGGYGGNEASTIVDCTTEGEF-EIVRQGKG 201
>gi|394988624|ref|ZP_10381459.1| Sua5/YciO/YrdC/YwlC [Sulfuricella denitrificans skB26]
gi|393792003|dbj|GAB71098.1| Sua5/YciO/YrdC/YwlC [Sulfuricella denitrificans skB26]
Length = 210
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 18/207 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE+++ G V PTD YA+ C L A +R+R I+ V+ PL+++CR L +I Y
Sbjct: 21 VEIIRNGGVIAYPTDASYALGCGLGDREAQQRIRAIRGVDEDHPLTLVCRDLAEISVYAK 80
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
R FR +K PG YTFIL A++EVPK+ ++ RK +G+R+P
Sbjct: 81 VDNRQ--------FRLLKANTPGCYTFILEATREVPKRL--------QHPKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ I QA+L ++ PL+ST+++ D + + DP I D + +D VVDGG + +T
Sbjct: 125 DHPILQALLAELGGPLLSTTLQLPGDEQPLNDPYDIRDLLERQ-VDLVVDGGYGDVDTTT 183
Query: 199 VVDMTGTYPKIIRQGKGP-KLYWMEEE 224
V+D++G P ++R GKG + +EEE
Sbjct: 184 VIDLSGETPVLLRAGKGDIHPFGLEEE 210
>gi|399021401|ref|ZP_10723509.1| Sua5/YciO/YrdC/YwlC family protein [Herbaspirillum sp. CF444]
gi|398091894|gb|EJL82318.1| Sua5/YciO/YrdC/YwlC family protein [Herbaspirillum sp. CF444]
Length = 208
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 18/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ + P ++ ++L+ G + +PTD+ YA+VC L +A+ERLRRI+ V+
Sbjct: 3 QFFQIHPDNPQLRLIKQAAQILRGGGIVALPTDSCYALVCQLDDKNAVERLRRIRGVDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I Y R +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSEIAQYAKVDNRQ--------YRLLKAATPGPYTFILEATKEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P + I A+L ++ PLI T++ ++ + D I D
Sbjct: 112 -----SHPSRKTIGLRVPENQIAHALLAELGQPLIGTTLILPDQDDALTDAEEIRDRLEK 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+ ++ V+D G EP+TV+D++ + P ++RQG+G
Sbjct: 167 Q-VELVIDSGACSLEPTTVIDLSDDSEPVLVRQGRG 201
>gi|428300617|ref|YP_007138923.1| translation factor SUA5 [Calothrix sp. PCC 6303]
gi|428237161|gb|AFZ02951.1| translation factor SUA5 [Calothrix sp. PCC 6303]
Length = 217
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 124/232 (53%), Gaps = 37/232 (15%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S ++E + L+ GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQSRRIEEIHTELQRGAVMLYPTDTVYAIGCDLNAKSAVERVRQIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDVA------YRIMKSLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---WMVDP-----VVIADTY 178
RK G+R+PN C A+L+ + P+ISTS L D E W P V + D
Sbjct: 113 SPKRKTTGIRVPNHIACLALLESLGNPIISTSAHILLDEEDDNWSESPANMTQVELFDRL 172
Query: 179 GPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
P +D ++D G EP ST++D+T P ++R+G G W EE DA
Sbjct: 173 EP-MVDLIIDTG---EEPTYKVSTILDLTAEQPVMVRKGLG----W-EEADA 215
>gi|257061454|ref|YP_003139342.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 8802]
gi|256591620|gb|ACV02507.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 8802]
Length = 217
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +E + L++GAV + PTDT+YAI CDL + +A++R+R++K + KPL+ L
Sbjct: 9 PDNPQFRSIEEITTELQKGAVMLYPTDTVYAIGCDLNNKAAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNIADYALVSDEA--------YRIMKRVIPGPYTFLLPATKLVPKLVMSPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE-----WMVDPVVIADTYGPE 181
RK G+R+PN +ICQ ILQ + P++S+S L D E ++ + D +
Sbjct: 116 ---RKTTGIRVPNHSICQMILQNLGNPIVSSSAH-LPDEEGEFPTLELEKAKLFDRLDHQ 171
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D G+ E ST++DMT P +IRQG G
Sbjct: 172 -VDLIIDNGLEPGFEVSTILDMTSEEPAVIRQGLG 205
>gi|385788477|ref|YP_005819586.1| hypothetical protein EJP617_30180 [Erwinia sp. Ejp617]
gi|310767749|gb|ADP12699.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE+L +G+V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLIKQAVEMLNKGSVIVYPTDSGYALGCKLEDKSAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPIALALLEALNEPMMSTSLMLPGNDFTESDPEAIQDEIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P+++R+G G
Sbjct: 172 IHGGYLGQQPTTVIDLTEVAPEVVREGVG 200
>gi|237748690|ref|ZP_04579170.1| translation factor [Oxalobacter formigenes OXCC13]
gi|229380052|gb|EEO30143.1| translation factor [Oxalobacter formigenes OXCC13]
Length = 208
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+E P ++ ++++ G V V+PTD+ YA+VC L +A++R+R+I+ ++
Sbjct: 5 YLEIHPVDPQDRLVKKAADIIRAGGVIVLPTDSSYALVCRLDDKAAVDRIRQIRQIDERH 64
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L+++ +Y Q +R +K PG +TFIL ASKEVP++
Sbjct: 65 LLTLLCRDLKEVGSY--------AQVDNGSYRLLKSATPGAFTFILRASKEVPRRL---- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++ I QA+L ++ PLI T+V + + + VI + +
Sbjct: 113 ----SHPSRKTIGLRIPDNRIVQALLDELGEPLIGTTVILPGEEDPYTEGDVIQERL-EK 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVDGG P+TVVD+TG +++R GKG
Sbjct: 168 LVDAVVDGGACGLLPTTVVDLTGREAELVRSGKG 201
>gi|298372929|ref|ZP_06982919.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroidetes oral taxon 274
str. F0058]
gi|298275833|gb|EFI17384.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroidetes oral taxon 274
str. F0058]
Length = 212
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M+V + ++ V+E+LK G V + PTDT+YA CD+ AIE++ R+K++ P
Sbjct: 12 MHVRIYEENPNEHQIAKVIEVLKNGGVIIYPTDTVYAFGCDIFHPKAIEKICRLKHLNPQ 71
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K ++I+C+ L +I Y + + F+ +K LPG +TF+L S+++P
Sbjct: 72 KSRMAIVCQDLSNISNY--------AKISTDTFKLLKKNLPGAFTFLLNGSRQLP----- 118
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
+ RK +G+R+P + I I++++ P+ +TSV + D E+ DP ++ + Y
Sbjct: 119 -----SILKDRKTIGIRMPKNNIALDIVRQLGNPIFTTSVIAIDDITEYETDPELLTEKY 173
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG PST+VD T P+IIRQGKG
Sbjct: 174 -EDVVDMVIDGGFGDNTPSTIVDCTQNEPEIIRQGKG 209
>gi|350570031|ref|ZP_08938406.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria wadsworthii 9715]
gi|349797491|gb|EGZ51251.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria wadsworthii 9715]
Length = 206
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 18/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G + V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIINKGGIVVYPTDSCYALGCHLGDKEAMERILRIRQIDQKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCGDLSELGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+LQ++ PL+S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNKIALALLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPK 217
+D V+DGG EP+TVVDMT ++IR GKG K
Sbjct: 167 SVDLVIDGGWCGTEPTTVVDMTDGV-ELIRAGKGDK 201
>gi|134296280|ref|YP_001120015.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia vietnamiensis G4]
gi|387902635|ref|YP_006332974.1| YciO protein [Burkholderia sp. KJ006]
gi|134139437|gb|ABO55180.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia vietnamiensis G4]
gi|387577527|gb|AFJ86243.1| YciO protein [Burkholderia sp. KJ006]
Length = 210
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ +++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLVKQAADIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D+E + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDAPQLVRAGRG 200
>gi|404485128|ref|ZP_11020331.1| Sua5/YciO/YrdC/YwlC family protein [Barnesiella intestinihominis
YIT 11860]
gi|404339218|gb|EJZ65655.1| Sua5/YciO/YrdC/YwlC family protein [Barnesiella intestinihominis
YIT 11860]
Length = 203
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 24/214 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-P 62
E +P+ + K VE+L+EG + + PTDT+YA+ CD + A+ER+ RIK + P K
Sbjct: 8 EENPNATEIGK---AVEVLREGGIVIYPTDTIYALGCDALNVRAVERICRIKGINPQKVN 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
LSI+CR L + Y + + F+ +K LPG +TFIL S +PK
Sbjct: 65 LSIICRELSWVSEY--------AKLNNLYFKLLKRNLPGAFTFILPTSSSLPK------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPE 181
Y RK VGVRIP+ AI A+++ + PL++TSV + E+ DP +IA+ Y
Sbjct: 110 ---IYKNRKTVGVRIPDHAITLALVEALGNPLLTTSVSVDDEEPEYGTDPELIAERYESV 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
D ++DGG PST VD TG P ++R+GKG
Sbjct: 167 A-DLIIDGGEGGTIPSTTVDCTGDEPVVLREGKG 199
>gi|398349124|ref|ZP_10533827.1| putative translation factor Sua5 [Leptospira broomii str. 5399]
Length = 205
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 17/218 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + L V L EG V + PTDT+Y ++ D +SHS +E+L ++KN+ +
Sbjct: 1 MILSIHPKNPEKRILGQVSHRLSEGGVYIFPTDTVYGLIADSQSHSGVEKLYKLKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS+LC ++ Y Q FR +K PGP+TFI+ A+K +P R
Sbjct: 61 QPLSLLCPNISVASHYIE-------QLSNESFRLMKRITPGPFTFIVKANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K K++G+RIP+ QA+++ PL STSV ++K+ E+++D ++ + YG
Sbjct: 110 SFTNQK---DKNIGIRIPDSRYLQALMEIHPNPLTSTSV-FIKE-EFIIDVEMLEEEYG- 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ +D +VDGG+ E ST++D TG I R+GKG +L
Sbjct: 164 DRVDGIVDGGIFQVELSTILDCTGDGIVITREGKGMEL 201
>gi|351730987|ref|ZP_08948678.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax radicis N35]
Length = 211
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL++G + VPTD+ YA+VC L A++R+RRI+ V+
Sbjct: 4 YFEVHPDNPQPRLLKQGAMLLQKGGILAVPTDSSYALVCHLDDKDAVDRMRRIRQVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ Q +L+ APL++T++ + E + DP I + Y +
Sbjct: 111 ---VSHPSRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPAGETEPLNDPQEIRERY-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+D VVD G EP+TVVD+ TG P+++R+G+G
Sbjct: 167 LVDAVVDAGACPLEPTTVVDLTPMGTGGDPEVVREGRG 204
>gi|374584469|ref|ZP_09657561.1| Sua5/YciO/YrdC/YwlC family protein [Leptonema illini DSM 21528]
gi|373873330|gb|EHQ05324.1| Sua5/YciO/YrdC/YwlC family protein [Leptonema illini DSM 21528]
Length = 208
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 127/227 (55%), Gaps = 21/227 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + ++ V++ L GA+ +VPTDT+YA +C L+ AI L RIK++
Sbjct: 1 MILPCHPVNPEKRTIQKVLDGLSRGAIYIVPTDTVYAFICHLEHPKAISSLYRIKDMSEK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS+LCR + +T P +FR +K PGPYTFIL ASK++ ++ +
Sbjct: 61 QPLSLLCRDISMAGLFTKNIP-------DYVFRFMKQHTPGPYTFILPASKDMDRRGM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
RK VG+RI + + +++++D PL+STSV+ ++ ++ P + D YG
Sbjct: 112 -------GKRKEVGIRIVDHPLHIELMKQLDVPLVSTSVREVE--AFVTSPETLEDIYGY 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP--KLYWMEEED 225
+ ++ V+D G R E +T++D G K+IR G GP L ++ +ED
Sbjct: 163 Q-VEAVLDAGPRKNEYTTILDGQGDQFKLIRSGIGPIDDLDYLADED 208
>gi|270262116|ref|ZP_06190388.1| hypothetical protein SOD_b03230 [Serratia odorifera 4Rx13]
gi|421783839|ref|ZP_16220284.1| sua5/YciO/YrdC/YwlC family protein [Serratia plymuthica A30]
gi|270043992|gb|EFA17084.1| hypothetical protein SOD_b03230 [Serratia odorifera 4Rx13]
gi|407754023|gb|EKF64161.1| sua5/YciO/YrdC/YwlC family protein [Serratia plymuthica A30]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 121/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLINQAVDVLRKGGVIVYPTDSGYALGCKLEEKSAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++ST++ ++ DP I+D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEVLNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESAPEVVREGAG 200
>gi|421896896|ref|ZP_16327291.1| rna-binding protein, yrdc [Ralstonia solanacearum MolK2]
gi|206588061|emb|CAQ18641.1| rna-binding protein, yrdc [Ralstonia solanacearum MolK2]
Length = 207
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPEHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVREGRG 200
>gi|388257236|ref|ZP_10134415.1| Sua5/YciO/YrdC/YwlC family protein [Cellvibrio sp. BR]
gi|387938403|gb|EIK44955.1| Sua5/YciO/YrdC/YwlC family protein [Cellvibrio sp. BR]
Length = 191
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 119/196 (60%), Gaps = 17/196 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
+++++G V PTD+ YA+ C + A+ER+R ++ ++ + +++CR L ++ TY
Sbjct: 5 DIIRKGGVVAYPTDSAYALGCHIGDKDALERIRTLRKLDKNHNFTLMCRDLSELATYA-- 62
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
R D Q +FR +K+ PG YTFIL A+ +VP++ + + RK +G+R+P+
Sbjct: 63 --RVDNQ----VFRLLKNHTPGAYTFILEATADVPRRLM--------HPKRKTIGLRVPD 108
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
+AI A+L+++ PL+++S+ + M DP I DT ++ V+DGG EP+TV
Sbjct: 109 NAIALALLEELGEPLMTSSLLLPGEEFPMTDPYDIRDTL-EHFVELVIDGGYCGLEPTTV 167
Query: 200 VDMTGTYPKIIRQGKG 215
+D+T P+++RQGKG
Sbjct: 168 IDLTQDVPELVRQGKG 183
>gi|333927509|ref|YP_004501088.1| Sua5/YciO/YrdC/YwlC family protein [Serratia sp. AS12]
gi|333932463|ref|YP_004506041.1| Sua5/YciO/YrdC/YwlC family protein [Serratia plymuthica AS9]
gi|386329332|ref|YP_006025502.1| Sua5/YciO/YrdC/YwlC family protein [Serratia sp. AS13]
gi|333474070|gb|AEF45780.1| Sua5/YciO/YrdC/YwlC family protein [Serratia plymuthica AS9]
gi|333491569|gb|AEF50731.1| Sua5/YciO/YrdC/YwlC family protein [Serratia sp. AS12]
gi|333961665|gb|AEG28438.1| Sua5/YciO/YrdC/YwlC family protein [Serratia sp. AS13]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 119/197 (60%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVIVYPTDSGYALGCKLEEKSAMERICRIRQLDGNHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+ ++ P++ST++ ++ DP I+D G + +D V+ GG +P+T
Sbjct: 125 SNPIALALLEVLNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VDLVIHGGFLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P+++R+G G
Sbjct: 184 VIDLTESAPEVVREGAG 200
>gi|83748250|ref|ZP_00945276.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia solanacearum UW551]
gi|207743518|ref|YP_002259910.1| rna-binding protein, yrdc [Ralstonia solanacearum IPO1609]
gi|83725091|gb|EAP72243.1| Sua5/YciO/YrdC/YwlC family protein [Ralstonia solanacearum UW551]
gi|206594916|emb|CAQ61843.1| rna-binding protein, yrdc [Ralstonia solanacearum IPO1609]
Length = 207
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPEHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVREGRG 200
>gi|37523508|ref|NP_926885.1| hypothetical protein gll3939 [Gloeobacter violaceus PCC 7421]
gi|35214512|dbj|BAC91880.1| gll3939 [Gloeobacter violaceus PCC 7421]
Length = 223
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 32/219 (14%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +L +V+ L+ GAV + PTDT YAI CDL AIER++RIK + KPL+ L
Sbjct: 9 PKDPQPERLGRIVQALRAGAVLLYPTDTTYAIGCDLLHKGAIERVQRIKRLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY GD + +R ++H LPGPYTF+L A++ +PK +
Sbjct: 69 CPSLSNVATYAR---VGD-----DAYRLMRHLLPGPYTFLLPATRALPKLVLD------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ G+R+P+ +CQA+L + PLISTS + +E + + E L V
Sbjct: 114 -PKRRTTGIRVPDHPLCQALLAGLGNPLISTSARSADGSEIRYEYELF------EALAPV 166
Query: 187 VDG----------GVRVAEPSTVVDMTGTYPKIIRQGKG 215
VDG G+ + + STV+D++G P ++R+G G
Sbjct: 167 VDGIVELDPPAQDGLLLTQVSTVIDLSGEQPVVVRRGLG 205
>gi|421495120|ref|ZP_15942423.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas media WS]
gi|407185874|gb|EKE59628.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas media WS]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L+ G V V PTD+ YA+ C + + A+ER+ RI+ +EP+ +++CR L +I TY
Sbjct: 21 VQILQNGGVIVYPTDSGYALGCQMGNKDALERICRIRRIEPNHDFTLVCRDLSEISTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR VK+ PGPYTFI A+KEVP++ + +K +G+R+P
Sbjct: 79 ------AKVDNTAFRLVKNNTPGPYTFIFKATKEVPRRLMN--------EKKKTIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ I A+L+ + PL+ST++ DP I D G + LD VV+GG +P+T
Sbjct: 125 ANNIALALLEALGEPLLSTTLILPGSEMAEFDPEEIFDKLGKQ-LDLVVNGGYLGEQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
VVD + P + R+G G
Sbjct: 184 VVDFSDDEPVLRRRGAG 200
>gi|157370905|ref|YP_001478894.1| hypothetical protein Spro_2665 [Serratia proteamaculans 568]
gi|157322669|gb|ABV41766.1| Sua5/YciO/YrdC/YwlC family protein [Serratia proteamaculans 568]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 121/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLINQAVDVLRKGGVIVYPTDSGYALGCKLEEKSAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++ST++ ++ DP I+D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEVLNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESAPEVVREGAG 200
>gi|222055790|ref|YP_002538152.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter daltonii FRC-32]
gi|221565079|gb|ACM21051.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter daltonii FRC-32]
Length = 202
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P L VE+L++G V PTDT Y I C + + IER+ IK +
Sbjct: 1 MLLEINPQNPQPRLLAQAVEILEKGGVVAYPTDTTYGIGCSIFNKKGIERIYAIKQRDRK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L DI Y + F+ +K LPGPYTFIL A+ VP C+
Sbjct: 61 KPFSFICADLSDIAHY--------ARVSNYAFKVMKRFLPGPYTFILDATSVVPDLCM-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP + IC AI + + P+I+TS L + + DP + +T G
Sbjct: 111 -------TKQKTVGIRIPANKICLAITKLLGHPIITTSAN-LSGEDPIGDPFQVENTLG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ +D VDGGV A+ S+VV + G P+++R+G G + W E
Sbjct: 162 KLIDLTVDGGVLTADVSSVVSLIGDRPEVLRKGVG-DVSWCE 202
>gi|344344673|ref|ZP_08775534.1| Sua5/YciO/YrdC/YwlC family protein [Marichromatium purpuratum 984]
gi|343803837|gb|EGV21742.1| Sua5/YciO/YrdC/YwlC family protein [Marichromatium purpuratum 984]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 124/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE+L +G V V PTD+ YA+ C L SA+ER+RRI+ ++
Sbjct: 4 FFQIHPVNPQPRLIRRAVEILLKGGVIVYPTDSSYALGCQLGEKSAMERIRRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + D Q FR +K PGPYTFI A+K+VP++ +
Sbjct: 64 NFTLVCRDLSEITTYA----KIDNQA----FRLLKSLTPGPYTFIHHATKQVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ IC+A+L ++D P++S+++ D + DP + + +
Sbjct: 113 -----HPKRKAIGIRVPDNEICRALLGELDQPILSSTLIMPDDEHPLTDPYDMRELLD-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DG EP+TV+DMT P+++RQGKG
Sbjct: 167 HVDLVIDGDFCGLEPTTVIDMTAEPPEVVRQGKG 200
>gi|225010857|ref|ZP_03701325.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacteria bacterium
MS024-3C]
gi|225005065|gb|EEG43019.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacteria bacterium
MS024-3C]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 22/212 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL-SI 65
P+ LE VV L++GA+ + PTDT+Y I CD+ ++ A+E+L ++K V+ K S
Sbjct: 9 PNNPQEAALEKVVRALRDGALIIYPTDTVYGIGCDITNNKALEKLAKLKGVKLEKATWSF 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L +I Y Q F+ +K LPGPYTF+L + +PK
Sbjct: 69 ICADLSNISDYVK-------QIDTATFKILKRSLPGPYTFVLPGNNNLPK---------- 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGL 183
+ RK +G+R+P+ +I + I++ + P++STS+ + D E+ DP +I + + P +
Sbjct: 112 AFKKRKTIGIRVPDHSIPKKIVEMLGNPIVSTSI-YDPDEVLEYTTDPELIFEKWSPH-V 169
Query: 184 DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
FV+DGG PST+VD++G P++IR+GKG
Sbjct: 170 AFVIDGGYGDNVPSTIVDLSGDSPELIRRGKG 201
>gi|440746911|ref|ZP_20926172.1| Sua5 YciO YrdC YwlC family protein [Mariniradius saccharolyticus
AK6]
gi|436484540|gb|ELP40516.1| Sua5 YciO YrdC YwlC family protein [Mariniradius saccharolyticus
AK6]
Length = 231
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 125/217 (57%), Gaps = 19/217 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS- 60
+++ P D K+ +V++L++G + + PTDT+Y + CD+ + AIER+ RIK ++P
Sbjct: 27 FIKLYPENPDMRKVSRIVDILRDGGIIIYPTDTVYGMGCDIHNQRAIERIARIKGIKPKH 86
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I YT +F+ +K LPGPYTFIL A+ VPK
Sbjct: 87 HNFSFICYDLSNISEYTRAL-------STPVFKIMKKALPGPYTFILEANNNVPKIL--- 136
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
S +K VG+R+P+ AI + +++++ +P+++TS++ D E+ DP +I + +
Sbjct: 137 ------NSNKKTVGIRVPDHAIPRLLVKELGSPILTTSIRDDDDVIEYSTDPELIFEKFR 190
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+ +D V+DGG ST++D TG +++R+G GP
Sbjct: 191 -DLVDVVIDGGYGNNVASTILDCTGDDIEVVREGLGP 226
>gi|300691879|ref|YP_003752874.1| hypothetical protein RPSI07_2235 [Ralstonia solanacearum PSI07]
gi|299078939|emb|CBJ51599.1| conserved protein of unknown function, translation factor domain
(SUA5) [Ralstonia solanacearum PSI07]
gi|344174280|emb|CCA86070.1| conserved hypothetical protein, translation factor domain (SUA5)
[Ralstonia syzygii R24]
Length = 207
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNRQ----YRVVKTATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPDHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRKGRG 200
>gi|336173983|ref|YP_004581121.1| Sua5/YciO/YrdC/YwlC family protein [Lacinutrix sp. 5H-3-7-4]
gi|334728555|gb|AEH02693.1| Sua5/YciO/YrdC/YwlC family protein [Lacinutrix sp. 5H-3-7-4]
Length = 206
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ V+E+LK G + + PTDT+Y + CD+ + A+ER+ RIK V+ K LS +C L +
Sbjct: 16 EIKKVIEVLKNGGLVIYPTDTVYGLGCDINNTKALERIARIKGVKLEKANLSFICEDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL SK +P + + +K
Sbjct: 76 LSDYVK-------QIDTATFKILKRALPGPYTFILPGSKSLP----------SVFKKKKE 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+RIPN+ I I++ + PL+STS++ + E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRIPNNNITLEIVKALGNPLVSTSIRDEDEVLEYTTDPELILEKWD-NLVDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
+ ST++D++ P+++R+GKG
Sbjct: 178 GGNQGSTIIDLSNDEPEVVREGKG 201
>gi|166363887|ref|YP_001656160.1| hypothetical protein MAE_11460 [Microcystis aeruginosa NIES-843]
gi|425467677|ref|ZP_18846956.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166086260|dbj|BAG00968.1| hypothetical protein MAE_11460 [Microcystis aeruginosa NIES-843]
gi|389829487|emb|CCI29151.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 213
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLESARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V DG +E ST+VD TG P I+RQG G
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTGDQPDIVRQGLG 205
>gi|153004978|ref|YP_001379303.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter sp. Fw109-5]
gi|152028551|gb|ABS26319.1| Sua5/YciO/YrdC/YwlC family protein [Anaeromyxobacter sp. Fw109-5]
Length = 235
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 19/213 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
VE DP +E V +L G + PTDT Y + CDL AIER+ ++K + S
Sbjct: 35 VEIDPLHPQPRVVERAVSVLSSGGLLAFPTDTYYGLGCDLFDKRAIERIYQLKQLPRSHE 94
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
LS +C+ L +I Y +R ++ +PGPYTFIL A++ VP +R
Sbjct: 95 LSFICQDLAEISRYAI--------VDNAAYRVLRRKVPGPYTFILPATRLVPDLVLRR-- 144
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+K VG+RIP+ I I++++ PLISTS E ++D I + G G
Sbjct: 145 -------QKTVGIRIPDSPIALEIVRRLGHPLISTSAAT-PGGEVLIDAHDIKEQLG-HG 195
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG + EPS+V+D++G P+++R GKG
Sbjct: 196 LDLVLDGGYKPNEPSSVIDLSGAEPRVLRAGKG 228
>gi|449015666|dbj|BAM79068.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 283
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKE---GAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNV 57
+YVE G D W+L+ V ELL++ G VG++PTDT YA VC+L S + +ER+ +K
Sbjct: 41 LYVEVSGDGDDVWRLQNVFELLRDPSRGVVGILPTDTSYAFVCNLHSRTGVERIYSLKKT 100
Query: 58 EPS--KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPK 115
PS KPLS+LCR+ I Y + F+ +K LPGPYTFIL A+ EVP+
Sbjct: 101 PPSVRKPLSLLCRNHAAIQRYALVLDK-------RTFKVLKALLPGPYTFILPATHEVPR 153
Query: 116 KCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDA-PLISTSVKWLKDNEWMVDPV-- 172
+ K R+ +GVR P D CQA + +D L+++SV D+E D V
Sbjct: 154 VMIE-NRVHRKMWKRREIGVRWPRDPYCQAAMDALDGVALLASSV---PDDEVEEDGVDR 209
Query: 173 --VIADTYGPEGLDFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKG 215
+ + +DF+++ G R + STVVD+T + +++R+G G
Sbjct: 210 DYLRMLEHWEHEVDFMINAGARTIGLKSTVVDVTRGW-RVLREGLG 254
>gi|295133073|ref|YP_003583749.1| hypothetical protein ZPR_1214 [Zunongwangia profunda SM-A87]
gi|294981088|gb|ADF51553.1| YrdC domain-containing protein [Zunongwangia profunda SM-A87]
Length = 206
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 120/204 (58%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++ VV+ L+ G + + PTDT+Y + CD+ ++SA+E++ +IK V+ K S +C L +
Sbjct: 16 EITKVVKTLRNGGLVIYPTDTVYGLGCDITNNSALEKIAQIKGVKLEKANFSFICHDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q + F+ +K CLPGPYTFIL + +P + +K
Sbjct: 76 LSDYVK-------QIDTSTFKILKRCLPGPYTFILPGNNNLP----------TVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P++ IC+AI+ ++ P++STS++ + E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNNICRAIVAELGNPIVSTSIRDEDEVIEYTTDPELIQEKWD-NLVDIVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
PSTV+D+T P+++R+GKG
Sbjct: 178 GDNIPSTVIDLTTDQPEVVREGKG 201
>gi|386825289|ref|ZP_10112414.1| hypothetical protein Q5A_13779 [Serratia plymuthica PRI-2C]
gi|386377780|gb|EIJ18592.1| hypothetical protein Q5A_13779 [Serratia plymuthica PRI-2C]
Length = 206
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 121/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLINQAVDVLRKGGVIVYPTDSGYALGCKLEEKSAMERICRIRQLDGNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++ST++ ++ DP I+D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEVLNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESAPEVVREGAG 200
>gi|322833322|ref|YP_004213349.1| Sua5/YciO/YrdC/YwlC family protein [Rahnella sp. Y9602]
gi|384258460|ref|YP_005402394.1| hypothetical protein Q7S_13020 [Rahnella aquatilis HX2]
gi|321168523|gb|ADW74222.1| Sua5/YciO/YrdC/YwlC family protein [Rahnella sp. Y9602]
gi|380754436|gb|AFE58827.1| hypothetical protein Q7S_13020 [Rahnella aquatilis HX2]
Length = 206
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + VELL++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +
Sbjct: 4 YFYIHPENPQPRLINQAVELLRKGQVIVYPTDSGYALGCRLEEKNAMERICRIRQLDSNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLVCRDLSELSTY--------AYVDNAAFRLMKNNTPGNYTFILKATKEVPRRLMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L+ + PL+ST++ ++ DP I D G +
Sbjct: 114 ------EKRKTIGLRVPSNPIAIALLEALGEPLMSTTLMLPGNDFAESDPEDIKDHLG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG +P+TVVD+T P+++R+G G
Sbjct: 167 VVDLVIDGGSIGQQPTTVVDLTEAAPEVVREGAG 200
>gi|94499321|ref|ZP_01305859.1| putative translation factor (SUA5) [Bermanella marisrubri]
gi|94428953|gb|EAT13925.1| putative translation factor (SUA5) [Oceanobacter sp. RED65]
Length = 207
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ ++LK+G + V+PTD YA+ C ++ A+ER++RI+ ++
Sbjct: 4 FFQIHPETPQPRLVKQAADILKQGGLAVIPTDCAYALACHIQDKQALERVKRIRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + +R +K+ PG +TFIL ++EVP++ +
Sbjct: 64 NFTLMCRDLTEISTY--------AKVDNTAYRLLKNHTPGAFTFILDGTREVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI AI++++ PL++TS+ D + DP I
Sbjct: 113 -----HPKRKQIGIRVPDNAIACAIMEELGEPLMTTSLIMPGDTMPLSDPYDIRQML-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVDGG E +TVVDMTG I RQG G
Sbjct: 167 AVDLVVDGGYCGFEATTVVDMTGDEYSITRQGVG 200
>gi|427418976|ref|ZP_18909159.1| Sua5/YciO/YrdC/YwlC family protein [Leptolyngbya sp. PCC 7375]
gi|425761689|gb|EKV02542.1| Sua5/YciO/YrdC/YwlC family protein [Leptolyngbya sp. PCC 7375]
Length = 214
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 24/213 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S+K+E + + L+ GAV + TDT+YAI CDL S +AI+R+R++K + KPL+ L
Sbjct: 9 PESPQSFKVEKIRKQLQSGAVMLYATDTVYAIGCDLLSKNAIKRVRQLKKLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +++ +PGPYTFIL A+K VPK +
Sbjct: 69 CSSLSNIAEY--------AYVSDPAYRTMRYLVPGPYTFILPATKLVPKLVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ A+CQA+L+ + P+ISTS +E + D + +D +
Sbjct: 114 -PKRKTTGIRVPDSAVCQALLKSLGNPIISTSAHTGDMDEAYFSRYELFDALEKQ-VDLI 171
Query: 187 VDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+D AEP ST++DMT P I+R+G G
Sbjct: 172 IDSE---AEPSYLASTILDMTEDEPVILRKGLG 201
>gi|448242436|ref|YP_007406489.1| putative RNA binding protein [Serratia marcescens WW4]
gi|445212800|gb|AGE18470.1| putative RNA binding protein [Serratia marcescens WW4]
gi|453065155|gb|EMF06118.1| hypothetical protein F518_08673 [Serratia marcescens VGH107]
Length = 206
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLINQAVEVLRKGGVIVYPTDSGYALGCMLEEKAAMERICRIRQLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AHVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++ST++ ++ DP I D G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIALALLEALNEPMMSTTLMLPGNDFAESDPEEINDHLG-KVVDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESSPEVVREGAG 200
>gi|344167066|emb|CCA79259.1| conserved hypothetical protein, translation factor domain (SUA5)
[blood disease bacterium R229]
Length = 207
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R +K PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNRQ----YRVIKTATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPDHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P+++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPELVRKGRG 200
>gi|397696807|ref|YP_006534690.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida DOT-T1E]
gi|421523981|ref|ZP_15970608.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida LS46]
gi|397333537|gb|AFO49896.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida DOT-T1E]
gi|402752226|gb|EJX12733.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida LS46]
Length = 209
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YA+ C + SAIER+RR++ ++ +
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSAYALGCQIGDKSAIERVRRLRGLDKTH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 64 NFTLMCCDMSQLGLY--------AKVDTGTFRMLKAHVPGPYTFILNGTREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ AI A+L ++ PL+S S+ D+E M DP I +
Sbjct: 113 -----HDKRRTIGLRVPDHAITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 167 HVDLVIDGGFGDLKASTIIDLSGDEPELIREGCG 200
>gi|300704489|ref|YP_003746092.1| hypothetical protein RCFBP_20293 [Ralstonia solanacearum CFBP2957]
gi|299072153|emb|CBJ43485.1| conserved protein of unknown function, translation factor domain
(SUA5) [Ralstonia solanacearum CFBP2957]
Length = 207
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P+ + E+++ G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFQIHPTTPQGRLIRQAAEIIRAGGLVALPTDSCYALACHLDDKAAVERLRRVRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ T F R D + +R VK PGP+ F+L A+KEVP++
Sbjct: 64 HLTLMCRDLSELAT----FARVDNKQ----YRVVKAATPGPFVFLLEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P I A++ ++ PL+S +++ D+ + + I +
Sbjct: 112 ----SHPSRKTIGLRVPEHPIPLALMAELGEPLLSATLQLPGDDAPLNEAETIRARLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG AEP+TV+D+TG P ++R+G+G
Sbjct: 168 -LELVIDGGPAPAEPTTVIDLTGGEPALVREGRG 200
>gi|425448090|ref|ZP_18828070.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389731223|emb|CCI04707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 213
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD TG P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTGDQPDIVRQGLGWPELQQWL 213
>gi|398801272|ref|ZP_10560518.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. GM01]
gi|398092400|gb|EJL82814.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. GM01]
Length = 206
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + V+ L +G+V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +
Sbjct: 4 YFHIHPDNPQPRLVNQAVDYLNKGSVIVYPTDSGYALGCRLEEKNAMERICRIRQLDGNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLMCRDLSELSTY--------AQVDNSAFRILKNNTPGNYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ + A+L++++ P++STS+ ++ DP I + G +
Sbjct: 114 ------DKRKTIGLRVPSNPVALALLERLNEPMMSTSLMLPGNDFTESDPEEIQYSIG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +P+TV+D+T P ++R+G G
Sbjct: 167 LVDLIIDGGTLGQQPTTVIDLTSDAPVVVREGVG 200
>gi|425453530|ref|ZP_18833287.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389802068|emb|CCI18828.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 213
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V DG +E ST+VD TG P I+RQG G
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTGDQPDIVRQGLG 205
>gi|256822097|ref|YP_003146060.1| Sua5/YciO/YrdC/YwlC family protein [Kangiella koreensis DSM 16069]
gi|256795636|gb|ACV26292.1| Sua5/YciO/YrdC/YwlC family protein [Kangiella koreensis DSM 16069]
Length = 207
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 18/214 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + +V +++ G V V PTD+ YA+ C + A++R+R+I+++E
Sbjct: 5 IEIHPENPQPRLVSQIVAIIRNGGVVVYPTDSGYALGCHIGDKKALDRIRQIRDLEKDHN 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
+++CR L ++ Y R D FR +K+ PGPYTFIL A+ EVP +
Sbjct: 65 FTLVCRDLSELAFYA----RVDNTA----FRLIKNNTPGPYTFILRATAEVPNRL----- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV-DPVVIADTYGPE 181
K+ +K +G+R+P++AI QAIL+ + P+++TS+ +E V P I D
Sbjct: 112 ---KHPKKKTIGIRVPDNAISQAILEALGEPMMNTSLILPGQDEGEVLAPYEIFDELNGR 168
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + +TVVDMT YP+IIR G G
Sbjct: 169 -VDAVIDGGYCGHQETTVVDMTSGYPEIIRYGAG 201
>gi|150009964|ref|YP_001304707.1| hypothetical protein BDI_3382 [Parabacteroides distasonis ATCC
8503]
gi|255012773|ref|ZP_05284899.1| hypothetical protein B2_02632 [Bacteroides sp. 2_1_7]
gi|410102301|ref|ZP_11297228.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides sp. D25]
gi|423333635|ref|ZP_17311416.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides distasonis
CL03T12C09]
gi|149938388|gb|ABR45085.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|409227270|gb|EKN20170.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides distasonis
CL03T12C09]
gi|409239023|gb|EKN31811.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides sp. D25]
Length = 200
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 23/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V P + +++ VV++L++G + V PTDT+YAI CD + A+E++ ++K V P
Sbjct: 1 MLVRIYPENPNQKEIDKVVKVLQDGGLVVYPTDTVYAIGCDALNVRAVEKICQMKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + F+ +K LPGP+TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNAAFKLMKKHLPGPFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
Y RK VG+R+P++ I + ++Q + P+++ S++ KD E+ DP +I +
Sbjct: 109 ------IYKNRKEVGIRVPDNNITRTLVQSLGNPILTMSIRD-KDEVIEYTTDPELIHEK 161
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
Y + +D V+DGG E STV+D T +I+RQGKG
Sbjct: 162 YEHQ-VDIVIDGGFGGLEASTVIDCTTDNFEIVRQGKG 198
>gi|445498598|ref|ZP_21465453.1| Sua5/YciO/YrdC/YwlC family protein [Janthinobacterium sp. HH01]
gi|444788593|gb|ELX10141.1| Sua5/YciO/YrdC/YwlC family protein [Janthinobacterium sp. HH01]
Length = 207
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ +++ +G + VPTD+ YA+VC L +A+ERLRRI+ ++
Sbjct: 4 FFQVHPVNPQPRLIKQAAQIVHDGGIVAVPTDSCYALVCHLDDKAAVERLRRIRGIDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y R D + FR +K PGP+TFIL A+K VP++
Sbjct: 64 HLTLLCRDLSEIGVYA----RVDNRQ----FRLLKAATPGPFTFILEATKCVPRR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P DAI A+L+++ PL+ T++ +++ + D I + G +
Sbjct: 111 ---LSHPSRKTIGLRVPEDAIVHALLEELQQPLLGTTLIMPGEDDALNDADTICERLGKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+DGG EP+TV+D+TG+ +++RQG+G
Sbjct: 168 -IELVIDGGACSMEPTTVIDLTGSDAELVRQGRG 200
>gi|434384780|ref|YP_007095391.1| Sua5/YciO/YrdC/YwlC family protein [Chamaesiphon minutus PCC 6605]
gi|428015770|gb|AFY91864.1| Sua5/YciO/YrdC/YwlC family protein [Chamaesiphon minutus PCC 6605]
Length = 213
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 24/218 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P K++ +V LK GAV + PTDT+YAI CD+ S +A++R+R+IK + KPL
Sbjct: 6 EVHPQTPQLRKIDEIVAALKNGAVMLYPTDTVYAIGCDINSKAAVDRVRQIKRMSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC+SL +I Y +R +KH +PG YTFIL A+K VPK
Sbjct: 66 TFLCQSLSNISEYAIVSDPA--------YRLMKHLIPGTYTFILPATKLVPK-------- 109
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEW-----MVDPVVIADTY 178
+ RK G+R+P +CQ++L+ + P+IS S L+D++ +V+ V+ D
Sbjct: 110 IVQDPKRKTTGIRVPKQVLCQSLLENLGNPVISASAH-LQDDDGDESIEIVEKAVLFDRL 168
Query: 179 GPEGLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+ +D ++D G E ST++DMT P +IR+G G
Sbjct: 169 -EKMVDLIIDDGSEPGMEGSTILDMTIDPPDVIREGLG 205
>gi|386011003|ref|YP_005929280.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida BIRD-1]
gi|313497709|gb|ADR59075.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida BIRD-1]
Length = 209
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YA+ C + SAIER+RR++ ++ +
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSAYALGCQIGDKSAIERVRRLRGLDKTH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 64 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ AI A+L ++ PL+S S+ D+E M DP I +
Sbjct: 113 -----HDKRRTIGLRVPDHAITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 167 HVDLVIDGGFGDLKASTIIDLSGDEPELIREGCG 200
>gi|440231072|ref|YP_007344865.1| translation factor SUA5 [Serratia marcescens FGI94]
gi|440052777|gb|AGB82680.1| translation factor SUA5 [Serratia marcescens FGI94]
Length = 206
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVDVLRKGGVIVYPTDSGYALGCRLEEKSAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGHYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++ST++ ++ DP I+D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLEALNEPMMSTTLMLPGNDFAESDPEEISDHLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TVVD+T P+++R+G G
Sbjct: 172 IHGGFLGQQPTTVVDLTEDAPEVVREGAG 200
>gi|398802537|ref|ZP_10561744.1| Sua5/YciO/YrdC/YwlC family protein [Polaromonas sp. CF318]
gi|398099519|gb|EJL89778.1| Sua5/YciO/YrdC/YwlC family protein [Polaromonas sp. CF318]
Length = 211
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + L+ V LL+ G + VPTD+ YA+VC L +A + LRRI+ V+
Sbjct: 4 FFEVHPENPHTRLLKQAVALLERGGIAAVPTDSSYALVCHLDDKAAADSLRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + FR +K PGPYTFIL ASKEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNKQ----FRLLKAATPGPYTFILEASKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + QA+L+ APL++T++ E + D I E
Sbjct: 112 ----SHPSRKTIGLRVPEHKVLQALLELHGAPLLATTLIPRGGGEPLNDAHEIRGLLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
L V+D G E +TV+D+T G P ++RQG+G
Sbjct: 168 -LAAVIDAGACHQEATTVIDLTPMGEGGEPVVVRQGRG 204
>gi|301064000|ref|ZP_07204465.1| Sua5/YciO/YrdC/YwlC family protein [delta proteobacterium NaphS2]
gi|300441911|gb|EFK06211.1| Sua5/YciO/YrdC/YwlC family protein [delta proteobacterium NaphS2]
Length = 209
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 25/215 (11%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ ++ V E+L++G V PTDT Y I CDL + I+ + R+KN
Sbjct: 14 LFLSIHSDNPQQRHIDRVSEILEQGGVIAYPTDTFYGIGCDLYNKKGIQHIYRLKNRPLK 73
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L +I Y +A ++ +K LPGPYTFIL ++ VPK +
Sbjct: 74 KPFSFVCDGLNEISKYAL------VSNYA--YKTMKRLLPGPYTFILEGTRLVPKIML-- 123
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK VG+R+PN+ I +AI++ + P+ISTS + +P I D YG
Sbjct: 124 -------TKRKTVGIRVPNNNITRAIVRTLGRPIISTSAGF-------DEPRAIEDAYGV 169
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG+ PS+VV + P+IIR+GKG
Sbjct: 170 N-LDVIIDGGLLYPNPSSVVSLIDDEPEIIREGKG 203
>gi|407715999|ref|YP_006837279.1| translation factor YciO-like protein [Cycloclasticus sp. P1]
gi|407256335|gb|AFT66776.1| putative translation factor YciO-like protein [Cycloclasticus sp.
P1]
Length = 211
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+ P ++ ++++ G V PTD+ YA+ C L A++R+R+I+ ++
Sbjct: 4 YLNIHPDNPQPRLIKQAADIIRRGGVIAYPTDSSYALACHLGDKQALDRIRQIRRIDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I Y Q + + +R +K PG +TF+L A+KEVP++
Sbjct: 64 NFTLVCRDLTEISMY--------AQVNNDTYRLLKSLTPGAFTFVLKATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK VG+RIPN+ + Q IL++++ P++++++ + E + DP I
Sbjct: 112 ----QHPKRKTVGIRIPNNLVAQKILEELNEPMLTSTLILPGETEAIADPYEINQQLA-R 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VVD GV EP+T++ +P+++R+GKG
Sbjct: 167 VLDLVVDAGVIPYEPTTMIVWDNDFPEVVREGKG 200
>gi|365122930|ref|ZP_09339822.1| Sua5/YciO/YrdC/YwlC family protein [Tannerella sp. 6_1_58FAA_CT1]
gi|363641043|gb|EHL80456.1| Sua5/YciO/YrdC/YwlC family protein [Tannerella sp. 6_1_58FAA_CT1]
Length = 203
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 22/216 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSI 65
P + ++ VV +LKEG + V PTDT+YAI CD + A+ER+ R+K + P K LSI
Sbjct: 8 PENPNPKEINKVVNVLKEGGLIVYPTDTVYAIGCDALNVRAVERICRLKGINPQKVNLSI 67
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L +I Y + + F+ +K LPGP+TFIL +PK
Sbjct: 68 ICYDLSNISQY--------AKVNNEHFKLMKKNLPGPFTFILPTHSNLPK---------- 109
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLD 184
Y RK VG+R+P+++I + I+ +++ P+++TS++ + E+ DP +IA+ Y + +D
Sbjct: 110 IYKNRKTVGIRVPDNSIIREIVHQLENPVLTTSIRDEDEILEYTTDPELIAEKYEND-VD 168
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW 220
V++GG E ST+VD + I+R+GKG KL W
Sbjct: 169 IVINGGYGGIEASTIVDCSEDDAFIVREGKG-KLIW 203
>gi|87119434|ref|ZP_01075331.1| putative translation factor [Marinomonas sp. MED121]
gi|86164910|gb|EAQ66178.1| putative translation factor [Marinomonas sp. MED121]
Length = 206
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + ++++ G V V PTD Y++ C + SA++R+R+I+ ++
Sbjct: 4 FFQIHPENPQARLIRQATDIIRNGGVIVYPTDCGYSLGCHIGDKSALDRIRQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L +I TY R D + ++R +KH PGPYTFI A+ EVP++ +
Sbjct: 64 NFTLVCKDLSEISTYA----RFDNR----LYRLLKHHTPGPYTFIFGATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP + I QA+L ++ P++S+S+ + M+DP I DT +
Sbjct: 113 -----HPKRKTIGIRIPENKIVQALLDELGEPIMSSSLILPNETLPMMDPYDIRDTLQHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG EP+TV+ M I+RQG G
Sbjct: 168 -LDLVIDGGYCGMEPTTVIKMDLDDMAILRQGAG 200
>gi|148546653|ref|YP_001266755.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida F1]
gi|395447910|ref|YP_006388163.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida ND6]
gi|148510711|gb|ABQ77571.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida F1]
gi|388561907|gb|AFK71048.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida ND6]
Length = 221
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YA+ C + SAIER+RR++ ++ +
Sbjct: 16 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSAYALGCQIGDKSAIERVRRLRGLDKTH 75
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 76 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 124
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ AI A+L ++ PL+S S+ D+E M DP I + +
Sbjct: 125 -----HDKRRTIGLRVPDHAITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERLEHQ 179
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 180 -VDLVIDGGFGDLKASTIIDLSGDEPELIREGCG 212
>gi|307153963|ref|YP_003889347.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7822]
gi|306984191|gb|ADN16072.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7822]
Length = 217
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 22/214 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +++ +V+ LK GA+ + PTDT+YAI CD+ + SA+ER+R++K + KPL+ L
Sbjct: 9 PQTPQKRQIDQIVDALKRGAIMLYPTDTVYAIGCDMNTKSAVERVRKLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
SL +I Y + +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 SSSLSNISEYAVVTDQA--------YRIMKRLIPGPYTFLLPATKLVPKLVMSPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIADTYGPEG 182
RK G+R+P++ +CQAILQ + P+ISTS D+ ++ + D+
Sbjct: 116 ---RKTTGIRVPDNEVCQAILQTLGNPIISTSAHLPDDDGDFPTLGLEKARLFDSMD-SL 171
Query: 183 LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D GV E ST++D+T P I+R+G G
Sbjct: 172 VDIIIDTGVNPGFEVSTILDLTQDEPVIVREGLG 205
>gi|383757716|ref|YP_005436701.1| hypothetical protein RGE_18610 [Rubrivivax gelatinosus IL144]
gi|381378385|dbj|BAL95202.1| hypothetical protein RGE_18610 [Rubrivivax gelatinosus IL144]
Length = 207
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ E P L+ ELL+ G V VPTD+ YA+VC L +A E+LRR++ ++
Sbjct: 3 LRFEVHPDNPQPRLLKQAAELLRGGDVLAVPTDSSYALVCRLDDKAAAEQLRRLRGIDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HLLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILDATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R+ +G+R+P+ + Q +L PL++T++ D+E + D I D G
Sbjct: 112 -----SHPSRRTIGLRVPDHQVTQDLLAAYGEPLLATTLILPGDDEPLNDVDEIQDRLG- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G EP+TV+DMT P ++RQG+G
Sbjct: 166 KLLPAIIDAGACPMEPTTVLDMTAEDPVLLRQGRG 200
>gi|26991184|ref|NP_746609.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida KT2440]
gi|24986231|gb|AAN70073.1|AE016647_3 Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida KT2440]
Length = 221
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YA+ C + SAIER+RR++ ++ +
Sbjct: 16 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSAYALGCQIGDKSAIERVRRLRGLDKTH 75
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 76 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 124
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ AI A+L ++ PL+S S+ D+E M DP I +
Sbjct: 125 -----HDKRRTIGLRVPDHAITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERL-EH 178
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 179 HVDLVIDGGFGDLKASTIIDLSGDEPELIREGCG 212
>gi|16329324|ref|NP_440052.1| hypothetical protein sll0216 [Synechocystis sp. PCC 6803]
gi|383321065|ref|YP_005381918.1| hypothetical protein SYNGTI_0156 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324235|ref|YP_005385088.1| hypothetical protein SYNPCCP_0156 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490119|ref|YP_005407795.1| hypothetical protein SYNPCCN_0156 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435385|ref|YP_005650109.1| hypothetical protein SYNGTS_0156 [Synechocystis sp. PCC 6803]
gi|451813483|ref|YP_007449935.1| hypothetical protein MYO_11550 [Synechocystis sp. PCC 6803]
gi|1651805|dbj|BAA16732.1| sll0216 [Synechocystis sp. PCC 6803]
gi|339272417|dbj|BAK48904.1| hypothetical protein SYNGTS_0156 [Synechocystis sp. PCC 6803]
gi|359270384|dbj|BAL27903.1| hypothetical protein SYNGTI_0156 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273555|dbj|BAL31073.1| hypothetical protein SYNPCCN_0156 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276725|dbj|BAL34242.1| hypothetical protein SYNPCCP_0156 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779452|gb|AGF50421.1| hypothetical protein MYO_11550 [Synechocystis sp. PCC 6803]
Length = 210
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 19/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P +E + + L++GA+ + PTDT+YAI CDL +A++R+R++K + +K
Sbjct: 4 FYNLHPETPQQRTVEMICKSLRQGAIMLYPTDTVYAIGCDLNDKNAVQRVRQLKQLSNNK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL +I Y + +R ++ +PGPYTF+L A+K+VPK V
Sbjct: 64 PLTFLCSSLSNIAEYAV--------VADDAYRLMRKLIPGPYTFLLPATKQVPKLVVE-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEW-MVDPVVIADTYGP 180
RK G+R+P+ ICQ ILQ + P+ISTS +E+ M + + D +
Sbjct: 114 ------PKRKTTGIRVPDRPICQEILQSLGNPIISTSAHLPDQDEFVMAEKAKLFDLFD- 166
Query: 181 EGLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+ +D ++D + S+++D T PK++R+G G
Sbjct: 167 KLVDIIIDDDREPGYQTSSIIDFTDKEPKVVREGLG 202
>gi|88705951|ref|ZP_01103659.1| Sua5/YciO/YrdC/YwlC family protein [Congregibacter litoralis KT71]
gi|88699665|gb|EAQ96776.1| Sua5/YciO/YrdC/YwlC family protein [Congregibacter litoralis KT71]
Length = 208
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + ++++ G V V PTD+ YA+ C + A++R+RRI+ ++
Sbjct: 4 FFQIHPDNPQARLVRQAADIVRGGGVIVYPTDSAYALGCHIGDKGALDRIRRIRKLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D +++R +K PGPYTFIL A+ EVP++ ++
Sbjct: 64 NFTLVCRDLSEIATYA----RVDN----SVYRLLKQHTPGPYTFILRATTEVPRRLMQ-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK VG+R+P +AI QA+L + PL+S S+ D ++DP I + E
Sbjct: 114 ------AKRKTVGLRVPENAITQALLGDLGEPLMSVSLIMPGDELPLIDPYEIRELLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E +TVVD+ P ++R GKG
Sbjct: 168 -VDLVIDGGYCGMEATTVVDLADEEPMVLRAGKG 200
>gi|430809306|ref|ZP_19436421.1| putative translation factor (SUA5) [Cupriavidus sp. HMR-1]
gi|429498266|gb|EKZ96778.1| putative translation factor (SUA5) [Cupriavidus sp. HMR-1]
Length = 215
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P + ++ +++++G + +PTD+ YA+ C + +A+E+LRR++ ++
Sbjct: 3 QYFEIHPDNPQARLVKQAAQIVRQGGLIALPTDSSYALACQIDDKAAVEQLRRLREIDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 63 HHLTLMCSDLSELGN----FARVDNRQ----YRWIKGATPGPYVFILEATKEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +GVR+P I A++ ++ PLIS +++ D+ M DP I
Sbjct: 112 -----SHPARKTIGVRVPEHPIPLALVAELGQPLISATLQLPGDDAPMNDPAEIRARL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ LD V+DGG A+P+TV+D+T P ++R G+G
Sbjct: 166 KRLDLVIDGGSAPAQPTTVIDLTSGEPVLVRAGRG 200
>gi|308274797|emb|CBX31396.1| Uncharacterized protein yciO [uncultured Desulfobacterium sp.]
Length = 201
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + V+++LK+ V PTDT Y I CD+ + AIE++ +K E +
Sbjct: 1 MLIEINPVNPQKRLISKVIDILKKDGVIAYPTDTYYGIGCDIMNKKAIEKIYLLKQREKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
P S +C L++I Y + ++ +K LPGPYTF+L SK VPK +
Sbjct: 61 SPFSFMCSGLKNISDY--------AKVSNYAYKTMKRLLPGPYTFVLEGSKLVPKIML-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK G+R+PN+ IC A+++++ P+I+TS + D +P +I + Y
Sbjct: 111 -------TNRKTAGIRVPNNIICLALVEELGNPIITTSA-TMPDGTVFDNPSLIHEYYKT 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+DGG +PS+VV + P++IRQG G
Sbjct: 163 R-INLVIDGGPVPGQPSSVVSLINDIPEVIRQGIG 196
>gi|428218579|ref|YP_007103044.1| Sua5/YciO/YrdC/YwlC family protein [Pseudanabaena sp. PCC 7367]
gi|427990361|gb|AFY70616.1| Sua5/YciO/YrdC/YwlC family protein [Pseudanabaena sp. PCC 7367]
Length = 225
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 121/230 (52%), Gaps = 41/230 (17%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ +V L+ GAV + PTDT+YAI CD++S A+ER+R+IK +KPL+ L
Sbjct: 9 PENPQTRTIDAIVAELRRGAVMLYPTDTVYAIGCDMQSKRAVERVRQIKQFSNNKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y G + +R +K +PGPYTF+L +K VPK +
Sbjct: 69 CESLSNIAHY--------GHVSDSAYRIMKSLIPGPYTFVLPTTKLVPKIVMD------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDP--------------- 171
RK G+R+PN +C A+L+++ P+ISTS D + M D
Sbjct: 114 -PKRKTTGIRVPNHQVCLALLRQLGNPIISTSANLDADTDDMGDAIKMDKLKQKHKICAL 172
Query: 172 --VVIADTYGPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
V + D + + +D ++D G +EP STV+D+T P IIR+G G
Sbjct: 173 PQVELFDNFD-KLVDLIIDDG---SEPGDRVSTVLDLTSDEPVIIREGMG 218
>gi|119476916|ref|ZP_01617197.1| putative translation factor (SUA5) [marine gamma proteobacterium
HTCC2143]
gi|119449723|gb|EAW30960.1| putative translation factor (SUA5) [marine gamma proteobacterium
HTCC2143]
Length = 207
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P S + V++LK G V V PTD+ YAI C L + A++ +RR++ ++ S
Sbjct: 4 FFQIHPDNPQSRLINQAVDILKGGGVIVYPTDSGYAIGCQLGNKKALDTIRRVRKLDSSH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ +Y + +R +K+ PGPYTFIL A+ EVPK+ +
Sbjct: 64 NFTLVCRDLSELGSY--------AKVDNTAYRLLKNHTPGPYTFILKATSEVPKRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P + I +L ++ P++S ++ D+ M DP I T E
Sbjct: 113 -----HPKRRTIGLRVPENNIALQLLAGLNEPMMSVTMILPGDDLPMTDPYDIRQTLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG EP++V+D+ P IIR+G+G
Sbjct: 168 -LDLVIDGGYCGMEPTSVIDLVDDMPVIIRRGQG 200
>gi|404496457|ref|YP_006720563.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
metallireducens GS-15]
gi|418064817|ref|ZP_12702193.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter metallireducens RCH3]
gi|78194060|gb|ABB31827.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
metallireducens GS-15]
gi|373563090|gb|EHP89291.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter metallireducens RCH3]
Length = 203
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 20/222 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ +P + VV++LK+G + PTDT Y I C + S IER+ +K E
Sbjct: 1 MLLDINPQNPQPRLVAQVVKILKDGGIIAYPTDTTYGIGCSIFSKKGIERIYLLKQREKK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L ++ Y + ++ +K LPGPYTF+L A+ VP V
Sbjct: 61 KPFSFICSDLSEVARY--------AKVSNYAYKMLKRHLPGPYTFVLDATSIVPDLLV-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP++ IC ++++++ P+I+TS L E + DP ++ G
Sbjct: 111 -------TKQKTVGIRIPDNRICLSLVKELGHPIITTSAN-LSGEEPIGDPYLVDLNMGK 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ LD VVDGG+ A+ S+VV + G YP+++RQG G + W E
Sbjct: 163 Q-LDVVVDGGILSADVSSVVSLIGDYPQVLRQGVG-DVSWCE 202
>gi|406661371|ref|ZP_11069491.1| hypothetical protein B879_01504 [Cecembia lonarensis LW9]
gi|405554768|gb|EKB49840.1| hypothetical protein B879_01504 [Cecembia lonarensis LW9]
Length = 237
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 124/212 (58%), Gaps = 19/212 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSI 65
P + K++ +VE+L++G V + PTDT+Y + CD+ + A+ER+ +IK ++P K S
Sbjct: 38 PENPEMRKIQRIVEVLRDGGVIIYPTDTVYGMGCDIHNQRAVERIAQIKGIKPKKHNFSF 97
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L +I YT +F+ +K LPGPYTFIL A+ VPK
Sbjct: 98 ICYDLSNISEYTRAL-------STPVFKVMKKALPGPYTFILEANNAVPK---------I 141
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLD 184
S +K VG+R+P+ +I + +++++ +P+++TS+ + E+ DP +I + Y + +D
Sbjct: 142 LNSNKKTVGIRVPDHSIPRLLVKELGSPILTTSIHDEDEVVEYSTDPELIYEKYR-DLVD 200
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
V+DGG STV+D TG+ +++R+G GP
Sbjct: 201 VVIDGGYGNNVASTVLDCTGSEIELVREGLGP 232
>gi|256820827|ref|YP_003142106.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea DSM
7271]
gi|256582410|gb|ACU93545.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea DSM
7271]
Length = 206
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 120/201 (59%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLRRGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+P++ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 123 VPDNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G PK++R+GKG
Sbjct: 181 VASTVIDLSGDAPKVLREGKG 201
>gi|428775510|ref|YP_007167297.1| translation factor SUA5 [Halothece sp. PCC 7418]
gi|428689789|gb|AFZ43083.1| translation factor SUA5 [Halothece sp. PCC 7418]
Length = 223
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P LE V + LK+GAV + PTDT+YAI CD+ SA+E++R +K + KPL+ L
Sbjct: 9 PETPQQRTLETVAQALKDGAVMLYPTDTVYAIGCDMNVKSAVEKVRFLKRMSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y + + +R +K +PG YTF+L A+K VPK +
Sbjct: 69 CSSLSNIADY--------ARVDDDAYRLMKRLIPGTYTFLLPATKLVPKLVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV-----DPVVIADTYGPE 181
RK G+R+P+ +CQ++LQ + P+ISTS +L D+ + + + DT +
Sbjct: 114 -PKRKTSGIRVPDHIVCQSLLQTLGNPIISTSA-YLPDDTGELPTLGYEKARLFDTMD-K 170
Query: 182 GLDFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKG 215
+D ++D G V + ST++D+TG P+IIR+G G
Sbjct: 171 LVDLILDDGSEVRTDVSTIIDLTGDEPEIIREGLG 205
>gi|298374321|ref|ZP_06984279.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_19]
gi|298268689|gb|EFI10344.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 3_1_19]
Length = 200
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ P + +++ VV++L++G + V PTDT+YAI CD + A+E++ ++K V P
Sbjct: 1 MLVKIYPENPNQKEIDKVVKVLQDGGLVVYPTDTVYAIGCDALNVRAVEKICQMKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + F+ +K LPGP+TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNAAFKLMKKHLPGPFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
Y RK VG+R+P++ I + ++Q + P+++ S++ + E+ DP +I + Y
Sbjct: 109 ------IYKNRKEVGIRVPDNNITRTLVQSLGNPILTMSIRDEDEVIEYTTDPELIHEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E STV+D T +I+RQGKG
Sbjct: 163 EHQ-VDIVIDGGFGGLEASTVIDCTTDNFEIVRQGKG 198
>gi|172036646|ref|YP_001803147.1| putative Sua5/YciO/YrdC/YwlC [Cyanothece sp. ATCC 51142]
gi|171698100|gb|ACB51081.1| putative Sua5/YciO/YrdC/YwlC [Cyanothece sp. ATCC 51142]
Length = 221
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +++ + + L++GA+ + PTDT+YAI CDL S SA++R+R++K + KPL+ L
Sbjct: 13 PENPQPRRIDEICDSLRKGAIMLYPTDTVYAIGCDLNSKSAVQRVRQLKQLSNDKPLTFL 72
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 73 CSSLSNISEYAGVTDEA--------YRIMKRVIPGPYTFLLPATKAVPKLVMSPK----- 119
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-----VDPVVIADTYGPE 181
RK G+R+P+ ICQAIL +++ P+ISTS L D E ++ + D +
Sbjct: 120 ---RKTTGIRVPDHPICQAILTELNNPIISTSAH-LPDEEGEFPTIGLEKARLFDILESQ 175
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D + + ST++DMT P IIRQG G
Sbjct: 176 -VDMIIDNSLEPGFDVSTILDMTSDPPSIIRQGLG 209
>gi|410086012|ref|ZP_11282726.1| YciO family [Morganella morganii SC01]
gi|421494356|ref|ZP_15941705.1| hypothetical protein MU9_2876 [Morganella morganii subsp. morganii
KT]
gi|455739429|ref|YP_007505695.1| YciO family [Morganella morganii subsp. morganii KT]
gi|400191352|gb|EJO24499.1| hypothetical protein MU9_2876 [Morganella morganii subsp. morganii
KT]
gi|409767560|gb|EKN51636.1| YciO family [Morganella morganii SC01]
gi|455420992|gb|AGG31322.1| YciO family [Morganella morganii subsp. morganii KT]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+ +G V + PTD+ YAI C L+ A++R+ R++ ++ + +++
Sbjct: 9 PDNPQARLINQSVEIFNKGGVVIYPTDSGYAIGCRLEDKDALQRICRLRQIDSNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L DI TY +FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSDISTY--------AHVDNTVFRLIKNNTPGNYTFILRATKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+RIP + I +L M PL+S S+ ++ DP I DT G + +D V
Sbjct: 114 -EKRKTIGLRIPANPIAMDLLAAMGEPLMSASLILPGNDFAESDPEEINDTLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P ++R+G G
Sbjct: 172 IHGGYIGQQPTTVIDLTDDVPVVVREGTG 200
>gi|290475292|ref|YP_003468180.1| hypothetical protein XBJ1_2281 [Xenorhabdus bovienii SS-2004]
gi|289174613|emb|CBJ81407.1| Protein yciO [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S + V++LK+G V + PTD+ YAI C L++ A+ R+ RI+ ++ +++
Sbjct: 9 PDNPQSRLIGQSVDMLKKGGVVIYPTDSGYAIGCCLENKDAMTRICRIRQLDGRHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY D Q FR +K+ PG YTFIL A+K+VP++ +
Sbjct: 69 CRDLSEIATYA----HVDNQA----FRLIKNNTPGNYTFILQATKDVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ M PL+S S+ ++ DP I D G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPIALALLEGMREPLMSCSLILPGNDFAESDPEEIKDVLGKQ-VDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+TG P ++R+G+G
Sbjct: 172 IHGGYLGQQPTTVIDLTGDSPAVLREGEG 200
>gi|354554460|ref|ZP_08973764.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. ATCC 51472]
gi|353553269|gb|EHC22661.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. ATCC 51472]
Length = 217
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +++ + + L++GA+ + PTDT+YAI CDL S SA++R+R++K + KPL+ L
Sbjct: 9 PENPQPRRIDEICDSLRKGAIMLYPTDTVYAIGCDLNSKSAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAGVTDEA--------YRIMKRVIPGPYTFLLPATKAVPKLVMSPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-----VDPVVIADTYGPE 181
RK G+R+P+ ICQAIL +++ P+ISTS L D E ++ + D +
Sbjct: 116 ---RKTTGIRVPDHPICQAILTELNNPIISTSAH-LPDEEGEFPTIGLEKARLFDILESQ 171
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D + + ST++DMT P IIRQG G
Sbjct: 172 -VDMIIDNSLEPGFDVSTILDMTSDPPSIIRQGLG 205
>gi|254515167|ref|ZP_05127228.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium NOR5-3]
gi|219677410|gb|EED33775.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium NOR5-3]
Length = 208
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + ++++ G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPDNPQARLVRQAADIVRGGGVIVYPTDSAYALGCHIGDKAALDRIRRIRKLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D ++R +K PGPYTFIL A+ EVP++ ++
Sbjct: 64 NFTLVCRDLSEIATYA----RVDNV----VYRLLKQYTPGPYTFILKATTEVPRRLMQ-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S R+ +G+R+P++AI QA+L + PL+S S+ D ++DP I + E
Sbjct: 114 ------SKRRTIGLRVPDNAITQALLGDLGEPLMSVSLIMPGDELPLIDPYEIRELLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVDGG E +TVVD+ P ++R GKG
Sbjct: 168 -VDLVVDGGYCGMEATTVVDLADEKPMLLRAGKG 200
>gi|428320780|ref|YP_007118662.1| translation factor SUA5 [Oscillatoria nigro-viridis PCC 7112]
gi|428244460|gb|AFZ10246.1| translation factor SUA5 [Oscillatoria nigro-viridis PCC 7112]
Length = 220
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 34/226 (15%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++E + + LK+GAV + PTDT+YAI CDL S SA+ER+R+IK + KPL
Sbjct: 6 EVHPVAPQKDRIEKITKALKDGAVMLYPTDTVYAIGCDLNSKSAVERVRQIKQLSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PGPYTF+L A+K VP+ +
Sbjct: 66 TFLCSSLSNIAEYAVVTDEA--------YRIIKRLIPGPYTFLLPATKLVPRLVMN---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPV--VIADTYGPE 181
RK G+R+P+ +C +L+ + P+ISTS D+E PV A+++G
Sbjct: 114 ----PKRKTTGIRVPDQRLCFTLLESLGNPIISTSAHITTDDEGAA-PVSAAKAESFGKA 168
Query: 182 GL--------DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
L D +VD G ++P ST++D+T + P ++R+G G
Sbjct: 169 ELFDCLSKLVDVIVDDG---SDPGYQVSTILDLTESEPIVVRRGLG 211
>gi|374370908|ref|ZP_09628897.1| translation factor Sua [Cupriavidus basilensis OR16]
gi|373097465|gb|EHP38597.1| translation factor Sua [Cupriavidus basilensis OR16]
Length = 207
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P S ++ +++ +G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 YFEIHPLNPQSRLIKQAAQIIGQGGLIALPTDSSYALACRLDDKAAVERLRRLRGIDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCSDLSELGN----FARVDNRQ----YRWLKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P+ I A+L ++ PLIS +++ D + +P VI T +
Sbjct: 112 ----SHPARKTIGVRVPDHPIPLALLAEVGEPLISATLQLPGDEAPLNEPEVI-RTRLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+ GG A+P+TV+D+T P+++RQG+G
Sbjct: 167 LLELVICGGAAPAQPTTVIDLTAGEPELVRQGRG 200
>gi|94310010|ref|YP_583220.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34]
gi|93353862|gb|ABF07951.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34]
Length = 215
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P + ++ +++++G + +PTD+ YA+ C + +A+E+LRR++ ++
Sbjct: 3 QYFEIHPDNPQARLVKQAAQIVRQGGLIALPTDSSYALACQIDDKAAVEQLRRLREIDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 63 HHLTLMCSDLSELGN----FARVDNRQ----YRWIKGATPGPYVFILEATKEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +GVR+P I A++ ++ PLIS +++ D+ M DP I
Sbjct: 112 -----SHPARKTIGVRVPEHPIPLALVAELGQPLISATLQLPGDDAPMNDPAEIRARLE- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ LD V+DGG A+P+TV+D+T P ++R G+G
Sbjct: 166 KRLDLVIDGGPAPAQPTTVIDLTSGEPVLVRAGRG 200
>gi|428312544|ref|YP_007123521.1| Sua5/YciO/YrdC/YwlC family protein [Microcoleus sp. PCC 7113]
gi|428254156|gb|AFZ20115.1| Sua5/YciO/YrdC/YwlC family protein [Microcoleus sp. PCC 7113]
Length = 217
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 22/214 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E + E L+ GAV + PTDT+YAI CDL SA+ER+RR+K + KPL+ L
Sbjct: 9 PENPQIRRIEEIKEALQNGAVMLYPTDTVYAIGCDLNVKSAVERVRRLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL DI Y + +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CSSLSDIAQY--------AWVSDSSYRIMKSLIPGPYTFLLPATKLVPRLVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIADTYGPEG 182
R+ G+R+P+ +CQA+L+ + P+ISTS +N ++ + D +
Sbjct: 114 -PKRRTSGIRVPDHPVCQALLRALGNPIISTSAHLADENGKTPAVNLEQARLFDEFD-TL 171
Query: 183 LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D +VD G + + ST+VDM G P I+R+G G
Sbjct: 172 VDIIVDDGNKPGFQVSTIVDMIGEEPVIVRKGLG 205
>gi|390568811|ref|ZP_10249103.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia terrae BS001]
gi|420250120|ref|ZP_14753347.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. BT03]
gi|389939160|gb|EIN00997.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia terrae BS001]
gi|398062486|gb|EJL54260.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. BT03]
Length = 211
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 122/225 (54%), Gaps = 17/225 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P ++ ++++ G V +PTD+ YA+ C L + A++R+RRI+ ++ +
Sbjct: 4 YFRLHPDNPQPRLIKQAAQIIEGGGVVALPTDSSYALACQLDNKDAVDRVRRIRGLDDRQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSELANFALVDNRQ--------YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI AIL+++ PL+ +++ + + + DP I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLAILEELGEPLLGSTLILPGETQPLNDPEEIREKLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEEDA 226
LD V+DGG EPSTV+D+TG P ++R G+G + EE A
Sbjct: 168 -LDLVIDGGACPCEPSTVIDLTGEEPVLVRPGRGSLAPFGLEETA 211
>gi|71065086|ref|YP_263813.1| translation factor SUA5 [Psychrobacter arcticus 273-4]
gi|71038071|gb|AAZ18379.1| translation factor SUA5 [Psychrobacter arcticus 273-4]
Length = 207
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 19/208 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +E V LL++ + + PTDT YA C L + A+E+L+ I+ ++ ++L
Sbjct: 8 PENPQPRLIEQVANLLRKDQLIIYPTDTSYAFGCRLGAKDALEKLKHIRELDDKHQFTLL 67
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L +I Y N+ F+ +K P P TFIL A+K+VPKK
Sbjct: 68 CRDLSEIANYA---------AVDNVQFKQLKAHTPAPITFILNATKDVPKKLA------- 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
++ +K +G+R+P++AI QA+L+ MD P++++S+ + + DP I + G + +D
Sbjct: 112 -HAKKKTIGIRVPSNAIAQALLEAMDEPILTSSLILPNRDNILDDPFEIEELLGNQ-IDG 169
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQG 213
+++ G++ + +T+VDMT + P++IRQG
Sbjct: 170 LINAGIKTTKLTTIVDMTSSQPEVIRQG 197
>gi|332290736|ref|YP_004429345.1| Sua5/YciO/YrdC/YwlC family protein [Krokinobacter sp. 4H-3-7-5]
gi|332168822|gb|AEE18077.1| Sua5/YciO/YrdC/YwlC family protein [Krokinobacter sp. 4H-3-7-5]
Length = 205
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 25/215 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +P+ D L+ +V++LK G + + P+DT+YA+ CD+ + A+ER+ +IK V+ +K
Sbjct: 9 EENPNPRD---LQEIVKILKNGGLIIYPSDTVYALGCDITNTKALERVAQIKGVKLAKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L ++ Y Q F+ +K LPGPYTFIL + +P
Sbjct: 66 FSFVCEDLSNLSDYVK-------QIDTQTFKILKRALPGPYTFILPGNNNLP-------- 110
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGP 180
+ + +K VG+R+P++ I +AI++ + P+ISTS+ + +D E+ DP +I + +
Sbjct: 111 --SVFKKKKEVGIRVPDNEITRAIVRALGNPIISTSI-YDEDEVIEYTTDPELIFEKW-Q 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VDGG PSTV+D+TG P +IR+GKG
Sbjct: 167 NRVDVIVDGGYGGNIPSTVIDLTGDEPILIREGKG 201
>gi|334365848|ref|ZP_08514797.1| Sua5/YciO/YrdC/YwlC family protein [Alistipes sp. HGB5]
gi|313157954|gb|EFR57360.1| Sua5/YciO/YrdC/YwlC family protein [Alistipes sp. HGB5]
Length = 200
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 125/215 (58%), Gaps = 27/215 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +PS +L VV+ L++G + + PTD++YA C L+S AIERLRR+K + ++
Sbjct: 7 EQNPS---ERELRKVVDALEDGGIIIYPTDSVYAFGCSLRSPKAIERLRRMKGKD-AEAF 62
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+++ +L Y R D F +K LPGP+TF+LTAS +P K +
Sbjct: 63 TVVFENLAQAAEYC----RVDNAA----FHILKRNLPGPFTFVLTASSGMPDKALEK--- 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGP 180
R+ +G+RIP +A+ + I+ + PLI+TSVK D+ E+ DP +I + YG
Sbjct: 112 ------RRTIGIRIPGNAVPRVIVAALGCPLITTSVK--DDDEVVEYTTDPELIHERYGR 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + V+DGGV P+TVVD+TG P+I+R+GKG
Sbjct: 164 D-VALVIDGGVGDNVPTTVVDLTGDEPEILREGKG 197
>gi|317048305|ref|YP_004115953.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. At-9b]
gi|316949922|gb|ADU69397.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. At-9b]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V+ L +G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +++CR L ++ TY+
Sbjct: 21 VDYLNKGGVIVYPTDSGYALGCRLEEKNAMERICRIRQLDGHHNFTLMCRDLSELSTYS- 79
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
Q + FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 80 -------QVDNSAFRIIKNNTPGSYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ + A+L+ ++ P++STS+ ++ DP I + G + +D ++DGG +P+T
Sbjct: 125 SNPVALALLEALNEPMMSTSLMLPGNDFTESDPEEIQHSIG-KLVDLIIDGGTLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
VVD+T P I+R+G G
Sbjct: 184 VVDLTSDAPIIVREGVG 200
>gi|332525339|ref|ZP_08401504.1| Sua5/YciO/YrdC/YwlC [Rubrivivax benzoatilyticus JA2]
gi|332108613|gb|EGJ09837.1| Sua5/YciO/YrdC/YwlC [Rubrivivax benzoatilyticus JA2]
Length = 207
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ E P L+ ELL+ G V VPTD+ YA+VC L +A E+LRR++ ++
Sbjct: 3 LRFEVHPDNPQPRLLKQAAELLRGGDVLAVPTDSSYALVCRLDDKAAAEQLRRLRGIDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HLLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILDATKEVPRR---- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R+ +G+R+P+ + Q +L PL++T++ D+E + D I D G
Sbjct: 111 ----VSHPSRRTIGLRVPDHQVTQDLLAVYGEPLLATTLILPGDDEPLNDVDEIQDRLG- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G EP+TV+DMT P ++RQG+G
Sbjct: 166 KLLPAIIDAGACPMEPTTVLDMTAEDPVLVRQGRG 200
>gi|256838758|ref|ZP_05544268.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262382729|ref|ZP_06075866.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 2_1_33B]
gi|301307849|ref|ZP_07213805.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 20_3]
gi|423339642|ref|ZP_17317382.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides distasonis
CL09T03C24]
gi|256739677|gb|EEU53001.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262295607|gb|EEY83538.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 2_1_33B]
gi|300834192|gb|EFK64806.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides sp. 20_3]
gi|409230034|gb|EKN22904.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides distasonis
CL09T03C24]
Length = 200
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V P + +++ VV++L++G + V PTDT+YAI CD + A+E++ ++K V P
Sbjct: 1 MLVRIYPENPNQKEIDKVVKVLQDGGLVVYPTDTVYAIGCDALNVRAVEKICQMKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + F+ +K LPGP+TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNAAFKLMKKHLPGPFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
Y RK VG+R+P++ I + ++Q + P+++ S++ + E+ DP +I + Y
Sbjct: 109 ------IYKNRKEVGIRVPDNNITRTLVQSLGNPILTMSIRDEDEVIEYTTDPELIHEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E STV+D T +I+RQGKG
Sbjct: 163 EHQ-VDIVIDGGFGGLEASTVIDCTTDNFEIVRQGKG 198
>gi|167035000|ref|YP_001670231.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida GB-1]
gi|166861488|gb|ABY99895.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida GB-1]
Length = 221
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ +
Sbjct: 16 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSAYALGCQMGDKNAIERVRRLRGLDKTH 75
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 76 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 124
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I A+L ++ PL+S S+ D+E M DP I +
Sbjct: 125 -----HDKRRTIGLRVPNHVITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERL-EH 178
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 179 HVDLVIDGGFGDLKASTIIDLSGDEPELIREGCG 212
>gi|188533748|ref|YP_001907545.1| hypothetical protein ETA_16060 [Erwinia tasmaniensis Et1/99]
gi|188028790|emb|CAO96652.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 206
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE+L +G+V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQPRLIKQAVEMLNKGSVIVYPTDSGYALGCKLEDKNALERICRIRKLDGNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNTAFRLIKNNTPGNYTFILKATKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ ++ P++STS+ ++ DP I D G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPIALALLEALNEPMMSTSLILPGNDFTESDPEAIQDELG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P+++R+G G
Sbjct: 172 IHGGYLGQQPTTVIDLTEDAPEVVREGVG 200
>gi|381401428|ref|ZP_09926331.1| hypothetical protein KKB_06038 [Kingella kingae PYKK081]
gi|380833578|gb|EIC13443.1| hypothetical protein KKB_06038 [Kingella kingae PYKK081]
Length = 206
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 18/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ E++++G V V+PTD+ Y +VC L +A+ER+ I+ ++ L++L
Sbjct: 9 PDNPQERLIKQACEIVRQGGVAVLPTDSCYVLVCQLGDKTAMERILSIRKIDLKHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY + + FR +K PG YTFIL ASKEVP + +
Sbjct: 69 CADLSELGTY--------AKVDNSQFRQLKMTTPGAYTFILPASKEVPNRTL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P++AI +L+++ PL+S ++ +D+E + DP I + +D V
Sbjct: 113 HPKRKTIGLRVPDNAIALVLLRELGEPLLSCTLMLPEDDEPLSDPYEIRERL-EHSVDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG EP+TV+DMT +++RQGKG
Sbjct: 172 IDGGWCGTEPTTVIDMTDGM-ELVRQGKG 199
>gi|254412598|ref|ZP_05026371.1| Sua5/YciO/YrdC/YwlC family protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180333|gb|EDX75324.1| Sua5/YciO/YrdC/YwlC family protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 221
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 28/210 (13%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
++E + + L++GAV + PTDT+YAI CDL SA+ER+RR+K + KPL+ LC SL +I
Sbjct: 16 RIEKIRDNLQDGAVMLYPTDTVYAIGCDLNVKSAVERVRRLKQLSNEKPLTFLCSSLSNI 75
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y +R +K +PGPYTF+L A+K VP+ + RK
Sbjct: 76 SEY--------AWVSDPAYRIMKRLIPGPYTFLLPATKLVPRLVMS--------PKRKTS 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVV------IADTYGPEGL-DFV 186
G+R+P+ +CQAIL+ + P+ISTS +E P V + D + EGL D +
Sbjct: 120 GIRVPDHPVCQAILEALGNPVISTSAHL--PDEMGNFPTVGLETARLFDQF--EGLVDII 175
Query: 187 VDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
VD G + + ST++DMTG P I+R+G G
Sbjct: 176 VDDGSKPGVQVSTILDMTGDEPTILRKGLG 205
>gi|429214686|ref|ZP_19205849.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
protein [Pseudomonas sp. M1]
gi|428154972|gb|EKX01522.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
protein [Pseudomonas sp. M1]
Length = 209
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V PTD+ YA+ C L A+ER+RR++ ++
Sbjct: 4 FFQVHPENPQPRLIKQAVEIVRQGGVIAYPTDSSYALGCRLGEKGAVERIRRLRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGLYA--------KVDTRLFRLLKAHTPGPYTFILDATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+LQ++ PL+S S+ + E M DP + +
Sbjct: 113 -----HPKRRTIGLRVPACPIAQALLQELGEPLMSVSLIMPGETEPMSDPYEMRGALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E STV+++TG P++IR G G
Sbjct: 168 -VDLVLDGGYGGVEASTVINLTGEEPEVIRVGCG 200
>gi|374597134|ref|ZP_09670138.1| Sua5/YciO/YrdC/YwlC family protein [Gillisia limnaea DSM 15749]
gi|373871773|gb|EHQ03771.1| Sua5/YciO/YrdC/YwlC family protein [Gillisia limnaea DSM 15749]
Length = 206
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 23/214 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +P+ D ++ VV++L++G + + PTDT+Y + CD+ + SA+ER+ IK V+ K
Sbjct: 9 EENPNPKD---IKKVVDVLRKGGLVIYPTDTVYGLGCDITNTSALERIALIKQVKLDKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L ++ Y Q F+ +K LPGPYTFIL + +P
Sbjct: 66 FSFICEDLSNLSDYVK-------QIDTQTFKILKRNLPGPYTFILPGNNNLPN------- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPE 181
+ +K VG+R+P++ IC+AI++++ P++STS++ + E+ DP +I + + +
Sbjct: 112 ---VFKKKKTVGIRVPDNNICRAIVRELGNPIVSTSIRDEDEVIEYTTDPELIHEKWD-K 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PSTV+D+T P+++R+GKG
Sbjct: 168 LVDIVIDGGYGDNIPSTVIDLTNAQPEVLREGKG 201
>gi|399912422|ref|ZP_10780736.1| translation factor [Halomonas sp. KM-1]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V PTD+ YA+ C L A+ER++R+++++
Sbjct: 4 FFQIHPENPQKRLIDQAVEIVRQGGVVAYPTDSGYALGCHLGDKKAVERIKRLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L DI TY + ++FR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSDIGTY--------AKVDNSVFRLLKANTPGAYTFILNATSEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L+ + PL+S ++ + + M DP I D Y +
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLEALGEPLMSVTLIPVGEELPMTDPEEIRDRYMNQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG EP++V+D+ P I+R+G+G
Sbjct: 168 -LDLIIDGGACHLEPTSVIDLRELPPTILREGRG 200
>gi|118580209|ref|YP_901459.1| Sua5/YciO/YrdC/YwlC family protein [Pelobacter propionicus DSM
2379]
gi|118502919|gb|ABK99401.1| translation factor SUA5 [Pelobacter propionicus DSM 2379]
Length = 202
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 118/220 (53%), Gaps = 20/220 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E P + VV+ L+ G + PTDT Y I C + + IER+ R+K E
Sbjct: 1 MLLEIHPEHPQQRLIARVVDCLRNGGIIAYPTDTTYGIGCSIFNKKGIERIYRMKQREHK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C +L ++ + + F+ +K LPGPYTF+L A+++VP +
Sbjct: 61 KPFSFICPNLSEVARF--------ARVSNTAFKILKRYLPGPYTFVLEATRDVPDLLL-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP++ IC I+Q + +P+++TS L +E +P I + +G
Sbjct: 111 -------TRQKTVGIRIPDNRICLEIVQMLGSPIVTTSAN-LSGDEPTGNPGFIDEIFGH 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW 220
+ LD VVDGG+ E S+VV++ P+IIR G G L W
Sbjct: 163 Q-LDIVVDGGILTKEVSSVVNLVNDTPEIIRAGMG-DLSW 200
>gi|126660837|ref|ZP_01731931.1| hypothetical protein CY0110_27268 [Cyanothece sp. CCY0110]
gi|126617888|gb|EAZ88663.1| hypothetical protein CY0110_27268 [Cyanothece sp. CCY0110]
Length = 217
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 24/215 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P +++ + + L++GA+ + PTDT+YAI CDL S SA++R+R++K + KPL+ L
Sbjct: 9 PENPQPRRIDEICDSLRKGAIMLYPTDTVYAIGCDLNSKSAVQRVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNIADYAGVTDEA--------YRIMKRVIPGPYTFLLPATKAVPKLVMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-----VDPVVIADTYGPE 181
RK G+R+P+ ICQAIL +++ P+ISTS L D E ++ + D +
Sbjct: 114 -PKRKTTGIRVPDHPICQAILTELNNPIISTSAH-LPDEEGEFPTIGLEKARLFDILESQ 171
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D + + ST++DMT P IIRQG G
Sbjct: 172 -VDMIIDNSLEPGFDVSTILDMTSDPPSIIRQGLG 205
>gi|431930381|ref|YP_007243427.1| Sua5/YciO/YrdC/YwlC family protein [Thioflavicoccus mobilis 8321]
gi|431828684|gb|AGA89797.1| Sua5/YciO/YrdC/YwlC family protein [Thioflavicoccus mobilis 8321]
Length = 214
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 18/219 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P + VE+L G V + PTD+ YA+ C + SA+ER+RRI+ ++
Sbjct: 11 YFEVHPDNPQPRLVRRAVEILLGGGVIIYPTDSSYALGCQIGEKSAMERIRRIRRLDDKH 70
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I T + + D Q FR +K PGPYT I A+K+VP++ +
Sbjct: 71 NFTLVCRDLSEI----TAYAKIDNQA----FRLLKTLTPGPYTLIYQATKQVPRRLL--- 119
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ IC+A+L+ +D P++ST++ + + DP + + G
Sbjct: 120 -----HPKRKSIGIRVPDNEICRALLEALDQPILSTTLILPGADRPLTDPEEMREQLG-H 173
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLY 219
+D ++DGG EP+TVVDMT P ++R GKG P+L+
Sbjct: 174 CVDLIIDGGFCGLEPTTVVDMTQDVPVLLRVGKGDPRLF 212
>gi|115380236|ref|ZP_01467257.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
gi|310821629|ref|YP_003953987.1| sua5/ycio/yrdc/ywlc family protein [Stigmatella aurantiaca DW4/3-1]
gi|115362760|gb|EAU61974.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
gi|309394701|gb|ADO72160.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
Length = 203
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 23/215 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E D + VE+L G + PTDT Y + CDL S AIERL ++K + KP
Sbjct: 6 LEVDLHNPQPRHVSRAVEVLSRGGLVAYPTDTYYGLGCDLASKKAIERLYQLKGRDKKKP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS LC L D+ Y H + F R +K PG +TFIL A++ VP +
Sbjct: 66 LSFLCPDLSDVAKYA----------HVSNFAYRTMKGLTPGAFTFILEATRIVPDMMM-- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P+ + +A+ + PL++TS ++ E ++D I + G
Sbjct: 114 -------SRQKQVGIRVPDAPLARALAAGLGRPLVTTSASD-EEGEPLIDARDIKERLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLD ++DGGV + EPSTVV + G +I+RQGKG
Sbjct: 165 HGLDLILDGGVTLIEPSTVVSLIGDSIEILRQGKG 199
>gi|56460847|ref|YP_156128.1| Sua5 family translation factor [Idiomarina loihiensis L2TR]
gi|56179857|gb|AAV82579.1| Possible translation factor, Sua5/YciO/YrdC/YwlC family [Idiomarina
loihiensis L2TR]
Length = 207
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P + ++ V+++++ V V PTD+ YAI C + + +A +R+ +I+ ++
Sbjct: 4 YFEIHPENPQARLIQQSVQIIRKSGVVVYPTDSGYAIGCQIGNKAAADRICQIREIDKEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D + FR +K+ PGPYTFIL +KEVPK+ +
Sbjct: 64 NFTLMCRDLSELATYA----RVDN----DAFRLLKNNTPGPYTFILKGTKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P + I A+L++++ PL+STS+ + DP I D +
Sbjct: 114 ------PKRKTIGIRVPTNRIAMALLEELNEPLMSTSLILGQGMLAESDPEEIRDKL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG + EP+TVVD++ P I R+G G
Sbjct: 167 LVDLIIDGGHKGEEPTTVVDLSEGAPTIRREGSG 200
>gi|346225965|ref|ZP_08847107.1| Sua5/YciO/YrdC/YwlC family protein [Anaerophaga thermohalophila DSM
12881]
Length = 205
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 20/218 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + ++E VV++L++G + + PTDT+Y + CD+ A+E++ RIK + P
Sbjct: 1 MLIKIYPENPNPREVEKVVDILRDGGIVIYPTDTVYGLGCDINHSKALEKIARIKGINPR 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L + YT + F+ +K LPGP+TFIL AS VPK
Sbjct: 61 KDHLSIICHDLSHLSDYTKPL-------DSTTFKLIKKNLPGPFTFILPASNNVPKFF-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
S +K +G+RIP++ I I++++ P+++TS+K D E+ DP +I + Y
Sbjct: 112 -------KSNKKTIGLRIPDNPIITEIVRQLGNPILNTSIKDEDDVLEYTTDPELIHEKY 164
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+ +D V+DGG ST+VD T G +IIR+GKG
Sbjct: 165 K-DVVDAVIDGGYGDNVASTIVDCTNGPDFEIIREGKG 201
>gi|443658857|ref|ZP_21132217.1| yrdC domain protein [Microcystis aeruginosa DIANCHI905]
gi|159027852|emb|CAO87065.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332829|gb|ELS47416.1| yrdC domain protein [Microcystis aeruginosa DIANCHI905]
Length = 213
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD V
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETARLFDALDHV 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPDIVRQGLGWPELQQWL 213
>gi|408418912|ref|YP_006760326.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacula toluolica Tol2]
gi|405106125|emb|CCK79622.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacula toluolica Tol2]
Length = 202
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ +P ++ VV+++K+G + PTDT Y I CD+ + AIE++ IK +
Sbjct: 1 MLLKINPDNPQERQISRVVDIIKKGGIIAYPTDTFYGIGCDIMNKKAIEKIYTIKQRNKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L+DI Y + +R +K LPGPYTF+L+ SK VPK +
Sbjct: 61 KPFSFICPDLKDISKY--------AKVSNFAYRNMKRLLPGPYTFVLSGSKLVPKIML-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R+ G+R+P++ I A+ ++ P+ISTS D + DP ++ D Y
Sbjct: 111 -------TKRRTAGIRVPDNKIALALANELGHPIISTSATR-PDGKVFDDPSLLHD-YFA 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PS+V+ + P+IIR G G
Sbjct: 162 TTIDIVIDGGSVPGSPSSVISLIDDVPEIIRYGAG 196
>gi|383450378|ref|YP_005357099.1| putative translation factor [Flavobacterium indicum GPTSA100-9]
gi|380502000|emb|CCG53042.1| Putative translation factor [Flavobacterium indicum GPTSA100-9]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 23/214 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E PS A ++ VVE+L+ G + + PTDT+Y I CD+ + A+ERL ++K+++ K
Sbjct: 9 EDKPSEA---AIKKVVEVLRNGGLVIYPTDTVYGIGCDITNSRALERLAKLKDIKLEKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C SL ++ Y Q + F+ +K LPGPYTFIL + ++PK
Sbjct: 66 FSFVCSSLSNLSDYVR-------QIDTSTFKILKRALPGPYTFILPGNNDLPK------- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPE 181
++ +K VG+R+P++ I + I++ + P++S+S+ + E+ DP +I + + +
Sbjct: 112 ---EFRKKKTVGIRVPDNNIARQIVEVLGNPIVSSSIHDEDEVIEYSTDPELIFEKWQNK 168
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PST++D+TG P ++R+GKG
Sbjct: 169 -VDLVIDGGYGENVPSTIIDLTGYEPVVVREGKG 201
>gi|119775262|ref|YP_928002.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella amazonensis SB2B]
gi|119767762|gb|ABM00333.1| translation factor SUA5 [Shewanella amazonensis SB2B]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ V +L+ G V V PTD+ YA+ C + +A+ER+ RI+ +E S++CR L +I
Sbjct: 17 IDQAVNILRSGGVIVYPTDSGYALGCLIGDKNAMERIVRIRQMEQDHHFSLMCRDLSEIA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY R + Q FR VKHC PGPYTFI A+KEVP++ + +K +G
Sbjct: 77 TYA----RVENQA----FRLVKHCTPGPYTFIFKATKEVPRRL--------QNDKKKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+ + PL+STS+ DP I D + ++ +++GG
Sbjct: 121 IRVPDNVIALALLEALGEPLMSTSLVMPGQEFAESDPEHIRDLLEHQ-VEAILNGGYLGE 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
P+TVVDM+ +++R+G G
Sbjct: 180 SPTTVVDMSEDTFEVLREGAG 200
>gi|260220460|emb|CBA28020.1| Uncharacterized protein HI1198 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 207
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y + P L+ + LL++G + VPTD+ YA+VC L +A ++LR I+ V+
Sbjct: 3 QYFDVHPDNPQPRLLKQAIALLEKGGILAVPTDSSYALVCHLDDKAAADKLRSIRGVDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PG YTFIL ASKEVP++
Sbjct: 63 HHLTLLCRDLSELANYA----RVDNRQ----YRLLKAATPGAYTFILEASKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P + Q +L + L++T++ ++E + D I + Y
Sbjct: 112 -----SHPSRKTIGLRVPEHQVLQELLAHYGSALLATTLIAKGESEPLNDAQDIRERYEH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + V+D G EP+TV+D+TG P++IRQG G
Sbjct: 167 Q-IAAVIDAGACALEPTTVIDLTGEEPELIRQGGG 200
>gi|428202317|ref|YP_007080906.1| Sua5/YciO/YrdC/YwlC family protein [Pleurocapsa sp. PCC 7327]
gi|427979749|gb|AFY77349.1| Sua5/YciO/YrdC/YwlC family protein [Pleurocapsa sp. PCC 7327]
Length = 217
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 118/223 (52%), Gaps = 26/223 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + L+ G+V + PTDT+YAI CDL S SA+ER+R++K + KPL+ L
Sbjct: 9 PQNPQQRTIDEICNALRRGSVMLYPTDTVYAIGCDLNSKSAVERVRQLKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y + +R +KH +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAI--------VSDSAYRIMKHLIPGPYTFLLPATKLVPKLVMNPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ A+CQAILQ + P+IS+S L D E + + + LD
Sbjct: 116 ---RKTTGIRVPDHAVCQAILQTLGNPIISSSAH-LPDEEGEFPTLKLEKAKLFDALDKS 171
Query: 187 VDGGVRV-----AEPSTVVDMTGTYPKIIRQGKGPKLYWMEEE 224
VD + E ST++D+T P ++R+G G W E E
Sbjct: 172 VDIIIDDDSDPGVEVSTILDLTEEEPVVVRKGLG----WEEVE 210
>gi|393780310|ref|ZP_10368528.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|392608782|gb|EIW91620.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
412 str. F0487]
Length = 206
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 121/204 (59%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDI 73
+ VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++
Sbjct: 17 ISKVVEVLRCGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNL 76
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y Q + F+ +K LPGPYTFI+ + +PK + +K V
Sbjct: 77 SDYVK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTV 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 120 GIRVPDNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++G PK++R+GKG
Sbjct: 178 GDNVASTVIDLSGDAPKVLREGKG 201
>gi|373457777|ref|ZP_09549544.1| Sua5/YciO/YrdC/YwlC family protein [Caldithrix abyssi DSM 13497]
gi|371719441|gb|EHO41212.1| Sua5/YciO/YrdC/YwlC family protein [Caldithrix abyssi DSM 13497]
Length = 206
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 19/196 (9%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E+L +G + V PTDT+Y + DL + AIER+ RIK K LS + L++I +
Sbjct: 23 EILSQGGIVVYPTDTIYGLGIDLFNKKAIERVLRIKKESKHKMLSFILPDLKNIAEWAL- 81
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
P ++ ++ +PGPYTFIL A+K+VPK + S +K VG+RIP+
Sbjct: 82 VPD-------YAYKIMRRVVPGPYTFILKATKKVPKLLL---------SNQKTVGIRIPD 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
+ QA++Q++ P++STSV D + DP+ IA Y E +D ++D GV V +PST+
Sbjct: 126 SIVAQALVQELGRPILSTSVPQGSDG-FYTDPLEIARCYQHE-IDLILDAGVMVNKPSTI 183
Query: 200 VDMTGTYPKIIRQGKG 215
VD +G P+I+R+G G
Sbjct: 184 VDFSGPEPEILREGSG 199
>gi|302344113|ref|YP_003808642.1| Sua5/YciO/YrdC/YwlC family protein [Desulfarculus baarsii DSM 2075]
gi|301640726|gb|ADK86048.1| Sua5/YciO/YrdC/YwlC family protein [Desulfarculus baarsii DSM 2075]
Length = 203
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E DP K+ V L+EG V PTDT Y + CD+ S A+ RL +IK S
Sbjct: 1 MIIEIDPQRIQPRKIAQVTAALREGGVVAYPTDTSYGLGCDIFSQKALRRLHQIKAQPES 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANI----FRAVKHCLPGPYTFILTASKEVPKK 116
KP S +C L+D+ TY AN+ ++ ++ LPGPYTF+L S+ PK
Sbjct: 61 KPFSFICPDLKDLSTY------------ANVTNYAYKTLRRLLPGPYTFVLEGSRHAPKM 108
Query: 117 CVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD 176
+ + RK VG+R+P+ +C AI+Q++ P+ ST+ + P I
Sbjct: 109 VL---------TKRKTVGIRVPDHPVCLAIVQELGHPIASTTA-MDGQGRALNTPWEIES 158
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
G LD VVDGG S+V+ + G P+IIR+G G
Sbjct: 159 ELG-HALDLVVDGGPAPGLLSSVIGLIGDEPQIIREGAG 196
>gi|325287671|ref|YP_004263461.1| Sua5/YciO/YrdC/YwlC family protein [Cellulophaga lytica DSM 7489]
gi|324323125|gb|ADY30590.1| Sua5/YciO/YrdC/YwlC family protein [Cellulophaga lytica DSM 7489]
Length = 206
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 124/216 (57%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P ++ ++ VV++LK+G + + PTDT+Y + CD+ + A+E++ RIK V+ +K
Sbjct: 4 FIKIYPENPNADAIKKVVDVLKKGGLVIYPTDTVYGLGCDITNTKALEKIARIKGVKLAK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFICADLSNLSEYVK-------QIDTATFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYG 179
+ +K VG+R+P+++I A++Q + P++STS++ + E+ DP +I + +
Sbjct: 112 -----DFKKKKTVGIRVPDNSIANAMVQALGNPIVSTSIRDEDELLEYTTDPELIYEKWD 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STVVD++ P+IIR+GKG
Sbjct: 167 -NLVDIVIDGGYGDNTASTVVDLSDGEPEIIREGKG 201
>gi|289208889|ref|YP_003460955.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalivibrio sp. K90mix]
gi|288944520|gb|ADC72219.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalivibrio sp. K90mix]
Length = 204
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 121/206 (58%), Gaps = 18/206 (8%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYT 77
V++ L EG V +PTD YA+ C + +R+RRI+ V+ + L++LCR L ++ Y
Sbjct: 17 VLDRLHEGTVIAIPTDACYALACLPGDKAGADRIRRIRQVDETHHLTLLCRDLSELGVY- 75
Query: 78 TGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRI 137
+ FR +K PGPYTFIL A++EVP++ ++ R+ +G+R+
Sbjct: 76 -------AKVDNTAFRLMKGLTPGPYTFILPATREVPRRL--------QHPKRRTIGLRV 120
Query: 138 PNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPS 197
P+ I A+L+++ +PL++ +++ ++ + +P VI D + +D VVDGG EP+
Sbjct: 121 PDSRIVSALLEELGSPLMTATLQLPGEDLPLSEPWVI-DERLSKVVDEVVDGGAGTLEPT 179
Query: 198 TVVDMTGTYPKIIRQGKGPKLYWMEE 223
+V+D+TG P+IIR G G + ++EE
Sbjct: 180 SVIDLTGDVPEIIRHGVG-DVAFLEE 204
>gi|425435962|ref|ZP_18816405.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389679409|emb|CCH91799.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 213
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTADQPDIVRQGLGWPELQQWL 213
>gi|298370013|ref|ZP_06981329.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. oral taxon 014
str. F0314]
gi|298281473|gb|EFI22962.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. oral taxon 014
str. F0314]
Length = 242
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 20/220 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 40 FFAIHPDNPQERLVKQAADIIRNGGVVVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 99
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C LR++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 100 HLTLMCADLRELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 148
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 149 -----HPKRKTIGLRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 202
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKGPKLYW 220
+D V+DGG EP+TV+DMT GT +IR+GKG K +
Sbjct: 203 AVDLVIDGGWCGTEPTTVIDMTDGTV--LIREGKGDKALF 240
>gi|443320004|ref|ZP_21049138.1| Sua5/YciO/YrdC/YwlC family protein [Gloeocapsa sp. PCC 73106]
gi|442790280|gb|ELR99879.1| Sua5/YciO/YrdC/YwlC family protein [Gloeocapsa sp. PCC 73106]
Length = 215
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 23/206 (11%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
++ + LK+GAV + PTDT+YAI CDL+S SAI+R+R IK + KPL+ C SL +I
Sbjct: 16 RIAEISNALKDGAVMLYPTDTVYAIGCDLQSKSAIKRVREIKQLSNDKPLTFCCSSLSNI 75
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + +R +KH +PGPYTF+L A+K VPK + RK
Sbjct: 76 SEYALVTDQA--------YRIMKHLIPGPYTFLLPATKLVPKLVMNPK--------RKTS 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRV 193
G+R+P+ ICQA+L +D P+ISTS L D + + + + LD +VD +
Sbjct: 120 GIRVPDHVICQALLSSLDNPIISTSAH-LPDIDGKLPTLGREKIRLFDNLDNLVDMIIED 178
Query: 194 -----AEPSTVVDMT-GTYPKIIRQG 213
+E ST++D++ G PKI+RQG
Sbjct: 179 DSESGSEFSTIIDLSDGEAPKIVRQG 204
>gi|86158113|ref|YP_464898.1| translation factor SUA5 [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774624|gb|ABC81461.1| translation factor SUA5 [Anaeromyxobacter dehalogenans 2CP-C]
Length = 231
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 116/220 (52%), Gaps = 19/220 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
VE DP +E V L G V PTDT Y I CDL AIER+ ++K + +
Sbjct: 31 VEIDPLHPQPRVIERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQLPRTHE 90
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ +C+ L +I Y +R ++ +PGP+TFIL A++ VP+ +R
Sbjct: 91 LAFICQDLAEISRYAI--------VDNAAYRVLRRKVPGPFTFILPATRLVPELVLRR-- 140
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+K VG+RIP+ I +++++ PLISTS D + ++D I + G G
Sbjct: 141 -------QKTVGIRIPDSPIALELVRRLGHPLISTSAAR-PDGDVLIDARDIKEELG-HG 191
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
LD ++D G R AEPS+V+D++G P ++R GKG ME
Sbjct: 192 LDLILDAGFRPAEPSSVIDLSGPEPVVVRVGKGDVSDLME 231
>gi|325274080|ref|ZP_08140224.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. TJI-51]
gi|324100791|gb|EGB98493.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. TJI-51]
Length = 201
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 116/203 (57%), Gaps = 17/203 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ + +++C + + Y
Sbjct: 13 VEIIRKGGVVVYPTDSAYALGCQIGDKAAIERVRRLRGLDKTHNFTLMCCDMSQLGLYA- 71
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K +PGPYTFIL ++EVP+ + + R+ +G+R+P
Sbjct: 72 -------KVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--------HEKRRTIGLRVP 116
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
+ AI A+L ++ PL+S S+ DNE M DP I + +D V+DGG + ST
Sbjct: 117 DHAITLALLAELGEPLMSVSLILPGDNEPMTDPYEIRERL-EHHVDLVIDGGYGDLKAST 175
Query: 199 VVDMTGTYPKIIRQGKGPKLYWM 221
++D++G P++IR+G G +M
Sbjct: 176 IIDLSGDEPELIREGCGDPAPFM 198
>gi|429746339|ref|ZP_19279693.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429166425|gb|EKY08410.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
380 str. F0488]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 119/201 (59%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLYRGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+P++ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 123 VPDNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G PK++R+GKG
Sbjct: 181 VASTVIDLSGDAPKVLREGKG 201
>gi|354597540|ref|ZP_09015557.1| Sua5/YciO/YrdC/YwlC family protein [Brenneria sp. EniD312]
gi|353675475|gb|EHD21508.1| Sua5/YciO/YrdC/YwlC family protein [Brenneria sp. EniD312]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ V+ L +G V V PTD+ YA+ C L +A+ER+ RI++++ + +++
Sbjct: 9 PQNPQPRLIKQAVDFLHKGGVIVYPTDSGYALGCMLGDKNAMERICRIRDLDNNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSTY--------AYVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I ++L +D PL+ST++ ++ DP I +T G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIALSLLAALDEPLMSTTLMLPGNDFAESDPEEIQETLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P+I+R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESTPQIVREGIG 200
>gi|407793759|ref|ZP_11140791.1| Sua5 family translation factor [Idiomarina xiamenensis 10-D-4]
gi|407214458|gb|EKE84306.1| Sua5 family translation factor [Idiomarina xiamenensis 10-D-4]
Length = 208
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P + ++ V ++++G V V PTD+ YAI C L A+ER+ +I++V+
Sbjct: 4 YFEIHPENPQARLIQQAVAIVRQGGVVVYPTDSGYAIGCQLGDKGAMERICQIRSVDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D N FR +K+ PG YTF+L +KEVP++ +
Sbjct: 64 NFTLMCRDLSELSTYA----RVDN----NAFRLLKNNTPGAYTFVLKGTKEVPRRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGP 180
RK +G+R+P + I A+L+ + PL+STS+ L NE+ DP I +
Sbjct: 114 ------PKRKTIGIRVPTNRIALALLEDLGEPLMSTSL-ILDGNEFAEADPFHIREVL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+ +D ++DGG R +P+TVVD+ +I+R GKG
Sbjct: 166 KRVDLIIDGGNRGEQPTTVVDLADDNQIRILRYGKG 201
>gi|149372161|ref|ZP_01891431.1| translation factor [unidentified eubacterium SCB49]
gi|149354928|gb|EDM43490.1| translation factor [unidentified eubacterium SCB49]
Length = 205
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 20/203 (9%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDI 73
++ VV ++K+G + + P+DT+YA+ CD+ + SA ERL ++K V+P K SI+C L ++
Sbjct: 17 IKRVVSIIKKGGLVIYPSDTVYALGCDVTNKSAYERLAKLKGVKPEKANFSIVCEDLSNL 76
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y Q F+ +K PGPYTFIL ++ + T + +K V
Sbjct: 77 SDYVK-------QIDGTTFKLLKRAFPGPYTFILPSNNNL----------TGYFKKKKEV 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGVR 192
G+R+P++ I QAI++++ P++STS+K + E+ DP +I + + + +D VVDGG
Sbjct: 120 GIRVPDNTITQAIIKELGNPIVSTSIKDEDEVLEYTTDPELIFEKW-EKLVDVVVDGGYG 178
Query: 193 VAEPSTVVDMTGTYPKIIRQGKG 215
ST++D+T P ++R+GKG
Sbjct: 179 DNVASTIIDITSGEPVLVREGKG 201
>gi|104782899|ref|YP_609397.1| hypothetical protein PSEEN3903 [Pseudomonas entomophila L48]
gi|95111886|emb|CAK16610.1| conserved hypothetical protein; Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas entomophila L48]
Length = 221
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ + ++LC L +
Sbjct: 29 IKQAVEIIRKGGVVVYPTDSAYAMGCQIGDKNAIERVRRLRQLDKNHNFTLLCCDLSQMG 88
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
T+ + FR +K +PGPYTFIL A++EVP+ + + R+ +G
Sbjct: 89 TF--------AKIDTATFRLLKAHIPGPYTFILNATREVPRLLM--------HEKRRTIG 132
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+++ PL+S S+ D E M DP I +D ++DGG
Sbjct: 133 LRVPSNPIVLALLEELGEPLMSVSLILPGDEEPMTDPYEIRQRL-EHHVDLIIDGGFGDL 191
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+ STV+D++G P +IR+G G
Sbjct: 192 KASTVIDLSGDEPALIREGCG 212
>gi|425442588|ref|ZP_18822830.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716313|emb|CCH99435.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 213
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPDIVRQGLGWPELQQWL 213
>gi|410938795|ref|ZP_11370635.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira noguchii str.
2006001870]
gi|410785996|gb|EKR74947.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira noguchii str.
2006001870]
Length = 202
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + KL+ + + L +G V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPEKRKLQQISDQLSQGKVYIFPTDTVYALVADSQSKPGVEKLYELKNISKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICSSISVASNYIEHLSN-------DAFRLMKKITPGPFTFITNANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +++ PL STSV ++E++++ + YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQELMKIHPNPLTSTSV--FANDEFIIEVDSLEKMYGS 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
++ +VDGG+ E ST++D+TG IIR+GKG +L
Sbjct: 165 R-VEGIVDGGILKVELSTILDLTGDEITIIREGKGFEL 201
>gi|409123539|ref|ZP_11222934.1| hypothetical protein GCBA3_08760 [Gillisia sp. CBA3202]
Length = 206
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 126/216 (58%), Gaps = 27/216 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +P+ D ++ VV++L++G + + PTDT+Y + CD+ + SA+ER+ +IK V+ K
Sbjct: 9 EENPNPKD---IKKVVDVLRKGGLIIYPTDTVYGLGCDITNTSALERIAQIKQVKLEKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L ++ Y Q + F+ +K LPGP+TFIL + +P
Sbjct: 66 FSFICEDLSNLSDYVK-------QIDSPTFKLLKRNLPGPFTFILPGNNNLPN------- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYG 179
+ +K VG+R+P++ IC+AI+ ++ P++STS+K D+ E+ DP +I + +
Sbjct: 112 ---VFKKKKTVGIRVPDNNICRAIVGELGNPIVSTSIK--DDDEVIEYTTDPELILEKWD 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STV+D+TG P+++R+GKG
Sbjct: 167 -NLVDLVIDGGYGDNVASTVIDLTGMEPEVVREGKG 201
>gi|83647680|ref|YP_436115.1| putative translation factor [Hahella chejuensis KCTC 2396]
gi|83635723|gb|ABC31690.1| putative translation factor (SUA5) [Hahella chejuensis KCTC 2396]
Length = 205
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 114/197 (57%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE++ G V V PTD+ YA+ C + +A +R++ I+ ++ +++CR L DI TY
Sbjct: 21 VEIIHSGGVIVYPTDSGYALGCAIGDKNAADRIKSIRRLDDKHNFTLVCRDLSDISTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ + +R +K+ PG YTFILTA+ EVP++ + + R+ +G+R+P
Sbjct: 79 ------AKVDNSTYRLLKNHTPGAYTFILTATSEVPRRLL--------HPKRRQIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I QA+L+++ APL+S+++ + M DP I +D ++DGG EP++
Sbjct: 125 DNRIAQALLEELGAPLMSSTLIMPGEEMPMTDPYEIRQML-EHAVDLIIDGGFCGMEPTS 183
Query: 199 VVDMTGTYPKIIRQGKG 215
VVD+T P I+R+G G
Sbjct: 184 VVDLTDDAPVILREGAG 200
>gi|291515798|emb|CBK65008.1| translation factor SUA5 [Alistipes shahii WAL 8301]
Length = 200
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 27/215 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +PS +L+ VV+ L+ + + PTD++YA C L+S AIERLRRI+ K
Sbjct: 7 EQNPS---EKELQRVVDALERDEIIIYPTDSVYAFGCSLRSPKAIERLRRIRGKSEEK-F 62
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+++ ++ + Y R D +FR +K LPGP+TF+L AS +P K +
Sbjct: 63 TVVFENIAQVAEYC----RVDNA----VFRILKRNLPGPFTFVLAASARIPDKAL----- 109
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGP 180
R+ +GVRIP + +A++ + P+I+TSVK D+ E+ DP +I + YG
Sbjct: 110 ----ERRRTIGVRIPASPVARAVVGALGCPMITTSVK--DDDQVVEYTTDPELIHERYGR 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E + V+DGG+ P+TVVD+TG P+I+R+GKG
Sbjct: 164 E-VALVIDGGIGDNVPTTVVDLTGDGPEILREGKG 197
>gi|425460417|ref|ZP_18839898.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826857|emb|CCI22279.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 213
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD V
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETPRLFDALDHV 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPDIVRQGLGWPELQQWL 213
>gi|331007378|ref|ZP_08330567.1| hypothetical protein IMCC1989_1396 [gamma proteobacterium IMCC1989]
gi|330418812|gb|EGG93289.1| hypothetical protein IMCC1989_1396 [gamma proteobacterium IMCC1989]
Length = 203
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 121/209 (57%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G + PTD+ YA+ C + A++R+R I+ ++ +++
Sbjct: 9 PENPQARFITRAVEIIRKGGLVAYPTDSAYALGCHIGDKFALDRIRGIRQLDKHHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + + +R +K+ PGP+TFIL A+ E P++ K
Sbjct: 69 CRDLSEIATY--------AKVNNQAYRMIKNFTPGPFTFILEATSETPRRL--------K 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P++ + A+L++++ P++++++ +++ + DP I +T + L+ V
Sbjct: 113 HPKRKTIGLRVPSNPVALALLEELNEPMMTSTLILPNESQPLTDPYDIRETLEHQ-LELV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG E +TVVDMTG P I+RQG G
Sbjct: 172 IDGGFCGMEATTVVDMTGDEPVIVRQGCG 200
>gi|425450638|ref|ZP_18830462.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389768436|emb|CCI06458.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 213
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETPRLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTADQPDIVRQGLGWPELQQWL 213
>gi|410029071|ref|ZP_11278907.1| Sua5/YciO/YrdC/YwlC family protein [Marinilabilia sp. AK2]
Length = 209
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 19/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + K++ +VE+LK+G V + PTDT+Y + CD+ + A+ER+ +IK ++P K
Sbjct: 5 FIKLYPENPEIRKIQRIVEILKDGGVIIYPTDTVYGMGCDIHNQRAVERIAQIKGIKPKK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I YT +F+ +K LPGPYTFIL A+ VPK
Sbjct: 65 HNFSFICYDLSNISEYTRAL-------STPVFKVMKKALPGPYTFILEANNAVPKIL--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
S +K VG+R+P+ +I + +++++ +P+++TS+ + E+ DP +I + Y
Sbjct: 115 ------NSNKKTVGIRVPDHSIPRLLVKELGSPILTTSIHDEDEVIEYSTDPELIFEKYR 168
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STV+D TG +++R+G G
Sbjct: 169 -DLVDVVIDGGYGNNVASTVLDCTGPEIELVREGLG 203
>gi|304310659|ref|YP_003810257.1| translation factor [gamma proteobacterium HdN1]
gi|301796392|emb|CBL44600.1| Putative translation factor (SUA5) [gamma proteobacterium HdN1]
Length = 211
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ V +L++G V V PTD YA C + + SA+ER+ +I+ + +I C +L ++
Sbjct: 17 IQQAVNILRDGGVIVYPTDAAYAFGCTVGNKSALERIVQIRQLGSKHNFTIACHNLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY R D Q +FR +K+ PGPYTFIL A+ EVP++ + + RK VG
Sbjct: 77 TYA----RVDNQ----VFRLLKNNTPGPYTFILAATAEVPRRLM--------HPKRKTVG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+RIP++ I A+L+ + PL++T++ ++E +VDP I + ++ V+DGG
Sbjct: 121 LRIPDNKIALALLEALGEPLMTTTLIMPNESEPLVDPEEILELLS-RRIELVIDGGWGET 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+TVVD+ + P ++R+GKG
Sbjct: 180 STTTVVDLVDSIPVLVREGKG 200
>gi|357406523|ref|YP_004918447.1| translation factor [Methylomicrobium alcaliphilum 20Z]
gi|351719188|emb|CCE24862.1| Conserved hypothetical protein, putative translation factor
[Methylomicrobium alcaliphilum 20Z]
Length = 216
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE+L+ G V P D+ YAI C + A++++RRI+ ++
Sbjct: 14 FFQIHPENPQQRLINRAVEILQHGGVIAYPNDSSYAIACQMDDKQALDKIRRIRQLDDKH 73
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L T + F + D +R +K PGP+TFIL A++EVP++
Sbjct: 74 NFTLICQDL----TQVSNFAKIDNDA----YRLIKALTPGPFTFILNATREVPRRL---- 121
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K +G+R+P+ AI +++ + PL S+++ ++ + DP I D E
Sbjct: 122 ----QHPKKKTIGIRVPDHAIASLLVETIGEPLFSSTLVMPGESSALSDPYEIRDRLEHE 177
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G+ EP+T+++ +G +IIRQGKG
Sbjct: 178 -LDLVIDAGIVPDEPTTIIECSGKNLEIIRQGKG 210
>gi|425472373|ref|ZP_18851224.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881564|emb|CCI37901.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 213
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLESARLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTCDQPDIVRQGLGWPELQQWL 213
>gi|152987724|ref|YP_001347308.1| hypothetical protein PSPA7_1927 [Pseudomonas aeruginosa PA7]
gi|150962882|gb|ABR84907.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 209
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGVY--------AKVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ +E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSSEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|254786472|ref|YP_003073901.1| Sua5/YciO/YrdC/YwlC family protein [Teredinibacter turnerae T7901]
gi|237685207|gb|ACR12471.1| Sua5/YciO/YrdC/YwlC family protein [Teredinibacter turnerae T7901]
Length = 224
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V++L+ G + V PTD+ YA+ C + A++R+R ++ ++
Sbjct: 22 FFSIHPENPQARLISQAVDILRRGGLIVYPTDSAYALGCHIGDKLALDRIRALRQLDKHH 81
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y R D +R +K PGP+TFIL A+ EVP++
Sbjct: 82 NFTLMCRDLSELANYA----RVDNTA----YRIIKSHTPGPFTFILNATSEVPRRL---- 129
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++AI A+L+++ PL+S+S+ D + DP I DT +
Sbjct: 130 ----QHPKRKTLGMRVPDNAIALALLEELGEPLMSSSLILPGDTLPLTDPYDIRDTLEHQ 185
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ V+DGG EP++V+D+TG P+++R+G G
Sbjct: 186 -CELVIDGGFCGLEPTSVIDLTGDEPQVMREGCG 218
>gi|440754028|ref|ZP_20933230.1| yrdC domain protein [Microcystis aeruginosa TAIHU98]
gi|440174234|gb|ELP53603.1| yrdC domain protein [Microcystis aeruginosa TAIHU98]
Length = 213
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ IL+ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTILETLENPIISSSAH-LPDQEGDFPTKGLETPRLFDALDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPDIVRQGLGWPELQQWL 213
>gi|390441885|ref|ZP_10229913.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389834783|emb|CCI34039.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 213
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ I++ ++ P+IS+S L D E + + LD V
Sbjct: 114 -PKRKTTGIRVPDHVICRTIIETLENPIISSSAH-LPDEEGDFPTKGLETPRLFDALDHV 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P+I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPEIVRQGLGWPELQQWL 213
>gi|421749294|ref|ZP_16186754.1| translation factor Sua [Cupriavidus necator HPC(L)]
gi|409771862|gb|EKN54038.1| translation factor Sua [Cupriavidus necator HPC(L)]
Length = 207
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P S ++ +++ +G + +PTD+ YA+ C L +A+ERLRR++ ++
Sbjct: 4 FFDIHPLDPQSRLIKQAAQIVGKGGLIALPTDSSYALACRLDDKAAVERLRRLRGIDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L ++ F R D + +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLTLMCRDLSELGN----FARVDNRQ----YRWIKGATPGPYVFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P+ AI QA+L ++ P+IS +++ D + DP+ I + +
Sbjct: 112 ----SHPARKTIGVRVPDHAIPQALLNELGQPIISATLQLPGDAAPLDDPLEIRERLQKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+ GG A TV+D+T P ++R G+G
Sbjct: 168 -LDLVICGGTAPAHACTVIDLTSGEPVLVRAGRG 200
>gi|398335204|ref|ZP_10519909.1| putative translation factor Sua5 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 202
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 17/218 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + KL+ + E L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPMNPEKRKLQQISEKLLEGKVYIFPTDTVYALVADSQSKPGVEKLYELKNIPRN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS+LC S+ Y P + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLLCPSISVASNYIEHLPN-------DAFRLMKKITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +++ PL STSV ++E++++ + + YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAVYLQELMKIHPNPLTSTSV--FANDEFIIEVESLEEIYG- 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ ++ +VDGG+ E ST++D+T ++R+GKG +L
Sbjct: 164 KRVEGIVDGGIVEVELSTILDVTEDKMIVVREGKGAEL 201
>gi|313675808|ref|YP_004053804.1| translation factor sua5 [Marivirga tractuosa DSM 4126]
gi|312942506|gb|ADR21696.1| translation factor SUA5 [Marivirga tractuosa DSM 4126]
Length = 207
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 19/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ D K++ +V+LLK+GAV + PTDT+Y + CDL + AI++L +K+++P K
Sbjct: 5 FIKLFEENPDPRKIQQIVDLLKDGAVIIYPTDTIYGLGCDLTNRKAIDKLCWVKDIKPGK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS +C + I Y F+ +K LPGP+TFIL A+ VPK
Sbjct: 65 INLSFICEDMSHISDYVKNL-------STPTFKLMKKNLPGPFTFILPANSNVPKIV--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYG 179
+ +K VG+RIPN+ I A+++ + PLI+TS+K D E+ DP I +++
Sbjct: 115 ------NANKKTVGIRIPNNNIPIALVKALGNPLITTSIKDNDDIVEYPTDPEEIYESFK 168
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PSTV+D T +I+R+G G
Sbjct: 169 -NLVDVVIDGGYGNNNPSTVIDCTKEPAEIVREGLG 203
>gi|421099412|ref|ZP_15560064.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. 200901122]
gi|410797397|gb|EKR99504.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. 200901122]
Length = 202
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG+V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISNRLLEGSVYIFPTDTVYALVADSQSKFGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKRITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +LQ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLQVHPNPLTSTSV--FANDEFIIEVDLLERVYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MTG I+R+GKG
Sbjct: 165 R-VEGIVDGGIVKMELSTILNMTGDKMTIVREGKG 198
>gi|383456098|ref|YP_005370087.1| Sua5/YciO/YrdC/YwlC family protein [Corallococcus coralloides DSM
2259]
gi|380734794|gb|AFE10796.1| Sua5/YciO/YrdC/YwlC family protein [Corallococcus coralloides DSM
2259]
Length = 206
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 112/199 (56%), Gaps = 23/199 (11%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE+L++G + PTDT Y + CDL + AIERL ++K + KPLS+LC L D+ Y
Sbjct: 25 VEVLEKGGLIAYPTDTYYGLGCDLNAKKAIERLYQLKGRDKKKPLSLLCPDLSDVARY-- 82
Query: 79 GFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
H + F RA+K PG +TFIL A++ VP+ + + +K VG+R
Sbjct: 83 --------AHVSNFAYRAMKGLTPGAFTFILEATRLVPEVMM---------TKQKQVGLR 125
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEP 196
+P+ A+ + + + + PLI+TS D + D I G GLD ++DGGV + EP
Sbjct: 126 VPDAALPRELAKALGRPLITTSATH-TDGTVLSDARDIKTALG-HGLDLILDGGVTLNEP 183
Query: 197 STVVDMTGTYPKIIRQGKG 215
STVV + G +I+RQGKG
Sbjct: 184 STVVSLIGDTLEILRQGKG 202
>gi|398340660|ref|ZP_10525363.1| putative translation factor Sua5 [Leptospira kirschneri serovar Bim
str. 1051]
gi|421088318|ref|ZP_15549143.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
200802841]
gi|410002949|gb|EKO53398.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
200802841]
Length = 202
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 17/208 (8%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSL 70
+ KL+ + + L +G V + PTDT+YA+V D +S +E+L +KN+ ++PLS++C S+
Sbjct: 11 EKRKLQQISDQLSQGKVYIFPTDTVYALVADSQSKPGVEKLYELKNIPKNQPLSLMCSSI 70
Query: 71 RDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLR 130
Y + FR +K PGP+TFI +A+K +P R + K
Sbjct: 71 SVASNYIEHLSN-------DAFRLMKKITPGPFTFITSANKHLP----RVSFSNQK---E 116
Query: 131 KHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGG 190
K +G+RIP+ Q +++ PL STSV ++E++++ + TYG ++ +VDGG
Sbjct: 117 KQIGIRIPDTIYLQELMKIHPNPLTSTSV--FANDEFIIEVDSLEKTYGSR-VEGIVDGG 173
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ E ST++D+TG IIR+GKG +L
Sbjct: 174 ILKVELSTILDLTGDEITIIREGKGFEL 201
>gi|152997398|ref|YP_001342233.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas sp. MWYL1]
gi|150838322|gb|ABR72298.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas sp. MWYL1]
Length = 210
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 17/220 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ E+++ G V PTD Y++ C L A++R+R I+ ++
Sbjct: 8 FFQIHPENPQARLVKQAAEVIRNGGVIAYPTDCGYSLGCHLGDKDALDRIRAIRRLDDKH 67
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D + ++R +K+ PGPYTFI +A+ EVP++ +
Sbjct: 68 NFTLVCRDLSEISTYA----RFDNR----LYRLLKNNTPGPYTFIFSATSEVPRRLL--- 116
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+PN+ I A+L+++ P++S+S+ + + M DP I DT
Sbjct: 117 -----HPKRKTIGIRVPNNNIVSALLEELGEPIMSSSLILPGETDPMTDPYDIRDTL-EH 170
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
LD V+DGG +P+TVV M +++R G G +M
Sbjct: 171 ALDLVIDGGFCGLQPTTVVKMDADSIEVVRVGAGDPAPFM 210
>gi|418693637|ref|ZP_13254687.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
H1]
gi|421106786|ref|ZP_15567350.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
H2]
gi|409958663|gb|EKO17554.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
H1]
gi|410008252|gb|EKO61927.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
H2]
Length = 202
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 17/208 (8%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSL 70
+ KL+ + + L +G V + PTDT+YA+V D +S +E+L +KN+ ++PLS++C S+
Sbjct: 11 EKRKLQQISDQLSQGKVYIFPTDTVYALVADSQSKPGVEKLYELKNIPKNQPLSLICSSI 70
Query: 71 RDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLR 130
Y + FR +K PGP+TFI A+K++P R + K
Sbjct: 71 SVASNYIEHLSN-------DAFRLMKKITPGPFTFITNANKDLP----RVSFSNQK---E 116
Query: 131 KHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGG 190
K +G+RIP+ Q +++ PL STSV + ++E++++ + TYG ++ +VDGG
Sbjct: 117 KQIGIRIPDTIYLQELMKIHPNPLTSTSV--IANDEFIIEVDSLEKTYGSR-VEGIVDGG 173
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ E ST++D+TG IIR+GKG +L
Sbjct: 174 ILKVELSTILDLTGDEITIIREGKGFEL 201
>gi|85817197|gb|EAQ38380.1| YrdC protein [Dokdonia donghaensis MED134]
Length = 205
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 125/215 (58%), Gaps = 25/215 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +P+ D L+ +V++LK G + + P+DT+YA+ CD+ + A+E++ +IK V+ +K
Sbjct: 9 EENPNPKD---LKQIVKILKAGGLIIYPSDTVYALGCDITNAKALEKVAQIKGVKLAKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L ++ Y Q F+ +K LPGPYTFIL + +P
Sbjct: 66 FSFVCEDLSNLSDYVR-------QIDTKTFKILKRALPGPYTFILPGNNNLP-------- 110
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGP 180
+ + +K VG+R+P++ I +AI++ + P++STS+ + +D E+ DP +I + +
Sbjct: 111 --SSFKKKKEVGIRVPDNEITRAIVRALGNPIVSTSI-YDEDEVIEYTTDPELIFEKW-Q 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VDGG PSTV+D+TG P +IR+GKG
Sbjct: 167 NRVDVIVDGGYGGNIPSTVIDLTGDEPILIREGKG 201
>gi|372210174|ref|ZP_09497976.1| translation factor [Flavobacteriaceae bacterium S85]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 122/213 (57%), Gaps = 24/213 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSI 65
P + +L+ VV++L+EG + + P+DT+Y + CD+ ++ A+ERL +IK ++ K S
Sbjct: 9 PENPNERELQKVVKVLREGGLIIYPSDTVYTLGCDISNYKAMERLAKIKGIKLEKNTFSF 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L + Y + F+ +K LPGPYTF+L A +PK
Sbjct: 69 VCNDLSHLSDYVKPI-------DNSTFKLLKRSLPGPYTFVLPAINNLPK---------- 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEG 182
+ RK VG+RIP++ I + I++ + +P+ STS+K D+ E+ DP +I + +
Sbjct: 112 AFKKRKTVGIRIPDNNITREIVRLLGSPIASTSIK--DDDEVIEYTTDPELIYEKW-EHL 168
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVDGG STV+D++G+ P+IIR+GKG
Sbjct: 169 VDVVVDGGYGDNVASTVIDVSGSEPEIIREGKG 201
>gi|452879446|ref|ZP_21956548.1| hypothetical protein G039_23940 [Pseudomonas aeruginosa VRFPA01]
gi|452184001|gb|EME11019.1| hypothetical protein G039_23940 [Pseudomonas aeruginosa VRFPA01]
Length = 209
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGLY--------AKVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ +E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSSEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|427716830|ref|YP_007064824.1| translation factor SUA5 [Calothrix sp. PCC 7507]
gi|427349266|gb|AFY31990.1| translation factor SUA5 [Calothrix sp. PCC 7507]
Length = 219
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 26/219 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E V L GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQIRRIEEVKSALSCGAVMLYPTDTVYAIGCDLNAKSAVERVRKIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY++ +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATYSS--------VSDTAYRIMKRLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD--NEWMVD---PVVIADTYGPE 181
RK G+R+PN +C A+L + P+ISTS D ++ MV +++ T +
Sbjct: 113 SPKRKTTGIRVPNHTVCLALLTALGNPIISTSAHLPPDEADDEMVGISPKPILSQTELFD 172
Query: 182 GLDFVVDGGVRVAEP-----STVVDMTGTYPKIIRQGKG 215
LD +VD V E ST++D+TG P I RQG G
Sbjct: 173 RLDSLVDVIVDTGEEPSYEVSTILDLTGEEPMITRQGLG 211
>gi|397690469|ref|YP_006527723.1| Sua5/YciO/YrdC/YwlC family protein [Melioribacter roseus P3M]
gi|395811961|gb|AFN74710.1| Sua5/YciO/YrdC/YwlC family protein [Melioribacter roseus P3M]
Length = 204
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 19/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + V++L+ G V + PTDT+Y I CD+ +H A+ER+ IK +K
Sbjct: 3 FYELHPITPQQRFINKAVDVLRSGGVIIYPTDTVYGIGCDIFNHEALERIYTIKQDSGTK 62
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S +C L+DI Y + ++A+K LPGPYTF+L A++EVPKK
Sbjct: 63 LFSFICPDLKDISKY--------AKVSDYAYKAMKKLLPGPYTFVLPAAREVPKKL---- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK VG+RIP++ + + +++ P+ISTSV K E + DP I + +
Sbjct: 111 -----WTKRKTVGIRIPDNKVALMLAKELGNPIISTSVTNRK-GEILYDPEEIRLIFNNQ 164
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ G +PS+++D++ P+IIR+G G
Sbjct: 165 -IDLMLSVGALEGKPSSIIDLSEEEPEIIREGAG 197
>gi|238794708|ref|ZP_04638312.1| hypothetical protein yinte0001_18120 [Yersinia intermedia ATCC
29909]
gi|238725939|gb|EEQ17489.1| hypothetical protein yinte0001_18120 [Yersinia intermedia ATCC
29909]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKAAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I D G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKDHLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSSPEVIREGAG 200
>gi|49079254|gb|AAT49871.1| PA3199, partial [synthetic construct]
Length = 210
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGVYA--------KVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|22297687|ref|NP_680934.1| hypothetical protein tlr0143 [Thermosynechococcus elongatus BP-1]
gi|22293864|dbj|BAC07696.1| tlr0143 [Thermosynechococcus elongatus BP-1]
Length = 213
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 26/217 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P + +VE LKEGAV + PTDT+YAI CD+ A++R+R++K + KP+
Sbjct: 6 ELHPVNPQPRAIAQIVEALKEGAVMLYPTDTVYAIGCDMNHKGAVQRVRQLKQLSNDKPV 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y + +R ++ +PGPYTF+L A+K VP+
Sbjct: 66 TFLCSSLSNIAQY--------AYVSDSAYRLMRRLIPGPYTFLLPATKLVPR-------- 109
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK G+R+P+ + QA+L + P+ISTS + D + V+ + D + + +
Sbjct: 110 LVQNPKRKTTGIRVPDHVVSQALLTALGNPIISTSARLPDDETYYVNTADLFDAFD-KRV 168
Query: 184 DFVVDGGVRVAEP-----STVVDMTGTYPKIIRQGKG 215
D ++D G EP S+++D+T P ++R+G+G
Sbjct: 169 DLMIDTG----EPPTQQMSSILDLTVEPPLLVRKGRG 201
>gi|15598395|ref|NP_251889.1| hypothetical protein PA3199 [Pseudomonas aeruginosa PAO1]
gi|116051189|ref|YP_789980.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|254236161|ref|ZP_04929484.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254241887|ref|ZP_04935209.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388314|ref|ZP_06877789.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa PAb1]
gi|313108516|ref|ZP_07794517.1| putative Sua5/YciO/YrdC/YwlC protein family [Pseudomonas aeruginosa
39016]
gi|355640902|ref|ZP_09051954.1| hypothetical protein HMPREF1030_01040 [Pseudomonas sp. 2_1_26]
gi|386057839|ref|YP_005974361.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa M18]
gi|386067221|ref|YP_005982525.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|416879827|ref|ZP_11921036.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa 152504]
gi|418588287|ref|ZP_13152301.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418593065|ref|ZP_13156923.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|420138958|ref|ZP_14646830.1| hypothetical protein PACIG1_2327 [Pseudomonas aeruginosa CIG1]
gi|421152885|ref|ZP_15612454.1| hypothetical protein PABE171_1801 [Pseudomonas aeruginosa ATCC
14886]
gi|421159386|ref|ZP_15618536.1| hypothetical protein PABE173_2127 [Pseudomonas aeruginosa ATCC
25324]
gi|421166658|ref|ZP_15624895.1| hypothetical protein PABE177_1713 [Pseudomonas aeruginosa ATCC
700888]
gi|421173607|ref|ZP_15631348.1| hypothetical protein PACI27_1841 [Pseudomonas aeruginosa CI27]
gi|421179647|ref|ZP_15637227.1| hypothetical protein PAE2_1675 [Pseudomonas aeruginosa E2]
gi|421517730|ref|ZP_15964404.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa PAO579]
gi|424942567|ref|ZP_18358330.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa NCMG1179]
gi|451984571|ref|ZP_21932821.1| YciO family [Pseudomonas aeruginosa 18A]
gi|9949319|gb|AAG06587.1|AE004744_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115586410|gb|ABJ12425.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126168092|gb|EAZ53603.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126195265|gb|EAZ59328.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|310881019|gb|EFQ39613.1| putative Sua5/YciO/YrdC/YwlC protein family [Pseudomonas aeruginosa
39016]
gi|334836983|gb|EGM15765.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa 152504]
gi|346059013|dbj|GAA18896.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa NCMG1179]
gi|347304145|gb|AEO74259.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa M18]
gi|348035780|dbj|BAK91140.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|354831125|gb|EHF15152.1| hypothetical protein HMPREF1030_01040 [Pseudomonas sp. 2_1_26]
gi|375040968|gb|EHS33694.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375048191|gb|EHS40720.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|403248297|gb|EJY61881.1| hypothetical protein PACIG1_2327 [Pseudomonas aeruginosa CIG1]
gi|404347212|gb|EJZ73561.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa PAO579]
gi|404524707|gb|EKA35028.1| hypothetical protein PABE171_1801 [Pseudomonas aeruginosa ATCC
14886]
gi|404535662|gb|EKA45345.1| hypothetical protein PACI27_1841 [Pseudomonas aeruginosa CI27]
gi|404537451|gb|EKA47048.1| hypothetical protein PABE177_1713 [Pseudomonas aeruginosa ATCC
700888]
gi|404546759|gb|EKA55798.1| hypothetical protein PAE2_1675 [Pseudomonas aeruginosa E2]
gi|404547628|gb|EKA56620.1| hypothetical protein PABE173_2127 [Pseudomonas aeruginosa ATCC
25324]
gi|451757884|emb|CCQ85344.1| YciO family [Pseudomonas aeruginosa 18A]
Length = 209
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGVY--------AKVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|90416537|ref|ZP_01224468.1| hypothetical protein GB2207_05027 [gamma proteobacterium HTCC2207]
gi|90331736|gb|EAS46964.1| hypothetical protein GB2207_05027 [gamma proteobacterium HTCC2207]
Length = 204
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+ P + ++++G V V PTD++YAI C + A++R+R I+ ++ +
Sbjct: 4 YLSIHPENPQQRLIAKAAAIVRKGGVIVYPTDSVYAIGCHIGDKQAMDRIRSIRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ +Y R D FR++K PGP+TFIL A+ EVP++ +
Sbjct: 64 NFTLMCRDLSELASYA----RVDNSA----FRSLKAQTPGPFTFILPATSEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I QA+L ++ P++S ++ D + DP I
Sbjct: 113 -----HPKRKTIGLRVPDSPIAQALLDELGEPMMSVTLILPGDEYPLSDPYDIRAALEAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVDMTG P++ RQG G
Sbjct: 168 -VDVLIDGGHCGLEPTTVVDMTGPVPEVTRQGMG 200
>gi|404403831|ref|ZP_10995415.1| translation factor SUA5 [Alistipes sp. JC136]
Length = 200
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 27/215 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +PS +L VV+LL+ + + PTD++YA C L+S AI++LRRIK + S
Sbjct: 7 EQNPS---EKELRRVVDLLERDEIIIYPTDSVYAFGCSLRSAKAIDKLRRIKG-KGSAAF 62
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+++ ++ + Y R D +F+ +K LPGP+TF+L AS +P K +
Sbjct: 63 TVVFENIAQVAEYC----RVDNA----VFKILKRNLPGPFTFVLAASARIPDKALER--- 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGP 180
R+ +GVRIP +A+ +A++ + P+++ SVK D+ E+ DP +I + YG
Sbjct: 112 ------RRTIGVRIPANAVARAVVGALGCPMVTASVK--DDDEVVEYTTDPELIHERYGN 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ + V+DGG+ P+TVVD+TG P+I+R+GKG
Sbjct: 164 D-VALVIDGGIGDNVPTTVVDLTGDEPEILREGKG 197
>gi|429756121|ref|ZP_19288733.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|429172063|gb|EKY13646.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 119/201 (59%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLRRGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+P++ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 123 VPDNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P ++R+GKG
Sbjct: 181 VASTVIDLSGDAPVVLREGKG 201
>gi|427707798|ref|YP_007050175.1| translation factor SUA5 [Nostoc sp. PCC 7107]
gi|427360303|gb|AFY43025.1| translation factor SUA5 [Nostoc sp. PCC 7107]
Length = 219
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 28/220 (12%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S ++E + L +GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQSRRIEEIKSALSDGAVMLYPTDTVYAIGCDLNAKSAVERVRKIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDTA------YRLMKRLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSV----------KWLKDNEWMVDPVVIAD 176
RK G+R+PN +C A+L+ ++ P+ISTS K+ D E + V + D
Sbjct: 113 NPKRKTTGIRVPNHPVCLALLEALENPIISTSAHLPTNEADDGKFALDVEPGLSRVELFD 172
Query: 177 TYGPEGLDFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKG 215
Y +D +VD G + ST++D+TG I R+G G
Sbjct: 173 -YLDNLVDVIVDTGEEPTYQVSTILDLTGDEAVITRRGLG 211
>gi|418686801|ref|ZP_13247966.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418740736|ref|ZP_13297113.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421129765|ref|ZP_15589965.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
2008720114]
gi|410359140|gb|EKP06249.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri str.
2008720114]
gi|410738872|gb|EKQ83605.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410752113|gb|EKR09089.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 202
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 17/208 (8%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSL 70
+ KL+ + + L +G V + PTDT+YA+V D +S +E+L +KN+ ++PLS++C S+
Sbjct: 11 EKRKLQQISDQLSQGKVYIFPTDTVYALVADSQSKPGVEKLYELKNIPKNQPLSLICSSI 70
Query: 71 RDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLR 130
Y + FR +K PGP+TFI +A+K +P R + K
Sbjct: 71 SVASNYIEHLSN-------DAFRLMKKITPGPFTFITSANKHLP----RVSFSNQK---E 116
Query: 131 KHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGG 190
K +G+RIP+ Q +++ PL STSV ++E++++ + TYG ++ +VDGG
Sbjct: 117 KQIGIRIPDTIYLQELMKIHPNPLTSTSV--FANDEFIIEVDSLEKTYGSR-VEGIVDGG 173
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ E ST++D+TG IIR+GKG +L
Sbjct: 174 ILKVELSTILDLTGDEITIIREGKGFEL 201
>gi|378767074|ref|YP_005195539.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea ananatis LMG 5342]
gi|386079241|ref|YP_005992766.1| putative RNA-binding protein YciO [Pantoea ananatis PA13]
gi|354988422|gb|AER32546.1| putative RNA-binding protein YciO [Pantoea ananatis PA13]
gi|365186552|emb|CCF09502.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea ananatis LMG 5342]
Length = 206
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE L +G V V PTD+ YA+ C L+ A+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVEYLNKGGVIVYPTDSGYALGCRLEEKGAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLLKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I + G + +D +
Sbjct: 114 -DKRKTIGLRVPSNPVALALLETLNEPMMSTSLILPGNDFTESDPEDIQQSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG +P+TV+D+T P+++R+G G
Sbjct: 172 IDGGTLGQQPTTVIDLTSDAPEVVREGVG 200
>gi|399544276|ref|YP_006557584.1| translation factor [Marinobacter sp. BSs20148]
gi|399159608|gb|AFP30171.1| putative translation factor (SUA5) [Marinobacter sp. BSs20148]
Length = 206
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + V++L++G V PTD+ YA+ C L SA +R++RI+ ++
Sbjct: 4 FFQIHPDNPQKRLINQAVDILRKGGVIAYPTDSGYALGCHLGDKSASDRIKRIRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L DI TY + +R +K PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSDIGTY--------AKVDNTTYRMLKTYTPGAYTFILDATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P++A+ A+L + P++S+++ + E M DP I D E
Sbjct: 113 -----HPKRRTIGVRVPDNAVVHALLGEFGEPIMSSTLILPGETEPMTDPEDIRDALEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG E +TVV+ T P++ R GKG
Sbjct: 168 -LDLIIDGGFCGMEATTVVNFTSGSPEVTRVGKG 200
>gi|319795295|ref|YP_004156935.1| sua5/ycio/yrdc/ywlc family protein [Variovorax paradoxus EPS]
gi|315597758|gb|ADU38824.1| Sua5/YciO/YrdC/YwlC family protein [Variovorax paradoxus EPS]
Length = 211
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ V LL G + VPTD+ YA+ C L A+++LRRI+ V+
Sbjct: 4 YFEVHPENPQQRLLKQAVTLLARGEIVAVPTDSSYALACHLDDKDAVDQLRRIRQVDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTF+L A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNKQ----YRLLKAATPGPYTFLLEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ + +L APL++T++ + E + D I + + +
Sbjct: 112 ----SHPQRKTIGLRVPDHKVLLELLALHGAPLLATTLIAPGETEALNDAQTIRERFEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+ V+D G ++P+TVVD+ TG P ++RQG+G
Sbjct: 168 -IGAVIDAGACPSQPTTVVDLTPMGTGDDPVVVRQGRG 204
>gi|37526349|ref|NP_929693.1| hypothetical protein plu2456 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785780|emb|CAE14830.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 206
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++LK+G V + PTD+ YAI C L+ ++ R+ RI+ ++ +++CR L +I TY
Sbjct: 21 VDMLKKGGVVIYPTDSGYAIGCHLEDKDSMTRICRIRQLDSHHNFTLMCRDLSEISTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILRATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+++ PL+STS+ ++ DP I D G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLEQVGEPLMSTSLILPGNDFAESDPEEIKDNLGKQ-VDLIIHGGYLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T P +IR+G G
Sbjct: 184 VIDLTEDTPVVIREGAG 200
>gi|417780353|ref|ZP_12428117.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira weilii str.
2006001853]
gi|410779592|gb|EKR64206.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira weilii str.
2006001853]
Length = 202
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISNNLLEGNVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKRITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +LQ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLQLHPNPLTSTSV--FANDEFIIEVDLLERVYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MTG IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILNMTGDKMAIIREGKG 198
>gi|323144451|ref|ZP_08079054.1| Sua5/YciO/YrdC/YwlC family protein [Succinatimonas hippei YIT
12066]
gi|322415766|gb|EFY06497.1| Sua5/YciO/YrdC/YwlC family protein [Succinatimonas hippei YIT
12066]
Length = 207
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++ P ++ +++ G VGV+PTD+ YA+ C++ +A+ER+ I+ +
Sbjct: 5 FISIHPDNPQPRFIKKACSIIESGGVGVIPTDSAYALCCNIGDKNAMERIAAIRKISKKH 64
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + N+FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 65 NFTLICRDLSELSTY--------AKVSNNVFRLLKNNTPGAYTFILPATKEVPRRLMNEK 116
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +G+R+P AI +A+L + PL+S S+ E DP+ I D G
Sbjct: 117 --------KRTIGIRVPAGAIIEALLNECSEPLLSCSLILPDHEEPENDPITINDEIG-S 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VDGGV A P+TV+ P + R G+G
Sbjct: 168 IVDVIVDGGVLDAMPTTVIRFEDDIPVVRRVGRG 201
>gi|452125664|ref|ZP_21938247.1| hypothetical protein F783_09149 [Bordetella holmesii F627]
gi|452129027|ref|ZP_21941603.1| hypothetical protein H558_08903 [Bordetella holmesii H558]
gi|451920759|gb|EMD70904.1| hypothetical protein F783_09149 [Bordetella holmesii F627]
gi|451924897|gb|EMD75037.1| hypothetical protein H558_08903 [Bordetella holmesii H558]
Length = 208
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + L+ + + +G + VPTD+ YA+V L A +RLRR++ ++
Sbjct: 3 LHLTIHPDNPQARLLKQAAQCISDGGLVAVPTDSSYAVVARLDDKDAADRLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F + D + +R +K PGP+TFIL A++EVP++
Sbjct: 63 HHLTLLCRDLAEI----GHFAKVDNRQ----YRLLKLATPGPWTFILEATREVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P A+ A+L+++ APL+ST++ + + + DP I Y
Sbjct: 112 -----SHPSRKTIGIRVPEHAVALALLEQVGAPLLSTTLIPRDEEDALNDPEDIGLRYAH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E L V+D G P+TV+D+TG P ++R+G+G
Sbjct: 167 E-LAAVIDAGACAQHPTTVIDLTGDEPVVLRRGRG 200
>gi|107102729|ref|ZP_01366647.1| hypothetical protein PaerPA_01003796 [Pseudomonas aeruginosa PACS2]
gi|218890608|ref|YP_002439472.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa LESB58]
gi|392983074|ref|YP_006481661.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa DK2]
gi|419752477|ref|ZP_14278884.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa PADK2_CF510]
gi|218770831|emb|CAW26596.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa LESB58]
gi|384401017|gb|EIE47373.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa PADK2_CF510]
gi|392318579|gb|AFM63959.1| putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Pseudomonas aeruginosa DK2]
Length = 209
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGVYA--------KVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGRGEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|308187010|ref|YP_003931141.1| hypothetical protein Pvag_1502 [Pantoea vagans C9-1]
gi|308057520|gb|ADO09692.1| Uncharacterized protein yciO [Pantoea vagans C9-1]
Length = 206
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+ L +G+V V PTD+ YA+ C L+ A+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVDYLNKGSVIVYPTDSGYALGCRLEEKGAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLLKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I + G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPVALALLEALNQPMMSTSLILPGNDFTESDPEEIQHSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG +P+TVVD+T P+I+R+G G
Sbjct: 172 IDGGTLGQQPTTVVDLTTDSPEIVREGVG 200
>gi|160872342|ref|ZP_02062474.1| Sua5/YciO/YrdC/YwlC family protein [Rickettsiella grylli]
gi|159121141|gb|EDP46479.1| Sua5/YciO/YrdC/YwlC family protein [Rickettsiella grylli]
Length = 208
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 114/195 (58%), Gaps = 18/195 (9%)
Query: 21 LLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGF 80
++KEG + V PTD+ YA+ C L + I+R+++I+ ++ L++LCR + ++ +
Sbjct: 24 VMKEGVI-VYPTDSAYALGCQLTNKKGIQRIKQIRQLKDQHSLTLLCRDISEMAHF---- 78
Query: 81 PRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
Q IFR +K PGPYTF+L A+ VP+ + ++ RK +G+RIP++
Sbjct: 79 ----AQLETPIFRLIKANTPGPYTFLLPATSHVPRYLI--------HAKRKTIGIRIPDN 126
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I A+L+ D PLI+T++ + +++P I D G + +D V+DGG E +TV+
Sbjct: 127 KIVHALLEMNDQPLINTTLILPDSDLPLLEPEAIRDILG-KRVDLVIDGGFCGLELTTVI 185
Query: 201 DMTGTYPKIIRQGKG 215
D++G P IIR GKG
Sbjct: 186 DLSGHIPHIIRCGKG 200
>gi|385809184|ref|YP_005845580.1| SUA5 family translation factor [Ignavibacterium album JCM 16511]
gi|383801232|gb|AFH48312.1| Putative SUA5 family translation factor [Ignavibacterium album JCM
16511]
Length = 203
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 19/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + +++L G + + PTDT Y I CDL + IE+L IKN +K
Sbjct: 3 FYELHPVNPQIRFINKAIDVLHNGGIVIFPTDTYYGIGCDLYNKEGIEKLLAIKNETNTK 62
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S + +DI Y + F+ +K LPGPYTFIL A+KEVPKK
Sbjct: 63 LFSFIFSDFKDISKY--------AKVSDYAFKIMKKLLPGPYTFILPAAKEVPKKL---- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+S RK VG+R+P +C+ ++ + P++STS + + +VDP I + + +
Sbjct: 111 -----WSKRKTVGIRMPEHNVCKLLVAGLANPIVSTSTTN-RLGDPIVDPNEIKNVFNSQ 164
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ +AEPSTV+D++G P I+R+G G
Sbjct: 165 -VDLMLASSNLIAEPSTVIDLSGDEPVIVREGAG 197
>gi|304396084|ref|ZP_07377966.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. aB]
gi|372273478|ref|ZP_09509514.1| hypothetical protein PSL1_00195 [Pantoea sp. SL1_M5]
gi|390434132|ref|ZP_10222670.1| hypothetical protein PaggI_04815 [Pantoea agglomerans IG1]
gi|440760249|ref|ZP_20939365.1| YciO family [Pantoea agglomerans 299R]
gi|304356453|gb|EFM20818.1| Sua5/YciO/YrdC/YwlC family protein [Pantoea sp. aB]
gi|436426259|gb|ELP23980.1| YciO family [Pantoea agglomerans 299R]
Length = 206
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+ L +G+V V PTD+ YA+ C L+ A+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVDYLNKGSVIVYPTDSGYALGCRLEEKGAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLLKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I + G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPVALALLEALNQPMMSTSLILPGNDFTESDPEEIQHSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG +P+TVVD+T P+I+R+G G
Sbjct: 172 IDGGTLGQQPTTVVDLTTDAPEIVREGVG 200
>gi|108757718|ref|YP_632028.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus xanthus DK 1622]
gi|108461598|gb|ABF86783.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus xanthus DK 1622]
Length = 203
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E D ++ VE+L+ G + PTDT + + CDL S IERL ++K + KP
Sbjct: 6 LEVDTEHPSPRHIQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS LC L D+ Y H + F R +K PG +TFIL A++ VP +
Sbjct: 66 LSFLCPDLSDVARY----------AHVSNFAYRTMKSLTPGAFTFILEATRLVPDLMM-- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P+ A+ + + + + PL++TS + E + D I G
Sbjct: 114 -------SKQKQVGIRVPDSALVRELTRALGRPLVTTSATN-TEGEPLTDAKDIKADLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLD ++DGGV + EPSTV+ + G +I+RQGKG
Sbjct: 165 HGLDLILDGGVTLNEPSTVISLIGDSLEILRQGKG 199
>gi|420579475|ref|ZP_15074039.1| hypothetical protein YPPY07_2475 [Yersinia pestis PY-07]
gi|391458378|gb|EIR17248.1| hypothetical protein YPPY07_2475 [Yersinia pestis PY-07]
Length = 206
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ +
Sbjct: 4 FFYTHPDNPQPRLINQCVDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLVCRDLSELSTY--------AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L + PL+ST++ ++ DP I + G +
Sbjct: 114 ------DKRKTIGLRVPSNPIALALLDALGEPLMSTTLMLPGNDFAESDPEEIKENLGKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GG +P+TV+D+T + P++IR+G G
Sbjct: 168 -VDLIIHGGSLGQQPTTVIDLTDSAPEVIREGAG 200
>gi|339488738|ref|YP_004703266.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida S16]
gi|338839581|gb|AEJ14386.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida S16]
Length = 221
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ +
Sbjct: 16 FFQIHPENPQQRLIKQAVEIIRKGGVVVYPTDSAYALGCQMGDKAAIERVRRLRGLDKTH 75
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 76 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 124
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P AI A+L ++ PL+S S+ D E M DP I +
Sbjct: 125 -----HDKRRTIGLRVPAHAITLALLAELGEPLMSVSLILPGDTEPMTDPYEIRERL-EH 178
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P+++R+G G
Sbjct: 179 HVDLVIDGGFGDLKASTIIDLSGDEPELVREGCG 212
>gi|291617617|ref|YP_003520359.1| hypothetical protein PANA_2064 [Pantoea ananatis LMG 20103]
gi|386015978|ref|YP_005934263.1| protein YciO [Pantoea ananatis AJ13355]
gi|291152647|gb|ADD77231.1| YciO [Pantoea ananatis LMG 20103]
gi|327394045|dbj|BAK11467.1| protein YciO [Pantoea ananatis AJ13355]
Length = 206
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE L +G V V PTD+ YA+ C L+ A+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVEYLNKGGVIVYPTDSGYALGCRLEEKGAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLLKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I + G + +D +
Sbjct: 114 -DKRKTIGLRVPSNPVALALLEALNEPMMSTSLILPGNDFTESDPEDIQHSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG +P+TV+D+T P+++R+G G
Sbjct: 172 IDGGTLGQQPTTVIDLTSDAPEVVREGVG 200
>gi|420258378|ref|ZP_14761113.1| hypothetical protein YWA314_06528 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404514183|gb|EKA27983.1| hypothetical protein YWA314_06528 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 206
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 118/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTYAY 80
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
D Q FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 81 ----VDNQA----FRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKEHLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSSPEVIREGAG 200
>gi|39996696|ref|NP_952647.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
sulfurreducens PCA]
gi|409912117|ref|YP_006890582.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
sulfurreducens KN400]
gi|39983577|gb|AAR34970.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
sulfurreducens PCA]
gi|298505707|gb|ADI84430.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
sulfurreducens KN400]
Length = 203
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P + + V E+L G V PTDT Y I C + S IER+ +K E
Sbjct: 1 MLLSINPDNPQARLISHVAEVLGRGGVIAYPTDTTYGIGCSIFSKKGIERIYLLKQREKK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L ++ Y + ++ +K LPGPYTF++ A+ VP V
Sbjct: 61 KPFSFICSELSEVARY--------AKVSNYAYKILKRYLPGPYTFVIDATSVVPDLLV-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP++ IC A+++++ P+++TS L E + DP+ + T G
Sbjct: 111 -------TKQKTVGIRIPDNRICIALVKELGHPIVTTSAN-LSGEEPIGDPLEVERTLGK 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ LD VVDGG A+ S+VV + G YP+++R+G G
Sbjct: 163 Q-LDLVVDGGNLTADVSSVVSLIGDYPQVLRRGIG 196
>gi|239816993|ref|YP_002945903.1| Sua5/YciO/YrdC/YwlC family protein [Variovorax paradoxus S110]
gi|239803570|gb|ACS20637.1| Sua5/YciO/YrdC/YwlC family protein [Variovorax paradoxus S110]
Length = 211
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL+ G + VPTD+ YA+ C L A+++LRRI+ V+
Sbjct: 4 YFEVHPENPQQRLLKQAAALLQRGEIVAVPTDSSYALACHLDDKDAVDQLRRIRQVDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTF+L A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNKQ----YRLLKAATPGPYTFLLEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ + +L APL++T++ + E + D I + + +
Sbjct: 112 ----SHPQRKTIGLRVPDHKVLLELLMLHGAPLLATTLIAPGETEALNDAQTIRERFEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+ V+D G ++P+TVVD+ TG P ++RQG+G
Sbjct: 168 -IGAVIDAGACPSQPTTVVDLTPMGTGDDPVVVRQGRG 204
>gi|398844891|ref|ZP_10601942.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM84]
gi|398254099|gb|EJN39205.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM84]
Length = 221
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ ++LC L +
Sbjct: 29 IKQAVEIIRKGGVVVYPTDSAYALGCQIGDKNAIERVRRLRQLDKQHNFTLLCCDLSQMG 88
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
+ + + FR +K +PGPYTFIL A++EVP+ + + R+ +G
Sbjct: 89 LF--------AKIDTSTFRLLKAHVPGPYTFILNATREVPRLLM--------HEKRRTIG 132
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+++ PL+S S+ D E M DP I +D ++DGG
Sbjct: 133 LRVPSNPIVLALLEELGEPLMSVSLILPGDEEPMTDPYEIRQRL-EHHVDLIIDGGFGDL 191
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+ ST++D+TG P +IR+G G
Sbjct: 192 KASTIIDLTGDEPALIREGCG 212
>gi|345875696|ref|ZP_08827486.1| hypothetical protein l11_15710 [Neisseria weaveri LMG 5135]
gi|343968595|gb|EGV36821.1| hypothetical protein l11_15710 [Neisseria weaveri LMG 5135]
Length = 206
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 18/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++++G V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIIRKGGVVAYPTDSCYALGCHLGDKDAMERILRIRQIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L ++ PL+S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNKIALALLAELGEPLLSCTLMLPEDEEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT ++IR+GKG
Sbjct: 167 SVDLVIDGGWCGVEPTTVIDMTDGV-ELIREGKG 199
>gi|422301564|ref|ZP_16388931.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789380|emb|CCI14564.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 213
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + LK GA+ + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PENPQQRSIQEICHALKNGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKQLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y ++ ++ +PGPYTF+L A+K VPK +
Sbjct: 69 CSSLSNISEYAVVSDYA--------YKIMRRVIPGPYTFLLPATKLVPKVVMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK G+R+P+ IC+ I++ ++ P+IS+S L D E + + LD +
Sbjct: 114 -PKRKTTGIRVPDHVICRTIIETLENPIISSSAH-LPDEEGDFPTKGLESARLFDELDHI 171
Query: 187 V-----DGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKL-YWM 221
V DG +E ST+VD T P I+RQG G P+L W+
Sbjct: 172 VDLIIEDGSAPGSEVSTIVDFTSDQPDIVRQGLGWPELQQWL 213
>gi|228472867|ref|ZP_04057624.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275449|gb|EEK14226.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga gingivalis ATCC
33624]
Length = 207
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 123/217 (56%), Gaps = 22/217 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + +++ VV+ L+EG V + PTDT+Y + CD+ A+ER+ ++K ++ K
Sbjct: 4 FIKIYPENPNEREIQKVVDCLREGGVIIYPTDTVYGLGCDITHSKALERIAQLKGIKLDK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPG YTFIL S +PK
Sbjct: 64 ANFSFICADLSNLSDYVK-------QIDTTTFKLLKRALPGAYTFILPGSNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTY 178
++ +K VG+RIP++ I + +++K+ P++S+S+ + +D E+ DP +I + +
Sbjct: 112 -----EFKKKKTVGIRIPDNTIARTLVEKLGNPIVSSSI-YDEDEVLEYTTDPELIFEKW 165
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STV+D++ P++IRQGKG
Sbjct: 166 -QDKVDIVIDGGYGDNVASTVIDLSSGVPELIRQGKG 201
>gi|22125943|ref|NP_669366.1| hypothetical protein y2053 [Yersinia pestis KIM10+]
gi|45441809|ref|NP_993348.1| hypothetical protein YP_2009 [Yersinia pestis biovar Microtus str.
91001]
gi|51596460|ref|YP_070651.1| hypothetical protein YPTB2134 [Yersinia pseudotuberculosis IP
32953]
gi|108807565|ref|YP_651481.1| hypothetical protein YPA_1570 [Yersinia pestis Antiqua]
gi|108811841|ref|YP_647608.1| hypothetical protein YPN_1679 [Yersinia pestis Nepal516]
gi|145598220|ref|YP_001162296.1| hypothetical protein YPDSF_0923 [Yersinia pestis Pestoides F]
gi|149365869|ref|ZP_01887904.1| hypothetical protein YPE_1047 [Yersinia pestis CA88-4125]
gi|153949288|ref|YP_001400904.1| hypothetical protein YpsIP31758_1929 [Yersinia pseudotuberculosis
IP 31758]
gi|165927411|ref|ZP_02223243.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938161|ref|ZP_02226720.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010763|ref|ZP_02231661.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166210525|ref|ZP_02236560.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400845|ref|ZP_02306351.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420278|ref|ZP_02312031.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425046|ref|ZP_02316799.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470516|ref|ZP_02335220.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis FV-1]
gi|170024275|ref|YP_001720780.1| hypothetical protein YPK_2040 [Yersinia pseudotuberculosis YPIII]
gi|186895509|ref|YP_001872621.1| hypothetical protein YPTS_2203 [Yersinia pseudotuberculosis PB1/+]
gi|218929308|ref|YP_002347183.1| hypothetical protein YPO2212 [Yersinia pestis CO92]
gi|229894896|ref|ZP_04510074.1| predicted RNA-binding protein [Yersinia pestis Pestoides A]
gi|229897639|ref|ZP_04512795.1| predicted RNA-binding protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229898284|ref|ZP_04513431.1| predicted RNA-binding protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902143|ref|ZP_04517264.1| predicted RNA-binding protein [Yersinia pestis Nepal516]
gi|270490617|ref|ZP_06207691.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis KIM D27]
gi|294503750|ref|YP_003567812.1| hypothetical protein YPZ3_1640 [Yersinia pestis Z176003]
gi|384122534|ref|YP_005505154.1| hypothetical protein YPD4_1944 [Yersinia pestis D106004]
gi|384125795|ref|YP_005508409.1| hypothetical protein YPD8_1331 [Yersinia pestis D182038]
gi|384139960|ref|YP_005522662.1| hypothetical protein A1122_15090 [Yersinia pestis A1122]
gi|384414373|ref|YP_005623735.1| putative RNA-binding protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420552437|ref|ZP_15049789.1| hypothetical protein YPPY02_2546 [Yersinia pestis PY-02]
gi|420557962|ref|ZP_15054642.1| hypothetical protein YPPY03_2599 [Yersinia pestis PY-03]
gi|420563477|ref|ZP_15059528.1| hypothetical protein YPPY04_2581 [Yersinia pestis PY-04]
gi|420568503|ref|ZP_15064091.1| hypothetical protein YPPY05_2549 [Yersinia pestis PY-05]
gi|420574195|ref|ZP_15069249.1| hypothetical protein YPPY06_2607 [Yersinia pestis PY-06]
gi|420589938|ref|ZP_15083494.1| hypothetical protein YPPY09_2612 [Yersinia pestis PY-09]
gi|420595325|ref|ZP_15088342.1| hypothetical protein YPPY10_2624 [Yersinia pestis PY-10]
gi|420600967|ref|ZP_15093375.1| hypothetical protein YPPY11_2690 [Yersinia pestis PY-11]
gi|420606422|ref|ZP_15098278.1| hypothetical protein YPPY12_2728 [Yersinia pestis PY-12]
gi|420611831|ref|ZP_15103150.1| hypothetical protein YPPY13_2599 [Yersinia pestis PY-13]
gi|420617174|ref|ZP_15107840.1| yrdC domain protein [Yersinia pestis PY-14]
gi|420622484|ref|ZP_15112577.1| hypothetical protein YPPY15_2544 [Yersinia pestis PY-15]
gi|420627587|ref|ZP_15117203.1| hypothetical protein YPPY16_2603 [Yersinia pestis PY-16]
gi|420632679|ref|ZP_15121791.1| hypothetical protein YPPY19_2565 [Yersinia pestis PY-19]
gi|420643449|ref|ZP_15131515.1| hypothetical protein YPPY29_2440 [Yersinia pestis PY-29]
gi|420648646|ref|ZP_15136233.1| hypothetical protein YPPY32_2850 [Yersinia pestis PY-32]
gi|420654289|ref|ZP_15141303.1| hypothetical protein YPPY34_2580 [Yersinia pestis PY-34]
gi|420659766|ref|ZP_15146229.1| hypothetical protein YPPY36_2717 [Yersinia pestis PY-36]
gi|420665075|ref|ZP_15150983.1| hypothetical protein YPPY42_2612 [Yersinia pestis PY-42]
gi|420669968|ref|ZP_15155428.1| yrdC domain protein [Yersinia pestis PY-45]
gi|420675329|ref|ZP_15160303.1| hypothetical protein YPPY46_2562 [Yersinia pestis PY-46]
gi|420680922|ref|ZP_15165370.1| hypothetical protein YPPY47_2667 [Yersinia pestis PY-47]
gi|420686212|ref|ZP_15170089.1| hypothetical protein YPPY48_2613 [Yersinia pestis PY-48]
gi|420691403|ref|ZP_15174673.1| hypothetical protein YPPY52_2623 [Yersinia pestis PY-52]
gi|420697185|ref|ZP_15179733.1| hypothetical protein YPPY53_2632 [Yersinia pestis PY-53]
gi|420702792|ref|ZP_15184359.1| yrdC domain protein [Yersinia pestis PY-54]
gi|420708476|ref|ZP_15189185.1| hypothetical protein YPPY55_2560 [Yersinia pestis PY-55]
gi|420713867|ref|ZP_15194004.1| hypothetical protein YPPY56_2633 [Yersinia pestis PY-56]
gi|420719334|ref|ZP_15198747.1| hypothetical protein YPPY58_2625 [Yersinia pestis PY-58]
gi|420724862|ref|ZP_15203555.1| hypothetical protein YPPY59_2630 [Yersinia pestis PY-59]
gi|420730471|ref|ZP_15208576.1| hypothetical protein YPPY60_2585 [Yersinia pestis PY-60]
gi|420740971|ref|ZP_15218045.1| hypothetical protein YPPY63_2620 [Yersinia pestis PY-63]
gi|420746519|ref|ZP_15222819.1| hypothetical protein YPPY64_2644 [Yersinia pestis PY-64]
gi|420752109|ref|ZP_15227714.1| hypothetical protein YPPY65_2601 [Yersinia pestis PY-65]
gi|420757649|ref|ZP_15232317.1| hypothetical protein YPPY66_2814 [Yersinia pestis PY-66]
gi|420763162|ref|ZP_15236996.1| hypothetical protein YPPY71_2384, partial [Yersinia pestis PY-71]
gi|420768349|ref|ZP_15241665.1| hypothetical protein YPPY72_2609 [Yersinia pestis PY-72]
gi|420773387|ref|ZP_15246207.1| hypothetical protein YPPY76_2401 [Yersinia pestis PY-76]
gi|420778924|ref|ZP_15251106.1| hypothetical protein YPPY88_2596 [Yersinia pestis PY-88]
gi|420784511|ref|ZP_15256000.1| hypothetical protein YPPY89_2783 [Yersinia pestis PY-89]
gi|420789745|ref|ZP_15260662.1| yrdC domain protein [Yersinia pestis PY-90]
gi|420795246|ref|ZP_15265615.1| hypothetical protein YPPY91_2657 [Yersinia pestis PY-91]
gi|420805687|ref|ZP_15275025.1| hypothetical protein YPPY93_2588 [Yersinia pestis PY-93]
gi|420810999|ref|ZP_15279814.1| yrdC domain protein [Yersinia pestis PY-94]
gi|420816582|ref|ZP_15284836.1| hypothetical protein YPPY95_2596 [Yersinia pestis PY-95]
gi|420821852|ref|ZP_15289583.1| hypothetical protein YPPY96_2510 [Yersinia pestis PY-96]
gi|420826940|ref|ZP_15294143.1| hypothetical protein YPPY98_2544 [Yersinia pestis PY-98]
gi|420832666|ref|ZP_15299320.1| hypothetical protein YPPY99_2697 [Yersinia pestis PY-99]
gi|420837503|ref|ZP_15303691.1| hypothetical protein YPPY100_2525 [Yersinia pestis PY-100]
gi|420842683|ref|ZP_15308385.1| hypothetical protein YPPY101_2504 [Yersinia pestis PY-101]
gi|420848330|ref|ZP_15313464.1| hypothetical protein YPPY102_2579 [Yersinia pestis PY-102]
gi|420853854|ref|ZP_15318226.1| hypothetical protein YPPY103_2713 [Yersinia pestis PY-103]
gi|421763703|ref|ZP_16200496.1| hypothetical protein INS_11515 [Yersinia pestis INS]
gi|21958883|gb|AAM85617.1|AE013807_11 hypothetical protein y2053 [Yersinia pestis KIM10+]
gi|45436671|gb|AAS62225.1| Putative translation factor (SUA5) [Yersinia pestis biovar Microtus
str. 91001]
gi|51589742|emb|CAH21372.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108775489|gb|ABG18008.1| translation factor SUA5 [Yersinia pestis Nepal516]
gi|108779478|gb|ABG13536.1| translation factor SUA5 [Yersinia pestis Antiqua]
gi|115347919|emb|CAL20841.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209916|gb|ABP39323.1| translation factor SUA5 [Yersinia pestis Pestoides F]
gi|149292282|gb|EDM42356.1| hypothetical protein YPE_1047 [Yersinia pestis CA88-4125]
gi|152960783|gb|ABS48244.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pseudotuberculosis IP
31758]
gi|165913822|gb|EDR32440.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920677|gb|EDR37925.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990465|gb|EDR42766.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207705|gb|EDR52185.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961973|gb|EDR57994.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049698|gb|EDR61106.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167056233|gb|EDR66011.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169750809|gb|ACA68327.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pseudotuberculosis
YPIII]
gi|186698535|gb|ACC89164.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pseudotuberculosis
PB1/+]
gi|229681039|gb|EEO77134.1| predicted RNA-binding protein [Yersinia pestis Nepal516]
gi|229688574|gb|EEO80643.1| predicted RNA-binding protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229693976|gb|EEO84025.1| predicted RNA-binding protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701991|gb|EEO90012.1| predicted RNA-binding protein [Yersinia pestis Pestoides A]
gi|262362130|gb|ACY58851.1| hypothetical protein YPD4_1944 [Yersinia pestis D106004]
gi|262365459|gb|ACY62016.1| hypothetical protein YPD8_1331 [Yersinia pestis D182038]
gi|270339121|gb|EFA49898.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis KIM D27]
gi|294354209|gb|ADE64550.1| hypothetical protein YPZ3_1640 [Yersinia pestis Z176003]
gi|320014877|gb|ADV98448.1| putative RNA-binding protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342855089|gb|AEL73642.1| hypothetical protein A1122_15090 [Yersinia pestis A1122]
gi|391427360|gb|EIQ89450.1| hypothetical protein YPPY02_2546 [Yersinia pestis PY-02]
gi|391428437|gb|EIQ90418.1| hypothetical protein YPPY03_2599 [Yersinia pestis PY-03]
gi|391441108|gb|EIR01621.1| hypothetical protein YPPY04_2581 [Yersinia pestis PY-04]
gi|391442963|gb|EIR03328.1| hypothetical protein YPPY05_2549 [Yersinia pestis PY-05]
gi|391446288|gb|EIR06346.1| hypothetical protein YPPY06_2607 [Yersinia pestis PY-06]
gi|391461488|gb|EIR20093.1| hypothetical protein YPPY09_2612 [Yersinia pestis PY-09]
gi|391474345|gb|EIR31642.1| hypothetical protein YPPY10_2624 [Yersinia pestis PY-10]
gi|391476034|gb|EIR33187.1| hypothetical protein YPPY11_2690 [Yersinia pestis PY-11]
gi|391476713|gb|EIR33810.1| hypothetical protein YPPY12_2728 [Yersinia pestis PY-12]
gi|391490317|gb|EIR45981.1| hypothetical protein YPPY13_2599 [Yersinia pestis PY-13]
gi|391491459|gb|EIR47015.1| hypothetical protein YPPY15_2544 [Yersinia pestis PY-15]
gi|391493478|gb|EIR48829.1| yrdC domain protein [Yersinia pestis PY-14]
gi|391505830|gb|EIR59808.1| hypothetical protein YPPY16_2603 [Yersinia pestis PY-16]
gi|391506830|gb|EIR60724.1| hypothetical protein YPPY19_2565 [Yersinia pestis PY-19]
gi|391521686|gb|EIR74141.1| hypothetical protein YPPY29_2440 [Yersinia pestis PY-29]
gi|391524074|gb|EIR76339.1| hypothetical protein YPPY34_2580 [Yersinia pestis PY-34]
gi|391525090|gb|EIR77256.1| hypothetical protein YPPY32_2850 [Yersinia pestis PY-32]
gi|391537189|gb|EIR88103.1| hypothetical protein YPPY36_2717 [Yersinia pestis PY-36]
gi|391539923|gb|EIR90606.1| hypothetical protein YPPY42_2612 [Yersinia pestis PY-42]
gi|391541784|gb|EIR92301.1| yrdC domain protein [Yersinia pestis PY-45]
gi|391555045|gb|EIS04242.1| hypothetical protein YPPY46_2562 [Yersinia pestis PY-46]
gi|391555572|gb|EIS04736.1| hypothetical protein YPPY47_2667 [Yersinia pestis PY-47]
gi|391556587|gb|EIS05658.1| hypothetical protein YPPY48_2613 [Yersinia pestis PY-48]
gi|391570265|gb|EIS17754.1| hypothetical protein YPPY52_2623 [Yersinia pestis PY-52]
gi|391570933|gb|EIS18348.1| hypothetical protein YPPY53_2632 [Yersinia pestis PY-53]
gi|391578491|gb|EIS24751.1| yrdC domain protein [Yersinia pestis PY-54]
gi|391583531|gb|EIS29181.1| hypothetical protein YPPY55_2560 [Yersinia pestis PY-55]
gi|391586545|gb|EIS31836.1| hypothetical protein YPPY56_2633 [Yersinia pestis PY-56]
gi|391598144|gb|EIS41903.1| hypothetical protein YPPY58_2625 [Yersinia pestis PY-58]
gi|391599688|gb|EIS43284.1| hypothetical protein YPPY60_2585 [Yersinia pestis PY-60]
gi|391601549|gb|EIS44966.1| hypothetical protein YPPY59_2630 [Yersinia pestis PY-59]
gi|391614895|gb|EIS56723.1| hypothetical protein YPPY63_2620 [Yersinia pestis PY-63]
gi|391619660|gb|EIS60904.1| hypothetical protein YPPY64_2644 [Yersinia pestis PY-64]
gi|391626708|gb|EIS67021.1| hypothetical protein YPPY65_2601 [Yersinia pestis PY-65]
gi|391635214|gb|EIS74402.1| hypothetical protein YPPY66_2814 [Yersinia pestis PY-66]
gi|391637785|gb|EIS76663.1| hypothetical protein YPPY71_2384, partial [Yersinia pestis PY-71]
gi|391640266|gb|EIS78840.1| hypothetical protein YPPY72_2609 [Yersinia pestis PY-72]
gi|391649849|gb|EIS87199.1| hypothetical protein YPPY76_2401 [Yersinia pestis PY-76]
gi|391654064|gb|EIS90931.1| hypothetical protein YPPY88_2596 [Yersinia pestis PY-88]
gi|391658979|gb|EIS95331.1| hypothetical protein YPPY89_2783 [Yersinia pestis PY-89]
gi|391662718|gb|EIS98625.1| yrdC domain protein [Yersinia pestis PY-90]
gi|391670554|gb|EIT05579.1| hypothetical protein YPPY91_2657 [Yersinia pestis PY-91]
gi|391680262|gb|EIT14328.1| hypothetical protein YPPY93_2588 [Yersinia pestis PY-93]
gi|391682333|gb|EIT16220.1| yrdC domain protein [Yersinia pestis PY-94]
gi|391694032|gb|EIT26733.1| hypothetical protein YPPY95_2596 [Yersinia pestis PY-95]
gi|391697283|gb|EIT29687.1| hypothetical protein YPPY96_2510 [Yersinia pestis PY-96]
gi|391698797|gb|EIT31059.1| hypothetical protein YPPY98_2544 [Yersinia pestis PY-98]
gi|391709167|gb|EIT40368.1| hypothetical protein YPPY99_2697 [Yersinia pestis PY-99]
gi|391714812|gb|EIT45439.1| hypothetical protein YPPY100_2525 [Yersinia pestis PY-100]
gi|391715390|gb|EIT45945.1| hypothetical protein YPPY101_2504 [Yersinia pestis PY-101]
gi|391726053|gb|EIT55449.1| hypothetical protein YPPY102_2579 [Yersinia pestis PY-102]
gi|391729548|gb|EIT58535.1| hypothetical protein YPPY103_2713 [Yersinia pestis PY-103]
gi|411175801|gb|EKS45825.1| hypothetical protein INS_11515 [Yersinia pestis INS]
Length = 206
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDALGEPLMSTTLMLPGNDFAESDPEEIKENLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSAPEVIREGAG 200
>gi|417957081|ref|ZP_12600009.1| hypothetical protein l13_04160 [Neisseria weaveri ATCC 51223]
gi|343969085|gb|EGV37304.1| hypothetical protein l13_04160 [Neisseria weaveri ATCC 51223]
Length = 206
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 18/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++++G V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIIRKGGVVAYPTDSCYALGCHLGDKDAMERILRIRQIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L ++ PL+S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNKIALALLAELGEPLLSCTLMLPEDEEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT ++IR+GKG
Sbjct: 167 SVDLVIDGGWCGMEPTTVIDMTDGV-ELIREGKG 199
>gi|238788419|ref|ZP_04632212.1| hypothetical protein yfred0001_830 [Yersinia frederiksenii ATCC
33641]
gi|238723332|gb|EEQ14979.1| hypothetical protein yfred0001_830 [Yersinia frederiksenii ATCC
33641]
Length = 206
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKSAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKEHLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSSPEVIREGAG 200
>gi|423317217|ref|ZP_17295122.1| Sua5/YciO/YrdC/YwlC family protein [Bergeyella zoohelcum ATCC
43767]
gi|405581689|gb|EKB55703.1| Sua5/YciO/YrdC/YwlC family protein [Bergeyella zoohelcum ATCC
43767]
Length = 203
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 121/215 (56%), Gaps = 20/215 (9%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ +P +L V+++L G + + P+DT+YA+ C++ A+++L IK ++ K
Sbjct: 5 IRINPDNPQERQLNQVIDVLNSGGIIIFPSDTVYAMGCNIHHPKAMKKLADIKGIKLEKA 64
Query: 63 -LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
SI+C +L + +T ++IFR +K LPGP+TFIL A K +P
Sbjct: 65 KFSIVCNNLSHLSEFTKPI-------DSSIFRLLKQHLPGPFTFILEAGKALP------- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGP 180
A Y K +G+R+P+ +I Q I++ + +P+ STS+K + E+ DP +IA+ +
Sbjct: 111 ---AAYKGHKTIGIRVPDHSIPQKIVELLGSPIASTSIKDEDEIIEYTTDPELIAEKFD- 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+D G STV+D+T P+IIRQGKG
Sbjct: 167 KMVDIVIDAGYGGNIASTVIDLTSGEPEIIRQGKG 201
>gi|91786903|ref|YP_547855.1| Sua5/YciO/YrdC/YwlC [Polaromonas sp. JS666]
gi|91696128|gb|ABE42957.1| Sua5/YciO/YrdC/YwlC [Polaromonas sp. JS666]
Length = 215
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 116/222 (52%), Gaps = 25/222 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P L+ V LL G V VPTD+ YA+VC L +A + LRRI+ V+
Sbjct: 4 FFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + FR +K PGPYTFIL ASKEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNKQ----FRLLKAATPGPYTFILEASKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-KDN---EWMVDPVVIADT 177
+ RK +G+R+P QA+L+ APL++T++ DN E + D I D
Sbjct: 112 ----SHPSRKTIGLRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLNDARDIRDQ 167
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
E L V+D G P+TV+D+T G P ++RQG+G
Sbjct: 168 LEHE-LAAVIDAGACHQAPTTVIDLTPMGEGGEPVVVRQGRG 208
>gi|419798713|ref|ZP_14324110.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sicca VK64]
gi|385694146|gb|EIG24770.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sicca VK64]
Length = 227
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 25 FFAIHPDNPQERLIKQAADIVRNGGVIVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 84
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 85 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 133
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 134 -----HPKRKTIGLRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 187
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 188 SVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 220
>gi|153875764|ref|ZP_02003416.1| translation factor [Beggiatoa sp. PS]
gi|152067772|gb|EDN66584.1| translation factor [Beggiatoa sp. PS]
Length = 208
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V+++K+G V V PTD+ YA+ C + +A+ER+ I+ + +
Sbjct: 4 FFTIHPQNPQQRLISQTVDIIKKGGVIVYPTDSSYALGCYMGDKAAMERISFIRQTDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR+ +I TY + FR +K PGPYTFIL A+ EVP++
Sbjct: 64 NFTLVCRAFSEIGTY--------ANVNNTAFRLMKSLTPGPYTFILKATNEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +GVR+P+ +I QAI++ + PL+S+++ +P I + +
Sbjct: 112 ----QNPKRKTIGVRVPDHSIVQAIVEMLGEPLMSSTLIMPGKETPETEPDTIKELLQKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D ++DGG E +T+VDM P+I+RQGKGP
Sbjct: 168 -VDLIIDGGNCGFEATTIVDMMTESPQILRQGKGP 201
>gi|225075954|ref|ZP_03719153.1| hypothetical protein NEIFLAOT_00979 [Neisseria flavescens
NRL30031/H210]
gi|224952669|gb|EEG33878.1| hypothetical protein NEIFLAOT_00979 [Neisseria flavescens
NRL30031/H210]
Length = 206
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQDRLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKNAMERILTIRKIDQKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++A A+LQ++ P++S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNATALALLQELGEPILSCTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 AVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 199
>gi|423342713|ref|ZP_17320427.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides johnsonii
CL02T12C29]
gi|409216968|gb|EKN09947.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides johnsonii
CL02T12C29]
Length = 202
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 124/221 (56%), Gaps = 21/221 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ P + +++ VV ++++G + + PTDT+YAI CD + A+E++ ++K V P
Sbjct: 1 MLVKIYPENPNLREIDKVVNIMRDGGLVIYPTDTVYAIGCDALNVRAVEKICQMKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + F+ +K LPG +TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNAAFKLMKKNLPGAFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
Y RK VG+R+P++ I + +++++ P+++ S+ D E+ DP +I + Y
Sbjct: 109 ------IYKNRKEVGIRVPDNTIIRTLVRELGNPILTMSLHDEDDIIEYSTDPELIEEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLY 219
+ +D V+DGG E STV+D T +IIRQGKG +Y
Sbjct: 163 ENQ-VDIVIDGGYGGTEASTVIDCTTDDFEIIRQGKGELIY 202
>gi|428778482|ref|YP_007170268.1| Sua5/YciO/YrdC/YwlC family protein [Dactylococcopsis salina PCC
8305]
gi|428692761|gb|AFZ48911.1| Sua5/YciO/YrdC/YwlC family protein [Dactylococcopsis salina PCC
8305]
Length = 214
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 22/206 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
LE V + LK+GA+ + PTDT+YAI CDL + SA+E++R +K + KPL+ LC SL +I
Sbjct: 17 LETVSQALKDGAIMLYPTDTVYAIGCDLNAKSAVEKVRSLKRMSNEKPLTFLCSSLSNIA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
Y + +R +K +PGPYTF+L A+K VP+ + RK G
Sbjct: 77 DY--------ARVSDPAYRLMKRLIPGPYTFLLPATKSVPRLVMN--------PKRKTTG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVV-----DG 189
+R+P+ +CQ IL+ + P+ISTS +L D+ + + + LD +V DG
Sbjct: 121 IRVPHHNLCQGILESLGNPIISTSA-YLPDDMGDLPTLGYEKARLFDVLDKLVDIILDDG 179
Query: 190 GVRVAEPSTVVDMTGTYPKIIRQGKG 215
E ST++D+T P+IIR+G G
Sbjct: 180 SELQTEVSTILDLTEDEPQIIREGLG 205
>gi|317492214|ref|ZP_07950643.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919553|gb|EFV40883.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 18/215 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S + VE+L++G V V PTD+ YA+ C L +A+ER+ RI+N++ + +++
Sbjct: 9 PDNPQSRLISQCVEVLRKGGVIVYPTDSGYALGCMLGEKNAMERICRIRNLDSNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSEISTYAF--------VDNTAFRLIKNNTPGHYTFILKATKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L + PL+ST++ ++ DP I D G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIALDLLAALGEPLMSTTLMLPGNDFAESDPEEIQDALG-KVVDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLYW 220
+ GG +P+TV+D+T P+++R G G PK +
Sbjct: 172 IHGGFLGQQPTTVIDLTEDSPEVVRVGAGDPKPFM 206
>gi|294635973|ref|ZP_06714415.1| Sua5/YciO/YrdC/YwlC family protein [Edwardsiella tarda ATCC 23685]
gi|451964665|ref|ZP_21917928.1| hypothetical protein ET1_04_00370 [Edwardsiella tarda NBRC 105688]
gi|291090702|gb|EFE23263.1| Sua5/YciO/YrdC/YwlC family protein [Edwardsiella tarda ATCC 23685]
gi|451316557|dbj|GAC63290.1| hypothetical protein ET1_04_00370 [Edwardsiella tarda NBRC 105688]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 122/210 (58%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VV++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PENPQPRLIKQVVDILRKGGVIVYPTDSGYALGCMLEEKNAMERICRIRRIDSNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y FR +K+ PG YTFIL ASKEVP++ +
Sbjct: 69 CRDLSELSSYAF--------VDNAAFRLLKNNTPGGYTFILKASKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L ++ PL+ST++ L D+E+ DP I + G + +D
Sbjct: 114 -EKRKTIGLRVPSNPIAQDLLAELGEPLMSTTL-MLPDSEFAESDPEEIQERLG-KLVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+ GG +P+TV+DMT P+++R G G
Sbjct: 171 VIHGGYLGQQPTTVIDMTDDNPQVVRVGSG 200
>gi|170722951|ref|YP_001750639.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida W619]
gi|169760954|gb|ACA74270.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida W619]
Length = 221
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ +
Sbjct: 16 FFQIHPENPQPRLIRQAVEIIRKGGVVVYPTDSAYALGCQIGDKAAIERVRRLRGLDKTH 75
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 76 NFTLMCCDMSQLGLYA--------KVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 124
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L ++ PL+S S+ D+E M DP I +
Sbjct: 125 -----HEKRRTIGLRVPDHGITLALLAELGEPLMSVSLILPGDSEPMTDPYEIRERL-EH 178
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P++IR+G G
Sbjct: 179 HVDLVIDGGFGDLKASTIIDLSGDEPEVIREGCG 212
>gi|429754000|ref|ZP_19286755.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429170887|gb|EKY12547.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLRHGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRALPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+P++ I + I++K+ P++STS+ + D+ E+ DP +I + + +D V+DGG
Sbjct: 123 VPDNTIARTIVEKLGNPIVSTSI-YDDDDVIEYTTDPELIFEKW-QNRVDIVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P ++R+GKG
Sbjct: 181 VASTVIDLSGDTPVVLREGKG 201
>gi|329894513|ref|ZP_08270327.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium IMCC3088]
gi|328923038|gb|EGG30363.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium IMCC3088]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ ++++ G + V PTD+ YA+ C + A++ +RRI+ ++
Sbjct: 4 FFQIHPDNPQARLIKQAADIIRAGGIVVYPTDSAYALGCHIGDKRALDTIRRIRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ F R D +R +K PGPYTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSEL----ANFARVDNAA----YRLLKAATPGPYTFILKATPEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P + I QA+L +++ P++S ++ D + ++DP I D
Sbjct: 113 -----HAKRKTIGLRVPENNIAQALLAELNEPMMSVTLIMPDDEDPLIDPYEIRDLL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E +TV+D+ P ++RQGKG
Sbjct: 167 DVDLVIDGGYCGLEMTTVIDLADDEPVLVRQGKG 200
>gi|288575494|ref|ZP_05977046.2| Sua5/YciO/YrdC/YwlC family protein [Neisseria mucosa ATCC 25996]
gi|288567761|gb|EFC89321.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria mucosa ATCC 25996]
Length = 227
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 25 FFAIHPDNPQERLIKQATDIVRSGGVVVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 84
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 85 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 133
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 134 -----HPKRKTIGLRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 187
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 188 AVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 220
>gi|319943942|ref|ZP_08018222.1| Sua5/YciO/YrdC/YwlC family protein [Lautropia mirabilis ATCC 51599]
gi|319742703|gb|EFV95110.1| Sua5/YciO/YrdC/YwlC family protein [Lautropia mirabilis ATCC 51599]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + V E + GA+ +PTD Y + C L+ +A++R+R+++ ++
Sbjct: 4 IEIHPVNPQPRLIRQVAEQFQTGALVALPTDASYVLACHLEDRTAVDRMRQLRGIDEKHL 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L++LCR L ++ Y Q FR +K PG YTFIL A++EVP++ +
Sbjct: 64 LTLLCRDLSELSQY--------AQVDNRQFRFLKEWTPGAYTFILPATREVPRRLM---- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+ RK VG+R+P I QA+L ++ PL+ S+ D + DP I D G +
Sbjct: 112 ----HPSRKTVGLRVPEAPIVQALLAELGVPLLCASLILPGDENPLSDPDDIEDRIG-KR 166
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D +VDGG E ++V+D+TG P I R G GP
Sbjct: 167 IDLLVDGGAGQLEATSVIDVTGDEPVIQRVGLGP 200
>gi|365959460|ref|YP_004941027.1| translation factor [Flavobacterium columnare ATCC 49512]
gi|365736141|gb|AEW85234.1| translation factor [Flavobacterium columnare ATCC 49512]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 122/217 (56%), Gaps = 20/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + ++ V+++L+EG + + PTDT+Y + CD+ + A+ER+ +IK V+
Sbjct: 3 QFLKIYPQNPNEKEIAKVIKILREGGLIIYPTDTVYGLGCDITNTKALERIAKIKGVKLE 62
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L I Y Q + F+ +K LPGPYTFIL + +PK
Sbjct: 63 KANFSFVCSDLSHISDYIK-------QIDTSTFKILKRALPGPYTFILPGNNNLPK---- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
++ R VG+R+P+++I I++++ P++STS+ + E+ DP +I + +
Sbjct: 112 ------EFKKRTTVGIRVPDNSIAIEIVKQLGNPIVSTSIHDEDEIIEYTTDPELIFEKW 165
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG STV+D++G P++IR+GKG
Sbjct: 166 -QNIVDLVIDGGYGDNHASTVIDLSGLEPEVIREGKG 201
>gi|288941908|ref|YP_003444148.1| Sua5/YciO/YrdC/YwlC family protein [Allochromatium vinosum DSM 180]
gi|288897280|gb|ADC63116.1| Sua5/YciO/YrdC/YwlC family protein [Allochromatium vinosum DSM 180]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE+L EG V V PTD+ YA+ C + SA+ER+RRI+ ++
Sbjct: 4 FFQIHPDNPQPRLIRRAVEILLEGGVIVYPTDSSYALGCQIGEKSAMERIRRIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I +Y + D Q +R +K PG YTFI A+K+VP++ +
Sbjct: 64 NFTLVCRDLSEIASYA----KIDDQA----YRMLKSLTPGAYTFIHEATKQVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ IC+A+L ++D P++ST++ +E + DP + + +
Sbjct: 113 -----HPKRKAIGLRVPDNEICRALLGELDQPILSTTLILPDHDEPLTDPYDMREALD-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D ++DGG EP+TVVDMT P ++R+GKG + E
Sbjct: 167 HVDLIIDGGFCGLEPTTVVDMTADPPALVRRGKGDASLFEE 207
>gi|431803754|ref|YP_007230657.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida HB3267]
gi|430794519|gb|AGA74714.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida HB3267]
Length = 209
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + +AIER+RR++ ++ +
Sbjct: 4 FFQIHPENPQQRLIKQAVEIIRKGGVVVYPTDSAYALGCQMGDKAAIERVRRLRGLDKTH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Y + FR +K +PGPYTFIL ++EVP+ +
Sbjct: 64 NFTLMCCDMSQLGLY--------AKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P AI A+L ++ PL+S S+ D E M DP I +
Sbjct: 113 -----HDKRRTIGLRVPAHAITLALLAELGEPLMSVSLILPGDFEPMTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG + ST++D++G P+++R+G G
Sbjct: 167 HVDLVIDGGFGDLKASTIIDLSGDEPELVREGCG 200
>gi|238763131|ref|ZP_04624097.1| hypothetical protein ykris0001_40700 [Yersinia kristensenii ATCC
33638]
gi|238698630|gb|EEP91381.1| hypothetical protein ykris0001_40700 [Yersinia kristensenii ATCC
33638]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKAAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKENLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSSPEVIREGAG 200
>gi|114319880|ref|YP_741563.1| translation factor SUA5 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226274|gb|ABI56073.1| translation factor SUA5 [Alkalilimnicola ehrlichii MLHE-1]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P ++ VE+++ G V PTD+ YA+ C + A++R+R+I+ +
Sbjct: 4 YFEIHPVTPQVRLVKRTVEIIRAGGVIAYPTDSSYALGCGIGEKQAVDRIRQIRRLREDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L DI TY + +R +K PGPYTFIL A+ +VP+
Sbjct: 64 NFTLACRDLSDIGTY--------ARVENYAYRLLKSHTPGPYTFILKATSKVPRLL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K +G+R+P+ QAIL+++ PL++ S+ D+ + DPV I +
Sbjct: 112 ----QHPKKKTIGIRVPDHPTTQAILEELGEPLMTVSLIMPDDDMPITDPVDIRAALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTVVD++G P+++R+G G
Sbjct: 168 -VDAVIDGGPGGLEPSTVVDLSGEAPRVLREGAG 200
>gi|148263967|ref|YP_001230673.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter uraniireducens Rf4]
gi|146397467|gb|ABQ26100.1| translation factor SUA5 [Geobacter uraniireducens Rf4]
Length = 202
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + VVE+L +G V PTDT Y I C + + IER+ IK E
Sbjct: 1 MLLEINPQNPQPRLVAQVVEVLNKGGVVAYPTDTTYGIGCSIFNKRGIERIYSIKQREKK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L DI Y + F+ +K LPGPYTF+L A+ VP +
Sbjct: 61 KPFSFICADLSDIARY--------AKVSNYAFKLMKRLLPGPYTFVLDATSVVPDLLM-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP + IC A+++++ P+++TS L E + DP + ++Y
Sbjct: 111 -------TKQKTVGIRIPANKICLAVVKQLGHPIVTTSAN-LSGEEPIGDPFQV-ESYLG 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG+ A+ S+VV + G P+++R+G G
Sbjct: 162 KLIDLTIDGGILSADVSSVVSLIGDVPEVLRKGVG 196
>gi|343085590|ref|YP_004774885.1| Sua5/YciO/YrdC/YwlC family protein [Cyclobacterium marinum DSM 745]
gi|342354124|gb|AEL26654.1| Sua5/YciO/YrdC/YwlC family protein [Cyclobacterium marinum DSM 745]
Length = 209
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 124/217 (57%), Gaps = 19/217 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++++ P D K+ V+++L++G V + PTDT+Y + CD+ + AIER+ IK V+P
Sbjct: 4 VFIKLYPENPDPRKISQVIDVLQKGGVIIYPTDTVYGMGCDIFNQKAIERIGLIKGVKPK 63
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L +I YT +F+ +K LPGP+TFIL A+ +VPK
Sbjct: 64 KEHFSFICYDLSNISEYTRSL-------STPVFKLMKKALPGPFTFILAANNKVPKLL-- 114
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
S +K VG+R+P+ +I + +++++ P+++TS++ D E+ DP +I + Y
Sbjct: 115 -------NSKKKTVGIRVPDHSIPRLLVKELGQPILTTSIRDEDDVIEYSTDPELIYEKY 167
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STVVD + ++IR+G G
Sbjct: 168 -KDLVDVVIDGGYGNNVASTVVDCSSDQIEVIREGLG 203
>gi|410636893|ref|ZP_11347484.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
lipolytica E3]
gi|410143699|dbj|GAC14689.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
lipolytica E3]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P L E+++ G V V PTD+ YAI C ++ SA+E++ RI+ +
Sbjct: 4 YFYVHPENPQQRLLRQACEIIRAGGVIVYPTDSGYAIGCQMEDKSALEKICRIRQIGKEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + ++ Y R D FR +K+ PGPYTFIL A+KEVPK+
Sbjct: 64 NFTLMCRDMSELSNYA----RVDNTA----FRLIKNNTPGPYTFILKATKEVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I +L++++ PL+ST++ + + DP I D +
Sbjct: 112 ----QNPKRKTIGIRVPDNIIALQLLEELNEPLMSTTLILPGETQAEFDPDEIRDKLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P++V+DM+ IIR+G G
Sbjct: 168 -VDLIINGGYLGEQPTSVIDMSEGGIDIIREGSG 200
>gi|378579796|ref|ZP_09828458.1| putative RNA-binding protein [Pantoea stewartii subsp. stewartii
DC283]
gi|377817663|gb|EHU00757.1| putative RNA-binding protein [Pantoea stewartii subsp. stewartii
DC283]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE L +G V V PTD+ YA+ C L+ A+ER+ I+ ++ +++
Sbjct: 9 PDNPQPRLINQAVEYLNKGGVIVYPTDSGYALGCRLEEKGAMERICPIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I + G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPVALALLEALNEPMMSTSLILPGNDFTESDPEDIQHSIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+DGG +P+TV+D+T P+I+R+G G +M
Sbjct: 172 IDGGTLGQQPTTVIDLTSDAPEIVREGAGDTTPFM 206
>gi|416853911|ref|ZP_11910523.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa 138244]
gi|334844594|gb|EGM23166.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa 138244]
gi|453047784|gb|EME95498.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family protein
[Pseudomonas aeruginosa PA21_ST175]
Length = 209
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 121/221 (54%), Gaps = 17/221 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + A++R+RRI+ ++
Sbjct: 4 FFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKPAVDRIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PGPYTFIL+A++EVP+ +
Sbjct: 64 NFTLVCRDLSELGVYA--------KVDTGLFRLLKAHTPGPYTFILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I +A+L+++ PL+S S+ E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+D +VDGG E STV+ +T T P++IR G G +M+
Sbjct: 168 -VDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQ 207
>gi|338535114|ref|YP_004668448.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus fulvus HW-1]
gi|337261210|gb|AEI67370.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus fulvus HW-1]
Length = 203
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E D ++ VE+L+ G + PTDT + + CDL S IERL ++K + KP
Sbjct: 6 LEVDMEHPSPRHIQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS LC L D+ Y H + F R +K PG +TFIL A++ VP +
Sbjct: 66 LSFLCPDLSDVARY----------AHVSNFAYRTMKSLTPGAFTFILEATRLVPDLMM-- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P+ A+ + + + + PL++TS + E + D I G
Sbjct: 114 -------SKQKQVGIRVPDSALVRELARALGRPLVTTSATN-TEGEPLTDAKDIKAELG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLD ++DGGV + EPSTV+ + G +I+RQGKG
Sbjct: 165 HGLDLILDGGVTLNEPSTVISLIGDSLEILRQGKG 199
>gi|53803488|ref|YP_114629.1| Sua5/YciO/YrdC/YwlC family protein [Methylococcus capsulatus str.
Bath]
gi|53757249|gb|AAU91540.1| Sua5/YciO/YrdC/YwlC family protein [Methylococcus capsulatus str.
Bath]
Length = 207
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E + E++++G V V PTD+ YA C L A+ R+R I+ ++
Sbjct: 4 YFEVHSHTPQQRLIRQAAEIVRQGGVIVYPTDSSYAFGCQLDRKDALHRIRTIRQLDEEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + F R + + FR +K PGPYTF+L A++EVP++
Sbjct: 64 NFTLICHDLSQV----SAFARINNEA----FRLIKTLTPGPYTFLLEATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P++A+ Q ++ ++ PL S+++ + E + DP I + G
Sbjct: 112 ----QHPKRKTIGIRLPDNAVSQMLVAELGEPLFSSTLILPGETEGLADPEDIRERVGTR 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++ GV +T+VD+TG +P I+RQGKG
Sbjct: 168 -VELILAAGVIPFAETTIVDLTGEFPVIVRQGKG 200
>gi|406676243|ref|ZP_11083429.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AMC35]
gi|423202377|ref|ZP_17188956.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AER39]
gi|423207489|ref|ZP_17194045.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AMC34]
gi|404615529|gb|EKB12501.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AER39]
gi|404620556|gb|EKB17453.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AMC34]
gi|404626466|gb|EKB23276.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AMC35]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++++ G V V PTD+ YA+ C + A+ER+ RI+ ++ + +++
Sbjct: 9 PENPQARLIGQAVQIIQNGGVIVYPTDSGYALGCQMGDKGALERICRIRRLDANHDFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + + FR +K+ PG YTFI A+KEVP++ +
Sbjct: 69 CRDLSEISTY--------AKVDNSAFRLIKNNTPGAYTFIFKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDF 185
+K +G+R+P++ I QA+L+ + PL+ST++ L D+E DP I D G + +D
Sbjct: 114 -EKKKSIGIRVPDNKIAQALLEALGEPLLSTTL-ILPDSEMAEFDPEEIFDKLGKQ-IDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
VV+GG +P+TVVD + P + R+G G
Sbjct: 171 VVNGGYLGEQPTTVVDFSDDEPVLRRRGAG 200
>gi|332708684|ref|ZP_08428656.1| translation factor SUA5 [Moorea producens 3L]
gi|332352538|gb|EGJ32106.1| translation factor SUA5 [Moorea producens 3L]
Length = 213
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 117/207 (56%), Gaps = 22/207 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
++E + E L++GAV + PTDT+YAI CD+ SA++R+RR+K + KPL+ LC SL +I
Sbjct: 16 RIEKIRESLEDGAVMLYPTDTVYAIGCDVHVKSAVQRVRRLKQLSNDKPLTFLCSSLSNI 75
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + +R +KH +PGPYTF+L A+K VPK + RK
Sbjct: 76 AKY--------ARVSDPAYRIMKHLIPGPYTFLLPATKLVPKLVMSPN--------RKTT 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV-R 192
G+R+P+ +CQA+L + P+ISTS L + + V + + LD +VD V
Sbjct: 120 GIRVPDHNVCQALLSALGHPIISTSAH-LPNQDGDTPTVGLERAKLFDALDGLVDIIVDN 178
Query: 193 VAEP----STVVDMTGTYPKIIRQGKG 215
EP ST++D+T + P ++RQG G
Sbjct: 179 DLEPGFQVSTILDLTSSEPMMVRQGLG 205
>gi|86607002|ref|YP_475765.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. JA-3-3Ab]
gi|86555544|gb|ABD00502.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. JA-3-3Ab]
Length = 235
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 31/229 (13%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + ++ + L+EGAV + PTDT+YAI CD+ A+ER+RR+K + K
Sbjct: 4 YFKLHPQHPQARSIQRIAAALREGAVMLYPTDTVYAIGCDVTHKQAVERVRRLKRLSNDK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL I Y Q +R ++ +PGP+TF+L A+K VPK +
Sbjct: 64 PLTFLCPSLSQIAQY--------AQVSDPAYRLMRRLIPGPFTFLLPATKLVPKLVMD-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD------------NEWMV 169
RK G+R+P+ AICQA+L ++ P++STS K D +W
Sbjct: 114 ------PKRKTTGIRVPDSAICQALLAELGNPIVSTSAKLGGDPVGSLEVGFDSAGDWEE 167
Query: 170 DPVVIADTYGP--EGLDFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKG 215
+ A+ + +D V+D A+ STV+D+TG P ++R G G
Sbjct: 168 GGIFTAEEMRQLEKQVDLVLDDEAPYRAQVSTVIDLTGPEPLLVRAGLG 216
>gi|359729037|ref|ZP_09267733.1| Sua5 family translation factor [Leptospira weilii str. 2006001855]
gi|398332033|ref|ZP_10516738.1| Sua5 family translation factor [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 202
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISNNLLEGNVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKRITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +LQ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLQVHPNPLTSTSV--FANDEFIIEVDLLERVYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MTG I+R+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILNMTGDKMAIVREGKG 198
>gi|410096296|ref|ZP_11291284.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides goldsteinii
CL02T12C30]
gi|409226633|gb|EKN19540.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides goldsteinii
CL02T12C30]
Length = 201
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + +++ V+++L++G + + PTDT+YAI CD + A+E++ ++K + P
Sbjct: 1 MLIKIYPENPNPREIDKVIDVLRDGGLVIYPTDTVYAIGCDALNVRAVEKICQMKGINPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + + F+ +K LPGP+TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNSAFKLMKKNLPGPFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTY 178
Y RK VG+R+P++ I + +++++ P+++ SV D E+ DP +I + Y
Sbjct: 109 ------IYKNRKEVGIRVPDNNIIRTLVKELGNPILTMSVHDDDDVIEYSTDPELIHEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E STVVD T I+RQGKG
Sbjct: 163 -ENTVDIVIDGGYGGFEASTVVDCTTDEFGIVRQGKG 198
>gi|344204526|ref|YP_004789669.1| Sua5/YciO/YrdC/YwlC family protein [Muricauda ruestringensis DSM
13258]
gi|343956448|gb|AEM72247.1| Sua5/YciO/YrdC/YwlC family protein [Muricauda ruestringensis DSM
13258]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 119/204 (58%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++E VV +L++G + + PTDT+Y + CD+ + A++R+ RIK ++ K S +C L +
Sbjct: 16 QVEKVVNVLRKGGLVIYPTDTVYGLGCDITNSKALQRIARIKGIKLEKANWSFICADLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL + +PK + +K
Sbjct: 76 LSDYVR-------QIDGPTFKLLKRTLPGPYTFILPGNNNLPK----------DFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P++AI +A++ ++ P++STS++ D E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNAIARALVSELGHPIVSTSIRDDDDILEYTTDPELIYEKW-QNLVDIVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P++IR+GKG
Sbjct: 178 GDNVASTVIDLSGEEPEVIREGKG 201
>gi|325266594|ref|ZP_08133271.1| Sua5/YciO/YrdC/YwlC family protein [Kingella denitrificans ATCC
33394]
gi|324982037|gb|EGC17672.1| Sua5/YciO/YrdC/YwlC family protein [Kingella denitrificans ATCC
33394]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 18/194 (9%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
+K+G + V+PTD Y + C L +A+ER+ I+ ++ L++LC L ++ TY
Sbjct: 24 IKQGKILVLPTDACYVLCCHLGDKTAMERILAIRQIDLKHHLTLLCADLSELGTY----- 78
Query: 82 RGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDA 141
+ + FR +K PG YTFIL A+KEVP + + + RK +G+R+P++A
Sbjct: 79 ---AKVDNSQFRLLKAATPGAYTFILPATKEVPNRTL--------HPKRKTIGLRVPDNA 127
Query: 142 ICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVD 201
I A+L+++ PL+S ++ +D E + DP I D +D ++DGG +EP+TVVD
Sbjct: 128 IALAVLRELGEPLLSCTLMLPEDEEPLTDPYEIQDRLD-HAVDIIIDGGWCGSEPTTVVD 186
Query: 202 MTGTYPKIIRQGKG 215
MT +++RQGKG
Sbjct: 187 MTDGI-ELVRQGKG 199
>gi|120436667|ref|YP_862353.1| hypothetical protein GFO_2321 [Gramella forsetii KT0803]
gi|117578817|emb|CAL67286.1| protein containing YrdC domain [Gramella forsetii KT0803]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 20/203 (9%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDI 73
+ VVE L++G + + PTDT+Y + CD+ + SA+E++ +IKNV+ K S +C L ++
Sbjct: 17 INKVVETLRKGGLIIYPTDTIYGLGCDITNVSALEKIAQIKNVKLEKANFSFVCEDLSNL 76
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y Q ++ F+ +K LPGPYTFIL +P + +K V
Sbjct: 77 SDYVK-------QIDSSTFKILKRSLPGPYTFILPGGNSLPN----------VFKKKKTV 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGVR 192
G+R+P++ IC+AI+ + P++STS++ + E+ DP +I + + +D V+DGG
Sbjct: 120 GIRVPDNNICRAIVNGLGNPIVSTSIRDEDEVLEYSTDPELIKEKWD-HLVDIVIDGGFG 178
Query: 193 VAEPSTVVDMTGTYPKIIRQGKG 215
STV+D+T P++IR+GKG
Sbjct: 179 DNIASTVIDLTTGEPEVIREGKG 201
>gi|400286838|ref|ZP_10788870.1| Sua5/YciO/YrdC/YwlC [Psychrobacter sp. PAMC 21119]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+ P +E +LL++ + + PTDT YA C L + A+E+L++I+ ++
Sbjct: 4 LYIH--PENPQPRLIEQAADLLRKDQLIIYPTDTSYAFGCRLGAKDALEKLKQIRELDDK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVR 119
++LCR L +I Y N+ F+ +K P P TFIL A+K+VPKK
Sbjct: 62 HQFTLLCRDLSEIANYA---------AVDNVQFKQLKAHTPAPITFILNATKDVPKKLA- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
++ +K +G+R+P++ I QA+L MD P++++S+ ++ + DP I D
Sbjct: 112 -------HAKKKTIGIRVPSNPIAQALLAAMDEPILTSSLILPNRDDILDDPFEIEDLLS 164
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +++ G++ + +T+VDMT + P+IIRQG
Sbjct: 165 NQ-IDGLINAGIKTTKLTTIVDMTSSQPEIIRQGAA 199
>gi|410448172|ref|ZP_11302258.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira sp. Fiocruz
LV3954]
gi|410018071|gb|EKO80117.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira sp. Fiocruz
LV3954]
Length = 202
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG+V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLLEGSVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKVAIIREGKG 198
>gi|413958343|ref|ZP_11397582.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. SJ98]
gi|413940923|gb|EKS72883.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. SJ98]
Length = 209
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V+++K+G + +PTD+ YA+ C L A+ERLRR++ ++ +
Sbjct: 4 FFRIHPDNPQPRLINQAVQIIKDGGLVALPTDSSYALGCHLDDKDAVERLRRVRGIDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + F D Q +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSEL----SNFAMVDNQQ----YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+++++ D E + D I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLEALGEPLLASTLILPPDTEPLNDAEEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+D G AEPSTV+D++ P ++R G+G
Sbjct: 168 -IELVIDAGACPAEPSTVIDLSSGEPVLVRAGRG 200
>gi|427712975|ref|YP_007061599.1| translation factor SUA5 [Synechococcus sp. PCC 6312]
gi|427377104|gb|AFY61056.1| translation factor SUA5 [Synechococcus sp. PCC 6312]
Length = 218
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 18/217 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+E +V+ L+ GAV + PTDT+YAI CDL AI+R+R++K + KPL+ LC SL DI
Sbjct: 17 VEQLVQSLQTGAVLLYPTDTVYAIGCDLNHKGAIQRVRQLKQLSNDKPLTFLCPSLSDIS 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
Y ++ ++ +PGPYTF+L A+K VPK + RK G
Sbjct: 77 RY--------AYVSDPAYKLMRRLIPGPYTFLLGATKLVPK--------LVQNPKRKTTG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P+ AICQA+L + P+ISTS D + D + D + +D ++D +
Sbjct: 121 IRVPDSAICQALLTALGNPIISTSAPLPPDQDHYRDTAELFDRFD-RLVDVIIDAEIVPG 179
Query: 195 EP-STVVDMTGTYPKIIRQGKGPKLYWMEEEDANSTA 230
ST++D PKI+R+G G + ME ++++ A
Sbjct: 180 RAVSTIIDCGVEPPKIVRRGLGWENLPMELQESDELA 216
>gi|56751762|ref|YP_172463.1| hypothetical protein syc1753_d [Synechococcus elongatus PCC 6301]
gi|81301159|ref|YP_401367.1| translation factor SUA5 [Synechococcus elongatus PCC 7942]
gi|56686721|dbj|BAD79943.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81170040|gb|ABB58380.1| translation factor SUA5 [Synechococcus elongatus PCC 7942]
Length = 233
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 39/230 (16%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ + E L++GAV + PTD++YAI CD+K +A++R+RRIK ++ KPL+ +
Sbjct: 9 PDSPQPQQIAAIAEALRQGAVILYPTDSVYAIGCDVKDRAAVQRVRRIKEIDNDKPLTFI 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL Y R FR ++ +PGPYTF+L A+ EVP+ + TA
Sbjct: 69 CPSLSVAAQYGCISDRA--------FRLMRELVPGPYTFLLPATPEVPRVVMNPKRRTA- 119
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW--------LKDNEWMVDPVVIADTY 178
G+RIPN+ ICQA+LQ ++ P+ISTS L + P+ A+ +
Sbjct: 120 -------GIRIPNNPICQALLQALEGPIISTSAHLQPSDRKAPLAYEQGPHCPIAPAELF 172
Query: 179 GPEGLDFVVDGGVRV---------AEP----STVVDMTGTYPKIIRQGKG 215
G +D +VD + V A+P STV+D+T +P ++R+G G
Sbjct: 173 G--EVDRLVDITIEVERQEMRILGADPDYQVSTVLDLTDDWPLVLRRGLG 220
>gi|340361813|ref|ZP_08684227.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria macacae ATCC 33926]
gi|339888233|gb|EGQ77709.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria macacae ATCC 33926]
Length = 227
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 25 FFAIHPDNPQERLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 84
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 85 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 133
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 134 -----HPKRKTIGLRVPDNNIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 187
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 188 SVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 220
>gi|329904391|ref|ZP_08273785.1| hypothetical protein IMCC9480_2045 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547995|gb|EGF32734.1| hypothetical protein IMCC9480_2045 [Oxalobacteraceae bacterium
IMCC9480]
Length = 207
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 17/197 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E++ G + +PTD+ YA+VC L A+ RLRR++ V+ L++LCR L +I Y
Sbjct: 22 EIIHRGGIVAMPTDSSYALVCHLDDKDAVTRLRRLRGVDDKHLLTLLCRDLAEIALYA-- 79
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
+ D + +R +K PG YT IL A+KEVP++ + RK +G+R+P
Sbjct: 80 --KVDNKQ----YRLLKAATPGSYTMILEATKEVPRRI--------SHPSRKTIGLRVPE 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
+ I A+L+++ PL+ T++ D + D + + + +D ++DGG EP+TV
Sbjct: 126 NKIALALLEQLGQPLLGTTLILPGDEHPLTDAESVRERIEKQ-VDLIIDGGACSLEPTTV 184
Query: 200 VDMTGTYPKIIRQGKGP 216
VD++G P +IR G+GP
Sbjct: 185 VDLSGDEPVLIRAGRGP 201
>gi|373488667|ref|ZP_09579331.1| translation factor SUA5 [Holophaga foetida DSM 6591]
gi|372005612|gb|EHP06248.1| translation factor SUA5 [Holophaga foetida DSM 6591]
Length = 201
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 111/216 (51%), Gaps = 19/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P LE ++E+L V PTDTLY + C + A++R+ +K+ +P
Sbjct: 1 MILSLHPDTPQQRHLERILEILTRDGVIAYPTDTLYGLGCLISRKKAVDRILTLKHRDPR 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP+SILC + + Y + FR +K LPGPYT IL AS+EVP RY
Sbjct: 61 KPMSILCADMEMLCRYARHM-------ETSTFRLLKQLLPGPYTVILPASREVP----RY 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
++ VG+RIP++ C AI + P++STS L ++ I + G
Sbjct: 110 ------LQAKQTVGLRIPDNPFCTAITKLAGEPILSTSAN-LYGEPPLLSSWEIQEELG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
LD VVD G V E ST++D+TG P ++RQG GP
Sbjct: 162 HALDMVVDCGEPVGESSTILDLTGDEPLVLRQGAGP 197
>gi|319639149|ref|ZP_07993903.1| hypothetical protein HMPREF0604_01527 [Neisseria mucosa C102]
gi|317399588|gb|EFV80255.1| hypothetical protein HMPREF0604_01527 [Neisseria mucosa C102]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQDRLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKTAMERILTIRKIDQKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++A A+LQ++ P++S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNATALALLQELGEPILSCTLMLPEDEEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 AVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 199
>gi|381204266|ref|ZP_09911337.1| Sua5/YciO/YrdC/YwlC family protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 205
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 124/227 (54%), Gaps = 27/227 (11%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + V+++L+ V + PTDT+Y + C++ S A++++ IK+V+
Sbjct: 1 MLLEINPCNPQPRYINQVIDVLQNDGVIIYPTDTVYGLGCNIYSKKALKKISLIKDVDAK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+ L+ +C SL+ I Y+ G +F+ +K LPGPYTF+ ASK VPK +
Sbjct: 61 RHLTFICSSLQQIQEYSQGIDTA-------VFKILKRHLPGPYTFLFRASKIVPKLLL-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV----KWLKDNEWMVDPVVIAD 176
+ R +GVR P+ I I+ ++ P++S+S+ L DN W I +
Sbjct: 112 -------TKRSTIGVRWPDQIIATQIVSELGNPILSSSLYSGEDHLFDNAWE-----IHE 159
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+G + +D V+DG AE ST++D T P++IR GKG ++ W+++
Sbjct: 160 EFGKQ-VDLVIDGREIFAEHSTIIDFTTDVPEVIRIGKG-QINWLDQ 204
>gi|428215615|ref|YP_007088759.1| translation factor SUA5 [Oscillatoria acuminata PCC 6304]
gi|428003996|gb|AFY84839.1| translation factor SUA5 [Oscillatoria acuminata PCC 6304]
Length = 211
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 20/218 (9%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P K+E VV+ LK+GAV + PTDT+YAI CD+ AIER+R+IK + KPL
Sbjct: 6 EIHPETPQVRKIEEVVDALKKGAVMLYPTDTVYAIGCDITVKGAIERVRQIKRLSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y T +R +K +PGPYTF+L A+K VPK +
Sbjct: 66 TFLCPSLSNIAAYATVTDSA--------YRIIKRLIPGPYTFLLPATKLVPKLVMD---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLK--DNEWMVDPVVIADTYGPE 181
RK G+R+P++ +C +L+ + P+ISTS D+ + + D +
Sbjct: 114 ----PKRKTTGIRVPDNQVCLDLLEALGNPIISTSAHLPSDFDHNGFIGKAELFDQV-EK 168
Query: 182 GLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKGPKL 218
+D ++D G + ST++D+T P I+R G G +L
Sbjct: 169 LVDVIIDTGEDPGYQVSTILDLTDNEPAIVRAGLGAEL 206
>gi|333907245|ref|YP_004480831.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477251|gb|AEF53912.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas posidonica
IVIA-Po-181]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ E++++G V PTD Y++ C L SA++R+R I+ ++
Sbjct: 4 FFQIHPENPQTRLIKQAAEVIRQGGVIAYPTDCGYSLGCHLGDKSALDRIRAIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D + ++R +K PGPYTFI A+ EVP++ +
Sbjct: 64 NFTLVCRDLSEISTYA----RFDNR----LYRLLKSNTPGPYTFIFGATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+PN+ I A+L+++ P++S S+ + + M DP I D+
Sbjct: 113 -----HPKRKTIGIRVPNNRIVSALLEELGEPIMSVSLILPGETDPMTDPYDIRDSL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG +P+TVV M +IR G G
Sbjct: 167 ALDLVIDGGFCGFQPTTVVAMDADSVNVIRVGAG 200
>gi|422320377|ref|ZP_16401438.1| translation factor [Achromobacter xylosoxidans C54]
gi|317404846|gb|EFV85219.1| translation factor [Achromobacter xylosoxidans C54]
Length = 208
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++++ P+ L+ + L +G + VPTD+ YA+V L +A + LRR++ ++
Sbjct: 3 LHLDIHPANPQPRLLKQAAQWLNDGGLVAVPTDSSYAVVARLDDKNAADGLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEIGH----FARVDNRQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ +L++M APL+ST++ + E + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDHAVMLGLLEQMGAPLLSTTLIPKDETEALNDAEDIRERYAH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E L ++D G P+TV+D+TG P ++R G+G
Sbjct: 167 E-LAAIIDAGACPHSPTTVIDLTGAEPVVVRVGRG 200
>gi|255067572|ref|ZP_05319427.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sicca ATCC 29256]
gi|255048193|gb|EET43657.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sicca ATCC 29256]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 SVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 199
>gi|407683209|ref|YP_006798383.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407244820|gb|AFT74006.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'English Channel 673']
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + EL++EGAV V PTD+ YAI C ++ A+E+L RI+ ++
Sbjct: 4 FFYVHPDNPQKRLISQACELIREGAVVVYPTDSGYAIGCQMEDKKALEQLCRIRQIDKEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + ++ Y + FR +K+ PG YTF+L A++EVPK+
Sbjct: 64 NFTLMCRDMSELSIY--------AKVDNTAFRQIKNNTPGRYTFVLKATREVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ PL+STS+ + DP VI D +
Sbjct: 112 ----QNPKRKTIGIRVPDNAIALALLEELGEPLMSTSLILPGNTMAESDPDVIRDNLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ ++ GG +P+TVVD++ P I+R G G
Sbjct: 168 -VGLIIHGGYIGEQPTTVVDLSEDTPVIVRHGTG 200
>gi|238754969|ref|ZP_04616318.1| hypothetical protein yruck0001_15210 [Yersinia ruckeri ATCC 29473]
gi|238706828|gb|EEP99196.1| hypothetical protein yruck0001_15210 [Yersinia ruckeri ATCC 29473]
Length = 186
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 117/197 (59%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
+++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 1 MDVLRKGGVIVYPTDSGYALGCRLEEKAAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 58
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 59 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 104
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I D G + +D V+ GG +P+T
Sbjct: 105 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIRDHLGKQ-VDLVIHGGSLGQQPTT 163
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 164 VIDLTESSPEVIREGVG 180
>gi|119487019|ref|ZP_01620891.1| Sua5/YciO/YrdC/YwlC-like protein [Lyngbya sp. PCC 8106]
gi|119455948|gb|EAW37082.1| Sua5/YciO/YrdC/YwlC-like protein [Lyngbya sp. PCC 8106]
Length = 248
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 116/226 (51%), Gaps = 30/226 (13%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P + V+ L+ GAV + PTDT+YAI CDL SA+ER+R+IK + K
Sbjct: 32 YYEVHPQNPQERTITKVIADLRSGAVMLYPTDTVYAIGCDLTVKSAVERVRQIKQLSNDK 91
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL +I Y +R +K +PG YTF+L A+K VP+ +
Sbjct: 92 PLTFLCSSLSNISDY--------ANVSNQAYRIIKRLIPGSYTFLLPATKLVPRLVMS-- 141
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK G+R+P++ C A+++ + P+ISTS + E P+ + T G
Sbjct: 142 ------PKRKTTGIRVPDNHFCLALIETLGNPIISTSAHITNEEEGQA-PLAVPRT-GNM 193
Query: 182 G-----------LDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
G +D +VD G + ST++D+TG P ++R+GKG
Sbjct: 194 GKAELFDCLEKLVDIIVDDGSDPGYQVSTILDLTGDEPILVREGKG 239
>gi|261381413|ref|ZP_05985986.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria subflava NJ9703]
gi|284795602|gb|EFC50949.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria subflava NJ9703]
Length = 206
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQDRLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKNAMERILTIRKIDQKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++A A+LQ++ P++S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNATALALLQELGEPILSCTLMLPEDEEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 AVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 199
>gi|414076655|ref|YP_006995973.1| translation factor [Anabaena sp. 90]
gi|413970071|gb|AFW94160.1| putative translation factor [Anabaena sp. 90]
Length = 286
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 32/222 (14%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S ++E + L GA+ + PTDT+YAI CDL S SA+ER+R+IK + KPL+ L
Sbjct: 76 PDNPQSRRIEEIKLALLGGAIMLYPTDTVYAIGCDLNSKSAVERVRQIKQLANDKPLTFL 135
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY + +R +K +PGPYTF+L A+K VP+ +
Sbjct: 136 CPSLSNVATYASVSDTA--------YRIMKRLIPGPYTFLLPATKLVPR--------LVQ 179
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP------ 180
RK G+R+PN +C A+++ + P+ISTS ++E D ++ + P
Sbjct: 180 SPKRKTTGIRVPNHQVCLALMEALGNPIISTSAHIRANDE---DQEIVENGKQPILTRVD 236
Query: 181 --EGLDFVVDGGVRVAEP-----STVVDMTGTYPKIIRQGKG 215
+ LD +VD + AE ST++D+T P IIR+G G
Sbjct: 237 LYDHLDKLVDIIIDTAEEPTYQVSTILDLTDEEPVIIRRGLG 278
>gi|238798392|ref|ZP_04641874.1| hypothetical protein ymoll0001_19710 [Yersinia mollaretii ATCC
43969]
gi|238717777|gb|EEQ09611.1| hypothetical protein ymoll0001_19710 [Yersinia mollaretii ATCC
43969]
Length = 184
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 115/195 (58%), Gaps = 17/195 (8%)
Query: 21 LLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGF 80
+L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 1 MLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY---- 56
Query: 81 PRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P++
Sbjct: 57 ----AYVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVPSN 104
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I A+L + PL+ST++ ++ DP I D G + +D ++ GG +P+TV+
Sbjct: 105 PIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKDHLGKQ-VDLIIHGGSLGQQPTTVI 163
Query: 201 DMTGTYPKIIRQGKG 215
D+T + P++IR+G G
Sbjct: 164 DLTDSSPEVIREGAG 178
>gi|322418699|ref|YP_004197922.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M18]
gi|320125086|gb|ADW12646.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M18]
Length = 202
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 20/222 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + VVE+LK G V PTDT Y I C + S IER+ +IK +
Sbjct: 1 MLLEINPDNPQPRLVAKVVEILKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQIKQRDRK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C + +I Y + F+ ++ LPGPYTF+L A+ VP
Sbjct: 61 KPFSFICSDMSEISRY--------ARVSNYAFKQLRRLLPGPYTFVLEANSVVPD----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K ++ VG+R+P++ IC AI++++ AP+++TS L + + +P + G
Sbjct: 108 -LVTTK---QRTVGIRVPDNKICLAIVKELGAPIVTTSAN-LSGEDPIGNPWAVEHELGR 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ LD VVDGG A+ S+VV + G P+++R+G G + W E
Sbjct: 163 Q-LDLVVDGGDLSADVSSVVSLIGDRPEVLRKGVG-DVSWCE 202
>gi|315224006|ref|ZP_07865847.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea F0287]
gi|420159017|ref|ZP_14665827.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea str.
Holt 25]
gi|314945977|gb|EFS97985.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea F0287]
gi|394762884|gb|EJF45059.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga ochracea str.
Holt 25]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 119/201 (59%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L+++ Y
Sbjct: 20 VVEVLRRGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCPDLKNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFI+ + +PK + +K VG+R
Sbjct: 80 VK-------QIDTSTFKLLKRTLPGPYTFIMQGNNNLPK----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+P++ I + I++K+ P++STS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 123 VPDNLIARTIVEKLGNPIVSTSI-YDEDDVIEYTTDPELIFEKWQNK-VDLVIDGGYGDN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P ++R+GKG
Sbjct: 181 VASTVIDLSGDAPVVLREGKG 201
>gi|217970101|ref|YP_002355335.1| Sua5/YciO/YrdC/YwlC family protein [Thauera sp. MZ1T]
gi|217507428|gb|ACK54439.1| Sua5/YciO/YrdC/YwlC family protein [Thauera sp. MZ1T]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + + E+L+ G + +PTD+ YA+ C + + ++R+RRI+ V+
Sbjct: 4 YFSLHPEQPQARLIRQAAEILRGGGLVALPTDSAYALACQVGDAALLDRIRRIRGVDERH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY R D + +R +K PGPYTFIL +KE+P++ +
Sbjct: 64 HFTLMCRDLSEIGTYA----RVDN----SQYRLLKAVTPGPYTFILEGTKELPRRVL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P A+ A+L ++D PL+++++ ++ + DP I D G +
Sbjct: 113 -----HPKRKTIGLRVPEHAVVSALLAEIDGPLLTSTLILPGEDLPLSDPEEIRDRLG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
++ V++ G E +TV+D+T P+++R G+GP
Sbjct: 167 LVELVIEAGYCGPEATTVIDLTSGAPELVRAGRGP 201
>gi|406596264|ref|YP_006747394.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii ATCC
27126]
gi|407687145|ref|YP_006802318.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407699564|ref|YP_006824351.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|406373585|gb|AFS36840.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii ATCC
27126]
gi|407248711|gb|AFT77896.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407290525|gb|AFT94837.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + EL++EGAV V PTD+ YAI C ++ A+E+L RI+ ++
Sbjct: 4 FFYVHPDNPQKRLISQACELIREGAVVVYPTDSGYAIGCQMEDKKALEQLCRIRQIDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + ++ Y + FR +K+ PG YTF+L A++EVPK+
Sbjct: 64 NFTLMCRDMSELSIY--------AKVDNTAFRQIKNNTPGRYTFVLKATREVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ PL+STS+ + DP VI D +
Sbjct: 112 ----QNPKRKTIGIRVPDNAIALALLEELGEPLMSTSLILPGNTMAESDPDVIRDNLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ ++ GG +P+TVVD++ P I+R G G
Sbjct: 168 -VGLIIHGGYIGEQPTTVVDLSEDTPVIVRHGTG 200
>gi|418745805|ref|ZP_13302141.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
CBC379]
gi|418752562|ref|ZP_13308821.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
MOR084]
gi|409967120|gb|EKO34958.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
MOR084]
gi|410793436|gb|EKR91355.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
CBC379]
Length = 202
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLSEGRVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKVAIIREGKG 198
>gi|330830520|ref|YP_004393472.1| translation factor YciO [Aeromonas veronii B565]
gi|423208806|ref|ZP_17195360.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AER397]
gi|328805656|gb|AEB50855.1| translation factor YciO [Aeromonas veronii B565]
gi|404618651|gb|EKB15571.1| Sua5/YciO/YrdC/YwlC family protein [Aeromonas veronii AER397]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++++ G V V PTD+ YA+ C + A+ER+ RI+ ++ + +++
Sbjct: 9 PENPQARLIGQAVQIIQNGGVIVYPTDSGYALGCQMGDKGALERICRIRRLDANHDFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + + FR +K+ PG YTFI A+KEVP++ +
Sbjct: 69 CRDLSEISTY--------AKVDNSAFRLIKNNTPGAYTFIFKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDF 185
+K +G+R+P++ I QA+L+ + PL+ST++ L D+E DP I D G + +D
Sbjct: 114 -EKKKSIGIRVPDNKIAQALLEALGEPLLSTTL-ILPDSEIAEFDPEEIFDKLGKQ-IDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
VV+GG +P+TVVD + P + R+G G
Sbjct: 171 VVNGGYLGEQPTTVVDFSDDEPVLRRRGAG 200
>gi|241758536|ref|ZP_04756654.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria flavescens SK114]
gi|241321309|gb|EER57463.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria flavescens SK114]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQDRLIKQAADIVRGGGVIVYPTDSCYALGCKLGDKNAMERILTIRKIDQKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++A A+LQ++ P++S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNATALALLQELGEPILSCTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 AVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGKG 199
>gi|349610264|ref|ZP_08889620.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. GT4A_CT1]
gi|348610264|gb|EGY59960.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. GT4A_CT1]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAADIVRSGGVIVYPTDSCYALGCKLGDKAAMERILAIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I ++LQ++ PL+S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNNIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQGKG
Sbjct: 167 SVDLVIDGGWCGTEPTTVIDMTNGT--ELIRQGKG 199
>gi|456875588|gb|EMF90789.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
ST188]
Length = 202
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLSEGRVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGT 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKMAIIREGKG 198
>gi|284036531|ref|YP_003386461.1| Sua5/YciO/YrdC/YwlC family protein [Spirosoma linguale DSM 74]
gi|283815824|gb|ADB37662.1| Sua5/YciO/YrdC/YwlC family protein [Spirosoma linguale DSM 74]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P D ++E +V+ L++GAV + PTDT+Y + CD+ + A+ER+ RIK ++P+K
Sbjct: 5 FIKLYPRNPDPRRIEHIVKALRDGAVIIYPTDTIYGMGCDIHNTRAVERVARIKGIKPAK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L I Y R Q F+ +K LPGP+TFIL A+ VPK
Sbjct: 65 NDFSFICYDLSHIADYA----RVGNQA----FKLMKKVLPGPFTFILEATGSVPKIL--- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYG 179
S +K VG+R+P++ I + I+ ++ P+I+TS++ + E+ DP +I + +
Sbjct: 114 ------NSNKKTVGIRVPDNDIPRQIVHELGNPIITTSIRDEDEIIEYSTDPELIFEKFQ 167
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG ST+VD T IIRQG G
Sbjct: 168 NQ-VDMVIDGGYGGNVASTIVDATDDNFSIIRQGLG 202
>gi|126666027|ref|ZP_01737007.1| putative translation factor (SUA5) [Marinobacter sp. ELB17]
gi|126629349|gb|EAZ99966.1| putative translation factor (SUA5) [Marinobacter sp. ELB17]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + V++L++G V PTD+ YA+ C L SA +R++RI+ ++
Sbjct: 4 FFQIHPDNPQKRLINQAVDILRKGGVIAYPTDSGYALGCHLGDKSASDRIKRIRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L DI TY + +R +K PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSDIGTY--------AKVDNTTYRMLKTYTPGAYTFILDATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P++A+ A+L + P++S+++ + E M DP I D E
Sbjct: 113 -----HPKRRTIGVRVPDNAVVHALLGEFGEPIMSSTLILPGETEPMTDPEDIRDALEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG E +TVV+ T P + R GKG
Sbjct: 168 -LDLIIDGGFCGMEATTVVNFTSGSPVVTRVGKG 200
>gi|75908905|ref|YP_323201.1| translation factor SUA5 [Anabaena variabilis ATCC 29413]
gi|75702630|gb|ABA22306.1| translation factor SUA5 [Anabaena variabilis ATCC 29413]
Length = 219
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 115/226 (50%), Gaps = 32/226 (14%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P S ++E + L GAV + PTDT+YAI CDL SA+ER+R+IK + KP
Sbjct: 5 IAVHPDNPQSRRIEEIRSALSSGAVMLYPTDTVYAIGCDLNVKSAVERVRQIKQLANDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ LC SL ++ TY F +R +K +PG YTF+L A+K VPK
Sbjct: 65 LTFLCPSLSNVATY--AFVSDTA------YRIMKRLIPGTYTFLLPATKLVPK------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+ RK G+R+PN +C A+L+ + P+ISTS D +++++
Sbjct: 110 -LVQSPKRKTTGIRVPNHTVCLALLEALGNPIISTSAHIPPDEAGNGKVGIVSESITSMA 168
Query: 183 ---------LDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+D +VD G EP ST+VD+TG P I RQG G
Sbjct: 169 ELFDRVDKLVDVIVDTG---QEPTYDVSTIVDLTGDEPMITRQGLG 211
>gi|227111427|ref|ZP_03825083.1| hypothetical protein PcarbP_00610 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++ PL+ST++ ++ DP I D G + +D ++ GG +P+T
Sbjct: 125 SNPIALELLAALNEPLMSTTLMLPGNDFAESDPEEIQDRLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++ R+G G
Sbjct: 184 VIDLTESAPRVAREGTG 200
>gi|329119555|ref|ZP_08248239.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464342|gb|EGF10643.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 18/219 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V ++++ G V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIRQVAQIVRGGGVAAYPTDSCYALGCRLGDKEAMERILRIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLAELGTY--------AKVDNAQFRMLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++A+ A+L+++ PL+S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNAVALALLRELGEPLLSCTLMLPEDSEPLSDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW 220
+D V+DGG EP+TVVDMT ++R+G+G K +
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGV-TLVREGRGDKAVF 204
>gi|78485574|ref|YP_391499.1| Sua5/YciO/YrdC/YwlC [Thiomicrospira crunogena XCL-2]
gi|78363860|gb|ABB41825.1| Sua5/YciO/YrdC/YwlC family protein [Thiomicrospira crunogena XCL-2]
Length = 207
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+ P L VVE+L +G V PT++ YA+ C L + +R+R I+ ++
Sbjct: 6 LYISVHPENPQERLLLQVVEVLNKGGVIAYPTESGYALGCLLDNKEGADRIRAIRRLDEK 65
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+++C L + Y G+ Q FR +K LPGPYTFIL AS+EVP++
Sbjct: 66 HHFTLVCPDLSHLSAYAK---VGNVQ-----FRYLKSHLPGPYTFILPASREVPRRL--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K RK +G+R+ + + A+L D PLIS S+ ++ M D I +T G
Sbjct: 115 --QTPK---RKTIGLRVTPNVVTNALLSYFDKPLISVSLILPGEDLPMTDGWSIQETLG- 168
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG EP+TV+D T P++IRQG+G
Sbjct: 169 HALDAVLDGGFCGFEPTTVIDFTDDVPELIRQGQG 203
>gi|291568165|dbj|BAI90437.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 222
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 25/221 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P +E + + LK GAV + PTDT+YAI CDL SA++++R+IK + KPL
Sbjct: 6 EIHPQNPQKRTIEQINDALKRGAVMLYPTDTVYAIGCDLTVKSAVQKVRQIKQISNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PG YTF+L A+K+VPK +
Sbjct: 66 TFLCSSLSNIADYAIVTDEA--------YRTIKKLIPGSYTFVLPATKQVPKLVMS---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
RK G+R+P+ +C AIL+ + P+ISTS +++E I Y L
Sbjct: 114 ----PKRKTTGIRVPDHPVCLAILESLGNPVISTSAHIKEEDEPSALIRKIPQNYDKFQL 169
Query: 184 --------DFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKG 215
D +VD G + + ST++D++ P ++R+GKG
Sbjct: 170 FDALENLVDIIVDDGADLDYQVSTIIDLSADDPVLVRRGKG 210
>gi|392967926|ref|ZP_10333342.1| Sua5/YciO/YrdC/YwlC family protein [Fibrisoma limi BUZ 3]
gi|387842288|emb|CCH55396.1| Sua5/YciO/YrdC/YwlC family protein [Fibrisoma limi BUZ 3]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 120/216 (55%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++ P D +++ VV L++GAV + PTDT+Y + CD+ + A+ER+ RIK ++P+K
Sbjct: 5 FIRLYPQNPDPRRIQYVVNALRDGAVVIYPTDTIYGMGCDIHNARAVERVARIKGIKPAK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L I Y R Q F+ +K LPGP+TFIL AS VPK
Sbjct: 65 NDFSFICYDLSHIADYA----RVSNQA----FKLMKKLLPGPFTFILEASSRVPKLL--- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
+ +K VG+R+P+ I + ++ ++ P+I+TS++ + E+ DP +I + +
Sbjct: 114 ------NTNKKTVGIRVPDHDIPRQLVHELGNPIITTSIRDEDEVIEYSTDPELIFEKFQ 167
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG PST++D T IIRQG G
Sbjct: 168 HQ-VDIVIDGGYGGNVPSTIIDATDDDFSIIRQGLG 202
>gi|403058506|ref|YP_006646723.1| hypothetical protein PCC21_020670 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805832|gb|AFR03470.1| hypothetical protein PCC21_020670 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++ PL+ST++ ++ DP I D G + +D ++ GG +P+T
Sbjct: 125 SNPIALELLAALNEPLMSTTLMLPGNDFAESDPEEIQDRLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++ R+G G
Sbjct: 184 VIDLTESVPRVAREGTG 200
>gi|392397973|ref|YP_006434574.1| Sua5/YciO/YrdC/YwlC family protein [Flexibacter litoralis DSM 6794]
gi|390529051|gb|AFM04781.1| Sua5/YciO/YrdC/YwlC family protein [Flexibacter litoralis DSM 6794]
Length = 222
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 127/231 (54%), Gaps = 22/231 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSI 65
P K++ VVE+L+ G V + PTDT+Y I CD + A+E++ +IK ++P K LS
Sbjct: 9 PDNPQESKIQKVVEVLRNGGVIIYPTDTVYGIGCDFTNAKAVEKVCKIKGIDPKKMHLSF 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L DI Y ++F+ +K LPG +TFIL +S +VPK G
Sbjct: 69 ICYDLSDISLYAHRVSN-------HVFKVMKKALPGAFTFILDSSNKVPK----VGGVK- 116
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
+K VG+R+P+ I + I+Q++ P+++TSV + KD + M DP ++ + Y + +D
Sbjct: 117 ----KKQVGIRVPDHKIPRMIVQELGNPIVTTSV-YGKDGKTMTDPSLMKEEYEHQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW---MEEEDANSTAIED 233
++D G+ + STV+ ++RQG G + + +E+A S +E+
Sbjct: 171 IIDAGMGDIQASTVIRCIEDNIILLRQGLGDIEKFADVLSKEEAESLLVEE 221
>gi|456862042|gb|EMF80628.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira weilii serovar
Topaz str. LT2116]
Length = 202
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG+V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISNRLLEGSVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------ETFRLMKRITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +LQ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLQVHPNPLTSTSV--FANDEFIIEVDLLERVYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG+ E ST++++TG I+R+GKG
Sbjct: 165 R-IEGIIDGGIVKVELSTILNVTGDKMTIVREGKG 198
>gi|357059870|ref|ZP_09120646.1| Sua5/YciO/YrdC/YwlC family protein [Alloprevotella rava F0323]
gi|355377137|gb|EHG24366.1| Sua5/YciO/YrdC/YwlC family protein [Alloprevotella rava F0323]
Length = 202
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 19/210 (9%)
Query: 8 SGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVE-PSKPLSIL 66
S D +L+ ++++L +G V + PTDT YA+ C+ A+ER+ RI+N++ S PLSI+
Sbjct: 7 SHNDISRLQQIIDVLNDGGVIIYPTDTTYALGCNALKERAVERICRIRNIDLRSHPLSII 66
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C + +I Y +F+ +K LPGP+TFIL+ + +PK +
Sbjct: 67 CYDMGNISEY--------AHISTPVFKLMKRNLPGPFTFILSGTNRLPK--------IFR 110
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLK-DNEWMVDPVVIADTYGPEGLDF 185
+K VG+R+P++ I +++ + PL++ S+ D E+ +P +I + +G + +D
Sbjct: 111 VRRQKEVGIRMPDNPITNQLVEMLGVPLLTASLPVEDMDREYATNPELIEEHFGSD-VDL 169
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+DGG + ST+VD PKI+RQG G
Sbjct: 170 VIDGGEGIDGESTIVDCLDEDPKILRQGLG 199
>gi|33600639|ref|NP_888199.1| hypothetical protein BB1654 [Bordetella bronchiseptica RB50]
gi|410419404|ref|YP_006899853.1| hypothetical protein BN115_1613 [Bordetella bronchiseptica MO149]
gi|412339114|ref|YP_006967869.1| hypothetical protein BN112_1804 [Bordetella bronchiseptica 253]
gi|427813868|ref|ZP_18980932.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427820352|ref|ZP_18987415.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427824674|ref|ZP_18991736.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33568239|emb|CAE32151.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408446699|emb|CCJ58369.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408768948|emb|CCJ53721.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410564868|emb|CCN22416.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410571352|emb|CCN19578.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410589939|emb|CCN05015.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 208
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P+ ++ + L +G + VPTD+ YA+V L +A + LRR++ ++ L++L
Sbjct: 9 PANPQPRLIKQAAQWLSDGGLVAVPTDSSYAVVAPLDDKAAADALRRLRGLDERHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I F R D + +R +K PGP+TFIL A++EVP++
Sbjct: 69 CRDLAEIGQ----FARVDNKQ----YRLLKAATPGPWTFILEATREVPRRV--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P A+ A+L+++ APL+ST++ + + + DP I + Y E L V
Sbjct: 113 HPSRKTIGIRVPAHAVALALLEQVGAPLLSTTLIPRDEEDALNDPEAIQERYQHE-LAAV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D G P+TVVD+TG P ++R+G G
Sbjct: 172 IDAGACPQTPTTVVDLTGAEPAVLRRGGG 200
>gi|333893775|ref|YP_004467650.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas sp. SN2]
gi|332993793|gb|AEF03848.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas sp. SN2]
Length = 206
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P L EL++EGAV V PTD+ YAI C ++ A+E+L RI+++ +++
Sbjct: 9 PENPQQRLLNQACELIREGAVVVYPTDSGYAIGCQMEDKKALEQLCRIRDIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y + FR +K+ PG YTF+L A++EVPK+ +
Sbjct: 69 CRDMSELSIY--------AKVDNTAFRQIKNNTPGSYTFVLKATREVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++AI A+L+ + PL+STS+ + DP VI D + + +
Sbjct: 113 NPKRKTIGIRVPDNAIALALLETLGEPLMSTSLILPGNTMAESDPDVIRDNLEKQ-VGVI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D++ P I+R+G G
Sbjct: 172 IHGGYLGEQPTTVIDLSEDTPVIMRRGTG 200
>gi|319955258|ref|YP_004166525.1| translation factor sua5 [Cellulophaga algicola DSM 14237]
gi|319423918|gb|ADV51027.1| translation factor SUA5 [Cellulophaga algicola DSM 14237]
Length = 206
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 125/217 (57%), Gaps = 20/217 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + +++ V+ +LK+G + + PTDT+Y + CD+ + A+E++ RIK ++ K
Sbjct: 4 FIKIYPENPNPKEIKKVINVLKKGGLIIYPTDTVYGLGCDITNTKALEKIARIKGIKLDK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANWSFICADLSNLSDYVR-------QIDTPTFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
++ +K VG+R+P+++I +AI++ + P++STS++ + E+ DP +I + +
Sbjct: 112 -----EFKKKKTVGIRVPDNSIAKAIVEALGNPIVSTSIRDEDEVLEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG + STV+D++ P +IR+GKGP
Sbjct: 166 QNLVDIVIDGGYGDNKASTVIDLSEGEPIVIREGKGP 202
>gi|338997287|ref|ZP_08635988.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. TD01]
gi|338765884|gb|EGP20815.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. TD01]
Length = 207
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ +E++++G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 YFQIHPENPQKRLIDQAIEVIRKGGVVAYPTDSGYALGCHLGEKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + +FR +K PGPYTFIL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNAVFRLLKAYTPGPYTFILDATTEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L + PL+S ++ + D M DP I D +G
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLGALGEPLMSVTLIPVGDTLPMSDPEEIRDRFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG +P++V+D+ PKI+R+G+G
Sbjct: 168 -LDAIIDGGACHLDPTSVIDLRELPPKIVREGRG 200
>gi|422004858|ref|ZP_16352069.1| Sua5 family translation factor [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256454|gb|EKT85874.1| Sua5 family translation factor [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 202
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLLEGRVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG I+R+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKAAIVREGKG 198
>gi|421112631|ref|ZP_15573088.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
JET]
gi|410802276|gb|EKS08437.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
JET]
Length = 202
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLLEGRVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKMAIIREGKG 198
>gi|17227697|ref|NP_484245.1| hypothetical protein alr0201 [Nostoc sp. PCC 7120]
gi|17135179|dbj|BAB77725.1| alr0201 [Nostoc sp. PCC 7120]
Length = 219
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 117/227 (51%), Gaps = 34/227 (14%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P S ++E + L GAV + PTDT+YAI CDL SA+ER+R+IK + KP
Sbjct: 5 IAVHPDNPQSRRIEEIRSALSSGAVMLYPTDTVYAIGCDLNVKSAVERVRQIKQLANDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ LC SL ++ TY F +R +K +PG YTF+L A+K VP+
Sbjct: 65 LTFLCPSLSNVATY--AFVSDTA------YRIMKRLIPGTYTFLLPATKLVPR------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD----------NEWMVDPV 172
+ RK G+R+PN +C A+L+ + P+ISTS D +E + V
Sbjct: 110 -LVQSPKRKTTGIRVPNHTVCLALLEALGNPIISTSAHIPPDEAGNGKVGIISESITSMV 168
Query: 173 VIADTYGPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+ D + +D +VD G EP ST+VD+TG P I RQG G
Sbjct: 169 ELFDRVD-KLVDVIVDTG---QEPTYDVSTIVDLTGDEPMITRQGLG 211
>gi|409990253|ref|ZP_11273656.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira platensis str.
Paraca]
gi|409938885|gb|EKN80146.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira platensis str.
Paraca]
Length = 275
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 25/221 (11%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P +E + + LK GAV + PTDT+YAI CDL SA++++R+IK + KPL
Sbjct: 59 EIHPQNPQKRTIEQINDALKRGAVMLYPTDTVYAIGCDLTVKSAVQKVRQIKQISNDKPL 118
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PG YTF+L A+K+VPK +
Sbjct: 119 TFLCSSLSNIADYAIVTDEA--------YRTIKKLIPGSYTFVLPATKQVPKLVMS---- 166
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
RK G+R+P+ +C AIL+ + P+ISTS +++E I Y L
Sbjct: 167 ----PKRKTTGIRVPDHPVCLAILESLGNPVISTSAHIKEEDEPSALIRKIPQNYDKFQL 222
Query: 184 --------DFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKG 215
D +VD G + + ST++D++ P ++R+GKG
Sbjct: 223 FDALENLVDIIVDDGADLDYQVSTIIDLSADDPVLVRRGKG 263
>gi|300868277|ref|ZP_07112906.1| translation factor SUA5 [Oscillatoria sp. PCC 6506]
gi|300333712|emb|CBN58090.1| translation factor SUA5 [Oscillatoria sp. PCC 6506]
Length = 222
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 29/215 (13%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
L+ GA+ + PTDT+YAI CDL SA+ER+R+IK++ KPL+ LC SL +I Y
Sbjct: 24 LQAGAIMLYPTDTVYAIGCDLNVKSAVERVRQIKHLSNDKPLTFLCPSLSNIAQYAVVSD 83
Query: 82 RGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDA 141
G +R +K +PGPYTF+L A+K VP+ + RK G+R+P+
Sbjct: 84 SG--------YRMIKRLIPGPYTFLLPATKLVPRLVME--------PKRKTTGIRVPDQK 127
Query: 142 ICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIA--DTYGPEGL--------DFVVDGGV 191
C A+L+ + P+ISTS D+E +A + +G L D +VD
Sbjct: 128 FCLALLEALGNPIISTSAHITNDDEGKAPAAALATEENFGKAELFDSLEKLVDIIVDDTS 187
Query: 192 RVA-EPSTVVDMTGTYPKIIRQGKGPKLY--WMEE 223
+ ST++D+T P I+R+G G + W EE
Sbjct: 188 ETGYQVSTILDLTQDKPSIVRRGLGWEAVANWAEE 222
>gi|29654232|ref|NP_819924.1| sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii RSA 493]
gi|154706053|ref|YP_001424357.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii Dugway
5J108-111]
gi|161829815|ref|YP_001596797.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii RSA 331]
gi|29541498|gb|AAO90438.1| sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii RSA 493]
gi|154355339|gb|ABS76801.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii Dugway
5J108-111]
gi|161761682|gb|ABX77324.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii RSA 331]
Length = 204
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P + ++ VE +K G + TD+ YA+ C L + S ER+RR++ + + P
Sbjct: 4 IHIHPDNPQARLIKQAVETVKTGGILAYSTDSGYALGCGLGNKSGAERIRRLRQLNKAHP 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHAN-IFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y AN +FR +K PGPYTFIL+A++ VP++
Sbjct: 64 FTLLCRDLSEIAVYAR---------IANPVFRFLKAHTPGPYTFILSATRAVPRQL---- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P+ + QAIL+++ PL++ ++ + +W + +
Sbjct: 111 ----QHPKRKTIGIRVPDHRVIQAILEQLQEPLMNVTLIF-PGEQWAPSEISEREDELAA 165
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VD GV EP+TV+D+ P I+R+GKG
Sbjct: 166 QVDLIVDSGVCGVEPTTVIDLVDGEPTILREGKG 199
>gi|237745676|ref|ZP_04576156.1| translation factor [Oxalobacter formigenes HOxBLS]
gi|229377027|gb|EEO27118.1| translation factor [Oxalobacter formigenes HOxBLS]
Length = 208
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 126/215 (58%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y+E P S ++ ++++ G V V+PTD+ YA+VC L +A++R+R+I+ ++
Sbjct: 4 FYLEIHPVNPQSRLIKKAADVVRGGGVVVMPTDSSYALVCRLDDKAAVDRIRQIRQMDER 63
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L+++ +Y R D +R +K PG +TFIL A+KEVP++
Sbjct: 64 HLLTLLCRDLKEVGSYA----RVDNSA----YRLLKAATPGAFTFILQATKEVPRRL--- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++ I QA+L+++ PLI T++ D + + + I +
Sbjct: 113 -----SHPSRKTIGLRIPDNRIDQALLEELGEPLIGTTLILPGDEDPLTEGYAIQERL-E 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG P+TV+D+TG P+++R G+G
Sbjct: 167 KLVDAVIDGGACGLLPTTVIDLTGKEPELVRSGRG 201
>gi|402492926|ref|ZP_10839683.1| hypothetical protein AagaZ_01609 [Aquimarina agarilytica ZC1]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 118/204 (57%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++ V++LK G + + PTDT+Y + CD+ S A+ R+ +IK ++ K S +C+ L +
Sbjct: 16 QIAEAVKVLKNGGLIIYPTDTVYGLGCDITSVKALNRIAKIKGIKLEKANWSFICKDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q ++ F+ +K CLPGP+TFIL + ++P + + +K
Sbjct: 76 LSDYVR-------QIDSSTFKLLKRCLPGPFTFILPGNNQLP----------SVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P++ IC +++ + P++STS+ + E+ DP +I + +G +D V+DGG
Sbjct: 119 VGIRVPDNKICHDLVEALGNPIVSTSIHDEDEILEYTTDPELILEKWG-NLVDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
PS++VD+T P I+R+GKG
Sbjct: 178 GDNIPSSIVDVTDNIPVIVREGKG 201
>gi|374375893|ref|ZP_09633551.1| translation factor SUA5 [Niabella soli DSM 19437]
gi|373232733|gb|EHP52528.1| translation factor SUA5 [Niabella soli DSM 19437]
Length = 202
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 117/216 (54%), Gaps = 19/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ V + L+ G + V PTDT+Y + CD+ AIER+ IK ++P
Sbjct: 1 MLISIHPKDPQPRLIKQVADSLRNGGIIVYPTDTIYGLGCDIFQTKAIERIAWIKQIDPK 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C +L + + Q + FR +K LPGPYTFIL ASK+VPK
Sbjct: 61 KAQFSFVCANLSHLSDFAK-------QLSNSTFRTMKEYLPGPYTFILEASKQVPKIL-- 111
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
+S + VG+R+P++ I A+++++ P++ST++ ++ DP +I D Y
Sbjct: 112 -------HSKKATVGIRVPDNKITMALIEELGHPILSTTLPGELVEDY-TDPEIIHDKY- 162
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VV+GG+ PSTV+D TG ++RQG G
Sbjct: 163 QNVVDIVVEGGIGGMVPSTVIDATGEELVLVRQGLG 198
>gi|365836506|ref|ZP_09377898.1| Sua5/YciO/YrdC/YwlC family protein [Hafnia alvei ATCC 51873]
gi|364563950|gb|EHM41735.1| Sua5/YciO/YrdC/YwlC family protein [Hafnia alvei ATCC 51873]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE+L++G V V PTD+ YA+ C L +A+ER+ RI+N++ + +++CR L +I TY
Sbjct: 21 VEVLRKGGVIVYPTDSGYALGCMLGEKNAMERICRIRNLDSNHNFTLVCRDLSEISTYAF 80
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 81 --------VDNTAFRLIKNNTPGHYTFILKATKEVPRRLMS--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L + PL+ST++ ++ DP I D G + +D V+ GG +P+T
Sbjct: 125 SNPIALELLAALGEPLMSTTLMLPGNDFAESDPEEIQDALG-KVVDLVIHGGFLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG-PKLYW 220
V+D+T P+++R G G PK +
Sbjct: 184 VIDLTEDSPEVVRVGAGDPKPFM 206
>gi|153206741|ref|ZP_01945582.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|165918501|ref|ZP_02218587.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii Q321]
gi|212218383|ref|YP_002305170.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii CbuK_Q154]
gi|120577104|gb|EAX33728.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|165917747|gb|EDR36351.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii Q321]
gi|212012645|gb|ACJ20025.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii CbuK_Q154]
Length = 204
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P + ++ VE +K G + TD+ YA+ C L + S ER+RR++ + + P
Sbjct: 4 IHIHPDNPQARLIKQAVETVKTGGILAYSTDSGYALGCRLGNKSGAERIRRLRQLNKAHP 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHAN-IFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y AN +FR +K PGPYTFIL+A++ VP++
Sbjct: 64 FTLLCRDLSEIAVYAR---------IANPVFRFLKAHTPGPYTFILSATRAVPRQL---- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P+ + QAIL+++ PL++ ++ + +W + +
Sbjct: 111 ----QHPKRKTIGIRVPDHRVIQAILEQLQEPLMNVTLIF-PGEQWAPSEISEREDELAA 165
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VD GV EP+TV+D+ P I+R+GKG
Sbjct: 166 QVDLIVDSGVCGVEPTTVIDLVDGEPTILREGKG 199
>gi|398811841|ref|ZP_10570627.1| Sua5/YciO/YrdC/YwlC family protein [Variovorax sp. CF313]
gi|398079526|gb|EJL70374.1| Sua5/YciO/YrdC/YwlC family protein [Variovorax sp. CF313]
Length = 211
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL G + VPTD+ YA+ C L A+++LRRI+ V+
Sbjct: 4 YFEVHPENPQQRLLKQAATLLARGEIVAVPTDSSYALACHLDDKDAVDQLRRIRQVDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTF+L A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNKQ----YRLLKAATPGPYTFLLEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ + +L APL++T++ + + + D I + + +
Sbjct: 112 ----SHPQRKTIGLRVPDHKVLLELLSLHGAPLLATTLIAPGETDALNDAQTIRERFEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+ V+D G ++P+TVVD+ TG P ++RQG+G
Sbjct: 168 -IAAVIDAGACSSQPTTVVDLTPMGTGDDPVVVRQGRG 204
>gi|320352189|ref|YP_004193528.1| translation factor SUA5 [Desulfobulbus propionicus DSM 2032]
gi|320120691|gb|ADW16237.1| translation factor SUA5 [Desulfobulbus propionicus DSM 2032]
Length = 205
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 116/213 (54%), Gaps = 18/213 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
VE +P + V++L+ G V PTDT+Y + CD+ + A++R+ +IK KP
Sbjct: 5 VEINPINPQPRLIAQAVDILQHGGVICYPTDTMYGVGCDIFNQKAVKRVYQIKRRPKDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C SL +I Y G +R ++ LPGPYTF+L+ +K VPK +
Sbjct: 65 FSFMCASLTNISQY--------GHVGNTAYRLMRKNLPGPYTFVLSGTKMVPKIML---- 112
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
+ +K VG+R+PN +C A+L+ + P+++TS D++ + + + +G +
Sbjct: 113 -----TKQKTVGIRVPNHPVCLAMLELLGNPVLNTSAMIEDDDQPVRTAMDVERLFGKQ- 166
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++D G V PS+V+ + P+++R+G+G
Sbjct: 167 VDLIIDSGEIVPAPSSVISLLSEQPEVLREGRG 199
>gi|405374103|ref|ZP_11028673.1| Sua5/YciO/YrdC/YwlC family protein [Chondromyces apiculatus DSM
436]
gi|397087115|gb|EJJ18177.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 203
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E D L+ VE+L+ G + PTDT + + CDL S IERL ++K + KP
Sbjct: 6 LEVDMEHPSPRHLQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS LC L D+ Y H + F R +K PG +TFIL A++ VP +
Sbjct: 66 LSFLCPDLSDVARYA----------HVSNFAYRTMKGLTPGAFTFILEATRLVPDLMM-- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P+ + + + + + PL++TS + E + D I G
Sbjct: 114 -------SKQKQVGIRVPDSPLVRELARALGRPLVTTSATN-TEGEPLTDAKDIKAELG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GLD ++DGGV + EPSTV+ + G +I+RQGKG
Sbjct: 165 HGLDLILDGGVTLNEPSTVISLIGDSLEILRQGKG 199
>gi|254448704|ref|ZP_05062162.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium HTCC5015]
gi|198261712|gb|EDY85999.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium HTCC5015]
Length = 206
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P ++ V E+++ G + V PTD+ YAI C L A+ER++RI+ V+
Sbjct: 4 FFEIHPDNPQGRLVQQVAEIIRGGGIVVYPTDSSYAIGCHLDDKRALERIQRIRQVDKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + FR +K PGPYTFI +A+ +VP++
Sbjct: 64 NFTLMCRDLSELGNY--------AKVGNQAFRLLKSHTPGPYTFIFSATSQVPRRLA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEW--MVDPVVIADTYG 179
+ +K +G+R+P+ I AIL+ + P++ST++ L + EW +VD + D
Sbjct: 113 -----HPKKKTIGLRVPDCNITLAILEALGEPMLSTTL-ILPNVEWPELVDVNFLRDQL- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG AEP+TVVD+T P++ R G+G
Sbjct: 166 ENAVDAIIEGGQIPAEPTTVVDLTRDVPEVTRYGRG 201
>gi|126664113|ref|ZP_01735106.1| translation factor [Flavobacteria bacterium BAL38]
gi|126623827|gb|EAZ94522.1| translation factor [Flavobacteria bacterium BAL38]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 23/214 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E PS A ++ VV +LK+G + + PTDT+Y + CD+ + A+E+L +IK ++ K
Sbjct: 9 EDKPSEA---AIKKVVSVLKDGGLVIYPTDTVYGLGCDITNSRALEKLAKIKGIKLEKAN 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C SL ++ Y Q + F+ +K LPGPYTFIL + ++P+
Sbjct: 66 FSFVCSSLSNLSDYVK-------QIDTSTFKILKRALPGPYTFILPGNNDLPR------- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPE 181
++ +K VG+R+P + I I++ + P++STS++ + E+ DP +I + + +
Sbjct: 112 ---EFRKKKTVGIRVPANNIALQIVEMLGNPIVSTSIRDEDEVIEYSTDPELIFEKWQNK 168
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST++D+TG P++IR+GKG
Sbjct: 169 -VDLVIDGGYGDNVASTIIDLTGHEPEVIREGKG 201
>gi|121997386|ref|YP_001002173.1| Sua5/YciO/YrdC/YwlC family protein [Halorhodospira halophila SL1]
gi|121588791|gb|ABM61371.1| translation factor SUA5 [Halorhodospira halophila SL1]
Length = 208
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P + V++L +G V PTD+ YA+ C L +A++R+R I+ ++ S
Sbjct: 4 YFEVHPETPQQRLINQAVQILADGGVIAYPTDSSYALGCRLGDKAALDRIREIRRLDNSH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ C+ L+DI TY + +R +K PGPYTFIL A+ EVP++
Sbjct: 64 NFTMACKDLKDIGTYA--------KMENYAYRLLKSHTPGPYTFILRATSEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P+ +A+L + PL+S +++ D+ + DP I + G +
Sbjct: 112 ----QHPKRKTIGIRVPDHPASRALLNTLGEPLMSVTLQMPGDDMPLNDPEAIQERIG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VV GG STV+D+TG ++IR+G G
Sbjct: 167 LIDAVVAGGPTGGGVSTVIDLTGEAAEVIREGVG 200
>gi|332879949|ref|ZP_08447634.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332682160|gb|EGJ55072.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 208
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 120/205 (58%), Gaps = 22/205 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++ +VE+L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L++
Sbjct: 16 EIAKIVEVLRNGGLIIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFVCSDLKN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q ++ F+ +K LPG YTFI+ + +PK + +K
Sbjct: 76 LSDYVK-------QIDSSTFKLLKRALPGAYTFIMQGNNNLPK----------DFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGG 190
VG+R+P++ I + I++++ P++STS+ + +D+ E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNLIARTIVERLGNPIVSTSI-YDEDDVIEYTTDPELIFEKW-QNLVDIVIDGG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P +IR+GKG
Sbjct: 177 YGDNTASTVIDLSGDEPVVIREGKG 201
>gi|415949254|ref|ZP_11556853.1| Translation factor [Herbaspirillum frisingense GSF30]
gi|407757766|gb|EKF67690.1| Translation factor [Herbaspirillum frisingense GSF30]
Length = 211
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 24/218 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P ++ +++ +G + +PTD+ YA+VC L + A+ER+RRI+ V+
Sbjct: 4 FFEIHPENPQLRLIKQAAQIIHKGGLVALPTDSCYALVCQLDNKDAVERVRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y R +R +K PG YTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSEIAQYAKVDNRQ--------YRLLKAATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD---TY 178
+ RK +G+R+P + I +L+++ PL+ T++ L D + P+ AD ++
Sbjct: 112 ----SHPSRKTIGLRVPENRIAHMLLEELGQPLLGTTL-ILPDEDL---PLTSADDIRSH 163
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+ +D V+D G EP+TV+D+T P ++RQG+G
Sbjct: 164 LEKQIDLVIDSGACSLEPTTVIDLTDDEQPVLVRQGRG 201
>gi|300312576|ref|YP_003776668.1| translation factor SUA5 [Herbaspirillum seropedicae SmR1]
gi|300075361|gb|ADJ64760.1| translation factor (SUA5) protein [Herbaspirillum seropedicae SmR1]
Length = 211
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 18/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P ++ +++ +G + +PTD+ YA+VC L + A+ER+RRI+ V+
Sbjct: 4 FFEIHPDNPQLRLIKQAAQIIHKGGLVALPTDSCYALVCQLDNKDAVERVRRIRGVDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y R +R +K PG YTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSEIAQYAKVDNRQ--------YRLLKAATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + I +L+++ PL+ T++ L D++ + ++ +
Sbjct: 112 ----SHPSRKTIGLRVPENRIAHMLLEELGQPLLGTTL-ILPDDDLPLTSAEDIRSHLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+D G EP+TV+D+T P ++RQG+G
Sbjct: 167 QIDLVIDSGACSLEPTTVIDLTDDEQPVLVRQGRG 201
>gi|167581361|ref|ZP_02374235.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia thailandensis
TXDOH]
Length = 209
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E+++ G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ T+ R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELATFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P AI A+L+ + PL+ T++ D++ + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPAHAITLALLESLGQPLLGTTLILPPDDDPLNDPEEIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
+D V+DGG EPSTV+D+TG P+++R G+GP
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGP 201
>gi|269138888|ref|YP_003295589.1| hypothetical protein ETAE_1537 [Edwardsiella tarda EIB202]
gi|387867561|ref|YP_005699030.1| hypothetical protein ETAF_1426 [Edwardsiella tarda FL6-60]
gi|267984549|gb|ACY84378.1| hypothetical protein ETAE_1537 [Edwardsiella tarda EIB202]
gi|304558874|gb|ADM41538.1| hypothetical protein ETAF_1426 [Edwardsiella tarda FL6-60]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 120/210 (57%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VVE+L +G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PENPQPRLIKQVVEVLHKGGVIVYPTDSGYALGCMLEEKNAMERICRIRRIDSNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y FR +K+ PG YTFIL ASKEVP++ +
Sbjct: 69 CRDLSELSSYAF--------VDNAAFRLLKNNTPGGYTFILKASKEVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L ++ PL+ST++ L D+E+ DP I + G + +D
Sbjct: 114 -EKRKTIGLRVPSNPIAQDLLAELGEPLMSTTL-MLPDSEFAESDPEEIQERLGKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+ GG +P+TV+D+T P ++R G G
Sbjct: 171 VIHGGYLGQQPTTVIDLTDDTPLVVRVGAG 200
>gi|359684338|ref|ZP_09254339.1| Sua5 family translation factor [Leptospira santarosai str.
2000030832]
Length = 202
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILSLHPINPENRKLQQISDKLLEGRVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y + FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------DAFRLMKKITPGPFTFITRANKHLP----RI 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q +L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQKLLKIHPNPLTSTSV--FANDEFVIEVDLLERIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST++D+TG I+R+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILDLTGDKMAIVREGKG 198
>gi|418677821|ref|ZP_13239095.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|400321011|gb|EJO68871.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
Length = 202
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 116/205 (56%), Gaps = 17/205 (8%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
KL+ + + L +G V + PTDT+YA+V D +S +E+L +KN+ ++PLS++C S+
Sbjct: 14 KLQQISDQLSQGKVYIFPTDTVYALVADSQSKPGVEKLYELKNIPKNQPLSLMCSSISVA 73
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + FR +K PGP+TFI +A+K +P R + K K +
Sbjct: 74 SNYIEHLSN-------DAFRLMKKITPGPFTFITSANKHLP----RVSFSNQK---EKQI 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRV 193
G+RIP+ Q +++ PL STSV ++E++++ + TYG ++ +VDGG+
Sbjct: 120 GIRIPDTIYLQELMKIHPNPLTSTSV--FANDEFIIEVDSLEKTYGSR-VEGIVDGGILK 176
Query: 194 AEPSTVVDMTGTYPKIIRQGKGPKL 218
E ST++D+TG IIR+GK +L
Sbjct: 177 VELSTILDLTGDEITIIREGKDFEL 201
>gi|407937994|ref|YP_006853635.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. KKS102]
gi|407895788|gb|AFU44997.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. KKS102]
Length = 211
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 21/219 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y EA P L+ LL++G + VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 3 QYFEAHPDNPQPRLLKQAALLLQKGGIVAVPTDSSYALVCHLDDKDAVDRLRRIRQVDEK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRR---- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +L+ APL++T++ + E + DP I Y
Sbjct: 111 ----VSHPSRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPAGETEPLNDPQEIRKRY-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+ +D +VD G EP+TVVD+ TG P ++R+G+G
Sbjct: 166 KLVDAIVDAGACPLEPTTVVDLTPMGTGGDPVVVREGRG 204
>gi|148652264|ref|YP_001279357.1| Sua5/YciO/YrdC/YwlC family protein [Psychrobacter sp. PRwf-1]
gi|148571348|gb|ABQ93407.1| translation factor SUA5 [Psychrobacter sp. PRwf-1]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V+ L + V PTDT YA C + S AIE+LR I+ ++ ++LCR L +I TY T
Sbjct: 20 VDALNRDQLIVYPTDTSYAFGCKIGSKEAIEKLRLIRQLDDKHQFTLLCRDLSEIATYAT 79
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
D Q F+ +K P P TFIL A+K+VPKK + +K +G+R+P
Sbjct: 80 ----VDNQQ----FKLLKASTPAPITFILDATKDVPKKL--------SHPKKKTIGIRVP 123
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I Q +L+ M P++++S+ L + DP I D G +D +++ GV + +T
Sbjct: 124 SNPIAQMLLEAMGEPILTSSLILLSTPLALDDPFDIEDKLG-NNIDVMINAGVLTTKLTT 182
Query: 199 VVDMTGTYPKIIRQGKG 215
+VDMT P+++RQG G
Sbjct: 183 IVDMTVFPPQLVRQGAG 199
>gi|359784968|ref|ZP_09288129.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. GFAJ-1]
gi|359297663|gb|EHK61890.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. GFAJ-1]
Length = 207
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ +E++++G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 YFQIHPENPQKRLIDQAIEIIRKGGVVAYPTDSGYALGCHLGEKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + +FR +K PGPYTFIL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNAVFRLLKAHTPGPYTFILDATTEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L + PL+S ++ + D+ M DP I + +G
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLAALGEPLMSVTLIPVGDDLPMSDPEEIRERFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG +P++V+D+ PKI+R+G+G
Sbjct: 168 -LDAIIDGGACHLDPTSVIDLRELPPKILREGRG 200
>gi|374385952|ref|ZP_09643454.1| Sua5/YciO/YrdC/YwlC family protein [Odoribacter laneus YIT 12061]
gi|373224897|gb|EHP47233.1| Sua5/YciO/YrdC/YwlC family protein [Odoribacter laneus YIT 12061]
Length = 201
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 27/216 (12%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP- 62
E +P+ D K+ V LK G V + PTDT+YA+ C + A++R+ +K V+P K
Sbjct: 7 EDNPNQRDILKITAV---LKRGGVIIYPTDTVYAMGCAINQVKAVQRVCALKGVKPEKAD 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S++CR L +I Y + +F+ +K LPGP+TFIL A+ ++P
Sbjct: 64 FSMICRDLSEIALY--------AKVSNEVFKIMKRHLPGPFTFILNATTKLP-------- 107
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYG 179
+ RK +GVRIP++ I +AI++++ PL++TS+ D+ E+M DP +I + Y
Sbjct: 108 -NVLMNRRKTIGVRIPDNYIVRAIVEELGHPLLTTSIH--DDDEIVEYMTDPELIHERYC 164
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STVVD TG ++RQG G
Sbjct: 165 -KSVDLVIDGGFGQNVASTVVDCTGDEISVLRQGIG 199
>gi|227326053|ref|ZP_03830077.1| hypothetical protein PcarcW_01496 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++ PL+ST++ ++ DP I + G + +D V+ GG +P+T
Sbjct: 125 SNPIALELLAALNEPLMSTTLMLPGNDFAESDPEEIQERLGKQ-VDLVIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++ R+G G
Sbjct: 184 VIDLTESVPRVAREGTG 200
>gi|422014102|ref|ZP_16360718.1| hypothetical protein OOA_05082 [Providencia burhodogranariea DSM
19968]
gi|414102124|gb|EKT63720.1| hypothetical protein OOA_05082 [Providencia burhodogranariea DSM
19968]
Length = 206
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L +G V V PTD+ YAI C L+ A++R+ RI+ ++ + +++
Sbjct: 9 PDNPQARLISQSVEILNKGGVIVYPTDSGYAIGCRLEDKDALQRICRIRQIDANHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y FR +K+ PG YTFIL +KEVP++ +
Sbjct: 69 CRDLSELSNY--------AHVDNTAFRLIKNNTPGNYTFILRGTKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L+++ PL+STS+ D+ DP I D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIARDLLEEVGEPLMSTSLILPGDDFTQSDPEAIRDLLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+TG ++R G G
Sbjct: 172 IHGGDIGQKPTTVIDLTGDGSVVVRVGTG 200
>gi|254423359|ref|ZP_05037077.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7335]
gi|196190848|gb|EDX85812.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7335]
Length = 219
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 124/227 (54%), Gaps = 31/227 (13%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P D + + + L++GA+ + PTDT+YAI CDL S SAI+R+R++K + KPL
Sbjct: 6 EVHPVTPDPRTINALRDDLRQGAIMLYPTDTVYAIGCDLSSKSAIKRVRQLKQLSNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+ LC SL ++ +Y H ++ +K +PGPYTF+L A+K VPK +
Sbjct: 66 TFLCASLSNVASY----------AHVTDPAYKIMKRLIPGPYTFLLPATKAVPKLVINPK 115
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-----KDNEWMVDPVVIAD 176
R+ G+R+PN +C ++++ + P+ISTS + +D+ + V++ D
Sbjct: 116 --------RRTTGIRVPNSPLCLSLIEALGNPIISTSAASIVSRSTEDDIDTLSKVMLFD 167
Query: 177 TYGPEGLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ +D VVD + + ST+VD+T P +IR+G+G W E
Sbjct: 168 QIE-KLVDVVVDSNTELGHQVSTIVDVTDGSPLVIRRGQG----WQE 209
>gi|421079577|ref|ZP_15540515.1| YciO family protein [Pectobacterium wasabiae CFBP 3304]
gi|401705663|gb|EJS95848.1| YciO family protein [Pectobacterium wasabiae CFBP 3304]
Length = 206
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 113/197 (57%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++ PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALDLLAALNEPLMSTTLMLPGNDFAESDPEEIQEELG-KLVDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P+I+R+G G
Sbjct: 184 VIDLTESVPRIVREGTG 200
>gi|444918460|ref|ZP_21238531.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Cystobacter fuscus DSM 2262]
gi|444709826|gb|ELW50824.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Cystobacter fuscus DSM 2262]
Length = 204
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 23/203 (11%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ V++L G V PTDT Y + CDL S IERL ++K + KPLSILC L D+
Sbjct: 20 VQRAVDILSGGGVIAYPTDTYYGLGCDLGSKKGIERLYKLKGRDRKKPLSILCPDLSDVA 79
Query: 75 TYTTGFPRGDGQGHANIF--RAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
Y H + F R +K PG +TFIL A++ VP+ + S +K
Sbjct: 80 KYA----------HVSNFAYRTMKGLTPGAFTFILEATRLVPEVMM---------SKQKQ 120
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVR 192
VG+R+P+ + +A+ + PL++TS + E + D I D G GLD ++D GV
Sbjct: 121 VGIRVPDSELARALAAGLGRPLVTTSATD-AEGEPLTDARSIKDALG-HGLDLILDAGVT 178
Query: 193 VAEPSTVVDMTGTYPKIIRQGKG 215
+ E STVV + G +++RQGKG
Sbjct: 179 LLEASTVVSLIGDQLEVLRQGKG 201
>gi|374702032|ref|ZP_09708902.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas sp. S9]
Length = 208
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P S ++ E+++ G V V PTD+ YAI C L +A+ER+RR++ ++
Sbjct: 4 FFQVHPENPQSRLIKQAAEIIRGGGVAVYPTDSSYAIGCRLGDKNALERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L + T+ + FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSQLSTF--------AKVDTGAFRLLKTHTPGPYTFILNATREVPRIML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ R+ VG+R+P+ I QA+L+++ P++S S+ + M DP +
Sbjct: 113 -----HAKRRTVGLRVPSHPIAQALLEELGEPIMSVSLIMPGETLPMSDPYEMRSLL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG E STV++++ P+I+R G G
Sbjct: 167 HVELIIDGGFGGLEASTVINLSEAEPEIVRVGCG 200
>gi|123442466|ref|YP_001006445.1| hypothetical protein YE2207 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089427|emb|CAL12275.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 206
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNPAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKEYLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR+G G
Sbjct: 184 VIDLTDSSPEVIREGAG 200
>gi|377821198|ref|YP_004977569.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. YI23]
gi|357936033|gb|AET89592.1| Sua5/YciO/YrdC/YwlC [Burkholderia sp. YI23]
Length = 209
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE+++ G + +PTD+ YA+ C L A ERLRRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLINQAVEIIRGGGLVALPTDSSYALACHLDDKDAAERLRRIRGIDDKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + F D Q +R +K PGPY F+L A+KEVP++
Sbjct: 64 LLSLLVRDLSEL----SNFAMVDNQQ----YRLIKSVTPGPYVFVLQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I +L+ + PL++T++ D E + DP I + +
Sbjct: 112 ----SHPSRKTIGLRVPDHRITLDLLEALGEPLLATTLILPPDTEPINDPDEIRERLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+D G AEPSTV+D++ P ++R G+G
Sbjct: 168 -IELVIDSGACPAEPSTVIDLSSGEPVLVRAGRG 200
>gi|350564083|ref|ZP_08932902.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalimicrobium aerophilum
AL3]
gi|349778083|gb|EGZ32442.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalimicrobium aerophilum
AL3]
Length = 207
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+E P + VE L+ G + PT++ YA+ C L + ER+R+++ ++
Sbjct: 6 IYIEVHPENPQPRLITQAVERLEAGGIVAFPTESGYALGCLLDNKEGAERIRQLRRLDDK 65
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+++C L + Y G+ Q FR +K LPGPYTF+L AS+EVP++
Sbjct: 66 HDFTLMCPDLSHLSHYAK---VGNVQ-----FRYLKAHLPGPYTFLLPASREVPRRI--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ + RK +G+R+ + +CQ +L D PL+S S+ D M D I +T
Sbjct: 115 -----QNAKRKTIGLRVSPNKVCQTLLSYFDKPLMSVSLILPGDTLPMADAWSIKETLES 169
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ LD ++DGG EP+T++D T P ++RQG+G
Sbjct: 170 Q-LDVIIDGGFGGYEPTTIIDFTDDVPVLVRQGQG 203
>gi|443476563|ref|ZP_21066463.1| translation factor SUA5 [Pseudanabaena biceps PCC 7429]
gi|443018472|gb|ELS32715.1| translation factor SUA5 [Pseudanabaena biceps PCC 7429]
Length = 224
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 36/228 (15%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + +V+ L++GA+ + PTDT++AI CDL S SA+E +R++K + KPL+ L
Sbjct: 9 PDNPQARTIAQIVDALRDGAIMLYPTDTVFAIGCDLMSKSAVESVRKLKQMSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +AN +R +K +PGP+TFIL A+K VPK +
Sbjct: 69 CSSLSNIAEYA-------NVSNAN-YRTMKSLVPGPFTFILPATKLVPKLVLNPK----- 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-----------------NEWMV 169
RK G+R+PN + QA+++ + P+ISTS +D + +
Sbjct: 116 ---RKTTGIRVPNHMVSQALIEALGNPVISTSANLQEDALDNLKLDYQGKGSKQRHVSTL 172
Query: 170 DPVVIADTYGPEGLDFVVDGGVRVA-EPSTVVDMTGTY-PKIIRQGKG 215
+ + D Y + +D +VD G ++ E ST+VD+T P+I+RQG G
Sbjct: 173 SKIELFD-YFYKLVDLIVDDGSDLSYEVSTIVDLTDDLNPQILRQGLG 219
>gi|254492266|ref|ZP_05105440.1| Sua5/YciO/YrdC/YwlC family protein [Methylophaga thiooxidans
DMS010]
gi|224462591|gb|EEF78866.1| Sua5/YciO/YrdC/YwlC family protein [Methylophaga thiooxydans
DMS010]
Length = 207
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ ++++ G + V PTD+ YA+ C + + ++R+RRI+ ++
Sbjct: 4 FFQIHPDNPQLRLIKQACDIIRRGGLVVYPTDSGYALGCQIGDKNTMDRIRRIRQLDADH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY + + +FR +K PG YTF+L A+KEVPK+
Sbjct: 64 NFTLVCRDLSELSTY--------AKFNNAVFRLLKAHTPGSYTFVLPATKEVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+RIP I A+L+++D PL+S+++ D+ M D I D G +
Sbjct: 112 ----QHPKRKTIGLRIPEHTIALALLEELDEPLMSSTLILPGDDLPMTDAEDIVDAIG-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG A P+TV++ P++ R G+G
Sbjct: 167 HVDLIIDGGACGAIPTTVIEFIDDVPEVTRYGQG 200
>gi|423013161|ref|ZP_17003882.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter xylosoxidans
AXX-A]
gi|338783898|gb|EGP48251.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter xylosoxidans
AXX-A]
Length = 208
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++++ P+ L+ + L +G + VPTD+ YA+V L +A + LRR++ ++
Sbjct: 3 LHLDIHPANPQPRLLKQAAQWLNDGGLVAVPTDSSYAVVARLDDKNAADGLRRLRGLDDR 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEI----GHFARVDNRQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ +L++M APL+ST++ + + + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDHAVMLGLLEQMGAPLLSTTLIPKDETDALNDAEAIRERYDH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E L ++D G P+TV+D+TG P ++R G+G
Sbjct: 167 E-LAAIIDAGACPHSPTTVIDLTGDDPVVVRVGRG 200
>gi|334143836|ref|YP_004536992.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalimicrobium cyclicum
ALM1]
gi|333964747|gb|AEG31513.1| Sua5/YciO/YrdC/YwlC family protein [Thioalkalimicrobium cyclicum
ALM1]
Length = 207
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+E P L VE L+ G + PT++ YA+ C L + ER+R+++ ++
Sbjct: 6 LYIEVHPENPQPRLLAQAVERLEAGGIVAFPTESGYALGCLLDNKDGAERIRQLRRLDDK 65
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+++C L + Y G+ Q FR +K LPGPYTF+L AS+EVP++
Sbjct: 66 HDFTLMCPDLSHLSHYAK---VGNVQ-----FRYLKAHLPGPYTFVLPASREVPRRI--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+ + +CQ +L D PL+S S+ D+ M D I +T
Sbjct: 115 -----QNPKRKTIGLRVSPNQVCQTLLSYFDKPLMSVSLILPGDSLPMADAWSIKETLES 169
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ LD ++DGG EP+T++D T P+++R G+G
Sbjct: 170 Q-LDVIIDGGFGGYEPTTIIDFTDDVPQLVRLGQG 203
>gi|332283421|ref|YP_004415332.1| translation factor [Pusillimonas sp. T7-7]
gi|330427374|gb|AEC18708.1| putative translation factor [Pusillimonas sp. T7-7]
Length = 208
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + L+ +LL +G + VPTD+ YA+V L A + LRR++ ++ L++L
Sbjct: 9 PQNPQARLLKQAGQLLADGGLVAVPTDSSYAVVARLDDRPAADALRRLRGLDERHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I F + D + +R +K PGP+TFIL A++EVP++
Sbjct: 69 CRDLAEIGH----FAKVDNRQ----YRFLKMATPGPWTFILEATREVPRRV--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P+ + A+++ PL+ST++ + + M D I D Y + L V
Sbjct: 113 HPSRKTIGIRVPDHKVTLALIEAAGTPLMSTTLIPEDEEDPMNDGQAIYDRYANQ-LAAV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG V P+TV+D+TG P++IR+G+G
Sbjct: 172 IDGGACVLAPTTVLDLTGASPEVIRRGQG 200
>gi|95929617|ref|ZP_01312359.1| Sua5/YciO/YrdC/YwlC [Desulfuromonas acetoxidans DSM 684]
gi|95134314|gb|EAT15971.1| Sua5/YciO/YrdC/YwlC [Desulfuromonas acetoxidans DSM 684]
Length = 204
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 23/218 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P ++ VVE L+ V PTDT+Y + CD+ + I+++ ++K +
Sbjct: 1 MMLSINPDNPQQRYIDQVVECLRRDGVIAYPTDTIYGVGCDIFNKKGIKKIYQLKRRDVK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCV 118
KP S +C L +I Y H + F+ +K LPGPYTF+L AS+ VP +
Sbjct: 61 KPFSFICSDLSEISRY----------AHVSNMAFKIMKRHLPGPYTFVLDASRVVPDLVM 110
Query: 119 RYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTY 178
+ ++ VG+R+P++AI I++++ PL++TS + +E DP +I D +
Sbjct: 111 ---------TKQRTVGIRMPDNAITLEIVRQLGHPLVTTSAN-ISGDETYQDPSLIHDDW 160
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
G + LD VVDGG +PSTV+ + +++RQG GP
Sbjct: 161 G-KHLDMVVDGGRLYGDPSTVISLRNDQIEVLRQGCGP 197
>gi|427738090|ref|YP_007057634.1| translation factor SUA5 [Rivularia sp. PCC 7116]
gi|427373131|gb|AFY57087.1| translation factor SUA5 [Rivularia sp. PCC 7116]
Length = 217
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 34/229 (14%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E + L+ GAV + PTDT+YAI CDL SA++R+R+IK + KPL+ L
Sbjct: 9 PDNPQIRRIEEIKGALQSGAVMLYPTDTVYAIGCDLSVKSAVQRVRQIKQLANEKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +KH +PG YTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVNNAA------YRIMKHLIPGTYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE----WM-VDPVVIADTYGP- 180
RK G+R+P++ +C ++L+ + P+ISTS + D+E W+ +P+ + +
Sbjct: 113 NPKRKTTGIRVPDNPVCLSLLEALGNPIISTSARIPPDDEDENAWLEQEPLSRIELFDRM 172
Query: 181 EGL-DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKGPKLYWMEEE 224
EGL D ++D G EP ST++D+T P ++R+G G W E E
Sbjct: 173 EGLVDVIIDTG---KEPGVQVSTILDLTEEQPTVVRKGLG----WEEVE 214
>gi|387128279|ref|YP_006296884.1| hypothetical protein Q7A_2439 [Methylophaga sp. JAM1]
gi|386275341|gb|AFI85239.1| hypothetical protein Q7A_2439 [Methylophaga sp. JAM1]
Length = 208
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 123/222 (55%), Gaps = 18/222 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ +++ G + V PTD+ YA+ C L A++R+RR++ ++
Sbjct: 4 YFQIHPDNPQPRLIKQACQIIMSGGLVVYPTDSGYALGCHLGDKGAMDRIRRLRQLDADH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + + +FR +K PGPYTF+L A+KEVP++
Sbjct: 64 NFTLVCRDLSELSVY--------AKFNNAVFRLIKAHTPGPYTFVLPATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+RIP + I A+L++++ PL+S+++ + M + IAD +
Sbjct: 112 ----QHPKRKTIGLRIPVNNIALALLEELNEPLMSSTLILPGETMPMTEADEIADQLS-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLYWME 222
+D ++DGG +EP+TVV+ P+++R G G P+ + +E
Sbjct: 167 HVDLIIDGGACGSEPTTVVEFVNDLPEVVRVGMGDPEPFEVE 208
>gi|253989544|ref|YP_003040900.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253780994|emb|CAQ84156.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++ K G V V PTD+ YAI C L+ A+ R+ RI+ ++ +++CR L +I TY
Sbjct: 21 VDVFKNGGVVVYPTDSGYAIGCHLEDKDAMTRICRIRQLDNHHNFTLMCRDLSEISTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNSAFRLIKNNTPGNYTFILRATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+++ PL+STS+ ++ DP I D G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLEQVGEPLMSTSLILPGNDFAESDPEEIKDNLG-KLVDLIIHGGYLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T P +IR+G G
Sbjct: 184 VIDLTDDTPVVIRKGVG 200
>gi|427728743|ref|YP_007074980.1| Sua5/YciO/YrdC/YwlC family protein [Nostoc sp. PCC 7524]
gi|427364662|gb|AFY47383.1| Sua5/YciO/YrdC/YwlC family protein [Nostoc sp. PCC 7524]
Length = 219
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 115/224 (51%), Gaps = 28/224 (12%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P S ++E + L GAV + PTDT+YAI CDL SA+ER+R+IK + KP
Sbjct: 5 IAVHPENPQSRRIEEIRATLSSGAVMLYPTDTVYAIGCDLNVKSAVERVRQIKQLANDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ LC SL ++ TY F +R +K +PG YTF+L A+K VPK
Sbjct: 65 LTFLCPSLSNVATY--AFVSDTA------YRIMKRLIPGTYTFLLPATKLVPK------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD----------NEWMVDPV 172
+ RK G+R+PN +C A+L + P+ISTS D +E + V
Sbjct: 110 -LVQSPKRKTTGIRVPNHNVCLALLSALGNPIISTSAHLPPDEVDNGKVSLHSELRLSRV 168
Query: 173 VIADTYGPEGLDFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKG 215
+ D + +D +VD G E ST++D+TG P I R+G G
Sbjct: 169 ELFDRLD-KLVDVIVDTGQEPTYEVSTILDLTGDEPMITRRGLG 211
>gi|296131063|ref|YP_003638313.1| Sua5/YciO/YrdC/YwlC family protein [Cellulomonas flavigena DSM
20109]
gi|296022878|gb|ADG76114.1| Sua5/YciO/YrdC/YwlC family protein [Cellulomonas flavigena DSM
20109]
Length = 205
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 27/224 (12%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P+ + VV +L++ AV PTD++YA+ L +H ER+RRI+N++
Sbjct: 4 YFDVHPTDPQPRSIAQVVAMLRDDAVIAYPTDSMYALGTRLGNHDGAERIRRIRNLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + FRA+K PGPYTFIL A+ EVP++
Sbjct: 64 HFTLVCCDFAQLGQLV--------HLDNSAFRAIKSATPGPYTFILPATPEVPRRLA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV-----KWLKDNEWMVDPVVIAD 176
+ ++ VGVRIP+D + AIL+++ PL+S+S+ W W + +
Sbjct: 113 -----HPKKRSVGVRIPDDPVALAILRELGEPLVSSSLLVPGHDWPMSEGWQIKEEL--- 164
Query: 177 TYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW 220
+ LD VVD G R +EP+TVVD T P+++R+G G L +
Sbjct: 165 ---DDVLDAVVDAGDRGSEPTTVVDWTDGAPEVVREGAGDPLRF 205
>gi|398855587|ref|ZP_10612069.1| putative translation factor (SUA5) [Pseudomonas sp. GM80]
gi|398230637|gb|EJN16652.1| putative translation factor (SUA5) [Pseudomonas sp. GM80]
Length = 222
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YAI C + +AIER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGNY--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D +VDGG + STV+D+TG P+++R G G +M E
Sbjct: 181 -VDLIVDGGFGGIKASTVIDLTGDDPEVVRVGCGDPTPFMVE 221
>gi|363581633|ref|ZP_09314443.1| hypothetical protein FbacHQ_09130 [Flavobacteriaceae bacterium
HQM9]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++ V +LK G + + PTDT+Y + CD+ S A+ R+ +IK V+ K S LC+ L +
Sbjct: 16 QIAEAVNVLKSGGLIIYPTDTVYGLGCDITSVKALNRIAKIKGVKLEKANWSFLCKDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q + F+ +K C PGP+TFIL + ++P + +K
Sbjct: 76 LSDYVR-------QIDSTTFKLLKRCTPGPFTFILPGNNQLP----------TVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P++ IC +++ + P+ISTS+ + E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRVPDNKICYDLVEVLGNPIISTSIHDEDEILEYTTDPELILEKWN-NLVDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
PST+VD+TG P+IIR GKG
Sbjct: 178 GDNIPSTIVDVTGDTPEIIRTGKG 201
>gi|384081928|ref|ZP_09993103.1| putative translation factor [gamma proteobacterium HIMB30]
Length = 209
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ +L++EG V V+PTD+ YA+ C L++ ++ +R+I+ ++
Sbjct: 4 FFAIHPDNPQIRLIQQATDLIREGGVVVLPTDSGYALGCALENKRGVDVIRQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R + Q +R +K PG YTFIL A++EVP++ +R
Sbjct: 64 NFTLLCRDLSEISVYA----RVENQE----YRLLKSHTPGAYTFILEATREVPRRLLR-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I +L+ + PL+++++ ++ M DP I + G +
Sbjct: 114 ------PKRKQIGIRVPDNRIALDLLENVGEPLMTSTLMLPAEDLPMTDPYEINEVLGHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
L+ V+DGG E +TV+D+T P I RQG G + E+
Sbjct: 168 -LELVIDGGFCGFEGTTVIDLTQDVPLITRQGAGDASAFSEQ 208
>gi|384098523|ref|ZP_09999637.1| translation factor sua5 [Imtechella halotolerans K1]
gi|383835218|gb|EID74645.1| translation factor sua5 [Imtechella halotolerans K1]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 20/200 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VV++L++G + + PTDT+Y + CD+ + A+ER+ RIK ++ K S +C L +I Y
Sbjct: 20 VVKVLRDGGIIIYPTDTVYGLGCDITNTKALERIARIKGIKLDKANFSFVCADLSNISDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q F+ +K LPGPYTFIL + +PK ++ +K VG+R
Sbjct: 80 VK-------QIDTPTFKILKRALPGPYTFILPGNNNLPK----------EFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGVRVAE 195
+P++ I Q +++++ P++STS+ D E+ DP +I + +G +D V+DGG
Sbjct: 123 VPDNTIAQLLVKELGNPIVSTSIHDEDDLLEYTTDPELIFEKWG-NLVDMVIDGGYGDNV 181
Query: 196 PSTVVDMTGTYPKIIRQGKG 215
STV+D++ P ++R+GKG
Sbjct: 182 ASTVIDLSEGEPVVVREGKG 201
>gi|398967145|ref|ZP_10681773.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM30]
gi|398145029|gb|EJM33832.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM30]
Length = 209
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + +AIER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGNY--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGGIKASTVIDLTGDDPEVIRVGCGDPAPFMVE 208
>gi|224369573|ref|YP_002603737.1| hypothetical protein HRM2_24790 [Desulfobacterium autotrophicum
HRM2]
gi|223692290|gb|ACN15573.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 202
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 19/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P + +V+ L++G + PTDT Y I CD+ + AIE++ +IK +
Sbjct: 1 MLIYVNPDNPQPRLISQIVDALRQGGIIAYPTDTHYGIGCDIMNKKAIEKVYQIKQRSKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+P S +C L+ I Y + +R +K LPGPYTFIL SK VPK +
Sbjct: 61 QPFSFICADLKHISEY--------AKVSTFAYRNMKRLLPGPYTFILQGSKLVPKMML-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK G+R+P++AI AI +++ P++STS D+ DP ++ D +G
Sbjct: 111 -------TKRKTAGIRVPDNAIALAIAKELGNPVLSTSATG-PDDRPFEDPSLLHDWFG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L+ VVDGG S+VV + P+IIR G G
Sbjct: 162 QRLELVVDGGPVPGTDSSVVSLIDDVPEIIRYGAG 196
>gi|422022822|ref|ZP_16369328.1| hypothetical protein OO7_09752 [Providencia sneebia DSM 19967]
gi|414094552|gb|EKT56216.1| hypothetical protein OO7_09752 [Providencia sneebia DSM 19967]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++ +G V V PTD+ YAI C L+ A++R+ RI+ ++ + +++
Sbjct: 9 PDNPQTRLISQSVEIINQGGVIVYPTDSGYAIGCRLEEKDAVQRICRIRQLDANHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y + FR +K+ PG YTFIL +KEVP++ +
Sbjct: 69 CRDLSELSNY--------AHVDNSAFRLIKNNTPGNYTFILRGTKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L+ + PL+STS+ D+ DP I D G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIARDLLEAVGEPLMSTSLIMPGDDFTQSDPEEIRDLLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P ++R G G
Sbjct: 172 IHGGYIGQKPTTVIDLTDDSPIVVRVGTG 200
>gi|333368245|ref|ZP_08460455.1| Sua5/YciO/YrdC/YwlC family protein [Psychrobacter sp. 1501(2011)]
gi|332977635|gb|EGK14403.1| Sua5/YciO/YrdC/YwlC family protein [Psychrobacter sp. 1501(2011)]
Length = 207
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 17/217 (7%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VV+ L + + PTDT YA C + S AIE+LR I+ ++ ++L
Sbjct: 8 PENPQPRLISQVVDALNRDQLIIYPTDTSYAFGCKIGSKEAIEKLRLIRQLDDRHQFTLL 67
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY T D Q F+ +K P P TFIL A+K+VPKK
Sbjct: 68 CRDLSEIATYAT----VDNQQ----FKLLKASTPSPITFILDATKDVPKKL--------S 111
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ +K +G+R+P++ I Q IL M P++++S+ + DP I D G +D +
Sbjct: 112 HPKKKTIGIRVPSNPISQMILDAMGEPILTSSLILPDMQLALDDPFDIEDKLG-NNIDVM 170
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
++ GV + +T++DMT + P++IRQG G ++E
Sbjct: 171 INAGVLTTKLTTIIDMTVSPPELIRQGAGDASLLIDE 207
>gi|197285200|ref|YP_002151072.1| dsRNA-binding protein [Proteus mirabilis HI4320]
gi|227355625|ref|ZP_03840019.1| RNA binding protein [Proteus mirabilis ATCC 29906]
gi|425068151|ref|ZP_18471267.1| Sua5/YciO/YrdC/YwlC family protein [Proteus mirabilis WGLW6]
gi|425072453|ref|ZP_18475559.1| Sua5/YciO/YrdC/YwlC family protein [Proteus mirabilis WGLW4]
gi|194682687|emb|CAR42839.1| putative dsRNA-binding protein [Proteus mirabilis HI4320]
gi|227164232|gb|EEI49125.1| RNA binding protein [Proteus mirabilis ATCC 29906]
gi|404597123|gb|EKA97629.1| Sua5/YciO/YrdC/YwlC family protein [Proteus mirabilis WGLW4]
gi|404600534|gb|EKB00969.1| Sua5/YciO/YrdC/YwlC family protein [Proteus mirabilis WGLW6]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +E ++L++G V + PTD+ YAI C L + A+ R+ RI+ ++ +++
Sbjct: 9 PDNPQARLIEQSADVLRKGGVVIYPTDSGYAIGCCLDNKDAMTRICRIRQLDKHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY +FR +K+ PG YTFIL A+K+VPK+ +
Sbjct: 69 CRDLSEIATY--------AYVDNVVFRLIKNNTPGNYTFILKATKDVPKRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ + PL+STS+ ++ DP I D G + +D V
Sbjct: 114 -DKRKTIGLRVPSNPIALALLENIGEPLMSTSLILPGNDFAESDPEEINDLLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P I+R+G G
Sbjct: 172 IHGGYLGQKPTTVIDLTEDSPVIVREGMG 200
>gi|424922022|ref|ZP_18345383.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens R124]
gi|404303182|gb|EJZ57144.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens R124]
Length = 222
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + +AIER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGNY--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVIDLTGDDPEVIRVGCGDPAPFMVE 221
>gi|386828501|ref|ZP_10115608.1| Sua5/YciO/YrdC/YwlC family protein [Beggiatoa alba B18LD]
gi|386429385|gb|EIJ43213.1| Sua5/YciO/YrdC/YwlC family protein [Beggiatoa alba B18LD]
Length = 216
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + V +++ G V V PTD+ YA+ C + A+ER+RRI++ +
Sbjct: 3 LFLSIHPQNPQARLVSQVATVIRNGGVIVYPTDSCYALGCHIGDKDAMERIRRIRDADKD 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+++CR L +I TY + + FR +K PG YTF+L A+ EVP++
Sbjct: 63 HNFTLVCRDLSEIATY--------AKVENSAFRLMKSLTPGAYTFLLKATHEVPRRL--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
++ RK +G+R+P++ IC AIL+ + P++S ++ DP I
Sbjct: 112 -----QHPKRKTIGLRVPDNKICLAILEALGEPIMSATLILPNAEMPETDPDEILQRLDK 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +VDGG EP+T++D+ P I+R+GKG
Sbjct: 167 Q-VDLIVDGGNCGFEPTTIIDLIEDPPAILRRGKG 200
>gi|386287699|ref|ZP_10064870.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium BDW918]
gi|385279209|gb|EIF43150.1| Sua5/YciO/YrdC/YwlC family protein [gamma proteobacterium BDW918]
Length = 209
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ ++++ G V PTD+ YA+ C L +A+ER+R I+ ++
Sbjct: 4 FFQIHPENPQARLIKQAADIIRGGGVVAYPTDSAYALGCHLGDKNALERVRAIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L ++ TY + + FR +K +PGPYTFIL A+ EVPK+ ++
Sbjct: 64 NFTLMCSDLSELGTYA--------KVDNSAFRLLKAHIPGPYTFILRATPEVPKRLLQ-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK VG+R+P + IC +L ++ PL+S S+ + M DP I DT G
Sbjct: 114 ------PKRKSVGLRVPANQICLDLLAELGEPLMSVSLILPGEELPMTDPYDIRDTIG-- 165
Query: 182 GL-DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GL D V+DGG E ++V+D+ P IIR+G G
Sbjct: 166 GLVDLVIDGGYCGMEATSVIDLVDEVPVIIRRGLG 200
>gi|186681197|ref|YP_001864393.1| Sua5/YciO/YrdC/YwlC family protein [Nostoc punctiforme PCC 73102]
gi|186463649|gb|ACC79450.1| Sua5/YciO/YrdC/YwlC family protein [Nostoc punctiforme PCC 73102]
Length = 219
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 26/219 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E + L GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQIRRIEEIKSALSSGAVMLYPTDTVYAIGCDLNAKSAVERVRQIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDTA------YRIMKRLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE----WMVDPVVIADTYG--- 179
RK G+R+PN +C +L + P+ISTS D +DP +
Sbjct: 113 SPKRKSTGIRVPNHTVCLELLAALGNPIISTSAHLPADEADNGMIRIDPETVQSRVELFD 172
Query: 180 --PEGLDFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +VD G E ST++DMTG IIR+G G
Sbjct: 173 RLDKLVDIIVDTGEEPTYEVSTILDMTGDEAAIIRRGLG 211
>gi|212212644|ref|YP_002303580.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii CbuG_Q212]
gi|212011054|gb|ACJ18435.1| Sua5/YciO/YrdC/YwlC family protein [Coxiella burnetii CbuG_Q212]
Length = 204
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 19/214 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P + ++ VE +K G + TD+ YA+ C L + S ER+RR++ + + P
Sbjct: 4 IHIHPDNPQARLIKQAVETVKTGGILAYSTDSGYALGCGLGNKSGAERIRRLRQLNKAHP 63
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHAN-IFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y AN +FR +K PGPYTFIL+A++ VP++
Sbjct: 64 FTLLCRDLSEIAVYAR---------IANPVFRFLKAHTPGPYTFILSATQAVPRQL---- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ RK +G+R+P+ + QAIL+++ PL++ ++ + +W + +
Sbjct: 111 ----QHPKRKTIGIRVPDHRVIQAILEQLQEPLMNVTLIF-PGEQWAPSEISEREDELAA 165
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VD GV EP+T++D+ P I+R+GKG
Sbjct: 166 QVDLIVDSGVCGVEPTTLIDLVDGEPTILREGKG 199
>gi|294670991|ref|ZP_06735847.1| hypothetical protein NEIELOOT_02697 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307478|gb|EFE48721.1| hypothetical protein NEIELOOT_02697 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 206
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 20/220 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E+++ G V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAAEIVRNGGVIAYPTDSCYALGCRLGDKEAMERILRIRQIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLGELGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L ++ PL+S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNKIALALLNELGEPLLSCTLMLPEDGEPLSDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKGPKLYW 220
+D V+DGG EP+TVVDMT GT ++R+G+G K +
Sbjct: 167 SVDLVIDGGWCGMEPTTVVDMTDGTV--LVREGRGDKAVF 204
>gi|398986958|ref|ZP_10691782.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM24]
gi|398151397|gb|EJM39948.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM24]
Length = 222
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YAI C + +AIER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGNY--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P+++R G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVIDLTGDDPEVVRVGCGDPTPFMVE 221
>gi|381189060|ref|ZP_09896617.1| yrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Flavobacterium frigoris PS1]
gi|379648985|gb|EIA07563.1| yrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Flavobacterium frigoris PS1]
Length = 206
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + VV++LK+G + + PTDT+Y + CD+ + A+ER+ RIK ++ K
Sbjct: 4 FIKIYPDKPSEAAIAKVVKVLKDGGLIIYPTDTVYGLGCDITNTKALERIARIKGIKLDK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFVCHDLSNLSDYVK-------QIDTATFKILKRALPGPYTFILPGNNSLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
++ + VG+R+P+++I I++++ P++STS+ D E+ DP +I + +
Sbjct: 112 -----EFKKKTTVGIRVPDNSIALEIVRQLGNPIVSTSIHDDDDVIEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST++D++G P+IIR+GKG
Sbjct: 166 QNLVDMVIDGGYGDNVGSTIIDLSGDEPEIIREGKG 201
>gi|260062809|ref|YP_003195889.1| Sua5/yciO/yrdC family protein [Robiginitalea biformata HTCC2501]
gi|88784377|gb|EAR15547.1| putative Sua5/yciO/yrdC family protein [Robiginitalea biformata
HTCC2501]
Length = 207
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 22/201 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VVE ++G + + PTDT+Y + CD+ + A+ERL RIK V+ K S +C L ++ Y
Sbjct: 20 VVEAFRDGGLVIYPTDTVYGLGCDITNSRALERLARIKGVKLHKANWSFICEDLSNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q F+ +K LPGPYTFIL + +P+ + +K VG+R
Sbjct: 80 VR-------QIDTQTFKILKRALPGPYTFILPGNNNLPR----------DFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGL-DFVVDGGVRVA 194
+P++ I A++ + P++STS++ D E+ DP +I + + E L D VVDGG
Sbjct: 123 VPDNRIAHALVAGLGRPIVSTSIRDEDDVLEYTTDPELIYEKW--ENLVDVVVDGGYGGN 180
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
STV+D++G P+I+R+GKG
Sbjct: 181 VASTVIDLSGPEPEIVREGKG 201
>gi|441499294|ref|ZP_20981480.1| Sua5 YciO YrdC YwlC family protein [Fulvivirga imtechensis AK7]
gi|441436827|gb|ELR70185.1| Sua5 YciO YrdC YwlC family protein [Fulvivirga imtechensis AK7]
Length = 209
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 21/217 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + K+E +V +L++G V + PTDT+Y I CDL + A++R+ RIK ++P
Sbjct: 5 FIKLYPENPEIDKIEHIVNVLRDGGVIIYPTDTIYGIGCDLFNKKAVDRVCRIKGIKPKN 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
LS +C L DI Y R D F+ +K LPGP+TFIL ++ VPK
Sbjct: 65 FNLSFVCYDLSDISHYVK---RID----TPTFKVLKKALPGPFTFILESNSNVPK----- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTY 178
+ +K VG+RIP++ I +AI++ + P+++TS++ KD E+ DP +I + +
Sbjct: 113 ----ILDTNKKTVGIRIPDNNIPRAIVKTLGHPIVTTSIRN-KDEIVEYTTDPEIIFEEF 167
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PSTVVD T ++R+G G
Sbjct: 168 K-HVVDIVIDGGFGGNIPSTVVDCTQEQFVVLREGLG 203
>gi|311746055|ref|ZP_07719840.1| Sua5/YciO/YrdC/YwlC family protein [Algoriphagus sp. PR1]
gi|126576272|gb|EAZ80550.1| Sua5/YciO/YrdC/YwlC family protein [Algoriphagus sp. PR1]
Length = 209
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 19/207 (9%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRS 69
D K+ + LL++GAV + PTDT+Y + CD+ + A+ER+ RIK + P K S +C
Sbjct: 14 DPKKIREIAALLRDGAVVIYPTDTVYGLGCDITNTRAVERICRIKGINPRKHNFSFVCAD 73
Query: 70 LRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSL 129
L I YT + +F+ +K LPGPYTFIL A+ +VPK +S
Sbjct: 74 LSTISHYTRVITKP-------VFKMMKKALPGPYTFILEANTQVPK---------ILHSK 117
Query: 130 RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVD 188
+K VG+R+P+ + + +++++ PL+STS++ + E+ DP +I + Y +D V+
Sbjct: 118 KKTVGIRVPDHKVPRMLVEELGQPLLSTSIRDEDEVLEYSTDPELIFEKY-EHLVDVVIH 176
Query: 189 GGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GG STV+D TG +IIR+G G
Sbjct: 177 GGFGQNIGSTVLDCTGHEMEIIREGLG 203
>gi|212710704|ref|ZP_03318832.1| hypothetical protein PROVALCAL_01771 [Providencia alcalifaciens DSM
30120]
gi|422018038|ref|ZP_16364597.1| hypothetical protein OO9_05010 [Providencia alcalifaciens Dmel2]
gi|212686401|gb|EEB45929.1| hypothetical protein PROVALCAL_01771 [Providencia alcalifaciens DSM
30120]
gi|414105163|gb|EKT66726.1| hypothetical protein OO9_05010 [Providencia alcalifaciens Dmel2]
Length = 206
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L +G V V PTD+ YAI C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PDNPQARLISQSVEILNKGGVVVYPTDSGYAIGCRLEEKNALERICRIRKLDSNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y +FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSNY--------AHVDNTVFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L+ + PL+STS+ D+ DP I D + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIARDLLEAVGEPLMSTSLILPGDDFTQSDPEEIRDLLDKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D T P + R G G
Sbjct: 172 IHGGYIGQKPTTVIDFTDDTPVVARVGTG 200
>gi|163755495|ref|ZP_02162614.1| translation factor [Kordia algicida OT-1]
gi|161324408|gb|EDP95738.1| translation factor [Kordia algicida OT-1]
Length = 207
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 121/206 (58%), Gaps = 24/206 (11%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VV++L++G + + PTDT+Y + CD+ + A+ER+ RIK ++ K S +C L
Sbjct: 16 EIKKVVDILRDGGLVIYPTDTVYGLGCDITNTKALERIARIKGIKLEKANFSFICNDLSH 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
I Y Q ++ +K LPGPYTFIL + +PK + +K
Sbjct: 76 ISDYIR-------QIDTPTYKILKKALPGPYTFILPGNNNLPK----------VFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGL-DFVVDG 189
VG+R+P++ I + I+Q++ P++STS+ + +D+ E+ DP +I + + E L D VVDG
Sbjct: 119 VGIRVPDNNIARTIVQELGNPIVSTSI-YDEDDIIEYTTDPELILEKW--ENLVDAVVDG 175
Query: 190 GVRVAEPSTVVDMTGTYPKIIRQGKG 215
G ST++D++G P++IR+GKG
Sbjct: 176 GYGDNVASTIIDLSGYEPEVIREGKG 201
>gi|317052438|ref|YP_004113554.1| Sua5/YciO/YrdC/YwlC family protein [Desulfurispirillum indicum S5]
gi|316947522|gb|ADU66998.1| Sua5/YciO/YrdC/YwlC family protein [Desulfurispirillum indicum S5]
Length = 202
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P+ DS ++ VE+++ G + PTD+ Y I CD+ + AI R+RRIK + +KPL+ +
Sbjct: 8 PNNIDSRQIAAAVEIMRNGGLVAYPTDSAYGIGCDILNKDAIARVRRIKQMHDAKPLTFI 67
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL Y +R +KH +PGPYTF+L A+K PK +
Sbjct: 68 CSSLSHASQYAIISDYA--------YRTMKHLIPGPYTFLLDATKLTPK--------AVQ 111
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG-LDF 185
RK G+RIP + IC A+++++ P+IST+ K D E DP I EG LD
Sbjct: 112 NPKRKRCGIRIPANDICMALVEELGRPIISTTAKV--DGEPTGDPWRIHQEL--EGMLDA 167
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+VDGG +TV+ +++RQG G
Sbjct: 168 LVDGGYSEPTQTTVLLFENNQVELVRQGMG 197
>gi|170078316|ref|YP_001734954.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7002]
gi|169885985|gb|ACA99698.1| Sua5/YciO/YrdC/YwlC family protein [Synechococcus sp. PCC 7002]
Length = 223
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 30/223 (13%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P LE + + L+ GAV + PTDT+YAI CDL + A++++R++K + K
Sbjct: 4 YYSLHPKNPQQRDLEAIAQQLRAGAVMLYPTDTVYAIGCDLTAKQAVQKVRQLKRLANDK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL +I Y +R +K +PGPYTF+L A+K+VPK +
Sbjct: 64 PLTFLCSSLSNISEYAL--------VSDEAYRIMKRAIPGPYTFLLPATKQVPKLVMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE-----WMVDPVVIAD 176
R+ G+R+P+ AICQ +LQ + P+ISTS L D + ++ + D
Sbjct: 114 ------PKRRSTGIRVPDHAICQGLLQALGNPIISTSAH-LPDEDGEPFTLGLEKARLFD 166
Query: 177 TYGPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
P +D ++D +EP ST++D P +IR+G G
Sbjct: 167 ALEPL-VDIIIDSD---SEPGTKTSTILDFCDRQPTLIRKGLG 205
>gi|404449980|ref|ZP_11014967.1| Sua5/YciO/YrdC/YwlC family protein [Indibacter alkaliphilus LW1]
gi|403764459|gb|EJZ25360.1| Sua5/YciO/YrdC/YwlC family protein [Indibacter alkaliphilus LW1]
Length = 209
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 123/216 (56%), Gaps = 19/216 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + K+E +V +L++G + + PTDT+Y + C++ + AIER+ IK ++P K
Sbjct: 5 FIKLYPENPEIKKIEKIVSVLRDGGIIIYPTDTVYGLGCNIHNLRAIERIALIKGIKPKK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I YT +F+ +K LPGPYTFIL A+ VPK
Sbjct: 65 HNFSFICYDLSNISEYTRAL-------STPVFKVMKKALPGPYTFILEANNSVPKIL--- 114
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYG 179
S +K VG+R+P+ +I + +++++ +P+++TS+ + E+ DP +I + Y
Sbjct: 115 ------NSNKKTVGIRVPDHSIPRLLVKELGSPILTTSIHDEDEVVEYSTDPELIYEKYR 168
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STV+D TG +++R+G G
Sbjct: 169 -DLVDVVIDGGYGNNVASTVLDCTGQQIEVVREGLG 203
>gi|404493183|ref|YP_006717289.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Pelobacter
carbinolicus DSM 2380]
gi|77545247|gb|ABA88809.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Pelobacter
carbinolicus DSM 2380]
Length = 204
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 20/223 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + +P + VVE +K+G + PTDT+Y + CD+ + I+R+ +IK
Sbjct: 1 MILTINPETPQKRLISRVVECIKQGGIVAYPTDTIYGLGCDIFNRKGIKRIYQIKERVHR 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L D+ Y Q F+ +K LPGPYTF+L A++ VP V
Sbjct: 61 KPFSFICADLSDVANY--------AQVSNFAFKIMKRYLPGPYTFVLEATRVVPDLLV-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+RIP++ I AI++++ PL++TS L E DP +I + G
Sbjct: 111 -------TKQKTVGIRIPSNPISLAIVRELGHPLVTTSAN-LSGEEPCCDPSLIEEELGK 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+ ++ VVDGG+ E STV+ + +++RQG G + W+ +
Sbjct: 163 Q-INMVVDGGIIKGEASTVISLIDDNIEVLRQGAG-DISWIHQ 203
>gi|253688396|ref|YP_003017586.1| Sua5/YciO/YrdC/YwlC family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754974|gb|ACT13050.1| Sua5/YciO/YrdC/YwlC family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 206
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 21/199 (10%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
H + FR +K+ PG YTFIL A+KEVP++ + RK +G+R
Sbjct: 79 --------AHVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEP 196
+P++ I +L ++ PL+ST++ ++ DP I + G + +D ++ GG +P
Sbjct: 123 VPSNPIALELLAALNEPLMSTTLMLPGNDFAESDPEEIQEILGKQ-VDLIIHGGSLGQQP 181
Query: 197 STVVDMTGTYPKIIRQGKG 215
+TV+D+T + P++ R+G G
Sbjct: 182 TTVIDLTESAPRVAREGTG 200
>gi|344942241|ref|ZP_08781529.1| Sua5/YciO/YrdC/YwlC family protein [Methylobacter tundripaludum
SV96]
gi|344263433|gb|EGW23704.1| Sua5/YciO/YrdC/YwlC family protein [Methylobacter tundripaludum
SV96]
Length = 207
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + V+++++G V V PTD+ YAI C + A++++RRI+ ++
Sbjct: 4 FFEIHPESPQLRLIHRAVDIIRKGGVIVYPTDSSYAIACQIGDKQALDKIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L + +T + + +R +K PG +TFIL A++EVP++
Sbjct: 64 NFTLVCKDLTQVSMFT--------KISNDAYRLIKALTPGAFTFILEATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K VG+R+P+ + Q ++Q++ PL S+++ ++E + DP I + E
Sbjct: 112 ----QHPKKKTVGIRVPDHPVAQLLVQELGEPLFSSTLMLPGEDEALTDPYEIRNKLEHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++D G+ E +T+++ + + +IIRQGKG
Sbjct: 168 -LDLIIDAGIIEFEQTTIIEFSSSGVEIIRQGKG 200
>gi|183599267|ref|ZP_02960760.1| hypothetical protein PROSTU_02728 [Providencia stuartii ATCC 25827]
gi|386741517|ref|YP_006214696.1| hypothetical protein S70_00510 [Providencia stuartii MRSN 2154]
gi|188021499|gb|EDU59539.1| Sua5/YciO/YrdC/YwlC family protein [Providencia stuartii ATCC
25827]
gi|384478210|gb|AFH92005.1| hypothetical protein S70_00510 [Providencia stuartii MRSN 2154]
Length = 206
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L +G V V PTD+ YAI C L+ A++R+ RI+ ++ + +++
Sbjct: 9 PDNPQARLINQSVEILNKGGVIVYPTDSGYAIGCRLEEKEALQRICRIRQLDANHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y FR +K+ PG YTFIL +KEVP++ +
Sbjct: 69 CRDLSELSNY--------AHVDNTAFRLIKNNTPGNYTFILRGTKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L+ + PL+STS+ D+ DP I D G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIARDLLEAVGEPLMSTSLIMPGDDFTQSDPEEIRDLLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D T P ++R G G
Sbjct: 172 IHGGYIGQKPTTVIDFTDDSPVVVRVGTG 200
>gi|24212721|ref|NP_710202.1| translation factor Sua5 [Leptospira interrogans serovar Lai str.
56601]
gi|45655934|ref|YP_000020.1| hypothetical protein LIC10020 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386072508|ref|YP_005986825.1| putative translation factor Sua5 [Leptospira interrogans serovar
Lai str. IPAV]
gi|417761371|ref|ZP_12409383.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000624]
gi|417767196|ref|ZP_12415141.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417770163|ref|ZP_12418073.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|417776532|ref|ZP_12424368.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000621]
gi|417785017|ref|ZP_12432722.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
C10069]
gi|418669896|ref|ZP_13231270.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418672477|ref|ZP_13233816.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000623]
gi|418684196|ref|ZP_13245385.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418689493|ref|ZP_13250615.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
FPW2026]
gi|418699897|ref|ZP_13260846.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418705105|ref|ZP_13265970.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418707753|ref|ZP_13268573.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418713461|ref|ZP_13274188.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 08452]
gi|418724723|ref|ZP_13283532.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 12621]
gi|418730984|ref|ZP_13289460.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 12758]
gi|421087508|ref|ZP_15548344.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
HAI1594]
gi|421104407|ref|ZP_15565002.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421117383|ref|ZP_15577746.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421123334|ref|ZP_15583616.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
Brem 329]
gi|421124905|ref|ZP_15585162.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421135201|ref|ZP_15595326.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|24193354|gb|AAN47220.1| putative translation factor Sua5 [Leptospira interrogans serovar
Lai str. 56601]
gi|45599167|gb|AAS68657.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456297|gb|AER00842.1| putative translation factor Sua5 [Leptospira interrogans serovar
Lai str. IPAV]
gi|400324159|gb|EJO76459.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400350315|gb|EJP02579.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400361638|gb|EJP17604.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
FPW2026]
gi|409942785|gb|EKN88390.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000624]
gi|409947717|gb|EKN97711.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|409951806|gb|EKO06320.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
C10069]
gi|409962044|gb|EKO25786.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 12621]
gi|410011094|gb|EKO69222.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410020619|gb|EKO87419.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410344078|gb|EKO95273.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
Brem 329]
gi|410365859|gb|EKP21252.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410429757|gb|EKP74132.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira santarosai str.
HAI1594]
gi|410438036|gb|EKP87135.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410573674|gb|EKQ36720.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000621]
gi|410580605|gb|EKQ48427.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
2002000623]
gi|410754186|gb|EKR15841.1| Sua5/YciO/YrdC/YwlC family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410761018|gb|EKR27207.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410764956|gb|EKR35658.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410772174|gb|EKR47368.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410774546|gb|EKR54554.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 12758]
gi|410790544|gb|EKR84238.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans str.
UI 08452]
gi|455668936|gb|EMF34108.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455790096|gb|EMF41986.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456823769|gb|EMF72206.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456986945|gb|EMG22389.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 202
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 17/208 (8%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSL 70
+ KL+ + + L +G + + PTDT+YA++ D +S +E+L +KN+ ++PLS++C S+
Sbjct: 11 EKRKLQQISDQLSQGKIYIFPTDTVYALLADSQSKLGVEKLYELKNISKNQPLSLICPSI 70
Query: 71 RDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLR 130
Y + FR +K PGP+TFI +A+K +P R + K
Sbjct: 71 SIASNYIEHLSN-------DAFRLMKKITPGPFTFITSANKHLP----RVSFSNQK---E 116
Query: 131 KHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGG 190
K +G+RIP+ Q +++ PL STSV ++E++++ + YG ++ +VDGG
Sbjct: 117 KQIGIRIPDAIYLQELMKIHPNPLTSTSV--FANDEFIIEVDSLEKIYGSR-VEGIVDGG 173
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+ E ST++D+TG IIR+GKG +L
Sbjct: 174 ILKVELSTILDLTGDEITIIREGKGFEL 201
>gi|443473667|ref|ZP_21063690.1| YciO family [Pseudomonas pseudoalcaligenes KF707]
gi|442904477|gb|ELS29519.1| YciO family [Pseudomonas pseudoalcaligenes KF707]
Length = 209
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE+LK G V V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 4 FFQVHPDNPQPRLIRQAVEILKSGGVVVYPTDSSYALGCLIGDKTAVERIRRLRRLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I + + FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSEIGVF--------AKVDTAAFRLIKAHTPGPYTFILNATREVPRMLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+RIP + + A+L+++ APL+STS+ + M DP + +
Sbjct: 113 -----HPKRRTIGIRIPANPVALALLEQLGAPLMSTSLILPGEELPMSDPYEMRQILEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG STV+ + P++IR+G G
Sbjct: 168 -VDLIIDGGFGGMAASTVISLADGEPEVIREGCG 200
>gi|337278662|ref|YP_004618133.1| hypothetical protein Rta_10290 [Ramlibacter tataouinensis TTB310]
gi|334729738|gb|AEG92114.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 213
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 113/218 (51%), Gaps = 21/218 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL G + VPTD+ YA+ C L +A +RLR+I+ V+
Sbjct: 4 YFEVHPDNPQQRLLKQAAALLSSGGIVAVPTDSSYALACHLDDKAAADRLRQIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ +Y R D + FR +K PGPYTFIL A++EVP++
Sbjct: 64 HLTLLCRDLAELASYA----RVDNRA----FRLLKSGTPGPYTFILEATREVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ Q +L APL++T++ + M D I +
Sbjct: 112 ----SHPQRKTIGLRVPDHRALQELLALHGAPLLATTLIPPGETLPMNDAAAIRARF-ER 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
L VVD G EP+TV+D+T G P ++RQG+G
Sbjct: 167 VLAAVVDAGACPLEPTTVLDLTPMGQGGEPVLVRQGRG 204
>gi|154489839|ref|ZP_02030100.1| hypothetical protein PARMER_00068 [Parabacteroides merdae ATCC
43184]
gi|218258263|ref|ZP_03474665.1| hypothetical protein PRABACTJOHN_00320 [Parabacteroides johnsonii
DSM 18315]
gi|423346272|ref|ZP_17323960.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides merdae
CL03T12C32]
gi|423722862|ref|ZP_17697015.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides merdae
CL09T00C40]
gi|154089281|gb|EDN88325.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides merdae ATCC
43184]
gi|218225606|gb|EEC98256.1| hypothetical protein PRABACTJOHN_00320 [Parabacteroides johnsonii
DSM 18315]
gi|409221070|gb|EKN14023.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides merdae
CL03T12C32]
gi|409242135|gb|EKN34900.1| Sua5/YciO/YrdC/YwlC family protein [Parabacteroides merdae
CL09T00C40]
Length = 202
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 25/223 (11%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M V+ P + +++ VV ++++G + + PTDT+YAI CD + A+E++ ++K V P
Sbjct: 1 MLVKIYPENPNLREIDKVVNIMRDGGLVIYPTDTVYAIGCDALNVRAVEKICQLKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L ++ Y + F+ +K LPG +TFIL S E+PK
Sbjct: 61 KSNLSIICYDLSNLSEY--------AKVSNAAFKLMKKNLPGAFTFILPTSSELPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADT 177
Y RK VG+R+P++ I + +++++ P+++ S+ KD E+ DP +I +
Sbjct: 109 ------IYKNRKEVGIRVPDNNIIRTLVRELGNPILTMSLHD-KDEIIEYSTDPELIEEK 161
Query: 178 YGPEGL-DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLY 219
Y E L D V+DGG E STV++ T +IIRQGKG +Y
Sbjct: 162 Y--ENLVDIVIDGGYGGTEASTVINCTTDDFEIIRQGKGELIY 202
>gi|428224056|ref|YP_007108153.1| translation factor SUA5 [Geitlerinema sp. PCC 7407]
gi|427983957|gb|AFY65101.1| translation factor SUA5 [Geitlerinema sp. PCC 7407]
Length = 225
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 36/224 (16%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S ++E + + L++GAV + PTDT+YAI CDL SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQSRRIEQIRDALRDGAVMLYPTDTVYAIGCDLNVKSAVERVRQIKRLSNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C S ++ Y + +R ++ +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSPSNVAQY--------AWVQDSAYRLMRRLVPGPYTFLLPATKAVPRLVME------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP------ 180
RK G+R+P+ +C A+L + P+ISTS +L +E P+ I++ G
Sbjct: 114 -PKRKTTGIRVPDHPVCNALLAALGNPIISTSA-YLPMDEGEA-PIFISEGRGEISQAEL 170
Query: 181 ----EGL-DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+GL D +VD G +EP ST++D+TG P ++R+G G
Sbjct: 171 FDRLDGLVDVIVDDG---SEPGLVVSTILDLTGEEPVVVRRGLG 211
>gi|332140784|ref|YP_004426522.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410861106|ref|YP_006976340.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii AltDE1]
gi|327550806|gb|AEA97524.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410818368|gb|AFV84985.1| Sua5/YciO/YrdC/YwlC family protein [Alteromonas macleodii AltDE1]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + EL+++GAV V PTD+ YAI C ++ A+E+L RI+ ++
Sbjct: 4 FFYVHPDNPQKRLISQACELIRDGAVVVYPTDSGYAIGCQMEDKKALEQLCRIRQIDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + ++ Y + FR +K+ PG YTF+L A++EVPK+
Sbjct: 64 NFTLMCRDMSELSIY--------AKVDNTAFRQIKNNTPGHYTFVLKATREVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ PL+STS+ + DP VI D +
Sbjct: 112 ----QNPKRKTIGIRVPDNAIALALLEELGEPLMSTSLILPGNTMAESDPDVIRDNLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ ++ GG P+TV+D++ P I+R G G
Sbjct: 168 -VGLIIHGGYIGEHPTTVIDLSDDTPVIMRHGTG 200
>gi|77457715|ref|YP_347220.1| translation factor SUA5 [Pseudomonas fluorescens Pf0-1]
gi|77381718|gb|ABA73231.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 209
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YAI C + +AIER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSSYAIGCQIGDKNAIERVRRLRQLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGNY--------AKIDTATFRILKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P++IR G G +M E
Sbjct: 168 -VDLIIDGGSGGIKASTVIDLTGDDPEVIRVGCGDPAPFMVE 208
>gi|119509689|ref|ZP_01628835.1| hypothetical protein N9414_21841 [Nodularia spumigena CCY9414]
gi|119465708|gb|EAW46599.1| hypothetical protein N9414_21841 [Nodularia spumigena CCY9414]
Length = 216
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 118/217 (54%), Gaps = 25/217 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++E + L GAV + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQTRRIEEIKSALSSGAVMLYPTDTVYAIGCDLNAKSAVERVRQIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PG YTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDTA------YRIMKRLIPGSYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM---VDP----VVIADTYG 179
RK G+R+P+ +C A+L ++ P+ISTS D+E + ++P V + D
Sbjct: 113 SPKRKTTGIRVPDHPVCLALLAALENPIISTSAHLPPDDEPVELDLEPRLSRVELFDRLD 172
Query: 180 PEGLDFVVDGGVRVA-EPSTVVDMTGTYPKIIRQGKG 215
+D ++D G E ST++D+TG P I R+G G
Sbjct: 173 -NLVDVIIDTGEETTYEVSTILDLTGDEPMITRRGLG 208
>gi|388567631|ref|ZP_10154061.1| Sua5/YciO/YrdC/YwlC family protein [Hydrogenophaga sp. PBC]
gi|388264960|gb|EIK90520.1| Sua5/YciO/YrdC/YwlC family protein [Hydrogenophaga sp. PBC]
Length = 211
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P L+ LL+ G V VPTD+ YA+ C L +A +RLRRI+ V+ L++L
Sbjct: 9 PDNPQPRLLKQAATLLQRGGVIAVPTDSSYALACHLDDKAAADRLRRIRQVDDKHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y R +R +K PGPYTFIL ASKEVP++
Sbjct: 69 CRDLSELASYAKVDNRQ--------YRLLKLATPGPYTFILEASKEVPRRV--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P + +L++ L++T++ + DP I + E +D V
Sbjct: 113 HPSRKTIGLRVPEHRALRELLEQHGGALLATTLILPGHEHPLNDPEAIRERLQHE-VDGV 171
Query: 187 VDGGVRVAEPSTVVDM----TGTYPKIIRQGKG 215
+D G EP+TV+D+ TG P+++RQG+G
Sbjct: 172 IDAGACALEPTTVLDLVPMGTGGDPEVVRQGQG 204
>gi|365874824|ref|ZP_09414356.1| Sua5 YciO YrdC YwlC family protein [Elizabethkingia anophelis Ag1]
gi|442588947|ref|ZP_21007756.1| Sua5A [Elizabethkingia anophelis R26]
gi|365757597|gb|EHM99504.1| Sua5 YciO YrdC YwlC family protein [Elizabethkingia anophelis Ag1]
gi|442561185|gb|ELR78411.1| Sua5A [Elizabethkingia anophelis R26]
Length = 205
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSI 65
P ++ VV+ L G + + P+DT+YA+ C++ A+E+L +IK V+ K SI
Sbjct: 9 PENPQENLIQEVVKTLDNGGLIIYPSDTVYALGCNIFDIKAMEKLAQIKGVKLEKAHFSI 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L + +T FR +KH LPGP+TFIL A+K +P
Sbjct: 69 ICNDLSHLSEFTRPIDTA-------TFRLLKHYLPGPFTFILEANKTLP----------L 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLD 184
Y +K +G+R+P+ I Q I+ K+ P+ STS+K D E+ DP +IA+ Y +D
Sbjct: 112 AYKGQKTIGIRVPDHPIPQLIVSKLGHPIASTSIKDDDDVIEYTTDPELIAEKYN-HLVD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+D G + ST+VD+T P+++R+GKG
Sbjct: 171 IVIDSGYGDNKASTIVDLTQGIPEVVREGKG 201
>gi|307130977|ref|YP_003882993.1| RNA-binding protein [Dickeya dadantii 3937]
gi|306528506|gb|ADM98436.1| predicted RNA-binding protein [Dickeya dadantii 3937]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L +G V V PTD+ YA+ C L+ +A+ER+ RI++++ + +++
Sbjct: 9 PQNPQPRLINQTVEILHKGGVIVYPTDSGYALGCMLEDKAAMERICRIRDLDQNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSSY--------AYVDNAAFRLMKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L ++ PL+ST++ ++ DP I + G + +D V
Sbjct: 114 -EKRKTIGMRVPSNPIALELLAALNEPLMSTTLMLPGNDFAESDPEEIQEQLG-KRVDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P ++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESVPVVVREGTG 200
>gi|163788700|ref|ZP_02183145.1| translation factor [Flavobacteriales bacterium ALC-1]
gi|159875937|gb|EDP69996.1| translation factor [Flavobacteriales bacterium ALC-1]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + ++ VV +LK G + + PTDT+Y + CD+ + A+ER+ IK V+ K
Sbjct: 4 FIKIYPENPNPKAIQNVVNVLKRGGLIIYPTDTVYGLGCDITNIKALERIAIIKGVKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPG YTFIL SK +P
Sbjct: 64 SNFSFVCEDLSNLSDYVK-------QIDTRTFKILKRALPGAYTFILPGSKNLPN----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
+ RK VG+R+P+++I A+++ + P++STS++ D E+ DP +I + +
Sbjct: 112 -----PFKKRKTVGIRVPDNSIALALVEALGNPIVSTSIRDEDDVIEYTTDPELILEKWD 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG E ST++D++ P I+R+GKG
Sbjct: 167 -DLVDLVIDGGYGGNEASTIIDLSEDDPIIVREGKG 201
>gi|92112840|ref|YP_572768.1| Sua5/YciO/YrdC/YwlC [Chromohalobacter salexigens DSM 3043]
gi|91795930|gb|ABE58069.1| Sua5/YciO/YrdC/YwlC [Chromohalobacter salexigens DSM 3043]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ + +L+ G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 FFQIHPDNPQKRLIDQTLTILRGGGVIAYPTDSGYALGCCLGDKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + +FR +K PGPYTFIL A+ EVP+ +
Sbjct: 64 NFTLMCSDLSEIGTY--------AKVDNAVFRLLKAHTPGPYTFILNATSEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L + PL+S ++ + ++ M DP VI D +G
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLDALGEPLMSVTLIPVGEDLPMTDPEVIRDRFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG +P+TVVD+ P I+R+G+G
Sbjct: 168 -LDAVIDGGACHLDPTTVVDVREIPPTIVREGRG 200
>gi|375011527|ref|YP_004988515.1| Sua5/YciO/YrdC/YwlC family protein [Owenweeksia hongkongensis DSM
17368]
gi|359347451|gb|AEV31870.1| Sua5/YciO/YrdC/YwlC family protein [Owenweeksia hongkongensis DSM
17368]
Length = 207
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 23/213 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSI 65
P + ++ V+++LK+G V + PTDT+Y+ CD+ A+E++ R+KN++ K SI
Sbjct: 9 PENPNPKAIQKVIDVLKKGGVIIYPTDTVYSFGCDITKSRALEQVARLKNIKIEKANFSI 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+ L + YT Q ++ + LPGPYTFIL AS +PK
Sbjct: 69 IFSDLSHLSEYTK-------QVDTPTYKLLNRALPGPYTFILDASNAIPKIF-------- 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---WMVDPVVIADTYGPEG 182
S +K +G+RIP++ I + I++ + P+I++SV ++E + DP +I + YG +
Sbjct: 114 -KSKKKTIGIRIPDNNIPREIVRALGNPIIASSVH--DEDEIINYTTDPELILEKYGKQ- 169
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG+ STV+D+T P++IR+GKG
Sbjct: 170 VDLIIDGGMGDNHDSTVIDLTLGSPEVIREGKG 202
>gi|241767937|ref|ZP_04765486.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax delafieldii 2AN]
gi|241360895|gb|EER57709.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax delafieldii 2AN]
Length = 203
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 17/202 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL++G V VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 4 YFEVHPDNPQPRLLKQAAALLQKGGVVAVPTDSSYALVCHLDDKDAVDRLRRIRQVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRRV---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ Q +L+ APL++T++ + + DP I + Y +
Sbjct: 112 ----SHPSRKTIGLRVPDRKGLQLLLELHGAPLLATTLIPAGETAPLNDPQEIRERYE-K 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT 203
+D +VD G EP+TV+D+T
Sbjct: 167 LVDAIVDAGACPLEPTTVIDLT 188
>gi|162457645|ref|YP_001620012.1| translation factor [Sorangium cellulosum So ce56]
gi|161168227|emb|CAN99532.1| Putative translation factor [Sorangium cellulosum So ce56]
Length = 201
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +P + K+ ++L+++G V PTDT+Y CDL + +AIER+ +IK + +
Sbjct: 1 MLQPINPDHPEPRKIARAIDLIQKGEVIGYPTDTVYGFGCDLMNKAAIERVYQIKGMRQN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
K L+ +C L DI Y +R +K LPGPYTFIL A++EVPK
Sbjct: 61 KNLAFICPDLSDIARYAI--------VENQTYRILKRYLPGPYTFILPATREVPKYV--- 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+R+PN + A+++ + PLIST+ ++ ++DP I D +
Sbjct: 110 ------HLKQKTVGIRVPNHPVALALVRALGRPLISTTAAPPGEDP-IIDPGEIDDRF-- 160
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGP 216
GL V+D G + P+TV+D++ +I+R+G GP
Sbjct: 161 PGLALVLDAGTGGSVPTTVIDLSQGEVQIVREGAGP 196
>gi|163857789|ref|YP_001632087.1| translation factor [Bordetella petrii DSM 12804]
gi|163261517|emb|CAP43819.1| putative translation factor [Bordetella petrii]
Length = 207
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
++ P L+ + L +G + VPTD+ YA+ L +A + LRR++ ++
Sbjct: 3 LFFSIHPDNPQPRLLKQAAQWLNDGGLVAVPTDSSYAVAAHLDDKAAADALRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A++EVP++
Sbjct: 63 HHLTLLCRDLAEI----GHFARVDNRQ----YRLLKAATPGPWTFILEATREVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P A+ A+L+++ APL+ST++ +++ + D I D Y
Sbjct: 112 -----SHPSRKTIGIRVPQHAVTLALLEQVGAPLLSTTLIPKGEDDALNDAEDIRDRYAH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G P+TV+D+TG P ++R+G+G
Sbjct: 167 D-LAAIIDAGACPQSPTTVIDLTGDEPAVLRRGRG 200
>gi|116329499|ref|YP_799219.1| Sua5 family translation factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116122243|gb|ABJ80286.1| Translation factor, SUA5 family [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 202
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILFLHPINPENRKLQQISTKLLEGGVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKKITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q++L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQSLLKIHPNPLTSTSV--FANDEFIIEVDLLEQIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MT IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKMELSTILNMTNDEMTIIREGKG 198
>gi|418721172|ref|ZP_13280356.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. UI 09149]
gi|418735577|ref|ZP_13291987.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421095726|ref|ZP_15556439.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. 200801926]
gi|410362436|gb|EKP13476.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. 200801926]
gi|410742239|gb|EKQ90988.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. UI 09149]
gi|410748711|gb|EKR01605.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|456887442|gb|EMF98488.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira borgpetersenii
str. 200701203]
Length = 202
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG V + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILFLHPINPENRKLQQISTKLLEGGVYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKKITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q++L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQSLLKIHPNPLTSTSV--FANDEFIIEVDLLEQIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MT IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKVELSTILNMTNDEMTIIREGKG 198
>gi|253998631|ref|YP_003050694.1| Sua5/YciO/YrdC/YwlC family protein [Methylovorus glucosetrophus
SIP3-4]
gi|253985310|gb|ACT50167.1| Sua5/YciO/YrdC/YwlC family protein [Methylovorus glucosetrophus
SIP3-4]
Length = 209
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + VE+L+ G V PTD+ YA+ C + + A +R+R I+ V+
Sbjct: 4 YFVLHPQNPQPRLIAQAVEILRNGGVVAYPTDSSYALGCVVGNKDAQDRIRAIRGVDDDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR+L ++ Y Q + FR +K PG YTFIL A++EVP++
Sbjct: 64 LFTLVCRNLSELAVY--------AQVDNSQFRLLKANTPGQYTFILKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ R +G+R+P+ A+ QA+L+ +D PL+S S++ + + + + I D +
Sbjct: 112 ----QHPKRSTLGLRVPDHAVTQALLEALDEPLLSMSLQLPGEEDVLNEAWEIRDRLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G A P+TV+D+TG P ++R G G
Sbjct: 168 -LDLVIDAGACSATPTTVIDLTGDSPILVRAGAG 200
>gi|89891475|ref|ZP_01202980.1| translation factor, Sua5/YciO/YrdC/YwlC family [Flavobacteria
bacterium BBFL7]
gi|89516249|gb|EAS18911.1| translation factor, Sua5/YciO/YrdC/YwlC family [Flavobacteria
bacterium BBFL7]
Length = 205
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 118/204 (57%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+L+ + + +++GA+ + PTDT+Y + CD+ A+E++ +I+ V+ K S +C SL +
Sbjct: 16 ELQRIAKAMRDGALVIYPTDTVYGLGCDINHKGALEKVAKIRGVKLEKANFSFICESLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y + Q F+ +K LPGPYTFIL + +P + + +K
Sbjct: 76 LSEYVS-------QIDTATFKLLKRNLPGPYTFILPGNNNLP----------SVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P+++I ++Q + P+ISTS+K + E+ DP +I + + +D+V+DGG
Sbjct: 119 VGIRVPDNSIAIGLVQALGNPIISTSIKDEDEVIEYTTDPSLIVEKWD-NLVDYVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D+TG P ++R+GKG
Sbjct: 178 GDNIASTVIDLTGDEPVLVREGKG 201
>gi|448746516|ref|ZP_21728183.1| Sua5/YciO/YrdC/YwlC [Halomonas titanicae BH1]
gi|445565854|gb|ELY21962.1| Sua5/YciO/YrdC/YwlC [Halomonas titanicae BH1]
Length = 207
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ + ++++G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 YFQIHPENPQKRLIDQSIAIIRKGGVVAYPTDSGYALGCHLGEKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + ++FR +K PGPYT+IL A+ EVP+ +R
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNDVFRLLKAHTPGPYTYILDATSEVPRLLLR-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
R+ +GVR+P+ I A+L + PL+S ++ + D+ M DP I + +G
Sbjct: 114 ------PKRRSIGVRVPDHRITHALLAALGEPLMSVTLIPVGDDLPMNDPEEIRERFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG +P++V+D+ PKIIR+G+G
Sbjct: 168 -LDAIIDGGACHLDPTSVIDLRELPPKIIREGRG 200
>gi|145298417|ref|YP_001141258.1| hypothetical protein ASA_1410 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362367|ref|ZP_12963002.1| hypothetical protein IYQ_18671 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851189|gb|ABO89510.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686413|gb|EHI51015.1| hypothetical protein IYQ_18671 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++++ G V PTD+ YA+ C + A+ER+ RI+ ++P+ +++
Sbjct: 9 PENPQARLIGQAVQIIQNGGVIAYPTDSGYALGCQMGDKGALERICRIRRIDPTHDFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I TY + FR VK PGPYTFI A+KEVP++ +
Sbjct: 69 CRDLSEISTY--------AKVDNTAFRLVKGNTPGPYTFIFKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+P + I A+L+ + PL+ST++ DP I D G + LD V
Sbjct: 114 -EKKKTIGIRVPANNIALALLEALGEPLLSTTLILPGSEMAEFDPEEIFDKLGKQ-LDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+GG +P+TVVD + + R+G G
Sbjct: 172 VNGGYLGEQPTTVVDFSDDETVLRRRGAG 200
>gi|376007569|ref|ZP_09784763.1| putative translation factor, Sua5/YciO/YrdC/YwlC family
[Arthrospira sp. PCC 8005]
gi|375324036|emb|CCE20516.1| putative translation factor, Sua5/YciO/YrdC/YwlC family
[Arthrospira sp. PCC 8005]
Length = 222
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 29/223 (13%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P +E + + LK GAV + PTDT+YAI CDL SA++++R+IK + KPL
Sbjct: 6 EIHPHNPQKRTIEQIKDALKRGAVMLYPTDTVYAIGCDLTVKSAVQKVRQIKQISNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PG YTF+L A+K VPK +
Sbjct: 66 TFLCSSLSNIADYAIVTDAA--------YRTIKRLIPGSYTFVLPATKLVPKLVMS---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---------WMVDPVVI 174
RK G+R+P+ +C AIL+ + P+ISTS +++E D V +
Sbjct: 114 ----PKRKTTGIRVPDHPVCLAILESLGNPVISTSAHIKEEDEPSALIKKIPQEYDKVQL 169
Query: 175 ADTYGPEGL-DFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKG 215
D E L D +VD G + + ST++D++ P ++R+GKG
Sbjct: 170 FDAL--ENLVDIIVDDGADLDYQVSTIIDLSADDPVLVRRGKG 210
>gi|390943764|ref|YP_006407525.1| Sua5/YciO/YrdC/YwlC family protein [Belliella baltica DSM 15883]
gi|390417192|gb|AFL84770.1| Sua5/YciO/YrdC/YwlC family protein [Belliella baltica DSM 15883]
Length = 209
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 121/217 (55%), Gaps = 21/217 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P D K++ +VE+L+ G V + PTDT+Y + CD+ + A+ER+ +IK ++ K
Sbjct: 5 FIKLYPENPDPKKVQKIVEILRNGGVIIYPTDTVYGMGCDIHNQRAVERICQIKGIKAKK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I YT +F+ +K LPGP+TFIL A+ VPK
Sbjct: 65 HNFSFICYDLSNIAEYTRAL-------STPVFKMMKKALPGPFTFILEANNSVPK----- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
S +K +G+R+P+ I + +++++ P+++TS++ D E+ DP +I + Y
Sbjct: 113 ----ILNSNKKTIGIRVPDHTIPRLLVKELGQPILTTSIRDEDDVIEYSTDPELIFEKY- 167
Query: 180 PEGL-DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E L D V+DGG ST++D T +IIR+G G
Sbjct: 168 -ENLVDVVIDGGYGNNVGSTILDCTNDEIEIIREGLG 203
>gi|294778304|ref|ZP_06743730.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides vulgatus PC510]
gi|294447932|gb|EFG16506.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides vulgatus PC510]
Length = 204
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
LE V+ +L+EG + + PTDT+YAI C AIER+ ++KN++P K LSI+C L +I
Sbjct: 15 LEEVIRVLEEGGLIIYPTDTMYAIGCHGLKERAIERICKLKNIDPRKNNLSIICYDLSNI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + + F+ +K LPGP+TFIL +PK + RK V
Sbjct: 75 SEY--------AKVDNSTFKLMKRNLPGPFTFILNTGNRLPK----------IFKNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTS--VKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I + I + AP+++T+ +K +D E++ P +I + +G E ++ ++DGG+
Sbjct: 117 GIRVPDNNIIREICHILKAPIMTTTLPLKDGEDIEYITTPELIEEKFGKE-VELIIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
EPST+V+ T +I+RQGKG
Sbjct: 176 GGIEPSTIVNCTNGEAEIVRQGKG 199
>gi|373951758|ref|ZP_09611718.1| Sua5/YciO/YrdC/YwlC family protein [Mucilaginibacter paludis DSM
18603]
gi|373888358|gb|EHQ24255.1| Sua5/YciO/YrdC/YwlC family protein [Mucilaginibacter paludis DSM
18603]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 21/218 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ P + ++ VV++LK G + + PTDT+Y + CD+ + AI+ + +I++++P
Sbjct: 1 MLIKIYPENPNEKSIDQVVQILKRGGLIIYPTDTVYGLGCDITNPKAIDAICKIRHIKPE 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K S +C L I Y +R +K LPGP+TFI A+ VPK
Sbjct: 61 KANFSFICYDLSHISDYIKPIDNA-------TYRVLKKALPGPFTFIFNANSHVPKLLS- 112
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
S +K VG+R+P++ I + I++ + P++S+S++ + E+ DP +I + Y
Sbjct: 113 --------SNKKTVGIRVPDNNIAREIVKALGNPILSSSIRDEDEIIEYSTDPELIHEKY 164
Query: 179 GPEGL-DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
EGL D V+DGG PSTVVD T +IIR+GKG
Sbjct: 165 --EGLVDLVIDGGYGDNVPSTVVDCTTGDFEIIREGKG 200
>gi|292492352|ref|YP_003527791.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus halophilus Nc4]
gi|291580947|gb|ADE15404.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus halophilus Nc4]
Length = 209
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P+ L V +L++ + V PTD+ YA+ C + + +A +R+R ++ +
Sbjct: 4 YFRIHPTHPQQRLLNQAVTILRQEGLIVYPTDSGYALGCQVGNKAAADRIRHLRGLGTRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S++ R L ++ Y + + FR +K PG YTFI A++EVP++
Sbjct: 64 EFSLVGRDLSELSLY--------ARVGNSAFRLLKALTPGAYTFIFKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+RIP+++I QA+L + PLIS+++ + + DP I D G +
Sbjct: 112 ----QDPKRRTIGIRIPDNSITQALLAALGEPLISSTLILPGEEMPLTDPEGIRDRIGSQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EP+TVVD+ PKIIR+GKG
Sbjct: 168 -VDLVIDGGYCGFEPTTVVDLVEDIPKIIREGKG 200
>gi|146311854|ref|YP_001176928.1| hypothetical protein Ent638_2202 [Enterobacter sp. 638]
gi|145318730|gb|ABP60877.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter sp. 638]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L +I TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSEISTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQMLLETLGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTEDAPEVIREGVG 200
>gi|33592648|ref|NP_880292.1| hypothetical protein BP1556 [Bordetella pertussis Tohama I]
gi|33596862|ref|NP_884505.1| hypothetical protein BPP2258 [Bordetella parapertussis 12822]
gi|384203951|ref|YP_005589690.1| hypothetical protein BPTD_1539 [Bordetella pertussis CS]
gi|408416574|ref|YP_006627281.1| hypothetical protein BN118_2767 [Bordetella pertussis 18323]
gi|410472115|ref|YP_006895396.1| hypothetical protein BN117_1414 [Bordetella parapertussis Bpp5]
gi|33572294|emb|CAE41846.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33573563|emb|CAE37557.1| conserved hypothetical protein [Bordetella parapertussis]
gi|332382065|gb|AEE66912.1| hypothetical protein BPTD_1539 [Bordetella pertussis CS]
gi|401778744|emb|CCJ64192.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408442225|emb|CCJ48747.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P+ ++ + L +G + VPTD+ YA+V L +A + LRR++ ++ L++L
Sbjct: 9 PANPQPRLIKQAAQWLSDGGLVAVPTDSSYAVVAPLDDKAAADALRRLRGLDERHHLTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I R D + +R +K PGP+TFIL A++EVP++
Sbjct: 69 CRDLAEIGQVA----RVDNKQ----YRLLKAATPGPWTFILEATREVPRRV--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P A+ A+L+++ APL+ST++ + + + DP I + Y E L V
Sbjct: 113 HPSRKTIGIRVPAHAVALALLEQVGAPLLSTTLIPRDEEDALNDPEAIQERYQHE-LAAV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D G P+TVVD+TG P ++R+G G
Sbjct: 172 IDAGACPQTPTTVVDLTGAEPAVLRRGGG 200
>gi|170727252|ref|YP_001761278.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella woodyi ATCC 51908]
gi|169812599|gb|ACA87183.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella woodyi ATCC 51908]
Length = 213
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+ V +K G V V PTD+ YA+ C L A+ R+ RI+ ++ S++CR ++
Sbjct: 24 INQAVNAIKNGGVIVYPTDSGYALGCLLGEKDAMSRIARIRQIDNDHNFSLMCRDQSELS 83
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY + D Q +R +KH PGPYTFI ASKEVPK+ + +K +G
Sbjct: 84 TYA----KVDNQA----YRVLKHNTPGPYTFIFKASKEVPKRL--------QNPKKKTIG 127
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I A+L+ +D PL+STS+ + DP I D + +D ++ GG
Sbjct: 128 IRVPDNVIALALLEALDEPLMSTSLILPGEEFTESDPEHIRDILEHQ-VDVIIHGGYLGE 186
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+P+TV+D++ +IIR+G G
Sbjct: 187 KPTTVIDLSEGDIEIIREGAG 207
>gi|417850526|ref|ZP_12496422.1| hypothetical protein GEW_04094 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338220619|gb|EGP06084.1| hypothetical protein GEW_04094 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 18/210 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ +I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + FR +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSL--------VNNMAFRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWL-KDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++S S+ L ++N DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALALLSTLGEPILSCSLMLLGEENVTQSDPEEIRDRLEKQ-VDL 171
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG AEP+TVVD+T P IIR+G G
Sbjct: 172 IIHGGYLGAEPTTVVDLTNDTPIIIREGSG 201
>gi|116332436|ref|YP_802154.1| Sua5 family translation factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116126125|gb|ABJ77396.1| Translation factor, SUA5 family [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 202
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P ++ KL+ + L EG + + PTDT+YA+V D +S +E+L +KN+ +
Sbjct: 1 MILFLHPINPENRKLQQISTKLLEGGIYIFPTDTVYALVADSQSKLGVEKLYELKNIPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+PLS++C S+ Y FR +K PGP+TFI A+K +P R
Sbjct: 61 QPLSLICPSISVASNYIEYLSN-------EAFRLMKKITPGPFTFITRANKHLP----RV 109
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ K K +G+RIP+ Q++L+ PL STSV ++E++++ ++ YG
Sbjct: 110 SFSNQK---EKQIGIRIPDAIYLQSLLKIHPNPLTSTSV--FANDEFIIEVDLLEQIYGA 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +VDGG+ E ST+++MT IIR+GKG
Sbjct: 165 R-VEGIVDGGIVKMELSTILNMTNDEMTIIREGKG 198
>gi|388547808|ref|ZP_10151068.1| Sua5 family protein [Pseudomonas sp. M47T1]
gi|388274097|gb|EIK93699.1| Sua5 family protein [Pseudomonas sp. M47T1]
Length = 209
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P S ++ VE++++G V + PTD+ YA+ C + AIER+RR++ ++
Sbjct: 4 FFQIHPENPQSRLIKQAVEIIRKGGVVIYPTDSSYAMGCQIGDKGAIERVRRLRKLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L + + + FR +K +PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLICRDLSQLGLFA--------KIDTGAFRLLKAHVPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+PN I A+L+++ PL+S S+ + M DP + +
Sbjct: 113 -----HDKRRTIGLRVPNHPISHALLEELGEPLMSVSLIMPGETLPMTDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGVSASTVINLADGEPQVVRVGCGDPSPFMAE 208
>gi|406040202|ref|ZP_11047557.1| hypothetical protein AursD1_10343 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 205
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVERIRAGEVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAITTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP + ICQA+LQ++ P++++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPTNPICQALLQELGEPILTSTLILPGQEDPLDDPYDIENQLS- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+++RQG G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGDHPEVVRQGAG 199
>gi|427725280|ref|YP_007072557.1| translation factor SUA5 [Leptolyngbya sp. PCC 7376]
gi|427357000|gb|AFY39723.1| translation factor SUA5 [Leptolyngbya sp. PCC 7376]
Length = 225
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 26/223 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P LE + + L+ GAV + PTDT+YAI CDL + A++++R+IK + KPL+ L
Sbjct: 9 PKNPQQRDLEAIAKQLRSGAVMLYPTDTVYAIGCDLTAKQAVQKVRKIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL +I Y +R +K +PGPYTF+L A+K+VPK +
Sbjct: 69 CSSLSNISEYALVSDEA--------YRIMKRVIPGPYTFLLPATKQVPKLVLS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ G+R+P+ AI Q +L+ + P+ISTS + D + + + + + LD +
Sbjct: 114 -PKRRTSGIRVPDQAISQGLLEALGNPIISTSAH-IPDEDGELFTLGLEKARLFDALDSL 171
Query: 187 VDGGVRVA-EP----STVVDMTGTYPKIIRQGKGPKLYWMEEE 224
VD + EP ST++D T P +IR+G G W E E
Sbjct: 172 VDIIIDTEDEPGFKVSTILDFTSNQPALIRRGLG----WEELE 210
>gi|359393850|ref|ZP_09186903.1| hypothetical protein KUC_0489 [Halomonas boliviensis LC1]
gi|357971097|gb|EHJ93542.1| hypothetical protein KUC_0489 [Halomonas boliviensis LC1]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ + ++++G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 YFQIHPENPQKRLIDQAIAIIRKGGVVAYPTDSGYALGCHLGEKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + ++FR +K PGPYT+IL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNDVFRLLKAHTPGPYTYILDATSEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L + PL+S ++ + D+ M DP I + +G
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLAALGEPLMSVTLIPVGDDLPMNDPEEIRERFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG +P++V+D+ PKIIR+G+G
Sbjct: 168 -LDAIIDGGACHLDPTSVIDLRELPPKIIREGRG 200
>gi|404378215|ref|ZP_10983312.1| Sua5/YciO/YrdC/YwlC family protein [Simonsiella muelleri ATCC
29453]
gi|294484085|gb|EFG31768.1| Sua5/YciO/YrdC/YwlC family protein [Simonsiella muelleri ATCC
29453]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 117/214 (54%), Gaps = 18/214 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++ P ++ VE + +G V + PTD+ YA+ C L +A+ER+ I+ +
Sbjct: 4 FLTIHPDNPQDRLIKQAVETINKGGVVIYPTDSCYALGCRLGDKAAMERILAIRQMNLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HFTLMCADLSELGTY--------AKVDNSQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L+++ P++S ++ +DNE + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNQIALALLKELGEPMLSCTLILPEDNEPLTDPYEIRDRLD-Y 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TV+DMT +++RQG+G
Sbjct: 167 AVDLIIDGGWCGTEPTTVIDMTDGV-ELVRQGRG 199
>gi|260598146|ref|YP_003210717.1| hypothetical protein CTU_23540 [Cronobacter turicensis z3032]
gi|429093108|ref|ZP_19155714.1| YciO family [Cronobacter dublinensis 1210]
gi|429096604|ref|ZP_19158710.1| YciO family [Cronobacter dublinensis 582]
gi|429100781|ref|ZP_19162755.1| YciO family [Cronobacter turicensis 564]
gi|260217323|emb|CBA31309.1| Uncharacterized protein yciO [Cronobacter turicensis z3032]
gi|426282944|emb|CCJ84823.1| YciO family [Cronobacter dublinensis 582]
gi|426287430|emb|CCJ88868.1| YciO family [Cronobacter turicensis 564]
gi|426742156|emb|CCJ81827.1| YciO family [Cronobacter dublinensis 1210]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE++++G V V PTD+ YA+ C L+ A+ER+ RI+++ +++
Sbjct: 9 PDNPQPRLIKQAVEIVRKGGVIVYPTDSGYALGCKLEDKGAMERICRIRDLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ +D P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALDEPMLSTSLMLPGSDFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTDDAPVVLREGVG 200
>gi|149928539|ref|ZP_01916768.1| Sua5/YciO/YrdC/YwlC family protein [Limnobacter sp. MED105]
gi|149822738|gb|EDM81996.1| Sua5/YciO/YrdC/YwlC family protein [Limnobacter sp. MED105]
Length = 218
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S + +L+ G + +PTD+ YA+VC L +A+ERLRR+K + + L++L
Sbjct: 9 PQNPQSRLCKQAADLINSGGIAAIPTDSCYALVCHLDDKNAVERLRRLKGISEKQHLALL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C+ L ++ +Y + + +R +K PGPYTFIL A+KEVPK+
Sbjct: 69 CKDLSELGSY--------AKVNNVQYRLLKSVFPGPYTFILEATKEVPKR--------VS 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE-----WMVDPVVIADTYGPE 181
+ +K +G+R+P A+ Q +L+ ++ LI+T+++ E W V D
Sbjct: 113 HPSKKSIGLRVPAHAVVQGLLEHIEGALIATTLQLPGMEEPARSGWEAQEAVGND----- 167
Query: 182 GLDFVVDGGVRV-AEPSTVVDMTGTYPKIIRQGKGP 216
+D +VD G A P+TV+D T P ++R G GP
Sbjct: 168 -VDLIVDDGEYCGAFPTTVIDWTSEEPLVVRIGAGP 202
>gi|419954909|ref|ZP_14471043.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri TS44]
gi|387968296|gb|EIK52587.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri TS44]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + S IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRQGGVVVYPTDSSYAVGCSIGNKSGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGMF--------AKVDTAAFRLLKTHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L ++ PL+S S+ D M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLAELGEPLMSVSLILPGDELPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+D ++DGG E STVV + P+++R G G +M
Sbjct: 168 -VDLIIDGGYGGVEASTVVSLVDDQPQVLRVGCGDPAPFM 206
>gi|238899277|ref|YP_002924960.1| translation factor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229467038|gb|ACQ68812.1| putative translation factor, yrdC domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + ++LLK+G+V V PTD+ YA+ C L+ SA ER+ +I+
Sbjct: 4 FFHLHPKNPQIRLINQSIDLLKKGSVMVYPTDSGYALGCLLEKKSAQERICQIRERTSDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I Y + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCRDLSEIALY--------AYLDNSAFRLIKNNTPGRYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L ++ PL+ST++ D+ DP I G +
Sbjct: 114 ------EKRKTIGLRVPSNDIALALLDALNEPLMSTTLILPGDDFAQFDPEQIKQKLGKK 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +P+T++D+T P ++R G G
Sbjct: 168 -VDLIIDGGCIAEQPTTIIDLTDGNPVLVRSGGG 200
>gi|346642816|ref|YP_258724.2| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas protegens Pf-5]
gi|341579958|gb|AAY90895.2| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas protegens Pf-5]
Length = 209
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD+ YA+ C + AIER+RR++ ++
Sbjct: 4 FFQIHPENPQPRLIKQAVEIIRGGGVVIYPTDSSYAVACQMGDKGAIERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K +PGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KIDTGTFRLLKAHVPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I A+L ++ PL+S S+ D E + DP + +
Sbjct: 113 -----HPKRRTIGLRVPSNPIALALLAELGEPLMSVSLIMPGDTEALSDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG E STV+++ P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGSTESSTVINLADGEPEVIRVGCGDPAPFMAE 208
>gi|332161875|ref|YP_004298452.1| hypothetical protein YE105_C2253 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|418242709|ref|ZP_12869214.1| hypothetical protein IOK_15055 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549467|ref|ZP_20505511.1| YciO family [Yersinia enterocolitica IP 10393]
gi|325666105|gb|ADZ42749.1| hypothetical protein YE105_C2253 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860991|emb|CBX71264.1| uncharacterized protein yciO [Yersinia enterocolitica W22703]
gi|351777878|gb|EHB20066.1| hypothetical protein IOK_15055 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788602|emb|CCO68551.1| YciO family [Yersinia enterocolitica IP 10393]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 115/197 (58%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNPAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKEHLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR G G
Sbjct: 184 VIDLTDSSPEVIRVGAG 200
>gi|50121220|ref|YP_050387.1| hypothetical protein ECA2292 [Pectobacterium atrosepticum SCRI1043]
gi|49611746|emb|CAG75195.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 206
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 21/199 (10%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
H + FR +K+ PG YTFIL A+KEVP++ + RK +G+R
Sbjct: 79 --------AHVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEP 196
+P++ I +L ++ PL+ST++ ++ DP I + G + +D ++ GG +P
Sbjct: 123 VPSNPIALDLLAALNEPLMSTTLMLQGNDFAESDPEEIQERLG-KLVDLIIHGGSLGQQP 181
Query: 197 STVVDMTGTYPKIIRQGKG 215
+TV+D+T + P++ R+G G
Sbjct: 182 TTVIDLTESVPRVAREGTG 200
>gi|443244836|ref|YP_007378061.1| translation factor, Sua5/YciO/YrdC/YwlC family [Nonlabens
dokdonensis DSW-6]
gi|442802235|gb|AGC78040.1| translation factor, Sua5/YciO/YrdC/YwlC family [Nonlabens
dokdonensis DSW-6]
Length = 205
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 116/204 (56%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+L + + +K GA+ + PTDT+Y + CD+ + +A+E++ RIK V+ K S +C L +
Sbjct: 16 ELARIAKAMKNGALVIYPTDTVYGLGCDITNKTALEKVARIKGVKLEKANFSFICEDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y + Q +N F+ +K LPGPYTFIL + +P + +K
Sbjct: 76 LSDYVS-------QIDSNTFKILKRNLPGPYTFILPGNNNLP----------TVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+R+P++ I +++ + P+ISTS+K + E+ DP +I + + +D+V+D G
Sbjct: 119 VGIRVPDNKIATELVRLLGNPIISTSIKDEDEVIEYTTDPSLIVEKW-EHLVDYVIDAGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
ST++D+TG P +IR+GKG
Sbjct: 178 GGNVGSTIIDLTGDEPVLIREGKG 201
>gi|408675522|ref|YP_006875270.1| Sua5/YciO/YrdC/YwlC family protein [Emticicia oligotrophica DSM
17448]
gi|387857146|gb|AFK05243.1| Sua5/YciO/YrdC/YwlC family protein [Emticicia oligotrophica DSM
17448]
Length = 209
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 19/215 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVE-PSK 61
+E P D KL VVE LK G + + PTDT+Y++ CD+ + A+E+L +IK ++
Sbjct: 6 IELYPGNLDERKLIRVVECLKNGGIIIYPTDTVYSMGCDIFNTKAVEKLSKIKGIKLQHN 65
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
SI+C L +I TY + N FR +K LPGP+TFIL A+ ++PK
Sbjct: 66 NFSIVCHDLSNISTY--------AKVSNNTFRLLKRALPGPFTFILPATSDLPK------ 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVK-WLKDNEWMVDPVVIADTYGP 180
T K RK +G+RIP+ I I++ + P+I+TSVK + D + + + + +
Sbjct: 112 TLQTK---RKTIGIRIPDHEIPLKIIEMLGNPIITTSVKDDIDDIQEYPNEIEVIYSQNA 168
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++DGG EPSTVV ++IR+G G
Sbjct: 169 DKVDMIIDGGWCGLEPSTVVLAVDDDFEVIREGVG 203
>gi|429744019|ref|ZP_19277541.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. oral taxon 020
str. F0370]
gi|429163990|gb|EKY06162.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria sp. oral taxon 020
str. F0370]
Length = 206
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 20/220 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + E++ +G V PTD+ YA+ C L A+ER+ RI+ ++
Sbjct: 4 FFAIHPDNPQERLIRQAAEIVHKGGVIAYPTDSCYALGCRLGDKEAMERILRIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ Y + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLVCADLAELGIY--------AKVDNAQFRQLKAATPGSYTFILQATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++AI A+L+++ PL+S ++ +D E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNAIALALLRELGEPLLSCTLMLPEDEEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKGPKLYW 220
+D V+DGG EP+TVVDMT GT ++R+G+G K +
Sbjct: 167 SVDLVIDGGWCGTEPTTVVDMTDGTV--LVREGRGDKAVF 204
>gi|399016514|ref|ZP_10718728.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM16]
gi|398105020|gb|EJL95141.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM16]
Length = 501
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YAI C + +AIER+RR++ ++
Sbjct: 296 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKH 355
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 356 NFALICSDLSQLGNYA--------KIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 404
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 405 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQ 459
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P+++R G G +M E
Sbjct: 460 -VDLIIDGGFGGIKASTVIDLTGDDPEVVRVGCGDPTPFMVE 500
>gi|261821581|ref|YP_003259687.1| hypothetical protein Pecwa_2310 [Pectobacterium wasabiae WPP163]
gi|261605594|gb|ACX88080.1| Sua5/YciO/YrdC/YwlC family protein [Pectobacterium wasabiae WPP163]
gi|385871823|gb|AFI90343.1| Sua5/YciO/YrdC/YwlC family protein [Pectobacterium sp. SCC3193]
Length = 206
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE L +G V V PTD+ YA+ C L +A+ER+ RI+++ +++CR L ++ TY
Sbjct: 21 VEFLHKGGVIVYPTDSGYALGCMLGEKNALERICRIRDLGSDHNFTLMCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AHVDNSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------EKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++ PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALDLLAALNEPLMSTTLMLPGNDFAESDPEEIQEELG-KLVDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++ R+G G
Sbjct: 184 VIDLTESVPRVAREGTG 200
>gi|254251991|ref|ZP_04945309.1| Sua5/YciO/YrdC/YwlC [Burkholderia dolosa AUO158]
gi|124894600|gb|EAY68480.1| Sua5/YciO/YrdC/YwlC [Burkholderia dolosa AUO158]
Length = 210
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E++ +G V +PTD+ YA+ C L A+ER+RRI+ ++ +
Sbjct: 4 FFRIHPDNPQPRLIKQAAEIVSKGGVIAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQ 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
LS+L R L ++ + R +R +K PGPY FIL A+KEVP++
Sbjct: 64 HLSLLVRDLSELANFAMVDNRQ--------YRLIKSVTPGPYVFILQATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+ T++ D++ + DP I +
Sbjct: 112 ----SHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDDPLNDPEDIRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG EPSTV+D+TG P+++R G+G
Sbjct: 168 -VDLVIDGGACPREPSTVIDLTGDEPQLVRAGRG 200
>gi|434404338|ref|YP_007147223.1| translation factor SUA5 [Cylindrospermum stagnale PCC 7417]
gi|428258593|gb|AFZ24543.1| translation factor SUA5 [Cylindrospermum stagnale PCC 7417]
Length = 213
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 30/218 (13%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++E + L GA+ + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQNRRIEEIKSALFSGAIMLYPTDTVYAIGCDLNAKSAVERVRQIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDTA------YRIMKRLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN----EWMVDPVVIADTYGPEG 182
RK G+R+PN +C A+L + P+ISTS D+ E ++ + D E
Sbjct: 113 SPKRKTTGIRVPNHHVCLALLAALGNPIISTSAHLPPDDGVEPESILSQAELFDRL--EN 170
Query: 183 L-DFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
L D ++D G EP ST++D+T P I R+G G
Sbjct: 171 LVDIIIDTG---EEPTYQVSTILDLTADEPVITRRGLG 205
>gi|170768140|ref|ZP_02902593.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia albertii TW07627]
gi|170122906|gb|EDS91837.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia albertii TW07627]
Length = 218
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 21 PENPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 80
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 81 CRDLSELSTYSFV---------DNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 125
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 126 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 182
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 183 IIHGGYLGQKPTTVIDLTDNTPVVVREGVG 212
>gi|422008778|ref|ZP_16355762.1| hypothetical protein OOC_11876 [Providencia rettgeri Dmel1]
gi|414095251|gb|EKT56914.1| hypothetical protein OOC_11876 [Providencia rettgeri Dmel1]
Length = 206
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + VE+L +G V V PTD+ YAI C L+ A++R+ RI+ ++ +
Sbjct: 4 FFYVHPDNPQARLISQSVEILNKGGVIVYPTDSGYAIGCRLEEKDALQRICRIRQLDANH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y +FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLMCRDLSELSNY--------AHVDNTVFRLIKNNTPGNYTFILRATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I + +L+ + PL+STS+ D+ DP I D +
Sbjct: 114 ------EKRKTIGLRVPSNPIARDLLEAVGEPLMSTSLIMPGDDFTQSDPEEIRDLLDKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+ GG +P+TV+D T P + R G G
Sbjct: 168 -VDLVIHGGYIGQKPTTVIDFTDDTPVVARVGTG 200
>gi|386821382|ref|ZP_10108598.1| Sua5/YciO/YrdC/YwlC family protein [Joostella marina DSM 19592]
gi|386426488|gb|EIJ40318.1| Sua5/YciO/YrdC/YwlC family protein [Joostella marina DSM 19592]
Length = 207
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VVE+L+ G + + PTDT+Y + CD+ + A++++ RIK V+ K S +C L +
Sbjct: 16 EIQRVVEVLRNGGLVIYPTDTVYGLGCDITNSKALQKIARIKGVKLEKANFSFICADLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL + +PK + +K
Sbjct: 76 LSDYIR-------QIDTATFKILKRTLPGPYTFILPGNNSLPK----------DFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+RIP + I + +++++ P++STS++ + E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRIPANNIARTLVEQLGNPIVSTSIRDEDELIEYTTDPELILEKWD-NLVDVVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++G+ P I+R+GKG
Sbjct: 178 GDNVASTVIDLSGSEPVIVREGKG 201
>gi|374336330|ref|YP_005093017.1| hypothetical protein GU3_12560 [Oceanimonas sp. GK1]
gi|372986017|gb|AEY02267.1| hypothetical protein GU3_12560 [Oceanimonas sp. GK1]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + V ++++G V V PTD+ YAI C + +A+ER+ RI+ ++
Sbjct: 4 FFEIHPDNPQPRLINQAVAIVRQGGVVVYPTDSGYAIGCLVGDKNAMERICRIRQIDKEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + FR +K+ PG YTFIL A+KEVPK+
Sbjct: 64 NFTLVCRDLSELSAY--------ARVENTAFRLMKNNTPGAYTFILRATKEVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ AI A+L+ + PL+S S+ + E DP I +
Sbjct: 112 ----QNPKRKTIGLRVPDHAISLALLEALGEPLMSCSLILPGETEAEYDPFEIRHRL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGGV P+TVVD+ P I+R+G G
Sbjct: 167 VVDLIIDGGVLDPRPTTVVDLYDDNPVILREGAG 200
>gi|347536166|ref|YP_004843591.1| putative translation factor [Flavobacterium branchiophilum FL-15]
gi|345529324|emb|CCB69354.1| Putative translation factor [Flavobacterium branchiophilum FL-15]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 122/214 (57%), Gaps = 23/214 (10%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-P 62
E +P+ A ++ VV++L+ G + + PTDT+Y + CD+ + A+E++ +IK ++ K P
Sbjct: 9 EDNPNEA---AIQKVVKVLQNGGLIIYPTDTVYGLGCDITNSKALEKIAKIKGIKLEKAP 65
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L ++ Y Q F+ +K LPG YTFIL + +PK
Sbjct: 66 FSFICHDLSNLSDYIR-------QIDTATFKILKRALPGAYTFILPGNNNLPK------- 111
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPE 181
++ +K VG+R+P++ I + I++ + P++STS++ + E+ DP +I + + +
Sbjct: 112 ---EFKKKKTVGIRVPDNNIARQIVKTLGNPIVSTSIRDEDELIEYTTDPELIFEKWQNK 168
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST+VD++G P I+R+GKG
Sbjct: 169 -VDLVIDGGYGSNVASTIVDLSGFEPVILREGKG 201
>gi|409397541|ref|ZP_11248408.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. Chol1]
gi|409117996|gb|EKM94421.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. Chol1]
Length = 207
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + S IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRQGGVVVYPTDSSYAVGCSIGNKSGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGMF--------AKVDTAAFRLLKTHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L ++ PL+S S+ D M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLAELGEPLMSVSLILPGDELPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+D ++DGG E STVV + P+++R G G +M
Sbjct: 168 -VDLIIDGGYGGIEASTVVSLVDDQPQVLRVGCGDPAPFM 206
>gi|429085664|ref|ZP_19148629.1| YciO family [Cronobacter condimenti 1330]
gi|429086837|ref|ZP_19149569.1| YciO family [Cronobacter universalis NCTC 9529]
gi|426506640|emb|CCK14681.1| YciO family [Cronobacter universalis NCTC 9529]
gi|426545108|emb|CCJ74670.1| YciO family [Cronobacter condimenti 1330]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE++++G V V PTD+ YA+ C L+ A+ER+ RI+++ +++
Sbjct: 9 PDNPQPRLIKQAVEIVRKGGVIVYPTDSGYALGCKLEDKGAMERICRIRDLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ +D P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALDEPMLSTSLMLPGSEFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTDDAPVVLREGVG 200
>gi|409407062|ref|ZP_11255513.1| translation factor SUA5 [Herbaspirillum sp. GW103]
gi|386432813|gb|EIJ45639.1| translation factor SUA5 [Herbaspirillum sp. GW103]
Length = 211
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 18/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P ++ +++ +G + +PTD+ YA+VC L + A+ER+RRI+ V+
Sbjct: 4 FFEIHPDNPQLRLIKQAAQIIHKGGLVALPTDSCYALVCQLDNKDAVERVRRIRGVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L++LCR L +I Y R +R +K PG YTFIL A+KEVP++
Sbjct: 64 HLTLLCRDLSEIALYAKVDNRQ--------YRLLKAATPGAYTFILEATKEVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + I +L+++ PL+ T++ L D + + ++ +
Sbjct: 112 ----SHPSRKTIGLRVPENRIAHMLLEELGQPLLGTTL-ILPDEDLPLTSAEDIRSHLEK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
++ V+D G EP+TV+D+T P ++RQG+G
Sbjct: 167 RIELVIDSGACSLEPTTVIDLTDDNEPVLVRQGRG 201
>gi|150024959|ref|YP_001295785.1| translation factor [Flavobacterium psychrophilum JIP02/86]
gi|149771500|emb|CAL42969.1| Putative translation factor [Flavobacterium psychrophilum JIP02/86]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 120/218 (55%), Gaps = 24/218 (11%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + ++ VV++LK G + + PTDT+Y + CD+ + A+ER+ +IK ++ K
Sbjct: 4 FIKIYPDNPNEAAIKKVVDVLKNGGLIIYPTDTVYGLGCDITNTKALERIAKIKGIKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L +I Y Q F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFVCHDLSNISDYVK-------QIDTATFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADT 177
++ + VG+R+P++ I I++ + P++STS+ D+ E+ DP +I +
Sbjct: 112 -----EFKKKTTVGIRVPDNNIALEIVKMLGNPIVSTSIH--DDDEVIEYTTDPELIFEK 164
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG ST++D++G P++IR+GKG
Sbjct: 165 W-QNLVDLVIDGGYGDNVGSTIIDLSGHEPEVIREGKG 201
>gi|291326241|ref|ZP_06123711.2| Sua5/YciO/YrdC/YwlC family protein [Providencia rettgeri DSM 1131]
gi|291315158|gb|EFE55611.1| Sua5/YciO/YrdC/YwlC family protein [Providencia rettgeri DSM 1131]
Length = 220
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L +G V V PTD+ YAI C L+ A++R+ RI+ ++ + +++
Sbjct: 23 PDNPQARLISQSVEILNKGGVIVYPTDSGYAIGCRLEEKDALQRICRIRQLDANHNFTLM 82
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y +FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 83 CRDLSELSNY--------AHVDNTVFRLIKNNTPGNYTFILRATKEVPRRLMN------- 127
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L+ + PL+STS+ D+ DP I D + +D V
Sbjct: 128 -EKRKTIGLRVPSNPIARDLLEAVGEPLMSTSLIMPGDDFTQSDPEEIRDLLDKQ-VDLV 185
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D T P + R G G
Sbjct: 186 IHGGYIGQKPTTVIDFTDDTPVVARVGTG 214
>gi|91776228|ref|YP_545984.1| Sua5/YciO/YrdC/YwlC [Methylobacillus flagellatus KT]
gi|91710215|gb|ABE50143.1| Sua5/YciO/YrdC/YwlC [Methylobacillus flagellatus KT]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 18/222 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + V +L++G V PTD+ YA+ C L + A +R+R I+ V+ S
Sbjct: 4 YFVIHPENPQPRLINQAVAILRDGGVIAYPTDSSYALGCMLGNKEAQDRIRAIRGVDDSH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR+L ++ TY Q + FR +K PG YTFIL A++EVP++
Sbjct: 64 HFTLICRNLAELSTY--------AQVDNSQFRLLKANTPGQYTFILKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ R VG+R+P A+ A+L++++ P++S +++ D+ + + I D +
Sbjct: 112 ----QHPKRSTVGLRVPQHAVTLALLEELNEPMLSMTLQLPGDDAPLNEAWEIRDQLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLYWME 222
+D V+D G +P+TV+D+TG P ++R G G P + +E
Sbjct: 168 -VDLVIDAGACAFKPTTVIDLTGESPSLVRLGAGDPAPFGLE 208
>gi|365849221|ref|ZP_09389692.1| Sua5/YciO/YrdC/YwlC family protein [Yokenella regensburgei ATCC
43003]
gi|364569865|gb|EHM47487.1| Sua5/YciO/YrdC/YwlC family protein [Yokenella regensburgei ATCC
43003]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEEKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYA---------WVDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P+++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDSPEVLREGVG 200
>gi|442611010|ref|ZP_21025716.1| YciO family [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441746938|emb|CCQ11778.1| YciO family [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE++K G V V PTD+ YAI C + + A ER+ RI+ +E
Sbjct: 4 FFHIHPENPQVRLIRQAVEIIKNGGVVVYPTDSGYAIGCSIGNKQAKERIERIRGIEQHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D Q +FR +K+ PGPYTFI +KEVPK+ +
Sbjct: 64 NFTLMCRDLSELSTYA----RVDNQ----MFRLIKNNTPGPYTFIFKGTKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+ + I A+L+++ P++S S+ +N DP +I D +
Sbjct: 114 ------DKKKTIGMRVTSHPITVALLEELGEPMMSCSLILPGENFTESDPEMIRDRL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+ GG + +TV+D++ P I+R G G
Sbjct: 167 LVDLVIHGGYLAEQATTVIDLSEEEPVILRVGCG 200
>gi|77165846|ref|YP_344371.1| translation factor, Sua5/YciO/YrdC/YwlC [Nitrosococcus oceani ATCC
19707]
gi|254433299|ref|ZP_05046807.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus oceani AFC27]
gi|76884160|gb|ABA58841.1| translation factor SUA5 [Nitrosococcus oceani ATCC 19707]
gi|207089632|gb|EDZ66903.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus oceani AFC27]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P+ L V L++ + V PTD+ YA+ C + + +A +R+R+++ +
Sbjct: 4 YFRIHPANPQQRLLNQAVNFLQQEGLIVYPTDSGYALGCRVGNKAAADRIRQLRGLGNRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S++ R L ++ Y + + FR +K PG YTFI A++EVP++
Sbjct: 64 EFSLVSRDLSELSLY--------AKVGNSAFRLLKALTPGAYTFIFKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ + QA+L + PLIS+++ ++ + DP I D G +
Sbjct: 112 ----QDPKRRTIGIRVPDNTVTQALLATLGEPLISSTLLLPGEDIPLTDPEEIRDRIGSQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG EP+TVVD+ PK+IR+GKG + E
Sbjct: 168 -VDLIIDGGYCGFEPTTVVDLVEDMPKVIREGKGDTTIFKAE 208
>gi|336452034|ref|ZP_08622467.1| Sua5/YciO/YrdC/YwlC family protein [Idiomarina sp. A28L]
gi|336281081|gb|EGN74365.1| Sua5/YciO/YrdC/YwlC family protein [Idiomarina sp. A28L]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + + +++++G V V PTD+ Y I C L++ A+ER+ I+ +
Sbjct: 4 FFQIHPENPQNRLIVQAADIIRKGGVVVYPTDSGYGIGCQLQNKEAVERILNIRRLGSEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y R Q FR +K+ PGPYTF+L A+KEVPK+ +
Sbjct: 64 NFTLMCRDLSELSVYA----RVGNQA----FRLIKNNTPGPYTFVLMATKEVPKRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I QA+L +++ P++ST++ + + DP I +
Sbjct: 114 ------PKRKTIGLRVPDNDIAQALLTELNEPIMSTTMIFPDEEFAEPDPYEIRQRL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG + +P+TVVD+ +IIR G+G
Sbjct: 167 LVDLIIDGGHLMEKPTTVVDLVDDEVEIIRIGEG 200
>gi|238919595|ref|YP_002933110.1| Sua5/YciO/YrdC/YwlC family protein [Edwardsiella ictaluri 93-146]
gi|238869164|gb|ACR68875.1| Sua5/YciO/YrdC/YwlC family protein [Edwardsiella ictaluri 93-146]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VVE+L +G V V PTD+ YA+ C L+ SA+ER+ RI+ ++ + +++
Sbjct: 9 PENPQPRLIKQVVEVLHKGGVIVYPTDSGYALGCMLEEKSAMERICRIRRIDSNHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y + FR +K+ PG YTFIL ASK VP++ +
Sbjct: 69 CRDLSELSSYAF--------VNNAAFRLLKNNTPGGYTFILKASKGVPRRLMS------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I + +L ++ PL+STS+ + DP I + G + +D V
Sbjct: 114 -EKRKTIGLRVPSNPIARDLLAELGEPLMSTSLMLPESEFTESDPEEIQERLGKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P ++R G G
Sbjct: 172 IHGGYLGQQPTTVIDLTEDTPLVVRVGAG 200
>gi|251789771|ref|YP_003004492.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya zeae Ech1591]
gi|247538392|gb|ACT07013.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya zeae Ech1591]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L++G V V PTD+ YA+ C L+ +A+ER+ RI++++ + +++
Sbjct: 9 PQNPQPRLINQTVEILRKGGVIVYPTDSGYALGCMLEDKAAMERICRIRSLDQNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSSY--------AYVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L ++ PL+ST++ ++ DP I + G + +D V
Sbjct: 114 -EKRKTIGMRVPSNPIALELLAVLNEPLMSTTLMLPGNDFAESDPEEIQERLG-KLVDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T + P + R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTESVPVVAREGTG 200
>gi|410626321|ref|ZP_11337084.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
mesophila KMM 241]
gi|410154141|dbj|GAC23853.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
mesophila KMM 241]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ EL+ G V V PTD+ Y+I C + SA+E++ RI+ + +++
Sbjct: 9 PDNPQARLIKQACELIHNGQVVVYPTDSGYSIGCHMDDKSALEQICRIRQIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y Q FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEY--------AQVDNAAFRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+R+P++AI A+L+++ PL+ST++ DP I D + + +
Sbjct: 113 NPKRRTIGIRVPDNAIALALLEELGEPLMSTTLILPNAIVAESDPDEIRDKLEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D++ P+IIR+G G
Sbjct: 172 IHGGFLGEQPTTVIDLSDGEPRIIREGSG 200
>gi|428770516|ref|YP_007162306.1| translation factor SUA5 [Cyanobacterium aponinum PCC 10605]
gi|428684795|gb|AFZ54262.1| translation factor SUA5 [Cyanobacterium aponinum PCC 10605]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 36/231 (15%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E +P S +E + LK+GA+ + PTDT+YAI CD+ SA+E++R +K + KPL
Sbjct: 6 ELNPDNPQSRSIEQIASALKDGAIMLYPTDTVYAIGCDINVKSAVEKVRTLKRLANDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL I Y + +K +PGPYTF+L A+K VPK +
Sbjct: 66 TFLCSSLSKISEYAIVTDEA--------YYIMKRLIPGPYTFLLPATKLVPKLVMS---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVK------WLKDNEWMVDPVVIADT 177
RK G+R+P+ +CQAIL ++ P+ISTS + ++W + + D
Sbjct: 114 ----PKRKTTGIRVPDQNVCQAILTTLNNPVISTSAHINDEEGYSPSDDW--EKAKLFD- 166
Query: 178 YGPEGLDFVVDG----GVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEEE 224
Y + +D ++D G +V ST++D + P ++RQG G W E E
Sbjct: 167 YFDKLVDIIIDDYTDPGYQV---STILDFSTENPAVVRQGLG----WEELE 210
>gi|220909107|ref|YP_002484418.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7425]
gi|219865718|gb|ACL46057.1| Sua5/YciO/YrdC/YwlC family protein [Cyanothece sp. PCC 7425]
Length = 221
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 115/200 (57%), Gaps = 24/200 (12%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
L+ GAV + PTDT+YAI CDL A++R+R+IK++ KPL+ LC SL +I Y
Sbjct: 24 LRAGAVMLYPTDTVYAIGCDLNVKHAVQRVRQIKHLSNDKPLTFLCSSLSNIAHY----- 78
Query: 82 RGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDA 141
+ +R ++ +PGPYTF+L A+K VP+ A+ RK G+R+P+
Sbjct: 79 ---AYVSDSAYRLMRSLVPGPYTFLLPATKLVPR--------LAQEPKRKTTGIRVPDHP 127
Query: 142 ICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIA-----DTYGPEGLDFVVDGGVRVAEP 196
+CQ++L+ + +P+IST+ + L + E + V + D + +D +VD G + +
Sbjct: 128 VCQSLLESLGSPVISTAAR-LPEEEQTNESVELGSAELFDRFD-RLVDLIVDNGQKTGQQ 185
Query: 197 -STVVDMTGTYPKIIRQGKG 215
ST++D+ T P I+R+G G
Sbjct: 186 VSTILDLGATPPVIVRKGLG 205
>gi|417791926|ref|ZP_12439340.1| hypothetical protein CSE899_15220 [Cronobacter sakazakii E899]
gi|429115791|ref|ZP_19176709.1| YciO family [Cronobacter sakazakii 701]
gi|449308039|ref|YP_007440395.1| hypothetical protein CSSP291_07555 [Cronobacter sakazakii SP291]
gi|333953975|gb|EGL71863.1| hypothetical protein CSE899_15220 [Cronobacter sakazakii E899]
gi|426318920|emb|CCK02822.1| YciO family [Cronobacter sakazakii 701]
gi|449098072|gb|AGE86106.1| hypothetical protein CSSP291_07555 [Cronobacter sakazakii SP291]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE++++G V V PTD+ YA+ C L+ A+ER+ RI+++ +++
Sbjct: 9 PDNPQPRLIKQAVEIVRKGGVIVYPTDSGYALGCKLEDKGAMERICRIRDLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLIKNNTPGKYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ +D P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALDEPMLSTSLMLPGSEFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDAPVVLREGVG 200
>gi|330996846|ref|ZP_08320715.1| Sua5/YciO/YrdC/YwlC family protein [Paraprevotella xylaniphila YIT
11841]
gi|329572289|gb|EGG53948.1| Sua5/YciO/YrdC/YwlC family protein [Paraprevotella xylaniphila YIT
11841]
Length = 202
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 23/222 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + ++ +++L++G + + PTDT+YAI CD + A+ER+ +K V P
Sbjct: 1 MLIRIYPENPNPREMVKALKMLRDGELIIYPTDTVYAIGCDALNVRAVERICALKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L +I Y Q F+ +K LPGP+TFIL S +PK
Sbjct: 61 KSNLSIICYDLSNISEY--------AQVSNAAFKLLKKNLPGPFTFILPTSSRLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
Y +K VG+R+P+++I + +++ + PL++ SV + E+ DP +I + Y
Sbjct: 109 ------IYKNKKEVGIRVPDNSIARGLVEGLGNPLLTMSVHDEDEIIEYSTDPELIHEKY 162
Query: 179 GPEG-LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLY 219
EG + V+DGG +E STVVD +I+RQGKG L+
Sbjct: 163 --EGRVALVIDGGYGGSEASTVVDCVDDAFEIVRQGKGELLF 202
>gi|302878814|ref|YP_003847378.1| Sua5/YciO/YrdC/YwlC family protein [Gallionella capsiferriformans
ES-2]
gi|302581603|gb|ADL55614.1| Sua5/YciO/YrdC/YwlC family protein [Gallionella capsiferriformans
ES-2]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P+ + ++ V +LK+G + V PTD+ YA+ C L +A+ R+R I+ ++ L+++
Sbjct: 9 PNNINMRLIKQAVSILKDGGIVVYPTDSCYALGCLLDDKNAVSRIREIRQLDDEHYLTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I Y R D FR +K PG YTFIL A++EVPK+ +
Sbjct: 69 CRDLSEISNYA----RVDNAQ----FRLLKANTPGSYTFILEATREVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ R +G+RIP+ + A+L+++ P+ S+S L D W ++ + +D V
Sbjct: 113 HPKRSTIGIRIPDHPVALALLEELGEPM-SSSTLILPDEVWPLNDAERIRELLEKKVDAV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG + +TV+D+TG +P ++RQG G
Sbjct: 172 IDGGAAGVDFTTVIDLTGEHPVLLRQGIG 200
>gi|345299531|ref|YP_004828889.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter asburiae LF7a]
gi|345093468|gb|AEN65104.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter asburiae LF7a]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPDEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+ GG +P+TVVD+T P++IR+G G
Sbjct: 171 VIHGGYLGQQPTTVVDLTDDAPEVIREGVG 200
>gi|124267942|ref|YP_001021946.1| hypothetical protein Mpe_A2757 [Methylibium petroleiphilum PM1]
gi|124260717|gb|ABM95711.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P L+ V++L G + +PTD+ YA+VC L +A E LRRI+ V+
Sbjct: 3 QYFEVHPDNPQPRLLKQAVQILHGGGIAAIPTDSSYALVCHLDDKAAAESLRRIRGVDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ Y R D + +R +K PGPYTFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLSELANYA----RVDNRQ----YRLLKLGTPGPYTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ R+ +G+R+P A+ QA+L+ + PL++T++ + E + DP I +
Sbjct: 112 -----SHPSRRTIGLRVPEHAVTQALLELLGQPLLATTLIPPNEAEALNDPHEIRQRFEK 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L +VD G +P+TV+D++G ++R+G G
Sbjct: 167 Q-LQAIVDAGACPMQPTTVIDLSGDETVLVRRGSG 200
>gi|88859929|ref|ZP_01134568.1| putative RNA binding protein with YrdC/RibB domain
[Pseudoalteromonas tunicata D2]
gi|88817923|gb|EAR27739.1| putative RNA binding protein with YrdC/RibB domain
[Pseudoalteromonas tunicata D2]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+ +E++++G V V PTD+ YA+ C + + +A+ER++RI+++E L+++C L ++
Sbjct: 17 IRQAIEVIQKGGVIVYPTDSGYALGCSIGNKTAMERIQRIRSLEKHHNLTLVCCDLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
TY R D Q +FR VK+ PG YTFI +KEVPK+ + +K +G
Sbjct: 77 TYA----RVDNQ----MFRLVKNNTPGAYTFIFKGTKEVPKRLLN--------DKKKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+PN I QA+L ++ P++S S+ DP VI + +D ++DGG +
Sbjct: 121 IRVPNHKITQALLAELGEPIMSCSLILPGQEHTESDPEVIRSLLEKQ-VDLIIDGGYLIE 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+ +TV+D++ +I+R G G
Sbjct: 180 QATTVIDLSDDSVEILRVGCG 200
>gi|86133170|ref|ZP_01051752.1| YrdC protein [Polaribacter sp. MED152]
gi|85820033|gb|EAQ41180.1| YrdC protein [Polaribacter sp. MED152]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 20/204 (9%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ V++LK G + + PTDT+Y + CD+ + A+E++ IK ++ K S +C L
Sbjct: 16 EIQKAVKVLKNGGLIIYPTDTVYGLGCDITNTKALEKIALIKGIKLDKANFSFVCNDLSH 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q + F+ +K LPGPYTFIL S +PK + RK
Sbjct: 76 LSDYVK-------QLDSPTFKLLKRALPGPYTFILPGSNNLPK----------VFKKRKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVDGGV 191
VG+RIP++ I + +++ + P++S+S++ D E+ DP +I + + +D V+DGG
Sbjct: 119 VGIRIPDNNIARTLVEALGNPIVSSSIRDDDDILEYTTDPELIYEKWN-NLVDLVIDGGY 177
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
+ ST++D+T P++IR+GKG
Sbjct: 178 GDNQASTIIDLTDNVPEVIREGKG 201
>gi|82776624|ref|YP_402973.1| hypothetical protein SDY_1335 [Shigella dysenteriae Sd197]
gi|81240772|gb|ABB61482.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 218
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 21 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAVERICRIRQLPDGHNFTLM 80
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 81 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 125
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 126 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 182
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 183 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 212
>gi|389840793|ref|YP_006342877.1| Sua5/YciO/YrdC/YwlC family protein [Cronobacter sakazakii ES15]
gi|424799831|ref|ZP_18225373.1| YciO family [Cronobacter sakazakii 696]
gi|429104873|ref|ZP_19166742.1| YciO family [Cronobacter malonaticus 681]
gi|429110537|ref|ZP_19172307.1| YciO family [Cronobacter malonaticus 507]
gi|387851269|gb|AFJ99366.1| Sua5/YciO/YrdC/YwlC family protein [Cronobacter sakazakii ES15]
gi|423235552|emb|CCK07243.1| YciO family [Cronobacter sakazakii 696]
gi|426291596|emb|CCJ92855.1| YciO family [Cronobacter malonaticus 681]
gi|426311694|emb|CCJ98420.1| YciO family [Cronobacter malonaticus 507]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE++++G V V PTD+ YA+ C L+ A+ER+ RI+++ +++
Sbjct: 9 PDNPQPRLIKQAVEIVRKGGVIVYPTDSGYALGCKLEDKGAMERICRIRDLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ +D P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALDEPMLSTSLMLPGSEFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDAPVVLREGVG 200
>gi|402830940|ref|ZP_10879633.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Capnocytophaga sp. CM59]
gi|402282989|gb|EJU31511.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Capnocytophaga sp. CM59]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 22/217 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + +++ VVE L++G V + PTDT+Y + CD+ A+ER+ +K V+ K
Sbjct: 4 FIKIYPENPNEREIQKVVECLRDGGVIIYPTDTVYGLGCDITHSKALERIAHLKGVKLDK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPG YTFIL + +PK
Sbjct: 64 ANFSFVCADLSNLSDYVK-------QIDTATFKLLKRALPGAYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTY 178
++ +K VG+R+P++ I + +++K+ P++S+S+ + +D E+ DP +I + +
Sbjct: 112 -----EFKKKKTVGIRVPDNNIARTLVEKLGNPIVSSSI-YDEDEVVEYTTDPELIFEKW 165
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG ST++D++ P++IR+GKG
Sbjct: 166 -QDKVDIVIDGGYGDNVASTIIDLSTGVPELIREGKG 201
>gi|347820519|ref|ZP_08873953.1| Sua5/YciO/YrdC/YwlC family protein, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 200
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 28/221 (12%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y E P L+ LL+ G + VPTD+ YA+VC L A++RLRRI+ V+
Sbjct: 4 YFEVHPENPQPRLLKQAATLLQGGGIAAVPTDSSYALVCHLDDRDAVDRLRRIREVDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI----FRAVKHCLPGPYTFILTASKEVPKKC 117
L++LCR L ++ + HA++ +R ++ PGPYTFIL A+K+VP++
Sbjct: 64 HLTLLCRDLSELAS------------HAHVDNRQYRLLRLGTPGPYTFILEATKQVPRRV 111
Query: 118 VRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADT 177
+ RK +G+R+P Q +L+ APL++T++ +E + DP I
Sbjct: 112 --------SHPARKTIGLRVPGHRSLQLLLELHGAPLLATTLIPAGASEPLNDPQDIRAR 163
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
Y + LD +VD G EP+TV+D+T P G GP L
Sbjct: 164 YQ-KLLDAIVDAGACPLEPTTVLDLT---PMGAGAGVGPTL 200
>gi|339494423|ref|YP_004714716.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
gi|338801795|gb|AEJ05627.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YAI C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAIGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT ILTA++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLF--------AKVDTAAFRLLKAHLPGPYTIILTATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ ++ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPALPIAQALLEELGEPLMSVSLILPGEDLPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E STVV + P+++R G G
Sbjct: 168 -VDLVIDGGYGGLEASTVVSLVDDQPEVVRVGCG 200
>gi|309789073|ref|ZP_07683668.1| yrdC domain protein [Shigella dysenteriae 1617]
gi|308923344|gb|EFP68856.1| yrdC domain protein [Shigella dysenteriae 1617]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAVERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|423124203|ref|ZP_17111882.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5250]
gi|376401290|gb|EHT13900.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5250]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+N+ +++
Sbjct: 9 PENPQARLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRNLPNGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQMLLETLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDAPVVVREGVG 200
>gi|398979716|ref|ZP_10688602.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM25]
gi|398135449|gb|EJM24566.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM25]
Length = 222
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V V PTD+ YAI C + + IER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVVYPTDSSYAIGCQIGDKNGIERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + Y + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGNY--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ + + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGEEDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+D+TG P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVIDLTGDDPEVIRVGCGDPAPFMVE 221
>gi|423107971|ref|ZP_17095666.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5243]
gi|423113941|ref|ZP_17101632.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5245]
gi|376386704|gb|EHS99415.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5243]
gi|376387586|gb|EHT00296.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5245]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+N+ +++
Sbjct: 9 PENPQARLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRNLPNGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ + DP I D + +D
Sbjct: 114 --DKRKTIGMRVPSNPIAQMLLETLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDVPVVVREGVG 200
>gi|349575833|ref|ZP_08887738.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria shayeganii 871]
gi|348012577|gb|EGY51519.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria shayeganii 871]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ ++++ G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLVKQAADIVRNGGVIVYPTDSCYALGCHLGDKAAMERILAIRQIDLRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNSQFRQLKAATPGAYTFILPATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L ++ P++S ++ +D+E + DP I D
Sbjct: 113 -----HPKRKTIGLRVPDNRIALALLAELGEPMLSCTLMLPEDSEPLTDPYEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT ++IRQG G
Sbjct: 167 SVDLVIDGGWCGTEPTTVIDMTDGT--ELIRQGAG 199
>gi|375260462|ref|YP_005019632.1| hypothetical protein KOX_18355 [Klebsiella oxytoca KCTC 1686]
gi|397657542|ref|YP_006498244.1| YciO family [Klebsiella oxytoca E718]
gi|402842900|ref|ZP_10891303.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Klebsiella sp. OBRC7]
gi|423102626|ref|ZP_17090328.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5242]
gi|365909940|gb|AEX05393.1| hypothetical protein KOX_18355 [Klebsiella oxytoca KCTC 1686]
gi|376388102|gb|EHT00803.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5242]
gi|394345975|gb|AFN32096.1| YciO family [Klebsiella oxytoca E718]
gi|402278286|gb|EJU27350.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Klebsiella sp. OBRC7]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+N+ +++
Sbjct: 9 PENPQARLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRNLPNGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ + DP I D + +D
Sbjct: 114 --DKRKTIGMRVPSNPIAQMLLETLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDAPVVVREGVG 200
>gi|397687540|ref|YP_006524859.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri DSM 10701]
gi|395809096|gb|AFN78501.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri DSM 10701]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YAI C + + + IER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRNGGVVVYPTDSSYAIGCAMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTVAFRLLKTHLPGPYTIILNATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L ++ PL+S S+ ++E M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLAELGEPLMSVSLILPGESEPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STV+ + P+++R G G
Sbjct: 168 -VDLIIDGGYGGVEASTVISLVDGEPEVLRVGCG 200
>gi|209522642|ref|ZP_03271200.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira maxima CS-328]
gi|423063160|ref|ZP_17051950.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira platensis C1]
gi|209496691|gb|EDZ96988.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira maxima CS-328]
gi|406715282|gb|EKD10438.1| Sua5/YciO/YrdC/YwlC family protein [Arthrospira platensis C1]
Length = 222
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 29/223 (13%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P +E + + LK GAV + PTDT+YAI CDL SA++++R+IK + KPL
Sbjct: 6 EIHPQNPQKRTIEQIKDALKRGAVMLYPTDTVYAIGCDLTVKSAVQKVRQIKQISNDKPL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
+ LC SL +I Y +R +K +PG YTF+L A+K VPK +
Sbjct: 66 TFLCSSLSNIADYAIVTDAA--------YRTIKRLIPGSYTFVLPATKLVPKLVMS---- 113
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---------WMVDPVVI 174
RK G+R+P+ +C AIL+ + P+ISTS +++E D V +
Sbjct: 114 ----PKRKTTGIRVPDHPVCLAILESLGNPVISTSAHIKEEDEPSALIKKIPQEYDKVQL 169
Query: 175 ADTYGPEGL-DFVVDGGVR-VAEPSTVVDMTGTYPKIIRQGKG 215
D E L D +VD G + ST++D++ P ++R+GKG
Sbjct: 170 FDAL--ENLVDIIVDDGADWDYQVSTIIDLSADDPVLVRRGKG 210
>gi|425747468|ref|ZP_18865471.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-348]
gi|425493386|gb|EKU59618.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-348]
Length = 205
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VVE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQVVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFSTLTTTSIVDLSGEHPEIIRRGVG 199
>gi|386308515|ref|YP_006004571.1| ycio family [Yersinia enterocolitica subsp. palearctica Y11]
gi|318605611|emb|CBY27109.1| ycio family [Yersinia enterocolitica subsp. palearctica Y11]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 114/197 (57%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 21 VDVLRKGGVVVYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFI A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNPAFRLIKNNTPGNYTFIFKATKEVPRRLMN--------DKRKTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L + PL+ST++ ++ DP I + G + +D ++ GG +P+T
Sbjct: 125 SNPIALALLDVLGEPLMSTTLMLPGNDFAESDPEEIKEHLGKQ-VDLIIHGGSLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T + P++IR G G
Sbjct: 184 VIDLTDSSPEVIRVGAG 200
>gi|359799439|ref|ZP_09302000.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter arsenitoxydans
SY8]
gi|359362543|gb|EHK64279.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter arsenitoxydans
SY8]
Length = 208
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P+ L+ + L +G + VPTD+ YA+V L SA + LRR++ ++
Sbjct: 3 LFLSIHPANPQPRLLKQAAQWLNDGGLVAVPTDSSYAVVARLDDKSAADGLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEIGH----FARVDNKQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P++++ +L++ APL+ST++ + E + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDNSVILGLLEQAGAPLLSTTLIPKDETEALNDAEDIRERYDH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G P+TV+D+TG P ++R G+G
Sbjct: 167 D-LAAIIDAGACPQSPTTVIDLTGDDPVVVRVGRG 200
>gi|312129970|ref|YP_003997310.1| translation factor sua5 [Leadbetterella byssophila DSM 17132]
gi|311906516|gb|ADQ16957.1| translation factor SUA5 [Leadbetterella byssophila DSM 17132]
Length = 205
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 26/218 (11%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK- 61
+E P D K++ VVE L +G + + PTDT+Y++ C+ + A+E+L +IK ++P++
Sbjct: 6 IEIVPGNPDMRKIKQVVECLMDGGIIIYPTDTVYSMGCNSYHNKAVEKLCKIKGIKPNQN 65
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
SI+C L DI TY + FR +K LPGPYTFIL ++ E+PK
Sbjct: 66 KFSIVCHDLSDIATY--------AKVSNEAFRTMKQYLPGPYTFILPSTNELPK------ 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ I Q +++++ P+I+TSVK+ E+ + VI + E
Sbjct: 112 ---LLQTSRKTIGIRVPDHMIPQTLIKELGRPIITTSVKYDDIREYPNEIEVIYE----E 164
Query: 182 GL---DFVVDGGVRVAEPSTVVDMTG-TYPKIIRQGKG 215
+ D ++DGG PST+VD T + ++IR+G G
Sbjct: 165 NMYLADIIIDGGWCGIVPSTIVDCTDPDHFEVIREGLG 202
>gi|88802782|ref|ZP_01118309.1| putative Sua5/yciO/yrdC family protein [Polaribacter irgensii 23-P]
gi|88781640|gb|EAR12818.1| putative Sua5/yciO/yrdC family protein [Polaribacter irgensii 23-P]
Length = 205
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 114/200 (57%), Gaps = 21/200 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
+V++L+ G + + PTDT+Y + CD+ A+E++ ++K V+ K S +C L + Y
Sbjct: 20 IVKVLQAGGLVIYPTDTVYGLGCDITKVKALEKIAQLKGVKLDKANFSFICNDLSHLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q + F+ +K LPGPYTFIL S +PK + +K VG+R
Sbjct: 80 VK-------QIDSTTFKILKRALPGPYTFILPGSTNLPK----------VFKKKKTVGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGVRVAE 195
IP++ I + ++ ++ P++STS++ D E+ DP +I + + +D V+DGG E
Sbjct: 123 IPDNNIIRMLVAELGNPIVSTSIRDEDDVLEYTTDPELIFEKW-QNSVDVVIDGGYGDNE 181
Query: 196 PSTVVDMTGTYPKIIRQGKG 215
PSTV+D+T PK+IR+GKG
Sbjct: 182 PSTVIDLTEA-PKVIREGKG 200
>gi|354723831|ref|ZP_09038046.1| hypothetical protein EmorL2_13288 [Enterobacter mori LMG 25706]
Length = 206
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS++ DP I D + ++
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLRLPGSEFTESDPEEIKDRL-EKVVEL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTEDAPEVIREGVG 200
>gi|15801912|ref|NP_287932.1| hypothetical protein Z2543 [Escherichia coli O157:H7 str. EDL933]
gi|24112666|ref|NP_707176.1| hypothetical protein SF1270 [Shigella flexneri 2a str. 301]
gi|26247596|ref|NP_753636.1| hypothetical protein c1732 [Escherichia coli CFT073]
gi|30062790|ref|NP_836961.1| hypothetical protein S1355 [Shigella flexneri 2a str. 2457T]
gi|74312363|ref|YP_310782.1| hypothetical protein SSON_1876 [Shigella sonnei Ss046]
gi|82544279|ref|YP_408226.1| hypothetical protein SBO_1799 [Shigella boydii Sb227]
gi|91210558|ref|YP_540544.1| hypothetical protein UTI89_C1535 [Escherichia coli UTI89]
gi|110805270|ref|YP_688790.1| hypothetical protein SFV_1280 [Shigella flexneri 5 str. 8401]
gi|117623527|ref|YP_852440.1| hypothetical protein APECO1_427 [Escherichia coli APEC O1]
gi|162139712|ref|NP_309866.3| hypothetical protein ECs1839 [Escherichia coli O157:H7 str. Sakai]
gi|170681810|ref|YP_001743920.1| hypothetical protein EcSMS35_1866 [Escherichia coli SMS-3-5]
gi|187776059|ref|ZP_02800082.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4196]
gi|188025120|ref|ZP_02776177.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4113]
gi|189010692|ref|ZP_02808776.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4076]
gi|189403568|ref|ZP_02796272.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4486]
gi|189404340|ref|ZP_02788593.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4501]
gi|189405385|ref|ZP_02815073.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC869]
gi|189406137|ref|ZP_02826620.2| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC508]
gi|191171102|ref|ZP_03032653.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli F11]
gi|193062588|ref|ZP_03043682.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E22]
gi|194425821|ref|ZP_03058377.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B171]
gi|194436951|ref|ZP_03069050.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 101-1]
gi|208810838|ref|ZP_03252671.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4206]
gi|208815519|ref|ZP_03256698.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4045]
gi|208819462|ref|ZP_03259782.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4042]
gi|209400954|ref|YP_002270321.1| hypothetical protein ECH74115_1899 [Escherichia coli O157:H7 str.
EC4115]
gi|217329124|ref|ZP_03445204.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
TW14588]
gi|227886305|ref|ZP_04004110.1| RNA binding protein [Escherichia coli 83972]
gi|237705290|ref|ZP_04535771.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|291282354|ref|YP_003499172.1| hypothetical protein G2583_1606 [Escherichia coli O55:H7 str.
CB9615]
gi|331641825|ref|ZP_08342960.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H736]
gi|331646588|ref|ZP_08347691.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M605]
gi|331652304|ref|ZP_08353323.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M718]
gi|331672792|ref|ZP_08373578.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA280]
gi|331677045|ref|ZP_08377741.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H591]
gi|332279543|ref|ZP_08391956.1| yciO [Shigella sp. D9]
gi|384542904|ref|YP_005726966.1| hypothetical protein SFxv_1441 [Shigella flexneri 2002017]
gi|386623867|ref|YP_006143595.1| putative RNA binding protein [Escherichia coli O7:K1 str. CE10]
gi|386629043|ref|YP_006148763.1| hypothetical protein i02_1563 [Escherichia coli str. 'clone D i2']
gi|386633963|ref|YP_006153682.1| hypothetical protein i14_1563 [Escherichia coli str. 'clone D i14']
gi|386704997|ref|YP_006168844.1| hypothetical protein P12B_c1824 [Escherichia coli P12b]
gi|387882324|ref|YP_006312626.1| hypothetical protein CDCO157_1759 [Escherichia coli Xuzhou21]
gi|416262125|ref|ZP_11640647.1| YciO family [Shigella dysenteriae CDC 74-1112]
gi|416291481|ref|ZP_11649935.1| YciO family [Shigella flexneri CDC 796-83]
gi|416311358|ref|ZP_11657046.1| YciO family [Escherichia coli O157:H7 str. 1044]
gi|416336102|ref|ZP_11672750.1| YciO family [Escherichia coli WV_060327]
gi|416344551|ref|ZP_11678406.1| YciO family [Escherichia coli EC4100B]
gi|417084140|ref|ZP_11951924.1| hypothetical protein i01_01762 [Escherichia coli cloneA_i1]
gi|417132711|ref|ZP_11977496.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 5.0588]
gi|417137610|ref|ZP_11981400.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 97.0259]
gi|417154508|ref|ZP_11992637.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 96.0497]
gi|417159262|ref|ZP_11996412.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 99.0741]
gi|417172450|ref|ZP_12002483.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.2608]
gi|417181381|ref|ZP_12008516.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 93.0624]
gi|417199653|ref|ZP_12017056.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4.0522]
gi|417221947|ref|ZP_12025387.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 96.154]
gi|417233340|ref|ZP_12034104.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 5.0959]
gi|417253888|ref|ZP_12045644.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4.0967]
gi|417262786|ref|ZP_12050248.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 2.3916]
gi|417266542|ref|ZP_12053910.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.3884]
gi|417274635|ref|ZP_12061975.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 2.4168]
gi|417278316|ref|ZP_12065631.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.2303]
gi|417283877|ref|ZP_12071174.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3003]
gi|417289103|ref|ZP_12076388.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TW07793]
gi|417290333|ref|ZP_12077616.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B41]
gi|417307767|ref|ZP_12094627.1| hypothetical protein PPECC33_11990 [Escherichia coli PCN033]
gi|417661912|ref|ZP_12311493.1| YciO family [Escherichia coli AA86]
gi|421776734|ref|ZP_16213336.1| RNA binding protein [Escherichia coli AD30]
gi|424837711|ref|ZP_18262348.1| hypothetical protein SF5M90T_1255 [Shigella flexneri 5a str. M90T]
gi|427804407|ref|ZP_18971474.1| hypothetical protein BN16_18181 [Escherichia coli chi7122]
gi|427808989|ref|ZP_18976054.1| hypothetical protein BN17_11141 [Escherichia coli]
gi|442596088|ref|ZP_21013910.1| YciO family [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442607680|ref|ZP_21022445.1| YciO family [Escherichia coli Nissle 1917]
gi|12515530|gb|AAG56548.1|AE005380_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26107998|gb|AAN80198.1|AE016760_57 Protein yciO [Escherichia coli CFT073]
gi|13361304|dbj|BAB35262.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24051580|gb|AAN42883.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041038|gb|AAP16768.1| hypothetical protein S1355 [Shigella flexneri 2a str. 2457T]
gi|73855840|gb|AAZ88547.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81245690|gb|ABB66398.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|91072132|gb|ABE07013.1| hypothetical protein UTI89_C1535 [Escherichia coli UTI89]
gi|110614818|gb|ABF03485.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115512651|gb|ABJ00726.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|170519528|gb|ACB17706.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli SMS-3-5]
gi|187769320|gb|EDU33164.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4196]
gi|188014770|gb|EDU52892.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4113]
gi|188998955|gb|EDU67941.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4076]
gi|189359972|gb|EDU78391.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366283|gb|EDU84699.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4501]
gi|189370440|gb|EDU88856.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC869]
gi|189376257|gb|EDU94673.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC508]
gi|190908834|gb|EDV68422.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli F11]
gi|192931710|gb|EDV84310.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E22]
gi|194415876|gb|EDX32142.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B171]
gi|194423934|gb|EDX39922.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 101-1]
gi|208724344|gb|EDZ74052.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732167|gb|EDZ80855.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4045]
gi|208739585|gb|EDZ87267.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4042]
gi|209162354|gb|ACI39787.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4115]
gi|209772038|gb|ACI84331.1| hypothetical protein ECs1839 [Escherichia coli]
gi|209772040|gb|ACI84332.1| hypothetical protein ECs1839 [Escherichia coli]
gi|209772042|gb|ACI84333.1| hypothetical protein ECs1839 [Escherichia coli]
gi|209772044|gb|ACI84334.1| hypothetical protein ECs1839 [Escherichia coli]
gi|209772046|gb|ACI84335.1| hypothetical protein ECs1839 [Escherichia coli]
gi|217317563|gb|EEC25991.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
TW14588]
gi|226900047|gb|EEH86306.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227836509|gb|EEJ46975.1| RNA binding protein [Escherichia coli 83972]
gi|281600689|gb|ADA73673.1| hypothetical protein SFxv_1441 [Shigella flexneri 2002017]
gi|290762227|gb|ADD56188.1| hypothetical protein G2583_1606 [Escherichia coli O55:H7 str.
CB9615]
gi|320176681|gb|EFW51719.1| YciO family [Shigella dysenteriae CDC 74-1112]
gi|320187505|gb|EFW62191.1| YciO family [Shigella flexneri CDC 796-83]
gi|320195720|gb|EFW70345.1| YciO family [Escherichia coli WV_060327]
gi|320199302|gb|EFW73893.1| YciO family [Escherichia coli EC4100B]
gi|326343314|gb|EGD67081.1| YciO family [Escherichia coli O157:H7 str. 1044]
gi|330911130|gb|EGH39640.1| YciO family [Escherichia coli AA86]
gi|331038623|gb|EGI10843.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H736]
gi|331045340|gb|EGI17467.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M605]
gi|331050582|gb|EGI22640.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M718]
gi|331070013|gb|EGI41382.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA280]
gi|331075734|gb|EGI47032.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H591]
gi|332101895|gb|EGJ05241.1| yciO [Shigella sp. D9]
gi|338770546|gb|EGP25306.1| hypothetical protein PPECC33_11990 [Escherichia coli PCN033]
gi|349737605|gb|AEQ12311.1| putative RNA binding protein [Escherichia coli O7:K1 str. CE10]
gi|355352188|gb|EHG01372.1| hypothetical protein i01_01762 [Escherichia coli cloneA_i1]
gi|355419942|gb|AER84139.1| hypothetical protein i02_1563 [Escherichia coli str. 'clone D i2']
gi|355424862|gb|AER89058.1| hypothetical protein i14_1563 [Escherichia coli str. 'clone D i14']
gi|383103165|gb|AFG40674.1| hypothetical protein P12B_c1824 [Escherichia coli P12b]
gi|383466763|gb|EID61784.1| hypothetical protein SF5M90T_1255 [Shigella flexneri 5a str. M90T]
gi|386150565|gb|EIH01854.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 5.0588]
gi|386159174|gb|EIH15507.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 97.0259]
gi|386167597|gb|EIH34113.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 96.0497]
gi|386175277|gb|EIH47268.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 99.0741]
gi|386180148|gb|EIH57622.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.2608]
gi|386185203|gb|EIH67936.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 93.0624]
gi|386188183|gb|EIH76991.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4.0522]
gi|386201749|gb|EII00740.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 96.154]
gi|386203606|gb|EII08124.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 5.0959]
gi|386215815|gb|EII32307.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4.0967]
gi|386223470|gb|EII45831.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 2.3916]
gi|386231352|gb|EII58700.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.3884]
gi|386233063|gb|EII65048.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 2.4168]
gi|386238569|gb|EII75504.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3.2303]
gi|386243820|gb|EII85553.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 3003]
gi|386247895|gb|EII94068.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TW07793]
gi|386256371|gb|EIJ06059.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B41]
gi|386795782|gb|AFJ28816.1| hypothetical protein CDCO157_1759 [Escherichia coli Xuzhou21]
gi|408458116|gb|EKJ81905.1| RNA binding protein [Escherichia coli AD30]
gi|412962589|emb|CCK46504.1| hypothetical protein BN16_18181 [Escherichia coli chi7122]
gi|412969168|emb|CCJ43798.1| hypothetical protein BN17_11141 [Escherichia coli]
gi|441655507|emb|CCP99823.1| YciO family [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441711152|emb|CCQ08422.1| YciO family [Escherichia coli Nissle 1917]
Length = 218
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 21 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 80
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 81 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 125
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 126 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 182
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 183 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 212
>gi|417297622|ref|ZP_12084866.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 900105 (10e)]
gi|386258834|gb|EIJ14311.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 900105 (10e)]
Length = 218
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 21 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 80
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 81 CRDLSELSTYSFV---------DNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 125
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 126 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 182
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 183 IIHGGYLGQKPTTVIDLTDDKPVVVREGVG 212
>gi|340621835|ref|YP_004740287.1| hypothetical protein Ccan_10640 [Capnocytophaga canimorsus Cc5]
gi|339902101|gb|AEK23180.1| Uncharacterized protein yciO [Capnocytophaga canimorsus Cc5]
Length = 206
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+ + ++ VV +LK G V + PTDT+Y + CD+ A+ER+ +IK V+ K
Sbjct: 4 YIRIYNENPNEREINRVVNILKSGGVVIYPTDTVYGLGCDITHTKALERIAKIKGVKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q + F+ +K LPGPYTFIL + ++P
Sbjct: 64 ANFSFVCADLSNLSHYVK-------QIDSATFKILKRALPGPYTFILPGNNDLP------ 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
+ + +K VG+R+P++ I + I++++ P++STS+ D E+ DP +I + +
Sbjct: 111 ----SAFKKKKTVGIRVPDNNIARIIVERLGNPIVSTSIHDDDDVIEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G STV+D++G+ P ++R+GKG
Sbjct: 166 QNRVDAVIDAGYGDNVASTVIDLSGSQPVVLREGKG 201
>gi|319764020|ref|YP_004127957.1| sua5/ycio/yrdc/ywlc family protein [Alicycliphilus denitrificans
BC]
gi|317118581|gb|ADV01070.1| Sua5/YciO/YrdC/YwlC family protein [Alicycliphilus denitrificans
BC]
Length = 211
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
L+ LL G + VPTD+ YA+VC L A++R+RR++ + L++LCR L ++
Sbjct: 17 LKQAAALLSGGGILAVPTDSSYALVCRLDDRDAVDRIRRVRQINDKHHLTLLCRDLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
+Y R +R +K PGPYTF+L A+KEVP++ + RK +G
Sbjct: 77 SYAHVDNRQ--------YRLLKLATPGPYTFLLDATKEVPRRV--------SHPQRKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P+ Q +L+ PL++T++ + E + DP I + Y + +D ++D G
Sbjct: 121 LRVPDRKGLQMLLELHGTPLLATTLIPAGETEPLNDPQEIRERYEKQ-IDGIIDAGACPL 179
Query: 195 EPSTVVDM----TGTYPKIIRQGKG 215
EP+TV+D+ TG P ++R+G+G
Sbjct: 180 EPTTVLDLTPMSTGDDPVVVREGRG 204
>gi|381394438|ref|ZP_09920155.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379330040|dbj|GAB55288.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 206
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ EL+K+G V V PTD+ YAI C +++ A++++ I+++ +++
Sbjct: 9 PDNPQVRLIKQTCELIKKGEVIVYPTDSGYAIGCQMENKKALDQICTIRDIPKEHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y + + FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSIY--------ARVNNVAFRQIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+PN+AI AIL+++ PL+ST++ DP I D + + +
Sbjct: 113 NPKRKTIGIRVPNNAIALAILEELGEPLMSTTLILPNAAMAETDPEQIRDKL-EKRIGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V GG +P+TV+DM+ IIR+G G
Sbjct: 172 VHGGYLGEQPTTVIDMSEGETTIIRRGSG 200
>gi|359779496|ref|ZP_09282723.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas psychrotolerans
L19]
gi|359372112|gb|EHK72676.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas psychrotolerans
L19]
Length = 209
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++E P S + VE+++ G V PTD+ YA+ C + SA+ER+RRI+ ++
Sbjct: 4 FIEIHPQNPQSRLIRQAVEIIQSGGVIAYPTDSSYALGCRIGEKSAVERIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L ++ Y + + FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCCDLSELGIY--------AKVDTSAFRLLKAYTPGPYTFILNATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L+ + PL+S S+ D+E + D I +
Sbjct: 113 -----HPKRRTIGVRVPHHPITLALLEALGEPLMSVSLILPGDDEALGDAWEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D V++GG +PSTV+ + P++IR G G +M E
Sbjct: 167 FVDLVIEGGPGGLQPSTVISLADDEPEVIRVGAGDPTPFMIE 208
>gi|293606645|ref|ZP_06689000.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter piechaudii ATCC
43553]
gi|292814929|gb|EFF74055.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter piechaudii ATCC
43553]
Length = 208
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+ P+ L+ + L +G + VPTD+ YA+V L A + LRR++ ++
Sbjct: 3 LYLSIHPANPQPRLLKQAAQWLNDGGLLAVPTDSSYAVVARLDDKDAADGLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEIGH----FARVDNKQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ +L+++ APL+ST++ + E + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDHAVMLGLLEQVGAPLLSTTLIPKNETEALNDAEAIRERYDH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G P+TV+D+T P ++R G+G
Sbjct: 167 D-LAAIIDAGACPQSPTTVIDLTSDDPVVVRVGRG 200
>gi|330503928|ref|YP_004380797.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina NK-01]
gi|328918214|gb|AEB59045.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina NK-01]
Length = 208
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 4 FFQVHPENPQARLIKQAVEIIRGGGVVVYPTDSSYALGCAIGDKNAVERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L I + + FR +K+ PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSQIGLF--------AKVDTAAFRLLKNHTPGPYTFILNATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L+++ PL+S S+ D M DP +
Sbjct: 113 -----HPKRRTIGIRVPSHPIALALLEQLGEPLMSVSLIMPGDELPMSDPYEMRQIL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV++ P+++R G G
Sbjct: 167 HVDLIIDGGFGGLEASTVVNLADESPQVLRVGCG 200
>gi|51244753|ref|YP_064637.1| hypothetical protein DP0901 [Desulfotalea psychrophila LSv54]
gi|50875790|emb|CAG35630.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 203
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 18/215 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P ++ VV+ L++GA+ PTDT Y I CDL + A++ L ++K +
Sbjct: 1 MLLEINPYNPQDRLIKQVVQKLQQGAIICYPTDTGYGIGCDLLNQRAVKALMQLKKRPKN 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C L I Y +R +K LPGPYTF+L SK VPK
Sbjct: 61 KPFSFMCSGLTHISEY--------AHVSNTAYRLLKKNLPGPYTFVLPGSKLVPK----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K VG+R+P++ I QA++ + P+++TSV+ +D+E + DP I G
Sbjct: 108 ----VMATKQKTVGIRVPDNPISQALITALGNPIVNTSVQLGEDDEPLADPFEIDLAIG- 162
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG +PS+V+D+T P+I+R GKG
Sbjct: 163 NRIDIIIDGGSIYPDPSSVIDLTTDQPEILRVGKG 197
>gi|222111934|ref|YP_002554198.1| sua5/ycio/yrdc/ywlc family protein [Acidovorax ebreus TPSY]
gi|221731378|gb|ACM34198.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax ebreus TPSY]
Length = 211
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
L+ LL G + VPTD+ YA+VC L A++R+RRI+ + L++LCR L ++
Sbjct: 17 LKQAATLLSSGGILAVPTDSSYALVCRLDDKDAVDRIRRIRQINDKHHLTLLCRDLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
Y R +R +K PGPYTFIL A+KEVP++ + RK +G
Sbjct: 77 NYAHVDNRQ--------YRLLKLATPGPYTFILDATKEVPRRV--------SHPQRKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P+ Q +L+ APL++T++ ++E + DP I + + + LD ++D G
Sbjct: 121 LRVPDRKGLQMLLELHGAPLLATTLIPAGESEPLNDPQEIRERFEKQ-LDGILDAGGCPL 179
Query: 195 EPSTVVDM----TGTYPKIIRQGKG 215
EP+TV+D+ TG P ++R+G G
Sbjct: 180 EPTTVLDLTPMNTGGDPIVVREGGG 204
>gi|392421654|ref|YP_006458258.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri CCUG
29243]
gi|390983842|gb|AFM33835.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri CCUG
29243]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAVGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTAAFRLLKAHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ ++ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLEELGEPLMSVSLILPGEDLPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV + P++IR G G
Sbjct: 168 -VDLIIDGGYGGLEASTVVSLVDDRPEVIRVGCG 200
>gi|146282789|ref|YP_001172942.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri A1501]
gi|386021155|ref|YP_005939179.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri DSM 4166]
gi|145570994|gb|ABP80100.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri A1501]
gi|327481127|gb|AEA84437.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri DSM 4166]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YAI C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAIGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT ILTA++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLF--------AKVDTAAFRLLKAHLPGPYTIILTATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ ++ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPALPIAQALLEELGEPLMSVSLILPGEDLPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV + P+++R G G
Sbjct: 168 -VDLIIDGGYGGLEASTVVSLVDDQPEVVRVGCG 200
>gi|255318610|ref|ZP_05359841.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter radioresistens
SK82]
gi|262379163|ref|ZP_06072319.1| yrdC domain-containing protein [Acinetobacter radioresistens SH164]
gi|421465532|ref|ZP_15914219.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter radioresistens
WC-A-157]
gi|421856958|ref|ZP_16289315.1| hypothetical protein ACRAD_30_00160 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255304292|gb|EET83478.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter radioresistens
SK82]
gi|262298620|gb|EEY86533.1| yrdC domain-containing protein [Acinetobacter radioresistens SH164]
gi|400203799|gb|EJO34784.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter radioresistens
WC-A-157]
gi|403187559|dbj|GAB75516.1| hypothetical protein ACRAD_30_00160 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 205
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLRVHPENPQPRLITQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCSDLSDIATY--------AKVDNAMYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++ ICQ +LQ++ PL+++++ + + DP I G
Sbjct: 112 ------HPKRKTIGLRIPSNPICQMLLQELGEPLLTSTLILPGQEDPLDDPYEIEQQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG + +++VD++G P+IIR G+G
Sbjct: 165 KRIDVFIDGGFGMLSTTSIVDLSGENPEIIRYGEG 199
>gi|326335637|ref|ZP_08201824.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692403|gb|EGD34355.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 123/217 (56%), Gaps = 22/217 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + +++ VV+ L+EG V + PTDT+Y + CD+ A+ER+ ++K ++ K
Sbjct: 4 FIKIYPENPNEREVQKVVDCLREGGVIIYPTDTVYGLGCDITHSKALERIAQLKGIKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPG YTFIL + +PK
Sbjct: 64 ANFSFVCADLSNLSDYVK-------QIDTATFKILKRALPGAYTFILPGNTNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTY 178
++ +K VG+R+P++ I + +++K+ P++S+S+ + +D E+ DP +I + +
Sbjct: 112 -----EFKKKKTVGIRVPDNNIARILVKKLGNPIVSSSI-YDEDEVIEYTTDPELIFEKW 165
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+DGG STV+D++ P++IR+GKG
Sbjct: 166 -QDKVDMVIDGGYGDNVASTVIDLSTRVPELIREGKG 201
>gi|297196275|ref|ZP_06913673.1| translation factor SUA5 [Streptomyces pristinaespiralis ATCC 25486]
gi|297153146|gb|EDY66899.2| translation factor SUA5 [Streptomyces pristinaespiralis ATCC 25486]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + V + ++ GA+ PTD+ +A+ C L S I R+R I+N++
Sbjct: 4 YFDVHPENPQRRTISTVADSIRSGALVAYPTDSCFALGCRLGSRDGIGRIRSIRNLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C++ + + Q ++FRA+K PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCQNFAQLGQFV--------QVDNDVFRAIKAATPGSYTFILPATKEVPRQLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRIP+ + QA++ ++ PL+S+++ ++E M I +
Sbjct: 113 -----HPKKKTVGVRIPDHVVAQALVAELGEPLLSSTLLMPDEDEPMTQGWEIKERLD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVD G EP+TV+D +G P+I+R+G G
Sbjct: 167 VVDAVVDSGDCGTEPTTVIDFSGAEPEIVRRGAG 200
>gi|408370119|ref|ZP_11167898.1| Sua5/YciO/YrdC/YwlC family protein [Galbibacter sp. ck-I2-15]
gi|407744594|gb|EKF56162.1| Sua5/YciO/YrdC/YwlC family protein [Galbibacter sp. ck-I2-15]
Length = 207
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 117/205 (57%), Gaps = 22/205 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
++E VV +L+ G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L +
Sbjct: 16 EIEKVVSVLRNGGLVIYPTDTVYGLGCDITNTKALEKIARIKGVKLEKANFSFICADLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL S ++PK + ++
Sbjct: 76 LSDYVK-------QIDTATFKILKRALPGPYTFILPGSNKLPK----------VFKKKRT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGG 190
VG+R+P+++I +++QK+ P++STS+ + +D E+ DP +I + + + V+DGG
Sbjct: 119 VGIRVPDNSIALSLVQKLGNPIVSTSI-YDEDELIEYTTDPELIHEKWD-NLVSIVIDGG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++ P +IR+GKG
Sbjct: 177 YGDNVASTVIDLSQATPTVIRKGKG 201
>gi|110641496|ref|YP_669226.1| hypothetical protein ECP_1314 [Escherichia coli 536]
gi|157155810|ref|YP_001462564.1| hypothetical protein EcE24377A_1466 [Escherichia coli E24377A]
gi|157160772|ref|YP_001458090.1| hypothetical protein EcHS_A1376 [Escherichia coli HS]
gi|162135901|ref|NP_415783.6| predicted RNA binding protein [Escherichia coli str. K-12 substr.
MG1655]
gi|168758351|ref|ZP_02783358.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4401]
gi|170020369|ref|YP_001725323.1| hypothetical protein EcolC_2361 [Escherichia coli ATCC 8739]
gi|170080944|ref|YP_001730264.1| hypothetical protein ECDH10B_1382 [Escherichia coli str. K-12
substr. DH10B]
gi|187733520|ref|YP_001880097.1| hypothetical protein SbBS512_E1491 [Shigella boydii CDC 3083-94]
gi|188495376|ref|ZP_03002646.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 53638]
gi|191166644|ref|ZP_03028472.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B7A]
gi|193069999|ref|ZP_03050947.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E110019]
gi|194435054|ref|ZP_03067293.1| Sua5/YciO/YrdC/YwlC family protein [Shigella dysenteriae 1012]
gi|195939200|ref|ZP_03084582.1| hypothetical protein EscherichcoliO157_22736 [Escherichia coli
O157:H7 str. EC4024]
gi|209918507|ref|YP_002292591.1| hypothetical protein ECSE_1316 [Escherichia coli SE11]
gi|215486562|ref|YP_002328993.1| hypothetical protein E2348C_1457 [Escherichia coli O127:H6 str.
E2348/69]
gi|218549042|ref|YP_002382833.1| hypothetical protein EFER_1690 [Escherichia fergusonii ATCC 35469]
gi|218553819|ref|YP_002386732.1| hypothetical protein ECIAI1_1286 [Escherichia coli IAI1]
gi|218558252|ref|YP_002391165.1| hypothetical protein ECS88_1401 [Escherichia coli S88]
gi|218689257|ref|YP_002397469.1| hypothetical protein ECED1_1473 [Escherichia coli ED1a]
gi|218694838|ref|YP_002402505.1| hypothetical protein EC55989_1424 [Escherichia coli 55989]
gi|218699974|ref|YP_002407603.1| hypothetical protein ECIAI39_1603 [Escherichia coli IAI39]
gi|218704790|ref|YP_002412309.1| hypothetical protein ECUMN_1565 [Escherichia coli UMN026]
gi|222156066|ref|YP_002556205.1| hypothetical protein LF82_2759 [Escherichia coli LF82]
gi|238900500|ref|YP_002926296.1| hypothetical protein BWG_1096 [Escherichia coli BW2952]
gi|251784771|ref|YP_002999075.1| hypothetical protein B21_01251 [Escherichia coli BL21(DE3)]
gi|253773736|ref|YP_003036567.1| hypothetical protein ECBD_2356 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161346|ref|YP_003044454.1| hypothetical protein ECB_01241 [Escherichia coli B str. REL606]
gi|254288154|ref|YP_003053902.1| hypothetical protein ECD_01241 [Escherichia coli BL21(DE3)]
gi|254792855|ref|YP_003077692.1| hypothetical protein ECSP_1785 [Escherichia coli O157:H7 str.
TW14359]
gi|260843615|ref|YP_003221393.1| hypothetical protein ECO103_1429 [Escherichia coli O103:H2 str.
12009]
gi|260867716|ref|YP_003234118.1| hypothetical protein ECO111_1647 [Escherichia coli O111:H- str.
11128]
gi|261224249|ref|ZP_05938530.1| hypothetical protein EscherichiacoliO157_06545 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257495|ref|ZP_05950028.1| hypothetical protein EscherichiacoliO157EcO_16982 [Escherichia coli
O157:H7 str. FRIK966]
gi|293404808|ref|ZP_06648800.1| hypothetical protein ECGG_00131 [Escherichia coli FVEC1412]
gi|293409651|ref|ZP_06653227.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B354]
gi|293414599|ref|ZP_06657248.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B185]
gi|293433628|ref|ZP_06662056.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B088]
gi|298380449|ref|ZP_06990048.1| hypothetical protein ECFG_00142 [Escherichia coli FVEC1302]
gi|300820148|ref|ZP_07100317.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 107-1]
gi|300822570|ref|ZP_07102709.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 119-7]
gi|300896125|ref|ZP_07114679.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 198-1]
gi|300904136|ref|ZP_07122009.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 84-1]
gi|300919447|ref|ZP_07135948.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 115-1]
gi|300926648|ref|ZP_07142425.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 182-1]
gi|300927773|ref|ZP_07143337.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 187-1]
gi|300940070|ref|ZP_07154680.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 21-1]
gi|300951923|ref|ZP_07165727.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 116-1]
gi|300955868|ref|ZP_07168207.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 175-1]
gi|300971790|ref|ZP_07171624.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 200-1]
gi|300982414|ref|ZP_07176111.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 45-1]
gi|301019491|ref|ZP_07183660.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 69-1]
gi|301046929|ref|ZP_07194043.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 185-1]
gi|301304782|ref|ZP_07210888.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 124-1]
gi|301327009|ref|ZP_07220296.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 78-1]
gi|301647239|ref|ZP_07247058.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 146-1]
gi|306813710|ref|ZP_07447891.1| hypothetical protein ECNC101_17397 [Escherichia coli NC101]
gi|307309979|ref|ZP_07589629.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli W]
gi|309793260|ref|ZP_07687687.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 145-7]
gi|312966805|ref|ZP_07781023.1| yrdC domain protein [Escherichia coli 2362-75]
gi|331657314|ref|ZP_08358276.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA206]
gi|331662678|ref|ZP_08363601.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA143]
gi|331682752|ref|ZP_08383371.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H299]
gi|378713358|ref|YP_005278251.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KO11FL]
gi|383178749|ref|YP_005456754.1| hypothetical protein SSON53_11080 [Shigella sonnei 53G]
gi|386280384|ref|ZP_10058050.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia sp. 4_1_40B]
gi|386595914|ref|YP_006092314.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli DH1]
gi|386599167|ref|YP_006100673.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli IHE3034]
gi|386604675|ref|YP_006110975.1| hypothetical protein UM146_10450 [Escherichia coli UM146]
gi|386608601|ref|YP_006124087.1| hypothetical protein ECW_m1359 [Escherichia coli W]
gi|386613690|ref|YP_006133356.1| hypothetical protein UMNK88_1596 [Escherichia coli UMNK88]
gi|386618973|ref|YP_006138553.1| hypothetical protein ECNA114_1454 [Escherichia coli NA114]
gi|386638833|ref|YP_006105631.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli ABU 83972]
gi|386701782|ref|YP_006165619.1| hypothetical protein KO11_16495 [Escherichia coli KO11FL]
gi|386709054|ref|YP_006172775.1| hypothetical protein WFL_06620 [Escherichia coli W]
gi|387506457|ref|YP_006158713.1| hypothetical protein ECO55CA74_07810 [Escherichia coli O55:H7 str.
RM12579]
gi|387611829|ref|YP_006114945.1| hypothetical protein ETEC_1369 [Escherichia coli ETEC H10407]
gi|387616640|ref|YP_006119662.1| hypothetical protein NRG857_06500 [Escherichia coli O83:H1 str. NRG
857C]
gi|387620980|ref|YP_006128607.1| hypothetical protein ECDH1ME8569_1206 [Escherichia coli DH1]
gi|387829298|ref|YP_003349235.1| hypothetical protein ECSF_1245 [Escherichia coli SE15]
gi|388477347|ref|YP_489535.1| hypothetical protein Y75_p1241 [Escherichia coli str. K-12 substr.
W3110]
gi|404374629|ref|ZP_10979837.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia sp. 1_1_43]
gi|407468997|ref|YP_006784561.1| hypothetical protein O3O_11615 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482340|ref|YP_006779489.1| hypothetical protein O3K_14015 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410482892|ref|YP_006770438.1| hypothetical protein O3M_13990 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414576300|ref|ZP_11433488.1| hypothetical protein SS323385_2132 [Shigella sonnei 3233-85]
gi|415772281|ref|ZP_11485679.1| yrdC domain protein [Escherichia coli 3431]
gi|415796725|ref|ZP_11497756.1| yrdC domain protein [Escherichia coli E128010]
gi|415812521|ref|ZP_11504658.1| yrdC domain protein [Escherichia coli LT-68]
gi|415819359|ref|ZP_11508802.1| yrdC domain protein [Escherichia coli OK1180]
gi|415827096|ref|ZP_11514013.1| yrdC domain protein [Escherichia coli OK1357]
gi|415845080|ref|ZP_11524723.1| yrdC domain protein [Shigella sonnei 53G]
gi|415856084|ref|ZP_11531136.1| yrdC domain protein [Shigella flexneri 2a str. 2457T]
gi|415864423|ref|ZP_11537493.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 85-1]
gi|415876152|ref|ZP_11542688.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 79-10]
gi|416280775|ref|ZP_11645545.1| YciO family [Shigella boydii ATCC 9905]
gi|416320763|ref|ZP_11663162.1| YciO family [Escherichia coli O157:H7 str. EC1212]
gi|416329167|ref|ZP_11668670.1| YciO family [Escherichia coli O157:H7 str. 1125]
gi|416782730|ref|ZP_11877937.1| hypothetical protein ECO5101_20125 [Escherichia coli O157:H7 str.
G5101]
gi|416794016|ref|ZP_11882853.1| hypothetical protein ECO9389_21424 [Escherichia coli O157:H- str.
493-89]
gi|416805664|ref|ZP_11887708.1| hypothetical protein ECO2687_09354 [Escherichia coli O157:H- str. H
2687]
gi|416816524|ref|ZP_11892423.1| hypothetical protein ECO7815_06412 [Escherichia coli O55:H7 str.
3256-97]
gi|416826027|ref|ZP_11897020.1| hypothetical protein ECO5905_15803 [Escherichia coli O55:H7 str.
USDA 5905]
gi|416837190|ref|ZP_11902278.1| hypothetical protein ECOSU61_13093 [Escherichia coli O157:H7 str.
LSU-61]
gi|417126314|ref|ZP_11974039.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 97.0246]
gi|417151070|ref|ZP_11990809.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 1.2264]
gi|417204750|ref|ZP_12018932.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli JB1-95]
gi|417240191|ref|ZP_12036627.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 9.0111]
gi|417580849|ref|ZP_12231656.1| yrdC domain protein [Escherichia coli STEC_B2F1]
gi|417586200|ref|ZP_12236973.1| yrdC domain protein [Escherichia coli STEC_C165-02]
gi|417591257|ref|ZP_12241962.1| yrdC domain protein [Escherichia coli 2534-86]
gi|417596362|ref|ZP_12247015.1| yrdC domain protein [Escherichia coli 3030-1]
gi|417602095|ref|ZP_12252668.1| yrdC domain protein [Escherichia coli STEC_94C]
gi|417607914|ref|ZP_12258423.1| yrdC domain protein [Escherichia coli STEC_DG131-3]
gi|417612638|ref|ZP_12263102.1| yrdC domain protein [Escherichia coli STEC_EH250]
gi|417617799|ref|ZP_12268225.1| yrdC domain protein [Escherichia coli G58-1]
gi|417623195|ref|ZP_12273503.1| yrdC domain protein [Escherichia coli STEC_H.1.8]
gi|417628602|ref|ZP_12278843.1| yrdC domain protein [Escherichia coli STEC_MHI813]
gi|417634251|ref|ZP_12284466.1| yrdC domain protein [Escherichia coli STEC_S1191]
gi|417638624|ref|ZP_12288783.1| yrdC domain protein [Escherichia coli TX1999]
gi|417666528|ref|ZP_12316083.1| yrdC domain protein [Escherichia coli STEC_O31]
gi|417670741|ref|ZP_12320243.1| yrdC domain protein [Shigella dysenteriae 155-74]
gi|417682356|ref|ZP_12331713.1| yrdC domain protein [Shigella boydii 3594-74]
gi|417689193|ref|ZP_12338428.1| yrdC domain protein [Shigella boydii 5216-82]
gi|417701682|ref|ZP_12350807.1| yrdC domain protein [Shigella flexneri K-218]
gi|417707275|ref|ZP_12356323.1| yrdC domain protein [Shigella flexneri VA-6]
gi|417722597|ref|ZP_12371420.1| yrdC domain protein [Shigella flexneri K-304]
gi|417727930|ref|ZP_12376656.1| yrdC domain protein [Shigella flexneri K-671]
gi|417732948|ref|ZP_12381611.1| yrdC domain protein [Shigella flexneri 2747-71]
gi|417738277|ref|ZP_12386870.1| yrdC domain protein [Shigella flexneri 4343-70]
gi|417742922|ref|ZP_12391464.1| yrdC domain protein [Shigella flexneri 2930-71]
gi|417755297|ref|ZP_12403386.1| yrdC domain protein [Escherichia coli DEC2B]
gi|417804784|ref|ZP_12451762.1| hypothetical protein HUSEC_07407 [Escherichia coli O104:H4 str.
LB226692]
gi|417827427|ref|ZP_12473996.1| yrdC domain protein [Shigella flexneri J1713]
gi|417832519|ref|ZP_12478985.1| hypothetical protein HUSEC41_07117 [Escherichia coli O104:H4 str.
01-09591]
gi|417868014|ref|ZP_12513046.1| hypothetical protein C22711_4938 [Escherichia coli O104:H4 str.
C227-11]
gi|417944383|ref|ZP_12587626.1| hypothetical protein IAE_05290 [Escherichia coli XH140A]
gi|417976137|ref|ZP_12616932.1| hypothetical protein IAM_07408 [Escherichia coli XH001]
gi|418043453|ref|ZP_12681614.1| hypothetical protein ECW26_38450 [Escherichia coli W26]
gi|418255290|ref|ZP_12879705.1| yrdC domain protein [Shigella flexneri 6603-63]
gi|418265937|ref|ZP_12885646.1| yrdC domain protein [Shigella sonnei str. Moseley]
gi|418302499|ref|ZP_12914293.1| yrdC domain protein [Escherichia coli UMNF18]
gi|418945058|ref|ZP_13497996.1| hypothetical protein T22_18463 [Escherichia coli O157:H43 str. T22]
gi|418958397|ref|ZP_13510314.1| hypothetical protein OQE_25580 [Escherichia coli J53]
gi|418996456|ref|ZP_13544059.1| yrdC domain protein [Escherichia coli DEC1A]
gi|419001688|ref|ZP_13549231.1| yrdC domain protein [Escherichia coli DEC1B]
gi|419007176|ref|ZP_13554622.1| yrdC domain protein [Escherichia coli DEC1C]
gi|419013092|ref|ZP_13560451.1| hypothetical protein ECDEC1D_1942 [Escherichia coli DEC1D]
gi|419017912|ref|ZP_13565229.1| yrdC domain protein [Escherichia coli DEC1E]
gi|419023568|ref|ZP_13570804.1| hypothetical protein ECDEC2A_1699 [Escherichia coli DEC2A]
gi|419028454|ref|ZP_13575637.1| yrdC domain protein [Escherichia coli DEC2C]
gi|419034216|ref|ZP_13581310.1| yrdC domain protein [Escherichia coli DEC2D]
gi|419039213|ref|ZP_13586260.1| yrdC domain protein [Escherichia coli DEC2E]
gi|419045200|ref|ZP_13592149.1| yrdC domain protein [Escherichia coli DEC3A]
gi|419051000|ref|ZP_13597885.1| yrdC domain protein [Escherichia coli DEC3B]
gi|419057022|ref|ZP_13603846.1| yrdC domain protein [Escherichia coli DEC3C]
gi|419062403|ref|ZP_13609149.1| yrdC domain protein [Escherichia coli DEC3D]
gi|419069289|ref|ZP_13614972.1| yrdC domain protein [Escherichia coli DEC3E]
gi|419075218|ref|ZP_13620755.1| yrdC domain protein [Escherichia coli DEC3F]
gi|419080354|ref|ZP_13625820.1| yrdC domain protein [Escherichia coli DEC4A]
gi|419086145|ref|ZP_13631522.1| yrdC domain protein [Escherichia coli DEC4B]
gi|419092286|ref|ZP_13637583.1| yrdC domain protein [Escherichia coli DEC4C]
gi|419097996|ref|ZP_13643213.1| yrdC domain protein [Escherichia coli DEC4D]
gi|419103797|ref|ZP_13648944.1| yrdC domain protein [Escherichia coli DEC4E]
gi|419109335|ref|ZP_13654408.1| yrdC domain protein [Escherichia coli DEC4F]
gi|419114300|ref|ZP_13659329.1| yrdC domain protein [Escherichia coli DEC5A]
gi|419119991|ref|ZP_13664962.1| yrdC domain protein [Escherichia coli DEC5B]
gi|419125860|ref|ZP_13670751.1| yrdC domain protein [Escherichia coli DEC5C]
gi|419131158|ref|ZP_13676004.1| yrdC domain protein [Escherichia coli DEC5D]
gi|419136051|ref|ZP_13680853.1| hypothetical protein ECDEC5E_1544 [Escherichia coli DEC5E]
gi|419141917|ref|ZP_13686664.1| hypothetical protein ECDEC6A_1558 [Escherichia coli DEC6A]
gi|419147987|ref|ZP_13692669.1| yrdC domain protein [Escherichia coli DEC6B]
gi|419153244|ref|ZP_13697824.1| hypothetical protein ECDEC6C_1410 [Escherichia coli DEC6C]
gi|419158694|ref|ZP_13703207.1| hypothetical protein ECDEC6D_1501 [Escherichia coli DEC6D]
gi|419163784|ref|ZP_13708246.1| yrdC domain protein [Escherichia coli DEC6E]
gi|419169304|ref|ZP_13713697.1| hypothetical protein ECDEC7A_1457 [Escherichia coli DEC7A]
gi|419174709|ref|ZP_13718558.1| yrdC domain protein [Escherichia coli DEC7B]
gi|419180330|ref|ZP_13723951.1| yrdC domain protein [Escherichia coli DEC7C]
gi|419185844|ref|ZP_13729365.1| yrdC domain protein [Escherichia coli DEC7D]
gi|419191115|ref|ZP_13734581.1| hypothetical protein ECDEC7E_1396 [Escherichia coli DEC7E]
gi|419196522|ref|ZP_13739920.1| hypothetical protein ECDEC8A_1624 [Escherichia coli DEC8A]
gi|419203013|ref|ZP_13746219.1| yrdC domain protein [Escherichia coli DEC8B]
gi|419220860|ref|ZP_13763801.1| yrdC domain protein [Escherichia coli DEC8E]
gi|419226257|ref|ZP_13769128.1| yrdC domain protein [Escherichia coli DEC9A]
gi|419231927|ref|ZP_13774712.1| yrdC domain protein [Escherichia coli DEC9B]
gi|419237326|ref|ZP_13780058.1| yrdC domain protein [Escherichia coli DEC9C]
gi|419242838|ref|ZP_13785483.1| yrdC domain protein [Escherichia coli DEC9D]
gi|419248589|ref|ZP_13791185.1| yrdC domain protein [Escherichia coli DEC9E]
gi|419277540|ref|ZP_13819801.1| yrdC domain protein [Escherichia coli DEC10E]
gi|419283572|ref|ZP_13825766.1| yrdC domain protein [Escherichia coli DEC10F]
gi|419289103|ref|ZP_13831202.1| yrdC domain protein [Escherichia coli DEC11A]
gi|419294367|ref|ZP_13836415.1| yrdC domain protein [Escherichia coli DEC11B]
gi|419299774|ref|ZP_13841780.1| hypothetical protein ECDEC11C_1650 [Escherichia coli DEC11C]
gi|419305905|ref|ZP_13847813.1| hypothetical protein ECDEC11D_1471 [Escherichia coli DEC11D]
gi|419310992|ref|ZP_13852862.1| hypothetical protein ECDEC11E_1524 [Escherichia coli DEC11E]
gi|419316248|ref|ZP_13858068.1| hypothetical protein ECDEC12A_1553 [Escherichia coli DEC12A]
gi|419322257|ref|ZP_13863980.1| yrdC domain protein [Escherichia coli DEC12B]
gi|419328333|ref|ZP_13869959.1| hypothetical protein ECDEC12C_1543 [Escherichia coli DEC12C]
gi|419333999|ref|ZP_13875543.1| yrdC domain protein [Escherichia coli DEC12D]
gi|419339201|ref|ZP_13880684.1| yrdC domain protein [Escherichia coli DEC12E]
gi|419344955|ref|ZP_13886337.1| yrdC domain protein [Escherichia coli DEC13A]
gi|419349388|ref|ZP_13890740.1| yrdC domain protein [Escherichia coli DEC13B]
gi|419354560|ref|ZP_13895832.1| yrdC domain protein [Escherichia coli DEC13C]
gi|419359784|ref|ZP_13901008.1| yrdC domain protein [Escherichia coli DEC13D]
gi|419364852|ref|ZP_13906023.1| yrdC domain protein [Escherichia coli DEC13E]
gi|419369580|ref|ZP_13910706.1| hypothetical protein ECDEC14A_1325 [Escherichia coli DEC14A]
gi|419380331|ref|ZP_13921296.1| yrdC domain protein [Escherichia coli DEC14C]
gi|419385668|ref|ZP_13926554.1| yrdC domain protein [Escherichia coli DEC14D]
gi|419391088|ref|ZP_13931910.1| yrdC domain protein [Escherichia coli DEC15A]
gi|419396124|ref|ZP_13936903.1| yrdC domain protein [Escherichia coli DEC15B]
gi|419401505|ref|ZP_13942232.1| yrdC domain protein [Escherichia coli DEC15C]
gi|419406692|ref|ZP_13947384.1| yrdC domain protein [Escherichia coli DEC15D]
gi|419412194|ref|ZP_13952857.1| yrdC domain protein [Escherichia coli DEC15E]
gi|419700161|ref|ZP_14227770.1| hypothetical protein OQA_06381 [Escherichia coli SCI-07]
gi|419803854|ref|ZP_14329020.1| hypothetical protein ECAI27_06510 [Escherichia coli AI27]
gi|419811369|ref|ZP_14336244.1| hypothetical protein UWO_12682 [Escherichia coli O32:H37 str. P4]
gi|419866506|ref|ZP_14388866.1| hypothetical protein ECO9340_08628 [Escherichia coli O103:H25 str.
CVM9340]
gi|419871948|ref|ZP_14393996.1| hypothetical protein ECO9450_25261 [Escherichia coli O103:H2 str.
CVM9450]
gi|419891073|ref|ZP_14411225.1| hypothetical protein ECO9570_02239 [Escherichia coli O111:H8 str.
CVM9570]
gi|419897762|ref|ZP_14417340.1| hypothetical protein ECO9574_13791 [Escherichia coli O111:H8 str.
CVM9574]
gi|419914963|ref|ZP_14433341.1| hypothetical protein ECKD1_17336 [Escherichia coli KD1]
gi|419918397|ref|ZP_14436599.1| hypothetical protein ECKD2_10411 [Escherichia coli KD2]
gi|419924783|ref|ZP_14442654.1| hypothetical protein EC54115_17127 [Escherichia coli 541-15]
gi|419928281|ref|ZP_14445997.1| hypothetical protein EC5411_08693 [Escherichia coli 541-1]
gi|419936635|ref|ZP_14453627.1| hypothetical protein EC5761_22455 [Escherichia coli 576-1]
gi|419940564|ref|ZP_14457295.1| hypothetical protein EC75_14720 [Escherichia coli 75]
gi|419951689|ref|ZP_14467874.1| hypothetical protein ECMT8_19969 [Escherichia coli CUMT8]
gi|420087731|ref|ZP_14599679.1| hypothetical protein ECO9602_06909 [Escherichia coli O111:H8 str.
CVM9602]
gi|420098402|ref|ZP_14609672.1| hypothetical protein ECO9634_24028 [Escherichia coli O111:H8 str.
CVM9634]
gi|420269071|ref|ZP_14771454.1| hypothetical protein ECPA22_2009 [Escherichia coli PA22]
gi|420274918|ref|ZP_14777228.1| hypothetical protein ECPA40_2162 [Escherichia coli PA40]
gi|420279945|ref|ZP_14782200.1| hypothetical protein ECTW06591_1497 [Escherichia coli TW06591]
gi|420286150|ref|ZP_14788353.1| hypothetical protein ECTW10246_1991 [Escherichia coli TW10246]
gi|420291958|ref|ZP_14794097.1| hypothetical protein ECTW11039_2085 [Escherichia coli TW11039]
gi|420297651|ref|ZP_14799720.1| hypothetical protein ECTW09109_2109 [Escherichia coli TW09109]
gi|420303749|ref|ZP_14805761.1| hypothetical protein ECTW10119_2405 [Escherichia coli TW10119]
gi|420309312|ref|ZP_14811263.1| hypothetical protein ECEC1738_2027 [Escherichia coli EC1738]
gi|420314693|ref|ZP_14816582.1| hypothetical protein ECEC1734_1770 [Escherichia coli EC1734]
gi|420319898|ref|ZP_14821740.1| hypothetical protein SF285071_1518 [Shigella flexneri 2850-71]
gi|420325035|ref|ZP_14826807.1| hypothetical protein SFCCH060_1364 [Shigella flexneri CCH060]
gi|420330782|ref|ZP_14832463.1| hypothetical protein SFK1770_1929 [Shigella flexneri K-1770]
gi|420346508|ref|ZP_14847924.1| hypothetical protein SB96558_1459 [Shigella boydii 965-58]
gi|420352208|ref|ZP_14853360.1| hypothetical protein SB444474_1298 [Shigella boydii 4444-74]
gi|420363544|ref|ZP_14864435.1| yrdC domain protein [Shigella sonnei 4822-66]
gi|420379993|ref|ZP_14879464.1| hypothetical protein SD22575_1781 [Shigella dysenteriae 225-75]
gi|420385175|ref|ZP_14884543.1| hypothetical protein ECEPECA12_1543 [Escherichia coli EPECa12]
gi|420390854|ref|ZP_14890118.1| yrdC domain protein [Escherichia coli EPEC C342-62]
gi|421682004|ref|ZP_16121823.1| yrdC domain protein [Shigella flexneri 1485-80]
gi|421811865|ref|ZP_16247626.1| hypothetical protein EC80416_1658 [Escherichia coli 8.0416]
gi|421817926|ref|ZP_16253455.1| hypothetical protein EC100821_1824 [Escherichia coli 10.0821]
gi|421823588|ref|ZP_16258993.1| hypothetical protein ECFRIK920_2009 [Escherichia coli FRIK920]
gi|421830369|ref|ZP_16265676.1| hypothetical protein ECPA7_2517 [Escherichia coli PA7]
gi|422334546|ref|ZP_16415552.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4_1_47FAA]
gi|422353051|ref|ZP_16433817.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 117-3]
gi|422357025|ref|ZP_16437696.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 110-3]
gi|422362487|ref|ZP_16443053.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 153-1]
gi|422370984|ref|ZP_16451369.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 16-3]
gi|422377423|ref|ZP_16457664.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 60-1]
gi|422382694|ref|ZP_16462849.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 57-2]
gi|422752313|ref|ZP_16806216.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H252]
gi|422757752|ref|ZP_16811568.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H263]
gi|422762692|ref|ZP_16816448.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E1167]
gi|422765815|ref|ZP_16819542.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E1520]
gi|422770481|ref|ZP_16824172.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E482]
gi|422774871|ref|ZP_16828527.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H120]
gi|422785876|ref|ZP_16838615.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H489]
gi|422790058|ref|ZP_16842763.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA007]
gi|422805414|ref|ZP_16853846.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia fergusonii B253]
gi|422817415|ref|ZP_16865629.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M919]
gi|422830485|ref|ZP_16878642.1| hypothetical protein ESNG_03147 [Escherichia coli B093]
gi|422834904|ref|ZP_16882963.1| hypothetical protein ESOG_02564 [Escherichia coli E101]
gi|422838709|ref|ZP_16886682.1| hypothetical protein ESPG_01368 [Escherichia coli H397]
gi|422958571|ref|ZP_16970502.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H494]
gi|422975881|ref|ZP_16976875.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA124]
gi|422987253|ref|ZP_16978029.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
C227-11]
gi|422994134|ref|ZP_16984898.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
C236-11]
gi|422999325|ref|ZP_16990081.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
09-7901]
gi|423002926|ref|ZP_16993672.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
04-8351]
gi|423009447|ref|ZP_17000185.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-3677]
gi|423023640|ref|ZP_17014343.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4404]
gi|423028789|ref|ZP_17019482.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4522]
gi|423029656|ref|ZP_17020344.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4623]
gi|423037495|ref|ZP_17028169.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423042609|ref|ZP_17033276.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423049301|ref|ZP_17039958.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423052882|ref|ZP_17041690.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423059848|ref|ZP_17048644.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423700241|ref|ZP_17674729.1| hypothetical protein ECPA31_1880 [Escherichia coli PA31]
gi|423709314|ref|ZP_17683692.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B799]
gi|424076937|ref|ZP_17814075.1| hypothetical protein ECFDA505_1980 [Escherichia coli FDA505]
gi|424083285|ref|ZP_17819929.1| hypothetical protein ECFDA517_2200 [Escherichia coli FDA517]
gi|424089805|ref|ZP_17825886.1| hypothetical protein ECFRIK1996_2056 [Escherichia coli FRIK1996]
gi|424096202|ref|ZP_17831711.1| hypothetical protein ECFRIK1985_2072 [Escherichia coli FRIK1985]
gi|424102589|ref|ZP_17837522.1| hypothetical protein ECFRIK1990_2085 [Escherichia coli FRIK1990]
gi|424109361|ref|ZP_17843740.1| hypothetical protein EC93001_2151 [Escherichia coli 93-001]
gi|424115077|ref|ZP_17849060.1| hypothetical protein ECPA3_1928 [Escherichia coli PA3]
gi|424121374|ref|ZP_17854870.1| hypothetical protein ECPA5_1943 [Escherichia coli PA5]
gi|424127559|ref|ZP_17860588.1| hypothetical protein ECPA9_2099 [Escherichia coli PA9]
gi|424133683|ref|ZP_17866294.1| hypothetical protein ECPA10_2067 [Escherichia coli PA10]
gi|424140321|ref|ZP_17872381.1| hypothetical protein ECPA14_2040 [Escherichia coli PA14]
gi|424146768|ref|ZP_17878301.1| hypothetical protein ECPA15_2179 [Escherichia coli PA15]
gi|424152773|ref|ZP_17883835.1| hypothetical protein ECPA24_1907 [Escherichia coli PA24]
gi|424226584|ref|ZP_17889327.1| hypothetical protein ECPA25_1818 [Escherichia coli PA25]
gi|424302822|ref|ZP_17895182.1| hypothetical protein ECPA28_2104 [Escherichia coli PA28]
gi|424442667|ref|ZP_17900954.1| hypothetical protein ECPA32_1981 [Escherichia coli PA32]
gi|424455270|ref|ZP_17906585.1| hypothetical protein ECPA33_1986 [Escherichia coli PA33]
gi|424461608|ref|ZP_17912273.1| hypothetical protein ECPA39_2013 [Escherichia coli PA39]
gi|424468046|ref|ZP_17918024.1| hypothetical protein ECPA41_2042 [Escherichia coli PA41]
gi|424474594|ref|ZP_17924066.1| hypothetical protein ECPA42_2152 [Escherichia coli PA42]
gi|424480436|ref|ZP_17929518.1| hypothetical protein ECTW07945_2031 [Escherichia coli TW07945]
gi|424486566|ref|ZP_17935247.1| hypothetical protein ECTW09098_2072 [Escherichia coli TW09098]
gi|424492878|ref|ZP_17940910.1| hypothetical protein ECTW09195_2046 [Escherichia coli TW09195]
gi|424499817|ref|ZP_17946880.1| hypothetical protein ECEC4203_2007 [Escherichia coli EC4203]
gi|424505995|ref|ZP_17952556.1| hypothetical protein ECEC4196_1968 [Escherichia coli EC4196]
gi|424512327|ref|ZP_17958315.1| hypothetical protein ECTW14313_1961 [Escherichia coli TW14313]
gi|424519756|ref|ZP_17964012.1| hypothetical protein ECTW14301_1900 [Escherichia coli TW14301]
gi|424525680|ref|ZP_17969517.1| hypothetical protein ECEC4421_1990 [Escherichia coli EC4421]
gi|424531854|ref|ZP_17975308.1| hypothetical protein ECEC4422_2123 [Escherichia coli EC4422]
gi|424537852|ref|ZP_17980918.1| hypothetical protein ECEC4013_2215 [Escherichia coli EC4013]
gi|424543783|ref|ZP_17986375.1| hypothetical protein ECEC4402_1983 [Escherichia coli EC4402]
gi|424550068|ref|ZP_17992070.1| hypothetical protein ECEC4439_1948 [Escherichia coli EC4439]
gi|424556311|ref|ZP_17997841.1| hypothetical protein ECEC4436_1924 [Escherichia coli EC4436]
gi|424562659|ref|ZP_18003768.1| hypothetical protein ECEC4437_2072 [Escherichia coli EC4437]
gi|424568723|ref|ZP_18009437.1| hypothetical protein ECEC4448_1971 [Escherichia coli EC4448]
gi|424574861|ref|ZP_18015092.1| hypothetical protein ECEC1845_1925 [Escherichia coli EC1845]
gi|424580770|ref|ZP_18020537.1| hypothetical protein ECEC1863_1701 [Escherichia coli EC1863]
gi|424770651|ref|ZP_18197846.1| hypothetical protein CFSAN001632_11224 [Escherichia coli O111:H8
str. CFSAN001632]
gi|424816439|ref|ZP_18241590.1| hypothetical protein ECD227_1556 [Escherichia fergusonii ECD227]
gi|425097492|ref|ZP_18500351.1| hypothetical protein EC34870_2121 [Escherichia coli 3.4870]
gi|425103713|ref|ZP_18506137.1| hypothetical protein EC52239_2169 [Escherichia coli 5.2239]
gi|425109534|ref|ZP_18511589.1| hypothetical protein EC60172_2167 [Escherichia coli 6.0172]
gi|425114696|ref|ZP_18516512.1| hypothetical protein EC80566_1358 [Escherichia coli 8.0566]
gi|425119412|ref|ZP_18521125.1| hypothetical protein EC80569_1312 [Escherichia coli 8.0569]
gi|425125326|ref|ZP_18526664.1| hypothetical protein EC80586_2180 [Escherichia coli 8.0586]
gi|425131274|ref|ZP_18532213.1| hypothetical protein EC82524_1968 [Escherichia coli 8.2524]
gi|425137631|ref|ZP_18538157.1| hypothetical protein EC100833_2159 [Escherichia coli 10.0833]
gi|425143539|ref|ZP_18543664.1| hypothetical protein EC100869_1888 [Escherichia coli 10.0869]
gi|425149641|ref|ZP_18549365.1| hypothetical protein EC880221_1978 [Escherichia coli 88.0221]
gi|425155463|ref|ZP_18554841.1| hypothetical protein ECPA34_2096 [Escherichia coli PA34]
gi|425161913|ref|ZP_18560924.1| hypothetical protein ECFDA506_2413 [Escherichia coli FDA506]
gi|425167558|ref|ZP_18566180.1| hypothetical protein ECFDA507_2061 [Escherichia coli FDA507]
gi|425173690|ref|ZP_18571930.1| hypothetical protein ECFDA504_2053 [Escherichia coli FDA504]
gi|425179641|ref|ZP_18577498.1| hypothetical protein ECFRIK1999_2172 [Escherichia coli FRIK1999]
gi|425185923|ref|ZP_18583338.1| hypothetical protein ECFRIK1997_2229 [Escherichia coli FRIK1997]
gi|425192705|ref|ZP_18589622.1| hypothetical protein ECNE1487_2386 [Escherichia coli NE1487]
gi|425199101|ref|ZP_18595496.1| hypothetical protein ECNE037_2340 [Escherichia coli NE037]
gi|425205612|ref|ZP_18601554.1| hypothetical protein ECFRIK2001_2450 [Escherichia coli FRIK2001]
gi|425211299|ref|ZP_18606850.1| hypothetical protein ECPA4_2128 [Escherichia coli PA4]
gi|425217406|ref|ZP_18612532.1| hypothetical protein ECPA23_2003 [Escherichia coli PA23]
gi|425223963|ref|ZP_18618609.1| hypothetical protein ECPA49_2150 [Escherichia coli PA49]
gi|425230164|ref|ZP_18624370.1| hypothetical protein ECPA45_2131 [Escherichia coli PA45]
gi|425236323|ref|ZP_18630147.1| hypothetical protein ECTT12B_2025 [Escherichia coli TT12B]
gi|425242445|ref|ZP_18635883.1| hypothetical protein ECMA6_2229 [Escherichia coli MA6]
gi|425248476|ref|ZP_18641517.1| hypothetical protein EC5905_2156 [Escherichia coli 5905]
gi|425254380|ref|ZP_18647032.1| hypothetical protein ECCB7326_2043 [Escherichia coli CB7326]
gi|425260608|ref|ZP_18652779.1| hypothetical protein ECEC96038_1932 [Escherichia coli EC96038]
gi|425266706|ref|ZP_18658451.1| hypothetical protein EC5412_2031 [Escherichia coli 5412]
gi|425272358|ref|ZP_18663808.1| hypothetical protein ECTW15901_1596 [Escherichia coli TW15901]
gi|425282851|ref|ZP_18673925.1| hypothetical protein ECTW00353_1475 [Escherichia coli TW00353]
gi|425288122|ref|ZP_18679004.1| hypothetical protein EC3006_1609 [Escherichia coli 3006]
gi|425294179|ref|ZP_18684530.1| hypothetical protein ECPA38_1978 [Escherichia coli PA38]
gi|425299806|ref|ZP_18689797.1| hypothetical protein EC07798_1702 [Escherichia coli 07798]
gi|425304860|ref|ZP_18694613.1| hypothetical protein ECN1_1294 [Escherichia coli N1]
gi|425310860|ref|ZP_18700150.1| hypothetical protein ECEC1735_2045 [Escherichia coli EC1735]
gi|425316782|ref|ZP_18705681.1| hypothetical protein ECEC1736_1936 [Escherichia coli EC1736]
gi|425322892|ref|ZP_18711370.1| hypothetical protein ECEC1737_1948 [Escherichia coli EC1737]
gi|425329063|ref|ZP_18717086.1| hypothetical protein ECEC1846_1933 [Escherichia coli EC1846]
gi|425335233|ref|ZP_18722769.1| hypothetical protein ECEC1847_1936 [Escherichia coli EC1847]
gi|425341642|ref|ZP_18728678.1| hypothetical protein ECEC1848_2117 [Escherichia coli EC1848]
gi|425347486|ref|ZP_18734109.1| hypothetical protein ECEC1849_1902 [Escherichia coli EC1849]
gi|425353741|ref|ZP_18739942.1| hypothetical protein ECEC1850_2100 [Escherichia coli EC1850]
gi|425359716|ref|ZP_18745505.1| hypothetical protein ECEC1856_1928 [Escherichia coli EC1856]
gi|425365850|ref|ZP_18751197.1| hypothetical protein ECEC1862_1931 [Escherichia coli EC1862]
gi|425372269|ref|ZP_18757051.1| hypothetical protein ECEC1864_2100 [Escherichia coli EC1864]
gi|425385105|ref|ZP_18768799.1| hypothetical protein ECEC1866_1785 [Escherichia coli EC1866]
gi|425391802|ref|ZP_18775063.1| hypothetical protein ECEC1868_2133 [Escherichia coli EC1868]
gi|425397922|ref|ZP_18780769.1| hypothetical protein ECEC1869_2104 [Escherichia coli EC1869]
gi|425403928|ref|ZP_18786332.1| hypothetical protein ECEC1870_1822 [Escherichia coli EC1870]
gi|425410480|ref|ZP_18792404.1| hypothetical protein ECNE098_2152 [Escherichia coli NE098]
gi|425416762|ref|ZP_18798185.1| hypothetical protein ECFRIK523_1987 [Escherichia coli FRIK523]
gi|425421999|ref|ZP_18803190.1| hypothetical protein EC01288_1364 [Escherichia coli 0.1288]
gi|425428002|ref|ZP_18808795.1| hypothetical protein EC01304_2099 [Escherichia coli 0.1304]
gi|428946450|ref|ZP_19018897.1| hypothetical protein EC881467_2063 [Escherichia coli 88.1467]
gi|428952657|ref|ZP_19024585.1| hypothetical protein EC881042_2094 [Escherichia coli 88.1042]
gi|428958491|ref|ZP_19029969.1| hypothetical protein EC890511_1950 [Escherichia coli 89.0511]
gi|428965007|ref|ZP_19035948.1| hypothetical protein EC900091_2262 [Escherichia coli 90.0091]
gi|428970910|ref|ZP_19041382.1| hypothetical protein EC900039_1848 [Escherichia coli 90.0039]
gi|428977370|ref|ZP_19047340.1| hypothetical protein EC902281_1982 [Escherichia coli 90.2281]
gi|428983140|ref|ZP_19052674.1| hypothetical protein EC930055_1925 [Escherichia coli 93.0055]
gi|428989504|ref|ZP_19058590.1| hypothetical protein EC930056_2134 [Escherichia coli 93.0056]
gi|428995216|ref|ZP_19063954.1| hypothetical protein EC940618_1914 [Escherichia coli 94.0618]
gi|429001395|ref|ZP_19069705.1| hypothetical protein EC950183_2088 [Escherichia coli 95.0183]
gi|429007567|ref|ZP_19075250.1| hypothetical protein EC951288_1861 [Escherichia coli 95.1288]
gi|429014028|ref|ZP_19081068.1| hypothetical protein EC950943_2128 [Escherichia coli 95.0943]
gi|429020034|ref|ZP_19086655.1| hypothetical protein EC960428_1960 [Escherichia coli 96.0428]
gi|429025913|ref|ZP_19092093.1| hypothetical protein EC960427_2008 [Escherichia coli 96.0427]
gi|429032082|ref|ZP_19097745.1| hypothetical protein EC960939_1977 [Escherichia coli 96.0939]
gi|429038203|ref|ZP_19103459.1| hypothetical protein EC960932_2097 [Escherichia coli 96.0932]
gi|429044216|ref|ZP_19109040.1| hypothetical protein EC960107_2003 [Escherichia coli 96.0107]
gi|429049748|ref|ZP_19114368.1| hypothetical protein EC970003_1883 [Escherichia coli 97.0003]
gi|429055026|ref|ZP_19119449.1| hypothetical protein EC971742_1614 [Escherichia coli 97.1742]
gi|429060723|ref|ZP_19124807.1| hypothetical protein EC970007_1610 [Escherichia coli 97.0007]
gi|429066677|ref|ZP_19130290.1| hypothetical protein EC990672_2016 [Escherichia coli 99.0672]
gi|429072795|ref|ZP_19136100.1| hypothetical protein EC990678_1912 [Escherichia coli 99.0678]
gi|429078131|ref|ZP_19141306.1| hypothetical protein EC990713_1964 [Escherichia coli 99.0713]
gi|429718705|ref|ZP_19253649.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724043|ref|ZP_19258914.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429775663|ref|ZP_19307654.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02030]
gi|429777751|ref|ZP_19309720.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429781995|ref|ZP_19313922.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02092]
gi|429788498|ref|ZP_19320378.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02093]
gi|429793928|ref|ZP_19325769.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02281]
gi|429797581|ref|ZP_19329385.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02318]
gi|429806001|ref|ZP_19337740.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02913]
gi|429810446|ref|ZP_19342147.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-03439]
gi|429814551|ref|ZP_19346220.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-04080]
gi|429819914|ref|ZP_19351539.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-03943]
gi|429825825|ref|ZP_19357054.1| hypothetical protein EC960109_2104 [Escherichia coli 96.0109]
gi|429832116|ref|ZP_19362687.1| hypothetical protein EC970010_1995 [Escherichia coli 97.0010]
gi|429912246|ref|ZP_19378202.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913130|ref|ZP_19379080.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918174|ref|ZP_19384109.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429923968|ref|ZP_19389884.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932862|ref|ZP_19398756.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934466|ref|ZP_19400356.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940128|ref|ZP_19406002.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429947764|ref|ZP_19413619.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950402|ref|ZP_19416250.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429953701|ref|ZP_19419537.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432353200|ref|ZP_19596476.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE2]
gi|432357707|ref|ZP_19600938.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE4]
gi|432362331|ref|ZP_19605504.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE5]
gi|432369335|ref|ZP_19612431.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE10]
gi|432376458|ref|ZP_19619457.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE12]
gi|432381032|ref|ZP_19623980.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE15]
gi|432386788|ref|ZP_19629681.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE16]
gi|432391526|ref|ZP_19634373.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE21]
gi|432397171|ref|ZP_19639954.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE25]
gi|432401550|ref|ZP_19644303.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE26]
gi|432406129|ref|ZP_19648847.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE28]
gi|432411470|ref|ZP_19654142.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE39]
gi|432416366|ref|ZP_19658982.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE44]
gi|432421538|ref|ZP_19664088.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE178]
gi|432425618|ref|ZP_19668126.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE181]
gi|432431463|ref|ZP_19673899.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE187]
gi|432436475|ref|ZP_19678866.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE188]
gi|432440788|ref|ZP_19683131.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE189]
gi|432445888|ref|ZP_19688191.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE191]
gi|432453813|ref|ZP_19696042.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE193]
gi|432456295|ref|ZP_19698489.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE201]
gi|432460392|ref|ZP_19702544.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE204]
gi|432465355|ref|ZP_19707448.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE205]
gi|432470652|ref|ZP_19712702.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE206]
gi|432475412|ref|ZP_19717417.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE208]
gi|432480670|ref|ZP_19722629.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE210]
gi|432484966|ref|ZP_19726884.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE212]
gi|432488952|ref|ZP_19730834.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE213]
gi|432495270|ref|ZP_19737078.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE214]
gi|432499742|ref|ZP_19741505.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE216]
gi|432504039|ref|ZP_19745772.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE220]
gi|432513591|ref|ZP_19750820.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE224]
gi|432517351|ref|ZP_19754546.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE228]
gi|432523460|ref|ZP_19760594.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE230]
gi|432530646|ref|ZP_19767681.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE233]
gi|432533487|ref|ZP_19770474.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE234]
gi|432537449|ref|ZP_19774355.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE235]
gi|432542700|ref|ZP_19779551.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE236]
gi|432548174|ref|ZP_19784958.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE237]
gi|432553348|ref|ZP_19790077.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE47]
gi|432558468|ref|ZP_19795148.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE49]
gi|432568304|ref|ZP_19804824.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE53]
gi|432573391|ref|ZP_19809876.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE55]
gi|432579943|ref|ZP_19816372.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE56]
gi|432583453|ref|ZP_19819856.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE57]
gi|432587633|ref|ZP_19823990.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE58]
gi|432592448|ref|ZP_19828774.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE60]
gi|432601774|ref|ZP_19838021.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE66]
gi|432607180|ref|ZP_19843371.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE67]
gi|432611074|ref|ZP_19847239.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE72]
gi|432616168|ref|ZP_19852292.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE75]
gi|432621449|ref|ZP_19857487.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE76]
gi|432626840|ref|ZP_19862821.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE77]
gi|432631023|ref|ZP_19866953.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE80]
gi|432636510|ref|ZP_19872390.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE81]
gi|432640569|ref|ZP_19876406.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE83]
gi|432645837|ref|ZP_19881631.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE86]
gi|432650746|ref|ZP_19886505.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE87]
gi|432655437|ref|ZP_19891146.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE93]
gi|432660525|ref|ZP_19896173.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE111]
gi|432665655|ref|ZP_19901238.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE116]
gi|432670255|ref|ZP_19905792.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE119]
gi|432674266|ref|ZP_19909750.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE142]
gi|432679826|ref|ZP_19915211.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE143]
gi|432685074|ref|ZP_19920381.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE156]
gi|432691218|ref|ZP_19926452.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE161]
gi|432694135|ref|ZP_19929344.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE162]
gi|432698714|ref|ZP_19933875.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE169]
gi|432703920|ref|ZP_19939035.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE171]
gi|432710297|ref|ZP_19945361.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE6]
gi|432713082|ref|ZP_19948125.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE8]
gi|432718289|ref|ZP_19953264.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE9]
gi|432722795|ref|ZP_19957717.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE17]
gi|432727382|ref|ZP_19962263.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE18]
gi|432732068|ref|ZP_19966903.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE45]
gi|432736744|ref|ZP_19971512.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE42]
gi|432741069|ref|ZP_19975790.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE23]
gi|432745324|ref|ZP_19980018.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE43]
gi|432749716|ref|ZP_19984327.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE29]
gi|432754113|ref|ZP_19988666.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE22]
gi|432759147|ref|ZP_19993646.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE46]
gi|432764610|ref|ZP_19999054.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE48]
gi|432770174|ref|ZP_20004522.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE50]
gi|432774426|ref|ZP_20008710.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE54]
gi|432778245|ref|ZP_20012490.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE59]
gi|432783244|ref|ZP_20017427.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE63]
gi|432787189|ref|ZP_20021324.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE65]
gi|432792516|ref|ZP_20026603.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE78]
gi|432798476|ref|ZP_20032500.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE79]
gi|432801549|ref|ZP_20035531.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE84]
gi|432805363|ref|ZP_20039303.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE91]
gi|432808881|ref|ZP_20042786.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE101]
gi|432814887|ref|ZP_20048676.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE115]
gi|432820614|ref|ZP_20054317.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE118]
gi|432826770|ref|ZP_20060424.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE123]
gi|432831235|ref|ZP_20064815.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE135]
gi|432834313|ref|ZP_20067854.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE136]
gi|432838968|ref|ZP_20072456.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE140]
gi|432843979|ref|ZP_20077033.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE141]
gi|432849779|ref|ZP_20080922.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE144]
gi|432861071|ref|ZP_20086155.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE146]
gi|432874795|ref|ZP_20093659.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE147]
gi|432881192|ref|ZP_20097564.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE154]
gi|432886122|ref|ZP_20100317.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE158]
gi|432894064|ref|ZP_20106025.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE165]
gi|432898139|ref|ZP_20108970.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE192]
gi|432904220|ref|ZP_20113442.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE194]
gi|432912204|ref|ZP_20118137.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE190]
gi|432918598|ref|ZP_20122939.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE173]
gi|432926373|ref|ZP_20128154.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE175]
gi|432933851|ref|ZP_20133468.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE184]
gi|432937399|ref|ZP_20135902.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE183]
gi|432946687|ref|ZP_20142236.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE196]
gi|432954629|ref|ZP_20146653.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE197]
gi|432961127|ref|ZP_20151012.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE202]
gi|432967384|ref|ZP_20156300.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE203]
gi|432971509|ref|ZP_20160382.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE207]
gi|432977969|ref|ZP_20166792.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE209]
gi|432980789|ref|ZP_20169567.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE211]
gi|432985042|ref|ZP_20173771.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE215]
gi|432990382|ref|ZP_20179048.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE217]
gi|432995024|ref|ZP_20183638.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE218]
gi|432999548|ref|ZP_20188081.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE223]
gi|433004819|ref|ZP_20193252.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE227]
gi|433007320|ref|ZP_20195740.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE229]
gi|433013491|ref|ZP_20201861.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE104]
gi|433018238|ref|ZP_20206492.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE105]
gi|433023133|ref|ZP_20211141.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE106]
gi|433028240|ref|ZP_20216106.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE109]
gi|433032881|ref|ZP_20220639.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE112]
gi|433038287|ref|ZP_20225895.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE113]
gi|433042753|ref|ZP_20230269.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE117]
gi|433052636|ref|ZP_20239851.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE122]
gi|433057605|ref|ZP_20244682.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE124]
gi|433062503|ref|ZP_20249451.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE125]
gi|433067586|ref|ZP_20254397.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE128]
gi|433072292|ref|ZP_20258979.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE129]
gi|433077443|ref|ZP_20264000.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE131]
gi|433082230|ref|ZP_20268701.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE133]
gi|433086872|ref|ZP_20273262.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE137]
gi|433091660|ref|ZP_20277946.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE138]
gi|433096157|ref|ZP_20282364.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE139]
gi|433100822|ref|ZP_20286924.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE145]
gi|433105421|ref|ZP_20291432.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE148]
gi|433110545|ref|ZP_20296414.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE150]
gi|433115182|ref|ZP_20300993.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE153]
gi|433119808|ref|ZP_20305506.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE157]
gi|433124805|ref|ZP_20310386.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE160]
gi|433129623|ref|ZP_20315083.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE163]
gi|433134422|ref|ZP_20319786.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE166]
gi|433138865|ref|ZP_20324143.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE167]
gi|433143879|ref|ZP_20329038.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE168]
gi|433148806|ref|ZP_20333850.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE174]
gi|433153415|ref|ZP_20338376.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE176]
gi|433158257|ref|ZP_20343115.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE177]
gi|433163112|ref|ZP_20347866.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE179]
gi|433168171|ref|ZP_20352825.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE180]
gi|433173089|ref|ZP_20357634.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE232]
gi|433177796|ref|ZP_20362235.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE82]
gi|433182780|ref|ZP_20367068.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE85]
gi|433188050|ref|ZP_20372162.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE88]
gi|433193272|ref|ZP_20377279.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE90]
gi|433197905|ref|ZP_20381821.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE94]
gi|433202839|ref|ZP_20386627.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE95]
gi|433207396|ref|ZP_20391088.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE97]
gi|433212168|ref|ZP_20395776.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE99]
gi|433324711|ref|ZP_20401963.1| hypothetical protein B185_014133 [Escherichia coli J96]
gi|443617356|ref|YP_007381212.1| hypothetical protein APECO78_10195 [Escherichia coli APEC O78]
gi|444924352|ref|ZP_21243827.1| hypothetical protein EC09BKT78844_2085 [Escherichia coli
09BKT078844]
gi|444930325|ref|ZP_21249426.1| hypothetical protein EC990814_1748 [Escherichia coli 99.0814]
gi|444935595|ref|ZP_21254460.1| hypothetical protein EC990815_1611 [Escherichia coli 99.0815]
gi|444941244|ref|ZP_21259832.1| hypothetical protein EC990816_1692 [Escherichia coli 99.0816]
gi|444946910|ref|ZP_21265278.1| hypothetical protein EC990839_1712 [Escherichia coli 99.0839]
gi|444952419|ref|ZP_21270577.1| hypothetical protein EC990848_1734 [Escherichia coli 99.0848]
gi|444957892|ref|ZP_21275818.1| hypothetical protein EC991753_1773 [Escherichia coli 99.1753]
gi|444963170|ref|ZP_21280853.1| hypothetical protein EC991775_1702 [Escherichia coli 99.1775]
gi|444968882|ref|ZP_21286306.1| hypothetical protein EC991793_1826 [Escherichia coli 99.1793]
gi|444974343|ref|ZP_21291551.1| hypothetical protein EC991805_1629 [Escherichia coli 99.1805]
gi|444979843|ref|ZP_21296798.1| hypothetical protein ECATCC700728_1691 [Escherichia coli ATCC
700728]
gi|444985140|ref|ZP_21301965.1| hypothetical protein ECPA11_1764 [Escherichia coli PA11]
gi|444990439|ref|ZP_21307133.1| hypothetical protein ECPA19_1728 [Escherichia coli PA19]
gi|444995682|ref|ZP_21312232.1| hypothetical protein ECPA13_1492 [Escherichia coli PA13]
gi|445001310|ref|ZP_21317736.1| hypothetical protein ECPA2_1876 [Escherichia coli PA2]
gi|445006733|ref|ZP_21323029.1| hypothetical protein ECPA47_1675 [Escherichia coli PA47]
gi|445011869|ref|ZP_21328021.1| hypothetical protein ECPA48_1584 [Escherichia coli PA48]
gi|445017628|ref|ZP_21333633.1| hypothetical protein ECPA8_1776 [Escherichia coli PA8]
gi|445023209|ref|ZP_21339085.1| hypothetical protein EC71982_1895 [Escherichia coli 7.1982]
gi|445028450|ref|ZP_21344180.1| hypothetical protein EC991781_1877 [Escherichia coli 99.1781]
gi|445033931|ref|ZP_21349505.1| hypothetical protein EC991762_1890 [Escherichia coli 99.1762]
gi|445039597|ref|ZP_21355019.1| hypothetical protein ECPA35_1914 [Escherichia coli PA35]
gi|445044739|ref|ZP_21360039.1| hypothetical protein EC34880_1702 [Escherichia coli 3.4880]
gi|445050405|ref|ZP_21365520.1| hypothetical protein EC950083_1741 [Escherichia coli 95.0083]
gi|445056124|ref|ZP_21371028.1| hypothetical protein EC990670_1949 [Escherichia coli 99.0670]
gi|450187920|ref|ZP_21890054.1| hypothetical protein A364_07067 [Escherichia coli SEPT362]
gi|450213716|ref|ZP_21894990.1| hypothetical protein C202_06018 [Escherichia coli O08]
gi|450242444|ref|ZP_21899843.1| hypothetical protein C201_05760 [Escherichia coli S17]
gi|452967984|ref|ZP_21966211.1| hypothetical protein EC4009_RS04755 [Escherichia coli O157:H7 str.
EC4009]
gi|84027907|sp|P0AFR5.1|YCIO_ECOL6 RecName: Full=Uncharacterized protein YciO
gi|84027908|sp|P0AFR4.1|YCIO_ECOLI RecName: Full=Uncharacterized protein YciO
gi|84027909|sp|P0AFR6.1|YCIO_SHIFL RecName: Full=Uncharacterized protein YciO
gi|85674890|dbj|BAA14801.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|87081864|gb|AAC74349.2| putative RNA binding protein [Escherichia coli str. K-12 substr.
MG1655]
gi|110343088|gb|ABG69325.1| probable translation factor YciO [Escherichia coli 536]
gi|157066452|gb|ABV05707.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli HS]
gi|157077840|gb|ABV17548.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E24377A]
gi|169755297|gb|ACA77996.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli ATCC 8739]
gi|169888779|gb|ACB02486.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|187430512|gb|ACD09786.1| Sua5/YciO/YrdC/YwlC family protein [Shigella boydii CDC 3083-94]
gi|188490575|gb|EDU65678.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 53638]
gi|189354813|gb|EDU73232.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O157:H7 str.
EC4401]
gi|190903293|gb|EDV63014.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B7A]
gi|192956752|gb|EDV87207.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E110019]
gi|194416711|gb|EDX32841.1| Sua5/YciO/YrdC/YwlC family protein [Shigella dysenteriae 1012]
gi|209911766|dbj|BAG76840.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215264634|emb|CAS09005.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|218351570|emb|CAU97282.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218356583|emb|CAQ89206.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|218360587|emb|CAQ98145.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218365021|emb|CAR02724.1| conserved hypothetical protein [Escherichia coli S88]
gi|218369960|emb|CAR17734.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218426821|emb|CAR07671.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|218431887|emb|CAR12772.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222033071|emb|CAP75811.1| Uncharacterized protein yciO [Escherichia coli LF82]
gi|238860471|gb|ACR62469.1| conserved protein [Escherichia coli BW2952]
gi|242377044|emb|CAQ31768.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253324780|gb|ACT29382.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973247|gb|ACT38918.1| hypothetical protein ECB_01241 [Escherichia coli B str. REL606]
gi|253977461|gb|ACT43131.1| hypothetical protein ECD_01241 [Escherichia coli BL21(DE3)]
gi|254592255|gb|ACT71616.1| predicted RNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|257758762|dbj|BAI30259.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257764072|dbj|BAI35567.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260449603|gb|ACX40025.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli DH1]
gi|281178455|dbj|BAI54785.1| conserved hypothetical protein [Escherichia coli SE15]
gi|291324447|gb|EFE63869.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B088]
gi|291427016|gb|EFF00043.1| hypothetical protein ECGG_00131 [Escherichia coli FVEC1412]
gi|291434657|gb|EFF07630.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B185]
gi|291470119|gb|EFF12603.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B354]
gi|294493370|gb|ADE92126.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli IHE3034]
gi|298277891|gb|EFI19405.1| hypothetical protein ECFG_00142 [Escherichia coli FVEC1302]
gi|300301155|gb|EFJ57540.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 185-1]
gi|300309296|gb|EFJ63816.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 200-1]
gi|300317270|gb|EFJ67054.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 175-1]
gi|300359989|gb|EFJ75859.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 198-1]
gi|300399232|gb|EFJ82770.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 69-1]
gi|300403901|gb|EFJ87439.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 84-1]
gi|300408752|gb|EFJ92290.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 45-1]
gi|300413469|gb|EFJ96779.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 115-1]
gi|300417349|gb|EFK00660.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 182-1]
gi|300448867|gb|EFK12487.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 116-1]
gi|300455105|gb|EFK18598.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 21-1]
gi|300464166|gb|EFK27659.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 187-1]
gi|300524986|gb|EFK46055.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 119-7]
gi|300527303|gb|EFK48365.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 107-1]
gi|300839903|gb|EFK67663.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 124-1]
gi|300846357|gb|EFK74117.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 78-1]
gi|301074601|gb|EFK89407.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 146-1]
gi|305852984|gb|EFM53429.1| hypothetical protein ECNC101_17397 [Escherichia coli NC101]
gi|306909697|gb|EFN40191.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli W]
gi|307553325|gb|ADN46100.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli ABU 83972]
gi|307627159|gb|ADN71463.1| hypothetical protein UM146_10450 [Escherichia coli UM146]
gi|308122847|gb|EFO60109.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 145-7]
gi|309701565|emb|CBJ00872.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|312288269|gb|EFR16171.1| yrdC domain protein [Escherichia coli 2362-75]
gi|312945901|gb|ADR26728.1| hypothetical protein NRG857_06500 [Escherichia coli O83:H1 str. NRG
857C]
gi|313649456|gb|EFS13887.1| yrdC domain protein [Shigella flexneri 2a str. 2457T]
gi|315060518|gb|ADT74845.1| hypothetical protein ECW_m1359 [Escherichia coli W]
gi|315135903|dbj|BAJ43062.1| hypothetical protein ECDH1ME8569_1206 [Escherichia coli DH1]
gi|315254774|gb|EFU34742.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 85-1]
gi|315289105|gb|EFU48503.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 110-3]
gi|315294758|gb|EFU54101.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 153-1]
gi|315297256|gb|EFU56536.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 16-3]
gi|315619345|gb|EFU99889.1| yrdC domain protein [Escherichia coli 3431]
gi|320181707|gb|EFW56618.1| YciO family [Shigella boydii ATCC 9905]
gi|320189982|gb|EFW64634.1| YciO family [Escherichia coli O157:H7 str. EC1212]
gi|320637161|gb|EFX06987.1| hypothetical protein ECO5101_20125 [Escherichia coli O157:H7 str.
G5101]
gi|320642527|gb|EFX11775.1| hypothetical protein ECO9389_21424 [Escherichia coli O157:H- str.
493-89]
gi|320647880|gb|EFX16588.1| hypothetical protein ECO2687_09354 [Escherichia coli O157:H- str. H
2687]
gi|320653482|gb|EFX21587.1| hypothetical protein ECO7815_06412 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659182|gb|EFX26771.1| hypothetical protein ECO5905_15803 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320663975|gb|EFX31162.1| hypothetical protein ECOSU61_13093 [Escherichia coli O157:H7 str.
LSU-61]
gi|323162372|gb|EFZ48227.1| yrdC domain protein [Escherichia coli E128010]
gi|323168240|gb|EFZ53925.1| yrdC domain protein [Shigella sonnei 53G]
gi|323172377|gb|EFZ58014.1| yrdC domain protein [Escherichia coli LT-68]
gi|323179781|gb|EFZ65342.1| yrdC domain protein [Escherichia coli OK1180]
gi|323185574|gb|EFZ70935.1| yrdC domain protein [Escherichia coli OK1357]
gi|323378919|gb|ADX51187.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KO11FL]
gi|323937588|gb|EGB33856.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E1520]
gi|323942381|gb|EGB38551.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E482]
gi|323947452|gb|EGB43456.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H120]
gi|323949130|gb|EGB45022.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H252]
gi|323953862|gb|EGB49663.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H263]
gi|323962567|gb|EGB58147.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H489]
gi|323973493|gb|EGB68679.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA007]
gi|324006123|gb|EGB75342.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 57-2]
gi|324011322|gb|EGB80541.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 60-1]
gi|324018953|gb|EGB88172.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 117-3]
gi|324113139|gb|EGC07114.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia fergusonii B253]
gi|324117540|gb|EGC11446.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli E1167]
gi|325497459|gb|EGC95318.1| hypothetical protein ECD227_1556 [Escherichia fergusonii ECD227]
gi|326341073|gb|EGD64866.1| YciO family [Escherichia coli O157:H7 str. 1125]
gi|331055562|gb|EGI27571.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA206]
gi|331061100|gb|EGI33064.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA143]
gi|331080383|gb|EGI51562.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H299]
gi|332091657|gb|EGI96737.1| yrdC domain protein [Shigella boydii 5216-82]
gi|332094838|gb|EGI99882.1| yrdC domain protein [Shigella boydii 3594-74]
gi|332098121|gb|EGJ03094.1| yrdC domain protein [Shigella dysenteriae 155-74]
gi|332342859|gb|AEE56193.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332757919|gb|EGJ88246.1| yrdC domain protein [Shigella flexneri 4343-70]
gi|332759350|gb|EGJ89658.1| yrdC domain protein [Shigella flexneri 2747-71]
gi|332760362|gb|EGJ90652.1| yrdC domain protein [Shigella flexneri K-671]
gi|332767502|gb|EGJ97696.1| yrdC domain protein [Shigella flexneri 2930-71]
gi|333004582|gb|EGK24106.1| yrdC domain protein [Shigella flexneri VA-6]
gi|333005653|gb|EGK25171.1| yrdC domain protein [Shigella flexneri K-218]
gi|333019096|gb|EGK38386.1| yrdC domain protein [Shigella flexneri K-304]
gi|333969474|gb|AEG36279.1| Hypothetical protein ECNA114_1454 [Escherichia coli NA114]
gi|335576241|gb|EGM62499.1| yrdC domain protein [Shigella flexneri J1713]
gi|339414597|gb|AEJ56269.1| yrdC domain protein [Escherichia coli UMNF18]
gi|340734635|gb|EGR63747.1| hypothetical protein HUSEC41_07117 [Escherichia coli O104:H4 str.
01-09591]
gi|340740401|gb|EGR74604.1| hypothetical protein HUSEC_07407 [Escherichia coli O104:H4 str.
LB226692]
gi|341921303|gb|EGT70904.1| hypothetical protein C22711_4938 [Escherichia coli O104:H4 str.
C227-11]
gi|342363941|gb|EGU28045.1| hypothetical protein IAE_05290 [Escherichia coli XH140A]
gi|342928874|gb|EGU97596.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 79-10]
gi|344194173|gb|EGV48248.1| hypothetical protein IAM_07408 [Escherichia coli XH001]
gi|345339356|gb|EGW71782.1| yrdC domain protein [Escherichia coli STEC_C165-02]
gi|345340206|gb|EGW72626.1| yrdC domain protein [Escherichia coli STEC_B2F1]
gi|345342291|gb|EGW74688.1| yrdC domain protein [Escherichia coli 2534-86]
gi|345351329|gb|EGW83592.1| yrdC domain protein [Escherichia coli STEC_94C]
gi|345357072|gb|EGW89271.1| yrdC domain protein [Escherichia coli 3030-1]
gi|345360293|gb|EGW92463.1| yrdC domain protein [Escherichia coli STEC_DG131-3]
gi|345364079|gb|EGW96215.1| yrdC domain protein [Escherichia coli STEC_EH250]
gi|345374953|gb|EGX06903.1| yrdC domain protein [Escherichia coli STEC_MHI813]
gi|345379262|gb|EGX11176.1| yrdC domain protein [Escherichia coli G58-1]
gi|345380280|gb|EGX12180.1| yrdC domain protein [Escherichia coli STEC_H.1.8]
gi|345388899|gb|EGX18708.1| yrdC domain protein [Escherichia coli STEC_S1191]
gi|345394422|gb|EGX24182.1| yrdC domain protein [Escherichia coli TX1999]
gi|354865209|gb|EHF25638.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
C236-11]
gi|354870211|gb|EHF30616.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
C227-11]
gi|354872002|gb|EHF32399.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
04-8351]
gi|354875502|gb|EHF35868.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
09-7901]
gi|354876049|gb|EHF36411.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4404]
gi|354881525|gb|EHF41854.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4522]
gi|354881979|gb|EHF42306.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-3677]
gi|354897937|gb|EHF58093.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354900032|gb|EHF60168.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4623]
gi|354902627|gb|EHF62744.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354904110|gb|EHF64204.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354914866|gb|EHF74847.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354920425|gb|EHF80359.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|359331884|dbj|BAL38331.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|371594535|gb|EHN83398.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TA124]
gi|371596400|gb|EHN85238.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H494]
gi|371604824|gb|EHN93450.1| hypothetical protein ESNG_03147 [Escherichia coli B093]
gi|371613275|gb|EHO01775.1| hypothetical protein ESPG_01368 [Escherichia coli H397]
gi|371613662|gb|EHO02155.1| hypothetical protein ESOG_02564 [Escherichia coli E101]
gi|373244457|gb|EHP63941.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 4_1_47FAA]
gi|374358451|gb|AEZ40158.1| hypothetical protein ECO55CA74_07810 [Escherichia coli O55:H7 str.
RM12579]
gi|375319627|gb|EHS65736.1| hypothetical protein T22_18463 [Escherichia coli O157:H43 str. T22]
gi|377846602|gb|EHU11612.1| yrdC domain protein [Escherichia coli DEC1A]
gi|377848211|gb|EHU13205.1| yrdC domain protein [Escherichia coli DEC1C]
gi|377851348|gb|EHU16297.1| yrdC domain protein [Escherichia coli DEC1B]
gi|377859952|gb|EHU24779.1| hypothetical protein ECDEC1D_1942 [Escherichia coli DEC1D]
gi|377864301|gb|EHU29098.1| yrdC domain protein [Escherichia coli DEC1E]
gi|377866367|gb|EHU31139.1| hypothetical protein ECDEC2A_1699 [Escherichia coli DEC2A]
gi|377877250|gb|EHU41847.1| yrdC domain protein [Escherichia coli DEC2B]
gi|377882232|gb|EHU46778.1| yrdC domain protein [Escherichia coli DEC2C]
gi|377882461|gb|EHU47006.1| yrdC domain protein [Escherichia coli DEC2D]
gi|377895947|gb|EHU60353.1| yrdC domain protein [Escherichia coli DEC2E]
gi|377896115|gb|EHU60520.1| yrdC domain protein [Escherichia coli DEC3A]
gi|377896418|gb|EHU60816.1| yrdC domain protein [Escherichia coli DEC3B]
gi|377908019|gb|EHU72241.1| yrdC domain protein [Escherichia coli DEC3C]
gi|377912930|gb|EHU77077.1| yrdC domain protein [Escherichia coli DEC3D]
gi|377915741|gb|EHU79849.1| yrdC domain protein [Escherichia coli DEC3E]
gi|377924618|gb|EHU88564.1| yrdC domain protein [Escherichia coli DEC3F]
gi|377930172|gb|EHU94059.1| yrdC domain protein [Escherichia coli DEC4A]
gi|377934924|gb|EHU98750.1| yrdC domain protein [Escherichia coli DEC4B]
gi|377945369|gb|EHV09066.1| yrdC domain protein [Escherichia coli DEC4C]
gi|377945620|gb|EHV09311.1| yrdC domain protein [Escherichia coli DEC4D]
gi|377951043|gb|EHV14663.1| yrdC domain protein [Escherichia coli DEC4E]
gi|377959823|gb|EHV23318.1| yrdC domain protein [Escherichia coli DEC4F]
gi|377964001|gb|EHV27441.1| yrdC domain protein [Escherichia coli DEC5A]
gi|377969516|gb|EHV32892.1| yrdC domain protein [Escherichia coli DEC5B]
gi|377976821|gb|EHV40123.1| yrdC domain protein [Escherichia coli DEC5C]
gi|377977937|gb|EHV41218.1| yrdC domain protein [Escherichia coli DEC5D]
gi|377985855|gb|EHV49064.1| hypothetical protein ECDEC5E_1544 [Escherichia coli DEC5E]
gi|377996226|gb|EHV59334.1| hypothetical protein ECDEC6A_1558 [Escherichia coli DEC6A]
gi|377998091|gb|EHV61188.1| yrdC domain protein [Escherichia coli DEC6B]
gi|378001090|gb|EHV64150.1| hypothetical protein ECDEC6C_1410 [Escherichia coli DEC6C]
gi|378010151|gb|EHV73097.1| hypothetical protein ECDEC6D_1501 [Escherichia coli DEC6D]
gi|378012587|gb|EHV75515.1| yrdC domain protein [Escherichia coli DEC6E]
gi|378017731|gb|EHV80601.1| hypothetical protein ECDEC7A_1457 [Escherichia coli DEC7A]
gi|378026251|gb|EHV88890.1| yrdC domain protein [Escherichia coli DEC7C]
gi|378031268|gb|EHV93856.1| yrdC domain protein [Escherichia coli DEC7D]
gi|378035588|gb|EHV98141.1| yrdC domain protein [Escherichia coli DEC7B]
gi|378041178|gb|EHW03641.1| hypothetical protein ECDEC7E_1396 [Escherichia coli DEC7E]
gi|378049838|gb|EHW12174.1| hypothetical protein ECDEC8A_1624 [Escherichia coli DEC8A]
gi|378053109|gb|EHW15410.1| yrdC domain protein [Escherichia coli DEC8B]
gi|378068676|gb|EHW30772.1| yrdC domain protein [Escherichia coli DEC8E]
gi|378077789|gb|EHW39782.1| yrdC domain protein [Escherichia coli DEC9A]
gi|378080144|gb|EHW42109.1| yrdC domain protein [Escherichia coli DEC9B]
gi|378085998|gb|EHW47878.1| yrdC domain protein [Escherichia coli DEC9C]
gi|378093045|gb|EHW54863.1| yrdC domain protein [Escherichia coli DEC9D]
gi|378097725|gb|EHW59472.1| yrdC domain protein [Escherichia coli DEC9E]
gi|378132709|gb|EHW94061.1| yrdC domain protein [Escherichia coli DEC10E]
gi|378133536|gb|EHW94881.1| yrdC domain protein [Escherichia coli DEC11A]
gi|378135741|gb|EHW97043.1| yrdC domain protein [Escherichia coli DEC10F]
gi|378143316|gb|EHX04508.1| yrdC domain protein [Escherichia coli DEC11B]
gi|378151150|gb|EHX12263.1| hypothetical protein ECDEC11D_1471 [Escherichia coli DEC11D]
gi|378153228|gb|EHX14313.1| hypothetical protein ECDEC11C_1650 [Escherichia coli DEC11C]
gi|378159590|gb|EHX20594.1| hypothetical protein ECDEC11E_1524 [Escherichia coli DEC11E]
gi|378171180|gb|EHX32052.1| yrdC domain protein [Escherichia coli DEC12B]
gi|378172941|gb|EHX33788.1| hypothetical protein ECDEC12A_1553 [Escherichia coli DEC12A]
gi|378174435|gb|EHX35261.1| hypothetical protein ECDEC12C_1543 [Escherichia coli DEC12C]
gi|378186212|gb|EHX46835.1| yrdC domain protein [Escherichia coli DEC12D]
gi|378189383|gb|EHX49977.1| yrdC domain protein [Escherichia coli DEC13A]
gi|378192735|gb|EHX53290.1| yrdC domain protein [Escherichia coli DEC12E]
gi|378203549|gb|EHX63971.1| yrdC domain protein [Escherichia coli DEC13B]
gi|378205487|gb|EHX65901.1| yrdC domain protein [Escherichia coli DEC13C]
gi|378206177|gb|EHX66583.1| yrdC domain protein [Escherichia coli DEC13D]
gi|378215946|gb|EHX76237.1| yrdC domain protein [Escherichia coli DEC13E]
gi|378221255|gb|EHX81506.1| hypothetical protein ECDEC14A_1325 [Escherichia coli DEC14A]
gi|378230450|gb|EHX90568.1| yrdC domain protein [Escherichia coli DEC14C]
gi|378233947|gb|EHX94030.1| yrdC domain protein [Escherichia coli DEC14D]
gi|378239570|gb|EHX99550.1| yrdC domain protein [Escherichia coli DEC15A]
gi|378248462|gb|EHY08376.1| yrdC domain protein [Escherichia coli DEC15B]
gi|378249159|gb|EHY09069.1| yrdC domain protein [Escherichia coli DEC15C]
gi|378255817|gb|EHY15672.1| yrdC domain protein [Escherichia coli DEC15D]
gi|378260382|gb|EHY20187.1| yrdC domain protein [Escherichia coli DEC15E]
gi|380348633|gb|EIA36912.1| hypothetical protein OQA_06381 [Escherichia coli SCI-07]
gi|383393309|gb|AFH18267.1| hypothetical protein KO11_16495 [Escherichia coli KO11FL]
gi|383404746|gb|AFH10989.1| hypothetical protein WFL_06620 [Escherichia coli W]
gi|383473609|gb|EID65627.1| hypothetical protein ECW26_38450 [Escherichia coli W26]
gi|384378917|gb|EIE36791.1| hypothetical protein OQE_25580 [Escherichia coli J53]
gi|384473086|gb|EIE57131.1| hypothetical protein ECAI27_06510 [Escherichia coli AI27]
gi|385155693|gb|EIF17694.1| hypothetical protein UWO_12682 [Escherichia coli O32:H37 str. P4]
gi|385539068|gb|EIF85909.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M919]
gi|385706104|gb|EIG43158.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli B799]
gi|386122344|gb|EIG70955.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia sp. 4_1_40B]
gi|386145358|gb|EIG91818.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 97.0246]
gi|386160564|gb|EIH22375.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 1.2264]
gi|386198240|gb|EIH92425.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli JB1-95]
gi|386212892|gb|EII23332.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 9.0111]
gi|388335086|gb|EIL01663.1| hypothetical protein ECO9340_08628 [Escherichia coli O103:H25 str.
CVM9340]
gi|388336151|gb|EIL02699.1| hypothetical protein ECO9450_25261 [Escherichia coli O103:H2 str.
CVM9450]
gi|388351401|gb|EIL16641.1| hypothetical protein ECO9570_02239 [Escherichia coli O111:H8 str.
CVM9570]
gi|388354833|gb|EIL19718.1| hypothetical protein ECO9574_13791 [Escherichia coli O111:H8 str.
CVM9574]
gi|388385044|gb|EIL46748.1| hypothetical protein ECKD1_17336 [Escherichia coli KD1]
gi|388388756|gb|EIL50313.1| hypothetical protein EC54115_17127 [Escherichia coli 541-15]
gi|388391368|gb|EIL52837.1| hypothetical protein ECKD2_10411 [Escherichia coli KD2]
gi|388400682|gb|EIL61397.1| hypothetical protein EC5761_22455 [Escherichia coli 576-1]
gi|388402867|gb|EIL63424.1| hypothetical protein EC75_14720 [Escherichia coli 75]
gi|388405830|gb|EIL66247.1| hypothetical protein EC5411_08693 [Escherichia coli 541-1]
gi|388414008|gb|EIL73984.1| hypothetical protein ECMT8_19969 [Escherichia coli CUMT8]
gi|390646789|gb|EIN25791.1| hypothetical protein ECFRIK1996_2056 [Escherichia coli FRIK1996]
gi|390647278|gb|EIN26187.1| hypothetical protein ECFDA517_2200 [Escherichia coli FDA517]
gi|390647789|gb|EIN26633.1| hypothetical protein ECFDA505_1980 [Escherichia coli FDA505]
gi|390665478|gb|EIN42778.1| hypothetical protein EC93001_2151 [Escherichia coli 93-001]
gi|390667398|gb|EIN44417.1| hypothetical protein ECFRIK1985_2072 [Escherichia coli FRIK1985]
gi|390667446|gb|EIN44461.1| hypothetical protein ECFRIK1990_2085 [Escherichia coli FRIK1990]
gi|390684193|gb|EIN59818.1| hypothetical protein ECPA3_1928 [Escherichia coli PA3]
gi|390686556|gb|EIN61902.1| hypothetical protein ECPA5_1943 [Escherichia coli PA5]
gi|390687127|gb|EIN62415.1| hypothetical protein ECPA9_2099 [Escherichia coli PA9]
gi|390704062|gb|EIN78048.1| hypothetical protein ECPA10_2067 [Escherichia coli PA10]
gi|390704861|gb|EIN78685.1| hypothetical protein ECPA15_2179 [Escherichia coli PA15]
gi|390705524|gb|EIN79243.1| hypothetical protein ECPA14_2040 [Escherichia coli PA14]
gi|390716876|gb|EIN89669.1| hypothetical protein ECPA22_2009 [Escherichia coli PA22]
gi|390728519|gb|EIO00814.1| hypothetical protein ECPA25_1818 [Escherichia coli PA25]
gi|390728946|gb|EIO01193.1| hypothetical protein ECPA24_1907 [Escherichia coli PA24]
gi|390730965|gb|EIO02909.1| hypothetical protein ECPA28_2104 [Escherichia coli PA28]
gi|390747178|gb|EIO17758.1| hypothetical protein ECPA31_1880 [Escherichia coli PA31]
gi|390747987|gb|EIO18524.1| hypothetical protein ECPA32_1981 [Escherichia coli PA32]
gi|390749381|gb|EIO19648.1| hypothetical protein ECPA33_1986 [Escherichia coli PA33]
gi|390759847|gb|EIO29205.1| hypothetical protein ECPA40_2162 [Escherichia coli PA40]
gi|390771167|gb|EIO39870.1| hypothetical protein ECPA41_2042 [Escherichia coli PA41]
gi|390773068|gb|EIO41540.1| hypothetical protein ECPA42_2152 [Escherichia coli PA42]
gi|390773641|gb|EIO42001.1| hypothetical protein ECPA39_2013 [Escherichia coli PA39]
gi|390783570|gb|EIO51168.1| hypothetical protein ECTW06591_1497 [Escherichia coli TW06591]
gi|390791796|gb|EIO59159.1| hypothetical protein ECTW10246_1991 [Escherichia coli TW10246]
gi|390798756|gb|EIO65944.1| hypothetical protein ECTW07945_2031 [Escherichia coli TW07945]
gi|390799290|gb|EIO66460.1| hypothetical protein ECTW11039_2085 [Escherichia coli TW11039]
gi|390809138|gb|EIO75940.1| hypothetical protein ECTW09109_2109 [Escherichia coli TW09109]
gi|390813200|gb|EIO79843.1| hypothetical protein ECTW09098_2072 [Escherichia coli TW09098]
gi|390817350|gb|EIO83786.1| hypothetical protein ECTW10119_2405 [Escherichia coli TW10119]
gi|390832083|gb|EIO97393.1| hypothetical protein ECEC4203_2007 [Escherichia coli EC4203]
gi|390834434|gb|EIO99388.1| hypothetical protein ECTW09195_2046 [Escherichia coli TW09195]
gi|390835546|gb|EIP00306.1| hypothetical protein ECEC4196_1968 [Escherichia coli EC4196]
gi|390851736|gb|EIP14994.1| hypothetical protein ECTW14301_1900 [Escherichia coli TW14301]
gi|390852809|gb|EIP15944.1| hypothetical protein ECTW14313_1961 [Escherichia coli TW14313]
gi|390853740|gb|EIP16718.1| hypothetical protein ECEC4421_1990 [Escherichia coli EC4421]
gi|390866103|gb|EIP28083.1| hypothetical protein ECEC4422_2123 [Escherichia coli EC4422]
gi|390869563|gb|EIP31193.1| hypothetical protein ECEC4013_2215 [Escherichia coli EC4013]
gi|390877063|gb|EIP38015.1| hypothetical protein ECEC4402_1983 [Escherichia coli EC4402]
gi|390882219|gb|EIP42762.1| hypothetical protein ECEC4439_1948 [Escherichia coli EC4439]
gi|390886772|gb|EIP46853.1| hypothetical protein ECEC4436_1924 [Escherichia coli EC4436]
gi|390899583|gb|EIP58821.1| hypothetical protein ECEC4437_2072 [Escherichia coli EC4437]
gi|390901954|gb|EIP61097.1| hypothetical protein ECEC1738_2027 [Escherichia coli EC1738]
gi|390903333|gb|EIP62385.1| hypothetical protein ECEC4448_1971 [Escherichia coli EC4448]
gi|390909976|gb|EIP68740.1| hypothetical protein ECEC1734_1770 [Escherichia coli EC1734]
gi|390921819|gb|EIP79938.1| hypothetical protein ECEC1863_1701 [Escherichia coli EC1863]
gi|390923092|gb|EIP81062.1| hypothetical protein ECEC1845_1925 [Escherichia coli EC1845]
gi|391252030|gb|EIQ11234.1| hypothetical protein SF285071_1518 [Shigella flexneri 2850-71]
gi|391254075|gb|EIQ13238.1| hypothetical protein SFCCH060_1364 [Shigella flexneri CCH060]
gi|391255579|gb|EIQ14726.1| hypothetical protein SFK1770_1929 [Shigella flexneri K-1770]
gi|391273225|gb|EIQ32051.1| hypothetical protein SB96558_1459 [Shigella boydii 965-58]
gi|391283987|gb|EIQ42592.1| hypothetical protein SB444474_1298 [Shigella boydii 4444-74]
gi|391285852|gb|EIQ44424.1| hypothetical protein SS323385_2132 [Shigella sonnei 3233-85]
gi|391294457|gb|EIQ52673.1| yrdC domain protein [Shigella sonnei 4822-66]
gi|391303048|gb|EIQ60890.1| hypothetical protein SD22575_1781 [Shigella dysenteriae 225-75]
gi|391307668|gb|EIQ65399.1| hypothetical protein ECEPECA12_1543 [Escherichia coli EPECa12]
gi|391314043|gb|EIQ71610.1| yrdC domain protein [Escherichia coli EPEC C342-62]
gi|394381367|gb|EJE59061.1| hypothetical protein ECO9634_24028 [Escherichia coli O111:H8 str.
CVM9634]
gi|394392511|gb|EJE69293.1| hypothetical protein ECO9602_06909 [Escherichia coli O111:H8 str.
CVM9602]
gi|397785992|gb|EJK96835.1| yrdC domain protein [Escherichia coli STEC_O31]
gi|397898908|gb|EJL15285.1| yrdC domain protein [Shigella flexneri 6603-63]
gi|397900422|gb|EJL16783.1| yrdC domain protein [Shigella sonnei str. Moseley]
gi|404291815|gb|EJZ48668.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia sp. 1_1_43]
gi|404340963|gb|EJZ67376.1| yrdC domain protein [Shigella flexneri 1485-80]
gi|406778054|gb|AFS57478.1| hypothetical protein O3M_13990 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054637|gb|AFS74688.1| hypothetical protein O3K_14015 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065032|gb|AFS86079.1| hypothetical protein O3O_11615 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408068613|gb|EKH03029.1| hypothetical protein ECPA7_2517 [Escherichia coli PA7]
gi|408072171|gb|EKH06493.1| hypothetical protein ECFRIK920_2009 [Escherichia coli FRIK920]
gi|408079807|gb|EKH13909.1| hypothetical protein ECPA34_2096 [Escherichia coli PA34]
gi|408084267|gb|EKH18050.1| hypothetical protein ECFDA506_2413 [Escherichia coli FDA506]
gi|408086617|gb|EKH20139.1| hypothetical protein ECFDA507_2061 [Escherichia coli FDA507]
gi|408096882|gb|EKH29803.1| hypothetical protein ECFDA504_2053 [Escherichia coli FDA504]
gi|408101992|gb|EKH34409.1| hypothetical protein ECFRIK1999_2172 [Escherichia coli FRIK1999]
gi|408109418|gb|EKH41343.1| hypothetical protein ECFRIK1997_2229 [Escherichia coli FRIK1997]
gi|408113846|gb|EKH45426.1| hypothetical protein ECNE1487_2386 [Escherichia coli NE1487]
gi|408121481|gb|EKH52438.1| hypothetical protein ECNE037_2340 [Escherichia coli NE037]
gi|408126539|gb|EKH57098.1| hypothetical protein ECFRIK2001_2450 [Escherichia coli FRIK2001]
gi|408132044|gb|EKH62053.1| hypothetical protein ECPA4_2128 [Escherichia coli PA4]
gi|408144407|gb|EKH73644.1| hypothetical protein ECPA23_2003 [Escherichia coli PA23]
gi|408146388|gb|EKH75525.1| hypothetical protein ECPA49_2150 [Escherichia coli PA49]
gi|408149817|gb|EKH78475.1| hypothetical protein ECPA45_2131 [Escherichia coli PA45]
gi|408160549|gb|EKH88558.1| hypothetical protein ECTT12B_2025 [Escherichia coli TT12B]
gi|408165240|gb|EKH92934.1| hypothetical protein ECMA6_2229 [Escherichia coli MA6]
gi|408167461|gb|EKH94972.1| hypothetical protein EC5905_2156 [Escherichia coli 5905]
gi|408178998|gb|EKI05688.1| hypothetical protein ECCB7326_2043 [Escherichia coli CB7326]
gi|408185534|gb|EKI11706.1| hypothetical protein ECEC96038_1932 [Escherichia coli EC96038]
gi|408185871|gb|EKI11993.1| hypothetical protein EC5412_2031 [Escherichia coli 5412]
gi|408195051|gb|EKI20480.1| hypothetical protein ECTW15901_1596 [Escherichia coli TW15901]
gi|408204022|gb|EKI29023.1| hypothetical protein ECTW00353_1475 [Escherichia coli TW00353]
gi|408215943|gb|EKI40296.1| hypothetical protein EC3006_1609 [Escherichia coli 3006]
gi|408219412|gb|EKI43562.1| hypothetical protein EC07798_1702 [Escherichia coli 07798]
gi|408222525|gb|EKI46382.1| hypothetical protein ECPA38_1978 [Escherichia coli PA38]
gi|408230329|gb|EKI53728.1| hypothetical protein ECN1_1294 [Escherichia coli N1]
gi|408232013|gb|EKI55272.1| hypothetical protein ECEC1735_2045 [Escherichia coli EC1735]
gi|408243653|gb|EKI66165.1| hypothetical protein ECEC1736_1936 [Escherichia coli EC1736]
gi|408246917|gb|EKI69151.1| hypothetical protein ECEC1737_1948 [Escherichia coli EC1737]
gi|408251512|gb|EKI73241.1| hypothetical protein ECEC1846_1933 [Escherichia coli EC1846]
gi|408261439|gb|EKI82425.1| hypothetical protein ECEC1847_1936 [Escherichia coli EC1847]
gi|408264457|gb|EKI85255.1| hypothetical protein ECEC1848_2117 [Escherichia coli EC1848]
gi|408269687|gb|EKI89926.1| hypothetical protein ECEC1849_1902 [Escherichia coli EC1849]
gi|408279640|gb|EKI99240.1| hypothetical protein ECEC1850_2100 [Escherichia coli EC1850]
gi|408281469|gb|EKJ00882.1| hypothetical protein ECEC1856_1928 [Escherichia coli EC1856]
gi|408294438|gb|EKJ12830.1| hypothetical protein ECEC1862_1931 [Escherichia coli EC1862]
gi|408295998|gb|EKJ14274.1| hypothetical protein ECEC1864_2100 [Escherichia coli EC1864]
gi|408312248|gb|EKJ29093.1| hypothetical protein ECEC1868_2133 [Escherichia coli EC1868]
gi|408312484|gb|EKJ29314.1| hypothetical protein ECEC1866_1785 [Escherichia coli EC1866]
gi|408326422|gb|EKJ42230.1| hypothetical protein ECEC1869_2104 [Escherichia coli EC1869]
gi|408329967|gb|EKJ45351.1| hypothetical protein ECNE098_2152 [Escherichia coli NE098]
gi|408330660|gb|EKJ45922.1| hypothetical protein ECEC1870_1822 [Escherichia coli EC1870]
gi|408343073|gb|EKJ57481.1| hypothetical protein ECFRIK523_1987 [Escherichia coli FRIK523]
gi|408345731|gb|EKJ60043.1| hypothetical protein EC01288_1364 [Escherichia coli 0.1288]
gi|408350118|gb|EKJ64020.1| hypothetical protein EC01304_2099 [Escherichia coli 0.1304]
gi|408553806|gb|EKK30877.1| hypothetical protein EC52239_2169 [Escherichia coli 5.2239]
gi|408554647|gb|EKK31574.1| hypothetical protein EC60172_2167 [Escherichia coli 6.0172]
gi|408554761|gb|EKK31683.1| hypothetical protein EC34870_2121 [Escherichia coli 3.4870]
gi|408571082|gb|EKK47037.1| hypothetical protein EC80566_1358 [Escherichia coli 8.0566]
gi|408571701|gb|EKK47629.1| hypothetical protein EC80569_1312 [Escherichia coli 8.0569]
gi|408576865|gb|EKK52449.1| hypothetical protein EC80586_2180 [Escherichia coli 8.0586]
gi|408584123|gb|EKK59159.1| hypothetical protein EC82524_1968 [Escherichia coli 8.2524]
gi|408584202|gb|EKK59237.1| hypothetical protein EC100833_2159 [Escherichia coli 10.0833]
gi|408596970|gb|EKK71064.1| hypothetical protein EC100869_1888 [Escherichia coli 10.0869]
gi|408600840|gb|EKK74662.1| hypothetical protein EC880221_1978 [Escherichia coli 88.0221]
gi|408603109|gb|EKK76771.1| hypothetical protein EC80416_1658 [Escherichia coli 8.0416]
gi|408615078|gb|EKK88313.1| hypothetical protein EC100821_1824 [Escherichia coli 10.0821]
gi|421942183|gb|EKT99538.1| hypothetical protein CFSAN001632_11224 [Escherichia coli O111:H8
str. CFSAN001632]
gi|427210168|gb|EKV80108.1| hypothetical protein EC881042_2094 [Escherichia coli 88.1042]
gi|427211590|gb|EKV81331.1| hypothetical protein EC890511_1950 [Escherichia coli 89.0511]
gi|427211976|gb|EKV81633.1| hypothetical protein EC881467_2063 [Escherichia coli 88.1467]
gi|427229089|gb|EKV97450.1| hypothetical protein EC902281_1982 [Escherichia coli 90.2281]
gi|427229317|gb|EKV97653.1| hypothetical protein EC900091_2262 [Escherichia coli 90.0091]
gi|427230483|gb|EKV98648.1| hypothetical protein EC900039_1848 [Escherichia coli 90.0039]
gi|427246633|gb|EKW13832.1| hypothetical protein EC930056_2134 [Escherichia coli 93.0056]
gi|427247858|gb|EKW14904.1| hypothetical protein EC930055_1925 [Escherichia coli 93.0055]
gi|427249062|gb|EKW15942.1| hypothetical protein EC940618_1914 [Escherichia coli 94.0618]
gi|427265668|gb|EKW31209.1| hypothetical protein EC950943_2128 [Escherichia coli 95.0943]
gi|427266109|gb|EKW31597.1| hypothetical protein EC950183_2088 [Escherichia coli 95.0183]
gi|427267907|gb|EKW33107.1| hypothetical protein EC951288_1861 [Escherichia coli 95.1288]
gi|427281013|gb|EKW45348.1| hypothetical protein EC960428_1960 [Escherichia coli 96.0428]
gi|427284961|gb|EKW48966.1| hypothetical protein EC960427_2008 [Escherichia coli 96.0427]
gi|427286820|gb|EKW50643.1| hypothetical protein EC960939_1977 [Escherichia coli 96.0939]
gi|427297582|gb|EKW60614.1| hypothetical protein EC960932_2097 [Escherichia coli 96.0932]
gi|427302710|gb|EKW65489.1| hypothetical protein EC970003_1883 [Escherichia coli 97.0003]
gi|427303897|gb|EKW66592.1| hypothetical protein EC960107_2003 [Escherichia coli 96.0107]
gi|427317483|gb|EKW79385.1| hypothetical protein EC971742_1614 [Escherichia coli 97.1742]
gi|427318962|gb|EKW80799.1| hypothetical protein EC970007_1610 [Escherichia coli 97.0007]
gi|427324736|gb|EKW86199.1| hypothetical protein EC990672_2016 [Escherichia coli 99.0672]
gi|427331249|gb|EKW92482.1| hypothetical protein EC990678_1912 [Escherichia coli 99.0678]
gi|427331483|gb|EKW92709.1| hypothetical protein EC990713_1964 [Escherichia coli 99.0713]
gi|429256562|gb|EKY40729.1| hypothetical protein EC960109_2104 [Escherichia coli 96.0109]
gi|429258148|gb|EKY42056.1| hypothetical protein EC970010_1995 [Escherichia coli 97.0010]
gi|429349014|gb|EKY85769.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02030]
gi|429358086|gb|EKY94756.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429359490|gb|EKY96155.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02092]
gi|429369234|gb|EKZ05815.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02093]
gi|429371944|gb|EKZ08494.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02281]
gi|429373894|gb|EKZ10434.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02318]
gi|429379619|gb|EKZ16118.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-02913]
gi|429383999|gb|EKZ20456.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-03439]
gi|429389288|gb|EKZ25709.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-03943]
gi|429395275|gb|EKZ31642.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429400520|gb|EKZ36835.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
11-04080]
gi|429405612|gb|EKZ41877.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429416135|gb|EKZ52292.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429416683|gb|EKZ52835.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429417307|gb|EKZ53457.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422061|gb|EKZ58182.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429425873|gb|EKZ61962.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429438889|gb|EKZ74881.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429441707|gb|EKZ77675.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429448682|gb|EKZ84591.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429450570|gb|EKZ86464.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453273|gb|EKZ89141.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430876717|gb|ELC00224.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE2]
gi|430878458|gb|ELC01882.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE4]
gi|430886835|gb|ELC09663.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE10]
gi|430887623|gb|ELC10364.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE5]
gi|430899682|gb|ELC21775.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE12]
gi|430908117|gb|ELC29610.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE16]
gi|430909758|gb|ELC31123.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE15]
gi|430916645|gb|ELC37705.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE25]
gi|430920437|gb|ELC41324.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE21]
gi|430926380|gb|ELC46967.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE26]
gi|430931408|gb|ELC51860.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE28]
gi|430935970|gb|ELC56264.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE39]
gi|430940986|gb|ELC61145.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE44]
gi|430945792|gb|ELC65858.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE178]
gi|430954538|gb|ELC73408.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE187]
gi|430957149|gb|ELC75803.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE181]
gi|430963486|gb|ELC81071.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE188]
gi|430967720|gb|ELC85067.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE189]
gi|430971878|gb|ELC88877.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE193]
gi|430974433|gb|ELC91366.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE191]
gi|430983816|gb|ELD00472.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE201]
gi|430989934|gb|ELD06380.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE204]
gi|430994638|gb|ELD10960.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE205]
gi|430999011|gb|ELD15209.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE206]
gi|431007412|gb|ELD22224.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE208]
gi|431008544|gb|ELD23344.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE210]
gi|431017092|gb|ELD30608.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE212]
gi|431022060|gb|ELD35330.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE213]
gi|431025407|gb|ELD38511.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE214]
gi|431030440|gb|ELD43454.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE216]
gi|431040907|gb|ELD51441.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE220]
gi|431043412|gb|ELD53744.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE224]
gi|431052660|gb|ELD62308.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE228]
gi|431053606|gb|ELD63211.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE230]
gi|431055787|gb|ELD65325.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE233]
gi|431062132|gb|ELD71410.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE234]
gi|431071009|gb|ELD79165.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE235]
gi|431075455|gb|ELD82975.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE236]
gi|431082943|gb|ELD89254.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE237]
gi|431086065|gb|ELD92169.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE47]
gi|431092470|gb|ELD98166.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE49]
gi|431101498|gb|ELE06414.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE53]
gi|431106799|gb|ELE10988.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE56]
gi|431109391|gb|ELE13349.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE55]
gi|431117152|gb|ELE20415.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE57]
gi|431121359|gb|ELE24254.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE58]
gi|431131289|gb|ELE33368.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE60]
gi|431139526|gb|ELE41322.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE67]
gi|431142708|gb|ELE44456.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE66]
gi|431149749|gb|ELE50814.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE72]
gi|431156100|gb|ELE56841.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE75]
gi|431160641|gb|ELE61143.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE76]
gi|431164788|gb|ELE65179.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE77]
gi|431171402|gb|ELE71577.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE80]
gi|431172715|gb|ELE72819.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE81]
gi|431181893|gb|ELE81754.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE86]
gi|431182834|gb|ELE82650.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE83]
gi|431192485|gb|ELE91835.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE87]
gi|431193156|gb|ELE92493.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE93]
gi|431201169|gb|ELE99886.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE111]
gi|431202471|gb|ELF01157.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE116]
gi|431212079|gb|ELF10028.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE119]
gi|431216245|gb|ELF13884.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE142]
gi|431222249|gb|ELF19531.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE143]
gi|431223296|gb|ELF20548.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE156]
gi|431228040|gb|ELF25163.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE161]
gi|431235493|gb|ELF30744.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE162]
gi|431245045|gb|ELF39342.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE171]
gi|431245290|gb|ELF39584.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE169]
gi|431250866|gb|ELF44925.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE6]
gi|431258095|gb|ELF50881.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE8]
gi|431264759|gb|ELF56462.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE9]
gi|431266761|gb|ELF58296.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE17]
gi|431275170|gb|ELF66215.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE18]
gi|431277130|gb|ELF68145.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE45]
gi|431284887|gb|ELF75735.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE42]
gi|431285660|gb|ELF76496.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE23]
gi|431292893|gb|ELF83275.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE43]
gi|431298268|gb|ELF87901.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE29]
gi|431304111|gb|ELF92645.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE22]
gi|431310465|gb|ELF98657.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE46]
gi|431311696|gb|ELF99844.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE48]
gi|431316768|gb|ELG04567.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE50]
gi|431319771|gb|ELG07441.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE54]
gi|431327637|gb|ELG14958.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE59]
gi|431330611|gb|ELG17878.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE63]
gi|431338824|gb|ELG25895.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE65]
gi|431340449|gb|ELG27477.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE78]
gi|431344627|gb|ELG31565.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE79]
gi|431349662|gb|ELG36491.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE84]
gi|431355729|gb|ELG42424.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE91]
gi|431363772|gb|ELG50318.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE101]
gi|431365833|gb|ELG52337.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE115]
gi|431369754|gb|ELG55975.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE118]
gi|431373894|gb|ELG59497.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE123]
gi|431377930|gb|ELG62922.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE135]
gi|431386149|gb|ELG70106.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE136]
gi|431390387|gb|ELG74090.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE140]
gi|431395984|gb|ELG79472.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE141]
gi|431401167|gb|ELG84519.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE144]
gi|431403154|gb|ELG86436.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE147]
gi|431407080|gb|ELG90299.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE146]
gi|431412142|gb|ELG95227.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE154]
gi|431417931|gb|ELH00359.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE158]
gi|431423406|gb|ELH05533.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE165]
gi|431428866|gb|ELH10807.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE192]
gi|431434006|gb|ELH15659.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE194]
gi|431442264|gb|ELH23369.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE190]
gi|431445730|gb|ELH26653.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE173]
gi|431447008|gb|ELH27751.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE175]
gi|431454323|gb|ELH34700.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE184]
gi|431459842|gb|ELH40132.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE196]
gi|431465265|gb|ELH45376.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE183]
gi|431469081|gb|ELH49013.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE197]
gi|431473356|gb|ELH53190.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE203]
gi|431476658|gb|ELH56446.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE202]
gi|431481480|gb|ELH61194.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE209]
gi|431484518|gb|ELH64198.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE207]
gi|431493684|gb|ELH73278.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE211]
gi|431497257|gb|ELH76835.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE217]
gi|431502530|gb|ELH81421.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE215]
gi|431509237|gb|ELH87508.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE218]
gi|431511921|gb|ELH90050.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE223]
gi|431515807|gb|ELH93622.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE227]
gi|431524552|gb|ELI01493.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE229]
gi|431533017|gb|ELI09520.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE104]
gi|431534868|gb|ELI11257.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE105]
gi|431538634|gb|ELI14618.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE106]
gi|431544437|gb|ELI19257.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE109]
gi|431553026|gb|ELI26961.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE113]
gi|431557405|gb|ELI31116.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE112]
gi|431558383|gb|ELI32004.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE117]
gi|431572744|gb|ELI45569.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE124]
gi|431573511|gb|ELI46309.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE122]
gi|431584969|gb|ELI56929.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE125]
gi|431587798|gb|ELI59149.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE128]
gi|431590676|gb|ELI61683.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE129]
gi|431598894|gb|ELI68680.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE131]
gi|431604135|gb|ELI73545.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE133]
gi|431607866|gb|ELI77220.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE137]
gi|431612276|gb|ELI81524.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE138]
gi|431618130|gb|ELI87108.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE139]
gi|431621090|gb|ELI89910.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE145]
gi|431629715|gb|ELI98074.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE150]
gi|431631595|gb|ELI99901.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE148]
gi|431636032|gb|ELJ04200.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE153]
gi|431646237|gb|ELJ13736.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE157]
gi|431648070|gb|ELJ15470.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE160]
gi|431649665|gb|ELJ17010.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE163]
gi|431659817|gb|ELJ26706.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE166]
gi|431663148|gb|ELJ29911.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE167]
gi|431664098|gb|ELJ30839.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE168]
gi|431673550|gb|ELJ39771.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE174]
gi|431676398|gb|ELJ42517.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE176]
gi|431680277|gb|ELJ46134.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE177]
gi|431690313|gb|ELJ55796.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE179]
gi|431690997|gb|ELJ56459.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE180]
gi|431694812|gb|ELJ60156.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE232]
gi|431707439|gb|ELJ71973.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE88]
gi|431707735|gb|ELJ72267.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE82]
gi|431709995|gb|ELJ74430.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE85]
gi|431718745|gb|ELJ82815.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE90]
gi|431723842|gb|ELJ87786.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE94]
gi|431724162|gb|ELJ88102.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE95]
gi|431731597|gb|ELJ95097.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE97]
gi|431735403|gb|ELJ98762.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE99]
gi|432346907|gb|ELL41372.1| hypothetical protein B185_014133 [Escherichia coli J96]
gi|443421864|gb|AGC86768.1| hypothetical protein APECO78_10195 [Escherichia coli APEC O78]
gi|444540714|gb|ELV20345.1| hypothetical protein EC990814_1748 [Escherichia coli 99.0814]
gi|444544415|gb|ELV23470.1| hypothetical protein EC09BKT78844_2085 [Escherichia coli
09BKT078844]
gi|444549660|gb|ELV27885.1| hypothetical protein EC990815_1611 [Escherichia coli 99.0815]
gi|444560998|gb|ELV38131.1| hypothetical protein EC990839_1712 [Escherichia coli 99.0839]
gi|444562858|gb|ELV39895.1| hypothetical protein EC990816_1692 [Escherichia coli 99.0816]
gi|444567329|gb|ELV44094.1| hypothetical protein EC990848_1734 [Escherichia coli 99.0848]
gi|444577477|gb|ELV53603.1| hypothetical protein EC991753_1773 [Escherichia coli 99.1753]
gi|444580991|gb|ELV56869.1| hypothetical protein EC991775_1702 [Escherichia coli 99.1775]
gi|444582945|gb|ELV58701.1| hypothetical protein EC991793_1826 [Escherichia coli 99.1793]
gi|444596708|gb|ELV71755.1| hypothetical protein ECPA11_1764 [Escherichia coli PA11]
gi|444596812|gb|ELV71858.1| hypothetical protein ECATCC700728_1691 [Escherichia coli ATCC
700728]
gi|444600837|gb|ELV75655.1| hypothetical protein EC991805_1629 [Escherichia coli 99.1805]
gi|444610393|gb|ELV84802.1| hypothetical protein ECPA13_1492 [Escherichia coli PA13]
gi|444610577|gb|ELV84984.1| hypothetical protein ECPA19_1728 [Escherichia coli PA19]
gi|444618407|gb|ELV92485.1| hypothetical protein ECPA2_1876 [Escherichia coli PA2]
gi|444628000|gb|ELW01745.1| hypothetical protein ECPA47_1675 [Escherichia coli PA47]
gi|444628498|gb|ELW02236.1| hypothetical protein ECPA48_1584 [Escherichia coli PA48]
gi|444633162|gb|ELW06702.1| hypothetical protein ECPA8_1776 [Escherichia coli PA8]
gi|444643228|gb|ELW16393.1| hypothetical protein EC71982_1895 [Escherichia coli 7.1982]
gi|444645831|gb|ELW18880.1| hypothetical protein EC991781_1877 [Escherichia coli 99.1781]
gi|444648591|gb|ELW21508.1| hypothetical protein EC991762_1890 [Escherichia coli 99.1762]
gi|444657942|gb|ELW30405.1| hypothetical protein ECPA35_1914 [Escherichia coli PA35]
gi|444663696|gb|ELW35905.1| hypothetical protein EC34880_1702 [Escherichia coli 3.4880]
gi|444669835|gb|ELW41785.1| hypothetical protein EC950083_1741 [Escherichia coli 95.0083]
gi|444672057|gb|ELW43815.1| hypothetical protein EC990670_1949 [Escherichia coli 99.0670]
gi|449320370|gb|EMD10402.1| hypothetical protein C202_06018 [Escherichia coli O08]
gi|449323073|gb|EMD13045.1| hypothetical protein C201_05760 [Escherichia coli S17]
gi|449323224|gb|EMD13189.1| hypothetical protein A364_07067 [Escherichia coli SEPT362]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|410640482|ref|ZP_11351014.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
chathamensis S18K6]
gi|410648840|ref|ZP_11359237.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
agarilytica NO2]
gi|410131602|dbj|GAC07636.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
agarilytica NO2]
gi|410140015|dbj|GAC09201.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
chathamensis S18K6]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ EL+ G V V PTD+ Y+I C + +A+E++ RI+ + +++
Sbjct: 9 PDNPQTRLIKQACELIHSGEVVVYPTDSGYSIGCHMDDKNALEQICRIRQIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y R D FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEYA----RVDNAA----FRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+R+P++AI A+L+++ P++ST++ + DP I D + + +
Sbjct: 113 NPKRRTIGIRVPDNAIALALLEELGEPMMSTTLILPNEIVAESDPDEIRDKLEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TVVD++ P IIRQG G
Sbjct: 172 IHGGFLGEQPTTVVDLSEGEPVIIRQGSG 200
>gi|417712145|ref|ZP_12361139.1| yrdC domain protein [Shigella flexneri K-272]
gi|417716735|ref|ZP_12365661.1| yrdC domain protein [Shigella flexneri K-227]
gi|333007604|gb|EGK27082.1| yrdC domain protein [Shigella flexneri K-272]
gi|333019538|gb|EGK38818.1| yrdC domain protein [Shigella flexneri K-227]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKVEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGSYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|407957197|dbj|BAM50437.1| hypothetical protein BEST7613_1506 [Bacillus subtilis BEST7613]
Length = 181
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 19/187 (10%)
Query: 31 PTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHAN 90
PTDT+YAI CDL +A++R+R++K + +KPL+ LC SL +I Y +
Sbjct: 4 PTDTVYAIGCDLNDKNAVQRVRQLKQLSNNKPLTFLCSSLSNIAEYAV--------VADD 55
Query: 91 IFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKM 150
+R ++ +PGPYTF+L A+K+VPK V RK G+R+P+ ICQ ILQ +
Sbjct: 56 AYRLMRKLIPGPYTFLLPATKQVPKLVVE--------PKRKTTGIRVPDRPICQEILQSL 107
Query: 151 DAPLISTSVKWLKDNEW-MVDPVVIADTYGPEGLDFVVDGGVRVA-EPSTVVDMTGTYPK 208
P+ISTS +E+ M + + D + + +D ++D + S+++D T PK
Sbjct: 108 GNPIISTSAHLPDQDEFVMAEKAKLFDLFD-KLVDIIIDDDREPGYQTSSIIDFTDKEPK 166
Query: 209 IIRQGKG 215
++R+G G
Sbjct: 167 VVREGLG 173
>gi|260854965|ref|YP_003228856.1| hypothetical protein ECO26_1832 [Escherichia coli O26:H11 str.
11368]
gi|415790594|ref|ZP_11495152.1| yrdC domain protein [Escherichia coli EPECa14]
gi|419208960|ref|ZP_13752062.1| yrdC domain protein [Escherichia coli DEC8C]
gi|419215178|ref|ZP_13758193.1| yrdC domain protein [Escherichia coli DEC8D]
gi|419254412|ref|ZP_13796940.1| yrdC domain protein [Escherichia coli DEC10A]
gi|419260618|ref|ZP_13803050.1| yrdC domain protein [Escherichia coli DEC10B]
gi|419266654|ref|ZP_13809021.1| yrdC domain protein [Escherichia coli DEC10C]
gi|419272044|ref|ZP_13814354.1| yrdC domain protein [Escherichia coli DEC10D]
gi|419878457|ref|ZP_14399925.1| hypothetical protein ECO9534_23744 [Escherichia coli O111:H11 str.
CVM9534]
gi|419879518|ref|ZP_14400950.1| hypothetical protein ECO9545_30478 [Escherichia coli O111:H11 str.
CVM9545]
gi|419900712|ref|ZP_14420137.1| hypothetical protein ECO9942_00260 [Escherichia coli O26:H11 str.
CVM9942]
gi|419908787|ref|ZP_14427455.1| hypothetical protein ECO10026_27847 [Escherichia coli O26:H11 str.
CVM10026]
gi|420104920|ref|ZP_14615523.1| hypothetical protein ECO9455_27537 [Escherichia coli O111:H11 str.
CVM9455]
gi|420106654|ref|ZP_14617050.1| hypothetical protein ECO9553_20879 [Escherichia coli O111:H11 str.
CVM9553]
gi|420114319|ref|ZP_14623995.1| hypothetical protein ECO10021_05332 [Escherichia coli O26:H11 str.
CVM10021]
gi|420118697|ref|ZP_14628017.1| hypothetical protein ECO10030_11410 [Escherichia coli O26:H11 str.
CVM10030]
gi|420125438|ref|ZP_14634251.1| hypothetical protein ECO10224_02794 [Escherichia coli O26:H11 str.
CVM10224]
gi|420132794|ref|ZP_14641108.1| hypothetical protein ECO9952_23746 [Escherichia coli O26:H11 str.
CVM9952]
gi|424751710|ref|ZP_18179737.1| hypothetical protein CFSAN001629_17082 [Escherichia coli O26:H11
str. CFSAN001629]
gi|424765320|ref|ZP_18192720.1| hypothetical protein CFSAN001630_24972 [Escherichia coli O111:H11
str. CFSAN001630]
gi|425378863|ref|ZP_18763032.1| hypothetical protein ECEC1865_1978 [Escherichia coli EC1865]
gi|257753614|dbj|BAI25116.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|323153301|gb|EFZ39559.1| yrdC domain protein [Escherichia coli EPECa14]
gi|378057219|gb|EHW19453.1| yrdC domain protein [Escherichia coli DEC8C]
gi|378065136|gb|EHW27285.1| yrdC domain protein [Escherichia coli DEC8D]
gi|378103069|gb|EHW64740.1| yrdC domain protein [Escherichia coli DEC10A]
gi|378109821|gb|EHW71421.1| yrdC domain protein [Escherichia coli DEC10B]
gi|378114053|gb|EHW75611.1| yrdC domain protein [Escherichia coli DEC10C]
gi|378119911|gb|EHW81399.1| yrdC domain protein [Escherichia coli DEC10D]
gi|388334925|gb|EIL01503.1| hypothetical protein ECO9534_23744 [Escherichia coli O111:H11 str.
CVM9534]
gi|388371155|gb|EIL34645.1| hypothetical protein ECO9545_30478 [Escherichia coli O111:H11 str.
CVM9545]
gi|388374383|gb|EIL37541.1| hypothetical protein ECO10026_27847 [Escherichia coli O26:H11 str.
CVM10026]
gi|388377544|gb|EIL40346.1| hypothetical protein ECO9942_00260 [Escherichia coli O26:H11 str.
CVM9942]
gi|394395329|gb|EJE71801.1| hypothetical protein ECO10224_02794 [Escherichia coli O26:H11 str.
CVM10224]
gi|394401167|gb|EJE77013.1| hypothetical protein ECO9455_27537 [Escherichia coli O111:H11 str.
CVM9455]
gi|394409804|gb|EJE84264.1| hypothetical protein ECO10021_05332 [Escherichia coli O26:H11 str.
CVM10021]
gi|394415391|gb|EJE89258.1| hypothetical protein ECO9553_20879 [Escherichia coli O111:H11 str.
CVM9553]
gi|394428016|gb|EJF00625.1| hypothetical protein ECO9952_23746 [Escherichia coli O26:H11 str.
CVM9952]
gi|394432688|gb|EJF04755.1| hypothetical protein ECO10030_11410 [Escherichia coli O26:H11 str.
CVM10030]
gi|408299960|gb|EKJ17714.1| hypothetical protein ECEC1865_1978 [Escherichia coli EC1865]
gi|421936544|gb|EKT94206.1| hypothetical protein CFSAN001630_24972 [Escherichia coli O111:H11
str. CFSAN001630]
gi|421939371|gb|EKT96899.1| hypothetical protein CFSAN001629_17082 [Escherichia coli O26:H11
str. CFSAN001629]
Length = 206
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDKPVVVREGVG 200
>gi|387606848|ref|YP_006095704.1| hypothetical protein EC042_1392 [Escherichia coli 042]
gi|416896749|ref|ZP_11926596.1| yrdC domain protein [Escherichia coli STEC_7v]
gi|417112901|ref|ZP_11964821.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 1.2741]
gi|422781863|ref|ZP_16834648.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TW10509]
gi|422802843|ref|ZP_16851335.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M863]
gi|284921148|emb|CBG34214.1| conserved hypothetical protein [Escherichia coli 042]
gi|323964604|gb|EGB60077.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli M863]
gi|323977102|gb|EGB72189.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli TW10509]
gi|327253957|gb|EGE65586.1| yrdC domain protein [Escherichia coli STEC_7v]
gi|386142511|gb|EIG83649.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli 1.2741]
Length = 206
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVLREGVG 200
>gi|197117703|ref|YP_002138130.1| tRNA (N6-threonylcarbamoyl-A37) modification ATPase [Geobacter
bemidjiensis Bem]
gi|197087063|gb|ACH38334.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
bemidjiensis Bem]
Length = 202
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 20/222 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + VVE+LK G V PTDT Y I C + S IER+ ++K +
Sbjct: 1 MLLEINPDNPQPRLVAKVVEILKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQVKQRDRK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C + +I Y + F+ ++ LPGPYTF+L A+ VP
Sbjct: 61 KPFSFICSDISEISRY--------ARVSNYAFKQLRRLLPGPYTFVLEANSVVPD----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K ++ VG+R+P++ IC AI++++ P+++TS L + + +P + G
Sbjct: 108 -LVTTK---QRTVGIRMPDNNICLAIVKELGHPIVTTSAN-LSGEDPIGNPWQVEHELG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ LD VVDGG A+ S+VV + G P+++R+G G + W E
Sbjct: 162 KLLDLVVDGGDLSADVSSVVSLIGDSPELLRKGVG-DVSWCE 202
>gi|333900194|ref|YP_004474067.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fulva 12-X]
gi|333115459|gb|AEF21973.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fulva 12-X]
Length = 208
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ V++++ G V V PTD+ YA+ C + + SA+ER+RR++ ++
Sbjct: 4 FFQIHPESPQARLIKQAVDIIRNGGVVVYPTDSSYAVGCQMGAKSAMERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L + T+ + FR +K+ PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSQLSTF--------AKVDTAAFRLLKNHTPGPYTFILNATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L+++ P++S S+ ++ M DP + +
Sbjct: 113 -----HPKRRTIGLRVPSHPIAAALLEELGEPMMSVSLILPGEDLPMSDPYEMRQMLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STV+ + P++IR G G
Sbjct: 168 -VDLIIDGGFGGLEASTVIGLVDDEPEVIRVGCG 200
>gi|352105406|ref|ZP_08960772.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. HAL1]
gi|350598476|gb|EHA14595.1| Sua5/YciO/YrdC/YwlC [Halomonas sp. HAL1]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ + ++++G V PTD+ YA+ C L AIE+++ +++++
Sbjct: 4 YFQIHPENPQKRLIDQAIAIIRKGGVVAYPTDSGYALGCHLGEKKAIEKIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + ++FR +K PGPYT+IL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNDVFRLLKAHTPGPYTYILDATSEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L + PL+S ++ + D+ M DP I + +G
Sbjct: 113 -----HPKRRSIGVRVPDHRITHALLAALGEPLMSVTLIPVGDDFPMNDPEEIRERFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG +P++V+D+ P IIR+G+G
Sbjct: 168 -LDAIIDGGACHLDPTSVIDLRELPPTIIREGRG 200
>gi|109899136|ref|YP_662391.1| Sua5/YciO/YrdC/YwlC family protein [Pseudoalteromonas atlantica
T6c]
gi|109701417|gb|ABG41337.1| translation factor SUA5 [Pseudoalteromonas atlantica T6c]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ EL+ G V V PTD+ Y+I C + SA+E++ RI+ + +++
Sbjct: 9 PDNPQARLIKQACELIHNGQVVVYPTDSGYSIGCHMDDKSALEQICRIRQIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y Q FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEY--------AQVDNAAFRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+R+P++AI A+L+++ PL+ST++ DP I D + + +
Sbjct: 113 NPKRRTIGIRVPDNAIALALLEELGEPLMSTTLILPNAIVAESDPDEIRDKLEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D++ P IIR+G G
Sbjct: 172 IHGGFLGEQPTTVIDLSDGEPTIIREGSG 200
>gi|332307257|ref|YP_004435108.1| Sua5/YciO/YrdC/YwlC family protein [Glaciecola sp. 4H-3-7+YE-5]
gi|332174586|gb|AEE23840.1| Sua5/YciO/YrdC/YwlC family protein [Glaciecola sp. 4H-3-7+YE-5]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ EL+ G V V PTD+ Y+I C + +A+E++ RI+ + +++
Sbjct: 9 PDNPQTRLIKQACELIHSGEVVVYPTDSGYSIGCHMDDKNALEQICRIRQIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y R D FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEYA----RVDNAA----FRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+R+P++AI A+L+++ P++ST++ + DP I D + + +
Sbjct: 113 NPKRRTIGIRVPDNAIALALLEELGEPMMSTTLILPSEIVAESDPDEIRDKLEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TVVD++ P IIRQG G
Sbjct: 172 IHGGFLGEQPTTVVDLSEGEPVIIRQGSG 200
>gi|261340037|ref|ZP_05967895.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter cancerogenus ATCC
35316]
gi|288317957|gb|EFC56895.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter cancerogenus ATCC
35316]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + ++
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVEL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDAPEVIREGVG 200
>gi|421729206|ref|ZP_16168356.1| hypothetical protein KOXM_28840 [Klebsiella oxytoca M5al]
gi|410370301|gb|EKP25032.1| hypothetical protein KOXM_28840 [Klebsiella oxytoca M5al]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+N+ +++
Sbjct: 9 PENPQARLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRNLPNGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ +
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLL------- 112
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ + DP I D + +D
Sbjct: 113 -LEKRKTIGMRVPSNPIAQMLLETLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDAPIVVREGVG 200
>gi|421650873|ref|ZP_16091246.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC0162]
gi|445457647|ref|ZP_21446635.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC047]
gi|408509638|gb|EKK11309.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC0162]
gi|444776264|gb|ELX00310.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC047]
Length = 205
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VVE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQVVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRRGVG 199
>gi|28898727|ref|NP_798332.1| translation factor [Vibrio parahaemolyticus RIMD 2210633]
gi|153839753|ref|ZP_01992420.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus AQ3810]
gi|260363729|ref|ZP_05776505.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus K5030]
gi|260877277|ref|ZP_05889632.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus
AN-5034]
gi|260897776|ref|ZP_05906272.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus
Peru-466]
gi|260903496|ref|ZP_05911891.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus AQ4037]
gi|417319519|ref|ZP_12106077.1| putative translation factor [Vibrio parahaemolyticus 10329]
gi|433658061|ref|YP_007275440.1| YciO family [Vibrio parahaemolyticus BB22OP]
gi|28806945|dbj|BAC60216.1| putative translation factor [Vibrio parahaemolyticus RIMD 2210633]
gi|149746720|gb|EDM57708.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus AQ3810]
gi|308087594|gb|EFO37289.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus
Peru-466]
gi|308090289|gb|EFO39984.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus
AN-5034]
gi|308106751|gb|EFO44291.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus AQ4037]
gi|308114914|gb|EFO52454.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus K5030]
gi|328474709|gb|EGF45514.1| putative translation factor [Vibrio parahaemolyticus 10329]
gi|432508749|gb|AGB10266.1| YciO family [Vibrio parahaemolyticus BB22OP]
Length = 206
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEISLYA----RVDNGA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+PN+ I +L+ + PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPNNQIALDLLEALGEPLMSTSLILPGSDVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + P+++R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVIDFSEGEPEVVRIGSG 200
>gi|444920767|ref|ZP_21240606.1| YciO [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507987|gb|ELV08160.1| YciO [Wohlfahrtiimonas chitiniclastica SH04]
Length = 205
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 16/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + + VE+L+ G + + PTD+ Y+ C L + S +ER+R+I+ V+
Sbjct: 1 MILHIHPDNPQARLINQAVEILRAGGIVIYPTDSSYSFCCMLGNQSGMERIRQIREVDDD 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S++CR L ++ TY + +R ++ LPG YTFIL SK++PKK +
Sbjct: 61 HFFSLVCRDLSELATY--------AMVDNSQYRLLRAVLPGAYTFILKGSKDIPKKLL-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K RK +G+R+P I Q +L+ + PL+ST+V + + + +
Sbjct: 111 ---TPK---RKTIGLRVPKHKITQDLLEALGEPLLSTTVTLPNYSAEDLREIYQIEDLLE 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++D G P+TV+D+T P+IIR+G+G
Sbjct: 165 KRVDAIIDAGDCSHLPTTVIDLTSGVPEIIREGEG 199
>gi|372220931|ref|ZP_09499352.1| hypothetical protein MzeaS_01365 [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 206
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 20/207 (9%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRS 69
D K+ +V +L++G + + PTDT+Y + CD+ + A+E++ RIK V+ +K S +C
Sbjct: 13 DPRKIARIVNVLRKGGLIIYPTDTVYGLGCDITNSRALEKIARIKGVKLAKANWSFICPD 72
Query: 70 LRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSL 129
L ++ Y Q + F+ +K LPGPYTFIL S +PK +
Sbjct: 73 LSNLSDYIK-------QIDTSTFKILKRALPGPYTFILPGSNNLPK----------DFKK 115
Query: 130 RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGLDFVVD 188
+K VG+R+P++ I + I+ ++ P++STS++ D E+ DP +I + + +D V+D
Sbjct: 116 KKTVGIRVPDNTIAKTIVTELGNPIVSTSIRDDDDILEYTTDPELILEKWN-NLVDIVID 174
Query: 189 GGVRVAEPSTVVDMTGTYPKIIRQGKG 215
GG ST++D++ P +IR+GKG
Sbjct: 175 GGYGDNIASTIIDLSEGEPVVIREGKG 201
>gi|421655923|ref|ZP_16096237.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-72]
gi|408506946|gb|EKK08650.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-72]
Length = 205
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL+A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILSATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRRGVG 199
>gi|261343645|ref|ZP_05971290.1| Sua5/YciO/YrdC/YwlC family protein [Providencia rustigianii DSM
4541]
gi|282568028|gb|EFB73563.1| Sua5/YciO/YrdC/YwlC family protein [Providencia rustigianii DSM
4541]
Length = 206
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++L +G V V PTD+ YAI C L+ A++R+ RI+ ++ + +++
Sbjct: 9 PDNPQARLISQSVDILNKGGVVVYPTDSGYAIGCRLEDKDALQRICRIRQLDANHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L +I Y +FR +K+ PG YTFIL +KEVP++ +
Sbjct: 69 CRDLSEISNY--------AHVDNTVFRLIKNNTPGNYTFILKGTKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+P++ I + +L+ + PL+STS+ D+ DP I D + +D V
Sbjct: 114 -EKKKTIGLRVPSNPIARDLLEAVGEPLMSTSLILPGDDFTQSDPEEIRDLLDKQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D T P ++R G G
Sbjct: 172 IHGGYIGQKPTTVIDFTDDVPVVVRVGTG 200
>gi|402700574|ref|ZP_10848553.1| hypothetical protein PfraA_12122 [Pseudomonas fragi A22]
Length = 209
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++K+G V + PTD+ YA+ C + AIER++R++N++
Sbjct: 4 FFQIHPENPQPRLIKQAVEIIKKGGVVIYPTDSSYALGCQMGDKHAIERIKRLRNLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + +FR +K PGPYTFIL A+++VP+ +
Sbjct: 64 NFTLMCCDLSQLGLF--------AKVETGVFRLLKAHTPGPYTFILNATRDVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I A+L+++ PL+S ++ + E M DP I D +
Sbjct: 113 -----HPKRRTIGVRVPSHPIALALLEELREPLMSVTLILPGEKEPMEDPYEIRDALEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+ + P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGNKASTVISLIDLEPEVVRVGCGDPTPFMVE 208
>gi|313200705|ref|YP_004039363.1| sua5/ycio/yrdc/ywlc family protein [Methylovorus sp. MP688]
gi|312440021|gb|ADQ84127.1| Sua5/YciO/YrdC/YwlC family protein [Methylovorus sp. MP688]
Length = 209
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + VE+L+ G V PTD+ YA+ C + + A +R+R I+ V+
Sbjct: 4 YFVLHPQNPQPRLIAQAVEILRNGGVVAYPTDSSYALGCVVGNKDAQDRIRAIRGVDDDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR+L ++ Y Q + FR +K PG YTFIL A++EVP++
Sbjct: 64 LFTLVCRNLSELAVY--------AQVDNSQFRLLKANTPGQYTFILKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ R +G+R+P+ A+ QA+L+ +D PL+S S++ + + + + I D +
Sbjct: 112 ----QHPKRSTLGLRVPDHAVTQALLEALDEPLLSMSLQLPGEEDVLNEAWEIRDRLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L V+D G A P+TV+D+TG P ++R G G
Sbjct: 168 -LGLVIDAGACSATPTTVIDLTGDSPILVRAGAG 200
>gi|282895924|ref|ZP_06303964.1| Sua5/YciO/YrdC/YwlC [Raphidiopsis brookii D9]
gi|281199169|gb|EFA74038.1| Sua5/YciO/YrdC/YwlC [Raphidiopsis brookii D9]
Length = 219
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 32/226 (14%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + ++E + L GAV + PTDT+YAI CDL + SA+ER+++IK + KP
Sbjct: 5 LEIHPDNPQNRRIEDIRLALSGGAVMLYPTDTVYAIGCDLNAKSAVERVKKIKRLANDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ LC SL + TY +R +K +PGPYTF+L A+K VP+
Sbjct: 65 LTFLCPSLSRVATYAFVSDMA--------YRIMKSLIPGPYTFLLPATKLVPR------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW----LKDNEWMVDPVVI---A 175
+ RK G+R+PN +C A+L+ + P+ISTS + D VD ++
Sbjct: 110 -LVQNPKRKTTGIRVPNHHLCLALLESLGNPIISTSAHLPRHDMDDLNVDVDTDMLPSKM 168
Query: 176 DTYGPEG--LDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
D + G +D ++D G EP ST++D+T P I R+G G
Sbjct: 169 DLFNRLGSLVDIIIDTG---EEPKNQVSTILDLTDNQPIITRKGMG 211
>gi|339999556|ref|YP_004730439.1| hypothetical protein SBG_1583 [Salmonella bongori NCTC 12419]
gi|339512917|emb|CCC30661.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 206
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++AI A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNAIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDAPVVLREGVG 200
>gi|330823716|ref|YP_004387019.1| Sua5/YciO/YrdC/YwlC family protein [Alicycliphilus denitrificans
K601]
gi|329309088|gb|AEB83503.1| Sua5/YciO/YrdC/YwlC family protein [Alicycliphilus denitrificans
K601]
Length = 211
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
L+ LL G + VPTD+ YA+VC L A++R+RR++ + L++LCR L ++
Sbjct: 17 LKQAAALLSGGGILAVPTDSSYALVCRLDDKDAVDRIRRVRQINDKHHLTLLCRDLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
+Y R +R +K PGPYTF+L A+KEVP++ + RK +G
Sbjct: 77 SYAHVDNRQ--------YRLLKLATPGPYTFLLDATKEVPRRV--------SHPQRKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P+ Q +L+ PL++T++ + E + DP I + Y + +D ++D G
Sbjct: 121 LRVPDRKGLQMLLELHGTPLLATTLIPAGEAEPLNDPQEIRERYEKQ-IDGIIDAGACPL 179
Query: 195 EPSTVVDM----TGTYPKIIRQGKG 215
EP+TV+D+ TG P ++R+G+G
Sbjct: 180 EPTTVLDLTPMSTGGDPVVVREGRG 204
>gi|239501228|ref|ZP_04660538.1| yrdC domain protein [Acinetobacter baumannii AB900]
gi|421677205|ref|ZP_16117098.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC111]
gi|410393483|gb|EKP45836.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC111]
Length = 205
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL+A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILSATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRRGVG 199
>gi|253701566|ref|YP_003022755.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M21]
gi|251776416|gb|ACT18997.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M21]
Length = 202
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 20/222 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P + VVE+LK G V PTDT Y I C + S IER+ ++K +
Sbjct: 1 MLLEINPDNPQPRLVAKVVEVLKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQVKQRDRK 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KP S +C + +I Y + F+ ++ LPGPYTF+L A+ VP
Sbjct: 61 KPFSFICSDISEISRY--------ARVSNYAFKQLRRLLPGPYTFVLEANSVVPD----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
T K ++ VG+R+P++ IC AI++++ P+++TS L + + +P + G
Sbjct: 108 -LVTTK---QRTVGIRMPDNNICLAIVKELGHPIVTTSAN-LSGEDPIGNPWQVEHELG- 161
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWME 222
+ LD VVDGG A+ S+VV + G P+++R+G G + W E
Sbjct: 162 KLLDLVVDGGDLSADVSSVVSLIGDSPELLRKGVG-DVSWCE 202
>gi|296102093|ref|YP_003612239.1| hypothetical protein ECL_01732 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056552|gb|ADF61290.1| hypothetical protein ECL_01732 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 206
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKAAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + ++
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVEL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTEDAPEVIREGVG 200
>gi|452748211|ref|ZP_21947993.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri NF13]
gi|452007929|gb|EME00180.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri NF13]
Length = 207
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAVGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTAAFRLLKAHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ ++ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLEELGEPLMSVSLILPGEDLPMSDPYEMRDVLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV + P+++R G G
Sbjct: 168 -VDLIIDGGYGGLEASTVVSLVDDRPEVVRVGCG 200
>gi|409422669|ref|ZP_11259757.1| hypothetical protein PsHYS_11324 [Pseudomonas sp. HYS]
Length = 209
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 115/205 (56%), Gaps = 17/205 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE++++G V V PTD+ YA+ C + +A+ER+RR++ ++ + +++C L + +
Sbjct: 21 VEIIRKGGVVVYPTDSSYAMGCQIGDKNAVERVRRLRQLDKNHNFTLICCDLSQMGLF-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ FR +K +PGPYTFIL A++EVP+ + + R+ +G+R+P
Sbjct: 79 ------AKIDTATFRLLKAHVPGPYTFILNATREVPRLLL--------HEKRRTIGLRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+++ PL+S S+ ++E M DP I +D ++DGG + ST
Sbjct: 125 SNPIALALLEELGEPLMSVSLIMPGEDEPMTDPYEIRQAL-EHHVDLIIDGGFGDLKAST 183
Query: 199 VVDMTGTYPKIIRQGKGPKLYWMEE 223
V+ + G P++IR G G +M E
Sbjct: 184 VISLAGDEPEVIRVGCGDPAPFMVE 208
>gi|152969813|ref|YP_001334922.1| hypothetical protein KPN_01259 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238894321|ref|YP_002919055.1| hypothetical protein KP1_2300 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262043011|ref|ZP_06016154.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330002627|ref|ZP_08304382.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. MS 92-3]
gi|365142164|ref|ZP_09347475.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. 4_1_44FAA]
gi|378978324|ref|YP_005226465.1| hypothetical protein KPHS_21650 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386034450|ref|YP_005954363.1| hypothetical protein KPN2242_09430 [Klebsiella pneumoniae KCTC
2242]
gi|402781170|ref|YP_006636716.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419975446|ref|ZP_14490856.1| hypothetical protein KPNIH1_18883 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981317|ref|ZP_14496594.1| hypothetical protein KPNIH2_19558 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419986562|ref|ZP_14501693.1| hypothetical protein KPNIH4_16859 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992213|ref|ZP_14507171.1| hypothetical protein KPNIH5_16174 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419998563|ref|ZP_14513349.1| hypothetical protein KPNIH6_18933 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004425|ref|ZP_14519062.1| hypothetical protein KPNIH7_19497 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010171|ref|ZP_14524647.1| hypothetical protein KPNIH8_19227 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016329|ref|ZP_14530622.1| hypothetical protein KPNIH9_20970 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021716|ref|ZP_14535893.1| hypothetical protein KPNIH10_19516 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027211|ref|ZP_14541206.1| hypothetical protein KPNIH11_17865 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033157|ref|ZP_14546965.1| hypothetical protein KPNIH12_18878 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039513|ref|ZP_14553146.1| hypothetical protein KPNIH14_22365 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044719|ref|ZP_14558196.1| hypothetical protein KPNIH16_19555 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420050671|ref|ZP_14563968.1| hypothetical protein KPNIH17_20509 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055958|ref|ZP_14569120.1| hypothetical protein KPNIH18_18498 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420060861|ref|ZP_14573856.1| hypothetical protein KPNIH19_14616 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420067569|ref|ZP_14580360.1| hypothetical protein KPNIH20_19379 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073062|ref|ZP_14585693.1| hypothetical protein KPNIH21_18009 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078848|ref|ZP_14591301.1| hypothetical protein KPNIH22_17822 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420083695|ref|ZP_14595971.1| hypothetical protein KPNIH23_13366 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421917852|ref|ZP_16347397.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424830248|ref|ZP_18254976.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424933875|ref|ZP_18352247.1| Hypothetical protein B819_27961 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425077107|ref|ZP_18480210.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425081089|ref|ZP_18484186.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425087740|ref|ZP_18490833.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425091149|ref|ZP_18494234.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428147924|ref|ZP_18995826.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428932636|ref|ZP_19006209.1| hypothetical protein MTE1_07751 [Klebsiella pneumoniae JHCK1]
gi|428938241|ref|ZP_19011371.1| hypothetical protein MTE2_01952 [Klebsiella pneumoniae VA360]
gi|449047985|ref|ZP_21731063.1| hypothetical protein G057_04753 [Klebsiella pneumoniae hvKP1]
gi|150954662|gb|ABR76692.1| hypothetical protein KPN_01259 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546637|dbj|BAH62988.1| hypothetical protein KP1_2300 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039613|gb|EEW40741.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537247|gb|EGF63508.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. MS 92-3]
gi|339761578|gb|AEJ97798.1| hypothetical protein KPN2242_09430 [Klebsiella pneumoniae KCTC
2242]
gi|363652267|gb|EHL91309.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. 4_1_44FAA]
gi|364517735|gb|AEW60863.1| hypothetical protein KPHS_21650 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397343089|gb|EJJ36240.1| hypothetical protein KPNIH1_18883 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397343615|gb|EJJ36759.1| hypothetical protein KPNIH2_19558 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397347783|gb|EJJ40888.1| hypothetical protein KPNIH4_16859 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397360098|gb|EJJ52781.1| hypothetical protein KPNIH6_18933 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397361455|gb|EJJ54117.1| hypothetical protein KPNIH5_16174 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397365813|gb|EJJ58434.1| hypothetical protein KPNIH7_19497 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397375151|gb|EJJ67454.1| hypothetical protein KPNIH9_20970 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397379359|gb|EJJ71555.1| hypothetical protein KPNIH8_19227 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397386497|gb|EJJ78575.1| hypothetical protein KPNIH10_19516 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397393755|gb|EJJ85503.1| hypothetical protein KPNIH11_17865 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397395705|gb|EJJ87406.1| hypothetical protein KPNIH12_18878 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403072|gb|EJJ94661.1| hypothetical protein KPNIH14_22365 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397410773|gb|EJK02046.1| hypothetical protein KPNIH17_20509 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397411227|gb|EJK02487.1| hypothetical protein KPNIH16_19555 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421176|gb|EJK12206.1| hypothetical protein KPNIH18_18498 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427876|gb|EJK18632.1| hypothetical protein KPNIH20_19379 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397432376|gb|EJK23038.1| hypothetical protein KPNIH19_14616 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438378|gb|EJK28883.1| hypothetical protein KPNIH21_18009 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444360|gb|EJK34639.1| hypothetical protein KPNIH22_17822 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450926|gb|EJK41020.1| hypothetical protein KPNIH23_13366 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402542064|gb|AFQ66213.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405592816|gb|EKB66268.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405602519|gb|EKB75642.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405604464|gb|EKB77585.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405613306|gb|EKB86054.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407808062|gb|EKF79313.1| Hypothetical protein B819_27961 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410119820|emb|CCM90022.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414707673|emb|CCN29377.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426306027|gb|EKV68137.1| hypothetical protein MTE2_01952 [Klebsiella pneumoniae VA360]
gi|426306861|gb|EKV68954.1| hypothetical protein MTE1_07751 [Klebsiella pneumoniae JHCK1]
gi|427542168|emb|CCM91964.1| YciO family [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448877171|gb|EMB12140.1| hypothetical protein G057_04753 [Klebsiella pneumoniae hvKP1]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSDFTESDPEEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGFLGQQPTTVIDLTEDTPVVLREGVG 200
>gi|333983863|ref|YP_004513073.1| Sua5/YciO/YrdC/YwlC family protein [Methylomonas methanica MC09]
gi|333807904|gb|AEG00574.1| Sua5/YciO/YrdC/YwlC family protein [Methylomonas methanica MC09]
Length = 207
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++E P + ++ V +++ G V V PTD YA+ + A++ +RRI+ ++ +
Sbjct: 4 FLEIHPQNPQTRLIQQAVNIIRNGGVIVYPTDASYALGAQIGDKQAMDTIRRIRRLDDNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LC L + T+T + H R +K+ PGP+TF+L A++EVP++
Sbjct: 64 NFTLLCNDLSQVSTFT----KMGNDAH----RLIKNLTPGPFTFLLDATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K +GVRI ++ I +A+L+++ PL++T++ +E M DP I E
Sbjct: 112 ----QHPKKKTIGVRITDNNIARALLEQLGEPLLTTTMILPGQDEAMADPYDIRQKLDRE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++DGG+ +P+TV+ +I+RQG G
Sbjct: 168 -LDLIIDGGIIDYKPTTVIACIDNVIEIVRQGIG 200
>gi|206575970|ref|YP_002239002.1| hypothetical protein KPK_3176 [Klebsiella pneumoniae 342]
gi|288935910|ref|YP_003439969.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella variicola At-22]
gi|290512944|ref|ZP_06552308.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. 1_1_55]
gi|206565028|gb|ACI06804.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella pneumoniae 342]
gi|288890619|gb|ADC58937.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella variicola At-22]
gi|289774557|gb|EFD82561.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella sp. 1_1_55]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSDFTESDPEEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGFLGQQPTTVIDLTEDTPVVLREGVG 200
>gi|366159149|ref|ZP_09459011.1| hypothetical protein ETW09_09395 [Escherichia sp. TW09308]
gi|432372446|ref|ZP_19615491.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE11]
gi|430896939|gb|ELC19166.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE11]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEVLGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|399520792|ref|ZP_10761564.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399111281|emb|CCH38123.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 222
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 18 FFQVHPENPQARLIKQAVEIIRGGGVVVYPTDSSYALGCMIGDKNAVERIRRLRQLDDKH 77
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L I + + FR +K+ PGPYTFIL A++EVP+ +
Sbjct: 78 NFTLVCRDLSQIGLF--------AKVDTAAFRLLKNHTPGPYTFILNATREVPRMLL--- 126
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L+++ PL+S S+ D M DP +
Sbjct: 127 -----HPKRRTIGIRVPSHPIALALLEQLGEPLMSVSLIMPGDELPMSDPYEMRQIL-EH 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV++ P+++R G G
Sbjct: 181 HVDLIIDGGFGGLEASTVVNLADDSPEVLRVGCG 214
>gi|440287829|ref|YP_007340594.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacteriaceae bacterium
strain FGI 57]
gi|440047351|gb|AGB78409.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacteriaceae bacterium
strain FGI 57]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDAPVVLREGVG 200
>gi|303257826|ref|ZP_07343836.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderiales bacterium
1_1_47]
gi|302859429|gb|EFL82510.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderiales bacterium
1_1_47]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E +LL +G V V TDT +++VC L A++++R I+ + K ++
Sbjct: 9 PESPQPHRIEQAAKLLTKGQVAAVSTDTGFSLVCRLDDKEALDKIRLIRQLSEKKHFTLF 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL + + R + G +R K PGPYTFIL A+KEVP++
Sbjct: 69 CDSLSQM----SKLARVNNTG----YRMAKSVTPGPYTFILEATKEVPRRL--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ +K +G+R+P++ A+L+K+ PL+ T+V + E + I D G + L F+
Sbjct: 113 HPSKKTIGLRVPSNKALHALLEKIGEPLVGTTVIMPGEEEPLSSAWEIQDRIGDQ-LAFI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D G V +TVVD++G P++IR+G G
Sbjct: 172 LDDGTSVIGDTTVVDLSGDEPEVIREGLG 200
>gi|436838193|ref|YP_007323409.1| Sua5/YciO/YrdC/YwlC family protein [Fibrella aestuarina BUZ 2]
gi|384069606|emb|CCH02816.1| Sua5/YciO/YrdC/YwlC family protein [Fibrella aestuarina BUZ 2]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 120/220 (54%), Gaps = 27/220 (12%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+V+ P D ++ V L++GAV + PTDT+Y + CD+ + A+ER+ RIK ++P K
Sbjct: 5 FVKIYPKNPDMNRIRQVASALRDGAVVIYPTDTIYGMGCDIHNARAVERVARIKGIKPQK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L I Y + + F+ +K LPGPYT IL A+ +VPK
Sbjct: 65 NDFSFICYDLSHIADY--------ARVSNSAFKLMKRLLPGPYTVILEANNQVPKLL--- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-----EWMVDPVVIA 175
S +K VG+R+P++ I + ++ ++ P+I+T+ L+D E+ DP +I
Sbjct: 114 ------NSSKKTVGIRVPDNDIPRQLVHELGNPIITTT---LRDEEPGTVEYSTDPELIF 164
Query: 176 DTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ Y + +D V+DGG+ PSTV+D T ++IR G G
Sbjct: 165 EKYRHD-VDIVIDGGIGGYVPSTVIDATTDDFEVIRLGLG 203
>gi|440740874|ref|ZP_20920346.1| hypothetical protein A986_21195 [Pseudomonas fluorescens BRIP34879]
gi|447918056|ref|YP_007398624.1| hypothetical protein H045_15315 [Pseudomonas poae RE*1-1-14]
gi|440375564|gb|ELQ12268.1| hypothetical protein A986_21195 [Pseudomonas fluorescens BRIP34879]
gi|445201919|gb|AGE27128.1| hypothetical protein H045_15315 [Pseudomonas poae RE*1-1-14]
Length = 209
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + SA+ER+RR+++++ +
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRAGGVVIYPTDSSYAIGCQIGDKSAVERVRRLRDLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KVDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P I A+L ++ PL+S S+ D E + DP + +
Sbjct: 113 -----HPKKRTIGLRVPEHPIALALLAELGEPLMSVSLIMPGDTEPLEDPYEMRQLLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGGKASTVINLADGEPQVVRVGCGDPTPFMVE 208
>gi|372269740|ref|ZP_09505788.1| putative translation factor [Marinobacterium stanieri S30]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 17/219 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD YA+ C L A++R++RI+N++
Sbjct: 4 FFQVHPENPQKRLIQQAVEIIRSGGVVIYPTDCAYAVGCHLGDKKAVDRIKRIRNLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L I TY + D Q FR +K PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLVCDDLSAISTYA----KVDNQ----TFRLLKAHTPGAYTFILPATTEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P++ I +L + P++STS+ + + DP + D +
Sbjct: 113 -----HPKRRTIGIRVPDNPIVAELLSYLGEPIMSTSLIMPGEELPLTDPYEMRDLLQHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYW 220
+D ++DGG E ++V++MT P++ R+G G ++
Sbjct: 168 -VDLIIDGGYCGMEATSVINMTEEVPQVTREGAGDTQFF 205
>gi|257094541|ref|YP_003168182.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047065|gb|ACV36253.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+ P + L+ E++ +G V +PTD+ YA+ C L +A+ER+R ++ V+
Sbjct: 4 YLSIHPENPQARLLQRAAEVIGQGGVIALPTDSSYALGCQLGDKAAVERIRSLRGVDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++CR L I F R D +R +K PG YTFIL ++E+P++ +
Sbjct: 64 HLTLMCRDLSQIGQ----FARVDNAR----YRLLKATTPGSYTFILEGTRELPRRVL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P + A+L ++ PL+++++ D+E + + I D +
Sbjct: 113 -----HPKRKTIGLRVPAHVVTLALLAQLGEPLLTSTLIVAGDDEPLTEAWEIRDRLDAQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ ++DGG EP++VVD+TG P ++R G G
Sbjct: 168 -LELILDGGRCGVEPTSVVDLTGQLPVLVRAGLG 200
>gi|418292208|ref|ZP_12904158.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379063641|gb|EHY76384.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 17/220 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAVGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTAAFRLLKAHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ + M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLEELGEPLMSVSLILPGEELPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+D ++DGG E STVV + P+++R G G +M
Sbjct: 168 -VDLIIDGGYGGLEASTVVSLVDDQPEVVRVGCGDPAPFM 206
>gi|255535332|ref|YP_003095703.1| Sua5 YciO YrdC YwlC family protein [Flavobacteriaceae bacterium
3519-10]
gi|255341528|gb|ACU07641.1| Sua5 YciO YrdC YwlC family protein [Flavobacteriaceae bacterium
3519-10]
Length = 205
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 24/213 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSI 65
P+ ++ VV+ L+ G + + P+DT+YA+ C++ A+E+L +IK ++ K SI
Sbjct: 11 PNNPQENLIDEVVKTLQNGGIIIYPSDTVYALGCNIFDIRAMEKLAQIKKIKLEKAQFSI 70
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L + +GF R +FR +K +PGP+TFIL A K +P
Sbjct: 71 ICNDL----GHLSGFTR---PIDTPVFRFLKSKIPGPFTFILEAGKSLP----------L 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEG 182
Y K VG+R+P+ I Q I++K+ P+ STSVK D+ E+ DP +IA+ Y
Sbjct: 114 AYKGNKTVGIRVPDHVIPQLIVEKLGHPIASTSVK--DDDEVIEYSTDPELIAEKYD-NL 170
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G ST+VD+T P+I+RQGKG
Sbjct: 171 VDIVIDSGYGDNVASTIVDLTSGEPEIVRQGKG 203
>gi|311107775|ref|YP_003980628.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter xylosoxidans A8]
gi|310762464|gb|ADP17913.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter xylosoxidans A8]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y + P+ L+ + L +G + VPTD+ YA+V L +A + LRR++ ++
Sbjct: 3 LYFDIHPANPQPRLLKQAAQWLADGGLVAVPTDSSYAVVARLDDKNAADGLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEIGH----FARVDNRQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ +L+++ APL+ST++ + E + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDHAVMLGLLEQVGAPLLSTTLIPKDEAEALNDAEEIRERYDH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G P+TV+D+T P ++R G+G
Sbjct: 167 D-LAAIIDAGACPQSPTTVIDLTSEEPVVVRVGRG 200
>gi|421617412|ref|ZP_16058401.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri KOS6]
gi|409780567|gb|EKN60194.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri KOS6]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAVGCSIGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTAAFRLLKAHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ ++ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLEELGEPLMSVSLILPGEDLPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG E STVV + P+++R G G
Sbjct: 168 -VDLIIDGGYGGLEASTVVSLVDDRPEVVRVGCG 200
>gi|443314505|ref|ZP_21044059.1| Sua5/YciO/YrdC/YwlC family protein [Leptolyngbya sp. PCC 6406]
gi|442785904|gb|ELR95690.1| Sua5/YciO/YrdC/YwlC family protein [Leptolyngbya sp. PCC 6406]
Length = 220
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 45/232 (19%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P K++ V + L++GAV + PTDT+YAI CDL +A++R+R++K++ K
Sbjct: 4 FYKIHPDSPQRRKIDAVRDALRQGAVILYPTDTVYAIGCDLSDKAAVQRVRQLKSLANEK 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
PL+ LC SL +I Y + +R ++ +PGPYTF+L ASK+VPK +
Sbjct: 64 PLTFLCSSLSNIAAY--------AEVTDPAYRIIRRLIPGPYTFLLPASKQVPKLVMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
R+ G+R+P+ AICQ +L + P+ISTS L + + +GPE
Sbjct: 114 ------PKRRTTGIRVPDHAICQGLLSALGNPIISTSALSL-----------LGEDHGPE 156
Query: 182 GLDFVVDGGVRVAEP-----------------STVVDMTGT-YPKIIRQGKG 215
G + ST++D+T T P ++RQG G
Sbjct: 157 GATHASKAELFDRVGGQVDVVVDDDRDLSYGLSTILDLTATDVPLLVRQGLG 208
>gi|329957163|ref|ZP_08297730.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides clarus YIT 12056]
gi|328523431|gb|EGF50530.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides clarus YIT 12056]
Length = 204
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 22/204 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V+++L +G + + PTDT+YAI C AIER+ ++KN++P K LSI+C L I
Sbjct: 15 LQQVIDILNDGGIIIYPTDTMYAIGCHGLKERAIERICQLKNIDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKFDNNTFKLMKRNLPGAFTFILNGTVRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKW--LKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P++ I Q + + +DAP+++T++ + +D E+ DP +I + +G +D V+DGG+
Sbjct: 117 GIRMPDNPIIQELARLLDAPIMTTTLPYDENEDIEYCTDPELIDEKFG-NIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKG 215
E ST+V+ T +I+RQGKG
Sbjct: 176 GGIEGSTIVNCTNGEAEIVRQGKG 199
>gi|114562608|ref|YP_750121.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella frigidimarina NCIMB
400]
gi|114333901|gb|ABI71283.1| translation factor SUA5 [Shewanella frigidimarina NCIMB 400]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+ V +LK+G V V PTD+ YA+ C + +A+ R+ RI+ +E S++CR L ++
Sbjct: 17 INQAVAILKQGGVIVYPTDSGYALGCMIGEKNAMTRMARIRQIENDTNFSLMCRDLSEL- 75
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
F R D Q +R +K C+PGPYTFI A+KEVP++ + ++ +G
Sbjct: 76 ---ANFARVDNQA----YRLLKSCMPGPYTFIFKATKEVPRRL--------QCDKKRTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+PN+ I A+L+ + P+++TS+ + DP I D +D ++ GG
Sbjct: 121 IRVPNNIIALALLEALGEPMMTTSLVMPNEQFAESDPEHIRDILD-HLVDGIIHGGYLPE 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+TV+DM+ I+R G G
Sbjct: 180 NQTTVIDMSEDEMVILRHGAG 200
>gi|146306866|ref|YP_001187331.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina ymp]
gi|145575067|gb|ABP84599.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina ymp]
Length = 222
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 18 FFQVHPENPQARLIKQAVEIIRSGGVVVYPTDSSYALGCAIGDKNAVERIRRLRQLDDKH 77
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L I + + FR +K+ PGPYTFIL A++EVP+ +
Sbjct: 78 NFTLVCRDLSQIGLF--------AKVDTAAFRLLKNHTPGPYTFILNATREVPRMLL--- 126
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L+++ PL+S S+ D M DP + +
Sbjct: 127 -----HPKRRTIGLRVPSHPIALALLEQLGEPLMSVSLILPGDELPMSDPYEMRQILEHQ 181
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG E STVV++ P+I+R G G
Sbjct: 182 -VELIIDGGFGGLEASTVVNLADDTPEILRVGCG 214
>gi|423119901|ref|ZP_17107585.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5246]
gi|376397263|gb|EHT09897.1| Sua5/YciO/YrdC/YwlC family protein [Klebsiella oxytoca 10-5246]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKLVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDAPVVLREGVG 200
>gi|423093947|ref|ZP_17081743.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens Q2-87]
gi|397887209|gb|EJL03692.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens Q2-87]
Length = 209
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRSGGVVVYPTDSAYAIGCQIGDKNAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ + E M DP I +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGETEPMTDPYEIRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGMKASTVINLADGEPQVVRVGCGDPAPFMAE 208
>gi|124007775|ref|ZP_01692477.1| Sua5/YciO/YrdC/YwlC family protein [Microscilla marina ATCC 23134]
gi|123986721|gb|EAY26502.1| Sua5/YciO/YrdC/YwlC family protein [Microscilla marina ATCC 23134]
Length = 209
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 120/220 (54%), Gaps = 25/220 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS--KPLS 64
P + K+ VVE L+ G V + PTDT+Y + CD+ + A+E++ +IK + P K LS
Sbjct: 10 PDNPEMRKISQVVECLRSGGVIIYPTDTVYGLGCDIHNQKAVEKICQIKKINPKKRKNLS 69
Query: 65 ILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTT 124
+C L I Y G+A F+ +K LPGPYTFIL S VPK
Sbjct: 70 FICNDLSHIAEYAR-------IGNAT-FKLMKKALPGPYTFILETSSRVPK--------I 113
Query: 125 AKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNE---WMVDPVVIADTYGPE 181
S +K+VG+RIP++ I + I++++ P+I++SV L ++E ++ DP I + Y
Sbjct: 114 LNIS-KKNVGIRIPDNNIARLIVKELGNPIITSSV--LAEDEVVKYLTDPEDIYEQY-KH 169
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+D V+DGG ST++D + ++RQG G + ++
Sbjct: 170 KVDLVIDGGNGSNVGSTIIDCSDDNVTVLRQGAGDIMQFI 209
>gi|431927030|ref|YP_007240064.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri RCH2]
gi|431825317|gb|AGA86434.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas stutzeri RCH2]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + + + IER+RR++ ++
Sbjct: 4 FFQIHPDNPQPRLIKQAVEIIRKGGVVVYPTDSSYAVGCSMGNKAGIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++ CR L + + + FR +K LPGPYT IL+A++EVP+ +
Sbjct: 64 NFTLACRDLSQLGLFA--------KVDTAAFRLLKAHLPGPYTIILSATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I QA+L+++ PL+S S+ M DP + D +
Sbjct: 113 -----HPKRRTIGLRVPAQPIAQALLEELGEPLMSVSLILPGQELPMSDPYEMRDALEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+D ++DGG E STVV + P+++R G G +M
Sbjct: 168 -VDLIIDGGYGGVEASTVVSLVDDQPEVVRVGCGDPAPFM 206
>gi|421503634|ref|ZP_15950580.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina DLHK]
gi|400345461|gb|EJO93825.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas mendocina DLHK]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YA+ C + +A+ER+RR++ ++
Sbjct: 4 FFQVHPENPQARLIKQAVEIIRSGGVVVYPTDSSYALGCAIGDKNAVERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L I + + FR +K+ PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLVCRDLSQIGLF--------AKVDTAAFRLLKNHTPGPYTFILNATREVPRMLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L+++ PL+S S+ D M DP + +
Sbjct: 113 -----HPKRRTIGLRVPSHPIALALLEQLGEPLMSVSLILPGDELPMSDPYEMRQILEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ ++DGG E STVV++ P+I+R G G
Sbjct: 168 -VELIIDGGFGGLEASTVVNLADDTPEILRVGCG 200
>gi|421483023|ref|ZP_15930601.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter piechaudii HLE]
gi|400198687|gb|EJO31645.1| Sua5/YciO/YrdC/YwlC family protein [Achromobacter piechaudii HLE]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+Y+ P+ L+ + L +G + VPTD+ YA+V L A + LRR++ ++
Sbjct: 3 LYLSIHPANPQPRLLKQAAQWLNDGGLVAVPTDSSYAVVARLDDKDAADGLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I F R D + +R +K PGP+TFIL A+KEVP++
Sbjct: 63 HHLTLLCRDLAEI----GHFARVDNKQ----YRLLKAATPGPWTFILEATKEVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ +L+++ APL+ST++ D + + D I + Y
Sbjct: 112 -----SHPSRKTIGIRVPDHAVMLGLLEQVGAPLLSTTLIPKDDTQALNDAEDIRERYDH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L ++D G P+TV+D+T P ++R G+G
Sbjct: 167 D-LAAIIDAGACPQSPTTVIDLTSDDPVVVRVGRG 200
>gi|183219444|ref|YP_001837440.1| hypothetical protein LEPBI_I0017 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909589|ref|YP_001961144.1| SUA5 family translation factor [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774265|gb|ABZ92566.1| Translation factor, SUA5 family [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777866|gb|ABZ96164.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 210
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 17/218 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + KL+ + + LK+GA+ + PTDT+YAI+ D S +A+E++ IK +
Sbjct: 1 MILYLHPDNPEVRKLKQISDRLKDGAIYIFPTDTVYAIIADANSKTAVEKIYSIKKLPKD 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLS+LCR + + P + +R +K PGP+TF+L A+K +PK + +
Sbjct: 61 KPLSLLCRDISMASHFIEYLPN-------SAYRFMKRMTPGPFTFVLKANKNLPKPSIAH 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
K +G+RIP+ Q +L+ D+PL STS D+E+++D + YG
Sbjct: 114 HKD-------KQIGIRIPDHIYLQELLKIHDSPLTSTSA--FSDDEFIIDIDDLESIYG- 163
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKL 218
+D ++DGG+ E ST++ + ++IR GKG +L
Sbjct: 164 NLVDGIIDGGIVKIELSTMIQIHDDSLELIRAGKGYEL 201
>gi|334124342|ref|ZP_08498351.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter hormaechei ATCC
49162]
gi|365970811|ref|YP_004952371.1| protein YciO [Enterobacter cloacae EcWSU1]
gi|392979414|ref|YP_006478002.1| hypothetical protein A3UG_12860 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|401678286|ref|ZP_10810253.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter sp. SST3]
gi|401763962|ref|YP_006578969.1| hypothetical protein ECENHK_12420 [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|419956873|ref|ZP_14472939.1| hypothetical protein PGS1_02360 [Enterobacter cloacae subsp.
cloacae GS1]
gi|333389341|gb|EGK60507.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter hormaechei ATCC
49162]
gi|365749724|gb|AEW73951.1| YciO [Enterobacter cloacae EcWSU1]
gi|388607031|gb|EIM36235.1| hypothetical protein PGS1_02360 [Enterobacter cloacae subsp.
cloacae GS1]
gi|392325347|gb|AFM60300.1| hypothetical protein A3UG_12860 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|400175496|gb|AFP70345.1| hypothetical protein ECENHK_12420 [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400214497|gb|EJO45416.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter sp. SST3]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + ++
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVEL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTEDAPEVIREGVG 200
>gi|299771354|ref|YP_003733380.1| yrdC domain-containing protein [Acinetobacter oleivorans DR1]
gi|298701442|gb|ADI92007.1| yrdC domain protein [Acinetobacter oleivorans DR1]
Length = 205
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M++ P + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 MHLHVHPENPQQRLISQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+LQ++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLQELGEPLLTSTLILPGQEDPLDDPYDIENQLD- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTSTSIVDLSGEHPEIIRRGIG 199
>gi|225024541|ref|ZP_03713733.1| hypothetical protein EIKCOROL_01416 [Eikenella corrodens ATCC
23834]
gi|224942692|gb|EEG23901.1| hypothetical protein EIKCOROL_01416 [Eikenella corrodens ATCC
23834]
Length = 206
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ E++++G V V PTD+ YA+ C + + A+ER+ I+ ++
Sbjct: 4 FFAIHPENPQERLVKQAAEIVRQGGVIVYPTDSCYALGCQMGNKEAMERILAIRQIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + + FR +K PG YTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNSQFRQLKAATPGAYTFILPATKEVPNRTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P++ I A+L ++ P++S ++ ++ E DP I +
Sbjct: 113 -----HPKRKTIGLRVPDNKIALALLAELGEPMLSCTLMLPEETEPQTDPYEIRNLL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D ++DGG EP+TV+DMT GT ++IRQG G
Sbjct: 167 AVDLIIDGGWCGTEPTTVIDMTNGT--ELIRQGAG 199
>gi|271500650|ref|YP_003333675.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya dadantii Ech586]
gi|270344205|gb|ACZ76970.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya dadantii Ech586]
Length = 206
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L++ V V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++
Sbjct: 9 PQNPQPRLINQTVEILRKSGVIVYPTDSGYALGCMLEDKAAMERICRIRELDQNHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ +Y FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSSY--------AYVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L ++ PL+ST++ ++ DP I + G + +D +
Sbjct: 114 -DKRKTIGMRVPSNPIALDLLSVLNEPLMSTTLMLPGNDFAESDPEEIQEQLG-KRVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+D+T P ++R+G G
Sbjct: 172 IHGGFLGQQPTTVIDLTEDVPVVVREGTG 200
>gi|198245890|ref|YP_002215421.1| hypothetical protein SeD_A1608 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197940406|gb|ACH77739.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
Length = 206
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ L + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLLGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|325103134|ref|YP_004272788.1| Sua5/YciO/YrdC/YwlC family protein [Pedobacter saltans DSM 12145]
gi|324971982|gb|ADY50966.1| Sua5/YciO/YrdC/YwlC family protein [Pedobacter saltans DSM 12145]
Length = 206
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 116/209 (55%), Gaps = 23/209 (11%)
Query: 11 DSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRS 69
+ +++ VV++LK+G + + PTDT+Y + CD+ + AIE++ ++K ++P K S +C
Sbjct: 11 NEKQVQQVVDILKKGGIIIYPTDTIYGMGCDITNQKAIEKIAQLKGIKPEKANFSFVCHD 70
Query: 70 LRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSL 129
L I Y + FR +K LPG +TFI A+ VPK S
Sbjct: 71 LSHISQYVKPLDN-------STFRLLKKALPGAFTFIFEANSNVPKLLA---------SK 114
Query: 130 RKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEGLDFV 186
+K VG+R+P++ I + I++ + P++STS++ D+ E+ DP +I + Y + +D V
Sbjct: 115 KKTVGIRVPDNNIAREIVRMLGNPILSTSIR--DDDEIIEYSTDPELIYEKY-KDLVDVV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
VDGG STVVD T +I+RQG G
Sbjct: 172 VDGGYGNNVASTVVDCTEGDFEIVRQGLG 200
>gi|300114807|ref|YP_003761382.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus watsonii C-113]
gi|299540744|gb|ADJ29061.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosococcus watsonii C-113]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P+ L L++ + V PTD+ YA+ C + + +A +R+R+++ +
Sbjct: 4 YFRIHPANPQQRLLNQAASFLRQEGLIVYPTDSGYALGCQVGNKAAADRIRQLRGLGNRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S++ R L ++ Y + + FR +K PG YTFI A++EVP++
Sbjct: 64 EFSLVSRDLSELSLY--------AKVGNSAFRLLKALTPGAYTFIFKATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P + + QA+L + PLIS+++ ++ + DP I D G +
Sbjct: 112 ----QDPKRRTIGIRVPANTVTQALLTTLGEPLISSTLILPGEDIPLTDPEEIRDRMGGQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG EP+TVVD+ PK+IR+GKG
Sbjct: 168 -VDLIIDGGYCGFEPTTVVDLVEDMPKVIREGKG 200
>gi|169634119|ref|YP_001707855.1| hypothetical protein ABSDF2646 [Acinetobacter baumannii SDF]
gi|169152911|emb|CAP01952.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 205
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGGPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRHGVG 199
>gi|121595728|ref|YP_987624.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. JS42]
gi|120607808|gb|ABM43548.1| Sua5/YciO/YrdC/YwlC family protein [Acidovorax sp. JS42]
Length = 211
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
L+ LL G + VPTD+ YA+VC L A++++RRI+ + L++LCR L ++
Sbjct: 17 LKQAATLLSSGGILAVPTDSSYALVCRLDDKDAVDQIRRIRQINDKHHLTLLCRDLSELA 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
Y R +R +K PGPYTFIL A+KEVP++ + RK +G
Sbjct: 77 NYAHVDNRQ--------YRLLKLATPGPYTFILDATKEVPRRV--------SHPQRKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P+ Q +L+ APL++T++ ++E + DP I + + + LD ++D G
Sbjct: 121 LRVPDRKGLQMLLELHGAPLLATTLIPAGESEPLNDPQEIRERFEKQ-LDGILDAGGCPL 179
Query: 195 EPSTVVDM----TGTYPKIIRQGKG 215
EP+TV+D+ TG P ++R+G G
Sbjct: 180 EPTTVLDLTPMNTGGDPIVVREGGG 204
>gi|421787480|ref|ZP_16223832.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-82]
gi|410407005|gb|EKP58994.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-82]
Length = 205
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPAQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRHGVG 199
>gi|421554246|ref|ZP_16000194.1| hypothetical protein NMEN98008_0486 [Neisseria meningitidis 98008]
gi|402333516|gb|EJU68819.1| hypothetical protein NMEN98008_0486 [Neisseria meningitidis 98008]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 22/211 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++ L+++
Sbjct: 9 PDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKHHLTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 69 CADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPTRTL------- 112
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I D +D
Sbjct: 113 -HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRDRL-EHAVDL 170
Query: 186 VVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 171 VIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|392551777|ref|ZP_10298914.1| RNA binding protein [Pseudoalteromonas spongiae UST010723-006]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V+++++G V V PTD+ YAI C + + +A+ER+ RI+ +E
Sbjct: 4 FFHIHPENPQARLVRQAVDMIQQGKVIVFPTDSGYAIGCSIGNKNAMERIARIRGLEKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D ++FR +K+ PG YTFI +KEVP++ +
Sbjct: 64 NFTLVCRDLSELATYA----RVDN----SLFRLIKNNTPGQYTFIFKGTKEVPRRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+P+ I QAIL ++ PL+S S+ + DP I +
Sbjct: 114 ------EKKKTIGIRVPDHIITQAILAELGEPLMSCSLILPGEQFAEADPEEIRFQLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GG +P+TVVD + +IIR G G
Sbjct: 168 -VDLIIHGGYLSEQPTTVVDFSEDTVEIIRVGAG 200
>gi|311279824|ref|YP_003942055.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter cloacae SCF1]
gi|308749019|gb|ADO48771.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter cloacae SCF1]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLEAIGEPMLSTSLMLPGSDFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDAPVVLREGVG 200
>gi|293609079|ref|ZP_06691382.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425625|ref|ZP_18915709.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-136]
gi|292829652|gb|EFF88014.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697488|gb|EKU67160.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-136]
Length = 205
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M++ P + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 MHLHVHPENPQQRLIAQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+LQ++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLQELGEPLLTSTLILPGQEDPLDDPYDIENQLD- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTSTSIVDLSGEHPEIIRRGVG 199
>gi|50084077|ref|YP_045587.1| hypothetical protein ACIAD0865 [Acinetobacter sp. ADP1]
gi|49530053|emb|CAG67765.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 211
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD Y+I C + + SA+ER+ +I+ + P
Sbjct: 8 LHLHIHPDNPQARLINQAVERIRAGDVVVYPTDAAYSIGCQIGNKSAMERIAQIRGLGPK 67
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K P TFIL A+ EVPK+ +
Sbjct: 68 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKANTPSITTFILPATSEVPKRLM-- 117
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP + ICQA+LQ++ P++++++ ++ + DP I + G
Sbjct: 118 ------HPKKKTIGLRIPTNPICQALLQELGEPILTSTLILPGQSDPLDDPYDIENQLG- 170
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G P+++R G G
Sbjct: 171 KRVDVFIDGGFGTLSTTSIVDLSGENPEVVRHGAG 205
>gi|237807720|ref|YP_002892160.1| Sua5/YciO/YrdC/YwlC family protein [Tolumonas auensis DSM 9187]
gi|237499981|gb|ACQ92574.1| Sua5/YciO/YrdC/YwlC family protein [Tolumonas auensis DSM 9187]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y P + + V +L++G V + PTD+ YA+ C + SA+E++ RI+ +E
Sbjct: 4 YFVVHPVNPQTRLISQAVGILRQGGVIIYPTDSGYALGCMMGDKSALEKICRIRQLEDEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LC L ++ Y + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLLCNDLSELSVY--------AKIDNTAFRLIKNNTPGAYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+P + I QA+L ++ PL+S+++ DP +
Sbjct: 114 ------EKKKTIGIRVPTNNIAQALLTELGEPLMSSTLILPGQALAEADPEEFRGQL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG + A+P+TV+D + PK++R G G
Sbjct: 167 VVDLIIDGGTQGAQPTTVIDFSDDEPKVVRFGAG 200
>gi|91793800|ref|YP_563451.1| Sua5/YciO/YrdC/YwlC [Shewanella denitrificans OS217]
gi|91715802|gb|ABE55728.1| translation factor SUA5 [Shewanella denitrificans OS217]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 17/201 (8%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+ V +LK+G V V PTD+ YA+ C + A+ R+ RI+ +E S++CR L ++
Sbjct: 17 ISQAVAILKKGGVIVYPTDSGYALGCMIGEKDAMTRMVRIRKIENDHNFSLMCRDLSEL- 75
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
F + D Q +R +K PGPYTFI A+KEVPK+ + +K +G
Sbjct: 76 ---ANFAKVDNQA----YRLLKSSTPGPYTFIFKATKEVPKRL--------QCEKKKTIG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVA 194
+R+P++ I QA+L +DAP++STS+ + DP I D + +D +V GG
Sbjct: 121 IRVPDNLIAQALLTALDAPMMSTSLVMPDELFAESDPEHIRDILEHQ-VDAIVHGGYLPE 179
Query: 195 EPSTVVDMTGTYPKIIRQGKG 215
+ +TV+DM+ ++R G G
Sbjct: 180 KQTTVIDMSEDTIDVLRHGAG 200
>gi|340620085|ref|YP_004738538.1| hypothetical protein zobellia_4124 [Zobellia galactanivorans]
gi|339734882|emb|CAZ98259.1| YrdC family protein [Zobellia galactanivorans]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 119/205 (58%), Gaps = 22/205 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VV++L++G + + PTDT+Y + CD+ + A+E++ RIK ++ +K S +C L +
Sbjct: 16 EVKRVVDVLRKGGLIIYPTDTVYGLGCDITNSRALEKIARIKGIKLAKANWSFICADLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL + +PK + RK
Sbjct: 76 LSDYVR-------QIDTATFKILKRALPGPYTFILPGNNNLPK----------DFKKRKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYGPEGL-DFVVDGG 190
VG+R+P++ I +A+++ + P++STS++ D E+ DP +I + + E L D V+DGG
Sbjct: 119 VGIRVPDNTIARALVEGLGNPIVSTSIRDDDDLLEYTTDPELIFEKW--ENLVDIVIDGG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
STV+D++ +++R+GKG
Sbjct: 177 YGDNVASTVIDLSNGEAEVVREGKG 201
>gi|445454796|ref|ZP_21445511.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
WC-A-92]
gi|444752159|gb|ELW76849.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
WC-A-92]
Length = 205
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR G G
Sbjct: 165 KHIDVFIDGGFGTLTTTSIVDLSGEHPEIIRHGVG 199
>gi|348028865|ref|YP_004871551.1| Sua5/YciO/YrdC/YwlC family protein [Glaciecola nitratireducens
FR1064]
gi|347946208|gb|AEP29558.1| Sua5/YciO/YrdC/YwlC family protein [Glaciecola nitratireducens
FR1064]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 110/196 (56%), Gaps = 17/196 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E++K G V V PTD+ YAI C +++ A+E++ RI+++ +++CR + ++ Y
Sbjct: 22 EIIKAGEVIVYPTDSGYAIGCQMENKKALEQICRIRDIGKDHNFTLMCRDMSELSVYA-- 79
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
R D FR +K+ PGPYTF+L A+KEVPK+ + RK +G+R+PN
Sbjct: 80 --RVDNAA----FRQIKNNTPGPYTFVLKATKEVPKRL--------QNPKRKTIGIRVPN 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
+ I A+L+++ PL+ST++ + DP I D + + ++ GG EP+TV
Sbjct: 126 NPIALALLEELGEPLMSTTLILPNASMAETDPEEIRDKL-EKLVGLIIHGGYLGEEPTTV 184
Query: 200 VDMTGTYPKIIRQGKG 215
+DM+ +IR G G
Sbjct: 185 IDMSEGGTDVIRVGNG 200
>gi|398884725|ref|ZP_10639652.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM60]
gi|398193705|gb|EJM80801.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM60]
Length = 222
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRNGGVVIYPTDSSYAIGCQIGDKNAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRVLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDTDPMSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPTPFMAE 221
>gi|422616882|ref|ZP_16685587.1| Sua5/YciO/YrdC/YwlC [Pseudomonas syringae pv. japonica str.
M301072]
gi|330897267|gb|EGH28686.1| Sua5/YciO/YrdC/YwlC [Pseudomonas syringae pv. japonica str.
M301072]
Length = 209
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ E++K G + V PTD+ YA+ C + SAIER+RR++ ++
Sbjct: 4 FFQVHPENPQPRLIKQAAEIIKAGGLVVYPTDSSYALGCQIGDKSAIERIRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FRA+K PGPYTFIL A++EVP+ +
Sbjct: 64 NFTLMCCDLSQLGLFA--------KVDTGAFRALKAHTPGPYTFILNATREVPRLVL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I QA+L+++ PL+S S+ D+ + DP + +
Sbjct: 113 -----HPKRRTIGLRVPSHPIAQALLEQLGEPLMSVSLIMPGDSVPLSDPYEMRQILEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++DGG+ STV+++ P+I+R G G
Sbjct: 168 -VDLIIDGGIGGFSASTVINLAEGEPQIVRVGCG 200
>gi|393759378|ref|ZP_10348194.1| translation factor [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393162606|gb|EJC62664.1| translation factor [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 208
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 24 EGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRG 83
+G + +PTD+ YA+V L SA + LRR++ ++ L++LCR L +I + F +
Sbjct: 26 KGGLLAIPTDSSYAVVARLDDKSAADNLRRLRGLDDRHHLTLLCRDLAEI----SHFAKV 81
Query: 84 DGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAIC 143
D +R +K PGP+TFIL A+KEVP++ + RK +G+R+PN +
Sbjct: 82 DNPQ----YRLLKMATPGPWTFILEATKEVPRRV--------SHPSRKTIGIRVPNQKVA 129
Query: 144 QAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMT 203
A+++++ +PLIST++ ++E + D I D Y + L VVDGG + +TV+D+T
Sbjct: 130 LALMEQVGSPLISTTLIPEGEDEPLNDAQEILDRYAHQ-LAAVVDGGPCPLQATTVIDLT 188
Query: 204 GTYPKIIRQGKG 215
G P++ R+G G
Sbjct: 189 GPTPQVQRRGSG 200
>gi|301022797|ref|ZP_07186639.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 196-1]
gi|423705236|ref|ZP_17679659.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H730]
gi|432563484|ref|ZP_19800085.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE51]
gi|433047398|ref|ZP_20234798.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE120]
gi|442593753|ref|ZP_21011686.1| YciO family [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|299881098|gb|EFI89309.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli MS 196-1]
gi|385704606|gb|EIG41679.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli H730]
gi|431095973|gb|ELE01568.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE51]
gi|431569436|gb|ELI42379.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE120]
gi|441606434|emb|CCP96966.1| YciO family [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQTLLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|169796996|ref|YP_001714789.1| hypothetical protein ABAYE2997 [Acinetobacter baumannii AYE]
gi|184157091|ref|YP_001845430.1| putative translation factor (SUA5) [Acinetobacter baumannii ACICU]
gi|213156599|ref|YP_002318260.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii AB0057]
gi|215484458|ref|YP_002326691.1| yrdC domain protein [Acinetobacter baumannii AB307-0294]
gi|260555712|ref|ZP_05827932.1| yrdC domain-containing protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|301348043|ref|ZP_07228784.1| yrdC domain protein [Acinetobacter baumannii AB056]
gi|301510847|ref|ZP_07236084.1| yrdC domain protein [Acinetobacter baumannii AB058]
gi|301594335|ref|ZP_07239343.1| yrdC domain protein [Acinetobacter baumannii AB059]
gi|332852084|ref|ZP_08433911.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6013150]
gi|332867482|ref|ZP_08437635.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6013113]
gi|332872667|ref|ZP_08440635.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6014059]
gi|384130770|ref|YP_005513382.1| putative translation factor [Acinetobacter baumannii 1656-2]
gi|384142059|ref|YP_005524769.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385236359|ref|YP_005797698.1| putative translation factor [Acinetobacter baumannii TCDC-AB0715]
gi|387124995|ref|YP_006290877.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii MDR-TJ]
gi|403675529|ref|ZP_10937691.1| putative translation factor [Acinetobacter sp. NCTC 10304]
gi|407931697|ref|YP_006847340.1| translation factor [Acinetobacter baumannii TYTH-1]
gi|416145422|ref|ZP_11600461.1| putative translation factor (SUA5) [Acinetobacter baumannii AB210]
gi|417544471|ref|ZP_12195557.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC032]
gi|417555616|ref|ZP_12206685.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-81]
gi|417562113|ref|ZP_12212992.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC137]
gi|417570092|ref|ZP_12220949.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC189]
gi|417574701|ref|ZP_12225555.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Acinetobacter baumannii
Canada BC-5]
gi|417577100|ref|ZP_12227945.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-17]
gi|417870602|ref|ZP_12515557.1| yrdC domain protein [Acinetobacter baumannii ABNIH1]
gi|417872490|ref|ZP_12517392.1| yrdC domain protein [Acinetobacter baumannii ABNIH2]
gi|417876890|ref|ZP_12521638.1| yrdC domain protein [Acinetobacter baumannii ABNIH3]
gi|421200839|ref|ZP_15657998.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC109]
gi|421204712|ref|ZP_15661830.1| sua5 family protein [Acinetobacter baumannii AC12]
gi|421456493|ref|ZP_15905835.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-123]
gi|421534741|ref|ZP_15981012.1| yrdC domain protein [Acinetobacter baumannii AC30]
gi|421622738|ref|ZP_16063635.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC074]
gi|421625156|ref|ZP_16066012.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC098]
gi|421628110|ref|ZP_16068896.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC180]
gi|421632687|ref|ZP_16073334.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-13]
gi|421642508|ref|ZP_16083024.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-235]
gi|421649014|ref|ZP_16089410.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-251]
gi|421658995|ref|ZP_16099221.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-83]
gi|421663708|ref|ZP_16103852.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC110]
gi|421665902|ref|ZP_16106001.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC087]
gi|421670502|ref|ZP_16110500.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC099]
gi|421675218|ref|ZP_16115143.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC065]
gi|421686774|ref|ZP_16126518.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-143]
gi|421692900|ref|ZP_16132550.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-116]
gi|421696428|ref|ZP_16136014.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-692]
gi|421699214|ref|ZP_16138749.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-58]
gi|421701916|ref|ZP_16141402.1| putative translation factor [Acinetobacter baumannii ZWS1122]
gi|421706246|ref|ZP_16145663.1| putative translation factor [Acinetobacter baumannii ZWS1219]
gi|421796881|ref|ZP_16232935.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-21]
gi|421798910|ref|ZP_16234918.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii Canada
BC1]
gi|421803421|ref|ZP_16239339.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
WC-A-694]
gi|421809660|ref|ZP_16245493.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC035]
gi|424053475|ref|ZP_17791007.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab11111]
gi|424060934|ref|ZP_17798425.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab33333]
gi|424062868|ref|ZP_17800353.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab44444]
gi|425752695|ref|ZP_18870602.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-113]
gi|445402043|ref|ZP_21430516.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-57]
gi|445472689|ref|ZP_21452649.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC338]
gi|445480569|ref|ZP_21455644.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-78]
gi|445487609|ref|ZP_21457880.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii AA-014]
gi|169149923|emb|CAM87817.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183208685|gb|ACC56083.1| putative translation factor (SUA5) [Acinetobacter baumannii ACICU]
gi|193076588|gb|ABO11251.2| hypothetical protein A1S_0813 [Acinetobacter baumannii ATCC 17978]
gi|213055759|gb|ACJ40661.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii AB0057]
gi|213987507|gb|ACJ57806.1| yrdC domain protein [Acinetobacter baumannii AB307-0294]
gi|260410623|gb|EEX03921.1| yrdC domain-containing protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|322506990|gb|ADX02444.1| putative translation factor (SUA5) [Acinetobacter baumannii 1656-2]
gi|323516857|gb|ADX91238.1| putative translation factor (SUA5) [Acinetobacter baumannii
TCDC-AB0715]
gi|332729456|gb|EGJ60795.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6013150]
gi|332733899|gb|EGJ65044.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6013113]
gi|332739196|gb|EGJ70055.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
6014059]
gi|333366968|gb|EGK48982.1| putative translation factor (SUA5) [Acinetobacter baumannii AB210]
gi|342227344|gb|EGT92278.1| yrdC domain protein [Acinetobacter baumannii ABNIH1]
gi|342233660|gb|EGT98376.1| yrdC domain protein [Acinetobacter baumannii ABNIH2]
gi|342236880|gb|EGU01379.1| yrdC domain protein [Acinetobacter baumannii ABNIH3]
gi|347592552|gb|AEP05273.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385879487|gb|AFI96582.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii MDR-TJ]
gi|395524695|gb|EJG12784.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC137]
gi|395550540|gb|EJG16549.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC189]
gi|395562871|gb|EJG24524.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC109]
gi|395570321|gb|EJG30983.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-17]
gi|398325865|gb|EJN42025.1| sua5 family protein [Acinetobacter baumannii AC12]
gi|400210269|gb|EJO41239.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Acinetobacter baumannii
Canada BC-5]
gi|400210921|gb|EJO41885.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-123]
gi|400382359|gb|EJP41037.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC032]
gi|400392033|gb|EJP59080.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-81]
gi|404559545|gb|EKA64802.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-116]
gi|404561608|gb|EKA66834.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-692]
gi|404567237|gb|EKA72363.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-143]
gi|404571841|gb|EKA76890.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-58]
gi|404667613|gb|EKB35526.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab11111]
gi|404668886|gb|EKB36795.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab33333]
gi|404675238|gb|EKB42954.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Ab44444]
gi|407194403|gb|EKE65544.1| putative translation factor [Acinetobacter baumannii ZWS1219]
gi|407195068|gb|EKE66203.1| putative translation factor [Acinetobacter baumannii ZWS1122]
gi|407900278|gb|AFU37109.1| putative translation factor [Acinetobacter baumannii TYTH-1]
gi|408513235|gb|EKK14869.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-235]
gi|408514263|gb|EKK15870.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii IS-251]
gi|408694294|gb|EKL39867.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC074]
gi|408699581|gb|EKL45057.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC098]
gi|408708395|gb|EKL53669.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-13]
gi|408708631|gb|EKL53904.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC180]
gi|408708934|gb|EKL54196.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-83]
gi|408713047|gb|EKL58222.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC110]
gi|409987407|gb|EKO43589.1| yrdC domain protein [Acinetobacter baumannii AC30]
gi|410382765|gb|EKP35304.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC065]
gi|410385181|gb|EKP37676.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC099]
gi|410388936|gb|EKP41359.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC087]
gi|410398114|gb|EKP50340.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-21]
gi|410411121|gb|EKP63001.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii Canada
BC1]
gi|410413012|gb|EKP64856.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
WC-A-694]
gi|410414020|gb|EKP65827.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC035]
gi|425498926|gb|EKU64992.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-113]
gi|444768499|gb|ELW92714.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii AA-014]
gi|444769894|gb|ELW94059.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC338]
gi|444771585|gb|ELW95714.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-78]
gi|444782850|gb|ELX06725.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-57]
gi|452948420|gb|EME53899.1| translation factor [Acinetobacter baumannii MSP4-16]
Length = 205
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRRGVG 199
>gi|418287661|ref|ZP_12900233.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis NM233]
gi|418289915|ref|ZP_12902134.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis NM220]
gi|372202565|gb|EHP16359.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis NM220]
gi|372203515|gb|EHP17169.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis NM233]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|187479076|ref|YP_787101.1| hypothetical protein BAV2596 [Bordetella avium 197N]
gi|115423663|emb|CAJ50208.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 208
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P L+ + + +G + VPTD+ YA+ L A +RLRR++ ++
Sbjct: 3 LHLSIHPDNPQPRLLKQAAQWIGDGGLIAVPTDSSYAVAARLDDKDAADRLRRLRGLDER 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L +I + R +R +K PGP+TFIL A++EVP++
Sbjct: 63 HHLTLLCRDLAEIGQFAKVDNRQ--------YRLLKLATPGPWTFILEATREVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ A+ A+L+++ APL+ST++ +++ + D I+ +
Sbjct: 112 -----SHPSRKTIGIRVPDHAVALALLEQVGAPLLSTTLIPKGEDDALNDAEAISLRFAH 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ L V+D G P+TV+D+TG P ++R+G+G
Sbjct: 167 D-LAAVIDAGACPQHPTTVIDLTGDEPVVLRRGRG 200
>gi|261856053|ref|YP_003263336.1| Sua5/YciO/YrdC/YwlC family protein [Halothiobacillus neapolitanus
c2]
gi|261836522|gb|ACX96289.1| Sua5/YciO/YrdC/YwlC family protein [Halothiobacillus neapolitanus
c2]
Length = 208
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 116/213 (54%), Gaps = 17/213 (7%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + + E L +G+V V+PTD+ Y + C L+ +A+ ++ +I+
Sbjct: 5 LEVHPESPQPRLVTQIAEALSDGSVIVLPTDSGYTLACRLEDKTALAKIAQIRRDNEPHH 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
+++LCR L +I TY + D Q +R +K PGPYTFIL A+ EVP++ +
Sbjct: 65 MTLLCRDLSEISTYA----KLDNQH----YRFLKTHTPGPYTFILEATSEVPRRLL---- 112
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
++ ++ +G+R+P + + +++L+++ AP++S S+ NE + DP +
Sbjct: 113 ----HAKKRSIGLRVPQNTVLRSVLEELAAPILSASLVLPDHNEPLEDPEWFPRAVERQ- 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +V G PSTV+DMTG ++R+G G
Sbjct: 168 VDMIVSTGFHAQNPSTVIDMTGDEFVLVREGLG 200
>gi|419945913|ref|ZP_14462339.1| hypothetical protein ECHM605_17709 [Escherichia coli HM605]
gi|432597357|ref|ZP_19833634.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE62]
gi|388414156|gb|EIL74123.1| hypothetical protein ECHM605_17709 [Escherichia coli HM605]
gi|431131481|gb|ELE33501.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia coli KTE62]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I Q +L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPSNPIAQVLLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|305667010|ref|YP_003863297.1| putative Sua5/yciO/yrdC family protein [Maribacter sp. HTCC2170]
gi|88709245|gb|EAR01479.1| putative Sua5/yciO/yrdC family protein [Maribacter sp. HTCC2170]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 117/200 (58%), Gaps = 20/200 (10%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
VV+ L++G + + PTDT+Y++ CD+ + A+E+L RIK ++ K S +C L ++ Y
Sbjct: 20 VVQSLRKGGLIIYPTDTVYSLGCDITNTRALEKLARIKGIKLEKANWSFVCADLSNLSDY 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
Q ++F+ +K LPGPYTFIL S +PK + +K +G+R
Sbjct: 80 VR-------QIDTSVFKILKRALPGPYTFILPGSNSLPK----------VFKKKKTIGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGVRVAE 195
+PN++I + ++Q++ P++STS+ + E+ DP +I + +G +D V+DGG
Sbjct: 123 VPNNSIPKTLVQELGNPIVSTSIHDEDEVLEYTTDPELIHEKWG-NIVDVVIDGGYGGNI 181
Query: 196 PSTVVDMTGTYPKIIRQGKG 215
STV+D++ +++R+GKG
Sbjct: 182 ASTVIDLSQDEVEVVREGKG 201
>gi|336250753|ref|YP_004594463.1| hypothetical protein EAE_21405 [Enterobacter aerogenes KCTC 2190]
gi|444351051|ref|YP_007387195.1| YciO family [Enterobacter aerogenes EA1509E]
gi|334736809|gb|AEG99184.1| hypothetical protein EAE_21405 [Enterobacter aerogenes KCTC 2190]
gi|443901881|emb|CCG29655.1| YciO family [Enterobacter aerogenes EA1509E]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 21/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLD 184
RK +G+R+P + I Q +L+ + P++STS+ L NE+ DP I D + +D
Sbjct: 114 --EKRKTIGMRVPANPIAQMLLETLGEPMLSTSL-MLPGNEFTESDPEEIKDRL-EKVVD 169
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 170 LIIHGGYLGQQPTTVIDLTEDAPVVLREGVG 200
>gi|385678114|ref|ZP_10052042.1| hypothetical protein AATC3_19445 [Amycolatopsis sp. ATCC 39116]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + +V+LL++ + V PTD+ YA+ C L + ++R+R I++++
Sbjct: 4 YFDVHPDNPQRRSIGQIVDLLRQDGLIVYPTDSAYALGCQLGNRDGLDRIRAIRHLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + + +FRA+K PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCRDFAQLGQF--------AHVDNTVFRAIKAATPGSYTFILPATKEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRIP+ + QA+L ++ PL+S+++ E + I D
Sbjct: 113 -----HPKKKTVGVRIPDHVVAQALLDELGEPLVSSTLLLPDHEEPLTQGWEIKDELD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVD G EP+TV+D + P+I+R+G G
Sbjct: 167 MVDGVVDSGDCGTEPTTVIDFSSGEPEIVRKGAG 200
>gi|312883596|ref|ZP_07743321.1| YrdC family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368819|gb|EFP96346.1| YrdC family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S RK +G+R+P++ I +L+ + PL+STS+ + DP I D
Sbjct: 114 ------SKRKTIGIRVPDNRIALDLLEALGEPLMSTSLILPGQDVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I+R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSEDEPVIVRMGSG 200
>gi|162418116|ref|YP_001606745.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis Angola]
gi|420547105|ref|ZP_15045026.1| hypothetical protein YPPY01_2513 [Yersinia pestis PY-01]
gi|420637894|ref|ZP_15126468.1| hypothetical protein YPPY25_2594 [Yersinia pestis PY-25]
gi|420735490|ref|ZP_15213118.1| hypothetical protein YPPY61_2611 [Yersinia pestis PY-61]
gi|420800295|ref|ZP_15270151.1| hypothetical protein YPPY92_2593 [Yersinia pestis PY-92]
gi|420859194|ref|ZP_15322853.1| hypothetical protein YPPY113_2699 [Yersinia pestis PY-113]
gi|162350931|gb|ABX84879.1| Sua5/YciO/YrdC/YwlC family protein [Yersinia pestis Angola]
gi|391425772|gb|EIQ88008.1| hypothetical protein YPPY01_2513 [Yersinia pestis PY-01]
gi|391511263|gb|EIR64696.1| hypothetical protein YPPY25_2594 [Yersinia pestis PY-25]
gi|391614283|gb|EIS56164.1| hypothetical protein YPPY61_2611 [Yersinia pestis PY-61]
gi|391681520|gb|EIT15471.1| hypothetical protein YPPY92_2593 [Yersinia pestis PY-92]
gi|391734593|gb|EIT62844.1| hypothetical protein YPPY113_2699 [Yersinia pestis PY-113]
Length = 176
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 109/187 (58%), Gaps = 17/187 (9%)
Query: 29 VVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGH 88
+ PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 1 MYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY--------AYVD 52
Query: 89 ANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQ 148
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P++ I A+L
Sbjct: 53 NSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVPSNPIALALLD 104
Query: 149 KMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPK 208
+ PL+ST++ ++ DP I + G + +D ++ GG +P+TV+D+T + P+
Sbjct: 105 ALGEPLMSTTLMLPGNDFAESDPEEIKENLGKQ-VDLIIHGGSLGQQPTTVIDLTDSAPE 163
Query: 209 IIRQGKG 215
+IR+G G
Sbjct: 164 VIREGAG 170
>gi|421543871|ref|ZP_15989958.1| hypothetical protein NMEN140_0424 [Neisseria meningitidis NM140]
gi|421545900|ref|ZP_15991957.1| hypothetical protein NMEN183_0399 [Neisseria meningitidis NM183]
gi|421547958|ref|ZP_15993989.1| hypothetical protein NMEN2781_0401 [Neisseria meningitidis NM2781]
gi|421552224|ref|ZP_15998203.1| hypothetical protein NMEN576_0535 [Neisseria meningitidis NM576]
gi|402325054|gb|EJU60468.1| hypothetical protein NMEN183_0399 [Neisseria meningitidis NM183]
gi|402325130|gb|EJU60542.1| hypothetical protein NMEN140_0424 [Neisseria meningitidis NM140]
gi|402327300|gb|EJU62691.1| hypothetical protein NMEN2781_0401 [Neisseria meningitidis NM2781]
gi|402332377|gb|EJU67704.1| hypothetical protein NMEN576_0535 [Neisseria meningitidis NM576]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRECL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|330998752|ref|ZP_08322480.1| Sua5/YciO/YrdC/YwlC family protein [Parasutterella
excrementihominis YIT 11859]
gi|329576249|gb|EGG57765.1| Sua5/YciO/YrdC/YwlC family protein [Parasutterella
excrementihominis YIT 11859]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++E +LL +G + V TDT +++VC L A++++R I+ + K ++
Sbjct: 9 PESPQPHRIEQAAKLLTKGQLAAVSTDTGFSLVCRLDDKEALDKIRLIRQLSEKKHFTLF 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL + + R + G +R K PGPYTFIL A+KEVP++
Sbjct: 69 CDSLSQM----SKLARVNNTG----YRMAKSVTPGPYTFILEATKEVPRRL--------S 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ +K +G+R+P++ A+L+K+ PL+ T+V + E + I D G + L F+
Sbjct: 113 HPSKKTIGLRVPSNKALHALLEKIGEPLVGTTVIMPGEEEPLSSAWEIQDRIGDQ-LAFI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D G V +TVVD++G P++IR+G G
Sbjct: 172 LDDGTSVIGDTTVVDLSGDEPEVIREGLG 200
>gi|297538007|ref|YP_003673776.1| Sua5/YciO/YrdC/YwlC family protein [Methylotenera versatilis 301]
gi|297257354|gb|ADI29199.1| Sua5/YciO/YrdC/YwlC family protein [Methylotenera versatilis 301]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 17/196 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E+L++G V PTD+ YA+ C L A R+R+I+ V+ ++LCR+L ++ Y
Sbjct: 22 EILRDGGVIAYPTDSGYALGCMLGHGDAQTRIRQIRGVDDKHLFTLLCRNLSELGNYAV- 80
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
+ Q FR +K PG YTFIL A++EVP+K ++ R VG+R+P+
Sbjct: 81 --VSNSQ-----FRLLKANTPGAYTFILNATREVPRKL--------QHPKRNTVGLRVPD 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
A+ QAIL+++DAPL+S ++ ++ + + I D +D V+D G VA ++V
Sbjct: 126 HAVVQAILEEIDAPLLSMTLYIPDEDSVLSEAWEIRDKL-EHVVDLVIDVGHCVAGATSV 184
Query: 200 VDMTGTYPKIIRQGKG 215
+++TG P++IR+G G
Sbjct: 185 INLTGDAPELIREGLG 200
>gi|320093762|ref|ZP_08025611.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces sp. oral taxon 178
str. F0338]
gi|319979308|gb|EFW10802.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces sp. oral taxon 178
str. F0338]
Length = 205
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
YVE P ++ VV LL+EG V +PTD+ YAI C L + + ++ +R ++ ++
Sbjct: 3 YVEMHPVNPQKRFVDKVVGLLREGGVVALPTDSGYAIACRLGNKAGMDTIRDVRRLDDKH 62
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
S+LC S + H FR +K PGPYTFIL +KEVP+ +
Sbjct: 63 NFSLLCSSFAQLGELVI------LDNHE--FRTIKALTPGPYTFILRGTKEVPRMTLNK- 113
Query: 122 TTTAKYSLRKH-VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+KH VGVR+P+ AI QA++ + PL+ +++ + E + D + ++ G
Sbjct: 114 --------KKHTVGVRLPDHAITQAVVSALGEPLLCSTLILPGETEPLTDGREVDESIGS 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VV G V AEP+TVVD T +++R+G G
Sbjct: 166 R-VDLVVVGPVGDAEPTTVVDFTSGTAEVVRRGAG 199
>gi|260768729|ref|ZP_05877663.1| YrdC family protein [Vibrio furnissii CIP 102972]
gi|375131258|ref|YP_004993358.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio furnissii NCTC 11218]
gi|260616759|gb|EEX41944.1| YrdC family protein [Vibrio furnissii CIP 102972]
gi|315180432|gb|ADT87346.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio furnissii NCTC 11218]
Length = 206
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLITQAVAIIRNGGVVVYPTDSGYALGCQLENKHALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLMCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+PN+ I +L+ M PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPNNQIALDLLEAMGEPLMSTSLILPGNETTESDPEEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + +++R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVVDFSDDEMQVVRFGAG 200
>gi|408825764|ref|ZP_11210654.1| hypothetical protein SsomD4_01177 [Streptomyces somaliensis DSM
40738]
Length = 206
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + V E+++ GA+ PTD+ YA+ C L + + R+R I++++
Sbjct: 4 YFDVHPDDPQRRVVGTVAEMIRSGALVAYPTDSCYALGCKLGNREGLARIRGIRDLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + Y ++FRA+K PG YTFIL A+KEVP++
Sbjct: 64 HFTLVCRDFAQLGQYV--------HIGNDVFRALKSATPGRYTFILPATKEVPRQ----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K VGVRIP+ QA+L ++ PL+S+++ + E M I D
Sbjct: 111 ---MQHPKKKTVGVRIPDHTATQALLAELGEPLVSSTLLLPGEEEPMTQGWEIKDRLD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VVD G P+TVVD +G P+I+R+G G
Sbjct: 167 VLDAVVDSGDCGTAPTTVVDFSGGAPEIVRRGAG 200
>gi|119505057|ref|ZP_01627133.1| putative translation factor (SUA5) [marine gamma proteobacterium
HTCC2080]
gi|119459039|gb|EAW40138.1| putative translation factor (SUA5) [marine gamma proteobacterium
HTCC2080]
Length = 208
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
VE+L+ G V PTD+ YA+ C L A+E +RRI+ ++ + +++C L + Y
Sbjct: 21 VEILRSGGVIAYPTDSAYALGCRLGDKRALECIRRIRKLDDNHNFTLVCPDLSVLGAY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
+ + +R +K+ PGPYTFIL A+ EVP++ + + RK VGVR+P
Sbjct: 79 ------AKVDNSAYRLIKNATPGPYTFILEATGEVPRRLL--------HPRRKTVGVRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++AI QA+L + P++S +++ D+ + DP I T + V+DGG EP+T
Sbjct: 125 DNAITQALLAEFAEPIMSVTLQLPGDDYPLTDPYDIRTTL-EHDVALVIDGGFCGLEPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D++ +++R+G G
Sbjct: 184 VIDLSADSYEVLREGLG 200
>gi|375266063|ref|YP_005023506.1| hypothetical protein VEJY3_10240 [Vibrio sp. EJY3]
gi|369841384|gb|AEX22528.1| hypothetical protein VEJY3_10240 [Vibrio sp. EJY3]
Length = 206
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEISLYA----RVDNGA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNQIALDLLEALGEPLMSTSLILPNSDVAESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +PSTV+D + P ++R G G
Sbjct: 167 AVDVILNGGYLGEQPSTVIDFSEGDPVVVRLGSG 200
>gi|433521221|ref|ZP_20477921.1| telomere recombination family protein [Neisseria meningitidis
61103]
gi|432262259|gb|ELL17503.1| telomere recombination family protein [Neisseria meningitidis
61103]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKEVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRECL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|283832908|ref|ZP_06352649.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter youngae ATCC 29220]
gi|395229588|ref|ZP_10407899.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter sp. A1]
gi|421847396|ref|ZP_16280534.1| hypothetical protein D186_20192 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424729694|ref|ZP_18158294.1| php domain protein [Citrobacter sp. L17]
gi|291071513|gb|EFE09622.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter youngae ATCC 29220]
gi|394716803|gb|EJF22533.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter sp. A1]
gi|411771192|gb|EKS54899.1| hypothetical protein D186_20192 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422895649|gb|EKU35436.1| php domain protein [Citrobacter sp. L17]
gi|455645717|gb|EMF24760.1| hypothetical protein H262_03010 [Citrobacter freundii GTC 09479]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|417548068|ref|ZP_12199149.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-18]
gi|417565416|ref|ZP_12216290.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC143]
gi|395557172|gb|EJG23173.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC143]
gi|400388367|gb|EJP51439.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-18]
Length = 205
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL+A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILSATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRCGVG 199
>gi|417881691|ref|ZP_12526004.1| yrdC domain protein [Acinetobacter baumannii ABNIH4]
gi|421793097|ref|ZP_16229235.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-2]
gi|342238750|gb|EGU03178.1| yrdC domain protein [Acinetobacter baumannii ABNIH4]
gi|410398357|gb|EKP50579.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
Naval-2]
Length = 205
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P +E VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLA- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG ++++D++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIIDLSGEHPEIIRRGVG 199
>gi|326796235|ref|YP_004314055.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas mediterranea MMB-1]
gi|326546999|gb|ADZ92219.1| Sua5/YciO/YrdC/YwlC family protein [Marinomonas mediterranea MMB-1]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ ++++EG V PTD+ Y++ C + A+ER+R I+ ++
Sbjct: 4 FFQVHPDNPQVRLIKQAAQIVREGGVIAYPTDSGYSLGCHIGDKKALERIRTIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++ R L +I TY R D ++R +KH PGPYTFI A+ EVP++ +
Sbjct: 64 NFTLVVRDLSEISTYA----RFDNV----MYRLLKHNTPGPYTFIFNATSEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP I A+L ++ PL+S S+ +++ M+DP I T +
Sbjct: 113 -----HPKRKTIGIRIPQSNIVSALLDELGEPLMSASLILPGESDPMMDPYDIRGTLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG EP+TVV M + R G G
Sbjct: 168 -LDLVIDGGYCGMEPTTVVHMDSEDITVSRVGAG 200
>gi|325578257|ref|ZP_08148392.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae ATCC
33392]
gi|419802974|ref|ZP_14328152.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae
HK262]
gi|419844802|ref|ZP_14368089.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae
HK2019]
gi|325159993|gb|EGC72122.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae ATCC
33392]
gi|385188770|gb|EIF36243.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae
HK262]
gi|386416728|gb|EIJ31220.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parainfluenzae
HK2019]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 22/212 (10%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L++G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
C L ++ TY T +N+ +R +K+ PG YTFILTA+KE+P++ + T+
Sbjct: 69 CSDLSELSTYATV---------SNVAYRLIKNNTPGRYTFILTATKELPRRLM-----TS 114
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGL 183
K RK +G+R+P++ I +L+ + P++S S+ L DNE M DP I + + +
Sbjct: 115 K---RKTIGLRVPDNQIALDLLKALGEPILSCSL-MLPDNEHMTYSDPEEIRECLERQ-V 169
Query: 184 DFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
D ++ GG EP+TVVD+T P I+R+G G
Sbjct: 170 DLIIHGGYLGQEPTTVVDLTEESPVILREGSG 201
>gi|167765241|ref|ZP_02437354.1| hypothetical protein BACSTE_03629 [Bacteroides stercoris ATCC
43183]
gi|167696869|gb|EDS13448.1| Sua5/YciO/YrdC/YwlC family protein [Bacteroides stercoris ATCC
43183]
Length = 204
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 26/212 (12%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDI 73
L+ V+++L +G + + PTDT+YAI C AIER+ ++KN +P K LSI+C L I
Sbjct: 15 LQQVIDILNDGGIIIYPTDTMYAIGCHGLKERAIERICQLKNTDPKKNNLSIICYDLSSI 74
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
Y + N F+ +K LPG +TFIL + +PK + RK V
Sbjct: 75 SEY--------AKFDNNTFKLMKRNLPGAFTFILNGTVRLPK----------IFRNRKEV 116
Query: 134 GVRIPNDAICQAILQKMDAPLISTSV--KWLKDNEWMVDPVVIADTYGPEGLDFVVDGGV 191
G+R+P+ I + + + +DAP+++ ++ +D E+ DP +I + +G +D V+DGG+
Sbjct: 117 GIRMPDHPIIRELARLLDAPIMTATLPHNENEDIEYCTDPELIDEKFG-NIVDLVIDGGI 175
Query: 192 RVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
E STVVD TG +I+RQGKG W++E
Sbjct: 176 GGIEGSTVVDCTGGEAEIVRQGKG----WLDE 203
>gi|159038218|ref|YP_001537471.1| Sua5/YciO/YrdC/YwlC family protein [Salinispora arenicola CNS-205]
gi|157917053|gb|ABV98480.1| Sua5/YciO/YrdC/YwlC family protein [Salinispora arenicola CNS-205]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P L VV L++ G + PTD+ +A+ C L ++R+R I+ +
Sbjct: 4 YFDVHPDNPQPRILRQVVGLVQAGGLIAYPTDSCFALGCQLGDRHGLDRIRDIRRLNERH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + + Q +FR VK C+PG YTF+L A++EVP++ +
Sbjct: 64 HFTLVCRDFAQLGQFV--------QVSNAMFRLVKSCIPGSYTFVLPATREVPRRML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ VGVR+P+ A+ QA+L ++ PL+S+++ ++E + I +
Sbjct: 113 -----HPRKRTVGVRVPDHAVTQALLAELGEPLVSSTLVLPDEDEPLTQGWEIKERLD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VVD G +P+TVVD++G P+++R+G G
Sbjct: 167 VLDGVVDAGDCGKDPTTVVDLSGDEPEVLRRGAG 200
>gi|295095682|emb|CBK84772.1| Sua5/YciO/YrdC/YwlC family protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ ++ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGSMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAY---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I QA+L+ + P++STS+ DP I D + ++
Sbjct: 114 --EKRKTIGMRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVEL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TVVD+T P++IR+G G
Sbjct: 171 IIHGGYLGQQPTTVVDLTEDAPEVIREGVG 200
>gi|307546301|ref|YP_003898780.1| translation factor [Halomonas elongata DSM 2581]
gi|307218325|emb|CBV43595.1| K07566 putative translation factor [Halomonas elongata DSM 2581]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ V ++++G V PTD+ YA+ C L AIER++ +++++
Sbjct: 4 FFQIHPENPQKRLIDQAVRIIRDGGVIAYPTDSGYALGCHLGDKKAIERIKWLRSLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L +I TY + +FR +K PG YTFIL A+ EVP+ +
Sbjct: 64 NFTLVCSDLSEIGTY--------AKVDNAVFRLLKAHTPGAYTFILQATSEVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +GVR+P+ I +A+L ++ PL+S ++ + + + M + I + +G
Sbjct: 113 -----HPKRRSIGVRVPDHPIPRALLAELGEPLMSVTLIPVGEEQPMTEAEEIRERFGAH 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+DGG EP++V+D+ P+I+R+G+G
Sbjct: 168 -LDLVIDGGACHLEPTSVIDLRELPPQIVREGRG 200
>gi|260776102|ref|ZP_05884997.1| YrdC family protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607325|gb|EEX33590.1| YrdC family protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V + PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVIYPTDSGYALGCQLENKQALERICKIRRLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S RK +G+R+P++ I +L+ + PL+STS+ ++ DP I D
Sbjct: 114 ------SKRKTIGIRVPDNQIALDLLEALGEPLMSTSLILPGNDVTESDPEEIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSDDEPVIARVGSG 200
>gi|89094112|ref|ZP_01167055.1| hypothetical protein MED92_16255 [Neptuniibacter caesariensis]
gi|89081587|gb|EAR60816.1| hypothetical protein MED92_16255 [Oceanospirillum sp. MED92]
Length = 205
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + VE++ G V + PTD YA+ C L SA+E+++RI+ ++
Sbjct: 4 FFQIHPENPQQRLINQAVEIINRGGVVIYPTDCAYALGCHLGDKSALEKIKRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + + +R +K PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLVCRDLSEISTY--------AKVDNSCYRLLKSHTPGAYTFILKATSEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+RIP++ I A+ + + P++STS+ + ++DP + + +
Sbjct: 113 -----HPKRRTIGIRIPDNPIALALTEALGEPIMSTSLIMPGEEMPLMDPYEMRELLQHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG E ++V+++ P+IIR+G G
Sbjct: 168 -VDLVIDGGYCGMEATSVINLVEETPEIIREGAG 200
>gi|345430097|ref|YP_004823217.1| hypothetical protein PARA_15310 [Haemophilus parainfluenzae T3T1]
gi|301156160|emb|CBW15631.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 207
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 118/211 (55%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L++G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY T + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYAT--------VSNSAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGLD 184
RK +G+R+P++ I +L+ + P++S S+ L DNE M DP I + + +D
Sbjct: 116 ---RKTIGLRVPDNQIALDLLKALGEPILSCSL-MLPDNEHMTYSDPEEIRECLERQ-VD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+T P I+R+G G
Sbjct: 171 LIIHGGYLGQEPTTVVDLTEESPVILREGSG 201
>gi|410622476|ref|ZP_11333310.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410157994|dbj|GAC28684.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + ++ E+++ G V V PTD+ YAI C +++ A+E++ RI+++
Sbjct: 4 FFYVHPDNPQARLIKQACEIIRAGEVIVYPTDSGYAIGCQMENKKALEQICRIRDIGKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + ++ Y R D FR +K+ PGPYTFIL A+KEVPK+
Sbjct: 64 NFTLMCRDMSELSVYA----RVDNAA----FRQIKNNTPGPYTFILKATKEVPKRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P+ I A+L++ P++ST++ + DP I D +
Sbjct: 112 ----QNPKRRTIGIRVPDHPIALALLEEFGEPIMSTTLILRNASMAETDPEEIRDKL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ ++ GG EP+TV+DM+ KIIR G G
Sbjct: 167 LVGLIIHGGYLGEEPTTVIDMSDGETKIIRVGNG 200
>gi|399001593|ref|ZP_10704305.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM18]
gi|398127144|gb|EJM16558.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM18]
Length = 209
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRNGGVVIYPTDSSYAIGCQIGDKTAVERVRRLRQLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + + DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDTDPLTDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPTPFMAE 208
>gi|254506994|ref|ZP_05119132.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus 16]
gi|219549989|gb|EED26976.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio parahaemolyticus 16]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNSA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S RK +G+R+P++ I +L+ + PL+STS+ ++ DP I D
Sbjct: 114 ------SKRKTIGIRVPDNQIALDLLEALGEPLMSTSLILPGNDYTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSDDDPVIARLGSG 200
>gi|86141363|ref|ZP_01059909.1| putative Sua5/yciO/yrdC family protein [Leeuwenhoekiella blandensis
MED217]
gi|85831922|gb|EAQ50377.1| putative Sua5/yciO/yrdC family protein [Leeuwenhoekiella blandensis
MED217]
Length = 205
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 118/205 (57%), Gaps = 22/205 (10%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ +VE+LK V + PTDT+Y + CD+ S+ A+ER+ +++ V+ +K S +C L +
Sbjct: 16 EIKRIVEVLKNDGVIIYPTDTVYGLGCDITSNRALERVAQLRGVKLAKANFSFICEDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q F+ +K LPGPYTFIL + +P + +K
Sbjct: 76 LSDYVR-------QIDTPTFKLLKRALPGPYTFILPGNNNLP----------TVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYGPEGLDFVVDGG 190
VG+R+P++ I +AI+ + P+ISTS+ + +D+ E+ DP +I + + + +D V+DGG
Sbjct: 119 VGIRVPDNNIARAIVSHLGNPIISTSI-YDEDDVIEYTTDPELILEKWD-KLVDVVIDGG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
PSTV+D+T ++R+GKG
Sbjct: 177 YGGNIPSTVIDLTSGEAVVLREGKG 201
>gi|145594996|ref|YP_001159293.1| Sua5/YciO/YrdC/YwlC family protein [Salinispora tropica CNB-440]
gi|145304333|gb|ABP54915.1| translation factor SUA5 [Salinispora tropica CNB-440]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P L VV L+++G + PTD+ A+ C L ++R+R I+ ++
Sbjct: 4 YYDVHPDNPQPRILRQVVGLVRDGGLIAYPTDSCCALGCQLGDRRGLDRIRDIRRLDERH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + + Q +FR VK C+PG YTFIL A++EVP++ +
Sbjct: 64 HFTLVCRDFAQLGQFV--------QISNAVFRLVKSCIPGSYTFILPATREVPRRML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ VGVR+P+ A+ QA+L ++ P++S+++ + E + I +
Sbjct: 113 -----HPRKRTVGVRVPDHAVAQALLAELGEPMVSSTLILPGEEEPLTQGWEIKERLD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD VVD G EP+TVVD++G P+++R+G G
Sbjct: 167 VLDGVVDAGDCGKEPTTVVDLSGDEPEVLRRGAG 200
>gi|444376624|ref|ZP_21175864.1| YciO family [Enterovibrio sp. AK16]
gi|443679270|gb|ELT85930.1| YciO family [Enterovibrio sp. AK16]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V + PTD+ YA+ C L++ A+ER+ RI+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIVRNGGVIIYPTDSGYALGCQLENKQALERICRIRRLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y R D +R +++ PG YTFIL A+KEVP++ +
Sbjct: 64 NFTLMCRDLSELSVYA----RVDNSA----YRLIRNNTPGCYTFILKATKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I +L+ + P++STS+ + DP I D
Sbjct: 114 ------PKRKTIGIRVPDNQIALDLLEALGEPMMSTSLILPGNEHTESDPEAIRDQL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D++ P+I+R+G G
Sbjct: 167 AVDCILNGGYLGEQPTTVIDLSEDEPEILRRGTG 200
>gi|94266276|ref|ZP_01289981.1| Sua5/YciO/YrdC/YwlC [delta proteobacterium MLMS-1]
gi|93453127|gb|EAT03598.1| Sua5/YciO/YrdC/YwlC [delta proteobacterium MLMS-1]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 19/216 (8%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +E +P ++ VVE L++GAV PTDT+Y I CD+ + A++R+ ++K
Sbjct: 1 MLLEINPDNPQPRLIKRVVEALRQGAVICYPTDTVYGIGCDIFNQKAVKRIYQLKCRPLG 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+P S +C L++I Y G +R ++ LPGPYTF+L A+K VPK
Sbjct: 61 QPFSFICADLKEISNYAHVSNTG--------YRVMRKSLPGPYTFVLPATKLVPK----- 107
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
S +K VG+R+P++ IC ++ + P+++TS + + + + YG
Sbjct: 108 ----IMMSKQKTVGIRVPDNRICLELVAGLGNPILTTSAAPDDPDSRQLLAFEVDERYG- 162
Query: 181 EGLDFVVDGG-VRVAEPSTVVDMTGTYPKIIRQGKG 215
+D+ +D G + VA+PSTVV M ++R GKG
Sbjct: 163 HLVDYTIDSGPLTVAQPSTVVSMVDDELTVLRPGKG 198
>gi|398945263|ref|ZP_10671684.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM41(2012)]
gi|398157164|gb|EJM45566.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM41(2012)]
Length = 222
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRSGGVVIYPTDSSYAIGCQIGDKNAVERVRRLRGLDDKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + +FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGLFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ + + M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGETDPMTDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPTPFMAE 221
>gi|297250433|ref|ZP_06864286.2| Sua5/YciO/YrdC/YwlC family protein [Neisseria polysaccharea ATCC
43768]
gi|296838895|gb|EFH22833.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria polysaccharea ATCC
43768]
Length = 239
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 37 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDQKH 96
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 97 HLTLVCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 145
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I D
Sbjct: 146 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRDRL-E 198
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG +P+TV+DMT GT +++RQG G
Sbjct: 199 HAVDLVIDGGWCGTDPTTVIDMTDGT--ELVRQGCG 232
>gi|424776991|ref|ZP_18203966.1| translation factor [Alcaligenes sp. HPC1271]
gi|422888031|gb|EKU30425.1| translation factor [Alcaligenes sp. HPC1271]
Length = 208
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%), Gaps = 17/192 (8%)
Query: 24 EGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRG 83
+G + +PTD+ YA+V L SA + LRR++ ++ L++LCR L +I + F +
Sbjct: 26 KGGLLAIPTDSSYAVVARLDDKSAADNLRRLRGLDDRHHLTLLCRDLAEI----SHFAKV 81
Query: 84 DGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAIC 143
D +R +K PGP+TFIL A+KEVP++ + RK +G+R+P+ +
Sbjct: 82 DNPQ----YRLLKMATPGPWTFILEATKEVPRRV--------SHPSRKTIGIRVPDQKVA 129
Query: 144 QAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMT 203
A+++++ +PLIST++ ++E + D I D Y + L VVDGG + +TV+D+T
Sbjct: 130 LALMEEVGSPLISTTLIPEGEDEPLNDAQEILDRYAHQ-LAAVVDGGPCPLQATTVIDLT 188
Query: 204 GTYPKIIRQGKG 215
G P+++R+G G
Sbjct: 189 GPTPEVLRRGSG 200
>gi|156933738|ref|YP_001437654.1| hypothetical protein ESA_01564 [Cronobacter sakazakii ATCC BAA-894]
gi|156531992|gb|ABU76818.1| hypothetical protein ESA_01564 [Cronobacter sakazakii ATCC BAA-894]
Length = 183
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 111/195 (56%), Gaps = 19/195 (9%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
+++G V V PTD+ YA+ C L+ A+ER+ RI+++ +++CR L ++ TY+
Sbjct: 1 MRKGGVIVYPTDSGYALGCKLEDKGAMERICRIRDLPDGHNFTLMCRDLSELSTYSY--- 57
Query: 82 RGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++
Sbjct: 58 ------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGLRVPSN 103
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I A+L+ +D P++STS+ DP I D + +D ++ GG +P+TV+
Sbjct: 104 PIALALLEALDEPMLSTSLMLPGSEFTESDPDEIKDRLEKQ-VDLIIHGGYLGQQPTTVI 162
Query: 201 DMTGTYPKIIRQGKG 215
D+T P ++R+G G
Sbjct: 163 DLTDDAPVVLREGVG 177
>gi|428773470|ref|YP_007165258.1| translation factor SUA5 [Cyanobacterium stanieri PCC 7202]
gi|428687749|gb|AFZ47609.1| translation factor SUA5 [Cyanobacterium stanieri PCC 7202]
Length = 217
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 116/209 (55%), Gaps = 28/209 (13%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
+E + + LK+GA+ + PTDT+YAI CDL + SA++++R+IK + KPL+ LC SL I
Sbjct: 17 IEQITDALKQGAIMLYPTDTVYAIGCDLNAKSAVQKVRQIKQLSSDKPLTFLCSSLSHIS 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVG 134
Y +R +K +PGPYTF+L +K VPK + RK G
Sbjct: 77 EYAVVTDEA--------YRIMKRLIPGPYTFVLPTTKLVPKLVMS--------PKRKTTG 120
Query: 135 VRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDG----- 189
+R+P++ ICQ++L ++ P+ISTS + D+E + L+ +VD
Sbjct: 121 IRVPDNNICQSLLASLNNPIISTSGHF-PDDEGKYPSYNWEKARLFDHLEKLVDIIIDND 179
Query: 190 ---GVRVAEPSTVVDMTGTYPKIIRQGKG 215
G++V ST++D++ + P++IR+G G
Sbjct: 180 DDPGLKV---STILDLSTSEPEVIRKGLG 205
>gi|383780289|ref|YP_005464855.1| hypothetical protein AMIS_51190 [Actinoplanes missouriensis 431]
gi|381373521|dbj|BAL90339.1| hypothetical protein AMIS_51190 [Actinoplanes missouriensis 431]
Length = 206
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 117/219 (53%), Gaps = 18/219 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + +V+LL++ + PTD+ +A+ C + + ++R+R I++++
Sbjct: 4 YFDVHPDNPQQRSIHQIVDLLRQDGLIAYPTDSCFALGCRMGNKDGLDRIRAIRHLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + Q + ++FRAVK PGPYTFIL A+KEVP++ +
Sbjct: 64 HFTLMCHDFAQLGQFV--------QINNSLFRAVKASTPGPYTFILPATKEVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRI + QAIL ++ PL+S+++ + E M+ I +
Sbjct: 113 -----HPKKKTVGVRITSHVTAQAILAELGEPLVSSTLLLPGEAEPMIHGWEIKEALD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLY 219
+D VVD G EP+TV+D++ P+I+R G G P L+
Sbjct: 167 SVDAVVDSGECGTEPTTVIDLSDGVPEILRVGAGDPSLF 205
>gi|332876662|ref|ZP_08444421.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045125|ref|ZP_09106766.1| Sua5/YciO/YrdC/YwlC family protein [Paraprevotella clara YIT 11840]
gi|332685367|gb|EGJ58205.1| Sua5/YciO/YrdC/YwlC family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355531970|gb|EHH01362.1| Sua5/YciO/YrdC/YwlC family protein [Paraprevotella clara YIT 11840]
Length = 202
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 120/222 (54%), Gaps = 23/222 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + ++ +++L++G + + PTDT+YAI CD + A+ER+ +K V P
Sbjct: 1 MLIRIYPENPNPREMAKALKMLRDGELIIYPTDTVYAIGCDALNVRAVERICALKGVNPQ 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LSI+C L +I Y Q F+ +K LPGP+TFIL S +PK
Sbjct: 61 KSNLSIICYDLSNISEY--------AQVSNAAFKLLKKNLPGPFTFILPTSSRLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTY 178
Y +K VG+R+P+++I + ++ + P+++ SV + E+ DP +I + Y
Sbjct: 109 ------IYKNKKEVGIRVPDNSIARGLVDGLGNPILTMSVHDEDEIIEYSTDPELIHEKY 162
Query: 179 GPEG-LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLY 219
EG + V+DGG +E STVV+ +++RQGKG L+
Sbjct: 163 --EGRVALVIDGGYGGSEASTVVNCVDDAFEVVRQGKGELLF 202
>gi|421560602|ref|ZP_16006459.1| telomere recombination family protein [Neisseria meningitidis
NM2657]
gi|254671067|emb|CBA07959.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|402339949|gb|EJU75155.1| telomere recombination family protein [Neisseria meningitidis
NM2657]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|398863460|ref|ZP_10619025.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM78]
gi|398247672|gb|EJN33108.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM78]
Length = 222
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKVAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D++ M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDDDPMTDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPAPFMVE 221
>gi|404401879|ref|ZP_10993463.1| hypothetical protein PfusU_19011 [Pseudomonas fuscovaginae UPB0736]
Length = 209
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ V+++++G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVDIIRKGGVVIYPTDSSYAIGCQIGDKNAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + +FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFALICADLSQLGLFA--------KVDTGLFRLLKAHTPGPYTFILNATREVPRLLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+RIP+ I A+L + PL+S S+ ++E M+DP I +
Sbjct: 113 -----HPKKRTIGLRIPSHPIALALLAEFGEPLMSVSLIMPGESEPMIDPYEIRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGLKASTVINLADGEPQVVRVGCGDPAPFMVE 208
>gi|386773991|ref|ZP_10096369.1| translation factor SUA5 [Brachybacterium paraconglomeratum LC44]
Length = 211
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y++ P +E V L+EG + PTD+ YA+ C L +ER+RRI+ V
Sbjct: 10 YLDIHPEDPQPRLIEQAVAALEEGGLIAYPTDSCYALGCRLGDADGLERIRRIRQVGKDH 69
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + Y FR VK+ PGPYTFIL A++EVP+K
Sbjct: 70 HFTLVCADFAQLGQYVL--------VSNPTFRLVKNATPGPYTFILPATREVPRKMAHP- 120
Query: 122 TTTAKYSLRKH-VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+KH VGVRIP+ + A+++ + P++S+++ + + V+ D G
Sbjct: 121 --------KKHTVGVRIPDHRVAHALVEALGEPILSSTLLLPGQEDPPSEGWVVQDLLG- 171
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E +D ++D G EP+TVVD+TG+ P I R+G G
Sbjct: 172 EQVDVIIDSGEVGIEPTTVVDLTGSEPVIAREGAG 206
>gi|242239361|ref|YP_002987542.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya dadantii Ech703]
gi|242131418|gb|ACS85720.1| Sua5/YciO/YrdC/YwlC family protein [Dickeya dadantii Ech703]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 115/197 (58%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V++L++G V V PTD+ YA+ C L+ +A+ER+ RI+N++ +++CR L ++ +Y
Sbjct: 21 VDILRKGGVIVYPTDSGYALGCMLEDKTAMERICRIRNLDQHHNFTLMCRDLSELSSY-- 78
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P
Sbjct: 79 ------AYVDNAAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGMRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L ++AP++ST++ ++ DP I + G + +D V+ GG +P+T
Sbjct: 125 SNPIALELLAALNAPMMSTTLMLPGNDFAESDPEEIQEHLGKQ-VDLVIHGGFLGQQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D+T P+++R G G
Sbjct: 184 VIDLTEPAPQVVRDGSG 200
>gi|397165628|ref|ZP_10489077.1| hypothetical protein Y71_5696 [Enterobacter radicincitans DSM
16656]
gi|396092910|gb|EJI90471.1| hypothetical protein Y71_5696 [Enterobacter radicincitans DSM
16656]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ ++ P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALNEPMLSTSLMLPGSDFTESDPDEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|417855729|ref|ZP_12500811.1| hypothetical protein AAUPMG_03964 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338215584|gb|EGP01842.1| hypothetical protein AAUPMG_03964 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 207
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 18/210 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ +I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSL--------VNNMAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++S S+ ++N DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEIRDRLEKQ-VDL 171
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG AEP+TVVD+T P IIR+G G
Sbjct: 172 IIHGGYLGAEPTTVVDLTNDTPIIIREGSG 201
>gi|449328117|gb|AGE94418.1| hypothetical protein [Citrobacter amalonaticus Y19]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I +LQ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALELLQTLGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|300777696|ref|ZP_07087554.1| Sua5/YciO/YrdC/YwlC family protein [Chryseobacterium gleum ATCC
35910]
gi|300503206|gb|EFK34346.1| Sua5/YciO/YrdC/YwlC family protein [Chryseobacterium gleum ATCC
35910]
Length = 203
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 113/202 (55%), Gaps = 24/202 (11%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDIDTY 76
V++ L G + + P+DT+YA+ C++ A+E+L ++K ++ K SI+C L + +
Sbjct: 20 VIKTLNNGGLIIYPSDTVYALGCNIFDIKAMEKLAQLKKMKLEKSKFSIICNDLSHLSDF 79
Query: 77 TTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVR 136
T ++FR +K LPGP+TFIL A+K +P Y K +G+R
Sbjct: 80 TRPI-------DTSVFRFLKSHLPGPFTFILEANKSLP----------LAYKGHKTIGIR 122
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDNE---WMVDPVVIADTYGPEGLDFVVDGGVRV 193
+P+ I Q I++K+ P+ STS+K D+E + DP +IA+ Y +D V+D G
Sbjct: 123 VPDHPIPQLIVEKLGHPIASTSIK--DDDEIIEYSTDPELIAEKYD-HLVDIVIDSGYGD 179
Query: 194 AEPSTVVDMTGTYPKIIRQGKG 215
ST+VD+T P+IIRQGKG
Sbjct: 180 NVASTIVDLTSGEPEIIRQGKG 201
>gi|15602527|ref|NP_245599.1| hypothetical protein PM0662 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|378774369|ref|YP_005176612.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida 36950]
gi|383310331|ref|YP_005363141.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|386834193|ref|YP_006239508.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida subsp.
multocida str. 3480]
gi|421252274|ref|ZP_15707991.1| hypothetical protein AAUPMB_06993 [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
gi|421263399|ref|ZP_15714448.1| hypothetical protein KCU_03511 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425065523|ref|ZP_18468643.1| YciO family [Pasteurella multocida subsp. gallicida P1059]
gi|12720939|gb|AAK02746.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|356596917|gb|AET15643.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida 36950]
gi|380871604|gb|AFF23971.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|385200894|gb|AFI45749.1| Sua5/YciO/YrdC/YwlC family protein [Pasteurella multocida subsp.
multocida str. 3480]
gi|401689591|gb|EJS84996.1| hypothetical protein KCU_03511 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401696431|gb|EJS89217.1| hypothetical protein AAUPMB_06993 [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
gi|404383899|gb|EJZ80344.1| YciO family [Pasteurella multocida subsp. gallicida P1059]
Length = 207
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 18/210 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ +I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSL--------VNNMAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++S S+ ++N DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEIRDRLEKQ-VDL 171
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG AEP+TVVD+T P IIR+G G
Sbjct: 172 IIHGGYLGAEPTTVVDLTNDTPIIIREGSG 201
>gi|121608594|ref|YP_996401.1| Sua5/YciO/YrdC/YwlC family protein [Verminephrobacter eiseniae
EF01-2]
gi|121553234|gb|ABM57383.1| Sua5/YciO/YrdC/YwlC family protein [Verminephrobacter eiseniae
EF01-2]
Length = 211
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 21/219 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
Y E P L LL++G + VPTD+ YA+ C L A ERLRRI+ V+
Sbjct: 3 QYFEIHPDNPQPRLLRQAAALLRQGGIVAVPTDSSYALACHLDDKDAAERLRRIRQVDDK 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L++LCR L ++ + R D + +R ++ PGPYTFIL A++EVP++
Sbjct: 63 HHLTLLCRDLSELASCA----RVDNRQ----YRLLRLGTPGPYTFILEATREVPRRV--- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+R+P+ Q +LQ APL++T++ +E + DP I Y
Sbjct: 112 -----SHPARKTLGLRVPDHKGLQLLLQLHGAPLLATTLIPAGASEPLNDPQEIRRHYAG 166
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
+ L +VD G EP+TV+D+T G P+++R G+G
Sbjct: 167 Q-LAAIVDAGACPREPTTVLDLTPMGVGGAPEVVRAGRG 204
>gi|425063350|ref|ZP_18466475.1| YciO family [Pasteurella multocida subsp. gallicida X73]
gi|404382913|gb|EJZ79370.1| YciO family [Pasteurella multocida subsp. gallicida X73]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 18/210 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ +I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSL--------VNNMAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++S S+ ++N DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEIRDRLEKQ-VDL 171
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG AEP+TVVD+T P IIR+G G
Sbjct: 172 IIHGGYLGAEPTTVVDLTNDTPIIIREGSG 201
>gi|260550969|ref|ZP_05825174.1| yrdC domain-containing protein [Acinetobacter sp. RUH2624]
gi|424056733|ref|ZP_17794250.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter nosocomialis
Ab22222]
gi|425740253|ref|ZP_18858427.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-487]
gi|445432715|ref|ZP_21439388.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC021]
gi|260405917|gb|EEW99404.1| yrdC domain-containing protein [Acinetobacter sp. RUH2624]
gi|407440266|gb|EKF46783.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter nosocomialis
Ab22222]
gi|425495020|gb|EKU61210.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-487]
gi|444758053|gb|ELW82555.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii
OIFC021]
Length = 205
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P ++ VE ++ G V V PTD YAI C + + +A+ER+ +I+++ P
Sbjct: 2 LHLHVHPENPQQRLIDQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRDLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIESQLS- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR G G
Sbjct: 165 KRIDVFIDGGFGTLTTTSIVDLSGEHPEIIRHGAG 199
>gi|90021364|ref|YP_527191.1| hypothetical protein Sde_1719 [Saccharophagus degradans 2-40]
gi|89950964|gb|ABD80979.1| Sua5/YciO/YrdC/YwlC [Saccharophagus degradans 2-40]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V++++ G + PTD+ YA+ C + A++R+R I+ ++
Sbjct: 4 FFSIHPENPQARLISQSVDIVRRGGLIAYPTDSAYALGCHIGDKLALDRIRAIRQLDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + +FR +K PG YTFIL A+ EVP++ +
Sbjct: 64 NFTLMCRDLSELANY--------AKVDNAVFRLIKSHTPGAYTFILPATSEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+PN+ I A++ + PL+S+S+ D + DP I ++ +
Sbjct: 113 -----HPKRKTLGLRVPNNPIALALMDALGEPLMSSSLILPGDTVPLTDPYDIRESLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ V+DGG EP+TVVD+TG P + R G G
Sbjct: 168 -LELVIDGGYCGMEPTTVVDLTGDEPVVTRVGCG 200
>gi|389707902|ref|ZP_10186542.1| putative translation factor [Acinetobacter sp. HA]
gi|388610521|gb|EIM39641.1| putative translation factor [Acinetobacter sp. HA]
Length = 205
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLRLHPDNPQPRLISQAVERIRAGDVIVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+ILC L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAILCCDLSDIATY--------AKVDNAVYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ +CQ +LQ++ PL+++++ + M DP I G
Sbjct: 112 ------HPKKKTIGLRIPSNPVCQMLLQELGEPLLTSTLILPDQTDPMDDPYEIEMQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G+ +++VD++G P++IR+G G
Sbjct: 165 KRIDVFIDSGLGTLSTTSIVDLSGDQPEVIRRGVG 199
>gi|410633461|ref|ZP_11344105.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
arctica BSs20135]
gi|410146962|dbj|GAC20972.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
arctica BSs20135]
Length = 206
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ EL+ +GAV V PTD+ Y+I C + +A+E+L RI+ ++ +++
Sbjct: 9 PENPQVRLIKQACELIHQGAVVVYPTDSGYSIGCHMNDKAALEQLCRIRQIDKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y R D FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEYA----RVDNTA----FRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+RIP++ I A+L+++ PL+ST++ +P I D + + +
Sbjct: 113 NPKRRTIGIRIPDNKIALALLEELGEPLMSTTLILPGALIAESNPDDIRDELEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TV+DM+ IIR+G G
Sbjct: 172 IHGGFLGEQPTTVIDMSEGENTIIREGSG 200
>gi|410618031|ref|ZP_11328993.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
polaris LMG 21857]
gi|410162455|dbj|GAC33131.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Glaciecola
polaris LMG 21857]
Length = 206
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ EL+ G V V PTD+ Y+I C + +A+E++ RI+ + +++
Sbjct: 9 PDNPQARLIKQACELIHNGEVVVYPTDSGYSIGCHMDDKNALEQICRIRQIGKDHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y Q FR +K+ PGPYTFIL A+KEVPK+ +
Sbjct: 69 CRDMSELSEY--------AQVDNAAFRMIKNNTPGPYTFILKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
R+ +G+R+PN+ I A+L+++ P++ST++ DP I D + + +
Sbjct: 113 NPKRRTIGIRVPNNPIALALLEELGEPMMSTTLILPNAVVAESDPDEIRDKLEKQ-VGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG +P+TVVD++ P +IR+G G
Sbjct: 172 IHGGFLGEQPTTVVDLSDGEPVVIREGSG 200
>gi|416176680|ref|ZP_11609791.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M6190]
gi|416190549|ref|ZP_11615798.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis ES14902]
gi|433491936|ref|ZP_20449036.1| telomere recombination family protein [Neisseria meningitidis
NM586]
gi|433502273|ref|ZP_20459243.1| telomere recombination family protein [Neisseria meningitidis
NM126]
gi|325132982|gb|EGC55659.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M6190]
gi|325138970|gb|EGC61520.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis ES14902]
gi|432230337|gb|ELK86014.1| telomere recombination family protein [Neisseria meningitidis
NM586]
gi|432242947|gb|ELK98462.1| telomere recombination family protein [Neisseria meningitidis
NM126]
Length = 206
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVIDMTDGT--ELVRQGCG 199
>gi|262280082|ref|ZP_06057867.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter calcoaceticus
RUH2202]
gi|424745861|ref|ZP_18174120.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-141]
gi|262260433|gb|EEY79166.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter calcoaceticus
RUH2202]
gi|422941680|gb|EKU36745.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-141]
Length = 205
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M++ P + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 MHLHVHPENPQQRLISQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + +R +K P TFIL A+ EVP++ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNATYRLLKANTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ ICQA+L+++ PL+++++ + + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLD- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G +P+IIR+G G
Sbjct: 165 KRIDVFIDGGFGTLTSTSIVDLSGEHPEIIRRGIG 199
>gi|282899761|ref|ZP_06307724.1| Sua5/YciO/YrdC/YwlC [Cylindrospermopsis raciborskii CS-505]
gi|281195376|gb|EFA70310.1| Sua5/YciO/YrdC/YwlC [Cylindrospermopsis raciborskii CS-505]
Length = 217
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 30/224 (13%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E P + ++E + L GAV + PTDT+YAI CDL + SA+ER+++IK + KP
Sbjct: 5 LEIHPDNPQNRRIEDIRLALSGGAVMLYPTDTVYAIGCDLNAKSAVERVKKIKRLANDKP 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
L+ LC SL + TY F +R +K +PGPYTF+L A+K VP+
Sbjct: 65 LTFLCPSLSRVATY--AFVSDIA------YRIMKSLIPGPYTFLLPATKLVPR------- 109
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYGP- 180
+ RK G+R+PN +C A+L+ + P+ISTS L D M D V D +
Sbjct: 110 -LVQNPKRKTTGIRVPNHHLCLALLESLGNPIISTSAHLPLHD---MDDLNVDIDIHPSK 165
Query: 181 ----EGLDFVVDGGVRVAEP-----STVVDMTGTYPKIIRQGKG 215
+ LD +VD + E ST++D+T P I R+G G
Sbjct: 166 MDLFDRLDSLVDIIIDTGEEPKNQVSTILDLTDNQPIITRKGMG 209
>gi|345868475|ref|ZP_08820461.1| uncharacterized protein yciO [Bizionia argentinensis JUB59]
gi|344047115|gb|EGV42753.1| uncharacterized protein yciO [Bizionia argentinensis JUB59]
Length = 206
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 24/206 (11%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRD 72
+++ VV++LK G + + PTDT+Y + CD+ + A+E++ RIK V+ K S +C L +
Sbjct: 16 EIKRVVDVLKRGGLIIYPTDTVYGLGCDITNVKALEKIARIKGVKLEKSNFSFICHDLSN 75
Query: 73 IDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH 132
+ Y Q + F+ +K LPGPYTFIL +K +P + + +K
Sbjct: 76 LSDYVK-------QIDSATFKILKRALPGPYTFILPGAKSLP----------SVFKKKKT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEGLDFVVDG 189
VG+R+P++ I I++++ P+ISTS++ D+ E+ DP +I + + +D V+D
Sbjct: 119 VGIRVPSNNIALEIVKQLGNPIISTSIR--DDDSVLEYTTDPELILEKWN-NLVDLVIDA 175
Query: 190 GVRVAEPSTVVDMTGTYPKIIRQGKG 215
G STV+D++ P I+R+GKG
Sbjct: 176 GYGDNVASTVIDLSEETPIIVREGKG 201
>gi|399024177|ref|ZP_10726223.1| Sua5/YciO/YrdC/YwlC family protein [Chryseobacterium sp. CF314]
gi|398081051|gb|EJL71836.1| Sua5/YciO/YrdC/YwlC family protein [Chryseobacterium sp. CF314]
Length = 203
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 24/213 (11%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSI 65
P + V++ L G + + P+DT+YA+ C++ A+E+L ++K ++ K SI
Sbjct: 9 PENPQENLINEVIKTLNNGGLIIYPSDTVYALGCNIFDIRAMEKLAQMKKIKLEKAQFSI 68
Query: 66 LCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
+C L + +T ++FR +K LPGP+TFIL A+K VP
Sbjct: 69 ICNDLSHLSDFTRPI-------DTSVFRFLKSHLPGPFTFILEANKNVP----------L 111
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEG 182
Y K +G+R+P+ I Q I++K+ P+ STS+K D+ E+ DP +IA+ Y
Sbjct: 112 AYKGHKTIGIRVPDHPIPQLIVEKLGHPIASTSIK--DDDEIIEYSTDPELIAEKY-EHL 168
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G ST+VD++ P++IRQGKG
Sbjct: 169 VDIVIDSGYGDNIASTIVDLSSGEPEVIRQGKG 201
>gi|237731719|ref|ZP_04562200.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|365107311|ref|ZP_09335645.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter freundii
4_7_47CFAA]
gi|226907258|gb|EEH93176.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|363641420|gb|EHL80812.1| Sua5/YciO/YrdC/YwlC family protein [Citrobacter freundii
4_7_47CFAA]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKLVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|261253232|ref|ZP_05945805.1| YrdC family protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954765|ref|ZP_12597796.1| putative translation factor [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260936623|gb|EEX92612.1| YrdC family protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814736|gb|EGU49671.1| putative translation factor [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGP+TFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNGA----FRLLKNNTPGPFTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S RK +G+R+P++ I +L+ + PL+STS+ ++ DP I D
Sbjct: 114 ------SKRKTIGIRVPDNRIALDLLEALGEPLMSTSLILPGNDITESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + PK+ R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVIDFSDDEPKVARLGSG 200
>gi|262375678|ref|ZP_06068910.1| yrdC domain-containing protein [Acinetobacter lwoffii SH145]
gi|262309281|gb|EEY90412.1| yrdC domain-containing protein [Acinetobacter lwoffii SH145]
Length = 205
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + VE ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLRVHPDNPQPRLISQAVERIRAGDVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+ILC L DI TY + ++R +K+ P TFIL A+ EVP++ +
Sbjct: 62 HQYAILCCDLSDIATY--------AKVDNAMYRLLKNNTPAITTFILPATSEVPRRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIPN+ +CQ +L+++ PL+++++ + + DP I G
Sbjct: 112 ------HPKKKTIGLRIPNNPVCQMLLKELGEPLLTSTLILPGQTDPLDDPYDIEMQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D VD G+ +++VD++G +P+++R+G G
Sbjct: 165 KRIDVFVDSGLGTLSTTSIVDLSGDHPEVMRRGMG 199
>gi|54309647|ref|YP_130667.1| translation factor [Photobacterium profundum SS9]
gi|46914085|emb|CAG20865.1| putative translation factor [Photobacterium profundum SS9]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPETPQARLMTQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR ++ PG YTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEIANYA----RVDNAA----FRLLRSNTPGAYTFIFKGTKEVPRRLMS-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+RIPN+AI A+L+++ PL+STS+ + DP I D
Sbjct: 114 ------PKRKTIGIRIPNNAIALALLEELGEPLMSTSLILPNSDVAESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + +++R G G
Sbjct: 167 AVDLIMNGGYLGEQPTTVIDFSNDEMEVLRVGAG 200
>gi|399031724|ref|ZP_10731594.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacterium sp. CF136]
gi|398069909|gb|EJL61236.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacterium sp. CF136]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + VV++L+ G + + PTDT+Y + CD+ + A+ER+ +IK V+ K
Sbjct: 4 FIKIYPDKPSEAAIAKVVKVLQNGGLVIYPTDTVYGLGCDITNSRALERIAKIKGVKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFICHDLSNLSDYVR-------QIDTATFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
++ + VG+R+P++ I I++++ P++STS++ D E+ DP +I + +
Sbjct: 112 -----EFKKKTTVGIRVPDNNIALEIVRQLGNPIVSTSIRDEDDVIEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST++D++ P I+R+GKG
Sbjct: 166 QNLVDLVIDGGYGDNVGSTIIDLSEHEPVIVREGKG 201
>gi|343499236|ref|ZP_08737221.1| YrdC family protein [Vibrio tubiashii ATCC 19109]
gi|418478853|ref|ZP_13047946.1| hypothetical protein VT1337_10597 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342823214|gb|EGU57866.1| YrdC family protein [Vibrio tubiashii ATCC 19109]
gi|384573403|gb|EIF03897.1| hypothetical protein VT1337_10597 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V + PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVIYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + PL+STS+ ++ DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNQIALDLLEALGEPLMSTSLILPGNDMTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSNDEPIIARVGSG 200
>gi|392544274|ref|ZP_10291411.1| RNA binding protein [Pseudoalteromonas piscicida JCM 20779]
gi|409200193|ref|ZP_11228396.1| RNA binding protein [Pseudoalteromonas flavipulchra JG1]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + +++++G V V PTD+ YAI C+L + A ER+ RI+ +E
Sbjct: 4 FFHIHPDNPQTRLIRQAADIIEQGGVVVFPTDSGYAIGCNLGNKQAKERIERIRGIEKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ TY R D Q +FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSTYA----RVDNQ----MFRMIKNNTPGPYTFIFKGTKEVPRRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+ ++ I A+L+ + PL+S S+ + DP I +
Sbjct: 114 ------EKKKTIGIRVTDNPITCALLEALGEPLMSCSLILPGEQFTESDPDDIRMRL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GG + + +TV+DM+ +I+R+G G
Sbjct: 167 HVDLIIHGGYLIEQATTVIDMSEDTIEILRRGCG 200
>gi|336315227|ref|ZP_08570138.1| Sua5/YciO/YrdC/YwlC family protein [Rheinheimera sp. A13L]
gi|335880204|gb|EGM78092.1| Sua5/YciO/YrdC/YwlC family protein [Rheinheimera sp. A13L]
Length = 206
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ V ++K+G V + PTD+ YA+ C + +A+ER+ +I+ +
Sbjct: 4 FFYVHPENPQQRLIKQAVHIIKQGGVVIYPTDSGYALGCHIGDKAALERILQIRQMSTEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR ++ Y + + FR +K+ PG YTFIL +KEVPK+ +
Sbjct: 64 HFTLMCRDFSELSVY--------AKVENSAFRLIKNHTPGAYTFILKGTKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K VG+RIP + I A+L+++ P++S+S+ ++ DP + D +
Sbjct: 114 ------DKKKTVGLRIPQNKIALALLEELGEPMMSSSLVLPGNDFAEADPEEMRDQLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GGV +TV+D++ P +IRQG G
Sbjct: 168 -VDLIIHGGVIAENHTTVIDLSEDNPVVIRQGAG 200
>gi|421541767|ref|ZP_15987882.1| hypothetical protein NMEN255_0395 [Neisseria meningitidis NM255]
gi|402319247|gb|EJU54758.1| hypothetical protein NMEN255_0395 [Neisseria meningitidis NM255]
Length = 206
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRECL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|421564656|ref|ZP_16010453.1| hypothetical protein NMEN3081_0486 [Neisseria meningitidis NM3081]
gi|402345779|gb|EJU80885.1| hypothetical protein NMEN3081_0486 [Neisseria meningitidis NM3081]
Length = 206
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVIDMTDGT--ELVRQGCG 199
>gi|377578989|ref|ZP_09807962.1| hypothetical protein YciO [Escherichia hermannii NBRC 105704]
gi|377539638|dbj|GAB53127.1| hypothetical protein YciO [Escherichia hermannii NBRC 105704]
Length = 206
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C L+ A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVDIVRKGGVIVYPTDSGYALGCKLEDKRALERISRIRQLPNGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +K+VP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLIKNNTPGNYTFILKGTKDVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ ++ P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLETLNEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P +IR+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVIREGVG 200
>gi|440683618|ref|YP_007158413.1| translation factor SUA5 [Anabaena cylindrica PCC 7122]
gi|428680737|gb|AFZ59503.1| translation factor SUA5 [Anabaena cylindrica PCC 7122]
Length = 219
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 34/223 (15%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + +++ + L GA+ + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQNRRIDEIKLALSSGAIMLYPTDTVYAIGCDLNAKSAVERVRQIKQLANDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PGPYTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDTA------YRMMKRLIPGPYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLK----------DNEWMVDPVVIAD 176
RK G+R+P+ +C ++L+ + P+ISTS D+E ++ V + D
Sbjct: 113 SPKRKTTGIRVPDHTVCLSLLEALGNPIISTSAHLPPNDIDDEIVGIDSESILSRVELFD 172
Query: 177 TYGPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+D ++D G EP ST++D+T P I R+G G
Sbjct: 173 RLD-NLVDIIIDTG---EEPTSLVSTILDLTEEEPVITRRGLG 211
>gi|420371681|ref|ZP_14872049.1| hypothetical protein SF123566_2041 [Shigella flexneri 1235-66]
gi|391319012|gb|EIQ76092.1| hypothetical protein SF123566_2041 [Shigella flexneri 1235-66]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|157145596|ref|YP_001452915.1| hypothetical protein CKO_01342 [Citrobacter koseri ATCC BAA-895]
gi|157082801|gb|ABV12479.1| hypothetical protein CKO_01342 [Citrobacter koseri ATCC BAA-895]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PENPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +K+VP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKDVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|121635430|ref|YP_975675.1| hypothetical protein NMC1726 [Neisseria meningitidis FAM18]
gi|120867136|emb|CAM10903.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
Length = 254
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 52 FFAIHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 111
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+KEVP + +
Sbjct: 112 HLTLMCADLSELGTY--------AKIDNVQFRQLKAATPGPYTFILQATKEVPARTL--- 160
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 161 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 214
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 215 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 247
>gi|385327786|ref|YP_005882089.1| hypothetical protein NMBB_0480 [Neisseria meningitidis alpha710]
gi|385342547|ref|YP_005896418.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240149]
gi|385857860|ref|YP_005904372.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
NZ-05/33]
gi|416168458|ref|ZP_11607961.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
OX99.30304]
gi|416186529|ref|ZP_11613809.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M0579]
gi|308388638|gb|ADO30958.1| hypothetical protein NMBB_0480 [Neisseria meningitidis alpha710]
gi|325130804|gb|EGC53538.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
OX99.30304]
gi|325137003|gb|EGC59600.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M0579]
gi|325202753|gb|ADY98207.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240149]
gi|325208749|gb|ADZ04201.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
NZ-05/33]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|348169908|ref|ZP_08876802.1| SUA5/YciO/YrdC/YwlC family protein [Saccharopolyspora spinosa NRRL
18395]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + VV+++++ + PTD+ +A+ L + IER+R I++++
Sbjct: 4 YFDVHPENPQRRAINQVVDIVRDNGLIAYPTDSCFALGAQLGNKDGIERIRSIRHLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C++ + + + +FRA+K PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCQNFAQLGQFVII--------NNAVFRAIKASTPGSYTFILPATKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRIP+ + QA+L ++ P++S+++ + E M I D
Sbjct: 113 -----HPKKKTVGVRIPDHVVVQALLAELGEPMLSSTLLLPGEEEPMTQGWQIKDELD-H 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G EP+TV+D +G P+IIR+G G
Sbjct: 167 VLDAVIDSGECGTEPTTVIDFSGLEPEIIRRGAG 200
>gi|423140198|ref|ZP_17127836.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379052752|gb|EHY70643.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|71279291|ref|YP_270194.1| Sua5/YciO/YrdC/YwlC family protein [Colwellia psychrerythraea 34H]
gi|71145031|gb|AAZ25504.1| Sua5/YciO/YrdC/YwlC family protein [Colwellia psychrerythraea 34H]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ +++K+G V V PTD+ YA+ C L A+ER+ RI++++
Sbjct: 4 FFYVHPDNPQGRLMKQAADIIKQGGVIVYPTDSGYALGCHLGDKKALERICRIRDIDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L I YT R D +R +K PG YTFI SKEVPK+ +
Sbjct: 64 NFTLVCQDLSQISEYT----RVDNTA----YRLLKSNTPGAYTFIFKGSKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+P++ I QA+L ++ P++STS+ DP I D +
Sbjct: 114 ------PKKKTIGIRVPDNTIAQALLTELAEPIMSTSLIMPGQEMAEYDPEQIRDLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +V+GG P+TV+D + +IIR G+G
Sbjct: 168 -VDLIVNGGYLGEHPTTVIDFSNDSIEIIRVGEG 200
>gi|304386703|ref|ZP_07368976.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis ATCC
13091]
gi|304339218|gb|EFM05299.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis ATCC
13091]
Length = 224
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 22 FFAIHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 81
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+KEVP + +
Sbjct: 82 HLTLMCADLSELGTY--------AKIDNVQFRQLKAATPGPYTFILQATKEVPARTL--- 130
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 131 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 184
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 185 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 217
>gi|312971455|ref|ZP_07785630.1| yrdC domain protein [Escherichia coli 1827-70]
gi|415841457|ref|ZP_11522528.1| yrdC domain protein [Escherichia coli RN587/1]
gi|419375122|ref|ZP_13916158.1| yrdC domain protein [Escherichia coli DEC14B]
gi|420335610|ref|ZP_14837217.1| hypothetical protein SFK315_1367 [Shigella flexneri K-315]
gi|420341286|ref|ZP_14842791.1| hypothetical protein SFK404_1878 [Shigella flexneri K-404]
gi|420358853|ref|ZP_14859832.1| hypothetical protein SS322685_2640 [Shigella sonnei 3226-85]
gi|310336052|gb|EFQ01252.1| yrdC domain protein [Escherichia coli 1827-70]
gi|323187498|gb|EFZ72807.1| yrdC domain protein [Escherichia coli RN587/1]
gi|378222768|gb|EHX83003.1| yrdC domain protein [Escherichia coli DEC14B]
gi|391265243|gb|EIQ24216.1| hypothetical protein SFK315_1367 [Shigella flexneri K-315]
gi|391270765|gb|EIQ29652.1| hypothetical protein SFK404_1878 [Shigella flexneri K-404]
gi|391283446|gb|EIQ42066.1| hypothetical protein SS322685_2640 [Shigella sonnei 3226-85]
Length = 183
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 111/195 (56%), Gaps = 19/195 (9%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
+++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++CR L ++ TY+
Sbjct: 1 MRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF--- 57
Query: 82 RGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++
Sbjct: 58 ------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVPSN 103
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I QA+L+ + P++STS+ DP I D + +D ++ GG +P+TV+
Sbjct: 104 PIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDLIIHGGYLGQKPTTVI 162
Query: 201 DMTGTYPKIIRQGKG 215
D+T P ++R+G G
Sbjct: 163 DLTDDTPVVVREGVG 177
>gi|149923373|ref|ZP_01911780.1| Sua5/YciO/YrdC/YwlC family protein [Plesiocystis pacifica SIR-1]
gi|149815787|gb|EDM75311.1| Sua5/YciO/YrdC/YwlC family protein [Plesiocystis pacifica SIR-1]
Length = 212
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 23/219 (10%)
Query: 6 DPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEP--SKPL 63
DP D KL P VE L+ GAV + PTDT YA C L S+ I LR++K + +KPL
Sbjct: 13 DPERPDPRKLSPAVEALQRGAVIIYPTDTGYAFGCALSSNKGISTLRKLKGIHAKHAKPL 72
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++L +L D+ Y G FR V+ LPGPYT +L A+ +VP+
Sbjct: 73 TMLVETLNDMGRY--------GVMPNTAFRVVRRLLPGPYTMVLRATSDVPR-------- 116
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
A + VG+R+P+ +C +++ + PL++ S+ +D+ + DP + Y + +
Sbjct: 117 -AMKNRTGEVGMRLPDHKVCNLLVEHLGEPLLTGSLTPGEDSPELEDPAELEARYNRD-I 174
Query: 184 DFVVDGGVRVAEPSTVV--DMTGTYPKIIRQGKGPKLYW 220
++DGG EPSTV+ D G +++R+G+G W
Sbjct: 175 GLMIDGGHIWPEPSTVLRFDERGDI-EVLREGQGEIPNW 212
>gi|283785438|ref|YP_003365303.1| hypothetical protein ROD_17371 [Citrobacter rodentium ICC168]
gi|282948892|emb|CBG88494.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 206
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L D+ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSDLSTYSF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I +L + P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALELLAALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTDDSPVVLREGVG 200
>gi|385323563|ref|YP_005878002.1| hypothetical protein NMV_0479 [Neisseria meningitidis 8013]
gi|421539639|ref|ZP_15985798.1| hypothetical protein NMEN93004_0506 [Neisseria meningitidis 93004]
gi|421556493|ref|ZP_16002408.1| hypothetical protein NMEN80179_0542 [Neisseria meningitidis 80179]
gi|421558476|ref|ZP_16004358.1| hypothetical protein NMEN92045_0441 [Neisseria meningitidis 92045]
gi|421566864|ref|ZP_16012605.1| hypothetical protein NMEN3001_0403 [Neisseria meningitidis NM3001]
gi|433494017|ref|ZP_20451092.1| telomere recombination family protein [Neisseria meningitidis
NM762]
gi|433496199|ref|ZP_20453245.1| telomere recombination family protein [Neisseria meningitidis
M7089]
gi|433498283|ref|ZP_20455298.1| telomere recombination family protein [Neisseria meningitidis
M7124]
gi|433500219|ref|ZP_20457209.1| telomere recombination family protein [Neisseria meningitidis
NM174]
gi|433536282|ref|ZP_20492794.1| telomere recombination family protein [Neisseria meningitidis
77221]
gi|261391950|emb|CAX49412.1| conserved hypothetical protein [Neisseria meningitidis 8013]
gi|389605094|emb|CCA44018.1| putative ribosome maturation factor rimN [Neisseria meningitidis
alpha522]
gi|402321133|gb|EJU56612.1| hypothetical protein NMEN93004_0506 [Neisseria meningitidis 93004]
gi|402337166|gb|EJU72416.1| hypothetical protein NMEN80179_0542 [Neisseria meningitidis 80179]
gi|402338296|gb|EJU73533.1| hypothetical protein NMEN92045_0441 [Neisseria meningitidis 92045]
gi|402344807|gb|EJU79940.1| hypothetical protein NMEN3001_0403 [Neisseria meningitidis NM3001]
gi|432231808|gb|ELK87466.1| telomere recombination family protein [Neisseria meningitidis
NM762]
gi|432236564|gb|ELK92171.1| telomere recombination family protein [Neisseria meningitidis
M7124]
gi|432236965|gb|ELK92568.1| telomere recombination family protein [Neisseria meningitidis
M7089]
gi|432237406|gb|ELK93001.1| telomere recombination family protein [Neisseria meningitidis
NM174]
gi|432275171|gb|ELL30248.1| telomere recombination family protein [Neisseria meningitidis
77221]
Length = 206
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|407365716|ref|ZP_11112248.1| Sua5 family protein [Pseudomonas mandelii JR-1]
Length = 209
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + +A++R+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRGGGVVIYPTDSSYAIGCQIGDKNAVDRVRRLRGLDEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGVFA--------KIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + M DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDTDPMSDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPTPFMAE 208
>gi|262373289|ref|ZP_06066568.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313314|gb|EEY94399.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 205
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + V+ ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVDRIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ I QA+L+++ PL+++++ E + DP I + G
Sbjct: 112 ------HPKKKTIGLRIPSNPIAQALLKELGEPLLTSTLILPDQTEPLDDPYDIENQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +DGG +++VD++G P+I+R+G G
Sbjct: 165 KRIDVFIDGGFGTLSTTSIVDLSGENPEIVRRGVG 199
>gi|15676348|ref|NP_273484.1| hypothetical protein NMB0436 [Neisseria meningitidis MC58]
gi|7225661|gb|AAF40874.1| conserved hypothetical protein [Neisseria meningitidis MC58]
Length = 213
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 11 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 70
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 71 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 119
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 120 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 173
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 174 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 206
>gi|218768797|ref|YP_002343309.1| hypothetical protein NMA2049 [Neisseria meningitidis Z2491]
gi|385338622|ref|YP_005892495.1| hypothetical protein NMAA_1500 [Neisseria meningitidis WUE 2594]
gi|433474917|ref|ZP_20432262.1| telomere recombination family protein [Neisseria meningitidis
88050]
gi|433479058|ref|ZP_20436356.1| telomere recombination family protein [Neisseria meningitidis
63041]
gi|433512797|ref|ZP_20469597.1| telomere recombination family protein [Neisseria meningitidis
63049]
gi|433514895|ref|ZP_20471670.1| telomere recombination family protein [Neisseria meningitidis
2004090]
gi|433517025|ref|ZP_20473776.1| telomere recombination family protein [Neisseria meningitidis
96023]
gi|433519267|ref|ZP_20475990.1| telomere recombination family protein [Neisseria meningitidis
65014]
gi|433523413|ref|ZP_20480082.1| telomere recombination family protein [Neisseria meningitidis
97020]
gi|433528885|ref|ZP_20485492.1| telomere recombination family protein [Neisseria meningitidis
NM3652]
gi|433529695|ref|ZP_20486291.1| telomere recombination family protein [Neisseria meningitidis
NM3642]
gi|433531807|ref|ZP_20488375.1| telomere recombination family protein [Neisseria meningitidis
2007056]
gi|433533787|ref|ZP_20490335.1| telomere recombination family protein [Neisseria meningitidis
2001212]
gi|433541673|ref|ZP_20498119.1| telomere recombination family protein [Neisseria meningitidis
63006]
gi|121052805|emb|CAM09152.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
gi|319411036|emb|CBY91436.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
gi|432212074|gb|ELK68017.1| telomere recombination family protein [Neisseria meningitidis
88050]
gi|432218412|gb|ELK74270.1| telomere recombination family protein [Neisseria meningitidis
63041]
gi|432249623|gb|ELL05026.1| telomere recombination family protein [Neisseria meningitidis
63049]
gi|432255099|gb|ELL10430.1| telomere recombination family protein [Neisseria meningitidis
96023]
gi|432255955|gb|ELL11281.1| telomere recombination family protein [Neisseria meningitidis
2004090]
gi|432256195|gb|ELL11519.1| telomere recombination family protein [Neisseria meningitidis
65014]
gi|432261759|gb|ELL17005.1| telomere recombination family protein [Neisseria meningitidis
97020]
gi|432263989|gb|ELL19199.1| telomere recombination family protein [Neisseria meningitidis
NM3652]
gi|432268990|gb|ELL24154.1| telomere recombination family protein [Neisseria meningitidis
NM3642]
gi|432269286|gb|ELL24448.1| telomere recombination family protein [Neisseria meningitidis
2007056]
gi|432273031|gb|ELL28130.1| telomere recombination family protein [Neisseria meningitidis
2001212]
gi|432276505|gb|ELL31562.1| telomere recombination family protein [Neisseria meningitidis
63006]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRECL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|158338241|ref|YP_001519418.1| Sua5/YciO/YrdC/YwlC family protein [Acaryochloris marina MBIC11017]
gi|158308482|gb|ABW30099.1| Sua5/YciO/YrdC/YwlC family protein [Acaryochloris marina MBIC11017]
Length = 220
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 28/204 (13%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
L GAV + PTDT+YAI CD+ + +A++R+R+IK + KPL+ LC SL +I Y
Sbjct: 24 LLNGAVMLYPTDTVYAIGCDINAKAAVQRVRQIKQMSNDKPLTFLCSSLSNIAQY----- 78
Query: 82 RGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDA 141
+ + ++ ++ +PGPYTF+L A+K VPK + RK G+R+P+
Sbjct: 79 ---ARVSDSAYKIMRKLIPGPYTFLLPATKLVPK--------LVQNPKRKTTGIRVPDHP 127
Query: 142 ICQAILQKMDAPLISTSVK---------WLKDNEWMVDPVVIADTYGPEGLDFVVDGGVR 192
+C ++L + P+ISTS W K E + PV + D + + +D +++ G
Sbjct: 128 VCLSLLDSLATPIISTSAHFSDQESVHGWSKKQEPLT-PVELFDHFDKQ-VDLIIENGQD 185
Query: 193 VA-EPSTVVDMTGTYPKIIRQGKG 215
++ + ST++D+ P ++R+G G
Sbjct: 186 LSTKVSTILDLCQDQPAVVREGLG 209
>gi|395801530|ref|ZP_10480789.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacterium sp. F52]
gi|395436399|gb|EJG02334.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacterium sp. F52]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + VV++L+ G + + PTDT+Y + CD+ + A+E++ +IK V+ K
Sbjct: 4 FIKIYPDKPSEAAIAKVVKVLQNGGLVIYPTDTVYGLGCDITNSRALEKIAKIKGVKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q + + F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFICHDLSNLSDYVR-------QINTSTFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKD-NEWMVDPVVIADTYG 179
++ + VG+R+P++ I I++++ P++STS++ D E+ DP +I + +
Sbjct: 112 -----EFKKKTTVGIRVPDNNIILEIVRQLGNPVVSTSIRDEDDIIEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST++D++ P I+R+GKG
Sbjct: 166 QHLVDMVIDGGYGDNVGSTIIDLSEHEPVIVREGKG 201
>gi|229494439|ref|ZP_04388202.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus erythropolis SK121]
gi|453072087|ref|ZP_21975219.1| hypothetical protein G418_25091 [Rhodococcus qingshengii BKS 20-40]
gi|229318801|gb|EEN84659.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus erythropolis SK121]
gi|452758716|gb|EME17106.1| hypothetical protein G418_25091 [Rhodococcus qingshengii BKS 20-40]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + +VE+L+ AV PTD+ YA+ + +HS +R+R I+++
Sbjct: 4 YFDVHPENPQPRAISQIVEMLRNDAVIAYPTDSCYALGARMDNHSGTDRIREIRHLRSDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + + FRAVK PG YTFIL A+KEVP++
Sbjct: 64 HFTLVCADFAQLGHFV--------HVTNSAFRAVKAATPGQYTFILPATKEVPRRLA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K VGVRIP+ + +A+LQ++ P++S+++ E M D I + +
Sbjct: 113 -----HAKKKTVGVRIPSHPVVRALLQELGEPILSSTLLLPGAEEPMTDGWQIKEELDHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G EP+TVVD + P+I+R G G
Sbjct: 168 -LDAVIDSGDCGTEPTTVVDYSSGVPEIVRVGAG 200
>gi|429334912|ref|ZP_19215559.1| hypothetical protein CSV86_23639 [Pseudomonas putida CSV86]
gi|428760319|gb|EKX82586.1| hypothetical protein CSV86_23639 [Pseudomonas putida CSV86]
Length = 209
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V V PTD+ YA+ C + AI+R+RR++ ++ +
Sbjct: 4 FFQIHPENPQPRLIKQAVEIIRKGGVVVFPTDSSYAMGCQIGDKGAIDRVRRLRQLDKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + +FR +K +PGPYTFIL ++EVP+ +
Sbjct: 64 NFTLICCDLSQMGLFA--------KIDTGLFRLLKAHVPGPYTFILNGTREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+R+P I A+L+++ PL+S S+ D E M DP +
Sbjct: 113 -----HEKRRTIGLRVPRHPITLALLEELGEPLMSVSLILPGDEEVMTDPYEMRQRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P+++R G G +M E
Sbjct: 167 HVDLIIDGGYGDLKASTVINLADGEPEVVRVGCGDPTPFMVE 208
>gi|149907888|ref|ZP_01896556.1| Sua5/YciO/YrdC/YwlC family protein [Moritella sp. PE36]
gi|149808894|gb|EDM68825.1| Sua5/YciO/YrdC/YwlC family protein [Moritella sp. PE36]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +L++G V + PTD+ YA+ C L +A+ER+ +I+ ++
Sbjct: 4 FFYVHPDNPQARLISQAVAILRDGGVIIYPTDSGYALGCHLGDKNALERICKIRKLDKDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R + Q +RA+K+ PGP+TFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVENQA----YRALKNNTPGPFTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I AIL+ + P++STS+ + DP I D +
Sbjct: 114 ------PKRKTIGIRVPDNTIALAILEALGEPMMSTSLILPGNEGAEFDPEAIRDQLENQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ +++GG + +TVVD + I+RQG G
Sbjct: 168 -VELIINGGYLGEQVTTVVDYSEGDAVIVRQGAG 200
>gi|297569512|ref|YP_003690856.1| Sua5/YciO/YrdC/YwlC family protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296925427|gb|ADH86237.1| Sua5/YciO/YrdC/YwlC family protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 205
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 118/217 (54%), Gaps = 20/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ +P ++ VVE L++GAV PTDT+Y I CD+ + A++R+ ++K +
Sbjct: 1 MLLQINPDNPQPRLIKQVVEALRQGAVICYPTDTVYGIGCDIFNQKAVKRIYQLKQRPLA 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+P S +C L+D+ TY G +R ++ LPGPYTF+L A+K VPK +
Sbjct: 61 RPFSFICADLKDVSTYAHVSNTG--------YRVLRKSLPGPYTFVLPATKLVPKIMM-- 110
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLK-DNEWMVDPVVIADTYG 179
+ +K VG+R+P+ IC ++ + P+++TS D ++ + + YG
Sbjct: 111 -------TKQKTVGIRMPDHRICMELVTGLGNPILTTSAAPDDPDARQLIHAYEVEERYG 163
Query: 180 PEGLDFVVDGG-VRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++D G + + PSTVV + +++R GKG
Sbjct: 164 KQ-VDLIIDSGPLAHSSPSTVVSLEDDDLQVLRPGKG 199
>gi|255038761|ref|YP_003089382.1| Sua5/YciO/YrdC/YwlC family protein [Dyadobacter fermentans DSM
18053]
gi|254951517|gb|ACT96217.1| Sua5/YciO/YrdC/YwlC family protein [Dyadobacter fermentans DSM
18053]
Length = 208
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 123/224 (54%), Gaps = 24/224 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P D ++ VV+ L+ G + + PTDT+Y + CD+ + A+E++ RIK ++P K
Sbjct: 5 FIKIYPQNPDERRVRQVVDCLRNGGLVIYPTDTVYGLGCDIYNTRAVEKIARIKGIKPQK 64
Query: 62 -PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ + F R F+ +K LPGPYTFIL A+ VPK
Sbjct: 65 NDFSFICYDL----SHISDFARVGNTA----FKTMKRVLPGPYTFILEATSNVPKLL--- 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADT 177
+ +K VG+R+P++ I + I++++ P+++TS++ D+ E+ DP +I +
Sbjct: 114 ------NTNKKTVGIRVPDNLIPRLIVKELGNPIVTTSIR--DDDEIIEYSTDPELIFEK 165
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWM 221
+ + +D VVDGG ST+V G +IIR+G G ++
Sbjct: 166 FQHQ-VDMVVDGGYGGNVASTIVKADGDDFEIIREGLGDTAIFL 208
>gi|398879731|ref|ZP_10634818.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM67]
gi|398195695|gb|EJM82726.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM67]
Length = 222
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRNGGVVIYPTDSSYAIGCQIGDKNAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICCDLSQLGLF--------AKIDTGTFRVLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDTDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPTPFMAE 221
>gi|385852619|ref|YP_005899133.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis H44/76]
gi|416181881|ref|ZP_11611822.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M13399]
gi|416195343|ref|ZP_11617711.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis CU385]
gi|416212095|ref|ZP_11621700.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240013]
gi|427827276|ref|ZP_18994317.1| yrdC domain protein [Neisseria meningitidis H44/76]
gi|433464409|ref|ZP_20421901.1| telomere recombination family protein [Neisseria meningitidis
NM422]
gi|433487616|ref|ZP_20444793.1| telomere recombination family protein [Neisseria meningitidis
M13255]
gi|433489789|ref|ZP_20446926.1| telomere recombination family protein [Neisseria meningitidis
NM418]
gi|433504274|ref|ZP_20461218.1| telomere recombination family protein [Neisseria meningitidis 9506]
gi|433506571|ref|ZP_20463488.1| telomere recombination family protein [Neisseria meningitidis 9757]
gi|433508569|ref|ZP_20465452.1| telomere recombination family protein [Neisseria meningitidis
12888]
gi|433510687|ref|ZP_20467528.1| telomere recombination family protein [Neisseria meningitidis 4119]
gi|316984949|gb|EFV63905.1| yrdC domain protein [Neisseria meningitidis H44/76]
gi|325134902|gb|EGC57535.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis M13399]
gi|325140950|gb|EGC63457.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis CU385]
gi|325144974|gb|EGC67257.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240013]
gi|325199623|gb|ADY95078.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis H44/76]
gi|432205643|gb|ELK61668.1| telomere recombination family protein [Neisseria meningitidis
NM422]
gi|432225510|gb|ELK81252.1| telomere recombination family protein [Neisseria meningitidis
M13255]
gi|432229783|gb|ELK85464.1| telomere recombination family protein [Neisseria meningitidis
NM418]
gi|432243171|gb|ELK98685.1| telomere recombination family protein [Neisseria meningitidis 9506]
gi|432243895|gb|ELK99400.1| telomere recombination family protein [Neisseria meningitidis 9757]
gi|432249452|gb|ELL04859.1| telomere recombination family protein [Neisseria meningitidis
12888]
gi|432249901|gb|ELL05300.1| telomere recombination family protein [Neisseria meningitidis 4119]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|148981774|ref|ZP_01816522.1| putative translation factor [Vibrionales bacterium SWAT-3]
gi|417951065|ref|ZP_12594175.1| translation factor [Vibrio splendidus ATCC 33789]
gi|145960741|gb|EDK26080.1| putative translation factor [Vibrionales bacterium SWAT-3]
gi|342805413|gb|EGU40679.1| translation factor [Vibrio splendidus ATCC 33789]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++ ++L
Sbjct: 9 PDNPQARLINQAVAIVRNGGVVVYPTDSGYALGCQLENKQALERICKIRRIDDKHNFTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y R D FR +K PG YTFI A+KEVPK+ + AK
Sbjct: 69 CRDLSELSLYA----RVDNVA----FRLLKAHTPGAYTFIFKATKEVPKRLM-----NAK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L+ M PL+STS+ + DP I D+ +D +
Sbjct: 116 ---RKTIGIRVPDNKIALDLLEAMGEPLMSTSLILPGNETTESDPEEIRDSL-EHAVDVI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++GG +P+TV+D + I+R+G G
Sbjct: 172 LNGGYLGEQPTTVIDFSDDDAVILRRGAG 200
>gi|385854602|ref|YP_005901115.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240355]
gi|325203543|gb|ADY98996.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M01-240355]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRQGCG 199
>gi|134099760|ref|YP_001105421.1| SUA5/YciO/YrdC/YwlC family protein [Saccharopolyspora erythraea
NRRL 2338]
gi|291005649|ref|ZP_06563622.1| SUA5/YciO/YrdC/YwlC family protein [Saccharopolyspora erythraea
NRRL 2338]
gi|133912383|emb|CAM02496.1| SUA5/YciO/YrdC/YwlC family protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 35/223 (15%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y++ P + VV++L V V PTD+ +A+ C L + I+R+R I++++
Sbjct: 4 YIDVHPENPQRRAIGQVVDILDRDGVIVYPTDSCFALGCRLGNKEGIDRIRSIRDLDERH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVR 119
+++C++ + + H N +FRAVK PG YTFIL A++EVP++ +
Sbjct: 64 HFTLVCQNFAQLGQFV----------HINNAVFRAVKASTPGSYTFILPATREVPRRLM- 112
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
+ +K VG+RIP+ QA+L ++ PL+S+++ L D E DP+ T G
Sbjct: 113 -------HPKKKTVGIRIPDHVAAQALLSEVGEPLVSSTL-LLPDQE---DPL----TQG 157
Query: 180 PE-------GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
E +D VVD G EP+TV+D +G P+I+R+G G
Sbjct: 158 WEIKELLDHAVDAVVDSGDCGVEPTTVIDFSGDEPEIVRRGAG 200
>gi|62180287|ref|YP_216704.1| hypothetical protein SC1717 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375114615|ref|ZP_09759785.1| Uncharacterized protein yciO [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62127920|gb|AAX65623.1| putative translation factor [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322714761|gb|EFZ06332.1| Uncharacterized protein yciO [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|421538583|ref|ZP_15984758.1| hypothetical protein NMEN93003_1571 [Neisseria meningitidis 93003]
gi|402316253|gb|EJU51802.1| hypothetical protein NMEN93003_1571 [Neisseria meningitidis 93003]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|416159712|ref|ZP_11605976.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis N1568]
gi|416200928|ref|ZP_11619769.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
961-5945]
gi|421549991|ref|ZP_15995998.1| hypothetical protein NMEN69166_0397 [Neisseria meningitidis 69166]
gi|433470733|ref|ZP_20428130.1| telomere recombination family protein [Neisseria meningitidis
68094]
gi|433472816|ref|ZP_20430185.1| telomere recombination family protein [Neisseria meningitidis
97021]
gi|433477016|ref|ZP_20434342.1| telomere recombination family protein [Neisseria meningitidis
70012]
gi|433481251|ref|ZP_20438520.1| telomere recombination family protein [Neisseria meningitidis
2006087]
gi|433483332|ref|ZP_20440568.1| telomere recombination family protein [Neisseria meningitidis
2002038]
gi|433485465|ref|ZP_20442670.1| telomere recombination family protein [Neisseria meningitidis
97014]
gi|433525454|ref|ZP_20482095.1| telomere recombination family protein [Neisseria meningitidis
69096]
gi|433538190|ref|ZP_20494675.1| telomere recombination family protein [Neisseria meningitidis
70030]
gi|325128851|gb|EGC51710.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis N1568]
gi|325142951|gb|EGC65309.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
961-5945]
gi|402330905|gb|EJU66248.1| hypothetical protein NMEN69166_0397 [Neisseria meningitidis 69166]
gi|432211409|gb|ELK67362.1| telomere recombination family protein [Neisseria meningitidis
68094]
gi|432212255|gb|ELK68197.1| telomere recombination family protein [Neisseria meningitidis
97021]
gi|432216937|gb|ELK72809.1| telomere recombination family protein [Neisseria meningitidis
70012]
gi|432218549|gb|ELK74406.1| telomere recombination family protein [Neisseria meningitidis
2006087]
gi|432222702|gb|ELK78489.1| telomere recombination family protein [Neisseria meningitidis
2002038]
gi|432224377|gb|ELK80143.1| telomere recombination family protein [Neisseria meningitidis
97014]
gi|432263050|gb|ELL18279.1| telomere recombination family protein [Neisseria meningitidis
69096]
gi|432275515|gb|ELL30586.1| telomere recombination family protein [Neisseria meningitidis
70030]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVIDMTDGT--ELVRQGCG 199
>gi|221068835|ref|ZP_03544940.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni KF-1]
gi|220713858|gb|EED69226.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni KF-1]
Length = 214
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++ E+L++GA+ VPTD+ YA+VC L +A++R+RRI+ + L
Sbjct: 6 EVYPENPQPRIIKQAAEMLRKGAILAVPTDSSYALVCHLDDKNAVDRMRRIRQINDKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y R D + +R +K PGPYTFIL ASKEVPK+
Sbjct: 66 TLLCRDLSELANYA----RVDNRQ----YRLLKLATPGPYTFILEASKEVPKRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK +G+R+P+ Q +L+++ PL++T++ + E + D I + + P L
Sbjct: 112 --SHPSRKTIGLRVPDRKGLQLLLEELGEPLLATTLIAPGETEPLNDADSILERF-PHEL 168
Query: 184 DFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
D VVD G +P+TV+D+T P ++RQG G
Sbjct: 169 DAVVDSGACPQQPTTVLDLTPMALNNSPVVVRQGMG 204
>gi|389581383|ref|ZP_10171410.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacter postgatei 2ac9]
gi|389403018|gb|EIM65240.1| Sua5/YciO/YrdC/YwlC family protein [Desulfobacter postgatei 2ac9]
Length = 202
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 21/216 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M +P + + VE LK+G + PTDT Y I CD+ + AIE++ +IK + +
Sbjct: 1 MLYNVNPHTPQARIISMAVESLKKGGIIAYPTDTFYGIGCDIMNKKAIEKIYQIKQRDKT 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVR 119
KP S +C L++I Y +NI +R +K LPGPYTFILT SK VPK +
Sbjct: 61 KPFSFICPDLKNIAEYAKV---------SNIAYRHMKRLLPGPYTFILTGSKMVPKIML- 110
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
+ RK G+R+P + I + ++ P+ISTS D + + ++ D +
Sbjct: 111 --------TKRKTAGIRVPANQIAINLALELGNPIISTSATD-PDGQVFENASLLHDYFD 161
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG PS+V+ + P++IR G G
Sbjct: 162 AR-IDMVLDGGPVPNIPSSVISLVEDEPEVIRHGAG 196
>gi|226183750|dbj|BAH31854.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + +VE+L+ AV PTD+ YA+ + +HS +R+R I+++
Sbjct: 4 YFDVHPENPQPRAISQIVEMLRNDAVIAYPTDSCYALGARMDNHSGTDRIREIRHLRSDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + + FRAVK PG YTFIL A+KEVP++
Sbjct: 64 HFTLVCADFAQLGHFV--------HVTNSAFRAVKAATPGQYTFILPATKEVPRRLA--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K VGVRIP+ + +A+LQ++ P++S+++ E M D I + +
Sbjct: 113 -----HAKKKTVGVRIPSHPVVRALLQELGEPILSSTLLLPGAEEPMTDGWQIKEELDHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G EP+TVVD + P+I+R G G
Sbjct: 168 -LDAVIDSGDCGTEPTTVVDYSSGAPEIVRVGAG 200
>gi|398837769|ref|ZP_10595058.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM102]
gi|398861416|ref|ZP_10617045.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM79]
gi|398903604|ref|ZP_10651765.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM50]
gi|398118228|gb|EJM07967.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM102]
gi|398176845|gb|EJM64547.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM50]
gi|398233077|gb|EJN19021.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM79]
Length = 222
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQPRLIKQAVEIIRNGGVVIYPTDSSYAIGCQIGDKNAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRVLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEELGEPLMSVTLIMPGDTDPLSDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+ + P+IIR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVISLADGEPEIIRVGCGDPAPFMAE 221
>gi|381153501|ref|ZP_09865370.1| Sua5/YciO/YrdC/YwlC family protein [Methylomicrobium album BG8]
gi|380885473|gb|EIC31350.1| Sua5/YciO/YrdC/YwlC family protein [Methylomicrobium album BG8]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ E P + VE++++G V V PTD+ YA+ C + +A++++RRI+ ++
Sbjct: 4 FFEIHPETPQLRLIHRAVEIIRQGGVIVYPTDSSYALACQIGDKAALDKIRRIRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L + +T + + +R +K PGP+TFIL A++EVP++
Sbjct: 64 NFTLVCKDLAQVSNFT--------KIGNDAYRMIKALTPGPFTFILDATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ +K VG+RIP I ++ +++ PL +TS+ +E + DP I E
Sbjct: 112 ----QHPKKKTVGIRIPQHPIALTLVAELEEPLFTTSLLLPGMSEPLTDPFDIRKRLERE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+D G+ +T+++ + P+I+RQG G
Sbjct: 168 -IELVIDAGIIEYRETTIIEFSNNGPEIVRQGIG 200
>gi|323497600|ref|ZP_08102617.1| hypothetical protein VISI1226_22275 [Vibrio sinaloensis DSM 21326]
gi|323317349|gb|EGA70343.1| hypothetical protein VISI1226_22275 [Vibrio sinaloensis DSM 21326]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNEKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
S RK +G+R+P++ I +L+ + P++STS+ ++ DP I D
Sbjct: 114 ------SKRKTIGIRVPDNRIALDLLEALGEPMMSTSLILPGNDYTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSEDEPVIARVGAG 200
>gi|392555661|ref|ZP_10302798.1| RNA binding protein [Pseudoalteromonas undina NCIMB 2128]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++K+G V V PTD+ YAI C+L + A ER+ RI+ +E +++
Sbjct: 9 PDNPQPRLISQAVDIIKQGGVVVYPTDSGYAIGCNLGNKQAKERIERIRGIEKHHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY R D Q +FR +K+ PGPYTFI +KEVPK+ +
Sbjct: 69 CRDLSELSTYA----RVDNQ----MFRLIKNNTPGPYTFIFKGTKEVPKRLLN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+ I A+L ++ PL+S S+ D DP I D + +D +
Sbjct: 114 -DKKKTIGIRVIEHPIACALLAELGEPLMSCSLILPGDEYTQADPDDILDRLD-KHVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG + +TV+D++ +I+R G G
Sbjct: 172 IHGGYLTEQATTVIDLSEDDIQILRVGCG 200
>gi|418845191|ref|ZP_13399977.1| hypothetical protein SEEN443_20092 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392814000|gb|EJA69964.1| hypothetical protein SEEN443_20092 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQTVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|418529095|ref|ZP_13095035.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni ATCC
11996]
gi|371453521|gb|EHN66533.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni ATCC
11996]
Length = 214
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++ ++L++GA+ VPTD+ YA+VC L SA++R+RRI+ + L
Sbjct: 6 EVYPENPQPRIIKQAADMLRKGAILAVPTDSSYALVCHLDDKSAVDRMRRIRQINDKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y R D + +R +K PGPYTFIL ASKEVPK+
Sbjct: 66 TLLCRDLSELANYA----RVDNRQ----YRLLKLATPGPYTFILEASKEVPKRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK +G+R+P+ Q +L+++ PL++T++ + E + D I + + P L
Sbjct: 112 --SHPSRKTIGLRVPDRKGLQLLLEELGEPLLATTLIAPGETEPLNDAESILERF-PHEL 168
Query: 184 DFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
D VVD G +P+TV+D+T P ++RQG G
Sbjct: 169 DAVVDSGACPQQPTTVLDLTPMALNNSPVVVRQGMG 204
>gi|386320643|ref|YP_006016805.1| Sua5A [Riemerella anatipestifer RA-GD]
gi|325335186|gb|ADZ11460.1| Sua5A [Riemerella anatipestifer RA-GD]
Length = 466
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 24/205 (11%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDI 73
++ V++ L G + + P+DT+YA+ CD+ + A+E+L +K ++ K SI+C L +
Sbjct: 280 IKEVIKTLDNGGLIIYPSDTVYALGCDINNIKAMEKLAALKKIKLEKAHFSIICNDLSHL 339
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
++T ++FR +K +PG +TFIL A+K +P Y K V
Sbjct: 340 SSFTKPIDN-------SVFRLLKSHIPGAFTFILEANKNLP----------LAYKGHKTV 382
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEGLDFVVDGG 190
G+R+P+ I Q I++K+ P+ STS+K D+ E+ DP +IA+ Y +D V+D G
Sbjct: 383 GIRVPDHPIPQLIVEKLGRPIASTSIK--DDDEIIEYSTDPELIAEKYD-HLVDIVIDSG 439
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
ST+VD+T +IIRQGKG
Sbjct: 440 YGDNVASTIVDLTSGVAEIIRQGKG 464
>gi|16760160|ref|NP_455777.1| hypothetical protein STY1330 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765064|ref|NP_460679.1| hypothetical protein STM1720 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142069|ref|NP_805411.1| hypothetical protein t1633 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56413354|ref|YP_150429.1| hypothetical protein SPA1156 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613790|ref|YP_001587755.1| hypothetical protein SPAB_01524 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549771|ref|ZP_02343529.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168230159|ref|ZP_02655217.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237773|ref|ZP_02662831.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241299|ref|ZP_02666231.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260058|ref|ZP_02682031.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462805|ref|ZP_02696736.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168819543|ref|ZP_02831543.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194443555|ref|YP_002040974.1| hypothetical protein SNSL254_A1847 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451404|ref|YP_002045767.1| hypothetical protein SeHA_C1910 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470175|ref|ZP_03076159.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194734510|ref|YP_002114752.1| hypothetical protein SeSA_A1852 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250623|ref|YP_002146306.1| hypothetical protein SeAg_B1426 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262994|ref|ZP_03163068.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362278|ref|YP_002141915.1| hypothetical protein SSPA1075 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|200390159|ref|ZP_03216770.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204927841|ref|ZP_03219042.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|207856767|ref|YP_002243418.1| hypothetical protein SEN1313 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213023265|ref|ZP_03337712.1| hypothetical protein Salmonelentericaenterica_12025 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213163148|ref|ZP_03348858.1| hypothetical protein Salmoneentericaenterica_25228 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213421198|ref|ZP_03354264.1| hypothetical protein Salmonentericaenterica_27079 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213424437|ref|ZP_03357250.1| hypothetical protein SentesTyphi_01480 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582659|ref|ZP_03364485.1| hypothetical protein SentesTyph_16218 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213619078|ref|ZP_03372904.1| hypothetical protein SentesTyp_22475 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213649102|ref|ZP_03379155.1| hypothetical protein SentesTy_18553 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855224|ref|ZP_03383464.1| hypothetical protein SentesT_14592 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224583788|ref|YP_002637586.1| hypothetical protein SPC_2009 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911888|ref|ZP_04655725.1| hypothetical protein SentesTe_12251 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289829088|ref|ZP_06546768.1| hypothetical protein Salmonellentericaenterica_21274 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374980731|ref|ZP_09722061.1| YciO family [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375001138|ref|ZP_09725478.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375118901|ref|ZP_09764068.1| Uncharacterized protein yciO [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378445131|ref|YP_005232763.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378699600|ref|YP_005181557.1| hypothetical protein SL1344_1652 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378955233|ref|YP_005212720.1| hypothetical protein SPUL_1534 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959797|ref|YP_005217283.1| hypothetical protein STBHUCCB_17350 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378984285|ref|YP_005247440.1| hypothetical protein STMDT12_C17440 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989062|ref|YP_005252226.1| hypothetical protein STMUK_1692 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379700893|ref|YP_005242621.1| hypothetical protein STM474_1737 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496416|ref|YP_005397105.1| hypothetical protein UMN798_1812 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386591560|ref|YP_006087960.1| Protein that possibly bind dsRNA [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|409249953|ref|YP_006885766.1| putative ribosome maturation factor rimN [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416509680|ref|ZP_11736811.1| hypothetical protein SEEM031_09710 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416511939|ref|ZP_11737523.1| hypothetical protein SEEM710_03532 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416525586|ref|ZP_11741707.1| hypothetical protein SEEM010_17279 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416538435|ref|ZP_11749410.1| hypothetical protein SEEM030_21021 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416551396|ref|ZP_11756472.1| hypothetical protein SEEM29N_15360 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416559035|ref|ZP_11760481.1| hypothetical protein SEEM42N_09282 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416569575|ref|ZP_11765652.1| hypothetical protein SEEM41H_02182 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417326107|ref|ZP_12111875.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417341555|ref|ZP_12122574.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417348831|ref|ZP_12127671.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417357811|ref|ZP_12132848.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417363012|ref|ZP_12136516.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417373090|ref|ZP_12143202.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417383164|ref|ZP_12148923.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417390736|ref|ZP_12154126.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417459628|ref|ZP_12164141.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|417510461|ref|ZP_12175352.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|417518118|ref|ZP_12180541.1| YciO family [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
gi|417530511|ref|ZP_12185683.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|417539085|ref|ZP_12191467.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|418511187|ref|ZP_13077453.1| hypothetical protein SEEPO729_09765 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418764120|ref|ZP_13320223.1| hypothetical protein SEEN185_15867 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418767006|ref|ZP_13323075.1| hypothetical protein SEEN199_09632 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772832|ref|ZP_13328835.1| hypothetical protein SEEN539_01385 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418776957|ref|ZP_13332894.1| hypothetical protein SEEN953_18653 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780804|ref|ZP_13336693.1| hypothetical protein SEEN188_04692 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784006|ref|ZP_13339848.1| hypothetical protein SEEN559_11639 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418788185|ref|ZP_13343980.1| hypothetical protein SEEN447_03516 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418792458|ref|ZP_13348203.1| hypothetical protein SEEN449_04799 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797923|ref|ZP_13353603.1| hypothetical protein SEEN567_05413 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418801784|ref|ZP_13357417.1| hypothetical protein SEEN202_02619 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418809258|ref|ZP_13364810.1| hypothetical protein SEEN550_18982 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813413|ref|ZP_13368934.1| hypothetical protein SEEN513_07672 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817518|ref|ZP_13373005.1| hypothetical protein SEEN538_09296 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418821811|ref|ZP_13377226.1| hypothetical protein SEEN425_16992 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418827490|ref|ZP_13382631.1| hypothetical protein SEEN462_10904 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418830499|ref|ZP_13385461.1| hypothetical protein SEEN486_09935 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418837669|ref|ZP_13392541.1| hypothetical protein SEEN543_16746 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840361|ref|ZP_13395190.1| hypothetical protein SEEN554_17514 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418851187|ref|ZP_13405901.1| hypothetical protein SEEN978_04021 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418854215|ref|ZP_13408894.1| hypothetical protein SEEN593_08919 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418860458|ref|ZP_13415037.1| hypothetical protein SEEN470_20212 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863289|ref|ZP_13417827.1| hypothetical protein SEEN536_20380 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418866905|ref|ZP_13421366.1| hypothetical protein SEEN176_19864 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419730127|ref|ZP_14257078.1| hypothetical protein SEEH1579_08371 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732306|ref|ZP_14259212.1| hypothetical protein SEEH1563_19064 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740140|ref|ZP_14266874.1| hypothetical protein SEEH1573_21469 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419744664|ref|ZP_14271318.1| hypothetical protein SEEH1566_05973 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419748703|ref|ZP_14275195.1| hypothetical protein SEEH1565_20301 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|419787191|ref|ZP_14312904.1| hypothetical protein SEENLE01_00345 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419791890|ref|ZP_14317535.1| hypothetical protein SEENLE15_14193 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421358833|ref|ZP_15809130.1| hypothetical protein SEEE3139_12340 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421364326|ref|ZP_15814559.1| hypothetical protein SEEE0166_16985 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421368003|ref|ZP_15818196.1| hypothetical protein SEEE0631_12516 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421371460|ref|ZP_15821618.1| hypothetical protein SEEE0424_07165 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421376670|ref|ZP_15826769.1| hypothetical protein SEEE3076_10558 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421381171|ref|ZP_15831226.1| hypothetical protein SEEE4917_10328 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387843|ref|ZP_15837842.1| hypothetical protein SEEE6622_21228 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421390822|ref|ZP_15840797.1| hypothetical protein SEEE6670_13452 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394850|ref|ZP_15844789.1| hypothetical protein SEEE6426_11017 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400441|ref|ZP_15850327.1| hypothetical protein SEEE6437_16981 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403680|ref|ZP_15853524.1| hypothetical protein SEEE7246_10490 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421406583|ref|ZP_15856397.1| hypothetical protein SEEE7250_02349 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412918|ref|ZP_15862672.1| hypothetical protein SEEE1427_11521 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417066|ref|ZP_15866780.1| hypothetical protein SEEE2659_09744 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421905|ref|ZP_15871573.1| hypothetical protein SEEE1757_11394 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421426856|ref|ZP_15876484.1| hypothetical protein SEEE5101_13627 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421429399|ref|ZP_15878995.1| hypothetical protein SEEE8B1_03663 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421435435|ref|ZP_15884972.1| hypothetical protein SEEE5518_10771 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441143|ref|ZP_15890613.1| hypothetical protein SEEE1618_16789 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421445003|ref|ZP_15894433.1| hypothetical protein SEEE3079_13192 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421450299|ref|ZP_15899674.1| hypothetical protein SEEE6482_17396 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421572400|ref|ZP_16018050.1| hypothetical protein CFSAN00322_19396 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573928|ref|ZP_16019556.1| hypothetical protein CFSAN00325_03903 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421581681|ref|ZP_16027224.1| hypothetical protein CFSAN00326_19811 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421586889|ref|ZP_16032370.1| hypothetical protein CFSAN00328_22934 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|421885856|ref|ZP_16317039.1| hypothetical protein SS209_03004 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|422025898|ref|ZP_16372319.1| hypothetical protein B571_08656 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422030931|ref|ZP_16377117.1| hypothetical protein B572_08729 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427549889|ref|ZP_18927626.1| hypothetical protein B576_08739 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427565662|ref|ZP_18932348.1| hypothetical protein B577_08200 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427585681|ref|ZP_18937132.1| hypothetical protein B573_08156 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427608829|ref|ZP_18941996.1| hypothetical protein B574_08444 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427633147|ref|ZP_18946892.1| hypothetical protein B575_08750 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427655951|ref|ZP_18951658.1| hypothetical protein B578_08420 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661091|ref|ZP_18956566.1| hypothetical protein B579_09040 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427667917|ref|ZP_18961366.1| hypothetical protein B580_08742 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427763892|ref|ZP_18966514.1| hypothetical protein B581_10323 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436632131|ref|ZP_20515550.1| hypothetical protein SEE22704_19551 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436707839|ref|ZP_20518636.1| hypothetical protein SEE30663_10983 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436801565|ref|ZP_20525024.1| hypothetical protein SEECHS44_17233 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436808654|ref|ZP_20528034.1| hypothetical protein SEEE1882_09479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815588|ref|ZP_20533139.1| hypothetical protein SEEE1884_12398 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436845011|ref|ZP_20538769.1| hypothetical protein SEEE1594_18118 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851178|ref|ZP_20541777.1| hypothetical protein SEEE1566_10408 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436857942|ref|ZP_20546462.1| hypothetical protein SEEE1580_11505 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865118|ref|ZP_20551085.1| hypothetical protein SEEE1543_12305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870374|ref|ZP_20554145.1| hypothetical protein SEEE1441_05267 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882241|ref|ZP_20561261.1| hypothetical protein SEEE1810_18640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887972|ref|ZP_20564301.1| hypothetical protein SEEE1558_11179 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896240|ref|ZP_20568996.1| hypothetical protein SEEE1018_11967 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906217|ref|ZP_20575063.1| hypothetical protein SEEE1010_20126 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911835|ref|ZP_20577664.1| hypothetical protein SEEE1729_10655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921768|ref|ZP_20583993.1| hypothetical protein SEEE0895_19855 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436927492|ref|ZP_20587318.1| hypothetical protein SEEE0899_13664 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935787|ref|ZP_20591227.1| hypothetical protein SEEE1457_10696 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942977|ref|ZP_20595923.1| hypothetical protein SEEE1747_11862 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951532|ref|ZP_20600587.1| hypothetical protein SEEE0968_12549 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961139|ref|ZP_20604513.1| hypothetical protein SEEE1444_09530 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971265|ref|ZP_20609658.1| hypothetical protein SEEE1445_12741 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436983133|ref|ZP_20613722.1| hypothetical protein SEEE1559_10732 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991699|ref|ZP_20617710.1| hypothetical protein SEEE1565_08045 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437006715|ref|ZP_20622766.1| hypothetical protein SEEE1808_11038 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437024379|ref|ZP_20629588.1| hypothetical protein SEEE1811_22734 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029767|ref|ZP_20630949.1| hypothetical protein SEEE0956_06651 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437041080|ref|ZP_20635147.1| hypothetical protein SEEE1455_05019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053196|ref|ZP_20642394.1| hypothetical protein SEEE1575_19144 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058308|ref|ZP_20645155.1| hypothetical protein SEEE1725_10489 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437070870|ref|ZP_20652048.1| hypothetical protein SEEE1745_22568 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075998|ref|ZP_20654361.1| hypothetical protein SEEE1791_11382 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085495|ref|ZP_20660099.1| hypothetical protein SEEE1795_17809 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437087972|ref|ZP_20661365.1| hypothetical protein SEEE6709_01554 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437099910|ref|ZP_20665852.1| hypothetical protein SEEE9058_01282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118684|ref|ZP_20670486.1| hypothetical protein SEEE0816_02005 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437130603|ref|ZP_20676733.1| hypothetical protein SEEE0819_10820 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437140710|ref|ZP_20682709.1| hypothetical protein SEEE3072_18303 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148100|ref|ZP_20687291.1| hypothetical protein SEEE3089_18593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437150576|ref|ZP_20688773.1| hypothetical protein SEEE9163_03139 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437162242|ref|ZP_20695901.1| hypothetical protein SEEE151_16536 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437167181|ref|ZP_20698499.1| hypothetical protein SEEEN202_06942 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179895|ref|ZP_20705663.1| hypothetical protein SEEE3991_20644 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437181101|ref|ZP_20706321.1| hypothetical protein SEEE3618_01259 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437261363|ref|ZP_20718433.1| hypothetical protein SEEE2490_13639 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437267761|ref|ZP_20721394.1| hypothetical protein SEEEL909_06026 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437275875|ref|ZP_20726101.1| hypothetical protein SEEEL913_06965 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437296371|ref|ZP_20732460.1| hypothetical protein SEEE4941_16630 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437308222|ref|ZP_20735263.1| hypothetical protein SEEE7015_08082 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437331206|ref|ZP_20741938.1| hypothetical protein SEEE7927_19116 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437347404|ref|ZP_20747164.1| hypothetical protein SEEECHS4_22833 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437420929|ref|ZP_20754703.1| hypothetical protein SEEE2217_15547 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437438866|ref|ZP_20757031.1| hypothetical protein SEEE4018_04321 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437465820|ref|ZP_20764317.1| hypothetical protein SEEE6211_18412 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437478318|ref|ZP_20767331.1| hypothetical protein SEEE4441_10819 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437496440|ref|ZP_20773238.1| hypothetical protein SEEE4647_18174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437539415|ref|ZP_20782183.1| hypothetical protein SEEE9317_18104 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437553435|ref|ZP_20784019.1| hypothetical protein SEEE0116_04265 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437578806|ref|ZP_20791496.1| hypothetical protein SEEE1117_19235 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437606547|ref|ZP_20799945.1| hypothetical protein SEEE0268_16529 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437620646|ref|ZP_20804229.1| hypothetical protein SEEE0316_15390 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437645041|ref|ZP_20808785.1| hypothetical protein SEEE0436_15694 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437656800|ref|ZP_20810941.1| hypothetical protein SEEE1319_02732 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437676232|ref|ZP_20816918.1| hypothetical protein SEEE4481_10472 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437697635|ref|ZP_20823010.1| hypothetical protein SEEE6297_18029 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437713963|ref|ZP_20827570.1| hypothetical protein SEEE4220_18479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437778365|ref|ZP_20836290.1| hypothetical protein SEEE2651_16819 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437809371|ref|ZP_20840655.1| hypothetical protein SEEE3944_14174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437821926|ref|ZP_20843419.1| hypothetical protein SEEERB17_013044 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|437858679|ref|ZP_20847797.1| hypothetical protein SEEE5621_04147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438039617|ref|ZP_20855664.1| hypothetical protein SEEE5646_17410 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438083355|ref|ZP_20858179.1| hypothetical protein SEEE2625_03067 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438097734|ref|ZP_20862558.1| hypothetical protein SEEE1976_02350 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438112249|ref|ZP_20868846.1| hypothetical protein SEEE3407_11523 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438129943|ref|ZP_20873417.1| hypothetical protein SEEP9120_08024 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440762914|ref|ZP_20941963.1| hypothetical protein F434_08126 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768077|ref|ZP_20947051.1| hypothetical protein F514_10515 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774527|ref|ZP_20953414.1| hypothetical protein F515_19063 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445143879|ref|ZP_21386715.1| hypothetical protein SEEDSL_018515 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445155547|ref|ZP_21392357.1| hypothetical protein SEEDHWS_008915 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445173991|ref|ZP_21396854.1| hypothetical protein SEE8A_006897 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445195744|ref|ZP_21400503.1| hypothetical protein SE20037_12960 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445229907|ref|ZP_21405247.1| hypothetical protein SEE10_007607 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445330144|ref|ZP_21413763.1| hypothetical protein SEE18569_013157 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445347073|ref|ZP_21419044.1| hypothetical protein SEE13_001484 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445364683|ref|ZP_21425013.1| hypothetical protein SEE23_018782 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|452120089|ref|YP_007470337.1| hypothetical protein CFSAN001992_02875 [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|25319041|pir||AH0653 conserved hypothetical protein STY1330 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16420250|gb|AAL20638.1| putative translation factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502454|emb|CAD08411.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137698|gb|AAO69260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127611|gb|AAV77117.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161363154|gb|ABX66922.1| hypothetical protein SPAB_01524 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402218|gb|ACF62440.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194409708|gb|ACF69927.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456539|gb|EDX45378.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194710012|gb|ACF89233.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195634421|gb|EDX52773.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093755|emb|CAR59229.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214326|gb|ACH51723.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241249|gb|EDY23869.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289249|gb|EDY28616.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199602604|gb|EDZ01150.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204323183|gb|EDZ08379.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205325048|gb|EDZ12887.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205335546|gb|EDZ22310.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339648|gb|EDZ26412.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343598|gb|EDZ30362.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350954|gb|EDZ37585.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708570|emb|CAR32891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224468315|gb|ACN46145.1| hypothetical protein SPC_2009 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261246910|emb|CBG24727.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301158248|emb|CBW17747.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912713|dbj|BAJ36687.1| hypothetical protein STMDT12_C17440 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320085781|emb|CBY95557.1| putative ribosome maturation factor rimN [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224351|gb|EFX49414.1| YciO family [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323129992|gb|ADX17422.1| Uncharacterized protein yciO [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326623168|gb|EGE29513.1| Uncharacterized protein yciO [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|332988609|gb|AEF07592.1| hypothetical protein STMUK_1692 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353075826|gb|EHB41586.1| Sua5/YciO/YrdC/YwlC family protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353574039|gb|EHC37206.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353574530|gb|EHC37538.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353592865|gb|EHC50765.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353600815|gb|EHC56592.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353603444|gb|EHC58541.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353612668|gb|EHC64987.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353617769|gb|EHC68648.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353632693|gb|EHC79700.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353646198|gb|EHC89685.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353649878|gb|EHC92393.1| YciO family [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
gi|353665174|gb|EHD03391.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353666175|gb|EHD04075.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|357205844|gb|AET53890.1| hypothetical protein SPUL_1534 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357957738|gb|EHJ82665.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|363550667|gb|EHL34994.1| hypothetical protein SEEM031_09710 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363558619|gb|EHL42808.1| hypothetical protein SEEM010_17279 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363561960|gb|EHL46073.1| hypothetical protein SEEM030_21021 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363566646|gb|EHL50660.1| hypothetical protein SEEM29N_15360 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363570343|gb|EHL54279.1| hypothetical protein SEEM710_03532 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363576242|gb|EHL60079.1| hypothetical protein SEEM42N_09282 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363576652|gb|EHL60483.1| hypothetical protein SEEM41H_02182 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366084862|gb|EHN48756.1| hypothetical protein SEEPO729_09765 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|374353669|gb|AEZ45430.1| hypothetical protein STBHUCCB_17350 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379984495|emb|CCF89312.1| hypothetical protein SS209_03004 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|380463237|gb|AFD58640.1| hypothetical protein UMN798_1812 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381294925|gb|EIC36050.1| hypothetical protein SEEH1579_08371 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381296187|gb|EIC37294.1| hypothetical protein SEEH1573_21469 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381303155|gb|EIC44184.1| hypothetical protein SEEH1563_19064 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381308357|gb|EIC49201.1| hypothetical protein SEEH1566_05973 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381313287|gb|EIC54074.1| hypothetical protein SEEH1565_20301 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798604|gb|AFH45686.1| Protein that possibly bind dsRNA [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392619857|gb|EIX02235.1| hypothetical protein SEENLE15_14193 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392620031|gb|EIX02401.1| hypothetical protein SEENLE01_00345 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730468|gb|EIZ87709.1| hypothetical protein SEEN185_15867 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392731959|gb|EIZ89182.1| hypothetical protein SEEN539_01385 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392735642|gb|EIZ92813.1| hypothetical protein SEEN199_09632 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392745296|gb|EJA02331.1| hypothetical protein SEEN953_18653 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392749854|gb|EJA06831.1| hypothetical protein SEEN188_04692 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392755835|gb|EJA12737.1| hypothetical protein SEEN559_11639 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392763093|gb|EJA19901.1| hypothetical protein SEEN447_03516 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392767492|gb|EJA24256.1| hypothetical protein SEEN567_05413 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392768252|gb|EJA25009.1| hypothetical protein SEEN449_04799 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392773343|gb|EJA30039.1| hypothetical protein SEEN550_18982 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774639|gb|EJA31334.1| hypothetical protein SEEN513_07672 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392779988|gb|EJA36651.1| hypothetical protein SEEN202_02619 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392788507|gb|EJA45036.1| hypothetical protein SEEN538_09296 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392788578|gb|EJA45106.1| hypothetical protein SEEN425_16992 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392798404|gb|EJA54681.1| hypothetical protein SEEN543_16746 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392799108|gb|EJA55373.1| hypothetical protein SEEN462_10904 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392801837|gb|EJA58059.1| hypothetical protein SEEN486_09935 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392810851|gb|EJA66863.1| hypothetical protein SEEN554_17514 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392818120|gb|EJA74016.1| hypothetical protein SEEN978_04021 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392825008|gb|EJA80766.1| hypothetical protein SEEN593_08919 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392827186|gb|EJA82904.1| hypothetical protein SEEN470_20212 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833157|gb|EJA88772.1| hypothetical protein SEEN536_20380 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840017|gb|EJA95555.1| hypothetical protein SEEN176_19864 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|395984482|gb|EJH93669.1| hypothetical protein SEEE0166_16985 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395986523|gb|EJH95687.1| hypothetical protein SEEE0631_12516 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987273|gb|EJH96436.1| hypothetical protein SEEE3139_12340 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|396000292|gb|EJI09306.1| hypothetical protein SEEE3076_10558 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396001134|gb|EJI10146.1| hypothetical protein SEEE4917_10328 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396002756|gb|EJI11745.1| hypothetical protein SEEE0424_07165 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396008668|gb|EJI17602.1| hypothetical protein SEEE6622_21228 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396013587|gb|EJI22474.1| hypothetical protein SEEE6426_11017 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396014632|gb|EJI23518.1| hypothetical protein SEEE6670_13452 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396023274|gb|EJI32073.1| hypothetical protein SEEE6437_16981 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396026760|gb|EJI35524.1| hypothetical protein SEEE7246_10490 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396033755|gb|EJI42461.1| hypothetical protein SEEE7250_02349 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396040006|gb|EJI48630.1| hypothetical protein SEEE1427_11521 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396041220|gb|EJI49843.1| hypothetical protein SEEE1757_11394 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043262|gb|EJI51867.1| hypothetical protein SEEE2659_09744 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396054363|gb|EJI62856.1| hypothetical protein SEEE5101_13627 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396056704|gb|EJI65178.1| hypothetical protein SEEE5518_10771 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396058280|gb|EJI66743.1| hypothetical protein SEEE8B1_03663 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396064746|gb|EJI73129.1| hypothetical protein SEEE1618_16789 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396066547|gb|EJI74908.1| hypothetical protein SEEE6482_17396 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396067434|gb|EJI75794.1| hypothetical protein SEEE3079_13192 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|402517308|gb|EJW24712.1| hypothetical protein CFSAN00326_19811 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402517515|gb|EJW24915.1| hypothetical protein CFSAN00322_19396 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402526171|gb|EJW33448.1| hypothetical protein CFSAN00325_03903 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402528288|gb|EJW35546.1| hypothetical protein CFSAN00328_22934 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414019063|gb|EKT02689.1| hypothetical protein B571_08656 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414019652|gb|EKT03254.1| hypothetical protein B576_08739 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414021530|gb|EKT05071.1| hypothetical protein B572_08729 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414033293|gb|EKT16252.1| hypothetical protein B577_08200 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035096|gb|EKT17995.1| hypothetical protein B573_08156 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414038117|gb|EKT20842.1| hypothetical protein B574_08444 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414047961|gb|EKT30221.1| hypothetical protein B578_08420 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414049533|gb|EKT31739.1| hypothetical protein B575_08750 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414053925|gb|EKT35892.1| hypothetical protein B579_09040 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059982|gb|EKT41515.1| hypothetical protein B580_08742 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414065484|gb|EKT46217.1| hypothetical protein B581_10323 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434941741|gb|ELL48135.1| hypothetical protein SEEP9120_08024 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434957983|gb|ELL51570.1| hypothetical protein SEECHS44_17233 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434960301|gb|ELL53697.1| hypothetical protein SEE22704_19551 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434966471|gb|ELL59306.1| hypothetical protein SEEE1882_09479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434973704|gb|ELL66092.1| hypothetical protein SEEE1884_12398 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434979597|gb|ELL71589.1| hypothetical protein SEEE1594_18118 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434986480|gb|ELL78131.1| hypothetical protein SEEE1566_10408 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990094|gb|ELL81644.1| hypothetical protein SEEE1580_11505 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434992223|gb|ELL83692.1| hypothetical protein SEE30663_10983 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434996153|gb|ELL87469.1| hypothetical protein SEEE1543_12305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002115|gb|ELL93196.1| hypothetical protein SEEE1441_05267 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435003813|gb|ELL94819.1| hypothetical protein SEEE1810_18640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009682|gb|ELM00468.1| hypothetical protein SEEE1558_11179 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014794|gb|ELM05351.1| hypothetical protein SEEE1010_20126 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016129|gb|ELM06655.1| hypothetical protein SEEE1018_11967 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435024086|gb|ELM14292.1| hypothetical protein SEEE0895_19855 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435026080|gb|ELM16211.1| hypothetical protein SEEE1729_10655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435037333|gb|ELM27152.1| hypothetical protein SEEE0899_13664 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038625|gb|ELM28406.1| hypothetical protein SEEE1457_10696 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435043176|gb|ELM32893.1| hypothetical protein SEEE1747_11862 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050278|gb|ELM39782.1| hypothetical protein SEEE1444_09530 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435051999|gb|ELM41501.1| hypothetical protein SEEE0968_12549 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057554|gb|ELM46923.1| hypothetical protein SEEE1445_12741 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435065571|gb|ELM54676.1| hypothetical protein SEEE1559_10732 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435068276|gb|ELM57305.1| hypothetical protein SEEE1565_08045 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435069631|gb|ELM58630.1| hypothetical protein SEEE1808_11038 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074186|gb|ELM63041.1| hypothetical protein SEEE1811_22734 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435082801|gb|ELM71412.1| hypothetical protein SEEE0956_06651 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435086975|gb|ELM75503.1| hypothetical protein SEEE1455_05019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435089579|gb|ELM78004.1| hypothetical protein SEEE1575_19144 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435090841|gb|ELM79243.1| hypothetical protein SEEE1745_22568 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435094121|gb|ELM82460.1| hypothetical protein SEEE1725_10489 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435104769|gb|ELM92808.1| hypothetical protein SEEE1795_17809 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105295|gb|ELM93332.1| hypothetical protein SEEE1791_11382 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435117343|gb|ELN05054.1| hypothetical protein SEEE6709_01554 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435124577|gb|ELN12033.1| hypothetical protein SEEE0819_10820 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435125449|gb|ELN12891.1| hypothetical protein SEEE9058_01282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435130225|gb|ELN17483.1| hypothetical protein SEEE3072_18303 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435131854|gb|ELN19059.1| hypothetical protein SEEE0816_02005 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435133556|gb|ELN20723.1| hypothetical protein SEEE3089_18593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435143197|gb|ELN30065.1| hypothetical protein SEEE151_16536 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435145820|gb|ELN32629.1| hypothetical protein SEEE9163_03139 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435149662|gb|ELN36356.1| hypothetical protein SEEE3991_20644 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435151803|gb|ELN38442.1| hypothetical protein SEEEN202_06942 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435163819|gb|ELN49955.1| hypothetical protein SEEE2490_13639 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435166836|gb|ELN52795.1| hypothetical protein SEEE3618_01259 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435174074|gb|ELN59531.1| hypothetical protein SEEEL913_06965 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435175249|gb|ELN60667.1| hypothetical protein SEEEL909_06026 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435179762|gb|ELN64903.1| hypothetical protein SEEE4941_16630 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435185817|gb|ELN70673.1| hypothetical protein SEEE7015_08082 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435188618|gb|ELN73308.1| hypothetical protein SEEECHS4_22833 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435188979|gb|ELN73631.1| hypothetical protein SEEE7927_19116 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435201009|gb|ELN84960.1| hypothetical protein SEEE2217_15547 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435212862|gb|ELN95813.1| hypothetical protein SEEE4018_04321 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435216244|gb|ELN98720.1| hypothetical protein SEEE6211_18412 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435221137|gb|ELO03410.1| hypothetical protein SEEE4441_10819 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435226121|gb|ELO07714.1| hypothetical protein SEEE4647_18174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435237989|gb|ELO18643.1| hypothetical protein SEEE9317_18104 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435241780|gb|ELO22111.1| hypothetical protein SEEE1117_19235 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435244639|gb|ELO24816.1| hypothetical protein SEEE0116_04265 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435254533|gb|ELO33918.1| hypothetical protein SEEE0268_16529 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435257442|gb|ELO36733.1| hypothetical protein SEEE0316_15390 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435271714|gb|ELO50158.1| hypothetical protein SEEE1319_02732 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435272915|gb|ELO51289.1| hypothetical protein SEEE0436_15694 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435275923|gb|ELO53965.1| hypothetical protein SEEE6297_18029 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435276927|gb|ELO54915.1| hypothetical protein SEEE4481_10472 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435286330|gb|ELO63613.1| hypothetical protein SEEE4220_18479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435299281|gb|ELO75439.1| hypothetical protein SEEE3944_14174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435303342|gb|ELO79240.1| hypothetical protein SEEE2651_16819 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435306735|gb|ELO81984.1| hypothetical protein SEEERB17_013044 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435320057|gb|ELO92781.1| hypothetical protein SEEE2625_03067 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322956|gb|ELO95131.1| hypothetical protein SEEE5646_17410 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435326891|gb|ELO98673.1| hypothetical protein SEEE1976_02350 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435330327|gb|ELP01593.1| hypothetical protein SEEE3407_11523 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435336909|gb|ELP06648.1| hypothetical protein SEEE5621_04147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|436412750|gb|ELP10688.1| hypothetical protein F515_19063 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436418582|gb|ELP16465.1| hypothetical protein F514_10515 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436421664|gb|ELP19508.1| hypothetical protein F434_08126 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|444847565|gb|ELX72711.1| hypothetical protein SEEDSL_018515 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444848854|gb|ELX73974.1| hypothetical protein SEEDHWS_008915 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444859422|gb|ELX84368.1| hypothetical protein SEE8A_006897 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444864830|gb|ELX89617.1| hypothetical protein SEE10_007607 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444865247|gb|ELX90023.1| hypothetical protein SE20037_12960 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444877362|gb|ELY01510.1| hypothetical protein SEE13_001484 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444878296|gb|ELY02418.1| hypothetical protein SEE18569_013157 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444883175|gb|ELY07077.1| hypothetical protein SEE23_018782 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|451909093|gb|AGF80899.1| hypothetical protein CFSAN001992_02875 [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|304413778|ref|ZP_07395222.1| dsRNA-binding putative translation factor [Candidatus Regiella
insecticola LSR1]
gi|304283869|gb|EFL92263.1| dsRNA-binding putative translation factor [Candidatus Regiella
insecticola LSR1]
Length = 196
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 21/212 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
++ P ++ V++L +G V + PTD+ YA+ C L+ A++R+ RI+ +
Sbjct: 4 FLHIHPQDPQLRLIKLSVDVLSKGGVIIYPTDSGYALGCRLEEKIAMDRICRIRQHNTTN 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHAN--IFRAVKHCLPGPYTFILTASKEVPKKCVR 119
+++CR L ++ TY H + F+ +K+ +PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCRDLSELSTY----------AHVDNYAFKLIKNNIPGSYTFILRATKEVPRRLMN 113
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYG 179
RK +G+R+ + I A++ + PL+ST++ ++ DP VI
Sbjct: 114 --------DKRKTIGLRVLTNPIALALMALLKEPLMSTTLILQGNDRAESDPEVIKKNLS 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIR 211
+ +D ++ GG+ A+PSTV+DMT + P IIR
Sbjct: 166 KQ-VDLIIHGGILEAQPSTVIDMTTSAPVIIR 196
>gi|313207355|ref|YP_004046532.1| translation factor sua5 [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383484722|ref|YP_005393634.1| translation factor sua5 [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|407452938|ref|YP_006724663.1| translation factor (SUA5) [Riemerella anatipestifer RA-CH-1]
gi|416110327|ref|ZP_11591942.1| Sua5 YciO YrdC YwlC family protein [Riemerella anatipestifer RA-YM]
gi|442315377|ref|YP_007356680.1| Putative translation factor (SUA5) [Riemerella anatipestifer
RA-CH-2]
gi|312446671|gb|ADQ83026.1| translation factor SUA5 [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315023250|gb|EFT36260.1| Sua5 YciO YrdC YwlC family protein [Riemerella anatipestifer RA-YM]
gi|380459407|gb|AFD55091.1| translation factor sua5 [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|403313922|gb|AFR36763.1| Putative translation factor (SUA5) [Riemerella anatipestifer
RA-CH-1]
gi|441484300|gb|AGC40986.1| Putative translation factor (SUA5) [Riemerella anatipestifer
RA-CH-2]
Length = 203
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 24/205 (11%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP-LSILCRSLRDI 73
++ V++ L G + + P+DT+YA+ CD+ + A+E+L +K ++ K SI+C L +
Sbjct: 17 IKEVIKTLDNGGLIIYPSDTVYALGCDINNIKAMEKLAALKKIKLEKAHFSIICNDLSHL 76
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
++T ++FR +K +PG +TFIL A+K +P Y K V
Sbjct: 77 SSFTKPIDN-------SVFRLLKSHIPGAFTFILEANKNLP----------LAYKGHKTV 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDN---EWMVDPVVIADTYGPEGLDFVVDGG 190
G+R+P+ I Q I++K+ P+ STS+K D+ E+ DP +IA+ Y +D V+D G
Sbjct: 120 GIRVPDHPIPQLIVEKLGRPIASTSIK--DDDEIIEYSTDPELIAEKYD-HLVDIVIDSG 176
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
ST+VD+T +IIRQGKG
Sbjct: 177 YGDNVASTIVDLTSGVAEIIRQGKG 201
>gi|421562642|ref|ZP_16008468.1| hypothetical protein NMEN2795_0459 [Neisseria meningitidis NM2795]
gi|421907386|ref|ZP_16337264.1| putative ribosome maturation factor rimN [Neisseria meningitidis
alpha704]
gi|393291503|emb|CCI73255.1| putative ribosome maturation factor rimN [Neisseria meningitidis
alpha704]
gi|402342786|gb|EJU77944.1| hypothetical protein NMEN2795_0459 [Neisseria meningitidis NM2795]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDM GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMADGT--ELVRQGCG 199
>gi|381404390|ref|ZP_09929074.1| hypothetical protein S7A_09075 [Pantoea sp. Sc1]
gi|380737589|gb|EIB98652.1| hypothetical protein S7A_09075 [Pantoea sp. Sc1]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 119/209 (56%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+ L +G+V V PTD+ YA+ C L+ A+ER+ RI+ ++ +++
Sbjct: 9 PDNPQPRLINQAVDYLNKGSVIVYPTDSGYALGCRLEEKGAMERICRIRQLDGHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y+ Q + FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 69 CRDLSELSVYS--------QVGNSAFRLLKNNTPGNYTFILKATKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ + A+L+ ++ P++STS+ ++ DP I T G + +D +
Sbjct: 114 -EKRKTIGLRVPSNPVALALLEALNQPMMSTSLILPGNDFTESDPEEIQHTIG-KLVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG +P+TVVD+T P+I+R+G G
Sbjct: 172 IDGGTLGQQPTTVVDLTTDTPEIVREGVG 200
>gi|385340636|ref|YP_005894508.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis G2136]
gi|433468637|ref|ZP_20426072.1| telomere recombination family protein [Neisseria meningitidis
98080]
gi|325198880|gb|ADY94336.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis G2136]
gi|432205856|gb|ELK61872.1| telomere recombination family protein [Neisseria meningitidis
98080]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+KEVP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKEVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|94266543|ref|ZP_01290229.1| Sua5/YciO/YrdC/YwlC [delta proteobacterium MLMS-1]
gi|93452818|gb|EAT03344.1| Sua5/YciO/YrdC/YwlC [delta proteobacterium MLMS-1]
Length = 204
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+E +P ++ VVE L++GAV PTDT+Y I CD+ + A++R+ ++K +P
Sbjct: 1 MEINPDNPQPRLIKRVVEALRQGAVICYPTDTVYGIGCDIFNQKAVKRIYQLKCRPLGQP 60
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
S +C L++I Y G +R ++ LPGPYTF+L A+K VPK
Sbjct: 61 FSFICADLKEISNYAHVSNTG--------YRVMRKSLPGPYTFVLPATKLVPK------- 105
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
S +K VG+R+P++ IC ++ + P+++TS + + + + YG
Sbjct: 106 --IMMSKQKTVGIRVPDNRICLELVAGLGNPILTTSAAPDDPDSRQLLAFEVDERYG-HL 162
Query: 183 LDFVVDGG-VRVAEPSTVVDMTGTYPKIIRQGKG 215
+D+ +D G + VA+PSTVV M ++R GKG
Sbjct: 163 VDYTIDSGPLTVAQPSTVVSMVDDELTVLRPGKG 196
>gi|91228667|ref|ZP_01262582.1| putative translation factor [Vibrio alginolyticus 12G01]
gi|254230518|ref|ZP_04923890.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio sp. Ex25]
gi|262393862|ref|YP_003285716.1| hypothetical protein VEA_003091 [Vibrio sp. Ex25]
gi|269967048|ref|ZP_06181116.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|451972643|ref|ZP_21925848.1| putative translation factor [Vibrio alginolyticus E0666]
gi|91187788|gb|EAS74105.1| putative translation factor [Vibrio alginolyticus 12G01]
gi|151936966|gb|EDN55852.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio sp. Ex25]
gi|262337456|gb|ACY51251.1| YrdC family protein [Vibrio sp. Ex25]
gi|269828307|gb|EEZ82573.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|451931459|gb|EMD79148.1| putative translation factor [Vibrio alginolyticus E0666]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNSA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + P++STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNQIALDLLEALGEPMMSTSLILPGSDVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + P ++R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVIDFSEGEPVVVRLGSG 200
>gi|387773698|ref|ZP_10128988.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parahaemolyticus
HK385]
gi|386904439|gb|EIJ69233.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus parahaemolyticus
HK385]
Length = 205
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 18/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V + PTD+ YA+ C + SA+ER+ RI+ + + +++
Sbjct: 9 PENPQPRLINQAVEIIRKGGVIIYPTDSGYALGCGIGEKSAMERIVRIRQLPENHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY D Q +R +K+ +P PYTFIL A+K+VP++
Sbjct: 69 CSDLSELSTYAM----VDNQA----YRLMKNNVPNPYTFILPATKDVPRRL--------- 111
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P++AI A++ + PL+S S+ ++ DP I T +D +
Sbjct: 112 QTKRKTIGIRVPDNAIALALIAALGEPLLSCSLMLPSEDMTQSDPEEIR-TLLEHQVDLI 170
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG EP+TVVD+TG P+IIR+G G
Sbjct: 171 IHGGYLGVEPTTVVDLTGDSPEIIREGSG 199
>gi|602960|gb|AAB59987.1| ORF1, partial [Escherichia coli str. K-12 substr. W3110]
Length = 183
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 111/195 (56%), Gaps = 19/195 (9%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
+++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++CR L ++ TY+
Sbjct: 1 VRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF--- 57
Query: 82 RGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++
Sbjct: 58 ------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVPSN 103
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I QA+L+ + P++STS+ DP I D + +D ++ GG +P+TV+
Sbjct: 104 PIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQ-VDLIIHGGYLGQKPTTVI 162
Query: 201 DMTGTYPKIIRQGKG 215
D+T P ++R+G G
Sbjct: 163 DLTDDTPVVVREGVG 177
>gi|407791245|ref|ZP_11138331.1| Sua5/YciO/YrdC/YwlC family protein [Gallaecimonas xiamenensis
3-C-1]
gi|407200938|gb|EKE70941.1| Sua5/YciO/YrdC/YwlC family protein [Gallaecimonas xiamenensis
3-C-1]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V + PTD+ YA+ C A+ER+ RI+ ++
Sbjct: 4 FFYVHPENPQARLISQAVAIIRSGGVIIYPTDSGYALGCHQGDKGALERIIRIRKLQDDH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C+ L ++ Y R D Q FR +++ PGPYTFIL +KEVPK+ +
Sbjct: 64 NFTLVCKDLSELSLYA----RVDNQA----FRLIRNNTPGPYTFILKGTKEVPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I A+L + PL+STS+ ++ DP YG E
Sbjct: 114 ------PKRKTIGLRVPDNVIALALLDALGEPLMSTSLILPGNDFTEADPEEF--RYGLE 165
Query: 182 G-LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GGV +P++V+DM+ +++R G G
Sbjct: 166 NQVDLIINGGVLGEKPTSVIDMSEEAVEVLRVGSG 200
>gi|399009508|ref|ZP_10711939.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM17]
gi|398111926|gb|EJM01799.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM17]
Length = 222
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD+ YAI C + SA+ER+RR++ ++
Sbjct: 17 FFQIHPENPQPRLIKQAVEIIRSGGVVIYPTDSSYAIGCQIGDKSAVERVRRLRQLDDKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S S+ + E M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVSLIMPGETEPMNDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIMASTVINLADGEPEVIRIGCGDPAPFMVE 221
>gi|302850327|ref|XP_002956691.1| hypothetical protein VOLCADRAFT_107339 [Volvox carteri f.
nagariensis]
gi|300258052|gb|EFJ42293.1| hypothetical protein VOLCADRAFT_107339 [Volvox carteri f.
nagariensis]
Length = 233
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 113/218 (51%), Gaps = 45/218 (20%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+ + +P G+D+W+LE +V+LLK GAVGV+PTDTL AIVCDL + A++RL +K ++
Sbjct: 52 LILTVEPDGSDAWRLEQIVDLLKNGAVGVIPTDTLPAIVCDLHNKDAVQRLYTVKEMDAK 111
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLS L +L + YTTGFP + G N F V+ +PGP
Sbjct: 112 KPLSCLVPNLSAVTQYTTGFPASNTPGSPNWFNVVRRLVPGP------------------ 153
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV---KWLKDNEWMVDPVVIADT 177
IL+ + L+ TSV + L ++ + D I +
Sbjct: 154 ------------------------TILEGVGGVLLCTSVHVPEVLSEDTEVPDVGSILEA 189
Query: 178 YGPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
YG +G+DFVVD G RV S+VVD TG P ++R G+G
Sbjct: 190 YGNKGIDFVVDVGRRVVVESSVVDFTGGDPVVLRHGQG 227
>gi|402757634|ref|ZP_10859890.1| hypothetical protein ANCT7_07985 [Acinetobacter sp. NCTC 7422]
Length = 205
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD YAI C + + +A+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ + QA+LQ++ PL+++++ + + + DP I + G
Sbjct: 112 ------HPKKKTIGLRIPSNPVAQALLQELGEPLLTSTLILPEQKDPLDDPYDIENQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G +++VD++G P+I+R+G G
Sbjct: 165 KRIDVFIDSGFGTLSTTSIVDLSGENPEIVRRGVG 199
>gi|161870640|ref|YP_001599813.1| hypothetical protein NMCC_1710 [Neisseria meningitidis 053442]
gi|161596193|gb|ABX73853.1| putative translation factor [Neisseria meningitidis 053442]
Length = 206
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TV+DMT GT +++RQG G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVIDMTDGT--ELVRQGCG 199
>gi|27573707|pdb|1KK9|A Chain A, Crystal Structure Of E. Coli Ycio
Length = 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A ER+ RI+ + ++
Sbjct: 24 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAXERICRIRQLPDGHNFTLX 83
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR K+ PG YTFIL +KEVP++ ++
Sbjct: 84 CRDLSELSTYSFV---------DNVAFRLXKNNTPGNYTFILKGTKEVPRRLLQ------ 128
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G R+P++ I QA+L+ + P +STS+ DP I D + +D
Sbjct: 129 --EKRKTIGXRVPSNPIAQALLEALGEPXLSTSLXLPGSEFTESDPEEIKDRLEKQ-VDL 185
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 186 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 215
>gi|389685056|ref|ZP_10176380.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas chlororaphis O6]
gi|425898190|ref|ZP_18874781.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388550709|gb|EIM13978.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas chlororaphis O6]
gi|397891337|gb|EJL07815.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 209
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD+ YAI C + SA+ER+RR++ ++
Sbjct: 4 FFQIHPENPQPRLIKQAVEIIRSGGVVIYPTDSSYAIGCQIGDKSAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S S+ + E M DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVSLIMPGETEPMNDPYEMRQLLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG STV+++ P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGGIMASTVINLADGEPEVIRIGCGDPAPFMVE 208
>gi|221134961|ref|ZP_03561264.1| Sua5/YciO/YrdC/YwlC family protein [Glaciecola sp. HTCC2999]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++ VEL+K+G V V PTD+ Y+I C + + SA+E++ RI+ ++ + +++
Sbjct: 9 PDNPQARLIKQAVELIKQGEVVVYPTDSGYSIGCQMDNKSALEQVCRIRELDKTHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR + ++ Y R D FR +K+ PGPYTF+ A+KEVPK+ +
Sbjct: 69 CRDVSELSDYA----RVDNVA----FRILKNNTPGPYTFVFKATKEVPKRL--------Q 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I AIL+++ P++ST++ + DP I + + +
Sbjct: 113 NPKRKTIGIRVPDNPIALAILEELGEPMMSTTLILPGETTAESDPEAIREQL-ERRVGLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG P+TV+D++ I+R+G G
Sbjct: 172 IHGGYLGEHPTTVIDLSEGEVVILREGSG 200
>gi|380302153|ref|ZP_09851846.1| translation factor SUA5 [Brachybacterium squillarum M-6-3]
Length = 205
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y++ P ++ V +L+EG + PTD+ YA+ C L SH +ER+RRI+ V +
Sbjct: 4 YLDIHPVDPQQRNVDQAVRVLREGGLIAYPTDSCYALGCTLDSHEGLERIRRIRQVGKNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + +FR VK+ PGPYTFIL A+KEVP++
Sbjct: 64 HFTLVCADFAQLGQFVI--------VSNPMFRLVKNSTPGPYTFILPATKEVPRRM---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ + VGVRIP+ + A+++ + P++S+++ + + V+ D +
Sbjct: 112 ----SHPKKLTVGVRIPDHRVAHALVETLGEPIVSSTLLLPGQEDPPSEGWVVQDLLDHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD ++D G EP+TVVD++G +I R+G G
Sbjct: 168 -LDVIIDSGPVGVEPTTVVDLSGGDVEIAREGAG 200
>gi|167624539|ref|YP_001674833.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella halifaxensis
HAW-EB4]
gi|167354561|gb|ABZ77174.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella halifaxensis
HAW-EB4]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V ++K G V V PTD+ YA+ C + +A+ ++ RI+ ++ S++CR ++ TY
Sbjct: 21 VNVIKSGGVIVYPTDSGYALGCLIGDKNAMSKIARIRQIDNDHNFSLMCRDQSELATYA- 79
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
R D Q +R +K PGPYTFI ASKEVPK+ + +K +G+R+P
Sbjct: 80 ---RVDNQA----YRLLKQNTPGPYTFIFMASKEVPKRL--------QNPKKKTIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+ + PL+STS+ DP I D + +D ++ GG +P+T
Sbjct: 125 DNVIALALLEALGEPLMSTSLILPGQEFTESDPEHIRDILEHQ-VDLIIHGGYLGEKPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D++ ++IR+G G
Sbjct: 184 VIDLSDGEIEVIREGAG 200
>gi|23200231|pdb|1K7J|A Chain A, Structural Genomics, Protein Tf1
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++++G V V PTD+ YA+ C ++ +A ER+ RI+ + ++
Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAXERICRIRQLPDGHNFTLX 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSF---------VDNVAFRLXKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G R+P++ I QA+L+ + P +STS+ DP I D + +D
Sbjct: 114 --EKRKTIGXRVPSNPIAQALLEALGEPXLSTSLXLPGSEFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
>gi|392548197|ref|ZP_10295334.1| RNA binding protein [Pseudoalteromonas rubra ATCC 29570]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + V+++++G V V PTD+ YAI C L + A ER+ RI+ +E
Sbjct: 4 FFHIHPDNPQGRLIRQAVDIIQQGGVIVYPTDSGYAIGCSLGNKQAKERIERIRGIEKHH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ TY R D Q +FR +K+ PGPYTFIL +KEVP++ +
Sbjct: 64 NFTLMCRDLSELSTYA----RVDNQ----MFRMIKNNTPGPYTFILKGTKEVPRRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+R+ I A+L ++ PL+S S+ + DP I +
Sbjct: 114 ------EKKKTIGIRVTEHPITAALLTELGEPLMSCSLILPDEQFTESDPDDIRLRL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GG V + +TV+DM+ I+R+G G
Sbjct: 167 HVDLIIHGGYLVEQATTVIDMSDDEVVILRRGCG 200
>gi|443290328|ref|ZP_21029422.1| conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
gi|385886655|emb|CCH17496.1| conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + V +L++ G + PTD+ YA+ L + ++R+R+I+ ++
Sbjct: 4 YYDVHPENPQPRIIGQVADLIRGGGLVAYPTDSCYALGIQLGNQDGLDRIRQIRRLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR + + Q + +FR VK PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCRDFAQLGQFV--------QINNAVFRLVKASTPGSYTFILPATKEVPRRML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ VGVR+P + QA+L ++ PL+S+++ ++E M I + +
Sbjct: 113 -----HPKKRTVGVRVPRHTVTQALLAELGEPLVSSTLALPGEDEPMTQGWEIKERLDHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G EP+TV+D++G P+I+R+G G
Sbjct: 168 -LDAVLDAGECGKEPTTVIDLSGPEPEILRRGAG 200
>gi|417474857|ref|ZP_12169822.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353646019|gb|EHC89555.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
Length = 193
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 113/198 (57%), Gaps = 19/198 (9%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++CR L ++ TY+
Sbjct: 8 VDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLMCRDLSELSTYSY 67
Query: 79 GFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRI 137
N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+
Sbjct: 68 ---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGLRV 110
Query: 138 PNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPS 197
P++ I A+L + P++STS+ + DP I D + +D ++ GG +P+
Sbjct: 111 PSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDLIIHGGYLGQQPT 169
Query: 198 TVVDMTGTYPKIIRQGKG 215
TV+D+T P ++R+G G
Sbjct: 170 TVIDLTNDSPVVLREGVG 187
>gi|86147036|ref|ZP_01065353.1| Putative translation factor [Vibrio sp. MED222]
gi|218709945|ref|YP_002417566.1| translation factor [Vibrio splendidus LGP32]
gi|407071146|ref|ZP_11101984.1| translation factor [Vibrio cyclitrophicus ZF14]
gi|85835101|gb|EAQ53242.1| Putative translation factor [Vibrio sp. MED222]
gi|218322964|emb|CAV19141.1| hypothetical translation factor [Vibrio splendidus LGP32]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++ ++L
Sbjct: 9 PDNPQARLITQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICKIRRIDDKHNFTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y R D FR +K PG YTFI A+KEVPK+ + AK
Sbjct: 69 CRDLSELSLYA----RVDNVA----FRLLKAHTPGAYTFIFKATKEVPKRLM-----NAK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I +L+ M PL+STS+ + DP I D+ +D +
Sbjct: 116 ---RKTIGIRVPDNKIALDLLEAMGEPLMSTSLILPGNETTESDPEEIRDSL-EHAVDVI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++GG +P+TV+D + ++R+G G
Sbjct: 172 LNGGYLGEQPTTVIDFSDDDAVVLRRGAG 200
>gi|146300671|ref|YP_001195262.1| Sua5/YciO/YrdC/YwlC family protein [Flavobacterium johnsoniae
UW101]
gi|146155089|gb|ABQ05943.1| translation factor SUA5 [Flavobacterium johnsoniae UW101]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+++ P + VV++L+ G + + PTDT+Y + CD+ + A+E++ +IK V+ K
Sbjct: 4 FIKIYPDKPSEAAIAKVVKVLQNGGLVIYPTDTVYGLGCDITNSRALEKIAKIKGVKLEK 63
Query: 62 P-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
S +C L ++ Y Q + F+ +K LPGPYTFIL + +PK
Sbjct: 64 ANFSFICHDLSNLSDYVR-------QIDTSTFKILKRALPGPYTFILPGNNNLPK----- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN-EWMVDPVVIADTYG 179
++ + VG+R+P++ I I++++ P++STS++ D E+ DP +I + +
Sbjct: 112 -----EFKKKTTVGIRVPDNNIVLEIVRQLGNPIVSTSIRDEDDVIEYTTDPELIFEKW- 165
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+DGG ST++D++ P ++R+GKG
Sbjct: 166 QNLVDMVIDGGYGDNVGSTIIDLSEHEPIVVREGKG 201
>gi|257465550|ref|ZP_05629921.1| hypothetical protein AM202_03495 [Actinobacillus minor 202]
gi|257451210|gb|EEV25253.1| hypothetical protein AM202_03495 [Actinobacillus minor 202]
Length = 205
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 18/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++K V V PTD+ YA+ C + + SA+ER+ +I+ + + +++
Sbjct: 9 PDNPQPRLINQAVEIIKNDGVIVYPTDSGYALGCAIGNKSAMERIVKIRKLPENHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ Y +R +K+ +P PYTFIL A+K+VP++ +
Sbjct: 69 CSDLSELSNY--------AMVSNQAYRLIKNNVPNPYTFILPATKDVPRRLL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P + I A++ + P++S S+ + DP I D + +D +
Sbjct: 113 -TKRKTIGIRVPQNEIALALISALGEPILSCSLMLPDEEITQSDPEAIRDLLERQ-VDLI 170
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG AEP+TV+D+T P IIR+G G
Sbjct: 171 IHGGYLGAEPTTVIDLTDDSPVIIREGSG 199
>gi|323492457|ref|ZP_08097605.1| hypothetical protein VIBR0546_15511 [Vibrio brasiliensis LMG 20546]
gi|323313244|gb|EGA66360.1| hypothetical protein VIBR0546_15511 [Vibrio brasiliensis LMG 20546]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPENPQARLINQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEISLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNRIALDLLEALGEPLMSTSLILPGSDVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TVVD + P I R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVVDFSEDEPVIARVGSG 200
>gi|330811305|ref|YP_004355767.1| hypothetical protein PSEBR_a4356 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423698864|ref|ZP_17673354.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens
Q8r1-96]
gi|327379413|gb|AEA70763.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997317|gb|EIK58647.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 209
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRGGGVVVYPTDSSYAIGCQIGDKNAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ ++E + DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGESEPLTDPYEMRQILEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGMSASTVINLADGEPQVVRVGCGDPTPFMVE 208
>gi|406036922|ref|ZP_11044286.1| hypothetical protein AparD1_08165 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 205
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVERIRAGDVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKANTPAITTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP + + QA+LQ++ PL+++++ + + DP I + G
Sbjct: 112 ------HPKKKTIGLRIPGNPVAQALLQELGEPLLTSTLILPDQKDPLDDPYDIENQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G +++VD++G P+IIR+G G
Sbjct: 165 KRIDVFIDSGFGTLSTTSIVDLSGENPEIIRRGVG 199
>gi|422012672|ref|ZP_16359334.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces georgiae F0490]
gi|394754291|gb|EJF37713.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces georgiae F0490]
Length = 197
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 19/199 (9%)
Query: 18 VVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYT 77
VV LL+EG V +PTD+ YAI C L + + ++ +R ++ ++ S+LC S +
Sbjct: 11 VVGLLREGGVVALPTDSGYAIACRLGNKAGMDTIRDVRRLDDKHNFSLLCSSFAQLGELV 70
Query: 78 TGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH-VGVR 136
H FR +K PGPYTFIL +KEVP+ + +KH VGVR
Sbjct: 71 I------LDNHE--FRTIKALTPGPYTFILRGTKEVPRMTLNK---------KKHTVGVR 113
Query: 137 IPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEP 196
+P+ AI QA++ + PL+ +++ E M D + + ++ G +D VV G V AEP
Sbjct: 114 LPDHAITQAVVSALGEPLLCSTLILPGQTEPMTDGLEVDESIGSR-VDLVVVGPVGDAEP 172
Query: 197 STVVDMTGTYPKIIRQGKG 215
+TVVD T +++R+G G
Sbjct: 173 TTVVDFTSGTAEVVRRGAG 191
>gi|90412190|ref|ZP_01220196.1| putative translation factor [Photobacterium profundum 3TCK]
gi|90326914|gb|EAS43299.1| putative translation factor [Photobacterium profundum 3TCK]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPETPQARLMTQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR ++ PG YTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEIANYA----RVDNAA----FRLLRSNTPGAYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+RIP++AI A+L+++ PL+STS+ + DP I D
Sbjct: 114 ------PKRKTIGIRIPDNAIALALLEELGEPLMSTSLILPNSDVAESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + +++R G G
Sbjct: 167 AVDLIMNGGYLGEQPTTVIDFSNDEMEVLRVGAG 200
>gi|335420674|ref|ZP_08551711.1| Sua5/YciO/YrdC/YwlC family protein [Salinisphaera shabanensis
E1L3A]
gi|334894410|gb|EGM32606.1| Sua5/YciO/YrdC/YwlC family protein [Salinisphaera shabanensis
E1L3A]
Length = 212
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 17/202 (8%)
Query: 14 KLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDI 73
++ V + L+ G V PTD+ Y + C + +AI+R+R+++ +++CR L +I
Sbjct: 16 RIGQVADALRAGRVIAYPTDSSYGLACAMGDKNAIDRIRQMRGFGRDHFFTLVCRDLSEI 75
Query: 74 DTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHV 133
TY + FR +K PG YTF+L ASK VP + RK +
Sbjct: 76 STY--------AKVENTSFRLLKAATPGAYTFVLPASKVVPNWLA--------HPKRKTI 119
Query: 134 GVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRV 193
G+R+P + +AI + MD P++S + + L D E + + LD +VDGG
Sbjct: 120 GIRVPAHPVARAIAEAMDEPIMSVTAQ-LPDAEIPLSEAFDVREAFDKQLDIIVDGGATG 178
Query: 194 AEPSTVVDMTGTYPKIIRQGKG 215
EP+TVVD+T P+I+R GKG
Sbjct: 179 VEPTTVVDLTTAVPQILRPGKG 200
>gi|417415385|ref|ZP_12159058.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353622831|gb|EHC72289.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++ +G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVHKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSYV---------DNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|425743487|ref|ZP_18861565.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-323]
gi|425493695|gb|EKU59921.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter baumannii WC-323]
Length = 205
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVERIRAGDVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ + QA+L+++ PL+++++ + + + DP I + G
Sbjct: 112 ------HPKKKTIGLRIPSNPVAQALLKELGEPLLTSTLILPEQKDPLDDPYDIENQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G +++VD++G P+I+R+G G
Sbjct: 165 KRIDVFIDSGFGTLSTTSIVDLSGENPEIVRRGVG 199
>gi|239985789|ref|ZP_04706453.1| hypothetical protein SrosN1_00630 [Streptomyces roseosporus NRRL
11379]
gi|239992609|ref|ZP_04713273.1| hypothetical protein SrosN1_35273 [Streptomyces roseosporus NRRL
11379]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P+ + VV+ L+ GA+ PTD+ YA+ C L + AI+R+R I+N++
Sbjct: 4 YFDVHPANPQPRTIGTVVDSLRSGALVAYPTDSCYALGCQLGNRDAIDRIRAIRNLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + F R D ++FRAVK PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCHDFAQL----AQFVRVDN----DVFRAVKAATPGSYTFILPATKEVPRQLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRIP+ + QA++ ++ PL+S+++ + E + I + E
Sbjct: 113 -----HPKKKTVGVRIPDHVVTQALVSELGEPLLSSTLLLPDEEEPLTQGWEIKERLDHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G EP+TV+D +G P+I+R+G G
Sbjct: 168 -VDAVIDSGDCGTEPTTVIDFSGDEPEIVRRGAG 200
>gi|229592266|ref|YP_002874385.1| hypothetical protein PFLU4879 [Pseudomonas fluorescens SBW25]
gi|229364132|emb|CAY51764.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 209
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRAGGVVIYPTDSSYAIGCQIGDKGAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KVDTGTFRLLKAHTPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P I A+L ++ PL+S S+ D E + DP + +
Sbjct: 113 -----HPKKRTIGLRVPEHPIALALLAELGEPLMSVSLIMPGDTEPLEDPYEMRQLLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 168 -VDLIIDGGFGGGKASTVINLADGEPEVIRVGCGDPAPFMVE 208
>gi|416074958|ref|ZP_11584806.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|444344131|ref|ZP_21152433.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|348006573|gb|EGY46982.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|443544723|gb|ELT54659.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRNGGVVVYPTDSGYALGCMIGDKHAMDRIVHIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSLVT--------NSAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGLD 184
RK +G+R+P++ I +L+ + P++S S+ L + E + DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHLTQSDPEEIRDRLEHQ-VD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+TG P I+R+G G
Sbjct: 171 LIIHGGYLGQEPTTVVDLTGDTPVILREGSG 201
>gi|205352606|ref|YP_002226407.1| hypothetical protein SG1394 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375123420|ref|ZP_09768584.1| hypothetical protein SG9_1422 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445132754|ref|ZP_21382340.1| hypothetical protein SEEG9184_011336 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|205272387|emb|CAR37267.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627670|gb|EGE34013.1| hypothetical protein SG9_1422 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444848398|gb|ELX73523.1| hypothetical protein SEEG9184_011336 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L + TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSGLSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|298493014|ref|YP_003723191.1| Sua5/YciO/YrdC/YwlC family protein ['Nostoc azollae' 0708]
gi|298234932|gb|ADI66068.1| Sua5/YciO/YrdC/YwlC family protein ['Nostoc azollae' 0708]
Length = 219
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 34/223 (15%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + ++E + L GA+ + PTDT+YAI CDL + SA+ER+R+IK + KPL+ L
Sbjct: 9 PDNPQNRRIEDIKLALSSGAIMLYPTDTVYAIGCDLNAKSAVERVRQIKQLGNDKPLTFL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C SL ++ TY F +R +K +PG YTF+L A+K VP+ +
Sbjct: 69 CPSLSNVATY--AFVSDIA------YRIMKRLIPGSYTFLLPATKLVPR--------LVQ 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW----------LKDNEWMVDPVVIAD 176
RK G+R+P+ +C A+L+ + P+ISTS D+E ++ V + D
Sbjct: 113 NPKRKTTGIRVPDHTVCLALLEALGNPIISTSAHLPPKDIDYEIAELDSENIMSRVELFD 172
Query: 177 TYGPEGLDFVVDGGVRVAEP----STVVDMTGTYPKIIRQGKG 215
+ +D ++D G EP ST++D+T P I R+G G
Sbjct: 173 RWD-NLVDIIIDTG---EEPTYHVSTILDLTDEEPVITRRGLG 211
>gi|359457477|ref|ZP_09246040.1| Sua5/YciO/YrdC/YwlC family protein [Acaryochloris sp. CCMEE 5410]
Length = 220
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 28/204 (13%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
L GAV + PTDT+YAI CD+ + +A++R+R+IK + KPL+ LC SL +I Y
Sbjct: 24 LLNGAVMLYPTDTVYAIGCDINAKAAVQRVRQIKQMSNDKPLTFLCSSLSNIAQY----- 78
Query: 82 RGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDA 141
+ +R ++ +PGPYTF+L A+K VPK + RK G+R+P+
Sbjct: 79 ---ARVSDPAYRIMRKLIPGPYTFLLPATKLVPK--------LVQNPKRKTTGIRVPDHP 127
Query: 142 ICQAILQKMDAPLISTSVK---------WLKDNEWMVDPVVIADTYGPEGLDFVVDGGVR 192
+C ++L + P+ISTS W K E + P + D + + +D +++ G
Sbjct: 128 VCLSLLDSLATPIISTSAHFSDQESVHGWSKKQEPL-SPAELFDHFDKQ-VDLIIENGQD 185
Query: 193 VA-EPSTVVDMTGTYPKIIRQGKG 215
++ + ST++D+ P ++R+G G
Sbjct: 186 LSTKVSTILDLCQDQPAVVREGLG 209
>gi|254672732|emb|CBA06707.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|240948953|ref|ZP_04753309.1| hypothetical protein AM305_08629 [Actinobacillus minor NM305]
gi|240296768|gb|EER47379.1| hypothetical protein AM305_08629 [Actinobacillus minor NM305]
Length = 205
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 18/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE++K V + PTD+ YA+ C + + SA+ER+ +I+ + + +++
Sbjct: 9 PDNPQPRLINQAVEIIKNDGVIIYPTDSGYALGCAIGNKSAMERIVKIRKLPENHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ Y +R +K+ +P PYTFIL A+K+VP++ +
Sbjct: 69 CSDLSELSNY--------AMVSNQAYRLIKNNVPNPYTFILPATKDVPRRLL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ RK +G+R+P + I A++ + P++S S+ + DP I D + +D +
Sbjct: 113 -TKRKTIGIRVPQNEIALALISALGEPILSCSLMLPDEEITQSDPEAIRDLLERQ-VDLI 170
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG AEP+TV+D+T P IIR+G G
Sbjct: 171 IHGGYLGAEPTTVIDLTDDSPVIIREGSG 199
>gi|433466604|ref|ZP_20424065.1| telomere recombination family protein [Neisseria meningitidis
87255]
gi|432204714|gb|ELK60753.1| telomere recombination family protein [Neisseria meningitidis
87255]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|426410823|ref|YP_007030922.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas sp. UW4]
gi|426269040|gb|AFY21117.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas sp. UW4]
Length = 222
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKVAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEQLGEPLMSVTLIMPGDEDPLTDPHEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+ + P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVISLADGEPEVIRVGCGDPAPFMVE 221
>gi|261867922|ref|YP_003255844.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|444346593|ref|ZP_21154557.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261413254|gb|ACX82625.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|443541411|gb|ELT51838.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRNGGVIVYPTDSGYALGCMIGDKHAMDRIVHIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSTYSLVT--------NSAYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGLD 184
RK +G+R+P++ I +L+ + P++S S+ L + E + DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHLTQSDPEEIRDRLEHQ-VD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+TG P I+R+G G
Sbjct: 171 LIIHGGYLGQEPTTVVDLTGDTPVILREGSG 201
>gi|398994244|ref|ZP_10697148.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM21]
gi|398132537|gb|EJM21809.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM21]
Length = 222
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YAI C + +A++R+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRSGGVVVYPTDSSYAIGCQIGDKNAVDRVRRLRGLDDKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFTLICSDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEQLGEPLMSVTLIMPGDIDPLTDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPSPFMAE 221
>gi|224826312|ref|ZP_03699414.1| Sua5/YciO/YrdC/YwlC family protein [Pseudogulbenkiania ferrooxidans
2002]
gi|224601413|gb|EEG07594.1| Sua5/YciO/YrdC/YwlC family protein [Pseudogulbenkiania ferrooxidans
2002]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 19/214 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++L+ G V V PTD+ YA+ C L +A+ER+ I+ ++ L+++
Sbjct: 9 PDNPQARLIREAVKILRAGGVIVYPTDSCYALGCLLGDKAAMERILDIRQLDLKHHLTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ Y R D + FR +K PG YTFIL ASKEVP++ +
Sbjct: 69 CADLSELSNYA----RVDN----SQFRQLKAATPGSYTFILQASKEVPRRTL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ R +G+R+P + A+L ++ P++S ++ D+E + DP I + + +D V
Sbjct: 113 HPKRATIGLRVPEHPVALALLAELGEPILSCTLSLPGDSEALTDPYEIRERMERQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLY 219
+DGG EP+TV+D+T +++R+GKG P L+
Sbjct: 172 IDGGWCGTEPTTVIDLTDGV-ELVRRGKGDPALF 204
>gi|408792436|ref|ZP_11204046.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408463846|gb|EKJ87571.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 208
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M + P + KL+ + E LK+GAV + PTDT+YAI+ D S +E++ I+ +
Sbjct: 1 MILYLHPENPEVRKLKQISERLKDGAVFIFPTDTVYAIIADAHSKLGVEKIYAIRKLPKD 60
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
KPLS++C+ + + P + +R +K PGP+TF+L A+K +PK V +
Sbjct: 61 KPLSLMCKDISMASNFIEYLPN-------SAYRLMKRVTPGPFTFVLKANKNLPKPSVAH 113
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
K +G+RIP+ +L+ D+PL STS + + + YG
Sbjct: 114 HKD-------KQIGIRIPDHIYLSELLKIHDSPLTSTSAFCDDEFIIDI--DDLESIYGN 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +VDGG+ E ST++ + +IR+GKG
Sbjct: 165 Q-VDGIVDGGIVKMELSTILQINDDSIDLIREGKG 198
>gi|395236152|ref|ZP_10414350.1| hypothetical protein A936_20767 [Enterobacter sp. Ag1]
gi|394729004|gb|EJF29015.1| hypothetical protein A936_20767 [Enterobacter sp. Ag1]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++++G V V PTD+ YA+ C ++ A+ER+ RI+ + +++
Sbjct: 9 PDNPQPRLINQAVDIIRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAF---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L+ ++ P++STS+ DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLEVLNEPMLSTSLMLPGSEFTESDPEEIKDRL-EKVVDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
V+ GG +P+TV+D+T P ++R+G G
Sbjct: 171 VIHGGYLGQQPTTVIDLTEDAPVVMREGVG 200
>gi|398894940|ref|ZP_10646948.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM55]
gi|398953746|ref|ZP_10675537.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM33]
gi|398153445|gb|EJM41945.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM33]
gi|398181683|gb|EJM69236.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM55]
Length = 222
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKVAVERVRRLRGLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICCDLSQLGLFA--------KIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S S+ + + M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEQLGEPLMSVSLIMPGETDPMYDPHEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPAPFMVE 221
>gi|149190890|ref|ZP_01869153.1| hypothetical protein VSAK1_01032 [Vibrio shilonii AK1]
gi|148835245|gb|EDL52219.1| hypothetical protein VSAK1_01032 [Vibrio shilonii AK1]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V + PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQARLINQAVAIVRNGGVIIYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I +L+ + PL+STS+ + DP I D
Sbjct: 114 ------PKRKTIGIRVPDNQIALDLLEALGEPLMSTSLILPGNEVTESDPEEIRDQL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + K++R G G
Sbjct: 167 AVDCILNGGYLGEQPTTVIDFSDDEAKVLRTGAG 200
>gi|385850681|ref|YP_005897196.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M04-240196]
gi|325205504|gb|ADZ00957.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria meningitidis
M04-240196]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTY--------AKVDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 -----HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 167 AVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|387120118|ref|YP_006286001.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415763883|ref|ZP_11482220.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416033644|ref|ZP_11573112.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416046644|ref|ZP_11575762.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|416069798|ref|ZP_11583394.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|444333502|ref|ZP_21149288.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|347994554|gb|EGY35824.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347998894|gb|EGY39784.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|347999551|gb|EGY40372.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348654464|gb|EGY70087.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385874610|gb|AFI86169.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|443551633|gb|ELT59416.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + VE+L+ G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQVRLINQAVEILRNGGVIVYPTDSGYALGCMIGDKHAMDRIVHIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ +
Sbjct: 69 CSDLSELSTYSLVT--------NSAYRLIKNNTPGRYTFILTATKELPRRLMA------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGLD 184
S RK +G+R+P++ I +L+ + P++S S+ L + E + DP I D + +D
Sbjct: 114 -SKRKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHLTQSDPEEIRDRLEHQ-VD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+TG P I+R+G G
Sbjct: 171 LIIHGGYLGQEPTTVVDLTGDTPVILREGSG 201
>gi|84394230|ref|ZP_00992958.1| Putative translation factor [Vibrio splendidus 12B01]
gi|84375144|gb|EAP92063.1| Putative translation factor [Vibrio splendidus 12B01]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 109/197 (55%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++ ++LCR L ++ Y
Sbjct: 21 VAIIRNGGVVVYPTDSGYALGCQLENKQALERICKIRRIDDKHNFTLLCRDLSELSLYA- 79
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
R D FR +K PG YTFI A+KEVPK+ + AK RK +G+R+P
Sbjct: 80 ---RVDNVA----FRLLKAHTPGAYTFIFKATKEVPKRLM-----NAK---RKTIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I +L+ M PL+STS+ + DP I D+ +D +++GG +P+T
Sbjct: 125 DNKIALDLLEAMGEPLMSTSLILPGNETTESDPEEIRDSL-EHAVDVILNGGYLGEQPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D + ++R+G G
Sbjct: 184 VIDFSDDDAVVLRRGAG 200
>gi|359438609|ref|ZP_09228621.1| RNA binding protein [Pseudoalteromonas sp. BSi20311]
gi|358026735|dbj|GAA64870.1| RNA binding protein [Pseudoalteromonas sp. BSi20311]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++K+G V V PTD+ YAI C+L + A ER+ RI+ +E +++
Sbjct: 9 PDNPQPRLISQAVDIIKQGGVVVYPTDSGYAIGCNLGNKQAKERIERIRGIEKHHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY R D Q +FR +K+ PGPYTFI +KEVPK+ +
Sbjct: 69 CRDLSELSTYA----RVDNQ----MFRLIKNNTPGPYTFIFKGTKEVPKRLLN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+ I A+L ++ PL+S S+ D DP I + + +D +
Sbjct: 114 -DKKKTIGIRVIEHPIACALLAELGEPLMSCSLILPGDEYTQADPDDILERLD-KHVDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG + +TV+D++ +I+R G G
Sbjct: 172 IHGGYLTEQATTVIDLSEDDIQILRVGCG 200
>gi|254805532|ref|YP_003083753.1| putative translation factor [Neisseria meningitidis alpha14]
gi|254669074|emb|CBA07599.1| putative translation factor [Neisseria meningitidis alpha14]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 64 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP++AI QA+L ++ PL+S ++ +D E + DP I +
Sbjct: 113 ------HPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG EP+TVVDMT GT +++R+G G
Sbjct: 166 HAVDLVIDGGWCGTEPTTVVDMTDGT--ELVRRGCG 199
>gi|429195983|ref|ZP_19187975.1| Sua5/YciO/YrdC/YwlC family protein [Streptomyces ipomoeae 91-03]
gi|428668299|gb|EKX67330.1| Sua5/YciO/YrdC/YwlC family protein [Streptomyces ipomoeae 91-03]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + V + +++GA+ V PTD+ +A+ C L S IER+R I+ ++
Sbjct: 4 YFDVHPDNPQPRAIGQVADSVRDGALIVYPTDSCFALGCQLGSRDGIERIRTIRQLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + + + ++FRAVK PG YTFIL A++EVP+K +
Sbjct: 64 HFTLVCENFAQLGQFV--------HVDNDVFRAVKASTPGSYTFILPATREVPRKLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ VGVRIP+ + QA+L ++ PL+S+++ + E + I + +
Sbjct: 113 -----HPKKRTVGVRIPDHRVAQALLAELGEPLVSSTLLLPDEEEPLTQGWEIKERLDHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VVD G EP+TV+D + +IIR+G G
Sbjct: 168 -VDAVVDSGDCGTEPTTVIDFSSGEAEIIRKGAG 200
>gi|269215181|ref|ZP_05987872.2| Sua5/YciO/YrdC/YwlC family protein [Neisseria lactamica ATCC 23970]
gi|269208121|gb|EEZ74576.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria lactamica ATCC 23970]
Length = 250
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VVE+L +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 48 FFAVHPDNPQERLIRQVVEILNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 107
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP + +
Sbjct: 108 HLTLMCADLSELGTY--------AEIDNVQFRQLKAATPGPYTFILQATKDVPARTL--- 156
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+RIP +A+ QA+L+++ PL+S ++ +D E + DP I +
Sbjct: 157 -----HPKRKTIGLRIPGNAVAQALLEELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 210
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG +P+TV+DMT GT +++R+G G
Sbjct: 211 AVDLVIDGGWCGTDPATVIDMTDGT--ELVRRGCG 243
>gi|113460885|ref|YP_718952.1| translation factor SUA5 [Haemophilus somnus 129PT]
gi|170717433|ref|YP_001784533.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus somnus 2336]
gi|112822928|gb|ABI25017.1| translation factor SUA5 [Haemophilus somnus 129PT]
gi|168825562|gb|ACA30933.1| Sua5/YciO/YrdC/YwlC family protein [Haemophilus somnus 2336]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 122/217 (56%), Gaps = 22/217 (10%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
YV ++ S + VE+L++G V V PTD+ YA+ C + A++R+ +I+ +
Sbjct: 5 FYVHSE--NPQSRLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVKIRQLPEG 62
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+++C L ++ TY+ + +++R +K+ PG YTFIL+A+KE+P++ +
Sbjct: 63 HNFTLVCSDLSELSTYSV--------VNNSVYRLIKNNTPGRYTFILSATKELPRRLM-- 112
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTY 178
T+K RK +G+R+P++ I +L+ + P++S S+ L E+ DP I D
Sbjct: 113 ---TSK---RKTIGIRVPDNQIALDLLKSLGEPILSCSL-MLPGEEYTTQSDPEEIRDRL 165
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++ GG +P+TVVD+T P I+R+G G
Sbjct: 166 EHQ-VDLIIHGGYLSQQPTTVVDLTEDNPVILREGSG 201
>gi|251792412|ref|YP_003007138.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter aphrophilus
NJ8700]
gi|416891629|ref|ZP_11923176.1| putative translation factor, SUA5 [Aggregatibacter aphrophilus ATCC
33389]
gi|422335969|ref|ZP_16416942.1| hypothetical protein HMPREF9335_00130 [Aggregatibacter aphrophilus
F0387]
gi|247533805|gb|ACS97051.1| Sua5/YciO/YrdC/YwlC family protein [Aggregatibacter aphrophilus
NJ8700]
gi|347815177|gb|EGY31817.1| putative translation factor, SUA5 [Aggregatibacter aphrophilus ATCC
33389]
gi|353346155|gb|EHB90440.1| hypothetical protein HMPREF9335_00130 [Aggregatibacter aphrophilus
F0387]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 120/211 (56%), Gaps = 20/211 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L++G V V PTD+ YA+ C + A++R+ +I+ + +++
Sbjct: 9 PENPQARLINQAVEILRKGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ Y+ P +++R +K+ PG YTFILTA+KE+P++ + T+K
Sbjct: 69 CSDLSELSNYSL-VPN-------SVYRLIKNNTPGRYTFILTATKELPRRLM-----TSK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYGPEGLD 184
RK +G+R+P++ I +L+ + P++S S+ L + E + DP I D + +D
Sbjct: 116 ---RKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHITQSDPEEIRDRLERQ-VD 170
Query: 185 FVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+T + P I+R+G G
Sbjct: 171 LIIHGGYLGQEPTTVVDLTDSTPIILREGSG 201
>gi|157961471|ref|YP_001501505.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella pealeana ATCC
700345]
gi|157846471|gb|ABV86970.1| Sua5/YciO/YrdC/YwlC family protein [Shewanella pealeana ATCC
700345]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 17/197 (8%)
Query: 19 VELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTT 78
V ++K G V V PTD+ YA+ C + A+ ++ RI+ ++ S++CR ++ TY
Sbjct: 21 VNVIKTGGVIVYPTDSGYALGCLIGDKDAMSKIARIRQIDNDHNFSLMCRDQSELATYA- 79
Query: 79 GFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIP 138
R D Q +R +K PGPYTFI ASKEVPK+ + +K +G+R+P
Sbjct: 80 ---RVDNQA----YRLLKQNTPGPYTFIFMASKEVPKRL--------QNPKKKTIGIRVP 124
Query: 139 NDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPST 198
++ I A+L+ + PL+STS+ DP I D + +D ++ GG +P+T
Sbjct: 125 DNVIALALLEALGEPLMSTSLILPGKEFTESDPEHIRDILEHQ-VDLIIHGGYLGEKPTT 183
Query: 199 VVDMTGTYPKIIRQGKG 215
V+D++ ++IR+G G
Sbjct: 184 VIDLSDGEIEVIREGAG 200
>gi|416424403|ref|ZP_11691659.1| hypothetical protein SEEM315_01811 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428487|ref|ZP_11693938.1| hypothetical protein SEEM971_11630 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416440730|ref|ZP_11701157.1| hypothetical protein SEEM973_05841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416445791|ref|ZP_11704619.1| hypothetical protein SEEM974_16300 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451005|ref|ZP_11707898.1| hypothetical protein SEEM201_01494 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416456848|ref|ZP_11711733.1| hypothetical protein SEEM202_14835 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416468782|ref|ZP_11718131.1| hypothetical protein SEEM954_09139 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416479234|ref|ZP_11722099.1| hypothetical protein SEEM054_03164 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416485839|ref|ZP_11724882.1| hypothetical protein SEEM675_03227 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416499865|ref|ZP_11731008.1| hypothetical protein SEEM965_10369 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416544206|ref|ZP_11752726.1| hypothetical protein SEEM19N_12191 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416579126|ref|ZP_11770984.1| hypothetical protein SEEM801_18172 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416585503|ref|ZP_11774869.1| hypothetical protein SEEM507_07019 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416593469|ref|ZP_11779938.1| hypothetical protein SEEM877_04046 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416598498|ref|ZP_11782849.1| hypothetical protein SEEM867_17434 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416608426|ref|ZP_11789420.1| hypothetical protein SEEM180_05885 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416614134|ref|ZP_11792467.1| hypothetical protein SEEM600_09039 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619286|ref|ZP_11795007.1| hypothetical protein SEEM581_00405 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416629264|ref|ZP_11799980.1| hypothetical protein SEEM501_04659 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416637498|ref|ZP_11803474.1| hypothetical protein SEEM460_05081 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416651290|ref|ZP_11811055.1| hypothetical protein SEEM020_010225 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416662608|ref|ZP_11815974.1| hypothetical protein SEEM6152_14301 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416666718|ref|ZP_11817751.1| hypothetical protein SEEM0077_19770 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416680392|ref|ZP_11823302.1| hypothetical protein SEEM0047_22885 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416688791|ref|ZP_11825247.1| hypothetical protein SEEM0055_13137 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416704280|ref|ZP_11830192.1| hypothetical protein SEEM0052_17269 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416712796|ref|ZP_11836482.1| hypothetical protein SEEM3312_15960 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416719989|ref|ZP_11841794.1| hypothetical protein SEEM5258_03733 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416724470|ref|ZP_11844890.1| hypothetical protein SEEM1156_03139 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416730897|ref|ZP_11848876.1| hypothetical protein SEEM9199_22439 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416739017|ref|ZP_11853641.1| hypothetical protein SEEM8282_02206 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416750226|ref|ZP_11859633.1| hypothetical protein SEEM8283_12880 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416757652|ref|ZP_11863254.1| hypothetical protein SEEM8284_12339 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416761415|ref|ZP_11865476.1| hypothetical protein SEEM8285_08414 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416769178|ref|ZP_11870950.1| hypothetical protein SEEM8287_13334 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418485401|ref|ZP_13054383.1| hypothetical protein SEEM906_17089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490114|ref|ZP_13056667.1| hypothetical protein SEEM5278_16731 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418496088|ref|ZP_13062523.1| hypothetical protein SEEM5318_06528 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418499544|ref|ZP_13065951.1| hypothetical protein SEEM5320_18676 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418502622|ref|ZP_13068991.1| hypothetical protein SEEM5321_05315 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418507414|ref|ZP_13073736.1| hypothetical protein SEEM5327_00265 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418527551|ref|ZP_13093508.1| hypothetical protein SEEM8286_14852 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|322614979|gb|EFY11904.1| hypothetical protein SEEM315_01811 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621427|gb|EFY18281.1| hypothetical protein SEEM971_11630 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623231|gb|EFY20073.1| hypothetical protein SEEM973_05841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628521|gb|EFY25309.1| hypothetical protein SEEM974_16300 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633685|gb|EFY30425.1| hypothetical protein SEEM201_01494 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638507|gb|EFY35202.1| hypothetical protein SEEM202_14835 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640823|gb|EFY37472.1| hypothetical protein SEEM954_09139 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645313|gb|EFY41841.1| hypothetical protein SEEM054_03164 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322651804|gb|EFY48176.1| hypothetical protein SEEM675_03227 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654299|gb|EFY50621.1| hypothetical protein SEEM965_10369 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659264|gb|EFY55512.1| hypothetical protein SEEM19N_12191 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662734|gb|EFY58941.1| hypothetical protein SEEM801_18172 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667655|gb|EFY63815.1| hypothetical protein SEEM507_07019 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671931|gb|EFY68052.1| hypothetical protein SEEM877_04046 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677023|gb|EFY73087.1| hypothetical protein SEEM867_17434 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680315|gb|EFY76354.1| hypothetical protein SEEM180_05885 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685256|gb|EFY81252.1| hypothetical protein SEEM600_09039 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195434|gb|EFZ80613.1| hypothetical protein SEEM581_00405 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199315|gb|EFZ84409.1| hypothetical protein SEEM501_04659 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204773|gb|EFZ89769.1| hypothetical protein SEEM460_05081 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209959|gb|EFZ94868.1| hypothetical protein SEEM6152_14301 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217256|gb|EGA01977.1| hypothetical protein SEEM0077_19770 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220711|gb|EGA05156.1| hypothetical protein SEEM0047_22885 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227965|gb|EGA12117.1| hypothetical protein SEEM0055_13137 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323232120|gb|EGA16227.1| hypothetical protein SEEM0052_17269 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234647|gb|EGA18734.1| hypothetical protein SEEM3312_15960 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238099|gb|EGA22158.1| hypothetical protein SEEM5258_03733 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243297|gb|EGA27316.1| hypothetical protein SEEM1156_03139 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248446|gb|EGA32381.1| hypothetical protein SEEM9199_22439 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252552|gb|EGA36395.1| hypothetical protein SEEM8282_02206 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255423|gb|EGA39189.1| hypothetical protein SEEM8283_12880 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260825|gb|EGA44427.1| hypothetical protein SEEM8284_12339 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267588|gb|EGA51071.1| hypothetical protein SEEM8285_08414 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270946|gb|EGA54382.1| hypothetical protein SEEM8287_13334 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|366055291|gb|EHN19626.1| hypothetical protein SEEM906_17089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366057335|gb|EHN21637.1| hypothetical protein SEEM5318_06528 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366067203|gb|EHN31355.1| hypothetical protein SEEM5278_16731 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366071036|gb|EHN35137.1| hypothetical protein SEEM5320_18676 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366074346|gb|EHN38408.1| hypothetical protein SEEM5321_05315 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366081361|gb|EHN45308.1| hypothetical protein SEEM5327_00265 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366828172|gb|EHN55070.1| hypothetical protein SEEM020_010225 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372205020|gb|EHP18547.1| hypothetical protein SEEM8286_14852 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + V+++ +G V V PTD+ YA+ C ++ A+ER+ RI+++ +++
Sbjct: 9 PDNPQQRLINQAVDIVLKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYSY---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I A+L + P++STS+ + DP I D + +D
Sbjct: 114 --EKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTNDSPVVLREGVG 200
>gi|312962721|ref|ZP_07777210.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens WH6]
gi|311283096|gb|EFQ61688.1| SUA5/YciO/YrdC/YwlC family protein [Pseudomonas fluorescens WH6]
Length = 222
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRAGGVVIYPTDSSYAIGCQIGDKGAVERVRRLRQLDDKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K PGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLFA--------KVDTGTFRLLKAHTPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P I A+L ++ PL+S S+ D E + DP + +
Sbjct: 126 -----HPKKRTIGLRVPEHPIALALLAELGEPLMSVSLIMPGDTEPLEDPYEMRQLLEKQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P+++R G G +M E
Sbjct: 181 -VDLIIDGGFGGGKASTVINLADGEPEVVRVGCGDPAPFMVE 221
>gi|284007497|emb|CBA72979.1| dsRNA-binding protein [Arsenophonus nasoniae]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
++ P + V +L +G + V PTD+ YAI C L + +A+ ++ R++ ++
Sbjct: 5 LQIHPQNPQPRLISQCVNILNKGGIIVYPTDSGYAIGCKLDNKNALTQICRLRQLDSRHN 64
Query: 63 LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGT 122
+++CR+L +I Y +FR +K+ PG YTFIL A+KEVP++ +
Sbjct: 65 FTLMCRNLSEIAEY--------AYLDNPVFRMIKNSTPGHYTFILRATKEVPRRIMN--- 113
Query: 123 TTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEG 182
RK +G+R+P++ I + +L + PL+STS+ D+ I G E
Sbjct: 114 -----KKRKTIGIRLPSNPIAKDLLNGIGEPLLSTSLILPGDDFAQSSAEEIESLIG-EQ 167
Query: 183 LDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG + +TVVD+T + P IIR G G
Sbjct: 168 VDLIINGGYLSEKSTTVVDLTESTPNIIRVGMG 200
>gi|336124498|ref|YP_004566546.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio anguillarum 775]
gi|335342221|gb|AEH33504.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio anguillarum 775]
Length = 206
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQTRLITQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSFYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+PN+ I +L+ + PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPNNRIALDLLEALGEPLMSTSLILPGNTHTESDPEEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + + R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVIDFSEDEMVVARVGAG 200
>gi|313203740|ref|YP_004042397.1| translation factor sua5 [Paludibacter propionicigenes WB4]
gi|312443056|gb|ADQ79412.1| translation factor SUA5 [Paludibacter propionicigenes WB4]
Length = 201
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 119/217 (54%), Gaps = 21/217 (9%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
M ++ + + ++ VVE+L++G + + PTD +YA C++ + S +E + ++K +
Sbjct: 1 MLIKIYDTNPNPIEIRRVVEVLRKGGIIIFPTDGVYAFGCNIFNASGVEFIAKLKEHDMR 60
Query: 61 KP-LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVR 119
K LS +C + I Y + D F+ +K LPGP+TFIL S ++PK
Sbjct: 61 KANLSFICHEMSQISEYA----KMDDVS----FKLMKRNLPGPFTFILNGSSKLPK---- 108
Query: 120 YGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTY 178
+ +K VG+R+P + I I++++ PL+++S+ K E++ DP +I + Y
Sbjct: 109 ------LFKNKKTVGIRMPQNNIALEIVRELGNPLMTSSIFTDEKTTEYITDPELIEEKY 162
Query: 179 GPEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
G + +D V+DGG+ ST+VD T P IIRQG G
Sbjct: 163 GHQ-VDMVIDGGMGGLIHSTIVDCTEDEPVIIRQGAG 198
>gi|398925295|ref|ZP_10661789.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM48]
gi|398172202|gb|EJM60076.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM48]
Length = 222
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE++++G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQPRLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKVAVERVRRLRGLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICCDLSQLGLF--------AKIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L+++ PL+S S+ + + M DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLEQLGEPLMSVSLIMPGETDPMYDPYEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVINLADGEPEVIRVGCGDPAPFMVE 221
>gi|299531543|ref|ZP_07044949.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni S44]
gi|298720506|gb|EFI61457.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni S44]
Length = 214
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++ ++L++GA+ VPTD+ YA+VC L +A++R+RRI+ + L
Sbjct: 6 EVYPENPQPRIIKQAADMLRKGAILAVPTDSSYALVCHLDDKNAVDRMRRIRQINDKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y R D + +R +K PGPYTFIL ASKEVPK+
Sbjct: 66 TLLCRDLSELANYA----RVDNRQ----YRLLKLATPGPYTFILEASKEVPKRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK +G+R+P+ Q +L+++ PL++T++ + E + D I + + P L
Sbjct: 112 --SHPSRKTIGLRVPDRKGLQLLLEELGEPLLATTLIAPGETEPLNDAESILERF-PHEL 168
Query: 184 DFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
D VVD G +P+TV+D+T P ++RQG G
Sbjct: 169 DAVVDSGACPQQPTTVLDLTPMALNNPPVVVRQGMG 204
>gi|365538657|ref|ZP_09363832.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio ordalii ATCC 33509]
Length = 206
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ ++
Sbjct: 4 FFYVHPENPQTRLITQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSELSFYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+PN+ I +L+ + PL+STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPNNRIALDLLEALGEPLMSTSLILPGNTHTESDPEEIRDRL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + I R G G
Sbjct: 167 TVDVILNGGYLGEQPTTVIDFSEDEMVIARVGAG 200
>gi|264676972|ref|YP_003276878.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni CNB-2]
gi|262207484|gb|ACY31582.1| Sua5/YciO/YrdC/YwlC family protein [Comamonas testosteroni CNB-2]
Length = 214
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 4 EADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPL 63
E P ++ ++L++GA+ VPTD+ YA+VC L +A++R+RRI+ + L
Sbjct: 6 EVYPENPQPRIIKQAADMLRKGAILAVPTDSSYALVCHLDDKNAVDRMRRIRQINDKHHL 65
Query: 64 SILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTT 123
++LCR L ++ Y R D + +R +K PGPYTFIL ASKEVPK+
Sbjct: 66 TLLCRDLSELANYA----RVDNRQ----YRLLKLATPGPYTFILEASKEVPKRL------ 111
Query: 124 TAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGL 183
+ RK +G+R+P+ Q +L+++ PL++T++ + E + D I + + P L
Sbjct: 112 --SHPSRKTIGLRVPDRKGLQLLLEELGEPLLATTLIAPGETEPLNDAESILERF-PHEL 168
Query: 184 DFVVDGGVRVAEPSTVVDMT----GTYPKIIRQGKG 215
D VVD G +P+TV+D+T P ++RQG G
Sbjct: 169 DAVVDSGACPQQPTTVLDLTPMALNNPPVVVRQGMG 204
>gi|417333509|ref|ZP_12117025.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|437370001|ref|ZP_20749130.1| hypothetical protein SEEE2558_11386 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437582799|ref|ZP_20792448.1| hypothetical protein SEEE1392_00993 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|445256671|ref|ZP_21409424.1| hypothetical protein SEE436_017292 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|353578208|gb|EHC40127.1| YciO family protein [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|435207163|gb|ELN90654.1| hypothetical protein SEEE2558_11386 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435263942|gb|ELO42972.1| hypothetical protein SEEE1392_00993 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|444889039|gb|ELY12527.1| hypothetical protein SEE436_017292 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 183
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 110/195 (56%), Gaps = 19/195 (9%)
Query: 22 LKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFP 81
+++G V V PTD+ YA+ C ++ A+ER+ RI+++ +++CR L ++ TY+
Sbjct: 1 MRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLMCRDLSELSTYSY--- 57
Query: 82 RGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPND 140
N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++
Sbjct: 58 ------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGLRVPSN 103
Query: 141 AICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVV 200
I A+L + P++STS+ + DP I D + +D ++ GG +P+TV+
Sbjct: 104 PIALALLDTLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKQ-VDLIIHGGYLGQQPTTVI 162
Query: 201 DMTGTYPKIIRQGKG 215
D+T P ++R+G G
Sbjct: 163 DLTNDSPVVLREGVG 177
>gi|88798246|ref|ZP_01113832.1| hypothetical protein MED297_13347 [Reinekea blandensis MED297]
gi|88779022|gb|EAR10211.1| hypothetical protein MED297_13347 [Reinekea sp. MED297]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P ++ E++ +G V PTD+ YA+ C + + ++ +RRI+ ++ L+++
Sbjct: 9 PDNPQPRLIKQAAEIVLQGGVIAYPTDSAYALGCLMGNKRGMDAIRRIRQIDEKHNLTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L D+ Y + D FR +K+ PGPYTFIL A++EVP+K +
Sbjct: 69 CRDLSDLANYA----KVDNVA----FRLIKNNTPGPYTFILQATREVPRKLL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ R+ +G+R+ + I A+L + P++S+++ D + + DP I + E LD V
Sbjct: 113 HPKRRTIGLRVLANNIASALLDAVGEPMLSSTLILPNDEDPLNDPYYIREILEHE-LDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+DGG E STVV + P+I+R G G
Sbjct: 172 IDGGFCGFEESTVVSLLDDVPEILRVGAG 200
>gi|30249687|ref|NP_841757.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosomonas europaea ATCC
19718]
gi|30180724|emb|CAD85636.1| SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
[Nitrosomonas europaea ATCC 19718]
Length = 210
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V+++++G V PTD+ YA+ C + + A++R+R I+ V+ +
Sbjct: 4 FFSIHPQTPHTRLIRQAVDIVRKGGVIAYPTDSCYALGCQIGNKEAMDRIRTIRKVDQNH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L +I TY + +R +K PG YTFIL A++EVP++
Sbjct: 64 NFTLVCRDLAEIATY--------AKVDNAQYRLLKAATPGSYTFILAATREVPRRL---- 111
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ R +G+RIP+ + QA+L ++D PL+S+++ D + D I +
Sbjct: 112 ----QHPKRHTIGLRIPDHPVVQALLAELDEPLLSSTLILPGDELPLNDAGEIRQRLEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ V+D G + +TV+D+T T PK+ R GKG
Sbjct: 168 -IELVMDAGSCGTDMTTVIDLTETTPKVARSGKG 200
>gi|415768853|ref|ZP_11484007.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|348657699|gb|EGY75285.1| SUA5 protein [Aggregatibacter actinomycetemcomitans D17P-2]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE+L+ G V + PTD+ YA+ C + A++R+ I+ +
Sbjct: 4 FFYIHPENPQVRLINQAVEILRNGGVILYPTDSGYALGCMIGDKHAMDRIVHIRQLPEGH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ +
Sbjct: 64 NFTLVCSDLSELSTYSLVT--------NSAYRLIKNNTPGRYTFILTATKELPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMV--DPVVIADTYG 179
T+K RK +G+R+P++ I +L+ + P++S S+ L + E + DP I D
Sbjct: 113 --TSK---RKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHLTQSDPEEIRDRLE 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++ GG EP+TVVD+TG P I+R+G G
Sbjct: 167 HQ-VDLIIHGGYLGQEPTTVVDLTGDTPVILREGSG 201
>gi|383935098|ref|ZP_09988536.1| yrdC domain protein [Rheinheimera nanhaiensis E407-8]
gi|383703863|dbj|GAB58627.1| yrdC domain protein [Rheinheimera nanhaiensis E407-8]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P L+ V+++++G V ++PTD+ YA+ C + +A+ER+ +I+ +
Sbjct: 4 FFHIHPETPQQRLLKQAVQIIQQGGVVILPTDSGYALGCHVGDKNAMERILQIRQISGEH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++CR L ++ Y + FR +K+ PG YTFIL +KE+PK+ +
Sbjct: 64 HFTLMCRDLSELSAY--------AKVENTAFRLIKNNTPGAYTFILRGTKELPKRLLN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+K +G+RIP I A+L ++ PL++TS+ + DP + +
Sbjct: 114 ------EKKKTIGLRIPEHKIALALLAELGEPLLTTSLILPGEEFAESDPEEMRARLEKQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D ++ GGV P+TVVD++ P I+R+G+G
Sbjct: 168 -VDLIMHGGVIGEAPTTVVDLSEDEPLIVREGRG 200
>gi|322515423|ref|ZP_08068414.1| Sua5/YciO/YrdC/YwlC family protein [Actinobacillus ureae ATCC
25976]
gi|322118546|gb|EFX90779.1| Sua5/YciO/YrdC/YwlC family protein [Actinobacillus ureae ATCC
25976]
Length = 205
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE++K G V + PTD+ YA+ C + AI+R+ I+ + + +++
Sbjct: 9 PDNPQARLINQAVEIIKNGGVIIYPTDSGYALGCAIGEKHAIDRIVAIRKLPENHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY + +R +K+ P PYTFIL A+K+VP++ +
Sbjct: 69 CSDLSELSTYALVTNQS--------YRLIKNNTPNPYTFILPATKDVPRRLM-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWM-VDPVVIADTYGPEGLDF 185
+ RK +G+R+P++AI A++ ++ P++S S+ L D E DP I + + +D
Sbjct: 113 -TKRKTIGIRVPDNAIALALIAELGEPILSCSL-MLPDTEITESDPDEIRE-HLEHRVDL 169
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TV+D+T P+IIR+G G
Sbjct: 170 IIHGGYLGQEPTTVIDLTEDSPRIIREGSG 199
>gi|343511275|ref|ZP_08748449.1| hypothetical protein VIS19158_01869 [Vibrio scophthalmi LMG 19158]
gi|343516484|ref|ZP_08753519.1| hypothetical protein VIBRN418_18248 [Vibrio sp. N418]
gi|342796069|gb|EGU31764.1| hypothetical protein VIBRN418_18248 [Vibrio sp. N418]
gi|342798608|gb|EGU34207.1| hypothetical protein VIS19158_01869 [Vibrio scophthalmi LMG 19158]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPENPQARLITQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEISLYA----RVDNAA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + P++STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNRIALDLLEALGEPMMSTSLILPGNEVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + +++R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVIDFSEGEAELVRLGAG 200
>gi|308050243|ref|YP_003913809.1| translation factor SUA5 [Ferrimonas balearica DSM 9799]
gi|307632433|gb|ADN76735.1| translation factor SUA5 [Ferrimonas balearica DSM 9799]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S + V + +G V V PTD+ YA+ C + SA+ER+ RI+ + +++
Sbjct: 9 PENPQSRLINQAVATIHKGGVIVYPTDSGYALGCHIGDKSALERICRIRRLNEHHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y R D FR +K+ PGPYTFI +KEVP++ + AK
Sbjct: 69 CRDLSELSLYA----RVDNAA----FRLLKNNTPGPYTFIFKGTKEVPRRLL-----NAK 115
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
RK +G+R+P++ I A+L+ + P++STS+ + DP I D + +D +
Sbjct: 116 ---RKTIGIRVPDNNIALALLEALGEPMMSTSLILPGETLAESDPDDIRDKLEHQ-VDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG P+TVVD + +I+R G G
Sbjct: 172 LHGGFLGESPTTVVDFSEGEGEIVRVGAG 200
>gi|421863485|ref|ZP_16295182.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379075|emb|CBX22377.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE+L +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 4 FFAVHPDNPQERLIRQAVEILNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
L+++C L ++ TY + FR +K PGPYTFIL A+K+VP +
Sbjct: 64 HLTLMCADLSELGTY--------AEIDNVQFRQLKAATPGPYTFILQATKDVPAR----- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
A + RK +G+RIP +A+ QA+L+++ PL+S ++ +D E + DP I +
Sbjct: 111 ---ALHPKRKTIGLRIPGNAVAQALLEELGEPLLSCTLMLPEDGEPLTDPYEIRERL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG +P+TV+DMT GT +++R+G G
Sbjct: 167 AVDLVIDGGWCGTDPATVIDMTDGT--ELVRRGCG 199
>gi|340360100|ref|ZP_08682571.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces sp. oral taxon 448
str. F0400]
gi|339883867|gb|EGQ73699.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces sp. oral taxon 448
str. F0400]
Length = 205
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+E P+ + ++ +V +L+EG + PTD+ YA+ C ++ ++R+R I+ ++
Sbjct: 4 YIELHPANPQTRLVDKIVAVLEEGGLIAYPTDSGYALACAPRNKEGMDRIRAIRQLDSKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+ +C G+ N FR +K PGP+TFIL +KEVP+ +
Sbjct: 64 NFTFVCADFAQAGPLAI---VGN-----NAFRLIKRLTPGPWTFILKGTKEVPRMTL--- 112
Query: 122 TTTAKYSLRKH-VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +KH +GVRIP+ I QA++ DAP++S++ E I DT G
Sbjct: 113 ------NPKKHTLGVRIPDHTIAQALVSGFDAPILSSTFIRPGRTEPESSGWQIEDTLG- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VV+G V EP+TVVD+T P+++R+G G
Sbjct: 166 HLIDVVVEGPVGSTEPTTVVDLTDDAPEVVREGSG 200
>gi|372489353|ref|YP_005028918.1| Sua5/YciO/YrdC/YwlC family protein [Dechlorosoma suillum PS]
gi|359355906|gb|AEV27077.1| Sua5/YciO/YrdC/YwlC family protein [Dechlorosoma suillum PS]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+ P L ++L+EG + PTD+ Y++ C L A++RLR I+ V+
Sbjct: 4 YLSLHPDNPQPRMLAKAAQVLREGGLIAFPTDSCYSLACHLGDKEALDRLRAIRGVDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++++CR L I F R D +R +K PG Y FIL +KE+P++ +
Sbjct: 64 HMTLMCRDLSQI----AHFARVDNAQ----YRLLKTVTPGSYVFILEGTKELPRRVM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ RK +G+R+P+ A+L++ PL++ +++ D + + I D +
Sbjct: 113 -----HPKRKTIGLRVPDHLGALALLEEFGEPLLTATLQLPGDEAPLTEGWEIQDRLDDQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
L+ ++DGG EP+TV+D+T P+++R G+G
Sbjct: 168 -LELILDGGHCGTEPTTVIDLTSGAPELVRAGRG 200
>gi|226953462|ref|ZP_03823926.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter sp. ATCC 27244]
gi|226835804|gb|EEH68187.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter sp. ATCC 27244]
Length = 205
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + V+ ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVDRIRAGDVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ + QA+L+++ PL+++++ + + DP I + G
Sbjct: 112 ------HPKKKTIGLRIPSNPVAQALLKELGEPLLTSTLILPDQKDPLDDPYDIENQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G +++VD++G P+IIR+G G
Sbjct: 165 KRIDVFIDSGFGTLSTTSIVDLSGENPEIIRRGVG 199
>gi|378952425|ref|YP_005209913.1| Sua5 family protein [Pseudomonas fluorescens F113]
gi|359762439|gb|AEV64518.1| Sua5 family protein [Pseudomonas fluorescens F113]
Length = 209
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE+++ G V V PTD+ YAI C + +A+ER+RR++ ++
Sbjct: 4 FFQIHPENPQARLIKQAVEIIRGGGVVVYPTDSSYAIGCQIGDKNAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KIDTGTFRLLKAHLPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ + + + DP + +
Sbjct: 113 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGETDPLTDPYEMRQILEHQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG STV+++ P+++R G G +M E
Sbjct: 168 -VDLIIDGGFGGMSASTVINLADGEPQVVRVGCGDPTPFMVE 208
>gi|238786121|ref|ZP_04630076.1| hypothetical protein yberc0001_36560 [Yersinia bercovieri ATCC
43970]
gi|238712973|gb|EEQ05030.1| hypothetical protein yberc0001_36560 [Yersinia bercovieri ATCC
43970]
Length = 178
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 107/187 (57%), Gaps = 17/187 (9%)
Query: 29 VVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGH 88
V PTD+ YA+ C L+ +A+ER+ RI+ ++ + +++CR L ++ TY
Sbjct: 3 VYPTDSGYALGCRLEDKTAMERICRIRQLDGNHNFTLVCRDLSELSTY--------AYVD 54
Query: 89 ANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQ 148
+ FR +K+ PG YTFIL A+KEVP++ + RK +G+R+P++ I A+L
Sbjct: 55 NSAFRLIKNNTPGNYTFILKATKEVPRRLMN--------DKRKTIGLRVPSNPIALALLD 106
Query: 149 KMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTYPK 208
+ PL+ST++ ++ DP I + G + +D ++ GG +P+TV+D+T +
Sbjct: 107 VLGEPLMSTTLMLPGNDFAESDPEEIKEHLGKQ-VDLIIHGGSLGQQPTTVIDLTDSSVA 165
Query: 209 IIRQGKG 215
+IR+G G
Sbjct: 166 VIREGAG 172
>gi|77360238|ref|YP_339813.1| RNA binding protein [Pseudoalteromonas haloplanktis TAC125]
gi|76875149|emb|CAI86370.1| putative RNA binding protein with YrdC/RibB domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P S ++ +++K+G V V PTD+ YAI C++ + A ER+ RI+ +E +++
Sbjct: 9 PENPQSRLIQQAADIIKQGGVVVYPTDSGYAIGCNIGNKQAKERIERIRGIEKHHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ TY R D Q FR +K+ PGPYTFI +KEVPK+ +
Sbjct: 69 CRDLSELSTYA----RVDNQ----TFRLIKNNTPGPYTFIFKGTKEVPKRLLN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+K +G+R+ I A+L+++ PL+S S+ + DP I + +D +
Sbjct: 114 -DKKKTIGIRVIAHPIACALLEELGEPLMSCSLILPGEEYTESDPDEIIERLDKH-VDLI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ GG + +TVVD++ +I+R G G
Sbjct: 172 IHGGYLAEQATTVVDLSEDEVQILRVGCG 200
>gi|397670279|ref|YP_006511814.1| Sua5/YciO/YrdC/YwlC family protein [Propionibacterium propionicum
F0230a]
gi|395141086|gb|AFN45193.1| Sua5/YciO/YrdC/YwlC family protein [Propionibacterium propionicum
F0230a]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P L +V +L+EG + PTD+ YA+ C L + S IER+RRI+ +
Sbjct: 4 YYDVHPENPQPRTLSQMVRILEEGGLIAYPTDSCYALGCALGNGSGIERIRRIRQLGDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++ + + + +FRAVK PGPYTFIL A++EVPK
Sbjct: 64 HFTLVISEFSQLGAFV--------EMDNWVFRAVKAATPGPYTFILKATREVPK------ 109
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
++ ++ +GVRIP+ A+L + +PL+S+++ E +V+ I + E
Sbjct: 110 --MMQHPKKRTIGVRIPDHRTTLALLDAVGSPLVSSTLLLPDHPEPLVEGWTIKELLDHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
LD V+D G P+TVVD++G P+++R G G
Sbjct: 168 -LDAVLDSGDCGLTPTTVVDLSGDEPEVVRVGAG 200
>gi|262369302|ref|ZP_06062630.1| yrdC domain-containing protein [Acinetobacter johnsonii SH046]
gi|381198339|ref|ZP_09905678.1| yrdC domain protein [Acinetobacter lwoffii WJ10621]
gi|262315370|gb|EEY96409.1| yrdC domain-containing protein [Acinetobacter johnsonii SH046]
Length = 205
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + VE ++ G V V PTD YAI C + + +A+ER+ +I+ +
Sbjct: 2 LHLRVHPDNPQARSISQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGAK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIICADLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ +CQ +L+++ PL+++++ E + DP I +
Sbjct: 112 ------HPKKKTIGLRIPSNPVCQMLLKELGEPLLTSTLILPNQEEPLDDPYDI-EMQLS 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G+ +++VD++G +P++IR+G G
Sbjct: 165 KRIDVFIDSGLGTLSTTSIVDLSGDHPEVIRRGLG 199
>gi|347541055|ref|YP_004848481.1| Sua5/YciO/YrdC/YwlC family protein [Pseudogulbenkiania sp. NH8B]
gi|345644234|dbj|BAK78067.1| Sua5/YciO/YrdC/YwlC family protein [Pseudogulbenkiania sp. NH8B]
Length = 206
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 19/214 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V++L+ G V V PTD+ YA+ C L +A+ER+ I+ ++ L+++
Sbjct: 9 PDNPQARLIREAVKILRAGGVIVYPTDSCYALGCLLGDKAAMERILDIRQLDLKHHLTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ Y R D + FR +K PG YTFIL A+KEVP++ +
Sbjct: 69 CADLSELSNYA----RVDN----SQFRQLKAATPGSYTFILQATKEVPRRTL-------- 112
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
+ R +G+R+P + A+L ++ P++S ++ D+E + DP I + + +D V
Sbjct: 113 HPKRATIGLRVPEHPVALALLAELGEPILSCTLSLPGDSEALTDPYEIRERMERQ-VDLV 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG-PKLY 219
+DGG EP+TV+D+T +++R+GKG P L+
Sbjct: 172 IDGGWCGTEPTTVIDLTEGV-ELVRRGKGDPALF 204
>gi|384085528|ref|ZP_09996703.1| Sua5/YciO/YrdC/YwlC family protein [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 208
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 18/205 (8%)
Query: 12 SWKL-EPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSL 70
W+L EPV+++L+ G + V PTDT YA+ C + + +A ERLRRI+ ++ LS+L +
Sbjct: 13 QWRLLEPVLDVLRAGGLIVFPTDTCYALGCMVGARAAQERLRRIRQLDLQHDLSLLFPGI 72
Query: 71 RDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLR 130
+ Y R F ++ LPGPYTFIL A+K+VP++ +
Sbjct: 73 AQLAEYAKLDDRA--------FALLRKALPGPYTFILPATKDVPRRLADPK--------K 116
Query: 131 KHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGG 190
+ +GVRIP IC+ +L ++ PL+S++++ + + ++DP I G + +D V+
Sbjct: 117 RSIGVRIPAHPICEMLLAELGEPLMSSTLQLPESDIPLIDPEEICTLLGNQ-VDKVILAE 175
Query: 191 VRVAEPSTVVDMTGTYPKIIRQGKG 215
A+ STV+D+ P+++R+G G
Sbjct: 176 QGRAQCSTVIDLLQWPPQLLRKGAG 200
>gi|226943682|ref|YP_002798755.1| Sua5/YciO/YrdC/YwlC family protein [Azotobacter vinelandii DJ]
gi|226718609|gb|ACO77780.1| Sua5/YciO/YrdC/YwlC family protein [Azotobacter vinelandii DJ]
Length = 209
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P + VE+++ G V V PTD YA+ C L + + +ER+RR++ ++
Sbjct: 4 YFQIHPENPQLRLVRQAVEIVRGGGVIVYPTDASYALGCQLGNKAGLERIRRLRQLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + F R D FR +K PGPYTFIL AS+EVP+ +
Sbjct: 64 NFTLVCSDLSQLSL----FARVD----TGAFRLLKTWTPGPYTFILHASREVPRIML--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ R+ +G+RIP + I QA+L ++ PL+S S+ + + DP + +
Sbjct: 113 -----HPKRRTIGLRIPANPIAQALLAELGEPLMSASLILPGETLPLSDPEEMRRRLERQ 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +VDGG E STVV + P+++R G G
Sbjct: 168 -VDLIVDGGAGTLEASTVVSLLEGEPEVLRVGCG 200
>gi|390443364|ref|ZP_10231157.1| Sua5/YciO/YrdC/YwlC family protein [Nitritalea halalkaliphila LW7]
gi|389666865|gb|EIM78307.1| Sua5/YciO/YrdC/YwlC family protein [Nitritalea halalkaliphila LW7]
Length = 180
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 19/189 (10%)
Query: 29 VVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK-PLSILCRSLRDIDTYTTGFPRGDGQG 87
+ PTDT+Y + CD+ + A+ER+ ++K + P K S +C L +I YT
Sbjct: 3 IYPTDTVYGMGCDIHNQKAVERIAQLKGINPKKHHFSFICYDLSNIADYTRALS------ 56
Query: 88 HANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAIL 147
+F+ +K LPGPYTFIL A+ +VPK S +K VG+R+P+ +I + ++
Sbjct: 57 -TPVFKMMKKGLPGPYTFILEANNQVPKLL---------NSKKKTVGIRVPDHSIPRLLV 106
Query: 148 QKMDAPLISTSVKWLKDN-EWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTVVDMTGTY 206
+++ AP+++TS+ + E+ DP +I + Y +D V+DGG ST++D +G+
Sbjct: 107 KELGAPILTTSIHDEDEVIEYSTDPELIYEKY-QNLVDVVIDGGYGKNVASTIIDCSGSE 165
Query: 207 PKIIRQGKG 215
+++RQG G
Sbjct: 166 IEVLRQGLG 174
>gi|433607799|ref|YP_007040168.1| Translation factor SUA5 [Saccharothrix espanaensis DSM 44229]
gi|407885652|emb|CCH33295.1| Translation factor SUA5 [Saccharothrix espanaensis DSM 44229]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P ++ V+L+K + PTD+ YA+ C L + ++R+R+I++++
Sbjct: 4 YFDVHPVNPQRRTIDAAVQLIKSDGLIAYPTDSCYALGCQLGNKDGLDRIRQIRHLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+I+CR + + ++FRA+K PG YTFIL A++EVP++ +
Sbjct: 64 HFTIMCRDFAQLGQFV--------HVDNSVFRAIKAATPGSYTFILPATREVPRRLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VG RIP + QA+L ++ PL+S+++ E +V I +
Sbjct: 113 -----HPKKKTVGARIPEHVVAQALLAELGEPLVSSTLLLPDQAEPLVQGWEIKERLD-N 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G EP+TV+D + P+I+R+G G
Sbjct: 167 VVDAVLDSGECGTEPTTVIDFSDGEPEIVRRGAG 200
>gi|420151988|ref|ZP_14659064.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces massiliensis F0489]
gi|394765687|gb|EJF47053.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces massiliensis F0489]
Length = 205
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 19/215 (8%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y+E P + +E VV+ L+EG + PTD+ YA+ C + ++R+R I+ ++
Sbjct: 4 YIELHPVNPQARLVEKVVDKLREGGLIAYPTDSGYALACAPGNKEGLDRIRAIRQLDSKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+ +C S + G+ N FR +K PGP+TFIL +K+VP+ +
Sbjct: 64 NFTFVCASFAQVGPVAI---VGN-----NAFRLIKRLTPGPWTFILKGTKDVPRMTL--- 112
Query: 122 TTTAKYSLRKH-VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +KH +GVRIPN AI QA++ DAP++S+++ E + D G
Sbjct: 113 ------NPKKHTLGVRIPNHAITQALVAGFDAPILSSTLIRPGQTEPESSGWEVEDALG- 165
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V++G V E +TVVD+T P+++R+G G
Sbjct: 166 HLIDVVIEGPVTSTESTTVVDLTDDAPEVVREGAG 200
>gi|313667824|ref|YP_004048108.1| hypothetical protein NLA_4790 [Neisseria lactamica 020-06]
gi|313005286|emb|CBN86719.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 234
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VVE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 32 FFAIHPDNPQERLIRQVVEIVNKGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 91
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+VP + +
Sbjct: 92 HLTLMCADLSELGTYA---------AIDNVQFRQLKAATPGPYTFILQATKDVPARTL-- 140
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ RK +G+RIP +A+ QA+L+++ PL+S ++ +D E + DP I +
Sbjct: 141 ------HPKRKTIGLRIPGNAVAQALLEELGEPLLSCTLMLPEDGEPLTDPYEIRERL-E 193
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG +P+TV+DMT GT +++R+G G
Sbjct: 194 HAVDLVIDGGWCGTDPATVIDMTDGT--ELVRRGCG 227
>gi|343498119|ref|ZP_08736162.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio nigripulchritudo ATCC
27043]
gi|342814957|gb|EGU49887.1| Sua5/YciO/YrdC/YwlC family protein [Vibrio nigripulchritudo ATCC
27043]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V +++ G V V PTD+ YA+ C L++ A+ER+ RI+ ++ ++L
Sbjct: 9 PENPQARLITQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICRIRKLDDKHNFTLL 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
CR L ++ Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 69 CRDLSELSLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFV 186
S +K +G+R+P++ I +L+ + PL+STS+ + DP I D +D +
Sbjct: 114 -SKKKTIGIRVPDNIIALDLLEALGEPLMSTSLILPDSDVAESDPEEIRDRL-EHAVDAI 171
Query: 187 VDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++GG +P+TV+D + I R G G
Sbjct: 172 LNGGYLGEQPTTVIDFSEDEAVIARVGAG 200
>gi|260582127|ref|ZP_05849921.1| SUA5 protein [Haemophilus influenzae NT127]
gi|260094759|gb|EEW78653.1| SUA5 protein [Haemophilus influenzae NT127]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 18/210 (8%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + VE+L++G V V PTD+ YA+ C + A++R+ I+ + +++
Sbjct: 9 PENPQARLINQAVEILQKGGVIVYPTDSGYALGCMMGDKHAMDRIVAIRKLTEGHNFTLV 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAK 126
C L ++ TY T + +R +K+ PG YTFILTA+KE+P++ +
Sbjct: 69 CSDLSELSTYAT--------VNNTAYRLIKNNTPGRYTFILTATKELPRRLMT------- 113
Query: 127 YSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKW-LKDNEWMVDPVVIADTYGPEGLDF 185
S RK +G+R+P++ I +L + P++S S+ +++ DP I D + +D
Sbjct: 114 -SKRKTIGLRVPDNKIALDLLSALGEPILSCSLMLPNEEHTTQSDPEEIRDRLEHQ-VDL 171
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG EP+TVVD+T P I+R+G G
Sbjct: 172 IIHGGYLGQEPTTVVDLTEESPVILREGSG 201
>gi|425736073|ref|ZP_18854382.1| translation factor SUA5 [Brevibacterium casei S18]
gi|425478755|gb|EKU45941.1| translation factor SUA5 [Brevibacterium casei S18]
Length = 208
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 110/204 (53%), Gaps = 17/204 (8%)
Query: 20 ELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTG 79
E+L++G + PTD+ YA+ C L++ + IER+ RI++++ +++C + +
Sbjct: 22 EVLRDGGLIAYPTDSCYALGCALENKAGIERITRIRHLDSKHHFTLMCHDFAQLGQFVI- 80
Query: 80 FPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPN 139
D FRA+K PGPYTFI+ A+KEVP++ + + + VG RIP
Sbjct: 81 VDNSD-------FRAIKSMTPGPYTFIMKATKEVPRRMM--------HPKKHSVGARIPQ 125
Query: 140 DAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVRVAEPSTV 199
+ A+++ M P++S+++ D + + + + D G + +D V++ G P++V
Sbjct: 126 NTTALALVEAMGEPILSSTLLLPGDEDPLTEADDVMDQIGHD-VDVVIESGTPGVVPTSV 184
Query: 200 VDMTGTYPKIIRQGKGPKLYWMEE 223
+D TG YP++ R G G + EE
Sbjct: 185 IDFTGRYPEVARVGAGDVSRFDEE 208
>gi|297571292|ref|YP_003697066.1| Sua5/YciO/YrdC/YwlC family protein [Arcanobacterium haemolyticum
DSM 20595]
gi|296931639|gb|ADH92447.1| Sua5/YciO/YrdC/YwlC family protein [Arcanobacterium haemolyticum
DSM 20595]
Length = 208
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
YV+ P ++ VV+ L+ G V +PTD+ YAI C + + +ER+RRI+ V
Sbjct: 4 YVDIHPEDPQQRLVDKVVDRLRRGEVIAMPTDSGYAICCMMANKDGLERIRRIRQVGDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LC + +FR VK PGPYTFIL +KEVP+ +
Sbjct: 64 HFTLLCHDFAQLGQLVI--------VDNAVFRLVKSLTPGPYTFILKGTKEVPRMTLNPK 115
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
T VGVRIP+ I QAI+ + PL+S+++ ++E M IAD
Sbjct: 116 KAT--------VGVRIPDHKITQAIVNTLGEPLLSSTLIMPGESEPMSQGWEIADLL-TN 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D VV+G V V P+TV+DM+ I R G G
Sbjct: 167 AVDVVVEGPVGVDGPTTVLDMSDGNVTIARVGAG 200
>gi|74317545|ref|YP_315285.1| translation factor Sua5 [Thiobacillus denitrificans ATCC 25259]
gi|74057040|gb|AAZ97480.1| putative translation factor Sua5 [Thiobacillus denitrificans ATCC
25259]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 15 LEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDID 74
++ V++LK G V V PTD+ YA+ C + A RL ++ ++ L+++CR L ++
Sbjct: 17 IQQTVDILKRGGVIVYPTDSCYALGCHIGDKEAAMRLLSVRGLDTGHDLTLVCRDLSELG 76
Query: 75 TYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKH-- 132
Y Q FR +K PGPYTFIL ++EVP++ + ++H
Sbjct: 77 RY--------AQVDNAQFRLLKAHTPGPYTFILRGTREVPRRLLH----------KRHDT 118
Query: 133 VGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDFVVDGGVR 192
+G+R+P + QA+L+ + P++S+++ ++ + +P I + + +D V+DGG
Sbjct: 119 IGLRVPAHPLVQALLEGLGEPILSSTLLLYGEDVPLTEPWEIRERLEHQ-VDLVIDGGAC 177
Query: 193 VAEPSTVVDMTGTYPKIIRQGKG 215
P+TVVD+T P ++R GKG
Sbjct: 178 GLTPTTVVDLTAETPAVVRYGKG 200
>gi|395650863|ref|ZP_10438713.1| hypothetical protein Pext1s1_19889 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 209
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P ++ VE+++ G V + PTD+ YAI C + SA+ER+RR++ ++
Sbjct: 4 FFQIHPENPQPRLIKQAVEIIRAGGVVIYPTDSSYAIGCQIGDKSAVERVRRLRQLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K PGPYTFIL A++EVP+ +
Sbjct: 64 NFALICSDLSQLGLFA--------KVDTGTFRLLKAHTPGPYTFILNATREVPRLLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P I A+L ++ PL+S S+ E + DP + +
Sbjct: 113 -----HPKKRTIGLRVPEHPIALALLAELGEPLMSVSLIMPGATEPLEDPSEMRQLL-EK 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+++ P++IR G G +M E
Sbjct: 167 HVDLIIDGGFGGGKASTVINLADGKPEVIRVGCGDPAPFMAE 208
>gi|325955237|ref|YP_004238897.1| Sua5/YciO/YrdC/YwlC family protein [Weeksella virosa DSM 16922]
gi|323437855|gb|ADX68319.1| Sua5/YciO/YrdC/YwlC family protein [Weeksella virosa DSM 16922]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 3 VEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKP 62
+ P ++ VVE+LK+G + + P+DT+Y + CD+ ++ A+E L R+K V+ K
Sbjct: 5 IRIHPDNPQEKAIDQVVEVLKQGGLIIYPSDTVYGLGCDITNYKAMENLARLKGVKLDKS 64
Query: 63 -LSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
SI+C L + +T + F+ +K LPGP+TF+L AS +P
Sbjct: 65 QFSIVCNDLSHLSNFTRPISN-------STFKVLKRALPGPFTFVLQASGNLP------- 110
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDN--EWMVDPVVIADTYG 179
Y +K VG+R+P+ + + I++K+ P+ STS+ + +D E+ DP +IA+ +
Sbjct: 111 ---LAYKGKKTVGIRVPDHLVPRRIVEKLGNPIASTSI-YDEDEILEYTTDPELIAEKWD 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D V+D G S+++D T I+R+GKG
Sbjct: 167 -KLVDVVIDSGYGDNVASSIIDATENEMVILREGKG 201
>gi|411005292|ref|ZP_11381621.1| hypothetical protein SgloC_20956 [Streptomyces globisporus C-1027]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
Y + P+ + VV+ ++ GA+ PTD+ YA+ C L + AI+R++ I+N++
Sbjct: 4 YFDVHPANPQPRTIGTVVDSIRSGALVAYPTDSCYALGCQLGNRDAIDRIKSIRNLDDRH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C + F R D ++FRAVK PG YTFIL A+KEVP++ +
Sbjct: 64 HFTLVCHDFAQL----AQFVRVDN----DVFRAVKAATPGSYTFILPATKEVPRQLL--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ +K VGVRIP+ + QA++ ++ PL+S+++ + E + I + E
Sbjct: 113 -----HPKKKTVGVRIPDHVVTQALVSELGEPLLSSTLLLPDEEEPLTQGWEIKERLDHE 167
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D V+D G EP+TV+D +G P+I+R G G
Sbjct: 168 -VDAVIDSGDCGTEPTTVIDFSGDEPEIVRHGAG 200
>gi|387888920|ref|YP_006319218.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia blattae DSM 4481]
gi|414594731|ref|ZP_11444365.1| hypothetical protein YciO [Escherichia blattae NBRC 105725]
gi|386923753|gb|AFJ46707.1| Sua5/YciO/YrdC/YwlC family protein [Escherichia blattae DSM 4481]
gi|403194233|dbj|GAB82017.1| hypothetical protein YciO [Escherichia blattae NBRC 105725]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 113/210 (53%), Gaps = 19/210 (9%)
Query: 7 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSIL 66
P + + V+++++G V V PTD+ YA+ C L+ +A+ER+ RI+ + +++
Sbjct: 9 PENPQARLINQAVDIIRKGGVIVYPTDSGYALGCKLEDKNAMERICRIRQLPDGHNFTLM 68
Query: 67 CRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTA 125
CR L ++ TY N+ FR +K+ PG YTFIL +KEVP++ ++
Sbjct: 69 CRDLSELSTYAW---------VDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQ------ 113
Query: 126 KYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPEGLDF 185
RK +G+R+P++ I +L + P++STS+ DP I D + +D
Sbjct: 114 --DKRKTIGLRVPSNPIALDLLGALGEPMLSTSLMLPGSEFTESDPDEIKDRLEKQ-VDL 170
Query: 186 VVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
++ GG +P+TV+D+T P ++R+G G
Sbjct: 171 IIHGGYLGQQPTTVIDLTEDSPVVLREGVG 200
>gi|365967714|ref|YP_004949276.1| SUA5 protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|416082477|ref|ZP_11586601.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|444347840|ref|ZP_21155642.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|348010837|gb|EGY50851.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|365746627|gb|AEW77532.1| SUA5 protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443548071|gb|ELT57422.1| SUA5 protein [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 20/216 (9%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + VE+L+ G V V PTD+ YA+ C + A++R+ I+ +
Sbjct: 4 FFYIHPENPQVRLINQAVEILRNGGVVVYPTDSGYALGCMIGDKHAMDRIVHIRQLPEGH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L ++ TY+ + +R +K+ PG YTFILTA+KE+P++ +
Sbjct: 64 NFTLVCSDLSELSTYSLVT--------NSAYRLIKNNTPGRYTFILTATKELPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVD--PVVIADTYG 179
T+K RK +G+R+P++ I +L+ + P++S S+ L + E + P I D
Sbjct: 113 --TSK---RKTIGIRVPDNQIALDLLKALGEPILSCSL-MLPNEEHLTQSGPEEIRDRLE 166
Query: 180 PEGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D ++ GG EP+TVVD+TG P I+R+G G
Sbjct: 167 HQ-VDLIIHGGYLGQEPTTVVDLTGDTPVILREGSG 201
>gi|343508476|ref|ZP_08745818.1| hypothetical protein VII00023_09209 [Vibrio ichthyoenteri ATCC
700023]
gi|342793790|gb|EGU29578.1| hypothetical protein VII00023_09209 [Vibrio ichthyoenteri ATCC
700023]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ A+ER+ +I+ +
Sbjct: 4 FFYVHPENPQARLISQAVAIIRNGGVVVYPTDSGYALGCQLENKQALERICQIRRLNDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEIALYA----RVDNVA----FRLLKNNTPGPYTFIFKGTKEVPRRLM--- 112
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
AK RK +G+R+P++ I +L+ + P++STS+ + DP I D
Sbjct: 113 --NAK---RKTIGIRVPDNRIALDLLEALGEPMMSTSLILPGNEVTESDPEDIRDKL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + +++R G G
Sbjct: 167 AVDVILNGGYLGEQPTTVIDFSEGEAELVRLGAG 200
>gi|398872880|ref|ZP_10628156.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM74]
gi|398920764|ref|ZP_10659489.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM49]
gi|398167505|gb|EJM55566.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM49]
gi|398201406|gb|EJM88286.1| Sua5/YciO/YrdC/YwlC family protein [Pseudomonas sp. GM74]
Length = 222
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ + P + ++ VE++++G V + PTD+ YAI C + A+ER+RR++ ++
Sbjct: 17 FFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKVAVERVRRLRQLDEKH 76
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
+++C L + + + FR +K LPGPYTFIL A++EVP+ +
Sbjct: 77 NFALICSDLSQLGLF--------AKIDTGTFRILKAHLPGPYTFILNATREVPRLLL--- 125
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
+ ++ +G+R+P+ I A+L ++ PL+S ++ D + + DP + +
Sbjct: 126 -----HPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPHEMRQLLEHQ 180
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKGPKLYWMEE 223
+D ++DGG + STV+ + P++IR G G +M E
Sbjct: 181 -VDLIIDGGFGGIKASTVISLADGEPEVIRVGCGDPAPFMVE 221
>gi|294649549|ref|ZP_06726969.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824536|gb|EFF83319.1| Sua5/YciO/YrdC/YwlC family protein [Acinetobacter haemolyticus ATCC
19194]
Length = 205
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MYVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPS 60
+++ P + + V+ ++ G V V PTD YAI C + + SA+ER+ +I+ + P
Sbjct: 2 LHLHIHPENPQARLITQAVDRIRAGDVVVYPTDAAYAIGCQIGNKSAMERIAQIRGLGPK 61
Query: 61 KPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRY 120
+I+C L DI TY + ++R +K+ P TFIL A+ EVPK+ +
Sbjct: 62 HQYAIMCCDLSDIATY--------AKVDNAMYRLLKNNTPAVTTFILPATSEVPKRLM-- 111
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
+ +K +G+RIP++ + QA+L+++ PL+++++ + + DP I G
Sbjct: 112 ------HPKKKTIGLRIPSNPVAQALLKELGEPLLTSTLILPDQKDPLDDPYDIESQLG- 164
Query: 181 EGLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+ +D +D G +++VD++G P+IIR+G G
Sbjct: 165 KRIDVFIDSGFGTLSTTSIVDLSGENPEIIRRGVG 199
>gi|261210663|ref|ZP_05924955.1| YrdC family protein [Vibrio sp. RC341]
gi|262402465|ref|ZP_06079026.1| YrdC family protein [Vibrio sp. RC586]
gi|260840148|gb|EEX66728.1| YrdC family protein [Vibrio sp. RC341]
gi|262351247|gb|EEZ00380.1| YrdC family protein [Vibrio sp. RC586]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 17/214 (7%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P + + V +++ G V V PTD+ YA+ C L++ +ER+ +I+ ++
Sbjct: 4 FFYVHPENPQTRLINQAVAIIRNGGVVVYPTDSGYAVGCQLENKHGMERICQIRRLDDKH 63
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYG 121
++LCR L +I Y R D FR +K+ PGPYTFI +KEVP++ +
Sbjct: 64 NFTLLCRDLSEISLYA----RVDNTA----FRLLKNNTPGPYTFIFKGTKEVPRRLMN-- 113
Query: 122 TTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGPE 181
RK +G+R+P++ I +L+ + PL+STS+ ++ DP I D+
Sbjct: 114 ------EKRKTIGIRVPDNKIALDLLEALGEPLMSTSLILPGNDFTESDPEAIRDSL-EH 166
Query: 182 GLDFVVDGGVRVAEPSTVVDMTGTYPKIIRQGKG 215
+D +++GG +P+TV+D + + R G G
Sbjct: 167 AVDVILNGGYLGQQPTTVIDFSDDEIVVARVGAG 200
>gi|59801858|ref|YP_208570.1| hypothetical protein NGO1520 [Neisseria gonorrhoeae FA 1090]
gi|194099331|ref|YP_002002431.1| hypothetical protein NGK_1806 [Neisseria gonorrhoeae NCCP11945]
gi|254494302|ref|ZP_05107473.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268595399|ref|ZP_06129566.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268599438|ref|ZP_06133605.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268601955|ref|ZP_06136122.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268604284|ref|ZP_06138451.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682743|ref|ZP_06149605.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268684847|ref|ZP_06151709.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268687170|ref|ZP_06154032.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291043170|ref|ZP_06568893.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293398503|ref|ZP_06642681.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria gonorrhoeae F62]
gi|385336294|ref|YP_005890241.1| hypothetical protein NGTW08_1416 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|59718753|gb|AAW90158.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|193934621|gb|ACF30445.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
gi|226513342|gb|EEH62687.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268548788|gb|EEZ44206.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268583569|gb|EEZ48245.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268586086|gb|EEZ50762.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588415|gb|EEZ53091.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268623027|gb|EEZ55427.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268625131|gb|EEZ57531.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268627454|gb|EEZ59854.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291012776|gb|EFE04759.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291610974|gb|EFF40071.1| Sua5/YciO/YrdC/YwlC family protein [Neisseria gonorrhoeae F62]
gi|317164837|gb|ADV08378.1| hypothetical protein NGTW08_1416 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 234
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 2 YVEADPSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSK 61
+ P ++ VE++ +G V V PTD+ YA+ C L +A+ER+ I+ ++
Sbjct: 32 FFAVHPDNPQERLIKQAVEIINQGGVVVYPTDSCYALGCKLGDKAAMERILSIRKIDLKH 91
Query: 62 PLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRY 120
L+++C L ++ TY N+ FR +K PGPYTFIL A+K+ P +
Sbjct: 92 HLTLMCADLSELGTYAK---------IDNVQFRQLKAATPGPYTFILQATKDAPAR---- 138
Query: 121 GTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIADTYGP 180
A + RK +G+RIP++A+ QA+L+++ PL+S ++ +D E + DP I +
Sbjct: 139 ----ALHPKRKTIGLRIPDNAVAQALLEELGGPLLSCTLMLPEDGEPLTDPYEIRERL-E 193
Query: 181 EGLDFVVDGGVRVAEPSTVVDMT-GTYPKIIRQGKG 215
+D V+DGG +P+TV+DMT GT +++R+G G
Sbjct: 194 HAVDLVIDGGWCGTDPTTVIDMTDGT--ELVRRGFG 227
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,167,986,358
Number of Sequences: 23463169
Number of extensions: 177526375
Number of successful extensions: 363972
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 3177
Number of HSP's that attempted gapping in prelim test: 353459
Number of HSP's gapped (non-prelim): 5575
length of query: 239
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 101
effective length of database: 9,121,278,045
effective search space: 921249082545
effective search space used: 921249082545
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)