BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026389
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus
GN=Apmap PE=1 SV=1
Length = 415
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 123/254 (48%), Gaps = 26/254 (10%)
Query: 7 PPPTTGSSSKRCVPVCSGIVLSCLLAFTL---QIFFFSPISPDLLLL--PPASSASLIPT 61
P GSS V + ++L+ LA L + SPI P PP L P
Sbjct: 25 PEVKEGSSFSGRVFRMTFLMLAVSLAIPLLGAMMLLESPIDPQSFSFKEPPFMFGVLHPN 84
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGGDTL-- 119
T ++ RL E L+GPE + V+ VL+T T DG + +L +NG E G
Sbjct: 85 TK-LRQAERLFENQLSGPESI-VNIGDVLFTGTADGRVVKL-ENGEIETIARFGSGPCKT 141
Query: 120 ----------LGITTTQENEILVCDADKGLLKVTEEGVTV---LASH--VNGSRINLADD 164
LGI + V DA KGL +V + +V L+S + G +++ +D
Sbjct: 142 RDDEPTCGRPLGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVND 201
Query: 165 LIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGV 223
L DG IYF+ +S+K+ ++ L ++EA G+LL+YD E +LLD L F NGV
Sbjct: 202 LTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGV 261
Query: 224 ALSKDEDYLVVCET 237
LS +ED+++V ET
Sbjct: 262 QLSPEEDFVLVAET 275
>sp|Q7TP48|APMAP_RAT Adipocyte plasma membrane-associated protein OS=Rattus norvegicus
GN=Apmap PE=2 SV=2
Length = 376
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 41 SPISPDLLLL--PPASSASLIPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGW 98
SPI P PP L P T ++ RL E LNGPE + V+ VL+T T DG
Sbjct: 23 SPIDPQSFSFKEPPFMFGVLQPNTK-LRQAERLFENQLNGPESI-VNIGDVLFTGTADGR 80
Query: 99 IKRLHKNGTWENWKLIGGDTL------------LGITTTQENEILVCDADKGLLKVTEEG 146
+ +L +NG E G LGI + V DA KGL +V +
Sbjct: 81 VVKL-ENGEIETIARFGSGPCKTRDDEPTCGRPLGIRVGPNGTLFVVDAYKGLFEVNPQK 139
Query: 147 VTV---LASH--VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKL 200
+V L+S + G +++ +DL DG IYF+ +S+K+ ++ L ++E G+L
Sbjct: 140 RSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRL 199
Query: 201 LKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
L+YD E +LLD L F NGV LS +ED+++V ET
Sbjct: 200 LEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAET 236
>sp|Q3T0E5|APMAP_BOVIN Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP
PE=2 SV=1
Length = 412
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 4 SSNPPPTTGSSSKRCVPVCSGIVLSCLLAFTLQ---IFFFSPISPDLLLL--PPASSASL 58
+ P GSS V + ++L+ L L + SPI P+ L PP L
Sbjct: 22 NRTPEAKGGSSFSGRVFRATFLMLAAFLTIPLLGALVLLDSPIDPEPLSFKEPPLFLGVL 81
Query: 59 IPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGGDT 118
P T +Q RL E L GPE + + V++T T DG + +L +NG E G
Sbjct: 82 QPNTK-LQQAERLFENQLVGPESIA-NIGDVMFTGTADGRVVKL-ENGEVETIARFGSGP 138
Query: 119 L------------LGITTTQENEILVCDADKGLLKVT--EEGVTVLASH---VNGSRINL 161
LGI + V DA KGL +V + V +L S + G +++
Sbjct: 139 CKTRDDEPACGRPLGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSF 198
Query: 162 ADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220
+DL DG IYF+ +S+K+ ++ L L+E G+LL+YD E +LLD L F
Sbjct: 199 LNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFP 258
Query: 221 NGVALSKDEDYLVVCE 236
NGV LS ED+++V E
Sbjct: 259 NGVQLSPAEDFVLVVE 274
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens
GN=APMAP PE=1 SV=2
Length = 416
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 41 SPISPDLLLL--PPASSASLIPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGW 98
SPI P L PP L P T ++ RL E L GPE + V++T T DG
Sbjct: 63 SPIDPQPLSFKEPPLLLGVLHPNTK-LRQAERLFENQLVGPESIA-HIGDVMFTGTADGR 120
Query: 99 IKRLHKNGTWENWKLIGGDTL------------LGITTTQENEILVCDADKGLLKVT--E 144
+ +L +NG E G LGI + V DA KGL +V +
Sbjct: 121 VVKL-ENGEIETIARFGSGPCKTRDDEPVCGRPLGIRAGPNGTLFVADAYKGLFEVNPWK 179
Query: 145 EGVTVLASH---VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKL 200
V +L S + G ++ +DL DG IYF+ +S+K+ ++ L ++E G+L
Sbjct: 180 REVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRL 239
Query: 201 LKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
L+YD E +LLD L F NGV LS ED+++V ET
Sbjct: 240 LEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAET 276
>sp|B5X3B2|APMAP_SALSA Adipocyte plasma membrane-associated protein OS=Salmo salar
GN=apmap PE=2 SV=1
Length = 416
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 28/220 (12%)
Query: 41 SPISPDLLLL--PPASSASLIPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGW 98
SPI P+LL L PP S P ++ RL E L GPE + + ++YT T DG
Sbjct: 62 SPIHPELLSLSEPPLMSGCYEPNFK-LREAQRLFEDQLVGPESIA-NFGDLIYTGTADGK 119
Query: 99 I-----------KRLHK---NGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKV-- 142
I RL K +G+ E G LGI + V DA GL KV
Sbjct: 120 IVKIEGKSITVIARLGKPPCDGSREQEPSCG--RPLGIRVGPNGTLFVADAYLGLFKVNP 177
Query: 143 -TEEGVTVLAS---HVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPH 197
T E VT L S V G R++ +DL DG +YF+ +S+++ ++ ++EA
Sbjct: 178 VTGE-VTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATAD 236
Query: 198 GKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
G++L+YD E ++L+++L FANG+ L DE+ ++V ET
Sbjct: 237 GRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAET 276
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 42 PISPDLLLL--PPASSASLIPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGWI 99
PI P + L PP + L P + +Q RL E L GPE + V+ VL+T T DG I
Sbjct: 63 PIDPQPISLKEPPLLTGVLEPN-NKLQKAERLWENQLVGPESI-VNIGDVLFTGTADGKI 120
Query: 100 KRLHKN-------------GTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKV---T 143
++ GT E+ G LGI N + V DA GL +V T
Sbjct: 121 LKIEDGEVQTVARIGHGPCGTPEDEPTCGRP--LGIRVGPNNTLFVADAYYGLYEVNPGT 178
Query: 144 EEGVTVLASH--VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKL 200
E ++++ + G +++ +DL DG IYF+ +S+K+ ++ ++E G+L
Sbjct: 179 GETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRL 238
Query: 201 LKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
L+YD E +L+ L F NGV LS ED+++V ET
Sbjct: 239 LEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLET 275
>sp|Q803F5|APMAP_DANRE Adipocyte plasma membrane-associated protein OS=Danio rerio
GN=apmap PE=2 SV=1
Length = 415
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 41 SPISPDLLLL--PPASSASLIPTTSDIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGW 98
SPI P++ L PP + P ++ RL E L GPE + + V YT T DG
Sbjct: 62 SPIQPEVFSLNEPPLMTGCYEPNLK-LRQAERLFEERLVGPESLA-NIGDVFYTGTADGK 119
Query: 99 IKRLHKN-------------GTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKV--- 142
I ++ G+ E+ G LGI + V DA GL +V
Sbjct: 120 IVKIEGRNIHVLATIGKPPCGSREHEHTCGRP--LGIRVGPNGTLFVADAYLGLFEVNPV 177
Query: 143 TEEGVTVLAS--HVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGK 199
T E +++++ + G R+ +DL DG +YF+ +S+++ ++ ++EA G+
Sbjct: 178 TGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGR 237
Query: 200 LLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
+L+YD E ++++++L F NG+ L DE+ ++V ET
Sbjct: 238 VLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAET 275
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2
Length = 329
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 75/187 (40%), Gaps = 24/187 (12%)
Query: 74 GILNGPEDVCVDRNGV-LYTATRDGWI-KRLHKNGTWENWKLIGG------DTLLGITT- 124
G GPE D G YT G I K L K G + ++ D LG T
Sbjct: 36 GNRTGPEAFAFDSTGKGFYTGVTGGKILKYLPKKGYVDFAQITNSSKSSLCDGALGTTNV 95
Query: 125 ------------TQENEILVCDADKGLLKVTEEG--VTVLASHVNGSRINLADDL-IAAT 169
T+ ++ V DA GL + G +A V G D L + T
Sbjct: 96 EKCGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPT 155
Query: 170 DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229
G +YF+ S+ FG + + GK KYDPS ++L++ L + G A+S D
Sbjct: 156 TGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDG 215
Query: 230 DYLVVCE 236
+++V +
Sbjct: 216 SFVLVGQ 222
>sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1
Length = 344
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 98 WIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLASHVN 155
W K +N T + + G T Q N++ + D L V EG T LA+ V+
Sbjct: 84 WNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVD 143
Query: 156 GSRIN-LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214
G L + G +YF+ ST + + + G+L+KYDPS ET++LL
Sbjct: 144 GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 203
Query: 215 DSLFFANGVALSKDEDYLVVCE 236
L G +S D +++V E
Sbjct: 204 KELHVPGGAEVSADSSFVLVAE 225
>sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3
SV=1
Length = 342
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 98 WIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLASHVN 155
W K +N T + + G T Q N++ + D L V EG T LA+ V+
Sbjct: 82 WNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVD 141
Query: 156 GSRIN-LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214
G L + G +YF+ ST + + + G+L+KYDPS ET++LL
Sbjct: 142 GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 201
Query: 215 DSLFFANGVALSKDEDYLVVCE 236
L G +S D +++V E
Sbjct: 202 KELHVPGGAEVSADSSFVLVAE 223
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2
Length = 335
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 126 QENEILVCDADKGLLKVTEEG--VTVLASHVNGSRINLADDL-IAATDGSIYFSVASTKF 182
+ ++ V DA GL ++ G T + V+G D L + T G +YF+ S++F
Sbjct: 107 KTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRF 166
Query: 183 GLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
+ L GKL KYDPS ++L++ L + G A+S D +++V +
Sbjct: 167 SPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQ 220
>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2
Length = 352
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 98 WIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLASHVN 155
W K +N T + + G T + +++ + D L V +EG T LA+ V
Sbjct: 88 WNKAFCENSTDPEKRPLCGRTYDISYDYKNSQMYIVDGHYHLCVVGKEGGYATQLATSVQ 147
Query: 156 GSRIN-LADDLIAATDGSIYFSVASTKFGLHNWGLDLLE-----AKPHGKLLKYDPSLNE 209
G L + G +YF+ S+ +H+ + +E + G+L+KYDPS E
Sbjct: 148 GVPFKWLYAVTVDQRTGIVYFTDVSS---IHDDSPEGVEEIMNTSDRTGRLMKYDPSTKE 204
Query: 210 TSILLDSLFFANGVALSKDEDYLVVCE 236
T++LL L G +S D ++VV E
Sbjct: 205 TTLLLKELHVPGGAEISADGSFVVVAE 231
>sp|Q01578|GNL_ZYMMO Gluconolactonase OS=Zymomonas mobilis subsp. mobilis (strain ATCC
31821 / ZM4 / CP4) GN=gnl PE=1 SV=2
Length = 356
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 121 GITTTQENEILVCDAD-KGLLKV--TEEGVTVLASHVNGSRINLADDLIAATDGSIYFSV 177
G+ + +I V D+ + ++KV +V+ + G R N +DL + G++YF+
Sbjct: 131 GMKVGPDGKIWVADSGTRAIMKVDPVTRQRSVVVDNYKGKRFNSPNDLFFSKSGAVYFT- 189
Query: 178 ASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
+GL N ++ + + + P ++ L NG+ALS DE L V +
Sbjct: 190 -DPPYGLTNLDESDIKEMNYNGVFRLSPD-GRLDLIEAGLSRPNGLALSPDETKLYVSNS 247
>sp|Q8NUH4|DRP35_STAAW Lactonase drp35 OS=Staphylococcus aureus (strain MW2) GN=drp35 PE=3
SV=1
Length = 324
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNIQDIIEDFSTTYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALSKDE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVAPDFRTVTPIIQNISVANGIALSKDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q6G5Y6|DRP35_STAAS Lactonase drp35 OS=Staphylococcus aureus (strain MSSA476) GN=drp35
PE=3 SV=1
Length = 324
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNIQDIIEDFSTTYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALSKDE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVAPDFRTVTPIIQNISVANGIALSKDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q8CQ97|DRP35_STAES Lactonase drp35 OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=drp35 PE=3 SV=1
Length = 325
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 138 GLLKVTEEGVTV--LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAK 195
G+ TE+G + + S +N DD++ + G YF T F ++ +
Sbjct: 111 GIFATTEKGEQIEEIISDLNTEY--CIDDMVFDSKGGFYF----TDFRGYS-------TQ 157
Query: 196 PHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
P G + DP + ++ ++ ANG+ALS DE L V ET
Sbjct: 158 PLGGVYYVDPDFKTVTPIIQNISVANGIALSTDEKVLWVTET 199
>sp|Q5HKM9|DRP35_STAEQ Lactonase drp35 OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=drp35 PE=3 SV=1
Length = 325
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 138 GLLKVTEEGVTV--LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAK 195
G+ TE+G + + S +N DD++ + G YF T F ++ +
Sbjct: 111 GIFATTEKGEQIEEIISDLNTEY--CIDDMVFDSKGGFYF----TDFRGYS-------TQ 157
Query: 196 PHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
P G + DP + ++ ++ ANG+ALS DE L V ET
Sbjct: 158 PLGGVYYVDPDFKTVTPIIQNISVANGIALSTDEKVLWVTET 199
>sp|B7KFG9|LPXD_CYAP7 UDP-3-O-acylglucosamine N-acyltransferase OS=Cyanothece sp. (strain
PCC 7424) GN=lpxD PE=3 SV=1
Length = 349
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 30 LLAFTLQIFF--FSP---ISPDLLLLPPASSASLIPTTSD--IQSVTRLGEGILNGPEDV 82
L A T+++F+ F P I P ++ P A + ++ IQ+ +LG +V
Sbjct: 91 LFAHTIRLFYQPFRPSPGIHPTAVIDPDAQLGENVSIGANVVIQAGVKLGN-------EV 143
Query: 83 CVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGGDTLL--GITTTQENEILVCDADKGLL 140
C+ N V+Y G LH N T +IG D ++ G E V A+ G
Sbjct: 144 CIHPNVVIYPGVTLGDRTILHGNCTIHERTVIGADCVIHSGAVIGSEGFGFVPTAE-GWF 202
Query: 141 KVTEEGVTVLASHV 154
K + G+TVL V
Sbjct: 203 KTEQSGITVLEDGV 216
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 73 EGILNGPEDVCVDRNGVLYTATRDG-WIKRLHKNGTWENWKLIGGDTLLGITTTQENEIL 131
E +L GP+ + VD+NG +Y DG I+++ +NG TLLG L
Sbjct: 1170 EALLLGPKGIAVDKNGFIYFV--DGTMIRKVDRNGIIS--------TLLGSNDLTSARPL 1219
Query: 132 VCDADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTK 181
CD + +V E T LA IN D+ I D ++ + +
Sbjct: 1220 TCDNSMHIGQVRLEWPTDLA-------INPMDNSIYVLDNNVVLQITENR 1262
>sp|Q2YZA4|DRP35_STAAB Lactonase drp35 OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=drp35 PE=3 SV=1
Length = 324
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNIQDIIEDLSTTYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVAPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 70 RLGEGILNGPEDVCVDRNGVLYTATRDG-WIKRLHKNGTWENWKLIGGDTLLGITTTQEN 128
R E LN P + VDR+G +Y DG I+++ +N +IG + G+T+TQ
Sbjct: 1299 RASEASLNSPRGITVDRHGFIYFV--DGTMIRKIDENAVITT--VIGSN---GLTSTQP- 1350
Query: 129 EILVCDADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTK 181
L CD+ + +V E T LA +N D+ + D +I ++ +
Sbjct: 1351 --LSCDSGMDITQVRLEWPTDLA-------VNPMDNSLYVLDNNIVLQISENR 1394
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 70 RLGEGILNGPEDVCVDRNGVLYTATRDG-WIKRLHKNGTWENWKLIGGDTLLGITTTQEN 128
+ E LN P + VDR+G +Y DG I+R+ +N +IG + G+T+TQ
Sbjct: 1305 KASEASLNSPRGITVDRHGFIYFV--DGTMIRRIDENAVITT--VIGSN---GLTSTQP- 1356
Query: 129 EILVCDADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTK 181
L CD+ + +V E T LA +N D+ + D +I ++ +
Sbjct: 1357 --LSCDSGMDITQVRLEWPTDLA-------VNPMDNSLYVLDNNIVLQISENR 1400
>sp|Q7A338|DRP35_STAAN Lactonase drp35 OS=Staphylococcus aureus (strain N315) GN=drp35
PE=1 SV=1
Length = 324
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q99QV3|DRP35_STAAM Lactonase drp35 OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=drp35 PE=1 SV=1
Length = 324
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q5HCK9|DRP35_STAAC Lactonase drp35 OS=Staphylococcus aureus (strain COL) GN=drp35 PE=3
SV=2
Length = 324
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q2FUS8|DRP35_STAA8 Lactonase drp35 OS=Staphylococcus aureus (strain NCTC 8325)
GN=drp35 PE=3 SV=2
Length = 324
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|Q2FDH3|DRP35_STAA3 Lactonase drp35 OS=Staphylococcus aureus (strain USA300) GN=drp35
PE=3 SV=2
Length = 324
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|A4IF63|TRIM2_BOVIN Tripartite motif-containing protein 2 OS=Bos taurus GN=TRIM2 PE=2
SV=1
Length = 744
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
+SD + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + + NEI+V D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSN--NEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|Q9S0S3|DRP35_STAAU Lactonase drp35 OS=Staphylococcus aureus GN=drp35 PE=2 SV=2
Length = 324
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 122 ITTTQENEILVC-----DADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFS 176
I ++ + VC + G+ TE G + + S DD++ + G YF
Sbjct: 91 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF- 149
Query: 177 VASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236
T F ++ P G + P + ++ ++ ANG+ALS DE L V E
Sbjct: 150 ---TDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 199
Query: 237 T 237
T
Sbjct: 200 T 200
>sp|D2GXS7|TRIM2_AILME Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
+SD + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + + NEI+V D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSN--NEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|Q4L9R6|DRP35_STAHJ Lactonase drp35 OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=drp35 PE=3 SV=1
Length = 325
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 163 DDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG 222
DD++ + G YF T F ++ P G + P + ++ ++ ANG
Sbjct: 136 DDMVFDSKGGFYF----TDFRGYS-------TNPKGGVYYVSPDFKTVTPVIQNISVANG 184
Query: 223 VALSKDEDYLVVCET 237
VALS DE L V ET
Sbjct: 185 VALSTDEKILWVTET 199
>sp|Q9C040|TRIM2_HUMAN Tripartite motif-containing protein 2 OS=Homo sapiens GN=TRIM2 PE=1
SV=1
Length = 744
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
+SD + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + + NEI++ D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSN--NEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|F7H9X2|TRIM2_CALJA Tripartite motif-containing protein 2 OS=Callithrix jacchus
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
+SD + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + + NEI++ D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSN--NEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|Q6GDB6|DRP35_STAAR Lactonase drp35 OS=Staphylococcus aureus (strain MRSA252) GN=drp35
PE=3 SV=1
Length = 324
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 138 GLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPH 197
G+ TE G + + S DD++ + G YF T F ++ P
Sbjct: 112 GIFAATENGDNIQDIIEDLSTEYCIDDMVFDSKGGFYF----TDFRGYS-------TNPL 160
Query: 198 GKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237
G + P + ++ ++ ANG+ALS DE L V ET
Sbjct: 161 GGVYYVTPDFKTVTPIIQNISVANGIALSTDEKVLWVTET 200
>sp|C5C233|Y3416_BEUC1 UPF0678 fatty acid-binding protein-like protein Bcav_3416
OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333
/ NBRC 16432) GN=Bcav_3416 PE=3 SV=1
Length = 211
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHN----WGLDL 191
V+V V G RI+LA DL+A T + + A+ +GL W DL
Sbjct: 144 VSVFVGSVRGPRIDLATDLVARTSTAAEVTAATRMYGLVQGDLMWATDL 192
>sp|D3ZQG6|TRIM2_RAT Tripartite motif-containing protein 2 OS=Rattus norvegicus GN=Trim2
PE=1 SV=2
Length = 744
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
++D + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SNDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + ++ NEI++ D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSS--NEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|O70277|TRIM3_RAT Tripartite motif-containing protein 3 OS=Rattus norvegicus GN=Trim3
PE=1 SV=1
Length = 744
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
Query: 69 TRLGEGILNGPEDVCVDRNG-VLYTATRDGWIKRLHKNGTWENWKLIGGDTLLGIT---- 123
T++G G L GP+ V VDRNG ++ + + NG KL+G G T
Sbjct: 568 TKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNG-----KLVGRFGGRGATDRHF 622
Query: 124 -------TTQENEILVCDADKGLLKVTE---EGVTVLASHVNGS-RINLADDLIAATDGS 172
+NEI+V D +KV E + SH G+ + N + ++G+
Sbjct: 623 AGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGN 682
Query: 173 IYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231
I + +WG ++ G L Y +N ++ + L+ G+AL+ D
Sbjct: 683 IIVA---------DWGNSRIQVFDSSGSFLSY---INTSA---EPLYGPQGLALTSDGHV 727
Query: 232 LV 233
+V
Sbjct: 728 VV 729
>sp|Q9R1R2|TRIM3_MOUSE Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3 PE=1
SV=1
Length = 744
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
Query: 69 TRLGEGILNGPEDVCVDRNG-VLYTATRDGWIKRLHKNGTWENWKLIGGDTLLGIT---- 123
T++G G L GP+ V VDRNG ++ + + NG KL+G G T
Sbjct: 568 TKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNG-----KLVGRFGGRGATDRHF 622
Query: 124 -------TTQENEILVCDADKGLLKVTE---EGVTVLASHVNGS-RINLADDLIAATDGS 172
+NEI+V D +KV E + SH G+ + N + ++G+
Sbjct: 623 AGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGN 682
Query: 173 IYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231
I + +WG ++ G L Y +N ++ + L+ G+AL+ D
Sbjct: 683 IIVA---------DWGNSRIQVFDSSGSFLSY---INTSA---EPLYGPQGLALTSDGHV 727
Query: 232 LV 233
+V
Sbjct: 728 VV 729
>sp|O75382|TRIM3_HUMAN Tripartite motif-containing protein 3 OS=Homo sapiens GN=TRIM3 PE=1
SV=2
Length = 744
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
Query: 69 TRLGEGILNGPEDVCVDRNG-VLYTATRDGWIKRLHKNGTWENWKLIGGDTLLGIT---- 123
T++G G L GP+ V VDRNG ++ + + NG KL+G G T
Sbjct: 568 TKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNG-----KLVGRFGGRGATDRHF 622
Query: 124 -------TTQENEILVCDADKGLLKVTE---EGVTVLASHVNGS-RINLADDLIAATDGS 172
+NEI+V D +KV E + SH G+ + N + ++G+
Sbjct: 623 AGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGN 682
Query: 173 IYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231
I + +WG ++ G L Y +N ++ + L+ G+AL+ D
Sbjct: 683 IIVA---------DWGNSRIQVFDSSGSFLSY---INTSA---EPLYGPQGLALTSDGHV 727
Query: 232 LV 233
+V
Sbjct: 728 VV 729
>sp|Q61851|FGFR3_MOUSE Fibroblast growth factor receptor 3 OS=Mus musculus GN=Fgfr3 PE=1
SV=1
Length = 801
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 160 NLADDLIAATDGSIYFSVASTKFG--LHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL 217
+L + + +D Y V KFG + LD+LE PH +L+ N+T+IL +
Sbjct: 206 SLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAILGSDV 265
Query: 218 FF 219
F
Sbjct: 266 EF 267
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif-containing protein 2 OS=Mus musculus GN=Trim2 PE=1
SV=1
Length = 744
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 62 TSDIQSVTRLGEGILNGPEDVCVDRNG-----------VLYTATRDGWIKRLHKNGTWEN 110
++D + T++G G L GP+ V VDRNG V + R G +
Sbjct: 561 SNDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD- 619
Query: 111 WKLIGGDTLLGITTTQENEILVCDADKGLLKV-TEEGVTVLASHVNGS---RINLADDLI 166
+ G + + NEI++ D +KV +EG +L NG + N +
Sbjct: 620 -RQFAGPHFAAVNSN--NEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVA 676
Query: 167 AATDGSIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVAL 225
++G+I + +WG ++ G L Y +N ++ D L+ G+AL
Sbjct: 677 VDSNGNIIVA---------DWGNSRIQVFDGSGSFLSY---INTSA---DPLYGPQGLAL 721
Query: 226 SKDEDYLVV 234
+ D +V
Sbjct: 722 TSDGHVVVA 730
>sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans GN=lin-41 PE=2 SV=1
Length = 1147
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 72 GEGILNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKLIGG------DTLLGITT 124
G+G L P +CVD+ G + A R + ++ K+G + + G D GITT
Sbjct: 841 GDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITT 900
Query: 125 TQENEILVCDADKGLLKVTEE 145
N I+V D D ++V +E
Sbjct: 901 NSLNNIVVADKDNHRVQVFDE 921
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 18/110 (16%)
Query: 73 EGILNGPEDVCVDRNGVLYTATRDG-WIKRLHKNGTWENWKLIGGDTLLGITTTQENEIL 131
E L P+ + VD+NG++Y DG I+++ +NG TLLG L
Sbjct: 1280 EATLMSPKGMAVDKNGLIYFV--DGTMIRKVDQNGIIS--------TLLGSNDLTSARPL 1329
Query: 132 VCDADKGLLKVTEEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTK 181
CD + +V E T LA IN D+ I D ++ + +
Sbjct: 1330 TCDTSMHISQVRLEWPTDLA-------INPMDNSIYVLDNNVVLQITENR 1372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,652,412
Number of Sequences: 539616
Number of extensions: 4049848
Number of successful extensions: 9889
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 9838
Number of HSP's gapped (non-prelim): 63
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)