Your job contains 1 sequence.
>026388
MTDPNLYLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSW
KSMEMEIQSLLEKLLDINDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNIN
SMREHAELLSSVRDDISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLG
SQRALFGDVQGKVKVLSDKFPIIRGLLGSIRRRRSRDTLILAAVIAGCTLFLIIYWLSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026388
(239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2R812 - symbol:GOSR1 "Golgi SNAP receptor comp... 346 1.6e-31 1
MGI|MGI:1858260 - symbol:Gosr1 "golgi SNAP receptor compl... 345 2.0e-31 1
UNIPROTKB|Q2TBU3 - symbol:GOSR1 "Golgi SNAP receptor comp... 343 3.3e-31 1
UNIPROTKB|E9PCW1 - symbol:GOSR1 "Golgi SNAP receptor comp... 343 3.3e-31 1
UNIPROTKB|K7GKB9 - symbol:LOC100517676 "Golgi SNAP recept... 341 5.4e-31 1
ZFIN|ZDB-GENE-050417-133 - symbol:gosr1 "golgi SNAP recep... 340 6.9e-31 1
UNIPROTKB|O08522 - symbol:GOSR1 "Golgi SNAP receptor comp... 339 8.8e-31 1
RGD|71093 - symbol:Gosr1 "golgi SNAP receptor complex mem... 339 8.8e-31 1
UNIPROTKB|O95249 - symbol:GOSR1 "Golgi SNAP receptor comp... 338 1.1e-30 1
UNIPROTKB|F1RN67 - symbol:LOC100517676 "Uncharacterized p... 337 1.4e-30 1
UNIPROTKB|G5E571 - symbol:GOSR1 "Golgi SNAP receptor comp... 328 1.3e-29 1
UNIPROTKB|F1NW80 - symbol:GOSR1 "Golgi SNAP receptor comp... 322 5.6e-29 1
UNIPROTKB|G5E9T8 - symbol:GOSR1 "Golgi SNAP receptor comp... 321 7.1e-29 1
TAIR|locus:2036194 - symbol:GOS11 "AT1G15880" species:370... 300 1.2e-26 1
UNIPROTKB|K7EJC8 - symbol:GOSR1 "Golgi SNAP receptor comp... 291 1.1e-25 1
FB|FBgn0044871 - symbol:Gos28 "Gos28" species:7227 "Droso... 281 1.2e-24 1
WB|WBGene00017273 - symbol:gos-28 species:6239 "Caenorhab... 269 2.3e-23 1
UNIPROTKB|J3KST5 - symbol:GOSR1 "Golgi SNAP receptor comp... 265 6.1e-23 1
UNIPROTKB|B4DQA8 - symbol:GOSR1 "Golgi SNAP receptor comp... 244 1.0e-20 1
UNIPROTKB|G4MSD1 - symbol:MGG_04454 "Golgi SNAP receptor ... 197 9.8e-16 1
DICTYBASE|DDB_G0283831 - symbol:DDB_G0283831 "Golgi SNAP ... 169 9.1e-13 1
SGD|S000001023 - symbol:GOS1 "v-SNARE protein involved in... 167 1.5e-12 1
CGD|CAL0003205 - symbol:orf19.6551 species:5476 "Candida ... 161 6.4e-12 1
UNIPROTKB|F6RU00 - symbol:GOSR1 "Golgi SNAP receptor comp... 90 0.00066 1
>UNIPROTKB|E2R812 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9615 "Canis lupus familiaris" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109
GO:GO:0016021 GO:GO:0000139 GO:GO:0015031 GO:GO:0006888
GO:GO:0042147 GO:GO:0005801 KO:K08495 PANTHER:PTHR21094 CTD:9527
GeneTree:ENSGT00390000008688 OMA:INDKMAE EMBL:AAEX03006683
RefSeq:XP_548305.3 ProteinModelPortal:E2R812
Ensembl:ENSCAFT00000030211 GeneID:491185 KEGG:cfa:491185
NextBio:20864067 Uniprot:E2R812
Length = 250
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 84/239 (35%), Positives = 133/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGG--------YVDTGSPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ G Y +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSGARDGRRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + +Q K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGVCTILLLLY 247
>MGI|MGI:1858260 [details] [associations]
symbol:Gosr1 "golgi SNAP receptor complex member 1"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO;IDA] [GO:0005484 "SNAP receptor activity"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005801 "cis-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0042147 "retrograde transport,
endosome to Golgi" evidence=ISO] InterPro:IPR023601
PIRSF:PIRSF027109 MGI:MGI:1858260 GO:GO:0016021 GO:GO:0000139
GO:GO:0015031 GO:GO:0006888 EMBL:CH466596 GO:GO:0005801
EMBL:BX000359 HOGENOM:HOG000207760 KO:K08495 PANTHER:PTHR21094
eggNOG:NOG321250 CTD:9527 HOVERGEN:HBG051764 OrthoDB:EOG441QCB
GeneTree:ENSGT00390000008688 OMA:INDKMAE EMBL:AF079901
EMBL:AK133836 EMBL:AK134515 EMBL:AK147799 EMBL:AK154972
EMBL:AK161386 EMBL:BC008542 IPI:IPI00132923 IPI:IPI00313559
RefSeq:NP_058090.2 UniGene:Mm.20931 ProteinModelPortal:O88630
IntAct:O88630 STRING:O88630 PhosphoSite:O88630 PaxDb:O88630
PRIDE:O88630 Ensembl:ENSMUST00000010536 GeneID:53334 KEGG:mmu:53334
InParanoid:O88630 NextBio:310165 CleanEx:MM_GOSR1
Genevestigator:O88630 GermOnline:ENSMUSG00000010392 Uniprot:O88630
Length = 250
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 84/239 (35%), Positives = 133/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTG--------SPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ G D G +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FTAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>UNIPROTKB|Q2TBU3 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9913 "Bos taurus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 GO:GO:0016021 GO:GO:0000139 GO:GO:0015031
GO:GO:0006888 GO:GO:0005801 HOGENOM:HOG000207760 KO:K08495
PANTHER:PTHR21094 eggNOG:NOG321250 EMBL:BC109657 IPI:IPI00713460
RefSeq:NP_001033614.1 UniGene:Bt.14294 STRING:Q2TBU3 PRIDE:Q2TBU3
GeneID:511030 KEGG:bta:511030 CTD:9527 HOVERGEN:HBG051764
InParanoid:Q2TBU3 OrthoDB:EOG441QCB NextBio:20869732 Uniprot:Q2TBU3
Length = 250
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 84/239 (35%), Positives = 133/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGG--------YVDTGSPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ Y +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L IND M+ +SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FVAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + +Q K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGVCTILLLLY 247
>UNIPROTKB|E9PCW1 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109
GO:GO:0016021 GO:GO:0000139 GO:GO:0015031 GO:GO:0006888
GO:GO:0005801 EMBL:AC006050 KO:K08495 PANTHER:PTHR21094 CTD:9527
EMBL:AC011840 RefSeq:NP_001007026.1 UniGene:Hs.462680 GeneID:9527
KEGG:hsa:9527 HGNC:HGNC:4430 GenomeRNAi:9527 NextBio:35708
IPI:IPI00477701 ProteinModelPortal:E9PCW1 PRIDE:E9PCW1
Ensembl:ENST00000451249 UCSC:uc002hfd.3 ArrayExpress:E9PCW1
Bgee:E9PCW1 Uniprot:E9PCW1
Length = 248
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 85/239 (35%), Positives = 133/239 (55%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARF----TQGGYVDTGSPTV---GSG--RSWK 61
S WE+LRK+AR++E +LD+KL S++KL + T+ G D+ T GS R ++
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFE 66
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 67 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 126
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 127 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 186
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 187 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 245
>UNIPROTKB|K7GKB9 [details] [associations]
symbol:LOC100517676 "Golgi SNAP receptor complex member 1"
species:9823 "Sus scrofa" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0005801
"cis-Golgi network" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 PANTHER:PTHR21094 GeneTree:ENSGT00390000008688
EMBL:FP102529 Ensembl:ENSSSCT00000036665 Uniprot:K7GKB9
Length = 248
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 83/237 (35%), Positives = 132/237 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQG----GYVDTGSPTV---GSG--RSWKSM 63
WE+LRK+AR++E +LD+KL S++KL ++ G D+ T GS R +++M
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDSSDTTPLLNGSSQDRMFETM 68
Query: 64 EMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGNIN 120
+EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 AIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFV 128
Query: 121 SMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTRTV 178
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 AIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKEN 188
Query: 179 LGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + +Q K+ L+++FP D+LIL V+ CT+ L++Y
Sbjct: 189 MTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVVGICTILLLLY 245
>ZFIN|ZDB-GENE-050417-133 [details] [associations]
symbol:gosr1 "golgi SNAP receptor complex member 1"
species:7955 "Danio rerio" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109
ZFIN:ZDB-GENE-050417-133 GO:GO:0016021 GO:GO:0000139 GO:GO:0015031
GO:GO:0006888 GO:GO:0005801 PANTHER:PTHR21094
GeneTree:ENSGT00390000008688 EMBL:CR524483 IPI:IPI00851439
PRIDE:E9QCD0 Ensembl:ENSDART00000135677 ArrayExpress:E9QCD0
Bgee:E9QCD0 Uniprot:E9QCD0
Length = 250
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/235 (35%), Positives = 130/235 (55%)
Query: 15 ELRKEARKIEGDLDVKLSSYAKLGARFTQ---GGYVDTGSPTVG------SGRSWKSMEM 65
+LRK+AR++E +LD+KL S++KL ++ G D+ S T R +++M +
Sbjct: 13 DLRKQARQLENELDLKLVSFSKLCTSYSSSRDGRRGDSSSDTTPLLCNSTQDRMFETMSV 72
Query: 66 EIQSLLEKLLDINDAMSRCAASAAPTT---SVTQKLARHRDILHEFTQEFRRIKGNINSM 122
EI+ LL KL +ND M+ ++ T+ ++ L RHRDIL ++T EF + K N ++
Sbjct: 73 EIEQLLAKLTGVNDKMAEYTSTPGVTSLNAALMHTLQRHRDILQDYTHEFHKTKSNFMAI 132
Query: 123 REHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTRTVLG 180
RE +LL SVR DI YK+ SG + R ++ L+E + S IDD IS A T+ +
Sbjct: 133 REREDLLGSVRKDIETYKSGSGVNNRRTELFLKEHEHLRNSDRLIDDTISIAMATKENMT 192
Query: 181 SQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
SQR L +Q +V L+++FP D+LIL VI CT+ L++Y
Sbjct: 193 SQRGLLKSIQSRVNTLANRFPAINNLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>UNIPROTKB|O08522 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:10029 "Cricetulus griseus" [GO:0000138 "Golgi trans
cisterna" evidence=IDA] [GO:0005484 "SNAP receptor activity"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=IDA] InterPro:IPR023601 PIRSF:PIRSF027109 GO:GO:0016021
GO:GO:0000139 GO:GO:0015031 GO:GO:0006888 GO:GO:0006891
GO:GO:0000138 GO:GO:0005801 GO:GO:0005484 PANTHER:PTHR21094
CTD:9527 HOVERGEN:HBG051764 EMBL:U49841 RefSeq:NP_001233674.1
GeneID:100689312 Uniprot:O08522
Length = 250
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 84/239 (35%), Positives = 133/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQ-----GG---YVDTGSPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ GG Y +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>RGD|71093 [details] [associations]
symbol:Gosr1 "golgi SNAP receptor complex member 1" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA;ISO]
[GO:0005484 "SNAP receptor activity" evidence=IEA;ISO] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005801 "cis-Golgi network"
evidence=IDA;TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA;ISO] InterPro:IPR023601 PIRSF:PIRSF027109 RGD:71093
GO:GO:0016021 GO:GO:0005794 GO:GO:0000139 GO:GO:0015031
GO:GO:0006888 GO:GO:0042147 GO:GO:0005801 HOGENOM:HOG000207760
KO:K08495 PANTHER:PTHR21094 eggNOG:NOG321250 CTD:9527
HOVERGEN:HBG051764 OrthoDB:EOG441QCB GeneTree:ENSGT00390000008688
OMA:INDKMAE EMBL:U49099 EMBL:BC126068 IPI:IPI00210219
RefSeq:NP_446036.1 UniGene:Rn.8228 MINT:MINT-4569995 STRING:Q62931
PhosphoSite:Q62931 PRIDE:Q62931 Ensembl:ENSRNOT00000005283
GeneID:94189 KEGG:rno:94189 InParanoid:Q62931 NextBio:617838
Genevestigator:Q62931 GermOnline:ENSRNOG00000003971 Uniprot:Q62931
Length = 250
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 84/239 (35%), Positives = 133/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQ-----GG---YVDTGSPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ GG Y +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>UNIPROTKB|O95249 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0031201
"SNARE complex" evidence=TAS] [GO:0005484 "SNAP receptor activity"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] InterPro:IPR023601
PIRSF:PIRSF027109 GO:GO:0016021 GO:GO:0005794 GO:GO:0000139
GO:GO:0015031 GO:GO:0006888 GO:GO:0006891 GO:GO:0031201
GO:GO:0042147 GO:GO:0005801 GO:GO:0005484 EMBL:AC006050
HOGENOM:HOG000207760 KO:K08495 PANTHER:PTHR21094 eggNOG:NOG321250
CTD:9527 HOVERGEN:HBG051764 OrthoDB:EOG441QCB OMA:INDKMAE
EMBL:AF047438 EMBL:AF073926 EMBL:AC011840 EMBL:BC040471
IPI:IPI00029447 RefSeq:NP_001007025.1 RefSeq:NP_001007026.1
RefSeq:NP_004862.1 UniGene:Hs.462680 ProteinModelPortal:O95249
IntAct:O95249 STRING:O95249 PhosphoSite:O95249 PaxDb:O95249
PRIDE:O95249 Ensembl:ENST00000225724 GeneID:9527 KEGG:hsa:9527
UCSC:uc002hfe.3 GeneCards:GC17P028804 HGNC:HGNC:4430 HPA:HPA020590
MIM:604026 neXtProt:NX_O95249 PharmGKB:PA28815 InParanoid:O95249
PhylomeDB:O95249 GenomeRNAi:9527 NextBio:35708 ArrayExpress:O95249
Bgee:O95249 CleanEx:HS_GOSR1 Genevestigator:O95249
GermOnline:ENSG00000108587 Uniprot:O95249
Length = 250
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 85/241 (35%), Positives = 134/241 (55%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARF----TQGG----YVDTGSPTV-GSG--RS 59
S WE+LRK+AR++E +LD+KL S++KL + T+ G Y +P + GS R
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRM 66
Query: 60 WKSMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIK 116
+++M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K
Sbjct: 67 FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTK 126
Query: 117 GNINSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQT 174
N ++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A
Sbjct: 127 ANFMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 186
Query: 175 TRTVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLII 234
T+ + SQR + + K+ L+++FP D+LIL VI CT+ L++
Sbjct: 187 TKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLL 246
Query: 235 Y 235
Y
Sbjct: 247 Y 247
>UNIPROTKB|F1RN67 [details] [associations]
symbol:LOC100517676 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109 GO:GO:0016021
GO:GO:0000139 GO:GO:0006888 GO:GO:0042147 GO:GO:0005801 KO:K08495
PANTHER:PTHR21094 GeneTree:ENSGT00390000008688 OMA:INDKMAE
EMBL:FP102529 RefSeq:XP_003131835.2 Ensembl:ENSSSCT00000030283
GeneID:100517676 KEGG:ssc:100517676 Uniprot:F1RN67
Length = 250
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 82/239 (34%), Positives = 132/239 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGG--------YVDTGSPTV-GSG--RSWK 61
WE+LRK+AR++E +LD+KL S++KL ++ Y +P + GS R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFE 68
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTR 176
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 129 FVAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188
Query: 177 TVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + +Q K+ L+++FP D+LIL V+ CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVVGICTILLLLY 247
>UNIPROTKB|G5E571 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9913 "Bos taurus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109
GO:GO:0016021 GO:GO:0000139 GO:GO:0015031 GO:GO:0006888
GO:GO:0042147 GO:GO:0005801 PANTHER:PTHR21094
GeneTree:ENSGT00390000008688 OMA:INDKMAE EMBL:DAAA02048634
EMBL:DAAA02048635 Ensembl:ENSBTAT00000006525 Uniprot:G5E571
Length = 244
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 82/238 (34%), Positives = 132/238 (55%)
Query: 14 EELRKEARKIEGDLDVKLSSYAKLGARFTQGG--------YVDTGSPTV-GSG--RSWKS 62
++LRK+AR++E +LD+KL S++KL ++ Y +P + GS R +++
Sbjct: 4 KDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFET 63
Query: 63 MEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGNI 119
M +EI+ LL +L IND M+ +SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 64 MAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANF 123
Query: 120 NSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTRT 177
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 124 VAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKE 183
Query: 178 VLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + +Q K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 184 NMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGVCTILLLLY 241
>UNIPROTKB|F1NW80 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9031 "Gallus gallus" [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005484 "SNAP receptor activity"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109 GO:GO:0016021
GO:GO:0000139 GO:GO:0015031 GO:GO:0006888 GO:GO:0042147
GO:GO:0005801 PANTHER:PTHR21094 GeneTree:ENSGT00390000008688
OMA:INDKMAE EMBL:AADN02025826 IPI:IPI00575302
Ensembl:ENSGALT00000006898 Uniprot:F1NW80
Length = 242
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 82/233 (35%), Positives = 129/233 (55%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTV---GSG--RSWKSMEMEI 67
WE K+AR++E +LD+KL S++KL ++ G D+ T GS R +++M +EI
Sbjct: 9 WEG-EKQARQLENELDLKLVSFSKL-CTSSRDGRRDSSDTTPLLNGSSQDRMFETMAVEI 66
Query: 68 QSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGNINSMRE 124
+ LL KL IND M+ SA P+ ++ L RHRDIL ++T EF + K N ++RE
Sbjct: 67 EQLLGKLTGINDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFLAIRE 126
Query: 125 HAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTRTVLGSQ 182
LL SVR DI YK+ SG + R ++ L+E + S I++ IS A T+ + SQ
Sbjct: 127 RENLLGSVRKDIESYKSGSGVNNRRTELFLKEHEHLRNSDRLIEETISIAMATKENMTSQ 186
Query: 183 RALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
R + +Q K+ L+++FP D+ IL ++I CT+ L+++
Sbjct: 187 RGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSFILGSIIGICTILLLLF 239
>UNIPROTKB|G5E9T8 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 GO:GO:0016021 GO:GO:0000139 GO:GO:0006888
GO:GO:0005801 EMBL:AC006050 PANTHER:PTHR21094 EMBL:AC011840
HGNC:HGNC:4430 GenomeRNAi:9527 NextBio:35708 PRIDE:G5E9T8
Ensembl:ENST00000414833 ArrayExpress:G5E9T8 Bgee:G5E9T8
Uniprot:G5E9T8
Length = 255
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 82/237 (34%), Positives = 131/237 (55%)
Query: 15 ELRKEARKIEGDLDVKLSSYAKLGARF----TQGG----YVDTGSPTV-GSG--RSWKSM 63
+LRK+AR++E +LD+KL S++KL + T+ G Y +P + GS R +++M
Sbjct: 16 DLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETM 75
Query: 64 EMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGNIN 120
+EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 76 AIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFM 135
Query: 121 SMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTTRTV 178
++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A T+
Sbjct: 136 AIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKEN 195
Query: 179 LGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 196 MTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 252
>TAIR|locus:2036194 [details] [associations]
symbol:GOS11 "AT1G15880" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM;IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006944 "cellular
membrane fusion" evidence=RCA;IPI] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0000149 "SNARE binding" evidence=TAS]
[GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA;TAS] [GO:0005829 "cytosol" evidence=RCA] [GO:0006869
"lipid transport" evidence=RCA] [GO:0010351 "lithium ion transport"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR023601 PIRSF:PIRSF027109 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0000139 GO:GO:0015031
GO:GO:0006888 GO:GO:0005801 EMBL:AC034256 EMBL:AF357528
EMBL:AF332426 EMBL:AF410263 EMBL:AY093723 IPI:IPI00530103
PIR:C86293 RefSeq:NP_563985.1 UniGene:At.15574
ProteinModelPortal:Q9LMP7 IntAct:Q9LMP7 STRING:Q9LMP7 PaxDb:Q9LMP7
PRIDE:Q9LMP7 EnsemblPlants:AT1G15880.1 GeneID:838158
KEGG:ath:AT1G15880 GeneFarm:4295 TAIR:At1g15880 eggNOG:NOG243210
HOGENOM:HOG000207760 InParanoid:Q9LMP7 KO:K08495 OMA:MEDACRE
PhylomeDB:Q9LMP7 ProtClustDB:CLSN2687820 Genevestigator:Q9LMP7
GermOnline:AT1G15880 PANTHER:PTHR21094 Uniprot:Q9LMP7
Length = 223
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 73/230 (31%), Positives = 113/230 (49%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSL 70
S W+ LRK+ARKIE LD ++ SY +L V T + + G +E I L
Sbjct: 5 SSWDALRKQARKIEAQLDEQMHSYRRL---------VSTKALSKSDGNE-SDLEAGIDLL 54
Query: 71 LEKLLDINDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLS 130
L +L +N M +S + V+ L RH++IL + TQEF R + ++ + +EHA LL
Sbjct: 55 LRQLQQVNAQMQAWVSSGG-SEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLE 113
Query: 131 SVRD-DISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQRALFGDV 189
R+ D + +++E I+ + +D VISQAQ T L QR+ FG +
Sbjct: 114 DFREFDRTRLDLEDGYGSEQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGI 173
Query: 190 QGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYWLSK 239
K+ ++ + P DT+IL+ V A CT + IYW++K
Sbjct: 174 NSKLSNVASRLPTVNTILAAIKRKKSMDTIILSLVAAVCTFLIFIYWITK 223
>UNIPROTKB|K7EJC8 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109
EMBL:AC006050 PANTHER:PTHR21094 EMBL:AC011840 HGNC:HGNC:4430
Ensembl:ENST00000581721 Uniprot:K7EJC8
Length = 236
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 81/240 (33%), Positives = 128/240 (53%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARF----TQGG----YVDTGSPTV-GSG--RS 59
S WE+LRK+AR++E +LD+KL S++KL + T+ G Y +P + GS R
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRM 66
Query: 60 WKSMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIK 116
+++M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K
Sbjct: 67 FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTK 126
Query: 117 GNINSMREHAELLSSVRDDISEYKASGSMSPRMQI-LRERAAIHGSITHIDDVISQAQTT 175
N ++RE L+ SVR DI SG + R ++ L+E H + +I A T
Sbjct: 127 ANFMAIRERENLMGSVRKDID---GSGVNNRRTELFLKE----HDHLRNI------AMAT 173
Query: 176 RTVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
+ + SQR + + K+ L+++FP D+LIL VI CT+ L++Y
Sbjct: 174 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 233
>FB|FBgn0044871 [details] [associations]
symbol:Gos28 "Gos28" species:7227 "Drosophila melanogaster"
[GO:0005484 "SNAP receptor activity" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=ISS] [GO:0000138 "Golgi trans
cisterna" evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 EMBL:AE014297 GO:GO:0016021 GO:GO:0000139
GO:GO:0015031 GO:GO:0006888 GO:GO:0006891 GO:GO:0000138
GO:GO:0005801 GO:GO:0005484 KO:K08495 PANTHER:PTHR21094
eggNOG:NOG321250 GeneTree:ENSGT00390000008688 OMA:INDKMAE
EMBL:AY094935 RefSeq:NP_650739.2 UniGene:Dm.12874
ProteinModelPortal:Q9VE50 IntAct:Q9VE50 STRING:Q9VE50 PaxDb:Q9VE50
PRIDE:Q9VE50 EnsemblMetazoa:FBtr0083661 GeneID:248102
KEGG:dme:Dmel_CG7700 UCSC:CG7700-RA CTD:248102 FlyBase:FBgn0044871
InParanoid:Q9VE50 OrthoDB:EOG4K98V8 PhylomeDB:Q9VE50 ChiTaRS:GOSR1
GenomeRNAi:248102 NextBio:843451 Bgee:Q9VE50 GermOnline:CG7700
Uniprot:Q9VE50
Length = 232
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 80/233 (34%), Positives = 126/233 (54%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGY-----VDTGSPTVGSGRSWKSMEM 65
S ++ LRK+AR +E ++D+KL +++K+GA GG VDT SP +G + S+
Sbjct: 4 SSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDT-SPLLGE-HVFDSLSE 61
Query: 66 EIQSLLEKLLDINDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMR-E 124
EI+ +LEKL +N++MS AS A + L RHR+IL + QEF +I N ++MR E
Sbjct: 62 EIEQMLEKLSSLNESMSDLPASGA---AAMHTLQRHREILQGYRQEFNKICAN-HTMRIE 117
Query: 125 HAELL--SSVRDDISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQ 182
ELL S + SG ++ R L+E ++ + ++D I+ A TR L +Q
Sbjct: 118 REELLRGSGLATSSGSPSISG-LNRREMYLKESGHLNSASHLVNDQINIAIETRDHLHAQ 176
Query: 183 RALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIY 235
R F +Q + +S++FP+ D+LIL AVI C + L++Y
Sbjct: 177 RQAFKRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILLLLY 229
>WB|WBGene00017273 [details] [associations]
symbol:gos-28 species:6239 "Caenorhabditis elegans"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR023601 PIRSF:PIRSF027109 GO:GO:0016021
GO:GO:0000139 GO:GO:0015031 GO:GO:0006888 GO:GO:0005801
HOGENOM:HOG000207760 KO:K08495 PANTHER:PTHR21094 eggNOG:NOG321250
EMBL:FO081093 RefSeq:NP_498621.1 ProteinModelPortal:Q95ZW1
STRING:Q95ZW1 PaxDb:Q95ZW1 EnsemblMetazoa:F08F8.8 GeneID:176044
KEGG:cel:CELE_F08F8.8 UCSC:F08F8.8 CTD:176044 WormBase:F08F8.8
GeneTree:ENSGT00390000008688 InParanoid:Q95ZW1 OMA:INDKMAE
NextBio:890870 Uniprot:Q95ZW1
Length = 234
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 73/231 (31%), Positives = 119/231 (51%)
Query: 13 WEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGR-SWKSMEMEIQSLL 71
WE LRK+AR E +DVKL S KL A + GG+ D TV S + S+K++ EI+ L+
Sbjct: 5 WEALRKKARSTENSIDVKLVSLNKLTAS-SHGGF-DIDEKTVSSRQTSFKTVTTEIEGLI 62
Query: 72 EKLLDINDAMSRCA-----ASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMREHA 126
E+L +IND M+ A AS A ++ L RHR+IL ++ E+RR + N++ + +
Sbjct: 63 EQLTNINDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRE 122
Query: 127 ELLSSVRDDISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQRALF 186
LLSS ++ + + L+E I+ +D+ + A +T+ + Q
Sbjct: 123 LLLSSSNENRNNPILNNRARGYDMYLKENDHINACDRLLDEQLEMAMSTKENMARQGINL 182
Query: 187 GDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYWL 237
+ ++ +S K+P +TLILAAVI+ C +F I +W+
Sbjct: 183 RGISTRLHHISKKYPAINNLMQKIKTKKQKNTLILAAVISSCLIFTI-FWI 232
>UNIPROTKB|J3KST5 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 GO:GO:0016021 GO:GO:0000139 GO:GO:0006888
EMBL:CH471159 GO:GO:0005801 EMBL:AC006050 KO:K08495
PANTHER:PTHR21094 CTD:9527 EMBL:AC011840 RefSeq:NP_001007025.1
UniGene:Hs.462680 GeneID:9527 KEGG:hsa:9527 HGNC:HGNC:4430
ProteinModelPortal:J3KST5 Ensembl:ENST00000467337 Uniprot:J3KST5
Length = 185
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 62/181 (34%), Positives = 99/181 (54%)
Query: 60 WKSMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIK 116
+++M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K
Sbjct: 2 FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTK 61
Query: 117 GNINSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRERAAIHGSITHIDDVISQAQT 174
N ++RE L+ SVR DI YK+ SG + R ++ L+E + S I++ IS A
Sbjct: 62 ANFMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 121
Query: 175 TRTVLGSQRALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLII 234
T+ + SQR + + K+ L+++FP D+LIL VI CT+ L++
Sbjct: 122 TKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLL 181
Query: 235 Y 235
Y
Sbjct: 182 Y 182
>UNIPROTKB|B4DQA8 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR023601
GO:GO:0016021 GO:GO:0000139 GO:GO:0006888 GO:GO:0005801
EMBL:AC006050 HOGENOM:HOG000207760 PANTHER:PTHR21094
HOVERGEN:HBG051764 EMBL:AC011840 UniGene:Hs.462680 HGNC:HGNC:4430
EMBL:AK298714 IPI:IPI00942124 STRING:B4DQA8 Ensembl:ENST00000427274
Uniprot:B4DQA8
Length = 174
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 62/158 (39%), Positives = 95/158 (60%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARF----TQGGYVDTGSPTV---GSG--RSWK 61
S WE+LRK+AR++E +LD+KL S++KL + T+ G D+ T GS R ++
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFE 66
Query: 62 SMEMEIQSLLEKLLDINDAMSRCAASAA-PT--TSVTQKLARHRDILHEFTQEFRRIKGN 118
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 67 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 126
Query: 119 INSMREHAELLSSVRDDISEYKA-SGSMSPRMQI-LRE 154
++RE L+ SVR DI YK+ SG + R ++ L+E
Sbjct: 127 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKE 164
>UNIPROTKB|G4MSD1 [details] [associations]
symbol:MGG_04454 "Golgi SNAP receptor complex member 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR023601
PIRSF:PIRSF027109 GO:GO:0016021 GO:GO:0000139 GO:GO:0015031
GO:GO:0006888 EMBL:CM001232 GO:GO:0005801 KO:K08495
PANTHER:PTHR21094 RefSeq:XP_003713550.1 EnsemblFungi:MGG_04454T0
GeneID:2678152 KEGG:mgr:MGG_04454 Uniprot:G4MSD1
Length = 227
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 60/229 (26%), Positives = 101/229 (44%)
Query: 12 GWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSLL 71
GW LR +AR +E D + +Y+++ T PT + E ++ +L
Sbjct: 8 GWSTLRNQARTLEKDTEALFHTYSQIA---TSSNI--PAKPT----EQERETEARLREIL 58
Query: 72 EKLLDINDAMSRCAASAAPTTSVTQK---LARHRDILHEFTQEFRRIKGNINSMREHAEL 128
+K ++ ++R S + S + K LA RD L E +E R++ I R A L
Sbjct: 59 DKRENVIAQLTRLLDSDSDLASSSTKVRNLALFRDKLAEQRRELPRLRSRIQETRNRANL 118
Query: 129 LSSVRDDISEYKASGSMSPRMQ-ILRERAAIHGSITHIDDVISQAQTTRTVLGSQRALFG 187
LS+VR+DI Y+AS + +L ER+ I S + DDV+ QA SQR +
Sbjct: 119 LSNVRNDIDAYRASNPEQAEAEYMLDERSRIDNSHSMADDVLYQAYAINDNFNSQREMLA 178
Query: 188 DVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYW 236
+ ++ + + + P D +I+ + IA C ++W
Sbjct: 179 SINRRITLAASQVPGINTLMTRISAKKRRDGIIMGSFIAIC---FFVFW 224
>DICTYBASE|DDB_G0283831 [details] [associations]
symbol:DDB_G0283831 "Golgi SNAP receptor complex
member 1" species:44689 "Dictyostelium discoideum" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR023601
dictyBase:DDB_G0283831 GO:GO:0016021 GO:GO:0000139 GO:GO:0006888
EMBL:AAFI02000057 GO:GO:0005801 KO:K08495 PANTHER:PTHR21094
eggNOG:NOG321250 RefSeq:XP_638899.1 EnsemblProtists:DDB0185714
GeneID:8624296 KEGG:ddi:DDB_G0283831 InParanoid:Q54QH2 OMA:KSIQTRV
ProtClustDB:CLSZ2430332 Uniprot:Q54QH2
Length = 256
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 59/237 (24%), Positives = 98/237 (41%)
Query: 5 NLYLQESGWEELRKEARKIEGDLDVKLSSYAKLGARF-TQGGYVDTGSPTVGSGRSWKSM 63
NL + ++ + L+KE R++E +D KL+ + L + ++D + +
Sbjct: 37 NLAVNQNNLDSLKKERRRLESYIDSKLNHLSTLNDKVQADDEHIDIEYSKI----DLSDL 92
Query: 64 EMEIQSLLEKLLDINDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMR 123
E+ S + L ND + P S T K+ H+D L ++ E+RR+K NI S
Sbjct: 93 SSELDSAFKNLQRCNDMLVD-----DPNFS-TNKV--HKDKLDDYLNEYRRLKKNIKSTL 144
Query: 124 EHAELLSSVRDDISEY-KASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQ 182
E ELL S Y K + P +LRE + + S D ++ QA+ L +Q
Sbjct: 145 ESFELLEG-----STYNKNKDTEIPMTSLLREHSTLQSSSYVQDSILGQARQAHEALENQ 199
Query: 183 RALFGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYWLSK 239
R + K+ + F + ++L +I G FL Y L K
Sbjct: 200 RRILRGTSHKINTMPSLFQTIDGVTSKIKRYKQRNVVVLGLLIGGLICFLFYYSLKK 256
>SGD|S000001023 [details] [associations]
symbol:GOS1 "v-SNARE protein involved in Golgi transport"
species:4932 "Saccharomyces cerevisiae" [GO:0016021 "integral to
membrane" evidence=IEA;ISS;NAS] [GO:0006906 "vesicle fusion"
evidence=IDA] [GO:0005797 "Golgi medial cisterna" evidence=IDA]
[GO:0048193 "Golgi vesicle transport" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IDA] [GO:0031201 "SNARE complex"
evidence=IDA] InterPro:IPR023601 PIRSF:PIRSF027109 SGD:S000001023
GO:GO:0016021 GO:GO:0000139 GO:GO:0015031 EMBL:BK006934
GO:GO:0006888 GO:GO:0031201 GO:GO:0048193 EMBL:U11583 GO:GO:0005801
GO:GO:0005797 GO:GO:0005484 GO:GO:0006906 HOGENOM:HOG000207760
KO:K08495 PANTHER:PTHR21094 eggNOG:NOG321250 OrthoDB:EOG444PVQ
GeneTree:ENSGT00390000008688 PIR:S48937 RefSeq:NP_011832.1
ProteinModelPortal:P38736 DIP:DIP-2490N IntAct:P38736 STRING:P38736
PaxDb:P38736 EnsemblFungi:YHL031C GeneID:856354 KEGG:sce:YHL031C
CYGD:YHL031c OMA:ERNRNNL NextBio:981799 Genevestigator:P38736
GermOnline:YHL031C Uniprot:P38736
Length = 223
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/225 (25%), Positives = 99/225 (44%)
Query: 16 LRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLL 75
+R +A +E + LS Y+ F Q T S G K ++ +++ +L +
Sbjct: 10 IRGKAISLETQTESLLSKYST----FAQ----TTSSEQTGQE---KKIDKQLEGILGQRQ 58
Query: 76 DINDAMSR-CAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRD 134
D+ D++++ C ++ A + S +L RH++IL + + FR I+ +I R LL SV++
Sbjct: 59 DVIDSLTQICDSNPAISASKLSQLHRHKEILQDHWKSFRNIRSSIQQERNRLNLLFSVKN 118
Query: 135 DI--SEYKASGSMSPRMQILR-ERAAIHGSITHIDDVISQAQTTRTVLGSQRALFGDVQG 191
DI S A + + ++ E I S +D +ISQA TR+ SQ +
Sbjct: 119 DIANSTTDAPAPIGDADEYIQNETRRIDQSNNVVDRLISQAWETRSQFHSQSNVLNTANN 178
Query: 192 KVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYW 236
KV + P + +LA + C LFL W
Sbjct: 179 KVLQTLQRIPGVNQLIMKINTRRKKNAFVLATITTLCILFLFFTW 223
>CGD|CAL0003205 [details] [associations]
symbol:orf19.6551 species:5476 "Candida albicans" [GO:0031201
"SNARE complex" evidence=IEA] [GO:0005797 "Golgi medial cisterna"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0006906 "vesicle fusion" evidence=IEA] [GO:0048193 "Golgi
vesicle transport" evidence=IEA] InterPro:IPR023601
PIRSF:PIRSF027109 CGD:CAL0003205 GO:GO:0016021 GO:GO:0000139
GO:GO:0015031 GO:GO:0006888 EMBL:AACQ01000020 EMBL:AACQ01000016
GO:GO:0005801 HOGENOM:HOG000207760 KO:K08495 PANTHER:PTHR21094
eggNOG:NOG321250 RefSeq:XP_720874.1 RefSeq:XP_721387.1
RefSeq:XP_888795.1 STRING:Q5AGY7 GeneID:3637010 GeneID:3637452
GeneID:3704133 KEGG:cal:CaO19.13904 KEGG:cal:CaO19.6551
KEGG:cal:CaO19_6551 Uniprot:Q5AGY7
Length = 224
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 56/227 (24%), Positives = 98/227 (43%)
Query: 8 LQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEI 67
+ S + + R +A +E + LS +++ + Q S ++ + +I
Sbjct: 1 MSSSTFSQTRSQALSLEKQTEQLLSKFSQFQQQQQQNQ-----SQSLDITPEETIIRQQI 55
Query: 68 QSLLEKLLDINDAMSRCAASAAP--TTSVTQKLARHRDILHEFTQEFRRIKGNINSMREH 125
+ + +K + ++R + P +TS Q+L RH++ L++ F +I NI R
Sbjct: 56 EEIFQKRNAVISKLNRIS-EVEPNLSTSKLQQLTRHKEKLNDDNLSFTKIINNIEDERNK 114
Query: 126 AELLSSVRDDISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQRAL 185
LL +V DI+ +K ++ IL E ++ + D ++ A TR L +QR
Sbjct: 115 NNLLFNVHRDINHHKQQRNIDGNAYILEESERVNNVNSIADRLLQGAFATRDELLNQRQY 174
Query: 186 FGDVQGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFL 232
+ Q +V P DTLILA+VIA C LFL
Sbjct: 175 LNNAQSQVLSTMQNIPGLNVLISKINTRRKRDTLILASVIAICILFL 221
>UNIPROTKB|F6RU00 [details] [associations]
symbol:GOSR1 "Golgi SNAP receptor complex member 1"
species:9606 "Homo sapiens" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR023601
GO:GO:0016021 GO:GO:0000139 GO:GO:0006888 GO:GO:0005801
EMBL:AC006050 PANTHER:PTHR21094 EMBL:AC011840 HGNC:HGNC:4430
IPI:IPI00044920 Ensembl:ENST00000537788 UCSC:uc002hfc.1
Uniprot:F6RU00
Length = 81
Score = 90 (36.7 bits), Expect = 0.00066, P = 0.00066
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVD 48
S WE+LRK+AR++E +LD+KL S++KL ++ D
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRD 44
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 239 225 0.00077 113 3 11 22 0.39 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 603 (64 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.19u 0.22s 22.41t Elapsed: 00:00:01
Total cpu time: 22.20u 0.22s 22.42t Elapsed: 00:00:01
Start: Fri May 10 11:11:08 2013 End: Fri May 10 11:11:09 2013