BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026387
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4R599|TSNAX_MACFA Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2
SV=1
Length = 290
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 75/234 (32%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIF------------------------- 90
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 91 -----QV--------------------QEYVEAATFCKFCRTGTLLDLEELNAGLL---- 121
QV QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 RQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTD 157
Query: 122 --------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKI 168
P SD E L++ DYLLG+ADLTGELMR+ I + +G+++ ++
Sbjct: 158 DNGKENKTPSSDTQDEQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEV 217
Query: 169 CRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 219
+F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 218 SQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q9JHB5|TSNAX_RAT Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1
SV=1
Length = 290
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 75/234 (32%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIF------------------------- 90
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF
Sbjct: 38 AFKSFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESESKLDGV 97
Query: 91 -----QV--------------------QEYVEAATFCKFCRTGTLLDLEELNAGLLPLSD 125
QV QEYVEA +F F RT +L+ +EE+N L +D
Sbjct: 98 RQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQLTFTTD 157
Query: 126 PAIEP-----------------LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKI 168
+ + L+I DYLLG+ADLTGELMR+ I + +G+++ ++
Sbjct: 158 DSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEV 217
Query: 169 CRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 219
+F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 218 SQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLSKVENACYALKVRGSE 266
>sp|Q5RC21|TSNAX_PONAB Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1
Length = 290
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 75/234 (32%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIF------------------------- 90
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 91 -----QV--------------------QEYVEAATFCKFCRTGTLLDLEELNAGLL---- 121
QV QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 RQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTE 157
Query: 122 --------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKI 168
P SD + L++ DYLLG+ADLTGELMR+ I + +G+++ ++
Sbjct: 158 DNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEV 217
Query: 169 CRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 219
+F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 218 SQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q99598|TSNAX_HUMAN Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1
Length = 290
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 75/234 (32%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIF------------------------- 90
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 91 -----QV--------------------QEYVEAATFCKFCRTGTLLDLEELNAGLL---- 121
QV QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 RQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTE 157
Query: 122 --------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKI 168
P SD + L++ DYLLG+ADLTGELMR+ I + +G+++ ++
Sbjct: 158 DNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEV 217
Query: 169 CRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 219
+F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 218 SQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1
Length = 290
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 75/234 (32%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIF------------------------- 90
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESESKLDGV 97
Query: 91 -----QV--------------------QEYVEAATFCKFCRTGTLLDLEELNAGLLPLSD 125
QV QEYVEA +F F +T +L+ +EE+N L ++
Sbjct: 98 RQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFTAE 157
Query: 126 --------PAIEP---------LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKI 168
P E L++ DYLLG+ADLTGELMR+ I + +G+++ ++
Sbjct: 158 DSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEV 217
Query: 169 CRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 219
+F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 218 SQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|O74955|TSNAX_SCHPO Translin-associated protein X homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC736.09c PE=3 SV=1
Length = 231
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 64/225 (28%)
Query: 53 MKDAFANYAGYLNELNEKRERVVKSSRDITINSKKV-----------------------I 89
M++ F ++ +L E +KRE++++ SR+ITI SK++ I
Sbjct: 1 MEEEFLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSI 60
Query: 90 FQ-----------------------------VQEYVEAATFCKFCRTGTLLDLEELNAGL 120
F+ +QEYVEA TF + +TGTLL +
Sbjct: 61 FEKKIHKELESLKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLSCK------ 114
Query: 121 LPLSDPAIEPLQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKICRFSRDIYRELT 180
D + + IN DY+LG+ D+TGE+MR + S ++ + +F R +++ +
Sbjct: 115 ----DSSFR-ISINFIDYVLGVCDMTGEIMRFLVTNGSKFSVQQLTQQVKFLRGLHKNCS 169
Query: 181 LVVPLMDN-NSDMKTKMDTMLQSVLKIENACLSVHVRGSEYTLLG 224
+ L S+++ K+ M S+ K+E C S +R ++ L
Sbjct: 170 EIEHLPSKVKSELQQKLSVMENSISKVEGICYSKILREADKRYLN 214
>sp|P79769|TSN_CHICK Translin OS=Gallus gallus GN=TSN PE=1 SV=1
Length = 229
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 90 FQVQEYVEAATFCKFCRTGTLLDLEELNAGLLPLSDPAIEPLQINVFDYLLGLADLTGEL 149
F +Q V A+F + T TL+ E + A +L + +++ DYL G+ L EL
Sbjct: 93 FVLQRLVFLASFVVYLETETLVTREAV-AEILGIEADRERGFHLDIEDYLSGVLTLASEL 151
Query: 150 MRLAIGRISDGELEFAEKICRFSRDI---YRELTLVVPLMDNNSDMKTKMDTMLQSVLKI 206
RLA+ ++ G+ +I F ++ +R L L N ++ + D + V KI
Sbjct: 152 ARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNL------KNDSLRKRYDGLKYDVKKI 205
Query: 207 ENACLSVHVRG 217
E + +RG
Sbjct: 206 EEVVYDLSIRG 216
>sp|O31046|LEU1_STRCO 2-isopropylmalate synthase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=leuA PE=3 SV=2
Length = 573
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 157 ISDGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIEN 208
+D EL+FA ++C D Y RE+ L +P S T D M +++ + E+
Sbjct: 188 FTDTELDFALEVCEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRREH 247
Query: 209 ACLSVHVRGSEYTLLGSSDPSFLMG 233
CLSVH T + +++ + + G
Sbjct: 248 VCLSVHPHNDRGTAVAAAELALMAG 272
>sp|Q82BV3|LEU1_STRAW 2-isopropylmalate synthase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=leuA PE=3 SV=1
Length = 573
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 158 SDGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIENA 209
+D EL+FA ++C D++ RE+ L +P S T D M +++ + E
Sbjct: 189 TDTELDFALEVCEAVMDVWQPGPDREIILNLPATVERSTPSTHADRFEWMSRNLSRREYV 248
Query: 210 CLSVHVRGSEYTLLGSSDPSFLMG 233
CLSVH T + +++ + + G
Sbjct: 249 CLSVHPHNDRGTAVAAAELALMAG 272
>sp|Q47RM9|LEU1_THEFY 2-isopropylmalate synthase OS=Thermobifida fusca (strain YX)
GN=leuA PE=3 SV=1
Length = 568
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 159 DGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIENAC 210
D ELEFA ++C D+Y RE+ L +P + D M +++ + E C
Sbjct: 189 DTELEFALEVCEAVMDVYQPGPDREIILNLPATVERATPNVYADQIEWMSRNLSRREYVC 248
Query: 211 LSVHVRGSEYTLLGSSDPSFLMG 233
LSVH T + +++ + + G
Sbjct: 249 LSVHPHNDRGTAVAAAELAVMAG 271
>sp|Q57639|Y175_METJA Uncharacterized protein MJ0175 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0175 PE=4 SV=1
Length = 222
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 137 DYLLGLADLTGELMRLAIGRISDGELEFAEKICRFSRDIY 176
+Y+LGLAD+ GEL R + + + L E+ +F D+Y
Sbjct: 127 NYILGLADVIGELRREVLEAMKNDNLAEVERYFKFMEDLY 166
>sp|B9DNV8|GPDA_STACT Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus
carnosus (strain TM300) GN=gpsA PE=3 SV=1
Length = 332
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 41 AKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVQEYVEAAT 100
A+ ++IT S + +A YL L K R V + D ++SKKV V + +E AT
Sbjct: 53 AQLDKSITATSNLNEAINFSDTYLIALPTKAIREVIKNIDSQLDSKKVFIHVAKGIENAT 112
Query: 101 FCKFCRTGTLLDLEELNAGLLPLSDPA 127
F + E N G+ LS P+
Sbjct: 113 FKRVSEMIEDSLSPEHNGGIGVLSGPS 139
>sp|A5VZT5|SYP_PSEP1 Proline--tRNA ligase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=proS PE=3 SV=1
Length = 571
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 HRLHQLSGTALQSIAKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSS 78
H L+++ T L+ +A P + TE+ ++DA AG L LN E ++ S
Sbjct: 300 HELNEIKATKLEQVAD-PLVMATEAELRDAIGAGAGSLGPLNLPLEIIIDRS 350
>sp|Q88NK2|SYP_PSEPK Proline--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=proS
PE=3 SV=1
Length = 571
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 HRLHQLSGTALQSIAKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSS 78
H L+++ T L+ +A P + TE+ ++DA AG L LN E ++ S
Sbjct: 300 HELNEIKATKLEQVAD-PLVMATEAELRDAIGAGAGSLGPLNLPLEIIIDRS 350
>sp|Q9LVR4|U496F_ARATH UPF0496 protein At5g66660 OS=Arabidopsis thaliana GN=At5g66660 PE=2
SV=1
Length = 398
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 23 KSKTHRLHQLSGTALQSIAKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSSRDIT 82
KS LHQ + + S+A R T +S D+ G+L ELN+ RV+ SR+
Sbjct: 56 KSFDSSLHQRTNIIITSLAARAET---QSLNLDSLMEVYGFLLELNQNAVRVIIESREDV 112
Query: 83 INSKKVIFQVQEYVEAAT-FCKFCRT 107
+K + V Y ++ + FC T
Sbjct: 113 WKNKDLKSLVDVYFKSTSKTLDFCNT 138
>sp|P41556|RPOA1_METVS DNA-directed RNA polymerase subunit A' OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=rpoA1 PE=3 SV=1
Length = 889
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 130 PLQINVFDYLLGLADLTGELMRLAIGRISD-----GELEFAEKICR--FSRDIYRELTLV 182
P+ + D LG+ D G + + GR+ G +E ++ + F++DIY+ L V
Sbjct: 43 PIDGGLMDTRLGVID-PGLVCKSCSGRVGTCPGHFGHIELSKSVIHIGFAKDIYKLLKAV 101
Query: 183 VPLMDNNSDMKTKMDTMLQSVLKIE 207
P + + K D L+ +LK+E
Sbjct: 102 CPHCGKVTVTEIKRDEYLEKMLKLE 126
>sp|A9KT72|PEPT_CLOPH Peptidase T OS=Clostridium phytofermentans (strain ATCC 700394 /
DSM 18823 / ISDg) GN=pepT PE=3 SV=1
Length = 407
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 167 KICRFSRDIYRELTLVVPLMDNNSDMKTKMDTMLQSVLKIENACLSVHVRGSEYTLLGSS 226
K+C F + Y + T + DN +MK K++ + V + + A ++ + + + G +
Sbjct: 298 KVCEFLNEKYGQDTFSAEIKDNYYNMKEKVEPHMHLVDRAKEAMEALEITPTVVPIRGGT 357
Query: 227 DPSFL--MGVP 235
D + L MG+P
Sbjct: 358 DGARLSFMGLP 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,541,187
Number of Sequences: 539616
Number of extensions: 2978553
Number of successful extensions: 7732
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7700
Number of HSP's gapped (non-prelim): 30
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)