BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026382
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta OS=Malus
domestica PE=2 SV=2
Length = 271
Score = 329 bits (843), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/222 (77%), Positives = 192/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTDENQVDVKDEV-AELAPFDPTKKKKKKKVVIQDPSDDSVDKLAEKTETLSVSEGLEST 59
M D+NQ +VKDEV A++APFDPTKKKKKK+VVIQD +DDSV KLAEK E + SEG EST
Sbjct: 1 MADDNQNEVKDEVVADIAPFDPTKKKKKKEVVIQDTTDDSVGKLAEKAEACTASEGQEST 60
Query: 60 FTGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYE 119
F GLKKKKKKP+E+S+LN+E GDA +DL+ GED+E +G YPWEGSDRDY YE
Sbjct: 61 FAGLKKKKKKPIETSILNEESGDAVEDLNERTGEDEEGEGIVLETPSYPWEGSDRDYTYE 120
Query: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMT 179
ELL RVF ILRENNP+LAGDRRRTVMRPPQVLREGTKK VFVNFMDLCKTMHRQPDHVM
Sbjct: 121 ELLDRVFTILRENNPDLAGDRRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPDHVMA 180
Query: 180 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYV++Y +
Sbjct: 181 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVI 222
>sp|O24473|IF2B_WHEAT Eukaryotic translation initiation factor 2 subunit beta OS=Triticum
aestivum PE=1 SV=1
Length = 270
Score = 308 bits (789), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 1 MTDENQVDVKDEVAELAPFDPTKKKKKKKVVIQDPSDDSVDKLAEKTETLSVSEGLESTF 60
M DE Q++ K+E E+APFDPTKKKKKKKVVIQDP+D+ VDKLAEKTE LSV+E E++F
Sbjct: 1 MADEEQMERKEEATEIAPFDPTKKKKKKKVVIQDPADE-VDKLAEKTEGLSVTESGEASF 59
Query: 61 TGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGS--GGPRQRYPWEGSDRDYEY 118
GLKKKKKK VE E GD D LD VGED++ +G GG Q YPWEG+DRDY+Y
Sbjct: 60 VGLKKKKKKLVELDPSLVEAGDGEDTLDDQVGEDEQGEGIVLGGATQ-YPWEGTDRDYKY 118
Query: 119 EELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM 178
+ELLGRVFNILRENNP+LAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM
Sbjct: 119 DELLGRVFNILRENNPDLAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVM 178
Query: 179 TFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
FLLAE+GTSGSLDGQQRLV+KGRFAPKNFE ILRRY+++Y +
Sbjct: 179 MFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYINEYVI 221
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2 subunit beta
OS=Arabidopsis thaliana GN=EMB1401 PE=2 SV=3
Length = 268
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/222 (72%), Positives = 190/222 (85%), Gaps = 2/222 (0%)
Query: 1 MTDENQVDVKDEVAELAPFDPTKKKKKKKVVIQDPSDDSVDK-LAEKTETLSVSEGLEST 59
M DE ++++E +LAPFDP+KKKKKKKVVIQ+P +D + EK+++L V++GLES+
Sbjct: 1 MADEIN-EIREEQEQLAPFDPSKKKKKKKVVIQEPVEDLAESSQTEKSDSLPVNDGLESS 59
Query: 60 FTGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYE 119
FTG+KKKKKKP ESSLLN+E DAG+DLD ++ E + +QRYPWEGS+RDY Y+
Sbjct: 60 FTGMKKKKKKPTESSLLNNESVDAGEDLDEIANDEQEGEEGIVLQQRYPWEGSERDYIYD 119
Query: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMT 179
ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM
Sbjct: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMQ 179
Query: 180 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY++ Y +
Sbjct: 180 YLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYITDYVI 221
>sp|Q99L45|IF2B_MOUSE Eukaryotic translation initiation factor 2 subunit 2 OS=Mus
musculus GN=Eif2s2 PE=1 SV=1
Length = 331
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 93 EDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVL 151
ED + D + W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+
Sbjct: 149 EDSKKDDGISFSSQTAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVV 208
Query: 152 REGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGI 211
R GTKKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +
Sbjct: 209 RVGTKKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENV 268
Query: 212 LRRYVSKY 219
LRRY+ +Y
Sbjct: 269 LRRYIKEY 276
>sp|Q5R4T9|IF2B_PONAB Eukaryotic translation initiation factor 2 subunit 2 OS=Pongo
abelii GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VSKY 219
+ +Y
Sbjct: 275 IKEY 278
>sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo
sapiens GN=EIF2S2 PE=1 SV=2
Length = 333
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VSKY 219
+ +Y
Sbjct: 275 IKEY 278
>sp|P41035|IF2B_RABIT Eukaryotic translation initiation factor 2 subunit 2 OS=Oryctolagus
cuniculus GN=EIF2S2 PE=1 SV=1
Length = 333
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VSKY 219
+ +Y
Sbjct: 275 IKEY 278
>sp|Q5E9D0|IF2B_BOVIN Eukaryotic translation initiation factor 2 subunit 2 OS=Bos taurus
GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VSKY 219
+ +Y
Sbjct: 275 IKEY 278
>sp|P41375|IF2B_DROME Eukaryotic translation initiation factor 2 subunit 2 OS=Drosophila
melanogaster GN=eIF-2beta PE=1 SV=1
Length = 312
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Query: 76 LNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPE 135
L++ D DD E+DE + S W GSDRDY Y+ELL RVF I+ + NP+
Sbjct: 120 LDELFADQADDDKSEDKENDEDNSS-------TWFGSDRDYTYDELLKRVFEIILDKNPD 172
Query: 136 LAGDRR-RTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQ 194
+A R+ + VMRPPQVLR GTKKT F NFMD+ KT+HR P H++ FLLAELGTSGS+DG
Sbjct: 173 MAAGRKPKFVMRPPQVLRVGTKKTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGN 232
Query: 195 QRLVVKGRFAPKNFEGILRRYVSKY 219
Q+L++KGRF PK E +LRRY+ +Y
Sbjct: 233 QQLIIKGRFQPKQIENVLRRYIKEY 257
>sp|Q54T27|IF2B_DICDI Eukaryotic translation initiation factor 2 subunit 2
OS=Dictyostelium discoideum GN=eif2s2 PE=3 SV=1
Length = 317
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Query: 97 ADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTK 156
+DG + PW G+DRDY+Y EL R++++L+ NNP+L D++RT M+PPQV+REGTK
Sbjct: 144 SDGDTFVQGTIPWAGTDRDYKYSELTYRIYHLLQANNPDLISDQKRT-MKPPQVMREGTK 202
Query: 157 KTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYV 216
KT++ NF ++C T++R+ +HV ++ AELGT+GS+DG QRLV++GRF E ++R Y+
Sbjct: 203 KTIWANFAEICGTLNRKVEHVYNYVFAELGTNGSIDGNQRLVIRGRFKTSQIEIVIRHYI 262
Query: 217 SKY 219
S+Y
Sbjct: 263 SEY 265
>sp|P56329|IF2B_SCHPO Probable eukaryotic translation initiation factor 2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif212 PE=1 SV=2
Length = 321
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 91/148 (61%), Gaps = 8/148 (5%)
Query: 72 ESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRE 131
E L GDA DL D E G + W SDRDY Y ELL R F +LR
Sbjct: 131 EKELEASSTGDATSDLSKQTF-DSENMG------EHAWLKSDRDYYYPELLNRFFTLLRT 183
Query: 132 NNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSL 191
NNPELAG++R+ + PP V REG KKT+F N D+ K MHR DHV+ FL AELGTSGS+
Sbjct: 184 NNPELAGEKRKYTIVPPSVHREG-KKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSV 242
Query: 192 DGQQRLVVKGRFAPKNFEGILRRYVSKY 219
DG RL++KGRF K E +LRRY+ +Y
Sbjct: 243 DGSSRLIIKGRFQQKQIENVLRRYIVEY 270
>sp|Q21230|IF2B_CAEEL Eukaryotic translation initiation factor 2 subunit 2
OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4
Length = 250
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 84/120 (70%)
Query: 102 GPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFV 161
G + +G+ DY YEE L V+ ++++ NP+ AGD+++ ++ P+V R G+KKT F
Sbjct: 73 GAQNLIDAKGAWPDYTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFS 132
Query: 162 NFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
NF+++C+ M RQ HV+ FLLAELGT+GS+DG L+VKGR+ K FE +LR+Y+ +Y +
Sbjct: 133 NFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVM 192
>sp|P09064|IF2B_YEAST Eukaryotic translation initiation factor 2 subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUI3 PE=1 SV=2
Length = 285
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 127/242 (52%), Gaps = 45/242 (18%)
Query: 11 DEVAELAPFDPTK-KKKKKKVVIQDPSDDSV---------------------------DK 42
D AEL FDP KKKK K VI D D +V D
Sbjct: 4 DLAAELG-FDPALKKKKKTKKVIPDDFDAAVNGKENGSGDDLFAGLKKKKKKSKSVSADA 62
Query: 43 LAEKTETLSVSEGLESTFTGLKKKKKKPVESSL--LNDEIGDAG-DDLDGHVGEDDEADG 99
AEK T ++E L LKKKKKK +SS+ E+ AG D++D E
Sbjct: 63 EAEKEPTDDIAEALGE--LSLKKKKKKTKDSSVDAFEKELAKAGLDNVDAESKE------ 114
Query: 100 SGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMR--PPQVLREGTKK 157
G P + + Y ELL R FNILR NNPELAGDR R PP LR+G KK
Sbjct: 115 -GTPSANSSIQ-QEVGLPYSELLSRFFNILRTNNPELAGDRSGPKFRIPPPVCLRDG-KK 171
Query: 158 TVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVS 217
T+F N D+ + +HR P+H++ +L AELGTSGS+DGQ+RLV+KG+F K E +LRRY+
Sbjct: 172 TIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYIL 231
Query: 218 KY 219
+Y
Sbjct: 232 EY 233
>sp|Q8TWR5|IF2B_METKA Translation initiation factor 2 subunit beta OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2b PE=3 SV=1
Length = 138
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 115 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP 174
+Y+YEELL R + E PE + RR M P+V EG K TV NF ++ K + R P
Sbjct: 3 EYDYEELLERAY----EQLPEEVLEDRRFEMPKPKVSVEG-KTTVIRNFKEISKKLDRDP 57
Query: 175 DHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+H+ + L ELGT+G +DG RL++ G + PK E L+ YV ++ L
Sbjct: 58 EHITKYFLKELGTAGHVDG-GRLILHGVYHPKLVEEELKNYVEEFVL 103
>sp|Q8PWV1|IF2B_METMA Translation initiation factor 2 subunit beta OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eif2b PE=3 SV=1
Length = 202
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YEELL R + + P+ R V+ P++ EG K T+ NF ++ T++R PD
Sbjct: 2 YDYEELLNRAMSKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPD 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKS 223
H+M +L ELGT+G ++G R V +GRF ++ YV +Y + S
Sbjct: 57 HLMKYLTRELGTAGKIEG-TRAVFQGRFTRAQLSDNIQAYVDEYVMCS 103
>sp|C5A2A8|IF2B_THEGJ Translation initiation factor 2 subunit beta OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2b PE=3 SV=1
Length = 142
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y++E LL + + E PE + PP V+ +T+ NF+D+ + M+R P
Sbjct: 8 YDFERLLDKAY----EELPENVKSHKSRFEVPPAVVTIAGNRTIIENFVDIAEAMNRDPS 63
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
H++ F+L E+ T+G+L+G +R++++GRF P L++Y+ +Y +
Sbjct: 64 HLLKFILREVATAGTLEG-RRVILQGRFTPYLIANKLKKYLKEYVI 108
>sp|Q8TU91|IF2B_METAC Translation initiation factor 2 subunit beta OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=eif2b PE=3 SV=1
Length = 202
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YEELL R + P+ R V+ P++ EG K T+ NF ++ T++R PD
Sbjct: 2 YDYEELLNRAMAKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPD 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKS 223
H+M +L ELGT+G ++G R V +GRF ++ YV +Y + S
Sbjct: 57 HLMKYLTRELGTAGKIEG-TRAVFQGRFTRAQISDNIQAYVDEYVMCS 103
>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif2b
PE=3 SV=1
Length = 204
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE++L ++ + E P G+R VM ++ EG K TV NF D+ +++R DH
Sbjct: 5 YEDMLKAAYSGIGE--PTETGER--FVMPKAKIYIEG-KTTVLENFSDIVDSLNRDKDHF 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKS 223
M F+L ELGT+G +DG R V G+F F+ IL YV Y + S
Sbjct: 60 MKFILGELGTAGKIDG-NRAVFNGKFEQAQFDAILETYVGDYVICS 104
>sp|Q5V323|IF2B_HALMA Translation initiation factor 2 subunit beta OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=eif2b PE=3 SV=1
Length = 134
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY+++L R E PE+ G R + P + +EG TV+ NF C + R+ DH
Sbjct: 2 EYDDMLDRAM----EETPEIDGTSERFEVPDPDIRQEG-NVTVYENFQSTCSRLGREDDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKSSFVL 227
VM FL +LGTSG +D R+ + G F E + YV ++ L S L
Sbjct: 57 VMKFLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGL 107
>sp|O58312|IF2B_PYRHO Translation initiation factor 2 subunit beta OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2b PE=3 SV=1
Length = 140
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P
Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
H++ FLL E+ T+G+L+G +R+V++GRF P L++Y+ +Y +
Sbjct: 62 HLLKFLLREIATAGTLEG-KRVVLQGRFTPYLIANKLKKYIKEYVI 106
>sp|Q9UYR6|IF2B_PYRAB Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2b PE=3 SV=1
Length = 140
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P
Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
H++ FLL E+ T+G+L+G +R+V++GRF P +++Y+ +Y +
Sbjct: 62 HLLKFLLREIATAGTLEG-KRVVLQGRFTPYLIANKIKKYIKEYVI 106
>sp|Q8U3I5|IF2B_PYRFU Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif2b
PE=1 SV=1
Length = 140
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ ++R P
Sbjct: 6 YDYEKLLEKAYQELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIADALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
H++ FLL E+ T+G+L+G +R+V++GRF P L++Y+ +Y +
Sbjct: 62 HLLKFLLREIATAGTLEG-RRVVLQGRFTPYLIANKLKKYIKEYVI 106
>sp|Q5JIT0|IF2B_PYRKO Translation initiation factor 2 subunit beta OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2b PE=3 SV=1
Length = 142
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y++E+LL + + L EN + R + P QV G + T+ NF+D+ + M+R P+
Sbjct: 8 YDFEKLLDKAYEELPEN---VKHHHSRFEVPPAQVTIAGNR-TIIENFVDIAEAMNRDPN 63
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
H++ F+L E+ T+G+L+G +R +++GRF P +++Y+ ++ +
Sbjct: 64 HLLKFILREVATAGTLEG-RRAILQGRFTPYLIANKMKKYLKEFVI 108
>sp|A0B5K5|IF2B_METTP Translation initiation factor 2 subunit beta OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=eif2b PE=3 SV=1
Length = 208
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 134 PELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDG 193
P G + R + P++ EG K TV NF + ++R PDH+M FLL ELGT+G ++G
Sbjct: 16 PAAKGTKERFQIPVPRIFYEG-KTTVLDNFAAIADALNRDPDHLMKFLLQELGTAGKIEG 74
Query: 194 QQRLVVKGRFAPKNFEGILRRYVSKYFLKSSFVL 227
R V +G+F + + + YV +Y + S L
Sbjct: 75 -HRGVFQGKFTEQAIQNQIAAYVDEYVICSECKL 107
>sp|A7I5J0|IF2B_METB6 Translation initiation factor 2 subunit beta OS=Methanoregula
boonei (strain 6A8) GN=eif2b PE=3 SV=1
Length = 204
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE LL + ++ + E + R V+ + EG K T+ NF ++ T+ R DH+
Sbjct: 5 YENLLKKAYSHISEK----SASSERFVVPEAKAYVEG-KTTILENFAEIADTVRRDKDHL 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKS 223
M ++L ELGTSG ++G R + G+F I++ YV Y + S
Sbjct: 60 MKYMLGELGTSGKIEG-NRAIFNGKFEISQIRMIIKSYVDDYVICS 104
>sp|Q3INQ4|IF2B_NATPD Translation initiation factor 2 subunit beta OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=eif2b PE=3
SV=1
Length = 134
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YEE L R E P++ G R + P V +EG TV+ NF + R+ HV
Sbjct: 3 YEEQLDRAL----EETPDIEGTAARFSVPDPDVRQEG-NATVYENFQPTIDRLDREESHV 57
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
M FL ELGTS ++D + RL + G F E + YV Y +
Sbjct: 58 MKFLQNELGTSANIDERGRLRLTGEFRQARVEEAINDYVEGYVI 101
>sp|Q9HQ97|IF2B_HALSA Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=eif2b PE=3 SV=1
Length = 132
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YEE L R + P++ G R + P V +EG TV+ NF + R DH
Sbjct: 2 DYEEQLDRAMD----EKPDVTGSETRFEVPDPNVRKEG-NVTVYENFQATLDALSRTQDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
V+ FL E+GTS S+D R + G F + L YV Y
Sbjct: 57 VLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETY 99
>sp|B0R583|IF2B_HALS3 Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif2b
PE=3 SV=1
Length = 132
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YEE L R + P++ G R + P V +EG TV+ NF + R DH
Sbjct: 2 DYEEQLDRAMD----EKPDVTGSETRFEVPDPNVRKEG-NVTVYENFQATLDALSRTQDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
V+ FL E+GTS S+D R + G F + L YV Y
Sbjct: 57 VLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETY 99
>sp|A3CXJ3|IF2B_METMJ Translation initiation factor 2 subunit beta OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif2b
PE=3 SV=1
Length = 205
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE+LL + + + E P DR + + EG K TV NF ++ T+ R+ DH+
Sbjct: 5 YEDLLKKAYTNITE--PTEFEDR--FTVPTARAFIEG-KTTVLENFAEIASTLRREQDHL 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKS 223
M LL ELGT+G ++G R V G+F + I++ YV Y + S
Sbjct: 60 MKHLLGELGTAGKVEG-TRAVFSGKFEQEQINTIIKGYVDDYVICS 104
>sp|A5UKI8|IF2B_METS3 Translation initiation factor 2 subunit beta OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=eif2b PE=3
SV=1
Length = 135
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFV-NFMDLCKTMHRQPD 175
EYE LL R + L PE+ +R + P+ + F+ NF D+ + ++R P
Sbjct: 3 EYENLLNRAIDQL---PPEVFEHKRFKI---PKAYSDIQGNRTFIKNFKDVAEDLNRDPQ 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
HV+ FLL ELGT+G+L+G R +++G+F L YV KY +
Sbjct: 57 HVLKFLLRELGTAGNLEG-SRAILQGKFTHYLINERLEDYVEKYVI 101
>sp|Q2NHD9|IF2B_METST Translation initiation factor 2 subunit beta OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1
Length = 142
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EYE+LL + + E P+ + +R + + +G + T+ NF D+ +T++R P H
Sbjct: 10 EYEKLLDQAY----EQLPDKIFEAKRFKVPKGYSVIQGNR-TIIKNFGDVSRTLNRDPQH 64
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
V+ +LL ELGTSG+++G R +++G+F ++ YV + +
Sbjct: 65 VLKYLLRELGTSGNVEG-NRAILQGKFTHYVINDRVKEYVDNFVM 108
>sp|O27958|IF2B_ARCFU Translation initiation factor 2 subunit beta OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2b PE=3 SV=1
Length = 137
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YEELL R F L + + R R + + REG + T+ NF + KT++R DH+
Sbjct: 5 YEELLERAFEKLADKD---VVRRERFEIPRVSIQREGAR-TILKNFSQIAKTLNRSEDHL 60
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+++ LGT+G +D RLV++G+F + + YV Y L
Sbjct: 61 YKYIVKSLGTAGFIDN-GRLVLQGKFTESELQKEVDDYVRLYVL 103
>sp|Q9HKJ3|IF2B_THEAC Translation initiation factor 2 subunit beta OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=eif2b PE=3 SV=1
Length = 209
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YE+LL + N+L + + DR + + P+++REG K T+ NF D+ ++R P+H
Sbjct: 4 DYEKLLEKAKNVLSSSTKNI--DRLK--IPDPEIIREG-KATIIRNFQDIVDIINRDPEH 58
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYF 220
++ FL E GT+ +G +RL++ + + + Y++ Y
Sbjct: 59 IIKFLTREFGTNIVQNG-RRLIINRKLTLEELLDKMNEYINTYV 101
>sp|Q97W59|IF2B_SULSO Translation initiation factor 2 subunit beta OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=eif2b PE=1 SV=1
Length = 139
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQSLPNMIILNIGNTTIIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + LV++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAY 103
>sp|A6URT3|IF2B_METVS Translation initiation factor 2 subunit beta OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eif2b
PE=3 SV=1
Length = 138
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y+ELL R R PE+ R + EG + T+ NF D+ K M R
Sbjct: 5 FDYKELLKRA----RSQLPEVVFSDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDTH 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
F++ ELGT+G ++G RL+++G+F + ++ YV++Y L
Sbjct: 60 EFAKFVMKELGTAGDMEG-NRLILQGKFGWRMVNEKIQNYVNEYVL 104
>sp|Q6L0E6|IF2B_PICTO Translation initiation factor 2 subunit beta OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=eif2b PE=3 SV=1
Length = 205
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 115 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP 174
+++Y +LL R +L + R + P V+ EG K T+ NF+D+ + M+R P
Sbjct: 2 NFDYNKLLERASGVLSSKTK----NESRLKIPEPDVIYEG-KSTIIRNFIDITEMMNRDP 56
Query: 175 DHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+ V+ +L E G L G QRL++ + + + + Y++ Y +
Sbjct: 57 EDVIKYLTKEFGIGAVLSG-QRLIINRKVSEDEIQSKMNEYMATYVI 102
>sp|Q974Z6|IF2B_SULTO Translation initiation factor 2 subunit beta OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=eif2b PE=3 SV=2
Length = 139
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY +LL R+++ L E +++G P ++ T+ NF + C + R+
Sbjct: 6 EYIKLLDRLYSKLPERVQKVSGQSL-----PNLIILSIGNNTIIKNFSEYCDRIRREDKL 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFLKSS 224
F+L EL G++D +LV++G+F+ + I+ R++ Y S+
Sbjct: 61 CAKFILKELAAPGNVDENGQLVIQGKFSSASINKIMERFIKTYVQCST 108
>sp|Q6M0H3|IF2B_METMP Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain S2 / LL) GN=eif2b PE=3 SV=1
Length = 138
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYSSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+++ ELGT+G ++G RL+++G+F + ++ YV++Y L
Sbjct: 60 EFAKYVMKELGTAGDMEG-VRLILQGKFGWRMVNEKIQNYVNEYVL 104
>sp|Q97B05|IF2B_THEVO Translation initiation factor 2 subunit beta OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=eif2b PE=3 SV=2
Length = 208
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
Y++LL + ++L + + DR + + P+++REG K T+ NF D+ ++R PD V
Sbjct: 5 YDKLLEKAKDVLSSSTKNI--DRLK--IPEPEIIREG-KATIIRNFQDIIDIINRDPDQV 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
+ FL ELGT+ +G +RL++ + + + + Y++ Y
Sbjct: 60 IKFLTRELGTNIVQNG-RRLIINKKVTLEELQEKMNEYINTY 100
>sp|A6VIT7|IF2B_METM7 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=eif2b PE=3
SV=1
Length = 138
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+++ ELGT+G ++G RL+++G+F + ++ YV++Y L
Sbjct: 60 EFAKYVMKELGTAGDMEG-VRLILQGKFGWRMVNEKIQNYVNEYVL 104
>sp|A9A7T1|IF2B_METM6 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=eif2b PE=3
SV=1
Length = 138
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+++ ELGT+G ++G RL+++G+F + ++ YV++Y L
Sbjct: 60 EFAKYVMKELGTAGDMEG-VRLILQGKFGWRMVNEKIQNYVNEYVL 104
>sp|C3N8N2|IF2B_SULIY Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif2b
PE=3 SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|C3NMA3|IF2B_SULIN Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif2b
PE=3 SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|C3MU32|IF2B_SULIM Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|C3MK63|IF2B_SULIL Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|C4KK87|IF2B_SULIK Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=eif2b PE=3
SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|C3N120|IF2B_SULIA Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.27) GN=eif2b PE=3 SV=1
Length = 139
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKY 219
M +LL EL G++D + L+++G+F+ + ++ R++ Y
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAY 103
>sp|A6UX55|IF2B_META3 Translation initiation factor 2 subunit beta OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eif2b PE=3
SV=1
Length = 139
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+Y+ LL R + L E E+ D R V + EG + T+ NF+D+ K + R+P
Sbjct: 6 YDYDALLKRAVSQLPE---EVFKDVRFEVPHADSFV-EGNR-TMVKNFVDISKVIRREPQ 60
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
++L ELGT+G ++G RL+++G+F ++++V +Y L
Sbjct: 61 FFAKYVLKELGTAGDVEG-PRLILQGKFGNYIINSKIKKFVDEYVL 105
>sp|O27797|IF2B_METTH Translation initiation factor 2 subunit beta OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif2b PE=1 SV=1
Length = 135
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YE+LL R + L PE+ +R V + V++ +T NF ++ ++R P H
Sbjct: 3 DYEKLLERAIDQL---PPEVFETKRFEVPKAYSVIQ--GNRTFIQNFREVADALNRDPQH 57
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
++ FLL ELGT+G+L+G R +++G+F + YV+K+ +
Sbjct: 58 LLKFLLRELGTAGNLEG-GRAILQGKFTHFLINERIEDYVNKFVI 101
>sp|A4FZP0|IF2B_METM5 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=eif2b PE=3
SV=1
Length = 138
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDAQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVSKYFL 221
+++ ELGT+G ++G RL+++G+F + ++ YV++Y L
Sbjct: 60 EFAKYVMKELGTAGDIEG-VRLILQGKFGWRMVNEKIQNYVNEYVL 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,744,203
Number of Sequences: 539616
Number of extensions: 4352812
Number of successful extensions: 11618
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 11361
Number of HSP's gapped (non-prelim): 298
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)