Query 026383
Match_columns 239
No_of_seqs 218 out of 1464
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:19:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026383.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026383hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 4E-50 8.6E-55 357.4 18.7 235 2-238 17-282 (390)
2 KOG0698 Serine/threonine prote 100.0 9.9E-33 2.1E-37 247.7 21.1 175 45-238 37-215 (330)
3 PF00481 PP2C: Protein phospha 100.0 1.1E-31 2.4E-36 232.3 13.1 166 50-238 2-170 (254)
4 KOG0697 Protein phosphatase 1B 100.0 3.4E-31 7.3E-36 225.7 14.0 166 50-238 24-194 (379)
5 PLN03145 Protein phosphatase 2 100.0 5.1E-30 1.1E-34 232.3 19.1 164 50-238 68-235 (365)
6 PTZ00224 protein phosphatase 2 100.0 5.8E-28 1.3E-32 219.8 18.0 152 47-238 22-174 (381)
7 KOG0699 Serine/threonine prote 99.9 2.4E-25 5.1E-30 195.9 13.4 72 154-238 329-400 (542)
8 COG0631 PTC1 Serine/threonine 99.9 1E-24 2.2E-29 190.0 15.0 149 50-213 11-160 (262)
9 smart00332 PP2Cc Serine/threon 99.9 1.7E-21 3.6E-26 167.1 19.2 148 51-216 9-157 (255)
10 cd00143 PP2Cc Serine/threonine 99.9 9.7E-21 2.1E-25 161.7 19.5 150 51-216 4-154 (254)
11 PRK14559 putative protein seri 99.9 1.2E-20 2.6E-25 181.1 15.7 147 50-206 378-530 (645)
12 KOG1323 Serine/threonine phosp 99.8 8.2E-18 1.8E-22 147.2 13.6 147 55-215 113-298 (493)
13 PF13672 PP2C_2: Protein phosp 99.5 5.4E-13 1.2E-17 111.8 10.7 133 52-202 3-139 (212)
14 KOG1379 Serine/threonine prote 99.1 2.7E-09 5.8E-14 93.6 12.5 103 60-185 90-199 (330)
15 smart00331 PP2C_SIG Sigma fact 99.0 5.1E-09 1.1E-13 86.4 12.6 108 51-184 7-116 (193)
16 KOG0618 Serine/threonine phosp 98.8 2.2E-08 4.8E-13 98.3 9.0 130 80-238 550-688 (1081)
17 TIGR02865 spore_II_E stage II 97.3 0.0049 1.1E-07 61.6 13.2 116 54-202 560-678 (764)
18 PF07228 SpoIIE: Stage II spor 96.9 0.021 4.5E-07 46.6 12.0 87 80-185 3-92 (193)
19 COG3342 Uncharacterized conser 28.9 4E+02 0.0086 23.3 8.2 114 79-214 78-202 (265)
20 COG4309 Uncharacterized conser 26.4 1E+02 0.0022 22.6 3.5 40 191-232 34-75 (98)
21 TIGR02276 beta_rpt_yvtn 40-res 22.6 1.4E+02 0.003 17.1 3.2 19 166-184 3-21 (42)
22 COG2873 MET17 O-acetylhomoseri 20.3 70 0.0015 29.7 2.0 48 154-215 336-397 (426)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-50 Score=357.41 Aligned_cols=235 Identities=49% Similarity=0.793 Sum_probs=207.1
Q ss_pred chHHHHHhhhccCCCCCCCCCCCC-CCCCCC-CCCccCcccCCCCCccceeeeeeecCCCCCCCceeeccCCCCCCCC-C
Q 026383 2 VSATFMKIVSPCWKPSTEGENSNS-DGEDNG-RVDGLLWYKDSGHHVSGEFSMAVVQANNQLEDCSQLESGPLSSLES-G 78 (239)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~w~~d~~~~~~g~~s~~~~~~r~~~ED~~~v~~~~l~~~~~-~ 78 (239)
|++..+++.+.|++|..+...... +++..+ +.++++|+++...+..|+++++..+.++.++|...+..+++..... .
T Consensus 17 ~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~ 96 (390)
T KOG0700|consen 17 MKSTPMRLKRSCLRPIRRGESSSRSGSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEE 96 (390)
T ss_pred hccccchhhhhccCCCccccccccccccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeecc
Confidence 677889999999999987655443 222233 6799999999999999999999999998889988888777655444 5
Q ss_pred CCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcc-------cccccC---------------------CcchHHHHHHH
Q 026383 79 PQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGA-------EFTSES---------------------CGISADVITRA 130 (239)
Q Consensus 79 ~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~-------~~~~~~---------------------~~~~~~~i~~a 130 (239)
++..|+||||||||++|++|++++|+.++..+|+. +|..+. ...+.++|.+|
T Consensus 97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A 176 (390)
T KOG0700|consen 97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA 176 (390)
T ss_pred CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence 68999999999999999999999999999977754 244442 45788999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHHH
Q 026383 131 FLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE 210 (239)
Q Consensus 131 f~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~R 210 (239)
|+++|++|++.+.+.+..+|+.+.+||||+|++|++..|||||+|||||||+...+.++.+.++|||+||++++++|++|
T Consensus 177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R 256 (390)
T KOG0700|consen 177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR 256 (390)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999875555589999999999999999999
Q ss_pred HHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 211 LRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 211 I~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
|++.||+|++++++++ |||+|+|+||
T Consensus 257 ir~eHPdd~~~vv~~~--~RvkG~L~vs 282 (390)
T KOG0700|consen 257 IRSEHPDDPHIVVNKH--WRVKGILQVS 282 (390)
T ss_pred HHHhCCCCcceEeecc--ceeeEEEEee
Confidence 9999999999999998 7999999997
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-33 Score=247.70 Aligned_cols=175 Identities=35% Similarity=0.482 Sum_probs=140.0
Q ss_pred CccceeeeeeecC-CCCCCCceeeccCCCCCCCCCC-CeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcc
Q 026383 45 HVSGEFSMAVVQA-NNQLEDCSQLESGPLSSLESGP-QGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGI 122 (239)
Q Consensus 45 ~~~g~~s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~-~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~ 122 (239)
..+-..+.+.+++ |..|||++.............. ...||||||||||+.+|+|+.++|+..|.+++.. .... ..
T Consensus 37 ~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~--~~~~-~~ 113 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAF--PKDR-QD 113 (330)
T ss_pred ccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhc--ccch-HH
Confidence 3333455556666 7789999988765432222233 6899999999999999999999999999976431 1111 35
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECC-EEEEEEccCCeEEEEeecCCCCceeEEeCCCCC
Q 026383 123 SADVITRAFL-ETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSG-LLYIANAGDSRVVLGRMENDVKEVKAVQLSSEH 200 (239)
Q Consensus 123 ~~~~i~~af~-~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~-~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH 200 (239)
.+++++++|. ++|..|++. .......||||++++|.++ +|||||+|||||||++.+ .++++||.||
T Consensus 114 ~~~a~~~~F~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~-----~~a~~Ls~DH 181 (330)
T KOG0698|consen 114 VKDALRRAFLTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG-----GVAVQLSVDH 181 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC-----CeeeeCCCCC
Confidence 8899999999 699999865 1123568999999999966 999999999999999864 2899999999
Q ss_pred CCCCHHHHHHHHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 201 NASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 201 ~~~~~~Er~RI~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
+|+.+.|++||+++| +.|....++|||+|.|+||
T Consensus 182 kP~~~~E~~RI~~~G----G~v~~~~~~~Rv~G~Lavs 215 (330)
T KOG0698|consen 182 KPDREDERERIEAAG----GRVSNWGGVWRVNGVLAVS 215 (330)
T ss_pred CCCcHHHHHHHHHcC----CEEEEcCCcceEeceEEEe
Confidence 999999999999999 6666677789999999997
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.97 E-value=1.1e-31 Score=232.27 Aligned_cols=166 Identities=30% Similarity=0.421 Sum_probs=128.7
Q ss_pred eeeeeecC-CCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHH
Q 026383 50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVIT 128 (239)
Q Consensus 50 ~s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~ 128 (239)
++.+..++ |..|||++.+..+.. ......+..+|||||||||.++|+|++++|+..|.+.+... ....+.++|.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~-~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~----~~~~~~~al~ 76 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFN-SNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFN----DGNDIEEALR 76 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEET-CCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHH----TCHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcc-ccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccc----cccchhhccc
Confidence 34555555 889999999875431 11344578999999999999999999999998888653211 1116889999
Q ss_pred HHHHH-HHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEE-eCCCCCCCCCHH
Q 026383 129 RAFLE-TEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAV-QLSSEHNASMEF 206 (239)
Q Consensus 129 ~af~~-~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~-~LT~dH~~~~~~ 206 (239)
++|.. +++.+...... . ....+||||++++|.+++|||||+|||||||++.+ ... +||+||+|+++.
T Consensus 77 ~a~~~~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~------~~~~~Lt~dH~~~~~~ 145 (254)
T PF00481_consen 77 QAFLAFTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG------GIIKQLTRDHKPSNPD 145 (254)
T ss_dssp HHHHHHHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT------EEEEESS---STTSHH
T ss_pred ceeeecccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc------ccccccccccccchhh
Confidence 99999 88888763332 1 23569999999999999999999999999999998 666 999999999999
Q ss_pred HHHHHHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 207 VREELRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 207 Er~RI~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
|++||+++|| .+.. .|||+|.|++|
T Consensus 146 E~~RI~~~gg----~v~~---~~rv~g~l~~s 170 (254)
T PF00481_consen 146 ERERIRKAGG----RVSE---NGRVNGVLAVS 170 (254)
T ss_dssp HHHHHHHTT-----GEEE---TEEETTTBSSS
T ss_pred ccceeecccc----cccc---chhhhhccccc
Confidence 9999999995 3332 45999999887
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=225.69 Aligned_cols=166 Identities=25% Similarity=0.395 Sum_probs=138.9
Q ss_pred eeeeeecC-CCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccc----cCCcchH
Q 026383 50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTS----ESCGISA 124 (239)
Q Consensus 50 ~s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~----~~~~~~~ 124 (239)
|.++++|+ |-.|||.+...... ..+-++.+||||||||.|+++|.+++++|.++|.+.- .|.. ..-++.+
T Consensus 24 yg~SSMQGWR~eMEDah~A~~~l---~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse--~F~~~~k~gsv~~~~ 98 (379)
T KOG0697|consen 24 YGVSSMQGWRVEMEDAHTAVAGL---PSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSE--EFRGMTKNGSVENVE 98 (379)
T ss_pred eeeccccchhhhhhhhhhhhhcC---CCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhH--HHhhhccCCcHHHHH
Confidence 77888888 78999999876443 2334579999999999999999999999999998542 2222 1123677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCC
Q 026383 125 DVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASM 204 (239)
Q Consensus 125 ~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~ 204 (239)
.-|+..|+++|+.+........ ....+||||+.++|...++|++|+|||||||+|++ +++.-|.||+|.+
T Consensus 99 ~GIrtGFL~iDE~mr~~~~~~~----~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng------~~~f~TqDHKP~~ 168 (379)
T KOG0697|consen 99 KGIRTGFLSIDEIMRTLSDISK----GSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG------EVVFSTQDHKPYL 168 (379)
T ss_pred hhHhhcceeHHHHHhhhhhhhc----ccccCCceEEEEEecCceEEEEecCcchhheecCC------ceEEeccCCCCCC
Confidence 8899999999998876544321 22459999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 205 EFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 205 ~~Er~RI~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
|.|++||+.+| +-|..+ ||||.|+||
T Consensus 169 p~EkeRIqnAG----GSVMIq----RvNGsLAVS 194 (379)
T KOG0697|consen 169 PKEKERIQNAG----GSVMIQ----RVNGSLAVS 194 (379)
T ss_pred hHHHHHHhcCC----CeEEEE----Eecceeeee
Confidence 99999999999 677888 999999998
No 5
>PLN03145 Protein phosphatase 2c; Provisional
Probab=99.97 E-value=5.1e-30 Score=232.31 Aligned_cols=164 Identities=27% Similarity=0.354 Sum_probs=127.1
Q ss_pred eeeeeecCCCCCCCceeeccCCCC---CC-CCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHH
Q 026383 50 FSMAVVQANNQLEDCSQLESGPLS---SL-ESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISAD 125 (239)
Q Consensus 50 ~s~~~~~~r~~~ED~~~v~~~~l~---~~-~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ 125 (239)
.+.+.+|.|..|||++++..+... .. .......||||||||||+.+++|++++|++.|.+.. . ....+++
T Consensus 68 ~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~--~----~~~~~~~ 141 (365)
T PLN03145 68 GAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE--D----FPREIEK 141 (365)
T ss_pred EEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh--c----cchhHHH
Confidence 344555669999999877543210 00 112236899999999999999999999999998431 1 1235678
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCH
Q 026383 126 VITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME 205 (239)
Q Consensus 126 ~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~ 205 (239)
+|.++|..+|+.|.+.... . ....+|||+++++|.++++||||+|||||||++.+ ++++||+||+|.++
T Consensus 142 al~~af~~~d~~~~~~~~~----~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g------~~~~LT~DH~~~~~ 210 (365)
T PLN03145 142 VVSSAFLQTDTAFAEACSL----D-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG------KAIEMSRDHKPMCS 210 (365)
T ss_pred HHHHHHHHHhHHHHhhhcc----c-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC------eEEEecCCCCCCCH
Confidence 8999999999998764321 1 12348999999999999999999999999999988 89999999999999
Q ss_pred HHHHHHHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 206 FVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 206 ~Er~RI~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
.|++||++.|+ .+. .| |++|.+.||
T Consensus 211 ~E~~RI~~~Gg----~v~--~g--~v~g~l~vT 235 (365)
T PLN03145 211 KERKRIEASGG----YVY--DG--YLNGQLNVA 235 (365)
T ss_pred HHHHHHHHcCC----cee--cc--eECCccccc
Confidence 99999999984 332 34 777777665
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.96 E-value=5.8e-28 Score=219.78 Aligned_cols=152 Identities=24% Similarity=0.292 Sum_probs=120.4
Q ss_pred cceeeeeeecCCCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHH
Q 026383 47 SGEFSMAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADV 126 (239)
Q Consensus 47 ~g~~s~~~~~~r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~ 126 (239)
+...+.+..|.|+.|||++.+...+ +..||||||||||.++|+|++++|+..+.+. . .....+.
T Consensus 22 ~~~g~~s~~G~R~~nED~~~v~~~~--------~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~-----~---~~~~~~~ 85 (381)
T PTZ00224 22 FRCASACVNGYRESMEDAHLLYLTD--------DWGFFGVFDGHVNDECSQYLARAWPQALEKE-----P---EPMTDER 85 (381)
T ss_pred EEEEEEeCCCCCCCCCCeeEeccCC--------CceEEEEEeCCCcHHHHHHHHHHHHHHHHhc-----c---ccccHHH
Confidence 3344555556699999998764322 4579999999999999999999999887632 1 1123456
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEE-CCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCH
Q 026383 127 ITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIIC-SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME 205 (239)
Q Consensus 127 i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~-~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~ 205 (239)
|+++|..+|++|++.. ..+|||+++++|. +.++||||||||||||++.+ ++++||+||+|.++
T Consensus 86 l~~a~~~~d~~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g------~~~~LT~DH~~~~~ 149 (381)
T PTZ00224 86 MEELCLEIDEEWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG------KLVFATEDHKPNNP 149 (381)
T ss_pred HHHHHHHHHHHHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC------EEEEcccCCCCCCH
Confidence 8999999999987431 1369999998886 57999999999999999988 99999999999999
Q ss_pred HHHHHHHHcCCCCCCeEEeeCCeeeeeeEEeec
Q 026383 206 FVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 238 (239)
Q Consensus 206 ~Er~RI~~~g~~d~~~vv~~~g~~RV~G~l~vS 238 (239)
.|++||++.++ .+.. + ||+|.+.||
T Consensus 150 ~E~~RI~~~gg----~v~~--~--Rv~G~l~vT 174 (381)
T PTZ00224 150 GERQRIEACGG----RVVS--N--RVDGDLAVS 174 (381)
T ss_pred HHHhHHHHccC----Eecc--c--cccCceeee
Confidence 99999999984 3332 3 888888776
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-25 Score=195.90 Aligned_cols=72 Identities=35% Similarity=0.478 Sum_probs=66.3
Q ss_pred CCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEeeCCeeeeee
Q 026383 154 SAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKG 233 (239)
Q Consensus 154 ~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~g~~d~~~vv~~~g~~RV~G 233 (239)
.+||||+||||.+++|||||.|||||||+|.+ +++-+|.||+|.++.|..||.++|| + |.-+| ||+|
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G------kAvdmS~DHKPEDevE~~RI~~AGG---~--vtlDG--RVNG 395 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG------KAVDMSVDHKPEDEVETNRIHAAGG---Q--VTLDG--RVNG 395 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCC------ceeecccCCCcccHHHHHHHHhcCC---e--Eeecc--eecC
Confidence 49999999999999999999999999999999 9999999999999999999999996 3 33456 9999
Q ss_pred EEeec
Q 026383 234 IIQVT 238 (239)
Q Consensus 234 ~l~vS 238 (239)
-|.+|
T Consensus 396 GLNLS 400 (542)
T KOG0699|consen 396 GLNLS 400 (542)
T ss_pred ccchh
Confidence 98776
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=1e-24 Score=190.05 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=119.2
Q ss_pred eeeeeecC-CCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHH
Q 026383 50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVIT 128 (239)
Q Consensus 50 ~s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~ 128 (239)
+..+.++. |..|||.+.+..+. .... ..||+|||||||+++++++++.+.+.|.+.+............++.+.
T Consensus 11 ~~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~ 85 (262)
T COG0631 11 AGLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLK 85 (262)
T ss_pred eeeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 44555555 77899999886422 2222 579999999999999999999999999977543322222112688999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHH
Q 026383 129 RAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVR 208 (239)
Q Consensus 129 ~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er 208 (239)
+++..+++.+..... .......+|||++++++.++++|+|||||||+||++++ .++|||.||++.++.|+
T Consensus 86 ~~~~~~n~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~------~~~~lT~DH~~~~~~~~ 155 (262)
T COG0631 86 EAILKANEAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG------ELKQLTEDHSLVNRLEQ 155 (262)
T ss_pred HHHHHHHHHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC------ceEEeccCCcHHHHHHH
Confidence 999999999987643 23445679999999999999999999999999999998 99999999999999999
Q ss_pred HHHHH
Q 026383 209 EELRA 213 (239)
Q Consensus 209 ~RI~~ 213 (239)
.|+..
T Consensus 156 ~~~~~ 160 (262)
T COG0631 156 RGIIT 160 (262)
T ss_pred hcCCC
Confidence 98443
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.89 E-value=1.7e-21 Score=167.07 Aligned_cols=148 Identities=33% Similarity=0.507 Sum_probs=119.1
Q ss_pred eeeeecC-CCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHH
Q 026383 51 SMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITR 129 (239)
Q Consensus 51 s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~ 129 (239)
+.+..++ |.++||++.+.... ..+..+|+|+|||||..+|+++++.+...+.+.... .......+...|.+
T Consensus 9 ~~~~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 80 (255)
T smart00332 9 GLSSMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIK--HKDELEDVEEALRK 80 (255)
T ss_pred EEecCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhh--cccchhHHHHHHHH
Confidence 3344555 78999999886431 136889999999999999999999999988844211 11111257788999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHH
Q 026383 130 AFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVRE 209 (239)
Q Consensus 130 af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~ 209 (239)
+|..+++.+........ ....+|||++++++.++++|++|+||||+|+.+.+ +..+||.||++.++.|..
T Consensus 81 ~~~~~~~~~~~~~~~~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~------~~~~lt~dh~~~~~~~~~ 150 (255)
T smart00332 81 AFLKTDEEILEELESLE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG------KAVQLTEDHKPSNEDERA 150 (255)
T ss_pred HHHHHHHHHHHhhhhcc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC------ceeEcCCCCCCcCHHHHH
Confidence 99999999977654322 33568999999999999999999999999999987 789999999999999999
Q ss_pred HHHHcCC
Q 026383 210 ELRALHP 216 (239)
Q Consensus 210 RI~~~g~ 216 (239)
||...++
T Consensus 151 ~i~~~~~ 157 (255)
T smart00332 151 RIEAAGG 157 (255)
T ss_pred HHHHcCC
Confidence 9999874
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.87 E-value=9.7e-21 Score=161.70 Aligned_cols=150 Identities=29% Similarity=0.448 Sum_probs=120.8
Q ss_pred eeeeecC-CCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHH
Q 026383 51 SMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITR 129 (239)
Q Consensus 51 s~~~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~ 129 (239)
+.+..++ |..|||++.+.....+ .+..+|+|+|||||...++++++.+.+.|.+.+..... .....+...|++
T Consensus 4 ~~~~~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~-~~~~~~~~~l~~ 77 (254)
T cd00143 4 GVSDKGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT-LSEEDIEEALRK 77 (254)
T ss_pred eeecCCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHH
Confidence 3444554 7789999988543200 25789999999999999999999999999966532211 123467788999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHH
Q 026383 130 AFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVRE 209 (239)
Q Consensus 130 af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~ 209 (239)
+|..+++.+....... .....+|||++++++.++.++++|+||||+|+++.+ +.+++|.||++.++.|+.
T Consensus 78 ~~~~~~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~------~~~~lt~dh~~~~~~~~~ 147 (254)
T cd00143 78 AFLRADEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG------EAVQLTKDHKPVNEEERE 147 (254)
T ss_pred HHHHHHHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC------ceeEcCCCCCCcChHHHH
Confidence 9999999987664421 334568999999999999999999999999999998 899999999999999999
Q ss_pred HHHHcCC
Q 026383 210 ELRALHP 216 (239)
Q Consensus 210 RI~~~g~ 216 (239)
||...++
T Consensus 148 ~i~~~~~ 154 (254)
T cd00143 148 RIEKAGG 154 (254)
T ss_pred HHHHcCC
Confidence 9999986
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.85 E-value=1.2e-20 Score=181.10 Aligned_cols=147 Identities=15% Similarity=0.171 Sum_probs=101.7
Q ss_pred eeeeeecC-CCCCCCceeeccCCCC--CCCC--CCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchH
Q 026383 50 FSMAVVQA-NNQLEDCSQLESGPLS--SLES--GPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISA 124 (239)
Q Consensus 50 ~s~~~~~~-r~~~ED~~~v~~~~l~--~~~~--~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~ 124 (239)
++.+..|. |..|||++.+...... ...+ .....+|+|||||||+.+++.+++...+.|.+.+....... ...+
T Consensus 378 a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~--~~~~ 455 (645)
T PRK14559 378 AGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDE--LPDE 455 (645)
T ss_pred EEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccc--ccHH
Confidence 45566676 8899999876432100 0011 11357899999999888766666665555553332111111 1246
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEe-ecCCCCceeEEeCCCCCCCC
Q 026383 125 DVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR-MENDVKEVKAVQLSSEHNAS 203 (239)
Q Consensus 125 ~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r-~~~~~~~~~~~~LT~dH~~~ 203 (239)
+.|+++|..++..+.+...... ......+|||+++++|.++.+|++||||||+|+++ ++ +++|||+||++.
T Consensus 456 ~~L~~ai~~AN~~I~~~~~~~~--~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g------~l~QLT~DHs~~ 527 (645)
T PRK14559 456 ETIREAIYLANEAIYDLNQQNA--RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG------GLEQLTVDHEVG 527 (645)
T ss_pred HHHHHHHHHHHHHHHHHhhhcc--cccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC------eEEEeCCCCCHH
Confidence 7899999999999976543221 11334699999999999999999999999999885 45 899999999987
Q ss_pred CHH
Q 026383 204 MEF 206 (239)
Q Consensus 204 ~~~ 206 (239)
++.
T Consensus 528 ~~l 530 (645)
T PRK14559 528 QRE 530 (645)
T ss_pred HHH
Confidence 553
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.76 E-value=8.2e-18 Score=147.21 Aligned_cols=147 Identities=29% Similarity=0.416 Sum_probs=110.1
Q ss_pred ecCCCCCCCceeeccCC-----CCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccc------------
Q 026383 55 VQANNQLEDCSQLESGP-----LSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTS------------ 117 (239)
Q Consensus 55 ~~~r~~~ED~~~v~~~~-----l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~------------ 117 (239)
...++.+.|.-.+-.+. -+.+....++++|.+||||.|..+|-.+++.|++++..++.+....
T Consensus 113 ~~n~n~~~~~~~l~~g~~~~~k~~~~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~ 192 (493)
T KOG1323|consen 113 KRNSNENDDDPMLTPGGDDTVKSSMFAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNF 192 (493)
T ss_pred CCCCCccccCcCCCCCCCcchhhcccCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhcccccccc
Confidence 33445555555443221 1234445679999999999999999999999999998876411100
Q ss_pred ------------------cC----CcchHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEECCEEEEEEcc
Q 026383 118 ------------------ES----CGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAG 175 (239)
Q Consensus 118 ------------------~~----~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvG 175 (239)
++ +..+..+|+.||+.+|+.+..... .|. ...|||+++++.--++|||||.|
T Consensus 193 g~~~~~s~~s~~~~~~~~ek~Ir~E~LViGAlEsAFqemDeqiarer~-~~~-----~~GGCtalvvi~llGKlYvaNAG 266 (493)
T KOG1323|consen 193 GKHRSESSYSMSEMSREDEKRIRHEHLVIGALESAFQEMDEQIARERQ-VWR-----LPGGCTALVVIVLLGKLYVANAG 266 (493)
T ss_pred ccccccCCcccccccchhhccCchHHhhHHHHHHHHHHHHHHHHHHHH-hhc-----CCCCceEEEeeeeccceEEccCC
Confidence 00 113456899999999998865432 222 35799999999999999999999
Q ss_pred CCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHHHHHHcC
Q 026383 176 DSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALH 215 (239)
Q Consensus 176 DSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~g 215 (239)
||||+|.|++ ..++||++.+|. .||+||+...
T Consensus 267 DsRAIlVrnd------eirplS~efTPe--tERqRlQ~La 298 (493)
T KOG1323|consen 267 DSRAILVRND------EIRPLSKEFTPE--TERQRLQELA 298 (493)
T ss_pred CceEEEEecC------CeeecccccCcH--HHHHHHHHHh
Confidence 9999999998 999999999876 8999999875
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.45 E-value=5.4e-13 Score=111.84 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=73.2
Q ss_pred eeeecCCCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHH
Q 026383 52 MAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAF 131 (239)
Q Consensus 52 ~~~~~~r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af 131 (239)
.+..+.+.++||++.+.... +..+++|+||+||...++.++..+...+.+.+......... . .....+
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~--------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~-~---~~~~~~ 70 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD--------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESP-S---SIEALI 70 (212)
T ss_dssp ----TTSSS--EEEEEE-TC--------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHH-H---HHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC--------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccch-H---HHHHHH
Confidence 34556788999999865443 56777999999977777776666666666544332221110 1 022222
Q ss_pred HHHHHHHHHHH---HhhhccCCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEE-eecCCCCceeEEeCCCCCCC
Q 026383 132 LETEEEFLSLV---RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLG-RMENDVKEVKAVQLSSEHNA 202 (239)
Q Consensus 132 ~~~d~~~~~~~---~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~-r~~~~~~~~~~~~LT~dH~~ 202 (239)
..+.+++.... .............+||++++++.++.++++|+||||+++. +.+ ...+++.+|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g------~~~~l~~~~~~ 139 (212)
T PF13672_consen 71 RAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG------EIQQLTDDHSG 139 (212)
T ss_dssp HHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT------EEEE-S---BH
T ss_pred HHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC------EEEEcCCCccc
Confidence 33333332211 0000011233457999999999999999999999999655 555 88899999963
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.05 E-value=2.7e-09 Score=93.60 Aligned_cols=103 Identities=22% Similarity=0.286 Sum_probs=73.2
Q ss_pred CCCCceeeccCCCCCCCCCCCeEEEEEecCCCCh-----HHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHHHHH
Q 026383 60 QLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGP-----EAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAFLET 134 (239)
Q Consensus 60 ~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~-----~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af~~~ 134 (239)
.=||.+++..++ ...+.||+||.||. ..+.| +..|.....+..+ ...+...++...|.+||.++
T Consensus 90 ~GEDa~Fvss~~--------~~~v~GVADGVGGWa~~GiDpg~f-S~eLM~~ce~~v~--~~~~~~~~P~~lL~~ay~~l 158 (330)
T KOG1379|consen 90 GGEDAWFVSSNP--------HAIVMGVADGVGGWAEYGIDPGAF-SRELMSNCERLVQ--NSDFNPSDPVNLLEKAYAEL 158 (330)
T ss_pred CCCcceeeccCc--------ccceEEEccccchHhhcCcCHHHH-HHHHHHHHHHHhc--ccccCCCChHHHHHHHHHHH
Confidence 458999987654 67899999999954 66666 4444555553322 12233347888888888766
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCeEEEEEEE--CCEEEEEEccCCeEEEEeec
Q 026383 135 EEEFLSLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRME 185 (239)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~r~~ 185 (239)
-+ .....-.+|||+++++. +++||+||+|||-..+.|++
T Consensus 159 ~~------------~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G 199 (330)
T KOG1379|consen 159 KS------------QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG 199 (330)
T ss_pred hh------------cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC
Confidence 32 12223467788888887 89999999999999999998
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.03 E-value=5.1e-09 Score=86.42 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=76.8
Q ss_pred eeeeecCCCCCCCceeeccCCCCCCCCCCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHH
Q 026383 51 SMAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRA 130 (239)
Q Consensus 51 s~~~~~~r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~a 130 (239)
+.....+...-.|.+.+...+ .+..+++|+||||+...|.+++..+...+.+.+.. . ..+.+.
T Consensus 7 ~~~~~p~~~~~GD~~~~~~~~-------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~-----~-----~~~~~~ 69 (193)
T smart00331 7 AQYYEDATQVGGDFYDVVKLP-------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSE-----G-----ISLSQI 69 (193)
T ss_pred EEEEcchHhcCccEEEEEEeC-------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhc-----C-----CCHHHH
Confidence 333444566778888765433 24789999999998888888888888888844321 1 124445
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCeEEEEEE--ECCEEEEEEccCCeEEEEee
Q 026383 131 FLETEEEFLSLVRNQWLNKPQIASAGSCCLVGII--CSGLLYIANAGDSRVVLGRM 184 (239)
Q Consensus 131 f~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li--~~~~l~vANvGDSRavl~r~ 184 (239)
+..+++.+... .....|+|++++++ .+++++++|+||+|+++.+.
T Consensus 70 l~~~n~~l~~~---------~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~ 116 (193)
T smart00331 70 LERLNRAIYEN---------GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRA 116 (193)
T ss_pred HHHHHHHHHhc---------CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEEC
Confidence 66666666432 12347999999998 68899999999999999983
No 16
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.78 E-value=2.2e-08 Score=98.32 Aligned_cols=130 Identities=15% Similarity=0.207 Sum_probs=102.9
Q ss_pred CeEEEEEecCCCChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCeE
Q 026383 80 QGTFVGIYDGHGGPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCC 159 (239)
Q Consensus 80 ~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa 159 (239)
..+.||.|||-+-.+...+++..+..++.++++.. ++..+.|+.+|+.++.++-..- ...|..+
T Consensus 550 ~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~------~~et~~mr~~fl~~~rklg~~g----------~~lg~~~ 613 (1081)
T KOG0618|consen 550 PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLY------GNETEQMRNTFLRLNRKLGEEG----------QVLGGSV 613 (1081)
T ss_pred CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhc------cChHHHHHHHHHHHhhhhhhhh----------ccccchh
Confidence 46899999999999999999999999999876422 2334559999999999884332 2356666
Q ss_pred EEEEEECC--------EEEEEEccCCeEEEEeecCCCCceeEEeCCCCC-CCCCHHHHHHHHHcCCCCCCeEEeeCCeee
Q 026383 160 LVGIICSG--------LLYIANAGDSRVVLGRMENDVKEVKAVQLSSEH-NASMEFVREELRALHPDDPQIVVLKHKVWR 230 (239)
Q Consensus 160 ~v~li~~~--------~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH-~~~~~~Er~RI~~~g~~d~~~vv~~~g~~R 230 (239)
+.+.|..+ ++.+||+|+|.+|+++.+ +.+++|+-. ..-+++|.+||+..++ ++..+| +
T Consensus 614 ~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng------~~~p~t~~~~~~v~~eE~~RI~~~~g-----~i~ed~--k 680 (1081)
T KOG0618|consen 614 VLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNG------KPLPTTRSPMLEVDREEYKRIVDSKG-----FITEDN--K 680 (1081)
T ss_pred hheeecccccCcccchhhhHhhhccchhhhhhcC------CcCcccccccccCCHHHHHHHHHhcC-----eecCCC--e
Confidence 77777543 789999999999999998 888887665 4459999999999985 566677 8
Q ss_pred eeeEEeec
Q 026383 231 VKGIIQVT 238 (239)
Q Consensus 231 V~G~l~vS 238 (239)
++|+...|
T Consensus 681 ~ngvt~~t 688 (1081)
T KOG0618|consen 681 LNGVTSST 688 (1081)
T ss_pred eeceeeee
Confidence 99887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.26 E-value=0.0049 Score=61.64 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=74.4
Q ss_pred eecCCCCCCCceeeccCCCCCCCCCCCeEEEEEecCCC-ChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHHH
Q 026383 54 VVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHG-GPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAFL 132 (239)
Q Consensus 54 ~~~~r~~~ED~~~v~~~~l~~~~~~~~~~lfgVfDGHG-G~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af~ 132 (239)
..+++....|.+.+...+ ++..+++|.||.| |..|+ ..+......+.+.+... ... ..++.
T Consensus 560 ~k~g~~vsGD~y~~~~l~-------~g~~~~~laDGmGhG~~Aa-~~S~~~~~ll~~~~~~g------~~~----~~ai~ 621 (764)
T TIGR02865 560 AKDGELVSGDSYSFGKLS-------AGKYAVAISDGMGSGPEAA-QESSACVRLLEKFLESG------FDR----EVAIK 621 (764)
T ss_pred cCCCCcccCceEEEEEEC-------CCEEEEEEEcccCCCHHHH-HHHHHHHHHHHHHHHcC------CCH----HHHHH
Confidence 334567889998765322 2457899999999 55555 44555555554222111 112 34556
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCeEEEEEEE--CCEEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCC
Q 026383 133 ETEEEFLSLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNA 202 (239)
Q Consensus 133 ~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~ 202 (239)
.+|..+... . ...+.+|+.+++|. .+++.++|+|+++.++.+++ .+.+++..+-|
T Consensus 622 ~lN~~L~~~------~---~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~------~v~~i~s~~lP 678 (764)
T TIGR02865 622 TVNSILSLR------S---TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA------KVEVIRSSNLP 678 (764)
T ss_pred HHHHHHHhC------C---CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC------EEEEecCCCce
Confidence 666555321 1 12368999998885 68999999999999998876 67777666544
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=96.93 E-value=0.021 Score=46.58 Aligned_cols=87 Identities=22% Similarity=0.196 Sum_probs=54.5
Q ss_pred CeEEEEEecCCC-ChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCe
Q 026383 80 QGTFVGIYDGHG-GPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSC 158 (239)
Q Consensus 80 ~~~lfgVfDGHG-G~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsT 158 (239)
+..++.|.|+.| |..|| +++-.+...+...+ ... .. ..+.+..+++.+..... . ....+|
T Consensus 3 ~~~~~~v~D~~GhG~~aa-~~~~~~~~~~~~~~-----~~~-~~----p~~~l~~ln~~l~~~~~----~----~~~~~t 63 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAA-LLSAALASAIRELL-----DEG-LD----PEELLEALNRRLYRDLK----G----DNRYAT 63 (193)
T ss_dssp TEEEEEEEEESSSSHHHH-HHHHHHHHHHHHHH-----HTT-TS----HHHHHHHHHHHHHHHTT----T----TSTTEE
T ss_pred CEEEEEEEEecCCCHHHH-HHHHHHHHHHHHHH-----HcC-CC----HHHHHHHHHHHHHHHhh----h----ccccce
Confidence 568899999999 55544 44555555555322 111 12 33344455555533221 1 136778
Q ss_pred EEEEEEE--CCEEEEEEccCCeEEEEeec
Q 026383 159 CLVGIIC--SGLLYIANAGDSRVVLGRME 185 (239)
Q Consensus 159 a~v~li~--~~~l~vANvGDSRavl~r~~ 185 (239)
++++.+. .++++++|+|++++++.+.+
T Consensus 64 ~~~~~~d~~~~~l~~~~aG~~~~l~~~~~ 92 (193)
T PF07228_consen 64 ACYAIIDPETGTLTYANAGHPPPLLLRPG 92 (193)
T ss_dssp EEEEEEETTTTEEEEEEESSSEEEEEETT
T ss_pred EEEEEecccceEEEEeCCCCCCEEEEecc
Confidence 8888875 56899999999999999984
No 19
>COG3342 Uncharacterized conserved protein [Function unknown]
Probab=28.85 E-value=4e+02 Score=23.30 Aligned_cols=114 Identities=16% Similarity=0.137 Sum_probs=66.5
Q ss_pred CCeEEEEEecCCC------ChHHHHHHHHHHHHHHHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcc----
Q 026383 79 PQGTFVGIYDGHG------GPEAARFVNDHLFDNIKTIHGAEFTSESCGISADVITRAFLETEEEFLSLVRNQWLN---- 148 (239)
Q Consensus 79 ~~~~lfgVfDGHG------G~~aa~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~af~~~d~~~~~~~~~~~~~---- 148 (239)
...-=.+|.|-|| |.+|-+++.+..-+.+.-+ -++. ....+.+++.++|+.+.-.+.+.+.+.+.-
T Consensus 78 ~~~RQvgvV~~~G~a~aFtG~ec~~~ag~~~G~~~~v~--GNiL--a~~evveaMA~afE~~kG~L~erLL~AL~AG~~a 153 (265)
T COG3342 78 RELRQVGVVDQKGRAAAFTGRECYEYAGHRAGENYTVQ--GNLL--AGPEVVEAMAKAFESAKGWLVERLLAALAAGQAA 153 (265)
T ss_pred hhheeeeEEcCCCceeeecCcchhhhhhcccCCceEee--cccc--ccHHHHHHHHHhHHhccccHHHHHHHHHHhhccc
Confidence 3455688999999 9999998887765555411 0111 113567788889988655555544433221
Q ss_pred CCCCCCCCCeEEEEEEECCEEEEEEccCCeEEEEeecCCCCce-eEEeCCCCCCCCCHHHHHHHHHc
Q 026383 149 KPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEV-KAVQLSSEHNASMEFVREELRAL 214 (239)
Q Consensus 149 ~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~-~~~~LT~dH~~~~~~Er~RI~~~ 214 (239)
..+....+|.|+.+ +.++|=+ .+.. ..+-|+.|+.|..-.|++|+...
T Consensus 154 GGDRrgvqSAAl~V--------vk~~gg~----------~~~~d~~vDlRVDd~~dPi~eLeRl~~l 202 (265)
T COG3342 154 GGDRRGVQSAALIV--------VKPLGGY----------VGGPDYYVDLRVDDHPDPIPELERLFVL 202 (265)
T ss_pred cCccCCccceEEEE--------EeccCCC----------CCCcceeEeeEeecCCCchHHHHHHHHH
Confidence 11112234444332 2233211 0111 57888999999999999998765
No 20
>COG4309 Uncharacterized conserved protein [Function unknown]
Probab=26.40 E-value=1e+02 Score=22.61 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=27.4
Q ss_pred eeEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEeeCC--eeeee
Q 026383 191 VKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHK--VWRVK 232 (239)
Q Consensus 191 ~~~~~LT~dH~~~~~~Er~RI~~~g~~d~~~vv~~~g--~~RV~ 232 (239)
++...++.||.|. --+..+...+|+.=+.....+| +|||.
T Consensus 34 Ge~leiisDHdP~--pL~~~L~~~~pg~f~wey~e~Gp~vwRv~ 75 (98)
T COG4309 34 GESLEIISDHDPR--PLRYQLSTEFPGKFGWEYLENGPEVWRVE 75 (98)
T ss_pred CCceEeecCCCcH--HHHHHhhhcCCccceeEEecCCCeEEEEE
Confidence 4788899999887 4555566667655555555555 58873
No 21
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=22.58 E-value=1.4e+02 Score=17.12 Aligned_cols=19 Identities=26% Similarity=0.426 Sum_probs=14.4
Q ss_pred CCEEEEEEccCCeEEEEee
Q 026383 166 SGLLYIANAGDSRVVLGRM 184 (239)
Q Consensus 166 ~~~l~vANvGDSRavl~r~ 184 (239)
++.||++|-|+..+.+...
T Consensus 3 ~~~lyv~~~~~~~v~~id~ 21 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDT 21 (42)
T ss_pred CCEEEEEeCCCCEEEEEEC
Confidence 4679999998877776643
No 22
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=20.33 E-value=70 Score=29.73 Aligned_cols=48 Identities=23% Similarity=0.251 Sum_probs=32.1
Q ss_pred CCCCeEEEEEEECC--------------EEEEEEccCCeEEEEeecCCCCceeEEeCCCCCCCCCHHHHHHHHHcC
Q 026383 154 SAGSCCLVGIICSG--------------LLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALH 215 (239)
Q Consensus 154 ~~GsTa~v~li~~~--------------~l~vANvGDSRavl~r~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~g 215 (239)
..|..+++.+=.++ ....||+||+|-.++-.- |+-|.-.+++|+ .++|
T Consensus 336 ~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPA-----------sTTH~ql~~ee~---~~aG 397 (426)
T COG2873 336 PKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPA-----------STTHRQLSEEEQ---AAAG 397 (426)
T ss_pred cCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCc-----------ccchhcCCHHHH---HhcC
Confidence 35666666664332 247899999998766544 777877777777 4455
Done!