Your job contains 1 sequence.
>026384
MAFASRLASKSKQLCSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFET
ALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTY
LLTLKEIRERGLIDEHGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLTAEFDKINKKLG
IRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEEMVEVKSLDVRNFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026384
(239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2052464 - symbol:MGP1 "MALE GAMETOPHYTE DEFECT... 860 5.4e-86 1
UNIPROTKB|Q7DM06 - symbol:Q7DM06 "Putative ATP synthase s... 237 5.7e-20 1
UNIPROTKB|P42639 - symbol:TPM1 "Tropomyosin alpha-1 chain... 118 6.8e-05 1
UNIPROTKB|F1MH18 - symbol:MNS1 "Meiosis-specific nuclear ... 114 0.00052 1
UNIPROTKB|F1P912 - symbol:TPM1 "Uncharacterized protein" ... 111 0.00059 1
UNIPROTKB|F1P9F8 - symbol:GCC2 "Uncharacterized protein" ... 119 0.00063 1
UNIPROTKB|Q5KR49 - symbol:TPM1 "Tropomyosin alpha-1 chain... 109 0.00077 1
UNIPROTKB|F2Z5B6 - symbol:TPM1 "Tropomyosin alpha-1 chain... 109 0.00077 1
>TAIR|locus:2052464 [details] [associations]
symbol:MGP1 "MALE GAMETOPHYTE DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005753
"mitochondrial proton-transporting ATP synthase complex"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0009555 GO:GO:0005753 GO:GO:0008270
GO:GO:0005507 GO:GO:0050897 GO:GO:0015992 GO:GO:0045263
EMBL:AC007019 EMBL:AY046020 EMBL:AY079312 EMBL:AY087107
IPI:IPI00546564 PIR:B84606 RefSeq:NP_179778.1 UniGene:At.24983
IntAct:Q9SJ12 MINT:MINT-4330244 STRING:Q9SJ12 PaxDb:Q9SJ12
PRIDE:Q9SJ12 ProMEX:Q9SJ12 EnsemblPlants:AT2G21870.1 GeneID:816723
KEGG:ath:AT2G21870 GeneFarm:2002 TAIR:At2g21870 eggNOG:NOG259194
HOGENOM:HOG000238761 InParanoid:Q9SJ12 OMA:LGAEAMM PhylomeDB:Q9SJ12
ProtClustDB:CLSN2683717 Genevestigator:Q9SJ12 Uniprot:Q9SJ12
Length = 240
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 172/240 (71%), Positives = 201/240 (83%)
Query: 1 MAFASRLASKSKQLCSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFET 60
MA+ASR S+SKQL VILQ+QHAI VR FA EAA KGDEMLK +F D+K KF+
Sbjct: 1 MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60
Query: 61 ALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTY 120
A+ +LRKEKIT+ PEDPAAV QYANVMKT+R+KAD+FSESQRI + I+T T IPDAR Y
Sbjct: 61 AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120
Query: 121 LLTLKEIR-ERGLIDEHGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLTAEFDKINKKL 179
LL L+EIR RGL DE GAEAMM +ALEKVEK+IKKPL+R+DKKGM LL AEF+K NKKL
Sbjct: 121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180
Query: 180 GIRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEEMVEVKSLDVRNFL 239
GIRKEDLPKYEE LEL +AKAQL+ELK DA+EAME+QKK+EEF+DEEM +VKSLD+RNF+
Sbjct: 181 GIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPDVKSLDIRNFI 240
>UNIPROTKB|Q7DM06 [details] [associations]
symbol:Q7DM06 "Putative ATP synthase subunit" species:3847
"Glycine max" [GO:0005515 "protein binding" evidence=IPI]
EMBL:X79057 IntAct:Q7DM06 ProMEX:Q7DM06 Genevestigator:Q7DM06
Uniprot:Q7DM06
Length = 64
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 44/60 (73%), Positives = 54/60 (90%)
Query: 18 QVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFETALGVLRKEKITIAPEDP 77
Q++LQ++HAI VR FA E+AP ALKGDEMLKNIF++VK KFETA+G+L+KEKITI PEDP
Sbjct: 5 QILLQKEHAIPVRHFAKESAPPALKGDEMLKNIFVEVKNKFETAIGILKKEKITIDPEDP 64
>UNIPROTKB|P42639 [details] [associations]
symbol:TPM1 "Tropomyosin alpha-1 chain" species:9823 "Sus
scrofa" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
GO:GO:0005737 GO:GO:0005856 InterPro:IPR000533 Pfam:PF00261
PRINTS:PR00194 PROSITE:PS00326 CTD:7168 eggNOG:NOG304012
HOGENOM:HOG000231521 HOVERGEN:HBG107404 KO:K10373 OrthoDB:EOG4TXBSM
EMBL:X66274 EMBL:DQ629175 PIR:S24972 RefSeq:NP_001090952.1
UniGene:Ssc.37889 PDB:1C1G PDBsum:1C1G ProteinModelPortal:P42639
SMR:P42639 STRING:P42639 PRIDE:P42639 GeneID:100037999
KEGG:ssc:100037999 EvolutionaryTrace:P42639 Uniprot:P42639
Length = 284
Score = 118 (46.6 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 21 LQRQHAISVRFFANEAAPQALKG-DEMLKNIFLDVKKKFETALGVLRKEKITIAPEDPAA 79
L +++A+ R EA +A + + L++ + ++KK + L +K + AP+D
Sbjct: 13 LDKENALD-RAEQAEADKKAAEDRSKRLEDELVSLQKKLKATEDEL--DKYSEAPKDAQE 69
Query: 80 VSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERGLIDEHGAE 139
+ A T E AD+ S ++RI E T L L+E + E G +
Sbjct: 70 KLELAEKKATDAE-ADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK 128
Query: 140 AMMMDALEKVEK-EIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEEQLELKIA 198
+ A + EK EI++ ++ K +++++ +KL I + DL + EE+ EL
Sbjct: 129 VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEG 188
Query: 199 K-AQLEE-LKK--DALEAMETQKKR---EEFKDEEMVEVKS 232
K A+LEE LK + L+++E Q ++ +E K EE ++V S
Sbjct: 189 KCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS 229
>UNIPROTKB|F1MH18 [details] [associations]
symbol:MNS1 "Meiosis-specific nuclear structural protein 1"
species:9913 "Bos taurus" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
GO:GO:0005635 GO:GO:0005882 GeneTree:ENSGT00550000074599
UniGene:Bt.51770 InterPro:IPR026504 PANTHER:PTHR19265 OMA:AKTMMEE
EMBL:DAAA02028875 IPI:IPI01017778 Ensembl:ENSBTAT00000000337
Uniprot:F1MH18
Length = 494
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 57/217 (26%), Positives = 103/217 (47%)
Query: 35 EAAPQALKGDEMLKNIFLDVKKKFETALGVLRKEKITIAP------EDPAAVSQYANVMK 88
E A Q + ++ L+ + L ++K T L L++E + E+ A + + +K
Sbjct: 70 EEAIQKAEENKRLRELQLAQEEKLATELAKLKRESLKDEKLRQQVRENSAELRELEKKLK 129
Query: 89 TV---REKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERGLIDEHGAEAMMMDA 145
+E+A +E I Y R A I ART + E ER + +E AE A
Sbjct: 130 AAYMNKERAAQIAEKDAIKYEQMKRDAEI--ARTMM----EEHERLIKEESAAEDKRNQA 183
Query: 146 LEKVEKEIKKPLMRNDKKGMA----LLTAEF--DKINKKLGIRKEDLPKYEEQLE-LKIA 198
+ +++K L +KK LL + D+I +K I +ED + +++LE +
Sbjct: 184 KAQYSHDLEKQLEEQEKKKQEAYEQLLKEKLMIDEIVRK--IYEEDQLERQQRLEKMNTT 241
Query: 199 KAQLEELKKDALEAMETQKKREEFKDE--EMVEVKSL 233
+ +EE +K+ +A+ +KKREE ++E +++E L
Sbjct: 242 RRYIEEFQKE--QALWRKKKREEMEEENRKIIEFAKL 276
>UNIPROTKB|F1P912 [details] [associations]
symbol:TPM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0045214 "sarcomere organization"
evidence=IEA] [GO:0034614 "cellular response to reactive oxygen
species" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032059 "bleb" evidence=IEA] [GO:0031941 "filamentous actin"
evidence=IEA] [GO:0030016 "myofibril" evidence=IEA] [GO:0008092
"cytoskeletal protein binding" evidence=IEA] [GO:0003065 "positive
regulation of heart rate by epinephrine" evidence=IEA] [GO:0001725
"stress fiber" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] GO:GO:0001701 GO:GO:0030016
GO:GO:0031941 GO:GO:0060048 GO:GO:0055010 InterPro:IPR000533
Pfam:PF00261 PRINTS:PR00194 PROSITE:PS00326
GeneTree:ENSGT00550000074494 OMA:EASAEKY Pfam:PF12718 GO:GO:0003065
EMBL:AAEX03016197 Ensembl:ENSCAFT00000026876 Uniprot:F1P912
Length = 326
Score = 111 (44.1 bits), Expect = 0.00059, P = 0.00059
Identities = 61/234 (26%), Positives = 112/234 (47%)
Query: 7 LASKSKQLCSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFETALGVLR 66
+A+K K L +S+ +R + A ++ A + L++ + ++KK + L
Sbjct: 43 IAAKEKLLRASED--ERDRVLEELHSAEDSLLAADETAAKLEDELVSLQKKLKGTEDEL- 99
Query: 67 KEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKE 126
+K + A +D + A T E AD+ S ++RI E T L L+E
Sbjct: 100 -DKYSEALKDAQEKLELAEKKATDAE-ADVASLNRRIQLVEEELDRAQERLATALQKLEE 157
Query: 127 IRERGLIDEHGAEAMMMDALEKVEK-EIKKPLMRNDKKGMALLTAEFDKINKKLGIRKED 185
+ E G + + A + EK EI++ ++ K +++++ +KL I + D
Sbjct: 158 AEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 217
Query: 186 LPKYEEQLELKIAK-AQLEE-LKK--DALEAMETQKKR---EEFKDEEMVEVKS 232
L + EE+ EL +K A+LEE LK + L+++E Q ++ +E K EE ++V S
Sbjct: 218 LERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS 271
>UNIPROTKB|F1P9F8 [details] [associations]
symbol:GCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 CTD:9648 OMA:CQIEASA EMBL:AAEX03007399
RefSeq:XP_531770.3 Ensembl:ENSCAFT00000003208 GeneID:474541
KEGG:cfa:474541 Uniprot:F1P9F8
Length = 1681
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 54/230 (23%), Positives = 101/230 (43%)
Query: 15 CSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFETALGVLRKEKITIAP 74
C L R H + F ++ + L E L++ L++K E LR E +
Sbjct: 822 CEELRSLLRDHE-QEKVFLSKELEEILSHKEGLQSDLLEMKNANEK----LRLENQNLLS 876
Query: 75 EDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERGLID 134
+ A + + +T E+ E + + ++E + A + + R LL LK+ E+ I
Sbjct: 877 QVEEASQKLCSKNETHEEEQIFAKELENLRLSLEQKEAELQNVRAQLLLLKDSLEKSPI- 935
Query: 135 EHGAEAMMMDALEKV---EKEIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEE 191
E+ +++ + EK+ EKE K+ + +K L A K K+L K++ E
Sbjct: 936 ENDQPSLLKELEEKIGYLEKESKE---KEEKINKIKLVAV--KAKKELDSSKKEAQTLRE 990
Query: 192 QLE-LKIAKAQLEELKKDALEAMETQKKR--EEFKDEEMVEVKSLDVRNF 238
+L+ ++ K QL +D ++ E+ K E K E ++++ NF
Sbjct: 991 ELDSVRSEKDQLSTSMRDLIQGAESYKNLLLEYDKQSEQLDLEKERANNF 1040
>UNIPROTKB|Q5KR49 [details] [associations]
symbol:TPM1 "Tropomyosin alpha-1 chain" species:9913 "Bos
taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
GO:GO:0005737 GO:GO:0005856 InterPro:IPR000533 Pfam:PF00261
PRINTS:PR00194 PROSITE:PS00326 EMBL:AB198070 EMBL:BC102909
IPI:IPI00708322 RefSeq:NP_001013608.1 UniGene:Bt.109484 HSSP:P42639
ProteinModelPortal:Q5KR49 SMR:Q5KR49 IntAct:Q5KR49 STRING:Q5KR49
PRIDE:Q5KR49 GeneID:281544 KEGG:bta:281544 CTD:7168
eggNOG:NOG304012 HOGENOM:HOG000231521 HOVERGEN:HBG107404
InParanoid:Q5KR49 KO:K10373 OrthoDB:EOG4TXBSM NextBio:20805496
Uniprot:Q5KR49
Length = 284
Score = 109 (43.4 bits), Expect = 0.00077, P = 0.00077
Identities = 59/221 (26%), Positives = 107/221 (48%)
Query: 21 LQRQHAISVRFFANEAAPQALKG-DEMLKNIFLDVKKKFETALGVLRKEKITIAPEDPAA 79
L +++A+ R EA +A + + L++ + ++KK + L +K + A +D
Sbjct: 13 LDKENALD-RAEQAEADKKAAEDRSKQLEDELVSLQKKLKATEDEL--DKYSEALKDAQE 69
Query: 80 VSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERGLIDEHGAE 139
+ A T E AD+ S ++RI E T L L+E + E G +
Sbjct: 70 KLELAEKKATDAE-ADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK 128
Query: 140 AMMMDALEKVEK-EIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEEQLELKIA 198
+ A + EK EI++ ++ K +++++ +KL I + DL + EE+ EL
Sbjct: 129 VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEG 188
Query: 199 K-AQLEE-LKK--DALEAMETQKKR---EEFKDEEMVEVKS 232
K A+LEE LK + L+++E Q ++ +E K EE ++V S
Sbjct: 189 KCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS 229
>UNIPROTKB|F2Z5B6 [details] [associations]
symbol:TPM1 "Tropomyosin alpha-1 chain" species:9823 "Sus
scrofa" [GO:0045214 "sarcomere organization" evidence=IEA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032059 "bleb" evidence=IEA] [GO:0008092 "cytoskeletal protein
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] GO:GO:0001701
GO:GO:0030016 GO:GO:0031941 GO:GO:0060048 GO:GO:0055010
InterPro:IPR000533 Pfam:PF00261 PRINTS:PR00194 PROSITE:PS00326
GeneTree:ENSGT00550000074494 OMA:EASAEKY GO:GO:0003065
EMBL:CU442742 ProteinModelPortal:F2Z5B6 SMR:F2Z5B6 PRIDE:F2Z5B6
Ensembl:ENSSSCT00000005049 Uniprot:F2Z5B6
Length = 284
Score = 109 (43.4 bits), Expect = 0.00077, P = 0.00077
Identities = 59/221 (26%), Positives = 107/221 (48%)
Query: 21 LQRQHAISVRFFANEAAPQALKG-DEMLKNIFLDVKKKFETALGVLRKEKITIAPEDPAA 79
L +++A+ R EA +A + + L++ + ++KK + L +K + A +D
Sbjct: 13 LDKENALD-RAEQAEADKKAAEDRSKQLEDELVSLQKKLKATEDEL--DKYSEALKDAQE 69
Query: 80 VSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERGLIDEHGAE 139
+ A T E AD+ S ++RI E T L L+E + E G +
Sbjct: 70 KLELAEKKATDAE-ADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK 128
Query: 140 AMMMDALEKVEK-EIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEEQLELKIA 198
+ A + EK EI++ ++ K +++++ +KL I + DL + EE+ EL
Sbjct: 129 VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEG 188
Query: 199 K-AQLEE-LKK--DALEAMETQKKR---EEFKDEEMVEVKS 232
K A+LEE LK + L+++E Q ++ +E K EE ++V S
Sbjct: 189 KCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.338 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 239 239 0.00092 113 3 10 23 0.45 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 581 (62 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.97u 0.08s 42.05t Elapsed: 00:00:22
Total cpu time: 41.97u 0.08s 42.05t Elapsed: 00:00:22
Start: Fri May 10 11:01:17 2013 End: Fri May 10 11:01:39 2013