BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026390
(239 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/239 (76%), Positives = 200/239 (83%), Gaps = 8/239 (3%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGH---GFGESSALRDG 57
MDPPLVNESSFSAANPSSYSLA IWPF + GG+ GLRM N+ GF E S RDG
Sbjct: 1 MDPPLVNESSFSAANPSSYSLASIWPFGGDQGGS-VLGLRMANLAQNLGGFRECSTNRDG 59
Query: 58 SMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGS 117
SMEESTVTEQSGGG RKR+D+SSEDESS++VST SSAN L++SN K MK S++ENG
Sbjct: 60 SMEESTVTEQSGGG--RKRKDVSSEDESSRMVST-SSANQLSNSNDKRMKVVESRDENGG 116
Query: 118 -KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
KAEV+ +S+ G K AE S EPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL
Sbjct: 117 IKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN+TP IEGF K++
Sbjct: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNI 235
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/238 (79%), Positives = 204/238 (85%), Gaps = 9/238 (3%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGA-GDAGLRMGNMGHGFGESSALRDGSM 59
MDPPL++E+SFSAANPSSY+L EIWPF NG A GLR+GN+ GFGE RDGS+
Sbjct: 1 MDPPLISETSFSAANPSSYTLTEIWPFSALNGDASAGLGLRVGNLSAGFGE----RDGSV 56
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG-SK 118
EESTVTEQS GG GRKRRD SSEDESSK+VST+SS N+L DSN K MK SGS+NENG SK
Sbjct: 57 EESTVTEQSVGG-GRKRRDFSSEDESSKMVSTSSSGNELQDSNVKRMKISGSQNENGKSK 115
Query: 119 AEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKIL 176
AEVEASSA AE +SK SEPPK DYIHVRARRGQATDSHSLAERARREKISERMKIL
Sbjct: 116 AEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKIL 175
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM + PT+EGFHPKD
Sbjct: 176 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMGMNPTVEGFHPKD 233
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/241 (74%), Positives = 198/241 (82%), Gaps = 16/241 (6%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+NE SFSAANPSSYSL EIWPFP + A GLRM N+ A RDGS++
Sbjct: 1 MDPPLINEKSFSAANPSSYSLTEIWPFPPPSSTA--LGLRMANL--------ADRDGSVD 50
Query: 61 ESTVTEQSGGG--CGRKRRDLSSE-DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG- 116
ESTVTEQ GG RK RDLSSE D+SS +VSTT+SA+DLND NGK K SGS+NEN
Sbjct: 51 ESTVTEQRGGNRNGNRKARDLSSEEDDSSIMVSTTTSAHDLNDLNGKRRKISGSRNENND 110
Query: 117 SKAEVEASSAAGNKPAE-SSKPSEPP-KDYIHVRARRGQATDSHSLAERARREKISERMK 174
S+AE+EASSAA NKPAE SSKPSEPP +DYIHVR+RRGQATDSHSLAERARRE+I ERMK
Sbjct: 111 SRAEIEASSAANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMK 170
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
ILQDLVPGCNKVIGKAL LDEIINYIQSLQ QVEFLSMKLEAVNSRM+ +P IEG HPKD
Sbjct: 171 ILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPAIEGLHPKD 230
Query: 235 V 235
+
Sbjct: 231 L 231
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 202/248 (81%), Gaps = 14/248 (5%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGA-----GDAGLRMGNMGH---GFGESS 52
MDPPL+NESSFSAANPS+YSLAEIWPFP+N+ A GLR+ N G F +SS
Sbjct: 1 MDPPLINESSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSS 60
Query: 53 ALRDGSMEESTVTEQSGGGCGRKRR-DLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGS 111
A RD S++ESTVTEQSG G ++R D+SSEDESSKIVST SS + +N SNGK MK S +
Sbjct: 61 ANRDVSVDESTVTEQSGSRGGGRKRRDVSSEDESSKIVST-SSGSGMNASNGKRMKISRT 119
Query: 112 KNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKI 169
+ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAERARREKI
Sbjct: 120 PDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKI 179
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN T+EG
Sbjct: 180 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--HTVEG 237
Query: 230 FHPKDVSL 237
F KD+ +
Sbjct: 238 FPLKDLGV 245
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/240 (74%), Positives = 198/240 (82%), Gaps = 13/240 (5%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+NESSFSAANPS+YSLAEIWPFP+N+ A +G G +SSA RD S++
Sbjct: 1 MDPPLINESSFSAANPSAYSLAEIWPFPVNSASA------IGEPTAGL-DSSANRDVSVD 53
Query: 61 ESTVTEQSGGGCGRKRR-DLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG-SK 118
ESTVTEQSG G ++R D+SSEDESSKIVST SS + +N SNGK MK S + +ENG SK
Sbjct: 54 ESTVTEQSGSRGGGRKRRDVSSEDESSKIVST-SSGSGMNASNGKRMKISRTPDENGGSK 112
Query: 119 AEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
AE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 113 AELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN T+EGF KD+ +
Sbjct: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--HTVEGFPLKDLGV 230
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/292 (63%), Positives = 202/292 (69%), Gaps = 58/292 (19%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGA-----GDAGLRMGNMGH---GFGESS 52
MDPPL+NESSFSAANPS+YSLAEIWPFP+N+ A GLR+ N G F +SS
Sbjct: 1 MDPPLINESSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSS 60
Query: 53 ALRDGSMEESTVTEQ-SGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGS 111
A RD S++ESTVTEQ G GRKRRD+SSEDESSKIVS TSS + +N SNGK MK S +
Sbjct: 61 ANRDVSVDESTVTEQSGSRGGGRKRRDVSSEDESSKIVS-TSSGSGMNASNGKRMKISRT 119
Query: 112 KNEN-GSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER------ 163
+EN GSKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 120 PDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERVMQFYT 179
Query: 164 --------------------------------------ARREKISERMKILQDLVPGCNK 185
ARREKISERMKILQDLVPGCNK
Sbjct: 180 LLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMKILQDLVPGCNK 239
Query: 186 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN T+EGF KD+ +
Sbjct: 240 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--HTVEGFPLKDLGV 289
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 197/265 (74%), Gaps = 40/265 (15%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGG--AGDAGLRMGN----MGHGF------ 48
MDPPL++ESSFSAANPS LAEIWPF +GG +G LRMG+ +G F
Sbjct: 1 MDPPLISESSFSAANPS---LAEIWPF---SGGDVSGVLDLRMGSGVVAIGGIFGHGGSV 54
Query: 49 ------------GESSALRDGSMEESTVTEQSG----GGCGRKRRDLSSEDESSKIVSTT 92
G + RDGS+EESTVTEQSG GGC RKR+D+ SEDESSK+VS T
Sbjct: 55 GGGGFHDGGCSGGVGTINRDGSIEESTVTEQSGSHGGGGC-RKRKDVISEDESSKLVSAT 113
Query: 93 SSANDLNDSNGKWMKTSGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPKDYIHVRAR 150
+SAN+L + NGK MK SGS+ EN GSK +EASS+ G K AE SS+P EPPKDYIHVRAR
Sbjct: 114 TSANELTE-NGKRMKISGSRYENNGSKTGIEASSSGGGKSAEKSSQPPEPPKDYIHVRAR 172
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL
Sbjct: 173 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 232
Query: 211 SMKLEAVNSRMNLTPTIEGFHPKDV 235
SMKLE VNS +N P I F KDV
Sbjct: 233 SMKLEVVNSGVN--PAINCFPSKDV 255
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/183 (83%), Positives = 167/183 (91%), Gaps = 4/183 (2%)
Query: 59 MEESTVTEQS-GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNEN-G 116
MEESTVTEQS G G GRKR++LSSEDESSKIVSTT+SAN+LNDSNGK MKT SKN N G
Sbjct: 1 MEESTVTEQSVGCGGGRKRKELSSEDESSKIVSTTTSANELNDSNGKRMKTPVSKNGNTG 60
Query: 117 SK-AEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMK 174
SK AEVEASSA G+KP ++SKP+EPPK DYIHVRARRGQATDSHSLAERARRE+ISERMK
Sbjct: 61 SKEAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMK 120
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
ILQDLVPGCNKVIGKALVLDEIINYIQSLQ+QVEFLSMKLEAVNSR+N+ P+ EGFH KD
Sbjct: 121 ILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGFHSKD 180
Query: 235 VSL 237
+ L
Sbjct: 181 LGL 183
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 147/166 (88%), Gaps = 4/166 (2%)
Query: 74 RKRRDLSSE-DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG-SKAEVEASSAAGNKP 131
RK RD SSE D+SSK+VSTT+SANDLNDSNGK K SGS++EN S+AE EASSAA NK
Sbjct: 7 RKTRDFSSEKDDSSKMVSTTTSANDLNDSNGKRRKISGSRSENNDSRAETEASSAANNKT 66
Query: 132 AE-SSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
AE SSKPSEPPK DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCNKVIGK
Sbjct: 67 AEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGK 126
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
ALVLDEIINYIQSLQ QVEFLSMKLEAVNSRMN +PT E HPKD+
Sbjct: 127 ALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNTSPTTEHLHPKDL 172
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/248 (64%), Positives = 180/248 (72%), Gaps = 36/248 (14%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGA-----GDAGLRMGNMGH---GFGESS 52
MDPPL+NESSFSAANPS+YSLAEIWPFP+N+ A GLR+ N G F +SS
Sbjct: 1 MDPPLINESSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSS 60
Query: 53 ALRDGSMEESTVTEQSGGGCGRKRR-DLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGS 111
A RD S++ESTVTEQSG G ++R D+SSEDESSKIVST SS + +N SNGK MK S +
Sbjct: 61 ANRDVSVDESTVTEQSGSRGGGRKRRDVSSEDESSKIVST-SSGSGMNASNGKRMKISRT 119
Query: 112 KNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKI 169
+ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 120 PDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAER------ 173
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN T+EG
Sbjct: 174 ----------------VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--HTVEG 215
Query: 230 FHPKDVSL 237
F KD+ +
Sbjct: 216 FPLKDLGV 223
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/244 (61%), Positives = 179/244 (73%), Gaps = 11/244 (4%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMG-NMGHGF--GESSALRDG 57
MDPPLVN+SSFSAANPSSY+L+EIWPFP+N+ A +GLR+ N G F E S +D
Sbjct: 1 MDPPLVNDSSFSAANPSSYTLSEIWPFPVND--AVRSGLRLAVNSGRVFTRSEHSGNKDV 58
Query: 58 SM-EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
S EESTVT+ + G GRK RDL+SED+SSK+VS++SS N+L +S K K GS++ NG
Sbjct: 59 SAAEESTVTDLTAGWGGRKTRDLNSEDDSSKMVSSSSSGNELKESGDKKRKLCGSESGNG 118
Query: 117 S-----KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 171
+ E + G+K E EPPKDYIHVRARRGQATD HSLAERARREKISE
Sbjct: 119 DGSMRPEGETSSGGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISE 178
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
+M LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS + PTI F
Sbjct: 179 KMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFP 238
Query: 232 PKDV 235
D+
Sbjct: 239 SGDL 242
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 178/244 (72%), Gaps = 12/244 (4%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMG-NMGHGF--GESSALRDG 57
MDPPLVN+SSFSAANPSSY+L+EIWPFP+N+ A +GLR+ N G F E S +D
Sbjct: 1 MDPPLVNDSSFSAANPSSYTLSEIWPFPVND--AVRSGLRLAVNSGRVFTRSEHSGNKDV 58
Query: 58 SM-EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
S EESTVT+ + G RK RDL+SED+SSK+VS++SS N+L +S K K GS++ NG
Sbjct: 59 SAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKESGDKKRKLCGSESGNG 118
Query: 117 S-----KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 171
+ E + + +KP EPPKDYIHVRARRGQATD HSLAERARREKISE
Sbjct: 119 DGSMRPEGETSSGGGGSKATEQKNKP-EPPKDYIHVRARRGQATDRHSLAERARREKISE 177
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
+M LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS + PTI F
Sbjct: 178 KMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFP 237
Query: 232 PKDV 235
D+
Sbjct: 238 SGDL 241
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 175/252 (69%), Gaps = 32/252 (12%)
Query: 1 MDPP-LVNESSFSAANPSSYSLAEIWPFPINNGG-----------AGDAGLRMGNMGHGF 48
MDPP L+N+ + SY LAEIW +PI+ GG G G +G+ G
Sbjct: 1 MDPPTLINQGA-------SYHLAEIWNYPISGGGAGEAGGGLELRGGHLGQNLGHFGDNA 53
Query: 49 GESSALRD--GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWM 106
G A R+ G ++ V E+SGG RKRRD ++EDE K VST+ N ND +GK +
Sbjct: 54 GVGGANREASGGGDDPMVLERSGG---RKRRDAATEDEGGKAVSTSGGGNVANDCDGKRL 110
Query: 107 KTSGSKNEN-GSKAEVEASSAAGNKPAESS-KPSEPPK-DYIHVRARRGQATDSHSLAER 163
KTSGS++EN SK EVE SS KP E + + ++PPK D+IHVRARRGQATDSHSLAER
Sbjct: 111 KTSGSRDENRDSKTEVETSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAER 167
Query: 164 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 168 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN- 226
Query: 224 TPTIEGFHPKDV 235
IEGF KD
Sbjct: 227 -SGIEGFPSKDF 237
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/251 (60%), Positives = 172/251 (68%), Gaps = 40/251 (15%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+ +S+FS A YSLAEIWP G S +
Sbjct: 1 MDPPLITDSTFSPA----YSLAEIWP------------------GMPHFPPPFPHPSSAD 38
Query: 61 ESTVTEQSGGGCGRKRRDLSS---------EDESSKIVS--TTSSANDLNDSNG--KWMK 107
ST+T+ + RKR+D SS ED+ SK++S TT++AN N+ +G K MK
Sbjct: 39 HSTLTDLTA--TPRKRKDCSSSSSSASAADEDDCSKVLSSTTTATANLSNNDSGSNKQMK 96
Query: 108 TSGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAERA 164
GS EN G KAE EASSA GNK +E S+KP E PK DYIHVRARRGQATDSHSLAERA
Sbjct: 97 LGGSSVENDGFKAEAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERA 156
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN+
Sbjct: 157 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMN 216
Query: 225 PTIEGFHPKDV 235
PTI+GF KDV
Sbjct: 217 PTIDGFPSKDV 227
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 175/252 (69%), Gaps = 32/252 (12%)
Query: 1 MDPP-LVNESSFSAANPSSYSLAEIWPFPINNGG-----------AGDAGLRMGNMGHGF 48
MDPP L+N+ + SY LAEIW +PI+ GG G G +G+ G
Sbjct: 1 MDPPTLINQGA-------SYHLAEIWNYPISGGGAGEAGGGLELRGGHLGQNLGHFGDNA 53
Query: 49 GESSALRD--GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWM 106
G A R+ G ++ V E+SGG RKRRD ++EDE K VST+ N ND +GK +
Sbjct: 54 GVGGANREASGGGDDPMVLERSGG---RKRRDAATEDEGGKAVSTSGGGNVANDCDGKRL 110
Query: 107 KTSGSKNEN-GSKAEVEASSAAGNKPAESS-KPSEPPK-DYIHVRARRGQATDSHSLAER 163
KTSGS++EN SK EVE SS KP E + + ++PPK D+IHVRARRGQATDSHSLAER
Sbjct: 111 KTSGSRDENRDSKTEVETSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAER 167
Query: 164 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 168 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN- 226
Query: 224 TPTIEGFHPKDV 235
IEGF KD
Sbjct: 227 -SGIEGFPSKDF 237
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 165/240 (68%), Gaps = 43/240 (17%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+++S+FS A YSLAEIWP M H F + S L
Sbjct: 1 MDPPLISDSTFSPA----YSLAEIWP----------------GMPH-FPDHSHL------ 33
Query: 61 ESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNG--KWMKTSGSKNEN-GS 117
T T + G +D ++ DE ++S+T++AN N+ +G K MK GS EN G
Sbjct: 34 --TATAPTKG------KDSTAADE---VLSSTTTANLSNNDSGSNKRMKVGGSSFENDGF 82
Query: 118 KAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKI 175
KAE EASS GNK +E S+KP E PK DYIHVRARRGQATDSHSLAERARREKISERMKI
Sbjct: 83 KAEAEASSVGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKI 142
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQDL PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN PTI+GF KDV
Sbjct: 143 LQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDV 202
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/247 (62%), Positives = 172/247 (69%), Gaps = 18/247 (7%)
Query: 1 MDP-PLVNESSF--SAANPSSYSLAEIWPFPIN-NGGAGDAGLRMGNMGHGFGESSALRD 56
MDP ++NE SF N + +SLAEIW FP NGG G GLR G+G G+
Sbjct: 1 MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQYGEFGP 60
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSS-ANDLNDSNGKWMKTSGSKNEN 115
G + +GGG G+KRRD SED+S+K VST++ AN +NDS+GK K SG+KNE
Sbjct: 61 GLNRDGNGLNHAGGG-GKKRRD--SEDDSAKCVSTSNGGANAVNDSDGKRTKASGNKNEG 117
Query: 116 G-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLAERARREKIS 170
G K E EASS K AE S P YIHVRARRGQATDSHSLAERARREKIS
Sbjct: 118 GDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKIS 174
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE F
Sbjct: 175 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNT--GIEAF 232
Query: 231 HPKDVSL 237
PKDVS+
Sbjct: 233 PPKDVSV 239
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/240 (58%), Positives = 171/240 (71%), Gaps = 21/240 (8%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPP++ N SY+LAEIWPFP+N G G G N+G F +S+ RD S
Sbjct: 1 MDPPVL-------MNDGSYNLAEIWPFPVNGNGRGQFGQ---NLGAQFLDSN--RDVSGN 48
Query: 61 ESTVTEQSGGGCGRKRRDLSS--EDESSKIVSTTS-SANDLNDSNGKWMKTSGSKNEN-G 116
+ + ++ G G + ED+S+K+VS+++ + N +NDS+ K +KTSG+ +EN
Sbjct: 49 DLMILDRRGARGGGGAKRRHDVVEDDSTKVVSSSNGNGNAVNDSDAKRLKTSGNLDENHD 108
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKI 175
SK+E E SS G ++++P E PK DYIHVRARRGQATDSHSLAERARREKISERMKI
Sbjct: 109 SKSEAEPSS--GKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 166
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RM TP IE F KD
Sbjct: 167 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRM--TPGIEAFPSKDF 224
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/245 (62%), Positives = 169/245 (68%), Gaps = 18/245 (7%)
Query: 1 MDP-PLVNESSF--SAANPSSYSLAEIWPFPIN-NGGAGDAGLRMGNMGHGFGESSALRD 56
MDP ++NE SF N + +SLAEIW FP NGG G GLR G+G G+
Sbjct: 1 MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQYGEFGP 60
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSS-ANDLNDSNGKWMKTSGSKNEN 115
G + +GGG G+KRRD SED+S+K VST++ AN +NDS+GK K SG+KNE
Sbjct: 61 GLNRDGNGLNHAGGG-GKKRRD--SEDDSAKCVSTSNGGANAVNDSDGKRTKASGNKNEG 117
Query: 116 G-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLAERARREKIS 170
G K E EASS K AE S P YIHVRARRGQATDSHSLAERARREKIS
Sbjct: 118 GDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKIS 174
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE F
Sbjct: 175 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNT--GIEAF 232
Query: 231 HPKDV 235
PKD
Sbjct: 233 PPKDY 237
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 168/245 (68%), Gaps = 18/245 (7%)
Query: 1 MDP-PLVNESSF--SAANPSSYSLAEIWPFPIN-NGGAGDAGLRMGNMGHGFGESSALRD 56
MDP ++NE SF N + +SLAEIW FP NGG G GLR G+G G+
Sbjct: 1 MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQYGEFGP 60
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSS-ANDLNDSNGKWMKTSGSKNEN 115
G + +GGG G+KRRD SED+S+K VST++ AN +NDS+GK K SG+KNE
Sbjct: 61 GLNRDGNGLNHAGGG-GKKRRD--SEDDSAKCVSTSNGGANAVNDSDGKRTKASGNKNEG 117
Query: 116 G-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLAERARREKIS 170
G K E EASS K AE S P YIHVRARRGQATDSH LAERARREKIS
Sbjct: 118 GDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHGLAERARREKIS 174
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE F
Sbjct: 175 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNT--GIEAF 232
Query: 231 HPKDV 235
PKD
Sbjct: 233 PPKDY 237
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/238 (57%), Positives = 160/238 (67%), Gaps = 23/238 (9%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
M PP+VNES+F+ E WPF +N D L + N G F S E
Sbjct: 11 MVPPVVNESTFT----------EFWPFSVNY----DVRLPL-NSGQDFRYSGNSYISGAE 55
Query: 61 ESTVTEQSGGGCGRKRRDLSSEDESSKIV-STTSSANDLNDSNGKWMKT--SGSKNENGS 117
ESTVTEQ+GGG RKRR L+S+DESSK++ S+ +S N L +S+ K MK S + E+G
Sbjct: 56 ESTVTEQTGGG--RKRRALTSQDESSKMMFSSCTSVNRLKESSKKKMKVCLSEGETEDGL 113
Query: 118 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
+ E E SS G+K E P KDYIHVRARRGQATD HSLAERARREKISERMK LQ
Sbjct: 114 RREGETSSGGGSKETEEKSPL---KDYIHVRARRGQATDRHSLAERARREKISERMKFLQ 170
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DL+PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS ++ P + F D+
Sbjct: 171 DLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNSDVSNGPKVGMFPSGDL 228
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 140/175 (80%), Gaps = 11/175 (6%)
Query: 64 VTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNEN-GSKAEVE 122
V E+SGG RKRRD ++EDE K VST+ N ND +GK +KTSGS++EN SK EVE
Sbjct: 2 VLERSGG---RKRRDAATEDEGGKAVSTSGGGNVANDCDGKRLKTSGSRDENRDSKTEVE 58
Query: 123 ASSAAGNKPAESS-KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
SS KP E + + ++PPK D+IHVRARRGQATDSHSLAERARREKISERMKILQDLV
Sbjct: 59 TSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLV 115
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN IEGF KD
Sbjct: 116 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--SGIEGFPSKDF 168
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 161/244 (65%), Gaps = 44/244 (18%)
Query: 13 AANPSSYSLAEIWPFPINNGGAGDA-----------------GLRMGNMGHGFGESSALR 55
A + Y+LAEIWPFP+N+ A + G+ M NM S R
Sbjct: 10 AGDTVPYNLAEIWPFPMNSATAATSFHNNNNAANSLAAAAAAGISM-NMNVNL---SVNR 65
Query: 56 DGSMEESTVTEQS---GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSK 112
D + V +Q+ GG R+R D D+S+K VST++ AN +N+ + K +KT GS
Sbjct: 66 D---HDPMVMDQAPNLNGGVRRRRED----DDSAKGVSTSNDANAMNEGDNKRLKTGGSN 118
Query: 113 NENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISE 171
+ SKAE E E++KP+EPPK DYIHVRARRGQATDSHSLAERARREKISE
Sbjct: 119 ENHESKAEGE----------ETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISE 168
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR L+P IEGF
Sbjct: 169 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR--LSPGIEGFP 226
Query: 232 PKDV 235
K+
Sbjct: 227 SKEF 230
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 169/261 (64%), Gaps = 32/261 (12%)
Query: 1 MDPP-LVNESSFSA---ANP--SSYSLAEIWPFPINNG-GAGDAG----LRMGNMGHGFG 49
MDPP L+N+ SF ANP + ++L+EIW FPI+ G D+G LRM ++ H
Sbjct: 1 MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
Query: 50 ESSALRDGSMEESTVTE---------QSGGGCGRKRRDLSSEDESSKIVSTTSSANDLN- 99
+ G+ E S G G +KRRD S+ +S K+ ST++ N
Sbjct: 61 HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRD--SDQDSPKVSSTSNGNNANAN 118
Query: 100 -----DSNGKWMKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQ 153
DS GK +KT+ +++N SK E E S + ++ + P +P +DYIHVRARRGQ
Sbjct: 119 SSAGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPT-PEQPKQDYIHVRARRGQ 177
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK
Sbjct: 178 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 237
Query: 214 LEAVNSRMNLTPTIEGFHPKD 234
LEAVNSR+ P IE F PKD
Sbjct: 238 LEAVNSRIG--PGIEVFPPKD 256
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 161/227 (70%), Gaps = 25/227 (11%)
Query: 17 SSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKR 76
S + EIW FP+ G+ + +G RD S+ ESTVT+ SG GR+R
Sbjct: 8 SQTPIPEIWQFPL-------VGVPLSLKING-------RDSSVAESTVTDHSGSSRGRRR 53
Query: 77 RDLS---SEDESSKIVSTTSSANDLNDSNGKWMK--TSGSKNEN-GSKAEVEASSAAGNK 130
R S SEDESSKI+ST SS ND DS K +K SG NEN SK E EASS NK
Sbjct: 54 RRDSAPPSEDESSKIMST-SSGNDATDSEAKRLKGMKSGDGNENSNSKTEAEASSGLCNK 112
Query: 131 PA-ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
A +S++PSE PK DYIHVRARRGQATDSHSLAERARREKISERM ILQDLVPGCNKVIG
Sbjct: 113 LADQSNQPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIG 172
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
KA VLDEIINYIQ+LQRQVEFLSMKLEAVNS+MN P IEGF PKD
Sbjct: 173 KASVLDEIINYIQALQRQVEFLSMKLEAVNSQMN--PGIEGFPPKDF 217
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 154/227 (67%), Gaps = 19/227 (8%)
Query: 14 ANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCG 73
ANP+SY L+EIW FP N + GLR + HGF + ++
Sbjct: 11 ANPTSYHLSEIWQFPPPNA-PDELGLRRPHFTHGFAD---FAPDPTRDAVPGRDPASIAQ 66
Query: 74 RKRRDLSSEDE-SSKIVSTTSSANDLND-SNGKWMKTSGSKNENGSKAEVEASSAAGNKP 131
+KRRD S+E+E S+K STT++ N+ +GK +KTS S K E E SS K
Sbjct: 67 KKRRDASAEEEESAKGASTTNAVNEGGGVGDGKRVKTSES-----GKGEGETSSG---KL 118
Query: 132 AESS--KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
AE S PSEPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQD+VPGCNKVIG
Sbjct: 119 AEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIG 178
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSR L P IE F PKD
Sbjct: 179 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSR--LAPRIEVFPPKDF 223
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/244 (56%), Positives = 160/244 (65%), Gaps = 46/244 (18%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+N+S+FS+A ++LAEIWP P G GD E
Sbjct: 1 MDPPLINDSTFSSA----FALAEIWPRP----GGGD-----------------------E 29
Query: 61 ESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAN-DLNDSNGKWMKTSG--SKNENGS 117
STVT+ + R+ + +++ STTS + NDS K ++ G S ENG
Sbjct: 30 NSTVTQLTAA------RNHGNGKKNNNNHSTTSEDDCSKNDSGNKRIRLGGGGSTVENGG 83
Query: 118 KAEV-EASSAAG--NKPAESSKPSE--PPK-DYIHVRARRGQATDSHSLAERARREKISE 171
+ EASS AG N +S+KPSE PPK DYIHVRARRGQATDSHS+AERARREKISE
Sbjct: 84 GLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISE 143
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
RMKILQDLVPGCNK+IGKALVLDEIINYIQSLQ QVEFLSMKLEAVNSR N+ PT EGF
Sbjct: 144 RMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFP 203
Query: 232 PKDV 235
KDV
Sbjct: 204 SKDV 207
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/245 (58%), Positives = 164/245 (66%), Gaps = 23/245 (9%)
Query: 1 MDP-PLVNESSFS---AANPSSYSLAEIWP-FPINNGGAGDAGLRMGNMGHGFGESSALR 55
MDP ++NE SF+ + N + +SLAEIW FP G G GLR GHG G
Sbjct: 1 MDPGAMMNEGSFANNASGNTAPFSLAEIWQQFPPAISGGGGLGLRSPQFGHGPG------ 54
Query: 56 DGSMEESTVTEQSGGGCG--RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKN 113
G + T G G RKRRD S ED+S+K VST+ N +N+ +GK +K + ++
Sbjct: 55 -GQFGDFTTGPSHGLGPSNSRKRRD-SEEDDSAKGVSTS---NAVNEGDGKRVKGNRNEG 109
Query: 114 ENGSKAEVEASSAAGNKPAE-SSKP-SEPPK-DYIHVRARRGQATDSHSLAERARREKIS 170
+ KPAE S+KP SEPPK DYIHVRARRGQATDSHSLAERARREKIS
Sbjct: 110 GGDGGNNKGEGEVSSGKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKIS 169
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE F
Sbjct: 170 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNS--GIEAF 227
Query: 231 HPKDV 235
PKD
Sbjct: 228 PPKDF 232
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/244 (53%), Positives = 158/244 (64%), Gaps = 65/244 (26%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWP--FPINNGGAGDAGLRMGNMGHGFGESSALRDGS 58
M+PPL+N+S+FS+ANPS L+EIWP FP ++ +
Sbjct: 1 MEPPLINDSTFSSANPS---LSEIWPSHFPTDHTPS------------------------ 33
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGS- 117
+R LS ST +N S+G SGS+++NG+
Sbjct: 34 ----------------NKRHLSP--------STDCGSNKHIKSSG-----SGSQDQNGAL 64
Query: 118 -KAEVEASSAAGNK-PAESSKPS---EPPK-DYIHVRARRGQATDSHSLAERARREKISE 171
EV+A+S AGNK P +++KPS +PPK DYIHVRARRGQATDSHSLAERARREKISE
Sbjct: 65 KAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERARREKISE 124
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
RMKILQD+VPGCNKVIGKALVLDEIINYIQSLQ QVEFLSMKLEAVNSR++++PTIE F
Sbjct: 125 RMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRLSMSPTIECFP 184
Query: 232 PKDV 235
K+V
Sbjct: 185 SKEV 188
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 156/244 (63%), Gaps = 65/244 (26%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWP--FPINNGGAGDAGLRMGNMGHGFGESSALRDGS 58
M+PPL+N+S+FS+ANPS L+EIWP FP ++ +
Sbjct: 1 MEPPLINDSTFSSANPS---LSEIWPSHFPTDHTPS------------------------ 33
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGS- 117
+R LS ST +N S+G SGS+++NG+
Sbjct: 34 ----------------NKRHLSP--------STDCGSNKHIKSSG-----SGSQDQNGAL 64
Query: 118 -KAEVEASSAAGNK-PAESSKPS---EPPK-DYIHVRARRGQATDSHSLAERARREKISE 171
EV+A+S AGNK P +++KPS +PPK DYIHVRARRGQATDSHSLAERARREKISE
Sbjct: 65 KAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERARREKISE 124
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 231
RMKILQD+VPGCNKVIGKALVLDEIINYIQSLQ QVEFL MKLEAVNSR++++P IE F
Sbjct: 125 RMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKLEAVNSRLSMSPIIECFP 184
Query: 232 PKDV 235
K+V
Sbjct: 185 SKEV 188
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/263 (52%), Positives = 158/263 (60%), Gaps = 63/263 (23%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME 60
MDPPL+N+S+FS+A ++LAEIWP P GG D E
Sbjct: 1 MDPPLINDSTFSSA----FALAEIWPRP---GGGAD-----------------------E 30
Query: 61 ESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDL--NDSNGKWMKTSG--SKNENG 116
STVT+ + R+ S + +T+S +D NDS K ++ G S ENG
Sbjct: 31 HSTVTQLTAAA-----RNHGSRIKMKNNNDSTTSEDDCSKNDSGNKRIRLGGGGSTVENG 85
Query: 117 SKAEV---EASSAAG--NKPAESSKPSE--PPK-DYIHVRARRGQATDSHSLAER----- 163
+ EASS AG N +S+KPSE PPK DYIHVRARRGQATDSHS+AER
Sbjct: 86 GGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERVIHFS 145
Query: 164 -----------ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
ARREKISERMKILQDLVPGCNK+IGKALVLDEIINYIQSLQ QVEFLSM
Sbjct: 146 LCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 205
Query: 213 KLEAVNSRMNLTPTIEGFHPKDV 235
KLEAVNSR NL PT EGF KD
Sbjct: 206 KLEAVNSRANLNPTNEGFPSKDF 228
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 155/240 (64%), Gaps = 26/240 (10%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDA-GLRMGNMGHG-FGESSALRDGS 58
MDP + AAN +S+ L+EIW FP N + DA GLR + HG F + +
Sbjct: 1 MDPAAIMNG---AANTTSFHLSEIWQFPPPN--SPDALGLRRPHFAHGSFADFAPGPTRD 55
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSK 118
+ +++ + + R E+ES+K STT++ ++ +GK +K S E+G
Sbjct: 56 ADPASIAHK------KPRHAAGEEEESAKGASTTNAVDEGGGGDGKRIKAS----ESGEG 105
Query: 119 AEVEASSAAGNKPAESS--KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKI 175
+S KPAE S PSEPPK DYIHVRARRGQATDSHSLAERARREKISERMK
Sbjct: 106 GRENSS----GKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKT 161
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ EFLSMKLEAVNSRM IE F PKD
Sbjct: 162 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMES--GIEVFPPKDF 219
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 143/222 (64%), Gaps = 26/222 (11%)
Query: 18 SYSLAEIWPFPINNGGAGDA-GLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKR 76
SY L+EIW FP N A DA GLR + G + +KR
Sbjct: 15 SYHLSEIWHFPPPN--APDALGLRRAHFA----------PGPTRHAVPGRDLASIAPKKR 62
Query: 77 RDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESS- 135
R E+ S ++T++A D +GK +KTS S K E E+ S KPA+ S
Sbjct: 63 RQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSES-----GKGEGESCSG---KPAKQSG 114
Query: 136 -KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
PSEPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL
Sbjct: 115 KPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 174
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DEIINYIQSLQRQVEFLSMKLEAVNSR + P IE F PKD
Sbjct: 175 DEIINYIQSLQRQVEFLSMKLEAVNSR--IAPGIEVFPPKDF 214
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 147/229 (64%), Gaps = 27/229 (11%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGESS---------ALRDGSMEESTVTEQS 68
++LAEIW FP+N AGD+ R + FG++ A ++ ++ + S
Sbjct: 13 FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G KRR+ E +S+KIVST ++ N K KAE E+ G
Sbjct: 73 GAW---KRRE--DESKSAKIVSTIGASEGEN-------KRQKIDEVCDGKAEAES---LG 117
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+ + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 118 TETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 177
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+V +
Sbjct: 178 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEVMI 224
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 147/229 (64%), Gaps = 27/229 (11%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGESS---------ALRDGSMEESTVTEQS 68
++LAEIW FP+N AGD+ R + FG++ A ++ ++ + S
Sbjct: 13 FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G KRR+ E +S+KIVST ++ N K KAE E+ G
Sbjct: 73 GAW---KRRE--DESKSAKIVSTIGASEGEN-------KRQKIDEVCDGKAEAES---LG 117
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+ + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 118 TETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 177
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+V +
Sbjct: 178 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEVMI 224
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 147/229 (64%), Gaps = 27/229 (11%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGESS---------ALRDGSMEESTVTEQS 68
++LAEIW FP+N AGD+ R + FG++ A ++ ++ + S
Sbjct: 7 FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 66
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G KRR+ E +S+KIVST ++ N K KAE E+ G
Sbjct: 67 GAW---KRRE--DESKSAKIVSTIGASEGEN-------KRQKIDEVCDGKAEAES---LG 111
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+ + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 112 TETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 171
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+V +
Sbjct: 172 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEVMI 218
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 145/227 (63%), Gaps = 27/227 (11%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGESS---------ALRDGSMEESTVTEQS 68
++LAEIW FP+N AGD+ R + FG++ A ++ ++ + S
Sbjct: 13 FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTSANGDPARMSHALSQAVIEGIS 72
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G KRR+ E +S+KIVST ++ N K KAE E+ G
Sbjct: 73 GAW---KRRE--DESKSAKIVSTIGASEGEN-------KRQKIDEVCDGKAEAES---LG 117
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+ + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 118 TETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 177
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+
Sbjct: 178 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEF 222
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 145/227 (63%), Gaps = 27/227 (11%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGESS---------ALRDGSMEESTVTEQS 68
++LAEIW FP+N AGD+ R + FG++ A ++ ++ + S
Sbjct: 13 FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G KRR+ E +S+KIVST ++ N K KAE E+ G
Sbjct: 73 GAW---KRRE--DESKSAKIVSTIGASEGEN-------KRQKIDEVCDGKAEAES---LG 117
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+ + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 118 TETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 177
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+
Sbjct: 178 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEF 222
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 147/242 (60%), Gaps = 62/242 (25%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWP--FPINNGGAGDAGLRMGNMGHGFGESSALRDGS 58
M+P L N+S+FS+ANPS L+EIWP FP ++
Sbjct: 1 MEPLLFNDSTFSSANPS---LSEIWPSHFPSDH--------------------------- 30
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSK 118
RKRR LS +S+ SA + D NG +K
Sbjct: 31 -------------TPRKRR-LSPSSDSASNKHIKLSAPESQDQNGA-LKV---------- 65
Query: 119 AEVEASSAAGNK-PAESSKPSE----PPKDYIHVRARRGQATDSHSLAERARREKISERM 173
EV+A+S AGNK P ++ KPS P +DYIHVRARRGQATD+HSLAERARREKISERM
Sbjct: 66 GEVDATSVAGNKLPQQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERM 125
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPK 233
KILQDLVPGCNKVIGKA VLD IINY+QSLQRQVEFLSMKLEAV+SR+++ PT+E F K
Sbjct: 126 KILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVSSRLSMKPTLECFPSK 185
Query: 234 DV 235
+V
Sbjct: 186 EV 187
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/162 (66%), Positives = 120/162 (74%), Gaps = 5/162 (3%)
Query: 76 RRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGS-KAEVEASSAAGNKPAES 134
R L+SE++SS+IVST+ DL D K KT+ S N NGS + E E + K
Sbjct: 50 RETLASEEDSSRIVSTSGGGQDLTDPEAKRSKTNKSSNNNGSLRTEAETDPRSAGKAVSK 109
Query: 135 SKPS-EPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
S P+ EPPK DYIHVRARRGQATDSHSLAERARREKISERMK+LQDLVPGCNKVIGKA V
Sbjct: 110 SLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASV 169
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
LDEIINYIQSLQ QVEFLSMKLEAVN+ N +E F KD
Sbjct: 170 LDEIINYIQSLQCQVEFLSMKLEAVNAHANQ--GVEAFPVKD 209
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 142/225 (63%), Gaps = 23/225 (10%)
Query: 19 YSLAEIWPFPINN-GGAGDAGLRMGNMGHGFGES--SALRDG-----SMEESTVTEQSGG 70
++LAEIW FP+N AGD+ R + FG++ +A +G S S +
Sbjct: 13 FNLAEIWQFPLNGVSTAGDSSRRSFAGPNQFGDTDLTAAANGDPARMSHVLSQAVIEGIS 72
Query: 71 GCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNK 130
G ++R D E +S KIVS ++ N K KAE E+ G +
Sbjct: 73 GAWKRRED---ESKSVKIVSINGASEGEN-------KRQKIDEVCDGKAEAES---LGTE 119
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
+ EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 120 TEQKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 179
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+
Sbjct: 180 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEF 222
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/144 (72%), Positives = 114/144 (79%), Gaps = 6/144 (4%)
Query: 96 NDLNDSNGKWMKTSGSKNENGS--KAEVEASSAAGNKPA-ESSKPSEPPK-DYIHVRARR 151
ND DS K +K S++E + K E EASS NK A ++++P E PK DYIHVRARR
Sbjct: 4 NDATDSEAKCLKGMKSRDEETANQKXEAEASSGLCNKLADQNTQPLEAPKQDYIHVRARR 63
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLS
Sbjct: 64 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 123
Query: 212 MKLEAVNSRMNLTPTIEGFHPKDV 235
MKLEAVNSR N IEGF PKD
Sbjct: 124 MKLEAVNSRTN--SGIEGFPPKDF 145
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 119/159 (74%), Gaps = 7/159 (4%)
Query: 81 SEDESSKIVSTTSSA--NDLNDSNGKWMKTSGSKNENGS-KAEVEASSAAGNKPAESSKP 137
SED+SS+IVST+ DL D K KT+ S N GS + EVE S + K + P
Sbjct: 55 SEDDSSRIVSTSGGGGGQDLTDLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIP 114
Query: 138 S-EPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
+ EPPK DYIHVRARRGQATDSHSLAERARREKISERMK+LQDLVPGCNKVIGKA VLDE
Sbjct: 115 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 174
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
IINYIQSLQ QVEFLSMKLEAVN++ N +E F KD
Sbjct: 175 IINYIQSLQCQVEFLSMKLEAVNAQAN--QGVEVFPAKD 211
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 110/135 (81%), Gaps = 4/135 (2%)
Query: 101 SNGKWMKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHS 159
S GK +KT+ +++N SK E E S + ++ + P +P +DYIHVRARRGQATDSHS
Sbjct: 1 SGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPT-PEQPKQDYIHVRARRGQATDSHS 59
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS
Sbjct: 60 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 119
Query: 220 RMNLTPTIEGFHPKD 234
R+ P IE F PKD
Sbjct: 120 RIG--PGIEVFPPKD 132
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 119/164 (72%), Gaps = 8/164 (4%)
Query: 82 EDESSKIVSTTSSA---NDLNDSNGKWMKTSGSKNENGS---KAEVEASSAAGNKPAESS 135
ED+SS+IVST+ DL DS K K S S +N S +AE ++ +A+ +
Sbjct: 24 EDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPP 83
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
P P +DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDE
Sbjct: 84 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 143
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
IINYIQ+LQRQVEFLSMKLEAVN+ +N IE F PKD +
Sbjct: 144 IINYIQALQRQVEFLSMKLEAVNAHVN--NGIEAFPPKDFGAQV 185
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 119/164 (72%), Gaps = 8/164 (4%)
Query: 82 EDESSKIVSTTSSA---NDLNDSNGKWMKTSGSKNENGS---KAEVEASSAAGNKPAESS 135
ED+SS+IVST+ DL DS K K S S +N S +AE ++ +A+ +
Sbjct: 65 EDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPP 124
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
P P +DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDE
Sbjct: 125 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 184
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
IINYIQ+LQRQVEFLSMKLEAVN+ +N IE F PKD +
Sbjct: 185 IINYIQALQRQVEFLSMKLEAVNAHVN--NGIEAFPPKDFGAQV 226
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 136/217 (62%), Gaps = 27/217 (12%)
Query: 44 MGHGFGESSALRD-----GSMEESTVTEQSGGG----------CGRKRRDLSS--EDESS 86
MG ++S L+D S EES ++EQ+ G RKR+ S E+S
Sbjct: 258 MGTQENKNSPLQDLMEVANSQEESAISEQTPNGDTGEKPSPYVNSRKRKGPSKGKAKETS 317
Query: 87 KIVSTTSSANDLNDSNGKWMKTS-GSKNENGSKAEVEASSAAGNKPAE-------SSKPS 138
+ +A +DSN K K + G NENG E S N A +SKP
Sbjct: 318 TSTNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNSNANDEKQNKSNSKPP 377
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIIN
Sbjct: 378 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 437
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
Y+QSLQRQVEFLSMKL +VN+R++ +IE KD+
Sbjct: 438 YVQSLQRQVEFLSMKLASVNTRLDF--SIESLISKDI 472
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 130/193 (67%), Gaps = 17/193 (8%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDLSSE---DESSKIVSTTSSANDLNDSNGK 104
S EEST++EQ+ G ++R SS+ E+S + T DSN K
Sbjct: 235 SQEESTISEQAPNGEIGVKTSQDMMNSRKRKASSKGKAKETSNSFNPTKGVEGSEDSNSK 294
Query: 105 WMKTS-GSKNENGSKAEVEASSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAE 162
K + G NENG E S A K +S SKP EPPKDYIHVRARRGQATDSHSLAE
Sbjct: 295 RSKPNEGDGNENGQVKVEEESKAEEEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAE 354
Query: 163 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
R RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+RM+
Sbjct: 355 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMD 414
Query: 223 LTPTIEGFHPKDV 235
L +IE KDV
Sbjct: 415 L--SIENLISKDV 425
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 16/191 (8%)
Query: 58 SMEESTVTEQSGGGC-GRKRRDLSSEDESSKIVSTTS------SANDLNDSNGKWMKTSG 110
S EEST++EQ C ++R SS ++ + V++T+ ++ D N GK + G
Sbjct: 189 SQEESTISEQKPSPCVNSRKRKASSRGKAKETVNSTNPPMDAEASEDQNAKRGKPNEDEG 248
Query: 111 SKNENGS-KAEVEA---SSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERA 164
K +NGS KAE ++ +S+ G++ SSKP EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 249 -KEKNGSVKAEEDSKAGTSSGGDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERV 307
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY++SLQRQVEFLSMKL +VN+R++
Sbjct: 308 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDF- 366
Query: 225 PTIEGFHPKDV 235
+ E KD+
Sbjct: 367 -STESLISKDI 376
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/162 (63%), Positives = 119/162 (73%), Gaps = 6/162 (3%)
Query: 82 EDESSKIVSTTSSA---NDLNDSNGKWMKTSGSKNEN-GSKAEVEASSAAGNKPAESSKP 137
ED+SS+IVST+ DL DS K K S S N + ++AE ++ +A+ + P
Sbjct: 65 EDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSDNSSLRTEAETDSRNASKSGDQNPPPP 124
Query: 138 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
P +DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDEII
Sbjct: 125 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 184
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
NYIQ+LQRQVEFLSMKLEAVN+ +N IE F PKD +
Sbjct: 185 NYIQALQRQVEFLSMKLEAVNAHVN--NGIEAFPPKDFGAQV 224
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 118/164 (71%), Gaps = 8/164 (4%)
Query: 82 EDESSKIVSTTSSA---NDLNDSNGKWMKTSGSKNENGS---KAEVEASSAAGNKPAESS 135
ED+SS+IVS + DL DS K K S S +N S +AE ++ +A+ +
Sbjct: 65 EDDSSRIVSASGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPP 124
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
P P +DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDE
Sbjct: 125 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 184
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
IINYIQ+LQRQVEFLSMKLEAVN+ +N IE F PKD +
Sbjct: 185 IINYIQALQRQVEFLSMKLEAVNAHVN--NGIEAFPPKDFGAQV 226
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 15/191 (7%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMK 107
S EEST++EQ+ G ++R SS+ ++ + +TT+ + S K
Sbjct: 270 SQEESTISEQTPNGEIGVKTSQDIMNSRKRKASSKGKAKETSNTTNPTKGVEGSEYSNSK 329
Query: 108 TSGSK--NENGSKAEVEASSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAERA 164
S NENG E S A K ++S SKP EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 330 RSKPNEGNENGQVKVEEESKAEEEKQSKSNSKPPEPPKDYIHVRARRGQATDSHSLAERV 389
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+RM+L
Sbjct: 390 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDL- 448
Query: 225 PTIEGFHPKDV 235
+IE KDV
Sbjct: 449 -SIESLVTKDV 458
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 140/222 (63%), Gaps = 33/222 (14%)
Query: 44 MGHGFGESSALRD-----GSMEESTVTEQSGGG----------CGRKRRDLSS--EDESS 86
MG ++S L+D S EEST++EQ+ G RKR+ S E+S
Sbjct: 253 MGTQENKNSPLQDLMELANSQEESTISEQTPNGDTGVKPSPYVNSRKRKGPSKGKAKETS 312
Query: 87 KIVS-----TTSSANDLNDSNGKWMK-TSGSKNENGSKAEVEASSAAGNKPAE------- 133
++ + +A D N K K +G NENG + + E S GN A
Sbjct: 313 ASINPPMGLSLQAAEASEDWNAKRSKPNAGEGNENG-QVKAEEESKGGNSNANDEKQNKS 371
Query: 134 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
+SKP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+L
Sbjct: 372 NSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 431
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DEIINY+QSLQRQVEFLSMKL +VN+R++ +IE KD+
Sbjct: 432 DEIINYVQSLQRQVEFLSMKLASVNTRLDF--SIESLISKDI 471
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 155/255 (60%), Gaps = 34/255 (13%)
Query: 8 ESSFSAANPSSYSLAEIWPFPIN-----NGGAGDAGLRM---GNMGHGFGESSALR---- 55
E SF + SSYSL ++PF + N +++ ++ H SS++R
Sbjct: 57 EGSFRPVD-SSYSLDALFPFSVPVLDKVNRRTHQQNVKLVSERSLQHNL--SSSIRVQQP 113
Query: 56 ------DGSMEESTVTEQSGGGCGRKRRDLSSEDE--SSKIVSTTSSANDLNDSNGKWMK 107
+ S EE + +EQS GG RKRR L ++ ++ S N N+S K K
Sbjct: 114 GIEQKCNTSGEECSSSEQSTGG--RKRRTLPNDKARFHDSTFTSPSEKNTENESKSKRPK 171
Query: 108 TSGSKNENG-SKAEVEASSAAGN------KPAESSKPSEPPKDYIHVRARRGQATDSHSL 160
++ + EN SK++ E + G + +S+KP EPPKDYIHVRARRGQATD HSL
Sbjct: 172 SAEAMKENDDSKSDAEQRTHTGRPEVNPRQSEQSAKPPEPPKDYIHVRARRGQATDRHSL 231
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RREKI ERMK+LQDLVPGCNK+ GKA+++DEIINY+QSLQ QVEFLSMKLEAVN +
Sbjct: 232 AERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLSMKLEAVNPK 291
Query: 221 MNLTPTIEGFHPKDV 235
L +EGF +D+
Sbjct: 292 --LACNMEGFLARDM 304
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 4/169 (2%)
Query: 58 SMEESTVTEQS--GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNEN 115
S EES+V+EQ+ K+R + + +S + S+ + D N ++ G++ +N
Sbjct: 259 SQEESSVSEQNPPNAELNSKKRKTAPKAKSKEAPQPNSAKDAEVDDNSNAKRSKGNE-KN 317
Query: 116 GSKAEVEASSAAGNKPAE-SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 174
KAE E +K + S+KP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK
Sbjct: 318 DVKAEEEHKGNGDDKQNKASTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 377
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+++
Sbjct: 378 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDI 426
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 134/204 (65%), Gaps = 19/204 (9%)
Query: 37 AGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGG----------CGRKRRDLSS----E 82
G + GN + S L + +ES+V+EQ G RKR+ LS +
Sbjct: 233 VGSQKGNKSTPLQDRSELTNS--QESSVSEQIPSGEAGLKASNELNSRKRKALSKGKAKQ 290
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTS-GSKNENGS-KAEVEASSAAGN-KPAESSKPSE 139
S+ S T A ++SN K +K + G +NEN KAE E + + + +S+P E
Sbjct: 291 SASNPPASATKDAETDDNSNTKRIKPNEGEENENSPVKAEEEPKGSGDDIQNKANSRPPE 350
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY
Sbjct: 351 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 410
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNL 223
+QSLQRQVEFLSMKL +VN+R++
Sbjct: 411 VQSLQRQVEFLSMKLASVNTRLDF 434
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 142/223 (63%), Gaps = 37/223 (16%)
Query: 18 SYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRR 77
+Y L EIW R ++ G+ D S+++ T +EQ RK
Sbjct: 4 AYHLPEIW------------QSRPPHLAPGYP------DFSIQDLT-SEQKPLNHARKIT 44
Query: 78 DLSSEDESSKIVSTTS-----SANDLNDS--NGKWMKTSGSKNENGSKAEVEASSAAGNK 130
+++ED S + VSTT+ ++N +ND +GK KTSG+ SK E +++G
Sbjct: 45 RVTNED-SVQCVSTTNGGARGNSNAVNDDGGDGKRSKTSGN-----SKGE---ENSSGKH 95
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
E+S P KDYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNKVIGKA
Sbjct: 96 AEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKA 155
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPK 233
LVLDEIINYIQSL QVEFLSMKLEAVNSR TP +E F PK
Sbjct: 156 LVLDEIINYIQSLHHQVEFLSMKLEAVNSRP--TPGMEVFPPK 196
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/115 (80%), Positives = 97/115 (84%), Gaps = 3/115 (2%)
Query: 122 EASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
EA ++G ++P EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLV
Sbjct: 48 EAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 107
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RMN P IE F KD
Sbjct: 108 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMN--PGIEVFASKDF 160
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/93 (91%), Positives = 87/93 (93%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 203 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQ QVEFLSMKLEAVNSR N+ PTI+ F KDV
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%), Gaps = 3/26 (11%)
Query: 1 MDPPLVNESSFSAANPSSYSLAEIWP 26
M+PPL N+S+FS+ANP SL+EIWP
Sbjct: 1 MEPPLFNDSTFSSANP---SLSEIWP 23
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/251 (47%), Positives = 140/251 (55%), Gaps = 43/251 (17%)
Query: 1 MDPP-LVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSM 59
MDPP ++NE Y+L EIW FPIN G G L ++
Sbjct: 4 MDPPAMMNEGG-------PYTLEEIWQFPINGSGRGQFELL-----------------NL 39
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND---LNDSNGKWMKTSGSKNENG 116
E D SS + + + T ++ N LND +GK +K GS+++N
Sbjct: 40 ERRAAASARKRREVDLDVDDSSSSKPTTLSPTNANTNTNGLLNDCDGKRLKAWGSRDDNH 99
Query: 117 ------------SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 164
S++E E SS + +DYIHVRARRGQATDSHSLAERA
Sbjct: 100 HHQQQQQQQQHDSRSEAEPSSGKLVEHKPQPPEPPK-QDYIHVRARRGQATDSHSLAERA 158
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
RREKISERMKILQD+VPGCNKV GKALVLDEIINYIQSLQRQVEFLSMKLEAVN +N+
Sbjct: 159 RREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLSMKLEAVN--LNMN 216
Query: 225 PTIEGFHPKDV 235
P E F KD
Sbjct: 217 PETEVFPSKDF 227
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 131/181 (72%), Gaps = 9/181 (4%)
Query: 62 STVTEQSGGGCGRKRRDLSSE--DESSKIVST--TSSANDLNDSNGKWMKTSGSKNENGS 117
S VT++S GG R RRD+++ D+SS +VST T + DL D K +K S + +G+
Sbjct: 20 SVVTDRSNGGRRRARRDVAAHHGDDSSMLVSTSGTGAGQDLADPEEKRLKKMESDSADGN 79
Query: 118 -KAEVEASSAAGNKPAESS-KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMK 174
+ + S +K + + P EPPK DYIHVRARRGQATDSHS+AERARREKISERMK
Sbjct: 80 LRTNAQTDSGNASKVVDRNPTPPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMK 139
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
+LQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N I F KD
Sbjct: 140 MLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NRIASFQSKD 197
Query: 235 V 235
V
Sbjct: 198 V 198
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 127/181 (70%), Gaps = 14/181 (7%)
Query: 68 SGGGCGRKRRDLS-------SEDESSKIVSTTSS--ANDLNDSNGKWMKTSGSKNENGS- 117
+G GR+RR SED+SS+ VST+ + DL DS K + + S ++NGS
Sbjct: 23 TGQSNGRRRRQQPRTEPPPPSEDDSSRPVSTSGGGGSQDLIDSEAKRFRANKSSDDNGSF 82
Query: 118 KAEVEASSAAGNKPAESSKPSEP--PKDYIHVRARRGQATDSHSLAERARREKISERMKI 175
+ + E S G+K + + P +DYIHVRARRGQATDSHSLAERARREKI+ERMKI
Sbjct: 83 RTDAEGDSRNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKI 142
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQDLVPGCNKVIGKA VLDEIINY+Q+L+RQVEFLSMKLEAVN+ +N +E F KD
Sbjct: 143 LQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLEAVNAHVNN--GVETFPSKDF 200
Query: 236 S 236
S
Sbjct: 201 S 201
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 115/163 (70%), Gaps = 11/163 (6%)
Query: 77 RDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK 136
+DL+ E+ K + +N D++ K K + S +ENG K + + S+ SK
Sbjct: 220 KDLAKEESGGKRCKSADESNGAEDNSTKG-KAAQSNSENGGKKQGKDST---------SK 269
Query: 137 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
P EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEI
Sbjct: 270 PPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEI 329
Query: 197 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
INY+QSLQRQVEFLSMKL VN +++ + PKD+ S
Sbjct: 330 INYVQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLPKDIHQSC 371
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 112/151 (74%), Gaps = 12/151 (7%)
Query: 82 EDESSKIVSTTSSA-------NDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAES 134
+D+ SK+VST++++ D + K +K S ++N S EA + +GN +
Sbjct: 53 DDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDS-LRTEAGTDSGNSSKAA 111
Query: 135 SK---PSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
K P EPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 112 DKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 171
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
VLDEIINYIQSLQ QVEFLSMKLEAVNS M
Sbjct: 172 SVLDEIINYIQSLQHQVEFLSMKLEAVNSHM 202
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 7/139 (5%)
Query: 102 NGKWMKTS--GSKNENGSKAEVEASS---AAGNKPAESSKPSEPPKDYIHVRARRGQATD 156
NGK +K K +G+K + EA S A + +SSKP EPPKDYIHVRARRGQATD
Sbjct: 303 NGKKIKPDEVTKKEIDGAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATD 362
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
SHSLAER RREKIS+RMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL
Sbjct: 363 SHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 422
Query: 217 VNSRMNLTPTIEGFHPKDV 235
VN RM+ +E PKD+
Sbjct: 423 VNPRMDF--NMETLVPKDI 439
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 111/162 (68%), Gaps = 13/162 (8%)
Query: 73 GRKRRDLSSE---DESSKIVSTTSSANDLNDSNGKWMKTSGSKNE-----NGSKAEVEAS 124
GRKRR LS + D SS + T+S D GK + +K E NG +
Sbjct: 290 GRKRRTLSEDKLKDGSSCV--TSSGIKDGEQVKGKRQRNPNAKEESKQHGNGKADRSSSD 347
Query: 125 SAAGNKPA---ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
++ P E++KP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVP
Sbjct: 348 NSGSTSPKSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 407
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
GCNKV GKA++LDEIINY+QSLQRQVEFLSMKL AVN R+
Sbjct: 408 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEF 449
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 124/186 (66%), Gaps = 19/186 (10%)
Query: 58 SMEESTVTEQS--GGGCG---------RKRRDLSSEDESSKIVSTTSSANDL-NDSNGKW 105
S EES ++EQ+ G G RKR+ SS+ ++ + T D N K
Sbjct: 183 SQEESKISEQNTPNGEIGVKASPDMNSRKRKASSSKGKAPNSTNPTKGVEGSGEDFNAKK 242
Query: 106 MKTS-GSKNENGSK-AEVEASSAAGNKPAES-----SKPSEPPKDYIHVRARRGQATDSH 158
+K + G +NENG + E E N E SKP EP KDYIHVRARRGQATDSH
Sbjct: 243 IKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSH 302
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
SLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN
Sbjct: 303 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVN 362
Query: 219 SRMNLT 224
++M+L+
Sbjct: 363 TKMDLS 368
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 128/195 (65%), Gaps = 20/195 (10%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDLSSEDESSKIVSTTSSANDLN---DSNGK 104
S EES+++EQ GG RKR+ + ++ + S++ SA+D+ +++
Sbjct: 264 SREESSLSEQVPGGKLSMKSQNDANSRKRKSIP-RGKAKETPSSSPSASDVKVAAENDES 322
Query: 105 WMKTSGSKNENGSKA----EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSL 160
K S S NGS E E + + +SKP EPPKDYIHVRARRGQATDSHSL
Sbjct: 323 KAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVRARRGQATDSHSL 382
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL +VN R
Sbjct: 383 AERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSSVNPR 442
Query: 221 MNLTPTIEGFHPKDV 235
M + +E KD+
Sbjct: 443 MEI--NMETLLSKDI 455
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 112/160 (70%), Gaps = 10/160 (6%)
Query: 80 SSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSE 139
+ E+ S K + +N +++GK + S ++NG K + + + SKP E
Sbjct: 194 TKEESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGA---------SKPPE 244
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY
Sbjct: 245 PPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINY 304
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
+QSLQRQVEFLSMKL VN +++ + PKD+ S
Sbjct: 305 VQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLPKDMHQSC 343
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 103/142 (72%), Gaps = 8/142 (5%)
Query: 82 EDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPP 141
ED S K +T +N + N K + S +ENG + S SSKP EPP
Sbjct: 220 EDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS--------SSKPPEPP 271
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
KDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+Q
Sbjct: 272 KDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQ 331
Query: 202 SLQRQVEFLSMKLEAVNSRMNL 223
SLQRQVEFLSMKL VN +++
Sbjct: 332 SLQRQVEFLSMKLATVNPQLDF 353
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 108/152 (71%), Gaps = 11/152 (7%)
Query: 75 KRRDLSS---EDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKP 131
+R LSS ED S K +T +N + N K + S +ENG + S
Sbjct: 212 ERFHLSSVLQEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS------ 265
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
SSKP EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA+
Sbjct: 266 --SSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 323
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 324 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDF 355
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 124/193 (64%), Gaps = 31/193 (16%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDL----SSEDESSKIVSTTSSANDLNDSNG 103
S EES+V+EQ GG GRKR+ + + E SS A+D ++SN
Sbjct: 260 SREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA 319
Query: 104 KWMKT---SGSKNE--------NGSKAEVEASSAAGNKPA--ESSKPSEPPKDYIHVRAR 150
K K SGS+ + NGS S+ GN+ ++ KP E PKDYIHVRAR
Sbjct: 320 KRSKPDEGSGSEKDAAKAKAEANGSTK----SAGDGNQKQSKDNPKPPEAPKDYIHVRAR 375
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
RGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 376 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
Query: 211 SMKLEAVNSRMNL 223
SMKL VN RM+
Sbjct: 436 SMKLATVNPRMDF 448
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 124/193 (64%), Gaps = 31/193 (16%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDL----SSEDESSKIVSTTSSANDLNDSNG 103
S EES+V+EQ GG GRKR+ + + E SS A+D ++SN
Sbjct: 151 SREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA 210
Query: 104 KWMKT---SGSKNE--------NGSKAEVEASSAAGNKPA--ESSKPSEPPKDYIHVRAR 150
K K SGS+ + NGS S+ GN+ ++ KP E PKDYIHVRAR
Sbjct: 211 KRSKPDEGSGSEKDAAKAKAEANGSTK----SAGDGNQKQSKDNPKPPEAPKDYIHVRAR 266
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
RGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 267 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 326
Query: 211 SMKLEAVNSRMNL 223
SMKL VN RM+
Sbjct: 327 SMKLATVNPRMDF 339
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 104/144 (72%), Gaps = 8/144 (5%)
Query: 80 SSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSE 139
+ ED S K +T +N + N K + S +ENG + S SSKP E
Sbjct: 15 AKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS--------SSKPPE 66
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY
Sbjct: 67 PPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINY 126
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNL 223
+QSLQRQVEFLSMKL VN +++
Sbjct: 127 VQSLQRQVEFLSMKLATVNPQLDF 150
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 124/193 (64%), Gaps = 31/193 (16%)
Query: 58 SMEESTVTEQSGGG----------CGRKRRDL----SSEDESSKIVSTTSSANDLNDSNG 103
S EES+V+EQ GG GRKR+ + + E SS A+D ++SN
Sbjct: 260 SREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA 319
Query: 104 KWMKT---SGSKNE--------NGSKAEVEASSAAGNKPA--ESSKPSEPPKDYIHVRAR 150
K K SGS+ + NGS S+ GN+ ++ KP E PKDYIHVRAR
Sbjct: 320 KRSKPDEGSGSEKDAAKAKAEANGSTK----SAGDGNQKQSKDNPKPPEAPKDYIHVRAR 375
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
RGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 376 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
Query: 211 SMKLEAVNSRMNL 223
SMKL VN RM+
Sbjct: 436 SMKLATVNPRMDF 448
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%), Gaps = 10/160 (6%)
Query: 80 SSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSE 139
+ E+ S K + +N +++GK + S ++NG K + + + SKP E
Sbjct: 194 TKEESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGA---------SKPPE 244
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PPKDYIH RARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY
Sbjct: 245 PPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINY 304
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
+QSLQRQVEFLSMKL VN +++ + PKD+ S
Sbjct: 305 VQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLPKDMHQSC 343
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 111/159 (69%), Gaps = 15/159 (9%)
Query: 74 RKRRDLSSED--ESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKP 131
RKR+ + S + ES S T+S + ++ NG GSK SK +V SS G +
Sbjct: 115 RKRKSIPSGNGKESPASSSLTASNSKVSGENG------GSKGGKRSKQDVAGSSKNGVEK 168
Query: 132 AES-------SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
+S +KP E PKDYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN
Sbjct: 169 CDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCN 228
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
++ GKA++LDEIINY+QSLQRQVEFLSMKL VN RM
Sbjct: 229 RITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEF 267
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 22/184 (11%)
Query: 58 SMEESTVTEQSGGG------------CGRKRRDLSSEDESSKIVSTTSSANDL------N 99
S EES+++EQ GG RKR+ + ++ + S++ SA+D+ +
Sbjct: 243 SREESSLSEQIPGGELSIKVQNNNDFSVRKRKAIP-RGKAKETPSSSPSASDVKVAAEKD 301
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHS 159
+S K K+ + + +KAE + + NK +++K EPPKDYIHVRARRGQATDSHS
Sbjct: 302 ESTAKRSKSDEANGHDKAKAE-QNGNQKQNK--DNTKLPEPPKDYIHVRARRGQATDSHS 358
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
LAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 359 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 418
Query: 220 RMNL 223
RM++
Sbjct: 419 RMDV 422
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 26 PFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDES 85
PFPINN +M + SS+ + +S G RKR+ S ++
Sbjct: 157 PFPINNEPPITTNEKMPRV------SSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSP 210
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI 145
S VS++ + DS+ K K S ENG K +K +P KDYI
Sbjct: 211 SA-VSSSKEIEEKEDSDPKRCKKS---EENGDK----------------TKSIDPYKDYI 250
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQR
Sbjct: 251 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 310
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN+R++ ++ KD+
Sbjct: 311 QVEFLSMKLSSVNTRLDF--NMDALLSKDI 338
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 109/154 (70%), Gaps = 5/154 (3%)
Query: 74 RKRRDLSSED--ESSKIVSTTSSANDLNDSNG--KWMKTSGSKNENGSKAEVEASSAAGN 129
RKR+ + S + ES S T+S + ++ NG K K S SK VE + G+
Sbjct: 118 RKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEAGSSKNGVEKCDSKGD 177
Query: 130 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
+ +KP E PKDYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GK
Sbjct: 178 N-KDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGK 236
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
A++LDEIINY+QSLQRQVEFLSMKL VN RM
Sbjct: 237 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEF 270
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 26 PFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDES 85
PFPINN +M + SS+ + +S G RKR+ S ++
Sbjct: 163 PFPINNEPPITTNEKMPRV------SSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSP 216
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI 145
S VS++ + DS+ K K S ENG K +K +P KDYI
Sbjct: 217 SA-VSSSKEIEEKEDSDPKRCKKS---EENGDK----------------TKSIDPYKDYI 256
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQR
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN+R++ ++ KD+
Sbjct: 317 QVEFLSMKLSSVNTRLDF--NMDALLSKDI 344
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 26 PFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDES 85
PFPINN +M + SS+ + +S G RKR+ S ++
Sbjct: 163 PFPINNEPPITTNEKMPRV------SSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSP 216
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI 145
S VS++ + DS+ K K S ENG K +K +P KDYI
Sbjct: 217 SA-VSSSKEIEEKEDSDPKRCKKS---EENGDK----------------TKSIDPYKDYI 256
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQR
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN+R++ ++ KD+
Sbjct: 317 QVEFLSMKLSSVNTRLDF--NMDALLSKDI 344
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 83/91 (91%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
E++KP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 44 ENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 103
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIINY+QSLQRQVEFLSMKL AVN R+
Sbjct: 104 LDEIINYVQSLQRQVEFLSMKLAAVNPRLEF 134
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/163 (60%), Positives = 112/163 (68%), Gaps = 24/163 (14%)
Query: 82 EDESSKIVSTTSSA-------NDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAES 134
+D+ SK+VST++++ D + K +K S ++N S EA + +GN +
Sbjct: 53 DDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDS-LRTEAGTDSGNSSKAA 111
Query: 135 SK---PSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
K P EPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 112 DKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 171
Query: 191 LVLDEIINYIQSLQRQVE------------FLSMKLEAVNSRM 221
VLDEIINYIQSLQ QVE FLSMKLEAVNS M
Sbjct: 172 SVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHM 214
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 112/163 (68%), Gaps = 10/163 (6%)
Query: 71 GCGRKRRDLSSEDESSKIVS-TTSSANDL---NDSNGKWMKT----SGSKNENGSKAEVE 122
G RKR+ K S +T+SA DL DS K K+ G +N KA
Sbjct: 178 GNARKRKAAGGSKGKGKDASVSTTSAKDLLAKEDSASKRCKSMSMEDGEENSGKGKAAQS 237
Query: 123 ASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
+S G K + +SK EPPKD+IHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLV
Sbjct: 238 SSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 297
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
PGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 298 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDF 340
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
++S P EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 13 DNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 72
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LDEIINY+QSLQRQVEFLSMK+ VN +M + +E F KD+
Sbjct: 73 LDEIINYVQSLQRQVEFLSMKMATVNPKMEI--NMETFLSKDI 113
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 112/163 (68%), Gaps = 10/163 (6%)
Query: 71 GCGRKRRDLSSEDESSKIVS-TTSSANDL---NDSNGKWMKT----SGSKNENGSKAEVE 122
G RKR+ K S +T+SA DL DS K K+ G +N KA
Sbjct: 178 GNARKRKAAGGSKGKGKDASVSTTSAKDLLAKEDSASKRCKSMSMEDGEENSGKGKAAQS 237
Query: 123 ASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
+S G K + +SK EPPKD+IHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLV
Sbjct: 238 SSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 297
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
PGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 298 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDF 340
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 91/110 (82%), Gaps = 5/110 (4%)
Query: 114 ENGSKAEVEASSAAGNKP-----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
+ GS + VE A KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+
Sbjct: 156 QAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRER 215
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 216 ISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVN 265
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 91/110 (82%), Gaps = 5/110 (4%)
Query: 114 ENGSKAEVEASSAAGNKP-----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
+ GS + VE A KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+
Sbjct: 156 QAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRER 215
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 216 ISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVN 265
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 114/176 (64%), Gaps = 9/176 (5%)
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGK---WM-KTSGSKNENGSKAEVEAS 124
GG RKR+ + +ST S + + + K W K S S E G K E
Sbjct: 215 GGEFPRKRKSVPKGKSKENPISTASPSPSFSKTAEKKEEWGGKGSKSSEEKGGKRRREDE 274
Query: 125 SAAGNKPAES--SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
+ + +KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPG
Sbjct: 275 DEEEGEGEGNNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPG 334
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN-SRMNLTPTIEGFHPKDVSL 237
CNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN +R++ ++ KDV +
Sbjct: 335 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDF--NVDALVSKDVMI 388
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 116/179 (64%), Gaps = 13/179 (7%)
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKN--ENGSKAEVEASSA 126
GG RKR+ + +ST S + + + K GSK+ E G K E
Sbjct: 215 GGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDD 274
Query: 127 AG-------NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
NK + ++KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDL
Sbjct: 275 EEEEGEGEGNK-SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 333
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN-SRMNLTPTIEGFHPKDVSL 237
VPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN +R++ ++ KDV +
Sbjct: 334 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDF--NVDALVSKDVMI 390
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 118/179 (65%), Gaps = 13/179 (7%)
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKN--ENGSK-------A 119
GG RKR+ + +ST S + + + K GSK+ E G K
Sbjct: 215 GGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDD 274
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E E GNK + ++KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDL
Sbjct: 275 EEEEGGGEGNK-SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 333
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN-SRMNLTPTIEGFHPKDVSL 237
VPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN +R++ ++ KDV +
Sbjct: 334 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDF--NVDALVSKDVMI 390
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 113/165 (68%), Gaps = 14/165 (8%)
Query: 71 GCGRKRRDLSSEDESSKIVSTTSSANDL---NDSNGKWMKT---SGSKNENGSKAEVEAS 124
G RKR+ + K S ++SA DL DS K K+ S EN +K + S
Sbjct: 184 GNARKRK--AGSKGKGKDSSMSTSAKDLLAKEDSAAKRCKSMEESNGAEENCAKGKAAQS 241
Query: 125 SAAGN------KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
S+ K A +SK EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQD
Sbjct: 242 SSENGGGKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQD 301
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 302 LVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDF 346
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 123/177 (69%), Gaps = 16/177 (9%)
Query: 73 GRKRRDLS---SEDESSKIVST---TSSANDLNDSNGKWMKTS--GSKNENGSKAEVEAS 124
GRKRR LS ++D S + S+ + + + ++S K K + GS ++ +K++ E S
Sbjct: 316 GRKRRVLSKAKAKDTPSAVASSGGRETKSLEADESPTKRYKGAEVGSNEKDDAKSKAEQS 375
Query: 125 ---SAAGNKPAESS---KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
S + P ++ K EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQD
Sbjct: 376 TILSTGESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 435
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ ++G KD+
Sbjct: 436 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NMDGLIAKDM 490
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 92/110 (83%), Gaps = 5/110 (4%)
Query: 114 ENGSKAEVEASSAAGN-KP----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
+ GS + VE A N KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+
Sbjct: 156 QAGSDSSVEDGGGAQNQKPPPGKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRER 215
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 216 ISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVN 265
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 97/129 (75%), Gaps = 6/129 (4%)
Query: 107 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 166
K + S +ENG + + +A PAE+ PKDYIHVRARRG+ATDSHSLAER RR
Sbjct: 246 KAAQSSSENGGGRKQQGKESATKPPAEA------PKDYIHVRARRGEATDSHSLAERVRR 299
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 226
EKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 300 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSL 359
Query: 227 IEGFHPKDV 235
PKD+
Sbjct: 360 PNLLLPKDI 368
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Query: 134 SSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
SSKP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIINY+QSLQ+QVEFLSMKL VN +++
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 11/130 (8%)
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSA-----------AGNKPAESSKPSEPPKDYIHVR 148
+S+GK KT + E+ K + E + + +++KP EPPKDY+HVR
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVR 205
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVE
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 209 FLSMKLEAVN 218
FLSMKL VN
Sbjct: 266 FLSMKLATVN 275
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 11/130 (8%)
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSA-----------AGNKPAESSKPSEPPKDYIHVR 148
+S+GK KT + E+ K + E + + +++KP EPPKDY+HVR
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGSGGGQKQGKGKNAKPVEPPKDYVHVR 205
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVE
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 209 FLSMKLEAVN 218
FLSMKL VN
Sbjct: 266 FLSMKLATVN 275
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 11/130 (8%)
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSA-----------AGNKPAESSKPSEPPKDYIHVR 148
+S+GK KT + E+ K + E + + +++KP EPPKDY+HVR
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVR 205
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVE
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 209 FLSMKLEAVN 218
FLSMKL VN
Sbjct: 266 FLSMKLATVN 275
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Query: 134 SSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
SSKP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIINY+QSLQ+QVEFLSMKL VN +++
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 81/86 (94%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
+++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK LQDLVPGCNKVIGKAL+
Sbjct: 176 KNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALM 235
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVN 218
LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 236 LDEIINYVQSLQRQVEFLSMKLATVN 261
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 120/198 (60%), Gaps = 26/198 (13%)
Query: 26 PFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDES 85
PFPINN +M + SS+ + +S G RKR+ S ++ S
Sbjct: 163 PFPINNEQPVATNEKMPRI------SSSPVLKPLVSHVPAGESSGEYSRKRKAKSKQN-S 215
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI 145
VS + + DS+ K K S +NG K +K +P KDYI
Sbjct: 216 PSTVSPSKEIEEKEDSDPKRCKKS---EDNGDK----------------TKSIDPYKDYI 256
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQR
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 206 QVEFLSMKLEAVNSRMNL 223
QVEFLSMKL +VN+R++
Sbjct: 317 QVEFLSMKLSSVNTRLDF 334
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 108/150 (72%), Gaps = 8/150 (5%)
Query: 81 SEDESSKIVSTTSS-------ANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAE 133
SE+E SK+VST+ + D D K +K +N + E E +S +K A+
Sbjct: 49 SEEEPSKLVSTSGTAASSSAGCQDSADPEAKRLKQIAPSEKNDRRTEAETNSGNASKSAD 108
Query: 134 SSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
+ P DYIHVRARRGQATDSHSLAERARREKISERMK+LQD+VPGCNKVIGKA V
Sbjct: 109 KKPAPKEPPKDYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASV 168
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
LDEIINYIQSLQRQVEFLSMKLEA+N+ ++
Sbjct: 169 LDEIINYIQSLQRQVEFLSMKLEAINAHVS 198
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 100/141 (70%), Gaps = 13/141 (9%)
Query: 91 TTSSANDLNDSNGKWMKTSGSKNENGS----KAEVEASSAAGNKPAESSKPS-------- 138
++ A + D + K KT G + + GS K E S ++ ++ KP
Sbjct: 124 SSVQAGEQKDPDTKRCKTEGGEGKEGSPVKPKPEQAGSDSSVEDGGQTQKPPGKGKNAKL 183
Query: 139 -EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEII
Sbjct: 184 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 243
Query: 198 NYIQSLQRQVEFLSMKLEAVN 218
NY+QSLQRQVEFLSMKL VN
Sbjct: 244 NYVQSLQRQVEFLSMKLATVN 264
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 129/198 (65%), Gaps = 23/198 (11%)
Query: 56 DGSMEESTVTEQSGG-GCGR------KRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKT 108
DGS ES E SGG G G ++LS++ ++ + +L+ +NG +T
Sbjct: 263 DGSANESDEAECSGGDGLGEPCTLEATGKELSTKGLGTRKRKRSGQKTELDQANGPLQQT 322
Query: 109 SGSKNENGSKAEVE----------ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDS 157
+ S ++ AE + A+ G ++S+PS+PPK+ YIHVRARRGQAT+S
Sbjct: 323 TVSPKDD---AETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNS 379
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAER RREKISERMK LQ+LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL V
Sbjct: 380 HSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 439
Query: 218 NSRMNLTPTIEGFHPKDV 235
N R+++ I+G KD+
Sbjct: 440 NPRLDI--NIDGVVAKDI 455
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 122/187 (65%), Gaps = 21/187 (11%)
Query: 56 DGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNG-KWMKTSGSKN- 113
D M E T E S G K+R S +D D + +NG + + + G+++
Sbjct: 135 DSPMLEGTSGEPSSKGLNTKKRKRSGQD------------GDNDKANGAQELPSEGAEDN 182
Query: 114 -ENGSKAEVEASS---AAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREK 168
EN K + + +S A+G S+ S+PPK+ YIHVRARRGQAT+SHSLAER RREK
Sbjct: 183 YENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREK 242
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 228
ISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE
Sbjct: 243 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIE 300
Query: 229 GFHPKDV 235
G KD+
Sbjct: 301 GLLAKDI 307
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 126/202 (62%), Gaps = 34/202 (16%)
Query: 45 GHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGK 104
G G GE L E+T E S G G ++R S + +L+ +NG
Sbjct: 233 GDGLGEPCTL------EATGKELSTKGLGTRKRKRSGQ------------KTELDQANGP 274
Query: 105 WMKTSGSKNENGSKAEVE----------ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQ 153
+T+ S ++ AE + A+ G ++S+PS+PPK+ YIHVRARRGQ
Sbjct: 275 LQQTTVSPKDD---AETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQ 331
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
AT+SHSLAER RREKISERMK LQ+LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMK
Sbjct: 332 ATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 391
Query: 214 LEAVNSRMNLTPTIEGFHPKDV 235
L VN R+++ I+G KD+
Sbjct: 392 LATVNPRLDI--NIDGVVAKDI 411
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 81/86 (94%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
+++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK LQDLVPGCNKVIGKAL+
Sbjct: 171 KNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALM 230
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVN 218
LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 231 LDEIINYVQSLQRQVEFLSMKLATVN 256
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
Query: 112 KNENGSKAEVEASSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 170
K ENG E ++A K ++ SKP E PKDYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 218 KRENGRGFEENDENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKIS 277
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
ERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN+
Sbjct: 278 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNT 326
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Query: 74 RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAE 133
RK SS+ +K TT+ + + K S +E A E +G
Sbjct: 183 RKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKGKEL 242
Query: 134 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
+ +EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++L
Sbjct: 243 VAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVML 302
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
DEIINY+QSLQRQVEFLSMKL VN R+ L + F P+D
Sbjct: 303 DEIINYVQSLQRQVEFLSMKLSTVNPRLELG-ADDSFVPRD 342
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 91/104 (87%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+SKP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQRQVEFLSMKL AVN R+++ ++G K+V
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDI--NLDGLLTKEV 102
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 101/131 (77%), Gaps = 8/131 (6%)
Query: 102 NGKWMKTSGSKNENGSKAE-VEASSAAGNKPAE------SSKPS-EPPKDYIHVRARRGQ 153
+GK + GS + K E V AS A+ A+ ++KP+ EPPKDY+HVRARRGQ
Sbjct: 104 DGKRCRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQ 163
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
ATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMK
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMK 223
Query: 214 LEAVNSRMNLT 224
L VN +++ +
Sbjct: 224 LATVNPQLDFS 234
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 101/131 (77%), Gaps = 8/131 (6%)
Query: 102 NGKWMKTSGSKNENGSKAE-VEASSAAGNKPAE------SSKPS-EPPKDYIHVRARRGQ 153
+GK + GS + K E V AS A+ A+ ++KP+ EPPKDY+HVRARRGQ
Sbjct: 104 DGKRCRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQ 163
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
ATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMK
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMK 223
Query: 214 LEAVNSRMNLT 224
L VN +++ +
Sbjct: 224 LATVNPQLDFS 234
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 101/131 (77%), Gaps = 8/131 (6%)
Query: 102 NGKWMKTSGSKNENGSKAE-VEASSAAGNKPAE------SSKPS-EPPKDYIHVRARRGQ 153
+GK + GS + K E V AS A+ A+ ++KP+ EPPKDY+HVRARRGQ
Sbjct: 104 DGKRCRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQ 163
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
ATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMK
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMK 223
Query: 214 LEAVNSRMNLT 224
L VN +++ +
Sbjct: 224 LATVNPQLDFS 234
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 101/131 (77%), Gaps = 8/131 (6%)
Query: 102 NGKWMKTSGSKNENGSKAE-VEASSAAGNKPAE------SSKPS-EPPKDYIHVRARRGQ 153
+GK + GS + K E V AS A+ A+ ++KP+ EPPKDY+HVRARRGQ
Sbjct: 104 DGKRCRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQ 163
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
ATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMK
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMK 223
Query: 214 LEAVNSRMNLT 224
L VN +++ +
Sbjct: 224 LATVNPQLDFS 234
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S A VE + K S EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK L
Sbjct: 126 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 185
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVS 236
QDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN ++ + H KDVS
Sbjct: 186 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLH-KDVS 244
Query: 237 LS 238
L+
Sbjct: 245 LT 246
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S A VE + K S EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK L
Sbjct: 128 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 187
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVS 236
QDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN ++ + H KDVS
Sbjct: 188 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLH-KDVS 246
Query: 237 LS 238
L+
Sbjct: 247 LT 248
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 120/188 (63%), Gaps = 22/188 (11%)
Query: 56 DGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNG-KWMKTSGSK-- 112
D M E T E S G K+R S D D + +NG + + + G+K
Sbjct: 271 DSPMLEGTSGEPSSKGLNSKKRKRSGRD------------GDNDKANGAQELPSEGAKGN 318
Query: 113 NENGSKAEVE----ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARRE 167
+EN K + + A+ A G S+ S+PPK+ YIHVRARRGQAT+SHSLAER RRE
Sbjct: 319 SENQQKGDQQPISTANKACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRRE 378
Query: 168 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTI 227
KISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ I
Sbjct: 379 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NI 436
Query: 228 EGFHPKDV 235
EG KD+
Sbjct: 437 EGLLAKDI 444
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 119/183 (65%), Gaps = 12/183 (6%)
Query: 60 EESTVTEQSGG------GCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKN 113
EE ++ E +GG G G K+R S +D +I S +++ + +
Sbjct: 318 EEPSILEGTGGEPSSGKGLGSKKRKRSGQD--PEIDQVKGSPQQPGEASKDNPEIQHKGD 375
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
+N S + + G + A++S P P ++YIHVRARRGQAT+SHSLAER RREKISERM
Sbjct: 376 QNPSSVPSKNTGKHGKQGAQASDP--PKEEYIHVRARRGQATNSHSLAERVRREKISERM 433
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPK 233
K LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG K
Sbjct: 434 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGMLGK 491
Query: 234 DVS 236
DVS
Sbjct: 492 DVS 494
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 83/95 (87%)
Query: 125 SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
SA + +SKP E PKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCN
Sbjct: 194 SAEERQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 253
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
KV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN+
Sbjct: 254 KVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNT 288
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 116/177 (65%), Gaps = 17/177 (9%)
Query: 65 TEQSGGGCG------RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSK 118
+E +GG C +KRR S + ++ S+ +A+ N+S S K E S
Sbjct: 162 SEAAGGDCSSKGSDSKKRRRPSEVMGADQVQSSNVAADSANES-----VHSKDKGEESSP 216
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
A + G ESS+ +DYIHVRARRGQAT+SHSLAER RREKISERMK+LQD
Sbjct: 217 ATTTTGKSKGKGAKESSEK----EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQD 272
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 273 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 327
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 117/192 (60%), Gaps = 18/192 (9%)
Query: 48 FGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMK 107
F S + S+ E E S G K+R S ED +L+ + G
Sbjct: 278 FSGGSGQDEPSLLEGNCGELSAKSLGSKKRKRSGEDA------------ELDQAKGTPQS 325
Query: 108 TSGS---KNENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAER 163
GS + + K S A+G + + S+ S+ PK+ YIHVRARRGQAT+SHSLAER
Sbjct: 326 AKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAER 385
Query: 164 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++
Sbjct: 386 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 445
Query: 224 TPTIEGFHPKDV 235
IEG KD+
Sbjct: 446 --NIEGLLAKDI 455
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 119/188 (63%), Gaps = 20/188 (10%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G++ E T QS GG G+K R+ SS + K S A + S ++ + NG
Sbjct: 212 GNVSEDT---QSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRS----QQSEEEPDNNG 264
Query: 117 SKAEVEASSAAGNKPAESS--------KPSEPPKD-YIHVRARRGQATDSHSLAERARRE 167
+ + S N P + S + S+PPKD YIHVRARRGQAT+SHSLAER RRE
Sbjct: 265 DEKRNDEQSP--NSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRRE 322
Query: 168 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTI 227
KISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN +M+ +
Sbjct: 323 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDF--NL 380
Query: 228 EGFHPKDV 235
EG KD
Sbjct: 381 EGLLAKDA 388
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 114/173 (65%), Gaps = 7/173 (4%)
Query: 65 TEQSGGGCGRKRRDLSSEDESSKIVS--TTSSANDLNDSNGKWMKTSGSKNENGSKAEVE 122
+E +GG C K D S+++ S+N DS + ++ SK++ +
Sbjct: 160 SEAAGGDCSSKGSDSKKRRRPSEVMGGDQVQSSNVAADSANESVQ---SKDKGEESSPAT 216
Query: 123 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
++ G + +K +DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPG
Sbjct: 217 GTTTGGRSKGKGAKEGSEKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPG 276
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
C+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 277 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 327
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Query: 68 SGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA 127
S G C RKR+ + ++ +V+ + + ++ K K S + + + A A
Sbjct: 161 SDGPC-RKRKASGGKSKAKVVVTPAAPKSRAPETRAKKCKLSTDVGHDDEEQKPAAGEAW 219
Query: 128 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+ +EP KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV
Sbjct: 220 HDNSNGKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVT 279
Query: 188 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ L ++ PKD
Sbjct: 280 GKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLKL--DVDSCIPKD 324
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 91/110 (82%), Gaps = 3/110 (2%)
Query: 127 AGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 185
+G + + S+ S+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+K
Sbjct: 350 SGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 409
Query: 186 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
V GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG KD+
Sbjct: 410 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGLLAKDI 457
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 120/183 (65%), Gaps = 9/183 (4%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSK---IVSTTSSANDLNDSNGKWMKTSGSKN 113
G++ E T QS GG GRK R+ SS + K V++ ++ + + + + +G K
Sbjct: 212 GNVSEDT---QSSGGNGRKGRETSSNTKKRKRNGQVNSEAAQSHRSQQSEEEPDNNGDKK 268
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 172
N ++ + + + + S+ PKD YIHVRARRGQAT+SHSLAER RREKISER
Sbjct: 269 RNSEQSPNSPGNKTNSGKRQGKQSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISER 328
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
MK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN +M+ +EG
Sbjct: 329 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLA 386
Query: 233 KDV 235
KD
Sbjct: 387 KDA 389
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLT 224
Y+QSLQ+QVEFLSMKL VN ++ +
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSH 158
D K +K N + E ++S +K A+ + P DYIHVRARRGQATDSH
Sbjct: 2 DPEAKRLKQMTPSENNDRRTEAGSNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSH 61
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
SLAERARREKISERMK+LQD+VPGCNKVIGKA VLDEIINYIQSLQRQVEFLSMKLE +N
Sbjct: 62 SLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLETIN 121
Query: 219 SRMN 222
+ MN
Sbjct: 122 AHMN 125
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/101 (79%), Positives = 86/101 (85%), Gaps = 3/101 (2%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
SK SE P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +LD
Sbjct: 174 SKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLD 232
Query: 195 EIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
EIINY+QSLQRQVEFLSMKL AVN R++L +I+ KDV
Sbjct: 233 EIINYVQSLQRQVEFLSMKLAAVNPRLDL--SIDDLFDKDV 271
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLT 224
Y+QSLQ+QVEFLSMKL VN ++ +
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 138 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 197 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKDA 389
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 6/162 (3%)
Query: 63 TVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVE 122
T+TE S G K+R ++ V + NG + + G +N + +
Sbjct: 261 TMTEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQNPSST----- 315
Query: 123 ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
S AG + + S+PS+ PK+ YIHVRARRGQAT+SHSLAER RREKISERM++LQDLVP
Sbjct: 316 TSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVP 375
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++
Sbjct: 376 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 417
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 138 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 197 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKDA 389
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 6/162 (3%)
Query: 63 TVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVE 122
T+TE S G K+R ++ V + NG + + G +N + +
Sbjct: 261 TMTEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQNPSST----- 315
Query: 123 ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
S AG + + S+PS+ PK+ YIHVRARRGQAT+SHSLAER RREKISERM++LQDLVP
Sbjct: 316 TSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVP 375
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++
Sbjct: 376 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 417
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 113/169 (66%), Gaps = 8/169 (4%)
Query: 68 SGGGCGRKRRDLSSED-ESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSA 126
SG G G K+R S +D E ++ + + + N + ++N S + +
Sbjct: 227 SGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKG---DQNPSSVPSKNTGK 283
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
G + A++S P P ++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 284 HGKQGAQASDP--PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 341
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG KD+
Sbjct: 342 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGMLGKDI 388
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 104/144 (72%), Gaps = 10/144 (6%)
Query: 89 VSTTSSANDLNDSNGKWM--KTSGSKNENG-SKAEVEASSAAGN-------KPAESSKPS 138
ST+S A+D DS +TS + +G KAE AS +G+ K + S +
Sbjct: 5 TSTSSFASDGKDSKSMEANEQTSLKRQRSGPVKAERSASENSGDSVGPSSLKASSKSVQN 64
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P +DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIIN
Sbjct: 65 LPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 124
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMN 222
Y+QSLQRQ+EFLSMKL AVN R++
Sbjct: 125 YVQSLQRQIEFLSMKLAAVNPRLD 148
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 82/96 (85%), Gaps = 2/96 (2%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVP CNKV GKA++LDEIIN
Sbjct: 24 DPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIIN 83
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
Y+QSLQRQVEFLSMKL VN +M ++ F PKD
Sbjct: 84 YVQSLQRQVEFLSMKLSTVNPQMEF--DVDNFLPKD 117
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 125/212 (58%), Gaps = 18/212 (8%)
Query: 33 GAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSED 83
G DA L G+ G ESS D S +E + E SGG C +KR+ S+D
Sbjct: 149 GCKDA-LLTGDKQQGDTESSHGVDASSKELSKPECSGGAGQDEGPSVSCPKKRK-RPSQD 206
Query: 84 ESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKD 143
K V S L K K G K+E K + S + K E K P +D
Sbjct: 207 RGVKNVQEGS--QQLATLAAKQEKDDGDKDE--PKRPIVTSRKSNGKQTED-KSDAPKED 261
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
YIH+RAR GQAT+SHSLAER RREKISERMK LQDLVPGC+KVIGKA++LDEIINY+QSL
Sbjct: 262 YIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSL 321
Query: 204 QRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QRQVEFLSMKL AVN ++ IE KD+
Sbjct: 322 QRQVEFLSMKLSAVNPALDF--NIERILSKDL 351
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSEDESSKIVS 90
+ G G GE++ D S +E ++ ++GG C +KR+ S +D K
Sbjct: 151 QTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRKR-SGQDGGVK--- 206
Query: 91 TTSSANDLNDSNGKWMKTSGS--KNENGSKAEVEASSAAGNKPAESS---KPSEPPKDYI 145
+ G+ + T GS KNE+ K E E SS A K + P +DYI
Sbjct: 207 --------HAEGGEQLATVGSAQKNEDDEKGEPERSSVASGKSSGKQIKDNAGSPKEDYI 258
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQR
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN ++ IE KD+
Sbjct: 319 QVEFLSMKLASVNPTLDF--NIERILSKDI 346
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 95/115 (82%), Gaps = 3/115 (2%)
Query: 127 AGNKPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
A K ++S +P+ EPP+DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCN
Sbjct: 46 AKGKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCN 105
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
KVIGKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ T+ KD++ ++
Sbjct: 106 KVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQLDFD-TLSNLLHKDMNQAL 159
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Query: 112 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 219 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 278
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 279 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEG 336
Query: 230 FHPKDV 235
KD+
Sbjct: 337 LLSKDL 342
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 84/97 (86%), Gaps = 2/97 (2%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P ++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIIN
Sbjct: 142 QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 201
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
Y+QSLQRQVEFLSMKL VN R++L IEG KDV
Sbjct: 202 YVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLAKDV 236
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Query: 112 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 209 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 268
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 269 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEG 326
Query: 230 FHPKDV 235
KD+
Sbjct: 327 LLSKDL 332
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVST--TSSANDLNDSNGKWMKTSGSKNENGS 117
+E +E +GG C K D ++++ T S+N +DS + + S K E S
Sbjct: 162 DEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESVH-SKDKGEESS 220
Query: 118 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
A + G E+S+ + ++YIHVRARRGQAT+SHSLAER RREKISERMK+LQ
Sbjct: 221 PATTNGGKSKGKGAKETSESQK--EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQ 278
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 279 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 334
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 92/119 (77%), Gaps = 7/119 (5%)
Query: 118 KAEVEASSAAGNK--PAESSKPSEPPKD-----YIHVRARRGQATDSHSLAERARREKIS 170
KAE AS +G+ P S+PP+D YIHVRARRGQATDSHSLAER RREKIS
Sbjct: 33 KAERSASENSGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKIS 92
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
ERMK LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ+EFLSMKL AVN R++ + + G
Sbjct: 93 ERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYDLLG 151
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
Query: 132 AESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
A++SK SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 240 ADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 299
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQRQVEFLSMKL AVN R++ I+ F K+V
Sbjct: 300 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDNFLAKEV 342
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
Query: 132 AESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
A++SK SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 129 ADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 188
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQRQVEFLSMKL AVN R++ I+ F K+V
Sbjct: 189 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDNFLAKEV 231
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 80/86 (93%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPP+DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCNKVIGKAL+LDEIIN
Sbjct: 169 EPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIIN 228
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLT 224
Y+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 229 YVQSLQQQVEFLSMKLATVNPQLDFS 254
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 103/161 (63%), Gaps = 15/161 (9%)
Query: 63 TVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVE 122
TV E KR SSE E SK D NG ++ + N ++
Sbjct: 180 TVEEDENNNSKEKRIKTSSEGELSKTT----------DQNGTKNNSTITTTTNNNRETSA 229
Query: 123 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
+S +K +E KP DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPG
Sbjct: 230 DTSKENSKASEVQKP-----DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPG 284
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
CNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 285 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 325
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 91/115 (79%), Gaps = 11/115 (9%)
Query: 110 GSKNENGS-KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
GS +EN + A+VE E KP EP KDYIHVRARRGQATDSHSLAER RR++
Sbjct: 219 GSSDENAAVPAKVEL---------EEEKP-EPVKDYIHVRARRGQATDSHSLAERVRRKR 268
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
ISERMK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL +N +++L
Sbjct: 269 ISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDL 323
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSEDESSKIVS 90
+ G G GE++ D S +E ++ ++GG C +KR+ S +D K
Sbjct: 151 QTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRKR-SGQDGGVK--- 206
Query: 91 TTSSANDLNDSNGKWMKTSGS--KNENGSKAEVEASSAAGNKPAESS---KPSEPPKDYI 145
+ G+ + T GS KNE+ K E + SS A K + P +DYI
Sbjct: 207 --------HAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYI 258
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQR
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN ++ IE KD+
Sbjct: 319 QVEFLSMKLASVNPTLDF--NIERILSKDI 346
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVST--TSSANDLNDSNGKWMKTSGSKNENGS 117
+E +E +GG C K D ++++ T S+N +DS + + S K E S
Sbjct: 543 DEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESVH-SKDKGEESS 601
Query: 118 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
A + G E+S+ + ++YIHVRARRGQAT+SHSLAER RREKISERMK+LQ
Sbjct: 602 PATTNGGKSKGKGAKETSESQK--EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQ 659
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 660 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 715
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 124/210 (59%), Gaps = 28/210 (13%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSEDESSKIVS 90
+ G G GE++ D S +E ++ +GG C +KR+ S +D K
Sbjct: 149 QTGEKQQGDGETTHAVDSSSKELSMLGCNGGAGHDEEIRVSCSKKRKR-SGQDGGVK--- 204
Query: 91 TTSSANDLNDSNGKWMKTSGS--KNENGSKAEVEASSAAGNKPA---ESSKPSEPPKDYI 145
+ G+ + T GS KNEN E + SS A K + P +DYI
Sbjct: 205 --------HAEGGEQLATVGSAKKNENDDNGEPKRSSVASRKSSGKQTKDNAGSPKEDYI 256
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQR
Sbjct: 257 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 316
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN ++ IE KD+
Sbjct: 317 QVEFLSMKLASVNPTLDF--NIERILSKDI 344
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 251 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 310
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
SLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 311 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 342
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 86/112 (76%), Gaps = 16/112 (14%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------- 185
EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 137 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 196
Query: 186 -VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVS 236
V GKA++LDEIINY+QSLQRQVEFLSMKL VN +++ ++ F PKD S
Sbjct: 197 LVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDF--DVDNFIPKDAS 246
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 103/161 (63%), Gaps = 15/161 (9%)
Query: 63 TVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVE 122
TV E KR SSE E SK D NG ++ + N ++
Sbjct: 180 TVEEDENNNSKEKRIKTSSEGELSKTT----------DQNGTKNNSTITTTTNNNRETSA 229
Query: 123 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
+S +K +E KP DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPG
Sbjct: 230 DTSKENSKASEVQKP-----DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPG 284
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
CNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 285 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 325
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 248 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 307
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
SLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 308 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 339
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 105/151 (69%), Gaps = 17/151 (11%)
Query: 75 KRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNEN--GSKAEVEASSAAGNKPA 132
KR S E+ SK+ TS+ N K++ +KN N + AE ++ G++
Sbjct: 152 KRVKASGEEGESKVTEQTSNKNG---------KSNANKNNNRETTSAETSKDNSKGSE-V 201
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
++ KP +YIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +
Sbjct: 202 QNQKP-----EYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGM 256
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 257 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 287
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 124/207 (59%), Gaps = 22/207 (10%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLN 99
+ G G GE++ D S +E ++ ++GG + DE +++ +
Sbjct: 208 QTGEKQQGDGETTHAVDSSSKELSMPGRNGG---------AGHDEGTRVSCSKKRKRSGQ 258
Query: 100 DSN------GKWMKTSGS--KNENGSKAEVEASSAAGNKPAESS---KPSEPPKDYIHVR 148
D G+ + T GS KNE+ K E + SS A K + P +DYIHVR
Sbjct: 259 DGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVR 318
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVE
Sbjct: 319 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 378
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHPKDV 235
FLSMKL +VN ++ IE KD+
Sbjct: 379 FLSMKLASVNPTLDF--NIERILSKDI 403
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EP KDYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEIIN
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 132
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNL 223
Y+QSLQRQVEFLSMKL +N +++
Sbjct: 133 YVQSLQRQVEFLSMKLATMNPQLDF 157
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 119/190 (62%), Gaps = 12/190 (6%)
Query: 49 GESSALRDGS-MEESTVTEQSGGGCGRKRRDLSSED-ESSKIVSTTSSANDLNDSNGKWM 106
G+ S+ DGS M + E S G K+R + +D +S K T ++ N +
Sbjct: 211 GDESSGDDGSQMLDCASGEPSIKGLNPKKRKRNGQDGDSDKATGTLELPSETAKDNCESR 270
Query: 107 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERAR 165
K G + + A+G + S+ S+PP + Y+HVRARRGQAT+SHSLAER R
Sbjct: 271 K-------KGKQQTSSTAKASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVR 323
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 225
REKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQ+QVEFLSMKL VN ++
Sbjct: 324 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDF-- 381
Query: 226 TIEGFHPKDV 235
+E PKD+
Sbjct: 382 NMERLLPKDI 391
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 126/210 (60%), Gaps = 28/210 (13%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSEDESSKIVS 90
+ G G GE++ D S +E ++ ++GG C +KR+ S +D K
Sbjct: 259 QTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRKR-SGQDGGVK--- 314
Query: 91 TTSSANDLNDSNGKWMKTSGS--KNENGSKAEVEASSAAGNKPAESS---KPSEPPKDYI 145
+ G+ + T GS KNE+ K E + SS A K + P +DYI
Sbjct: 315 --------HAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYI 366
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQR
Sbjct: 367 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 426
Query: 206 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QVEFLSMKL +VN ++ IE KD+
Sbjct: 427 QVEFLSMKLASVNPTLDF--NIERILSKDI 454
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 98/133 (73%), Gaps = 11/133 (8%)
Query: 109 SGSKNENGSKAEVEASSAAGNKPAESSKPS------EPPKDYIHVRARRGQATDSHSLAE 162
+ KNEN K E + SS A P +SS+ P ++YIHVRARRGQAT+SHSLAE
Sbjct: 212 AAQKNENDEKYEPKRSSVA---PGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAE 268
Query: 163 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
R RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 269 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLD 328
Query: 223 LTPTIEGFHPKDV 235
L IE KD+
Sbjct: 329 L--NIESILSKDI 339
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 115/193 (59%), Gaps = 34/193 (17%)
Query: 42 GNMGHGFGESSALRDGSMEESTVT----EQSGGGCGRKRRDLSSEDESSKIVSTTSSAND 97
G G ++ + DGS+E S+ Q GRKR+ +++D S+ T SSA+
Sbjct: 40 GQEGAANASAAMVEDGSLESSSAVLDTYPQGSASVGRKRKASTADDSSA----TLSSAHS 95
Query: 98 LNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDS 157
+ +GK S G + S+ E PK YIHVRARRGQATDS
Sbjct: 96 KDCKDGK--------------------SRRGKREKSSTDQEEAPKGYIHVRARRGQATDS 135
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 136 HSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS- 194
Query: 218 NSRMNLTPTIEGF 230
++P + GF
Sbjct: 195 -----MSPVLYGF 202
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 117/178 (65%), Gaps = 7/178 (3%)
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVST--TSSANDLNDSNGKWMKTSGSKNENGS 117
+E +E +GG C K D ++++ T S+N +DS + + S K E S
Sbjct: 162 DEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESVH-SKDKGEESS 220
Query: 118 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
A + G E+ + + ++YIHVRARRGQAT+SHSLAER RREKISERMK+LQ
Sbjct: 221 PATTNGGKSKGKGAKETYESQK--EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQ 278
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
DLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KD+
Sbjct: 279 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 334
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 92/130 (70%)
Query: 89 VSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVR 148
+ +SS N + + +K+ K N + A+ E + +E EPPKDYIHVR
Sbjct: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVR 184
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVE
Sbjct: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
Query: 209 FLSMKLEAVN 218
FLSMKL +VN
Sbjct: 245 FLSMKLASVN 254
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EP KDYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEIIN
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 162
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNL 223
Y+QSLQRQVEFLSMKL +N +++
Sbjct: 163 YVQSLQRQVEFLSMKLATMNPQLDF 187
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
++SK SE P DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCNKV GKA +
Sbjct: 181 QNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGM 239
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LDEIINY+QSLQRQVEFLSMKL AVN R++ +++ KDV
Sbjct: 240 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--SMDDLFDKDV 280
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 112 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 220 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 279
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG
Sbjct: 280 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD---NIEG 336
Query: 230 FHPKDV 235
KD+
Sbjct: 337 LLSKDL 342
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 107/168 (63%), Gaps = 7/168 (4%)
Query: 51 SSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSG 110
SS + S + STV ++ G + + L+ D+ K ++ + D D GK K
Sbjct: 83 SSVTKKQSTDSSTVVDKFESG-EQVTQKLAPMDKKRKSSFNSAQSKDARDGRGKKQKKCN 141
Query: 111 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 170
++ + K + E K + EPP YIHVRARRGQATDSHSLAER RREKIS
Sbjct: 142 NEVKEDKKPKAE------KKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKIS 195
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
ERMKILQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 196 ERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 243
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 92/129 (71%), Gaps = 12/129 (9%)
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGN-----------KPAESSKPSEPPK-DYIHVRA 149
N +K S E+ + E +SA+ N K A S +P + PK DYIHVRA
Sbjct: 7 NSAPLKRHKSDGEDVRAVKAEQASASENSGDSISPRSTLKGATSKRPQDFPKQDYIHVRA 66
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEF
Sbjct: 67 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 126
Query: 210 LSMKLEAVN 218
LSMKL VN
Sbjct: 127 LSMKLATVN 135
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 9 SSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGS----MEESTV 64
++FS +SL + FP + G N H S + D S ++E V
Sbjct: 2 ATFSYFQNYPHSLLDPLLFPTPHPSINLTGFIDQNHLHPLPNISTVEDISFNPFLDEYNV 61
Query: 65 TEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWM-KTSGSKNENGSKAEVEA 123
G L + ++K +T SS+ D S + K G K N S ++
Sbjct: 62 DRPENSG-------LEKQANTTKTATTRSSSCDHGSSAITTIGKKRGRKARNVSNSKEGV 114
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
K SK EPPKDYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC
Sbjct: 115 EGTKSKKQKRGSK-EEPPKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGC 173
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL ++
Sbjct: 174 DKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSI 207
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 87/111 (78%), Gaps = 4/111 (3%)
Query: 112 KNENGSKAEVEASSAAGN---KPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARRE 167
K E GS +E S + K A S P + PK DYIHVRARRGQATDSHSLAER RRE
Sbjct: 37 KTEQGSASENSGDSISPRSTLKGATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRRE 96
Query: 168 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
KISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ+EFLSMKL AVN
Sbjct: 97 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVN 147
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 122/198 (61%), Gaps = 10/198 (5%)
Query: 32 GGAGDAGLRMG--NMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIV 89
GG D+ L N+ +GE++ D + S T G +++ D ++D + K
Sbjct: 49 GGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTETKDCNEKKK 108
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA-----GNKPAESSKPSEPPK-- 142
T + +DL + G+ K+ ++ NGS ++ N +SSK ++ +
Sbjct: 109 KMTMNRDDLVEE-GEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKT 167
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 203 LQRQVEFLSMKLEAVNSR 220
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 76/86 (88%)
Query: 138 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
SEP KDYIHVRARRGQATDSHSLAER RREKI ERMK+LQ LVP CNK+ GKAL+LDEII
Sbjct: 249 SEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEII 308
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNL 223
NY+QSLQRQVEFLSMKL +N ++ L
Sbjct: 309 NYVQSLQRQVEFLSMKLSTMNPQLEL 334
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 122/198 (61%), Gaps = 10/198 (5%)
Query: 32 GGAGDAGLRMG--NMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIV 89
GG D+ L N+ +GE++ D + S T G +++ D ++D + K
Sbjct: 49 GGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTETKDCNEKKK 108
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA-----GNKPAESSKPSEPPK-- 142
T + +DL + G+ K+ ++ NGS ++ N +SSK ++ +
Sbjct: 109 KVTMNRDDLVEE-GEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKT 167
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 203 LQRQVEFLSMKLEAVNSR 220
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 123/213 (57%), Gaps = 34/213 (15%)
Query: 40 RMGNMGHGFGESSALRDGSMEESTVTEQSGGG---------CGRKRRDLSSED-----ES 85
+ G G GE++ D S +E ++ ++GG C +KR+ +D E
Sbjct: 150 QTGEKQQGDGETTCDVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRKRSGQDDGVKHAEG 209
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPA---ESSKPSEPPK 142
+ ++T SA KNEN K + + SS A K + P +
Sbjct: 210 DEQLATVGSAQ---------------KNENDEKGKPKRSSVASGKSSGKQTKDNAGSPKE 254
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
+YIHVRARRGQAT+SHSLAER RREKISERMK LQ+LVPGC KV GKA++LDEIINY+QS
Sbjct: 255 EYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQS 314
Query: 203 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQRQVEFLSMKL +VN ++ IE KD+
Sbjct: 315 LQRQVEFLSMKLASVNPTLDF--NIERILSKDI 345
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 122/198 (61%), Gaps = 10/198 (5%)
Query: 32 GGAGDAGLRMG--NMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIV 89
GG D+ L N+ +GE++ D + S T G +++ D ++D + K
Sbjct: 49 GGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTETKDCNEKKK 108
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA-----GNKPAESSKPSEPPK-- 142
T + +DL + G+ K+ ++ NGS ++ N +SSK ++ +
Sbjct: 109 KMTMNRDDLVEE-GEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKT 167
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 203 LQRQVEFLSMKLEAVNSR 220
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 32 GGAGDAGLRMG--NMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIV 89
GG D+ L N+ +GE++ D + S T G +++ D ++D + K
Sbjct: 49 GGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTFGTGNFKKRKFDTETKDCNEKKK 108
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA-----GNKPAESSKPSEP--PK 142
T + +DL + G+ K+ ++ NGS ++ N +SSK ++
Sbjct: 109 KMTMNRDDLVEE-GEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKT 167
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 203 LQRQVEFLSMKLEAVNSR 220
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 99/137 (72%), Gaps = 6/137 (4%)
Query: 93 SSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKP---SEPPK--DYIHV 147
+SAN +S K K SK E+ S E +A G +++ K S+ PK DYIHV
Sbjct: 74 ASANSFENSTEK-RKAPKSKQESRSSGAEEEGTARGGATSKNKKKASGSDAPKETDYIHV 132
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RARRGQATDSHSLAER RRE+ISERMK LQ+LVPGC+K++GKA LDEIINY+QSLQRQV
Sbjct: 133 RARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQV 192
Query: 208 EFLSMKLEAVNSRMNLT 224
EFLSMKL A RM+L+
Sbjct: 193 EFLSMKLAAAEPRMHLS 209
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 71 EDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 130
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
SLQRQVEFLSMKL AVN ++ IEG KD+
Sbjct: 131 SLQRQVEFLSMKLAAVNPTLDF--NIEGLLSKDL 162
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 10/160 (6%)
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSK 118
M+ S+VT++ G + ++S D+ K +SS + N K + +NG K
Sbjct: 75 MDASSVTDKIESGINNNKANVSPLDKKRKSSEGSSSMTSAHSKNEK-------QGDNGKK 127
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
++ + A + E E P YIHVRARRGQATDSHSLAER RREKISERMKILQ
Sbjct: 128 KKINSKLVAKD---EKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQS 184
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL ++N
Sbjct: 185 LVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLN 224
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Query: 112 KNENGSKAEVEASSAAGNKPA---ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
KNEN K E + SS A K + P ++YIHVRARRGQAT+SHSLAER RREK
Sbjct: 211 KNENDEKDEPKRSSVASGKSSGKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREK 270
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
ISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 271 ISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF 325
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 2/98 (2%)
Query: 127 AGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 185
AGN ++SK +E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK
Sbjct: 217 AGNS-KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 275
Query: 186 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 276 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 313
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%)
Query: 137 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
P EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 197 INYIQSLQRQVEFLSMKLEAVN 218
INY+QSLQ QVEFLSMKL +VN
Sbjct: 214 INYVQSLQNQVEFLSMKLASVN 235
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 81/100 (81%), Gaps = 5/100 (5%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
+S +K E KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 216 TSKDNSKVTEVQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 270
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
NK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 271 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 310
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 104/161 (64%), Gaps = 19/161 (11%)
Query: 75 KRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAES 134
KR +S E+ SKI + N K +K + ++ GSK + S +KP
Sbjct: 88 KRIKVSVEEGESKITEQIKG-----NKNTK-LKNRENCDDVGSKENSKGSEIQNHKP--- 138
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LD
Sbjct: 139 --------DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLD 190
Query: 195 EIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
EIINY+QSLQRQVEFLSMKL AVN R++ I+ K+V
Sbjct: 191 EIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDELFAKEV 229
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/113 (69%), Positives = 87/113 (76%), Gaps = 5/113 (4%)
Query: 107 KTSGSK--NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 164
KT G K N N SK VE + K SK EPP DYIHVRARRGQATDSHSLAER
Sbjct: 97 KTRGRKARNSNNSKEGVEGRKSKKQK--RGSK-EEPPTDYIHVRARRGQATDSHSLAERV 153
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL ++
Sbjct: 154 RREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSI 206
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 9/105 (8%)
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
AEV+ SS G P E DYIHVRA+RGQAT+SHSLAER RRE+ISERMK LQD
Sbjct: 227 AEVKMSSQTGEAPKE---------DYIHVRAKRGQATNSHSLAERVRRERISERMKFLQD 277
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL V MN+
Sbjct: 278 LVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNV 322
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%)
Query: 137 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
P EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 137 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 196
Query: 197 INYIQSLQRQVEFLSMKLEAVN 218
INY+QSLQ QVEFLSMKL +VN
Sbjct: 197 INYVQSLQNQVEFLSMKLASVN 218
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 107/170 (62%), Gaps = 8/170 (4%)
Query: 49 GESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKT 108
E+S + S STV ++ G + ++++ D K +T S N + K +K+
Sbjct: 82 NETSLTKKQSTGSSTVVDKLETG-EQVTQEVTPVDRKRK--TTNGSLNSAQSKDVKEVKS 138
Query: 109 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
K G + E A K P EPP Y+HVRARRGQATDSHSLAER RREK
Sbjct: 139 KRQKKCRGDMKQEEKRPKAVKK-----VPEEPPTGYVHVRARRGQATDSHSLAERVRREK 193
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
ISERMK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 194 ISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 243
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 93/117 (79%), Gaps = 5/117 (4%)
Query: 122 EASSAAGNKPAESSKPSEP--PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E + + + +++KPS +DYIHVRARRGQATDSHSLAER RREKISERMK+LQDL
Sbjct: 95 ETAESCPKQTVDNAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 154
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE-GFHPKDV 235
VPGCNKV GKA++LDEIINY+Q+LQ QVEFLSMKL AVN +++ +E G+ +DV
Sbjct: 155 VPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDC--NVEGGYLTRDV 209
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 85/104 (81%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+SK S+ K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN R++ I+ K+V
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDF--NIDDLFEKEV 277
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 85/104 (81%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+SK S+ K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN R++ I+ K+V
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDF--NIDDLFEKEV 277
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 117/194 (60%), Gaps = 15/194 (7%)
Query: 27 FPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTE--QSGGGCGRKRRDLSSEDE 84
FP NN + + + +SS+ M+ S+VT+ +SG + + +
Sbjct: 55 FPTNNVNVNENSYCLDQNTNVTNKSSSSISLDMDSSSVTDKMESGNNKPNVTSPMDKKRK 114
Query: 85 SSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDY 144
S + S+ +SAN N + G +G KN++ SK + A E P Y
Sbjct: 115 SREGSSSMTSANSKNVTQGD----NGKKNKSNSKLVAKDEKKAN---------EEAPTGY 161
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
IHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ
Sbjct: 162 IHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQ 221
Query: 205 RQVEFLSMKLEAVN 218
QVEFLSMKL ++N
Sbjct: 222 NQVEFLSMKLASLN 235
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 85/104 (81%), Gaps = 6/104 (5%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E A ++ G++ ++ KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 171 ETSADTSKGSE-VQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+PGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 225 IPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 268
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
Query: 111 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 170
S+ E + A + AA S P ++YIHVRARRGQAT+SHSLAER RREKIS
Sbjct: 206 SRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKIS 265
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE
Sbjct: 266 ERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNI--DIERI 323
Query: 231 HPKDV 235
KD+
Sbjct: 324 LSKDI 328
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
++G K + AS + K E + P +DYIH+RAR GQAT+SHSLAER RREKISERM
Sbjct: 231 KDGPKRPISASRKSNGKQTEDNS-DAPKEDYIHIRARSGQATNSHSLAERVRREKISERM 289
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
K LQDLVPGC+KVIGKA++LDEIINY+QSLQRQVEFLSMKL VN ++
Sbjct: 290 KFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDF 339
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
++G K + AS + K E + P +DYIH+RAR GQAT+SHSLAER RREKISERM
Sbjct: 231 KDGPKRPISASRKSNGKQTEDNS-DAPKEDYIHIRARSGQATNSHSLAERVRREKISERM 289
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
K LQDLVPGC+KVIGKA++LDEIINY+QSLQRQVEFLSMKL VN ++
Sbjct: 290 KFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDF 339
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 112/182 (61%), Gaps = 12/182 (6%)
Query: 49 GESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND-LNDS-----N 102
GE S + D EE G R++R L D +S ++ D +NDS N
Sbjct: 163 GEQSQVEDSIPEEEAPGSAPSGN--RRKRGL---DHNSTFSPNKNAEGDAVNDSPGKASN 217
Query: 103 GKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLA 161
G K E + A+V + +S+ E PK+ +IHVRARRGQAT+SHSLA
Sbjct: 218 GPKEHEKRPKGEQNNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLA 277
Query: 162 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
ER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +
Sbjct: 278 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 337
Query: 222 NL 223
N
Sbjct: 338 NF 339
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 111/172 (64%), Gaps = 16/172 (9%)
Query: 62 STVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLN-DSNGKWMKTSGSK-----NEN 115
S+VTEQ R + D+S + +SSA+ L+ DS + S K N++
Sbjct: 342 SSVTEQQQASAASPARSPTGSDDSDRRKRKSSSADKLDVDSKAADVADSQPKRCKGDNDD 401
Query: 116 GSKAEVEASSAA---------GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 166
KA+ E SS+ +K SSK +DYIHVRARRGQATDSHSLAER RR
Sbjct: 402 LVKAKAERSSSENSGDSGSPRAHKENNSSK-DHAKQDYIHVRARRGQATDSHSLAERVRR 460
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
EKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVE LSMKL +VN
Sbjct: 461 EKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLSMKLASVN 512
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
Query: 133 ESSKP-SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+SKP + +DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 18 ENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAM 77
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAV 217
+LDEIINY+QSLQRQVEFLSMKL AV
Sbjct: 78 MLDEIINYVQSLQRQVEFLSMKLAAV 103
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 74/82 (90%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 202 SLQRQVEFLSMKLEAVNSRMNL 223
SLQ QVEFLSMKL V+ R L
Sbjct: 333 SLQCQVEFLSMKLSTVDPRREL 354
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 119/186 (63%), Gaps = 19/186 (10%)
Query: 49 GESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND-LNDSNGKWMK 107
GE S + D EE G R++R L D +S ++ D + DS GK
Sbjct: 168 GEQSQVEDSIPEEEAPGSAPSGN--RRKRGL---DHNSTFSPNKNAEGDAVKDSPGK--A 220
Query: 108 TSGSKNENGSKAEVEASSAAGNKPAESSKPSE----------PPKDYIHVRARRGQATDS 157
+ GSK E+ + +VE ++ A + +S K ++ P +++IHVRARRGQAT+S
Sbjct: 221 SDGSK-EHEKRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNS 279
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL V
Sbjct: 280 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 339
Query: 218 NSRMNL 223
N +N
Sbjct: 340 NPELNF 345
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 82/96 (85%), Gaps = 2/96 (2%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
P ++YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY
Sbjct: 258 PKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 317
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 318 VQSLQQQVEFLSMKLATVNPELNI--DIERLLSKDI 351
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 74/82 (90%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 202 SLQRQVEFLSMKLEAVNSRMNL 223
SLQ QVEFLSMKL V+ R L
Sbjct: 313 SLQCQVEFLSMKLSTVDPRREL 334
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
+SS +E PK+ YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 217 KSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 276
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 277 MLDEIINYVQSLQQQVEFLSMKLATVNPDVNV--DIERILSKDI 318
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 78/89 (87%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
S+ P + YIHVRARRGQATDSHSLAER RREKISERMK LQDLVP C+KV GKA++LD
Sbjct: 13 SQVMHPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLD 72
Query: 195 EIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
EIINY+QSLQRQ+EFLSMKL AV+ R+++
Sbjct: 73 EIINYVQSLQRQIEFLSMKLAAVDPRLDI 101
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEIIN
Sbjct: 163 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIIN 222
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
Y+QSLQ QVEFLSMKL +VN
Sbjct: 223 YVQSLQNQVEFLSMKLASVN 242
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
+SS +E PK+ YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 64 KSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 123
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 124 MLDEIINYVQSLQQQVEFLSMKLATVNPDVNV--DIERILSKDI 165
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 86/104 (82%), Gaps = 3/104 (2%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 33 ESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAF 92
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINYIQSLQ+QVEFLSMKL VN +N+ I+ KDV
Sbjct: 93 MLDEIINYIQSLQQQVEFLSMKLATVNPDINI--DIDRILAKDV 134
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 8/111 (7%)
Query: 122 EASSAAGNKPAESSKP--SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E+S +G K SSK E PK YIHVRARRGQATD+HSLAER RRE+ISERM++LQ L
Sbjct: 84 ESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 144 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 188
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 8/111 (7%)
Query: 122 EASSAAGNKPAESSKP--SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E+S +G K SSK E PK YIHVRARRGQATD+HSLAER RRE+ISERM++LQ L
Sbjct: 84 ESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 144 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 188
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 81/98 (82%), Gaps = 6/98 (6%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
+S+ EPPK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 109 KSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 168
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 169 LDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 200
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 116/199 (58%), Gaps = 13/199 (6%)
Query: 31 NGGAGDAGLRMG--NMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKI 88
NGG D L N+ +GE++ D M S T G +++ D ++D + K
Sbjct: 48 NGGEMDGYLATAGLNLPMIYGETTVEGDPRMSISPETTLGTGNFKKRKFDTETKDRNEK- 106
Query: 89 VSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA-----GNKPAESSKPSEP--P 141
N + + K+ ++ NGS ++ N +SSK ++
Sbjct: 107 ---KKKMNREEVTEEEEEKSKITELNNGSPKSIKKMKNKAKKEENNCSNDSSKVTKELEK 163
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+Q
Sbjct: 164 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 223
Query: 202 SLQRQVEFLSMKLEAVNSR 220
SLQRQ+EFLSMKL VN R
Sbjct: 224 SLQRQIEFLSMKLAVVNPR 242
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 128 GNKPAESSKP---SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+
Sbjct: 89 GGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCD 148
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
KV GKALVLDEIINY+QSLQ QVEFLSMK+ +L+P + GF
Sbjct: 149 KVTGKALVLDEIINYVQSLQNQVEFLSMKI------ASLSPVLYGF 188
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 172
E+ + + ++ ++ NK +PS+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 138 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 197
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++
Sbjct: 198 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF 248
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 73/80 (91%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
EPP YIHVRARRGQATDSHSLAER RRE+ISERMKILQ LVPGC+K+ GKAL+LDEIIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
Y+QSLQ QVEFLSMKL +VN
Sbjct: 226 YVQSLQNQVEFLSMKLASVN 245
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E A ++ G++ ++ KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 171 ETSADTSKGSE-VQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+PGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL AVN ++
Sbjct: 225 IPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDF 268
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 85/107 (79%), Gaps = 2/107 (1%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
++S S+ +YIHVRARRGQATDSHSLAER RREKI++RMK LQDLVP CNKV GKA++
Sbjct: 282 KNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVM 341
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLSI 239
LDEIINY+QSLQ QVEFLSMKL VN +++ I+ F K++S S
Sbjct: 342 LDEIINYVQSLQHQVEFLSMKLATVNPKLDF--NIDNFFAKEMSGSF 386
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 128 GNKPAESSKP---SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+
Sbjct: 99 GGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCD 158
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
KV GKALVLDEIINY+QSLQ QVEFLSMK+ +L+P + GF
Sbjct: 159 KVTGKALVLDEIINYVQSLQNQVEFLSMKI------ASLSPVLYGF 198
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 115/191 (60%), Gaps = 28/191 (14%)
Query: 46 HGFGESSALRDGSMEESTV---TEQSGGGC---GRKRRDLSSEDESSKIVSTTSSANDLN 99
HG G ++A S+E S+ T GGG GRK R ED +S S +S+ + +
Sbjct: 29 HGAGAATA-DSASLETSSGVLDTSPRGGGADSGGRKARTKPREDSASASFSFSSAHSKDS 87
Query: 100 DSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHS 159
S G +KN G + G E E PK YIHVRARRGQATDSHS
Sbjct: 88 SSKGS------TKNRGGKR---------GRSSKEVEDDEEEPKGYIHVRARRGQATDSHS 132
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
LAER RRE+ISERM++LQ LVPGC+KV GKALVLDEIINY+QSLQ QVEFLSMK+
Sbjct: 133 LAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKI----- 187
Query: 220 RMNLTPTIEGF 230
+L+P + GF
Sbjct: 188 -ASLSPVLYGF 197
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 139 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 198
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 199 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI 230
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ G+A +LDEIINY
Sbjct: 195 PKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINY 254
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
+QSLQRQVEFLSMKL A+N R I+ F K+V
Sbjct: 255 VQSLQRQVEFLSMKLAALNPRPEF--NIDNFSGKEVRF 290
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 72/80 (90%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
E P YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC++V GKALVLDEIIN
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
Y+QSLQ QVEFLSMKL +VN
Sbjct: 197 YVQSLQNQVEFLSMKLASVN 216
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 250
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 251 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI 282
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 172
E+ + + ++ ++ NK +PS+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 189 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF 299
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 189 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 248
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 249 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI 280
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 133 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+ K S PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ G+A
Sbjct: 22 ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAG 81
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVN 218
+LDEIINY+QSLQRQVEF+SMKL AVN
Sbjct: 82 MLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 71/81 (87%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 163 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 222
Query: 203 LQRQVEFLSMKLEAVNSRMNL 223
LQRQVEFLSMKL VN +
Sbjct: 223 LQRQVEFLSMKLATVNPALEF 243
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
Query: 122 EASSAAGNKPAESSKP--SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
E++ G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ L
Sbjct: 82 ESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 141
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 142 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 186
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 95/154 (61%), Gaps = 12/154 (7%)
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG----------NKPAESSKPSE 139
S S D + W K+ K N +E A K A+ + E
Sbjct: 113 SCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGE 172
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII+Y
Sbjct: 173 PPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISY 232
Query: 200 IQSLQRQVEFLSMKLEAVNSRM-NLTPTIEGFHP 232
+QSLQ QVEFLSMKL ++N M P I+ HP
Sbjct: 233 VQSLQNQVEFLSMKLASLNPLMYEFGPGID-MHP 265
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 114/182 (62%), Gaps = 12/182 (6%)
Query: 60 EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKA 119
EE+T+ G KRR L +E S + + D +G+ + +E K
Sbjct: 151 EETTIGALPNG----KRRRLVAESNSPFDPNKNAEGEFQKDPSGESSDIAKELDEKKQKI 206
Query: 120 EVEASS-AAGNKPAESSKPS----EPPKD-YIHVRARRGQATDSHSLAERARREKISERM 173
E S+ G + A+ +K + E PKD YIHVRARRGQAT+SHSLAER RREKISERM
Sbjct: 207 EQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERM 266
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPK 233
++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN L +E K
Sbjct: 267 RMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE--LYNDVEKIQSK 324
Query: 234 DV 235
D+
Sbjct: 325 DI 326
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA +LDEIINY
Sbjct: 183 PKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNL 223
+QSLQRQVEFLS+KL +N R +
Sbjct: 243 VQSLQRQVEFLSLKLATMNPRTDF 266
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA +LDEIINY
Sbjct: 183 PKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 200 IQSLQRQVEFLSMKLEAVNSRMNL 223
+QSLQRQVEFLS+KL +N R +
Sbjct: 243 VQSLQRQVEFLSLKLATMNPRTDF 266
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 77/82 (93%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+K+ GKA++L+EIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 202 SLQRQVEFLSMKLEAVNSRMNL 223
SLQRQ+EFLSMKL AV+ R+++
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDI 82
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 105/152 (69%), Gaps = 11/152 (7%)
Query: 82 EDESSKIVSTTSSAN-DLNDSNGKWMKT---SGSKNENGSKAEVEASSAAGNKPAESSKP 137
++E +++ ++T A N + GK +K GS ++ S ++ +SA +
Sbjct: 47 QEERTQLYNSTGDAQLSRNMNTGKCLKDGKRKGSGEDSSSLHSLDEASALLQREVSMECA 106
Query: 138 SEPP-------KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
E P +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA
Sbjct: 107 DEKPGDAGAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 166
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
++LDEIINY+QSLQRQVEFLSMKL A++ +N
Sbjct: 167 MMLDEIINYVQSLQRQVEFLSMKLSAISPELN 198
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+Q
Sbjct: 49 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQ 108
Query: 202 SLQRQVEFLSMKLEAVN 218
SLQRQVE LSMKL +VN
Sbjct: 109 SLQRQVESLSMKLASVN 125
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+L PGCNK+ GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAV 250
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 251 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI 282
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y HVRAR+GQAT++HSLAER RREKISERMK+LQDLVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 173 YSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSL 232
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVEFLSMKL AVN R++L
Sbjct: 233 QRQVEFLSMKLSAVNPRIDL 252
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 92/125 (73%), Gaps = 8/125 (6%)
Query: 108 TSGSKNENGSKAEVEASSAAGNKPA--ESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 165
T+ S N SK E++ G K E+++ E PK YIHVRARRGQATDSHSL+ER R
Sbjct: 64 TTASLNSAHSKETKESTRKRGGKKQDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVR 123
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 225
RE+ISERM++LQ LVPGC+KV GKAL+LDEIINY++SLQ QVEFLSM++ + L+P
Sbjct: 124 RERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIAS------LSP 177
Query: 226 TIEGF 230
+ GF
Sbjct: 178 VVYGF 182
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 95/154 (61%), Gaps = 12/154 (7%)
Query: 90 STTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAG----------NKPAESSKPSE 139
S S D + W K+ K N +E A K A+ + E
Sbjct: 113 SCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGE 172
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII+Y
Sbjct: 173 PPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISY 232
Query: 200 IQSLQRQVEFLSMKLEAVNSRM-NLTPTIEGFHP 232
+QSLQ QVEFLSMKL +++ M P I+ HP
Sbjct: 233 VQSLQNQVEFLSMKLASLSPLMYEFGPGID-MHP 265
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 133 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN + IE K + LS
Sbjct: 193 SLQRQVEFLSMKLATVNPELGF--DIEQIISKQMMLS 227
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEIIN++QSL
Sbjct: 198 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSL 257
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVEFLSM+L AVN R++
Sbjct: 258 QRQVEFLSMRLAAVNPRVDF 277
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 86/104 (82%), Gaps = 7/104 (6%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
AE+SK ++YIHVRA+RGQAT+SHSLAER RRE+ISERM++LQ+LVPGCNK+ GKA+
Sbjct: 224 AEASK-----ENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAV 278
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 279 MLDEIINYVQSLQQQVEFLSMKLATVNPELNV--DIERLLSKDI 320
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 172
E+ + + ++S++ NK + S+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 134 EDKMQKDEQSSNSNVNKTNSEKQASDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 193
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++ +E
Sbjct: 194 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF--NLESLLA 251
Query: 233 KD 234
KD
Sbjct: 252 KD 253
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 73/80 (91%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
YIHVRAR+GQAT+ HSLAER RREKISERMK+LQDLVPGC KV GKA++LDEIINY+QSL
Sbjct: 171 YIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSL 230
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVEFLSMKL AVN ++ L
Sbjct: 231 QRQVEFLSMKLAAVNPQLGL 250
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 105/175 (60%), Gaps = 32/175 (18%)
Query: 56 DGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNEN 115
D SME S+V + K+R ED +S LN ++ K K EN
Sbjct: 42 DASMETSSVVLDTSPQ--DKKRKPREEDTAS-----------LNSAHSKEAK------EN 82
Query: 116 GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 175
G K G K + E P+ +IHVRARRGQATDSHSLAER RRE+ISERM++
Sbjct: 83 GRKR-------GGKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRM 135
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 136 LQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 184
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Query: 110 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
G N ++A + S +ES K DYIHVRARRGQATD HSLAERARREKI
Sbjct: 155 GKSNMGNTEASSDTSKEISKGASESQK-----LDYIHVRARRGQATDRHSLAERARREKI 209
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
S++MK LQDLVPGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL +N + L
Sbjct: 210 SKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELEL 263
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 79/91 (86%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
ESS+ E Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALV
Sbjct: 163 ESSQQEEDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALV 222
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIIN++QSLQ QVEFLSM+L AVN R++
Sbjct: 223 LDEIINHVQSLQCQVEFLSMRLAAVNPRIDF 253
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 84/126 (66%), Gaps = 14/126 (11%)
Query: 112 KNENGSKAEVEASSAA------GNKPAESSKPSEPPK--------DYIHVRARRGQATDS 157
K E K E E S+ GN A S E K DYIHVRARRGQATD
Sbjct: 136 KTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDR 195
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +
Sbjct: 196 HSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVL 255
Query: 218 NSRMNL 223
N + L
Sbjct: 256 NPELEL 261
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 84/126 (66%), Gaps = 14/126 (11%)
Query: 112 KNENGSKAEVEASSAA------GNKPAESSKPSEPPK--------DYIHVRARRGQATDS 157
K E K E E S+ GN A S E K DYIHVRARRGQATD
Sbjct: 136 KTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDR 195
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +
Sbjct: 196 HSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVL 255
Query: 218 NSRMNL 223
N + L
Sbjct: 256 NPELEL 261
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 84/126 (66%), Gaps = 14/126 (11%)
Query: 112 KNENGSKAEVEASSAA------GNKPAESSKPSEPPK--------DYIHVRARRGQATDS 157
K E K E E S+ GN A S E K DYIHVRARRGQATD
Sbjct: 136 KTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDR 195
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +
Sbjct: 196 HSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVL 255
Query: 218 NSRMNL 223
N + L
Sbjct: 256 NPELEL 261
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 84/126 (66%), Gaps = 14/126 (11%)
Query: 112 KNENGSKAEVEASSAA------GNKPAESSKPSEPPK--------DYIHVRARRGQATDS 157
K E K E E S+ GN A S E K DYIHVRARRGQATD
Sbjct: 119 KTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDR 178
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +
Sbjct: 179 HSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVL 238
Query: 218 NSRMNL 223
N + L
Sbjct: 239 NPELEL 244
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
KDYIH+R+RRGQAT+SHSLAER RREKISERMK+LQDLVPGCNKV GKALVL+ IINY+Q
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
SLQ QVE LS+KL +V SR + I G HP
Sbjct: 167 SLQSQVEILSVKLTSVLSRCHFDLQING-HP 196
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 9/167 (5%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S +++S ++ N + N N NG
Sbjct: 123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPN--------QNNRNG 174
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ + E + K +SS+ +E Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 175 KRKDFEKKGKSSTKKNKSSEENEK-LPYVHVRARRGQATDSHSLAERARREKINARMKLL 233
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
Q+LVPGC+K+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 234 QELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 280
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 117/198 (59%), Gaps = 38/198 (19%)
Query: 45 GHGFGESSA-------LRDGSMEES-----TVTEQSGGGCGRKRRDLSSEDESSKIVSTT 92
GH GE++A + D S+E S T + S RKR+ ++ED ++
Sbjct: 28 GHNHGEAAAPANANAMVEDASLESSSAVVDTSPQDSASPMERKRK--ATEDSAT------ 79
Query: 93 SSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRG 152
L+ + K K SK++ G + E +S+ E K YIHVRARRG
Sbjct: 80 -----LSSAQSKDCKQQESKSKRGKRPNKETEE-------KSTTEDEATKGYIHVRARRG 127
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
QATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM
Sbjct: 128 QATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 187
Query: 213 KLEAVNSRMNLTPTIEGF 230
++ + ++P + GF
Sbjct: 188 RIAS------MSPVLYGF 199
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 9/167 (5%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S +++S ++ N + N N NG
Sbjct: 123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPN--------QNNRNG 174
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ + E + K +SS+ +E Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 175 KRKDFEKKGKSSTKKNKSSEENEK-LPYVHVRARRGQATDSHSLAERARREKINARMKLL 233
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
Q+LVPGC+K+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 234 QELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 280
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Query: 134 SSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
S K SE K DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +
Sbjct: 171 SKKASEIQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGM 230
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 231 LDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 92/145 (63%)
Query: 74 RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAE 133
RK SS+ +K TT+ + + K S +E A E +G
Sbjct: 183 RKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKGKEL 242
Query: 134 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
+ +EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++L
Sbjct: 243 VAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVML 302
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVN 218
DEIINY+QSLQRQVE + L +
Sbjct: 303 DEIINYVQSLQRQVEVRRVCLLCIG 327
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTI--EGFHP 232
SLQRQ+EFLSMKL A+ +N + E HP
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLDLQDEQDHP 185
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTI--EGFHP 232
SLQRQ+EFLSMKL A+ +N + E HP
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDEQDHP 211
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 106/164 (64%), Gaps = 20/164 (12%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPA 132
G R+DLS E + A +L++ K + G N G +A +A
Sbjct: 105 GELRKDLSGE--------SCDIAKELDEKTQKTEQNPGP-NLRGKQAAKQAK-------- 147
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
+ ++ E PK+ Y HVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 148 DDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAV 207
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQ+QVEFLSMKL VN + + +E KD+
Sbjct: 208 MLDEIINYVQSLQQQVEFLSMKLATVNPELQI--DVERILSKDI 249
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 202 SLQRQVEFLSMKLEAVNSRMN 222
SLQRQ+EFLSMKL A+ +N
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLN 199
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 86/144 (59%), Gaps = 48/144 (33%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 166
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 167 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 212
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 330 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 389
Query: 213 KLEAVNSRMNLTPTIEGFHPKDVS 236
KL VN +++ ++ F PKD S
Sbjct: 390 KLSTVNPQLDF--DVDNFIPKDAS 411
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 86/144 (59%), Gaps = 48/144 (33%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 166
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 149 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 208
Query: 167 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 212
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 209 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 268
Query: 213 KLEAVNSRMNLTPTIEGFHPKDVS 236
KL VN +++ ++ F PKD S
Sbjct: 269 KLSTVNPQLDF--DVDNFIPKDAS 290
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 111 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 111 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 71/80 (88%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP YIHVRARRGQATDSHSLAER RREKIS+RM LQ LVPGC+KV GKALVLDEIIN
Sbjct: 130 DPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIIN 189
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
Y+QSLQ QVEFLSMKL +VN
Sbjct: 190 YVQSLQNQVEFLSMKLASVN 209
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 111 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 111 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 91 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 147
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 148 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 200
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEII+++QSL
Sbjct: 194 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSL 253
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVEFLSM+L AVN R++
Sbjct: 254 QRQVEFLSMRLAAVNPRIDF 273
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 202 SLQRQVEFLSMKLEAVNSRMN 222
SLQRQ+EFLSMKL A+ +N
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLN 199
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 98 LNDSN-GKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATD 156
LN SN G S+ E S E S +SS +DY+H+RA+RGQAT+
Sbjct: 90 LNPSNVGDQQTEVSSQTERNSLEENRTISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATN 149
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+QSLQRQVEFLSMKL
Sbjct: 150 SHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLAT 209
Query: 217 VNSRMNLTPTIEGFHPKDVSLS 238
VN + IE K + LS
Sbjct: 210 VNPELGF--DIEQILSKQMMLS 229
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 141 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 200
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN + IE K + LS
Sbjct: 201 SLQRQVEFLSMKLATVNPELGF--DIEQILSKQMMLS 235
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 109 SGSKNENGSKAEVEASSAAGNKPA--------ESSKPSEPPKDYIHVRARRGQATDSHSL 160
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 221 MNLTPTIEGF 230
++P + GF
Sbjct: 209 --MSPVLYGF 216
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/77 (84%), Positives = 71/77 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+Q
Sbjct: 383 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQ 442
Query: 202 SLQRQVEFLSMKLEAVN 218
SLQRQVE LSMK+ +VN
Sbjct: 443 SLQRQVESLSMKVASVN 459
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 109 SGSKNENGSKAEVEASSAAGNKPA--------ESSKPSEPPKDYIHVRARRGQATDSHSL 160
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 221 MNLTPTIEGF 230
++P + GF
Sbjct: 209 --MSPVLYGF 216
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 202 SLQRQVEFLSMKLEAVNSRMN 222
SLQRQ+EFLSMKL A+ +N
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLN 173
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 142 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 201
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN ++ IE K + LS
Sbjct: 202 SLQRQVEFLSMKLATVNPELSF--DIEQILSKQMMLS 236
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 86/106 (81%), Gaps = 8/106 (7%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
SK EV + A AES++ +DY+H+RA+RGQAT++HSLAER RREKI+ERMK L
Sbjct: 96 SKREVNSEKAGD---AESNR-----EDYVHIRAKRGQATNNHSLAERFRREKINERMKHL 147
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
QDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL AV+ +N
Sbjct: 148 QDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELN 193
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 123 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 182
Query: 202 SLQRQVEFLSMKLEAVNSRMN 222
SLQRQ+EFLSMKL A+ +N
Sbjct: 183 SLQRQIEFLSMKLSAIGPGLN 203
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSAND----LNDSNGKWMKTSGSKNENGSKAEVEASSAAG 128
G +D+ +E S +V D L+D+ + K S N + S
Sbjct: 28 GTLSQDIQMSEEHSGVVKKRKGVEDCVTLLHDAGDQQTKGSPQPERNSVEEGNRKISPKM 87
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+SS +DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ G
Sbjct: 88 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 147
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
KA++LDEIINY+QSLQRQVEFLSMKL VN + IE K + LS
Sbjct: 148 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGF--DIEQIISKQMLLS 195
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 133 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 192
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN + IE K + LS
Sbjct: 193 SLQRQVEFLSMKLSTVNPELGF--DIEQIISKQMMLS 227
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 109 SGSKNENGSKAEVEASSAAGNKP--------AESSKPSEPPKDYIHVRARRGQATDSHSL 160
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 221 MNLTPTIEGF 230
++P + GF
Sbjct: 209 --MSPVLYGF 216
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 133 ENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN + IE K + LS
Sbjct: 193 SLQRQVEFLSMKLATVNPELGF--DIEQILSKQMMLS 227
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 75/81 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DY+HVRARRG+ATDSHSLAERARREKISERMK LQ+LVPGCNK+ GKA +LDEIINY+QS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 203 LQRQVEFLSMKLEAVNSRMNL 223
LQ+QVEFLSMK+ A+N R++
Sbjct: 62 LQQQVEFLSMKVAALNHRVDF 82
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 85/127 (66%), Gaps = 12/127 (9%)
Query: 118 KAEVEASSAAGNKPAESSKPSEPP------------KDYIHVRARRGQATDSHSLAERAR 165
K E + K AE + P + P DYIHVRARRGQATDSHSLAER R
Sbjct: 123 KGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVR 182
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 225
RE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 183 RERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNI 242
Query: 226 TIEGFHP 232
+ F P
Sbjct: 243 VEDLFGP 249
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 118/198 (59%), Gaps = 19/198 (9%)
Query: 50 ESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTS 109
+S+ L G + VT C +KR+ S + SS + + +ND SNGK K
Sbjct: 87 DSAELPVGDQLKPAVTVTVTSPCSKKRK---SRNNSSASSAQSKGSND--QSNGKKAKNK 141
Query: 110 GSKNENGSKAEVEASSAAGNKPAESS-KPSE---PPKDYIHVRARRGQATDSHSLAERAR 165
G E E + + +G K E K SE YIHVRARRGQATDSHSLAER R
Sbjct: 142 GEVEEG---KERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVR 198
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS-----R 220
REKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL ++N R
Sbjct: 199 REKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFR 258
Query: 221 MNLTPTIEGFHPKDVSLS 238
M+L + P+ SLS
Sbjct: 259 MDLDGLM--IQPETTSLS 274
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 71/80 (88%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
E P YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKA++LDEIIN
Sbjct: 127 EAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIIN 186
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
Y+QSLQ QVEFLSMKL V+
Sbjct: 187 YVQSLQNQVEFLSMKLATVS 206
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 71/82 (86%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
P YIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+KV GKALVL+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 200 IQSLQRQVEFLSMKLEAVNSRM 221
+QSLQ QVEFLSMKL +VN +
Sbjct: 172 VQSLQHQVEFLSMKLASVNPML 193
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 85/142 (59%), Gaps = 48/142 (33%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 166
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 167 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 212
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 330 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 389
Query: 213 KLEAVNSRMNLTPTIEGFHPKD 234
KL VN +++ ++ F PKD
Sbjct: 390 KLSTVNPQLDF--DVDNFIPKD 409
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 85/115 (73%), Gaps = 12/115 (10%)
Query: 122 EASSAAGNKPAE------SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 175
E+ S G +P + S+ E K YIHVRARRGQATDSHSLAER RRE+ISERM++
Sbjct: 100 ESKSRRGKRPRKETEEKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRM 159
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
LQ LVPGC+KV GKA+VLDEIINY+QSLQ QVEFLSM++ +++P + GF
Sbjct: 160 LQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRI------ASMSPVLYGF 208
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 118/198 (59%), Gaps = 19/198 (9%)
Query: 50 ESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTS 109
+S+ L G + VT C +KR+ S + SS + + +ND SNGK K
Sbjct: 55 DSAELPVGDQLKPAVTVTVTSPCSKKRK---SRNNSSASSAQSKGSND--QSNGKKAKNK 109
Query: 110 GSKNENGSKAEVEASSAAGNKPAESS-KPSE---PPKDYIHVRARRGQATDSHSLAERAR 165
G E E + + +G K E K SE YIHVRARRGQATDSHSLAER R
Sbjct: 110 GEVEEG---KERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVR 166
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS-----R 220
REKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL ++N R
Sbjct: 167 REKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFR 226
Query: 221 MNLTPTIEGFHPKDVSLS 238
M+L + P+ SLS
Sbjct: 227 MDLDGLM--IQPETTSLS 242
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
SK SE P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +LD
Sbjct: 118 SKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLD 176
Query: 195 EIINYIQSLQRQVEFLS 211
EIINY+QSLQRQVEFLS
Sbjct: 177 EIINYVQSLQRQVEFLS 193
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 82/118 (69%), Gaps = 12/118 (10%)
Query: 118 KAEVEASSAAGNKPAESSKPSEPP------------KDYIHVRARRGQATDSHSLAERAR 165
K E + K AE + P + P DYIHVRARRGQATDSHSLAER R
Sbjct: 123 KGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVR 182
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
RE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 183 RERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNF 240
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 82/105 (78%), Gaps = 5/105 (4%)
Query: 118 KAEVEASSAAGNKP----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
KAE E S+ K E+S + P DYIHVRARRG+ATD HSLAERARREKIS++M
Sbjct: 109 KAEDETESSMKGKTNMSNTETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKM 167
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
K LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N
Sbjct: 168 KCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN 212
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 26 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 85
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVSLS 238
SLQRQVEFLSMKL VN + IE K + LS
Sbjct: 86 SLQRQVEFLSMKLSTVNPELGF--DIEQIISKQMMLS 120
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 82/118 (69%), Gaps = 12/118 (10%)
Query: 118 KAEVEASSAAGNKPAESSKPSEPP------------KDYIHVRARRGQATDSHSLAERAR 165
K E + K AE + P + P DYIHVRARRGQATDSHSLAER R
Sbjct: 123 KGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVR 182
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
RE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 183 RERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNF 240
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 17/162 (10%)
Query: 68 SGGGCGRKRRD--LSSEDESSKIVSTTSSANDLNDSNGKW----MKTSGSKNENGSKAEV 121
SGGG +++ D L ++ E K +L+ S+G+ K +G++ + A+
Sbjct: 87 SGGGSTKRKSDAYLDAKGEC-KRPRGKQQVCELDQSSGRGKPEKAKPAGTRKKGDVAAQK 145
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
+ AAG + DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVP
Sbjct: 146 QDPRAAGGQKT----------DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVP 195
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
GC+KV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 196 GCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNF 237
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 77/91 (84%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
E S+ E Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALV
Sbjct: 168 EGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALV 227
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIIN++Q LQRQVE LSM+L AVN R++
Sbjct: 228 LDEIINHVQFLQRQVEILSMRLAAVNPRIDF 258
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 9/167 (5%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S ++VS + N N +G
Sbjct: 119 GETTTSSVPSNSSANLDRVKTEPAETDSSQRLVSDQAVENQ--------SPCPSQNNRSG 170
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ E E + K +SS+ +E Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 171 KRKEFEKKVKSSTKKNKSSEETEK-LPYVHVRARRGQATDSHSLAERARREKINARMKLL 229
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
Q+LVPGC+K+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 230 QELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 276
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+++IHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGC+K GKA++LDEIINY+Q
Sbjct: 226 ENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQ 285
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
SLQ+QVEFLSMKL VN ++N +E KD
Sbjct: 286 SLQQQVEFLSMKLATVNPQLNF--NVEQICSKD 316
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 76/91 (83%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 202 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
SLQRQVEFLSMKL A+ N ++ HP
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLELQDDHP 239
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 8/126 (6%)
Query: 112 KNENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKIS 170
K + ++AE E S + + + SE K DYIHVRARRG+ATD HSLAERARREKIS
Sbjct: 105 KKKIKTEAETETSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKIS 164
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
++MK LQD+VPGC KV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E F
Sbjct: 165 KKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLN------PELE-F 217
Query: 231 HPKDVS 236
H ++S
Sbjct: 218 HINELS 223
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Query: 116 GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 175
+K E A K E++ + DYIHVRARRGQATDSHSLAER RRE+ISERM+
Sbjct: 120 AAKGRPEKPKACARKKPEAAAAGQK-TDYIHVRARRGQATDSHSLAERVRRERISERMRY 178
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LQ+LVPGC+KV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 179 LQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAAANPVVNF 226
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 111 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 169
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 170 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 199
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 123 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 181
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 182 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 211
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 71/79 (89%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 121 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 180
Query: 203 LQRQVEFLSMKLEAVNSRM 221
LQ+QVEFLSMKL +N +
Sbjct: 181 LQQQVEFLSMKLSVINPEL 199
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 127 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 185
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 186 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 215
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 127 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 185
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 186 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 215
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 127 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 185
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 186 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 215
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
E+S + P DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA
Sbjct: 127 TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 185
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
+LDEIINY+QSLQ+QVEFLSMKL +N +
Sbjct: 186 MLDEIINYVQSLQQQVEFLSMKLSVINPEL 215
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 77/92 (83%), Gaps = 2/92 (2%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRAR QAT+SHS+AE+ RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 145 YVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSL 204
Query: 204 QRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QRQVEFLSMKL VN R+ + IE KD+
Sbjct: 205 QRQVEFLSMKLSTVNPRLGV--DIELLLAKDI 234
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 3/104 (2%)
Query: 128 GNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
G+ + K +PPK +IHVRARRGQATD HSLAERARREKIS RMK LQ LVPGC++V
Sbjct: 130 GHSGKKVKKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEV 189
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
GKA++L+EIINY++SLQRQ+EFLSMKL AV+ R++ +EG
Sbjct: 190 TGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDT--NVEGL 231
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 73/81 (90%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++QSL
Sbjct: 197 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 256
Query: 204 QRQVEFLSMKLEAVNSRMNLT 224
QRQVE LSMKL AVN R++ +
Sbjct: 257 QRQVEILSMKLAAVNPRIDFS 277
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 204 QRQVEFLSMKLEAVNSRMNLT 224
QR+VEFLSM+L AVN R++ +
Sbjct: 64 QREVEFLSMRLAAVNPRIDFS 84
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 73/81 (90%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++QSL
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 204 QRQVEFLSMKLEAVNSRMNLT 224
QRQVE LSMKL AVN R++ +
Sbjct: 263 QRQVEILSMKLAAVNPRIDFS 283
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 190 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 249
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE+LSM+L AVN R++
Sbjct: 250 QRQVEYLSMRLAAVNPRVDF 269
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 202 LQKQVEFLSMKIAASN 217
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 177 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 236
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE+LSM+L AVN R++
Sbjct: 237 QRQVEYLSMRLAAVNPRVDF 256
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 202 LQKQVEFLSMKIAASN 217
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 73/80 (91%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE LSM+L AVN R++
Sbjct: 242 QRQVEMLSMRLAAVNPRIDF 261
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 139 EPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
+PPK +IHVRARRGQAT+SHSLAERARREKIS RMK LQ LVPGC++V GKA++L+EII
Sbjct: 10 QPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEII 69
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDVS 236
NY++SLQRQ+EFLSMKL AV+ R++ +EG +V
Sbjct: 70 NYVKSLQRQIEFLSMKLAAVDPRLD--TNVEGLLKMEVC 106
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 72/80 (90%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE LSM+L AVN R+
Sbjct: 241 QRQVEMLSMRLAAVNPRVEF 260
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 71/80 (88%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC K+ G ALVLDEIIN++Q+L
Sbjct: 170 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTL 229
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE LSMKL AVN R++
Sbjct: 230 QRQVEILSMKLAAVNPRIDF 249
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 71/76 (93%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 202 SLQRQVEFLSMKLEAV 217
SLQRQVEFLSMKL A+
Sbjct: 209 SLQRQVEFLSMKLSAI 224
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 78/91 (85%), Gaps = 5/91 (5%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
E KP+ Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALV
Sbjct: 71 EDEKPA-----YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALV 125
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 126 LDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 156
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 209 LQKQVEFLSMKIAASN 224
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
A KPA + E P Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV
Sbjct: 138 AEEKPAAAGGEDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKV 196
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
G ALVLDEIIN++QSLQRQVE+LSM+L VN R
Sbjct: 197 SGTALVLDEIINHVQSLQRQVEYLSMRLATVNPR 230
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE+LSM+L AVN R++
Sbjct: 164 QRQVEYLSMRLAAVNPRVDF 183
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%)
Query: 116 GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 175
G + E++ K S Y+HVRARRGQATDSHSLAERARREKI+ RMK+
Sbjct: 2 GKRKELDKKVKGSTKMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKL 61
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
L++LVPGC+K+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 62 LRELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 109
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE+LSM+L AVN R++
Sbjct: 203 QRQVEYLSMRLAAVNPRVDF 222
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 121/229 (52%), Gaps = 22/229 (9%)
Query: 1 MDPPLVNESSFSAA------NPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSAL 54
+DP +V S F+ NPS ++ PF +N + A GN+ GF
Sbjct: 20 IDPSMVALSQFTEVSQAILDNPSVNNIHSFMPFTSDNFFSHQAPEFPGNLAEGFAGIFHQ 79
Query: 55 RDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNE 114
D ++ + + G SE + SK + + ++ + SGSK
Sbjct: 80 NDQTVMPVSQPFTTPGN--------ESEFQESKKRKAMDVSESSSMNSSPQVSESGSKRR 131
Query: 115 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 174
N + + G K E KP KD +HVRARRGQATDSHSLAER RR KI+ER++
Sbjct: 132 NVNSSR----RGKGVKSNEDGKP----KDVVHVRARRGQATDSHSLAERVRRGKINERLR 183
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
LQD+VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ +
Sbjct: 184 CLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 232
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 72/80 (90%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G LVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
QRQVE LSM+L AVN R++
Sbjct: 242 QRQVEMLSMRLAAVNPRIDF 261
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 67/71 (94%)
Query: 138 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
S+PP+DYIHVRAR+GQATDSHSL ER RREKISERMK+LQ+LVPGCNKV GKA +LDEII
Sbjct: 123 SKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEII 182
Query: 198 NYIQSLQRQVE 208
NY+QSLQRQVE
Sbjct: 183 NYVQSLQRQVE 193
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 203 LQRQVEFLSMKLEAVN 218
LQ+QVEFLSMK+ A N
Sbjct: 202 LQKQVEFLSMKIAASN 217
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 94/151 (62%), Gaps = 13/151 (8%)
Query: 75 KRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAES 134
KRR +S E S T+S + GK + GS+ + +S +P E
Sbjct: 90 KRRMVSIER------SGTTSLGSAQEMVGKQLHMDGSRKHQRNN---NVASVKEKRPREH 140
Query: 135 S----KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
E P YIHVRA+RGQA DSHSLAER RREKISE+M +LQ LVPGC+KV GKA
Sbjct: 141 GGADVDVKEAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKA 200
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
++LDEII+Y+QSLQ QVEFLSMKL ++N M
Sbjct: 201 MMLDEIISYVQSLQNQVEFLSMKLASLNPMM 231
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ +KP EPPKDYIHVRARRGQ DSH AER RREKISE + +LQDLVP +++ GKA
Sbjct: 6 ADDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKAD 65
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
LDEIINY+QSL+RQVE L MKL +N RM
Sbjct: 66 SLDEIINYVQSLKRQVELLYMKLATINPRM 95
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%), Gaps = 4/98 (4%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 189 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 248
Query: 204 QRQVEFLSMKLEAVNSRMNLT----PTIEGFHPKDVSL 237
Q +VE LSMKL AVN ++ EG P D +
Sbjct: 249 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNF 286
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P ++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 201 QSLQRQVEFLSMKLEAVN 218
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%), Gaps = 4/98 (4%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 185 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 244
Query: 204 QRQVEFLSMKLEAVNSRMNLT----PTIEGFHPKDVSL 237
Q +VE LSMKL AVN ++ EG P D +
Sbjct: 245 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNF 282
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 8/153 (5%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSG--SKNENGSKAEVEASSAAGNK 130
+ R D SE++ ++ + SS+ + N + ++ + K + K E S+ K
Sbjct: 123 AKSRPDCVSENQRKFVLGSNSSSPNKNAEDNFNVEPTEILDKADKTQKVEHRLSANFNTK 182
Query: 131 PAE------SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
P S P ++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+
Sbjct: 183 PDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCH 242
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
++ GK +VLDEIINY+QSLQ+QVEFLSMKL +V
Sbjct: 243 QITGKTVVLDEIINYVQSLQQQVEFLSMKLASV 275
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 70/80 (87%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 204 QRQVEFLSMKLEAVNSRMNL 223
Q +VE LSMKL AVN ++
Sbjct: 217 QHEVEILSMKLAAVNPIIDF 236
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P ++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 201 QSLQRQVEFLSMKLEAVN 218
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P ++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 201 QSLQRQVEFLSMKLEAVN 218
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 74/90 (82%)
Query: 130 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
K +S + E PK+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G
Sbjct: 56 KRTKSKEDDEKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 115
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
A++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 116 AVMLDEIINYVQSLQNQVEFLSMKLTAAST 145
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 68/77 (88%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P ++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 201 QSLQRQVEFLSMKLEAV 217
+SLQ QVEFL KL ++
Sbjct: 96 KSLQNQVEFLVGKLASI 112
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Query: 124 SSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
SS G + +S K E P++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPG
Sbjct: 123 SSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 182
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL---TPTIE 228
C K +G A++LDEIINY+QSLQ QVEFLSMKL A + + T T+E
Sbjct: 183 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSDTDTLE 231
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK--VIGKALVLDEIINYIQ 201
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K + G ALVLD+IIN++Q
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 202 SLQRQVEFLSMKLEAVNSRMNLT 224
SLQRQVEFLSM+L AV R++ +
Sbjct: 89 SLQRQVEFLSMRLAAVTPRIDFS 111
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 11/154 (7%)
Query: 78 DLSSEDESSKIVSTTSSANDLNDSNGKWM--------KTSGSKNENGSKAEVEASSAAGN 129
DL + SS ++ + + D N +N + + G+K E+GSK + S
Sbjct: 30 DLPASTPSSFMLFSNGALVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSEEEE- 88
Query: 130 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
A + ++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G
Sbjct: 89 --AMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGM 146
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
A++LD II+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 147 AVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDL 180
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 11/154 (7%)
Query: 78 DLSSEDESSKIVSTTSSANDLNDSNGKWM--------KTSGSKNENGSKAEVEASSAAGN 129
DL + SS ++ + + D N +N + + G+K E+GSK + S
Sbjct: 30 DLPASTPSSFMLFSNGALVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSEEEE- 88
Query: 130 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
A + ++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G
Sbjct: 89 --AMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGM 146
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
A++LD II+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 147 AVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDL 180
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 8/88 (9%)
Query: 144 YIHVRARRGQATDSHSLAER--------ARREKISERMKILQDLVPGCNKVIGKALVLDE 195
Y+HVRARRGQATD+HSLAER ARREKI+ RMK+LQ+LVPGC+K+ G ALVLDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNL 223
IIN++Q+LQRQVE LSM+L AVN R++
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRIDF 213
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 8/153 (5%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSG--SKNENGSKAEVEASSAAGNK 130
+ R D SE++ ++ + SS+ + N + ++ + K + K E S+ K
Sbjct: 123 AKSRPDCVSENQRKFVLGSNSSSPNKNAEDNFNVEPTEILDKADKTQKVEHRLSANFNTK 182
Query: 131 PAE------SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
P S P ++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+
Sbjct: 183 PDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCH 242
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
++ GK +VLDEIINY+QSLQ+QVE LSMKL +V
Sbjct: 243 QITGKTVVLDEIINYVQSLQQQVELLSMKLASV 275
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 71/85 (83%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
E P++ +HVRARRGQATDSHS+AER RR KI+ER++ LQD+VPGC K +G A++LDEIIN
Sbjct: 145 EKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 204
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNL 223
Y+QSLQ QVEFLSMKL A +S +
Sbjct: 205 YVQSLQNQVEFLSMKLTAASSYHDF 229
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 138 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II
Sbjct: 38 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 97
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNL 223
+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 98 DYVRSLQNQIEFLSMKLSAASACYDL 123
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Query: 98 LNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDS 157
++ S M + +E+GSK SS G + + + E ++ +HVRARRGQATDS
Sbjct: 110 MDVSESSCMNSYPRVSESGSKKR--KSSRRGKRVKSNEEEEEKTREVVHVRARRGQATDS 167
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HSLAER RR KI+ER++ LQD+VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 168 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAA 227
Query: 218 NSRMNLTPTIEG 229
++ + E
Sbjct: 228 STFYDFNAETEA 239
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
E ++ +HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIIN
Sbjct: 141 EKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIIN 200
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNL 223
Y+QSLQ QVEFLSMKL A +S +
Sbjct: 201 YVQSLQNQVEFLSMKLTAASSYYDF 225
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 8/115 (6%)
Query: 109 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
SGSK +N SS G + +S + P + +HVRA+RGQATDSHSLAER RR K
Sbjct: 103 SGSKTKN--------SSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGK 154
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
I+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ +L
Sbjct: 155 INEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDL 209
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 134 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 193
Query: 201 QSLQRQVEFLSMKLEAVNS 219
QSLQ Q+EFLSMKL A ++
Sbjct: 194 QSLQNQIEFLSMKLSAAST 212
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 117 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 176
Query: 201 QSLQRQVEFLSMKLEAVNS 219
QSLQ Q+EFLSMKL A ++
Sbjct: 177 QSLQNQIEFLSMKLSAAST 195
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 70/83 (84%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 113 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 172
Query: 201 QSLQRQVEFLSMKLEAVNSRMNL 223
QSLQ Q+EFLSMKL A ++ +
Sbjct: 173 QSLQNQIEFLSMKLSAASTFYDF 195
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
E+GSK ++ SS G + + E K+ +HVRARRGQATDSHSLAER RR KI+E++
Sbjct: 125 ESGSK--IKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKL 182
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
+ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLS+KL A ++
Sbjct: 183 RCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAAST 228
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 69/82 (84%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
++ +HVRARRGQATDSHSLAER RR KI+ER++ L+D+VPGC K +G A++LDEIINY+Q
Sbjct: 143 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQ 202
Query: 202 SLQRQVEFLSMKLEAVNSRMNL 223
SLQ QVEFLSMKL A +S +
Sbjct: 203 SLQNQVEFLSMKLAAASSFYDF 224
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 21/147 (14%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPA 132
G+KR+ + + TSSAN ++ + +E+GSK ++ SS G +
Sbjct: 102 GKKRKSMD--------LPETSSAN-----------STPAVSESGSK--IKHSSGRGKRVK 140
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
+ E K+ +HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G A++
Sbjct: 141 SNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVM 200
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNS 219
LDEIINY+QSLQ QVEFLS+KL A ++
Sbjct: 201 LDEIINYVQSLQHQVEFLSLKLTAAST 227
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 205 RQVEFLSMKLEAVNS 219
QVEFLSMKL A +S
Sbjct: 203 NQVEFLSMKLTAASS 217
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/67 (86%), Positives = 62/67 (92%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 202 SLQRQVE 208
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 206 QVEFLSMKLEAVNSRMNL---TPTIEGFHPK 233
QVEFLSMKL A +S + T +E K
Sbjct: 206 QVEFLSMKLTAASSYYDFNSETDAVESMQAK 236
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 206 QVEFLSMKLEAVNSRMNL 223
QVEFLSMKL A +S +
Sbjct: 206 QVEFLSMKLTAASSYYDF 223
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 206 QVEFLSMKLEAVNSRMNL 223
QVEFLSMKL A +S +
Sbjct: 195 QVEFLSMKLTAASSYYDF 212
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 4/126 (3%)
Query: 98 LNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDS 157
+ S ++ + S NE K + S NK E K E IHVRA+RGQATDS
Sbjct: 103 MEQSTSSYISPTASTNETKKKNNLGGSKKGENKEKEGDKAEE----VIHVRAKRGQATDS 158
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
HS+AER RREKI+ +++ LQDLVPGC++ +G A++L+EIINY+ SLQ QVEFLSM+L A
Sbjct: 159 HSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAA 218
Query: 218 NSRMNL 223
+S +L
Sbjct: 219 SSSNDL 224
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 67/80 (83%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 205 RQVEFLSMKLEAVNSRMNLT 224
QVEFLSMKL A +S + +
Sbjct: 1086 NQVEFLSMKLNAASSFYDFS 1105
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 205 RQVEFLSMKLEAVNSRMNL 223
QVEFLSMKL A +S +
Sbjct: 1097 NQVEFLSMKLTAASSFYDF 1115
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 69/75 (92%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 209 FLSMKLEAVNSRMNL 223
+LSM+L AVN R++
Sbjct: 61 YLSMRLAAVNPRVDF 75
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 130 KPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+PA+ K P EPP Y+HVRARRG+ATDSHSLAER RREKIS RMK+LQ LVPGC+K+
Sbjct: 142 RPAKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKIT 201
Query: 188 GKALVLDEIINYIQSLQRQVE 208
GKALVLDEII+Y+Q L+ +V+
Sbjct: 202 GKALVLDEIISYVQFLKDRVQ 222
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+HVRARRGQATDSHSLAER RR KI+E++K LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 205 RQVEFLSMKLEAVNSRMNLTPTI 227
QVEFLSMKL A ++ + I
Sbjct: 210 HQVEFLSMKLTAASTFYDFNSEI 232
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 8/115 (6%)
Query: 109 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 168
SGSK +N S G + + + P + +HVRA+RGQATDSHSLAER RR K
Sbjct: 97 SGSKTKN--------SCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGK 148
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
I+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ +
Sbjct: 149 INEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDF 203
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 62/66 (93%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 203 LQRQVE 208
LQ+QVE
Sbjct: 202 LQKQVE 207
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
Query: 78 DLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK- 136
D S ED+ +++++ T K +K + + K+ V +++ +P + K
Sbjct: 6 DYSEEDQVTQVMTPTMGQMRKQSLPTKKVKKESKREKRNPKSSV-STNLERQRPTKRQKK 64
Query: 137 --PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
P E P Y+HVRARRG+ATDSHSLAER RRE+IS +MK+LQ LVPGC+++ GKAL+LD
Sbjct: 65 APPLEHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILD 124
Query: 195 EIINYIQSLQRQVEFLSMKLEAVN 218
EII Y+QSL+ ++ L +L VN
Sbjct: 125 EIIRYVQSLKDRIGSLEAELVLVN 148
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 107/214 (50%), Gaps = 56/214 (26%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S +++S ++ N + N N NG
Sbjct: 123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPN--------QNNRNG 174
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ + E + K +SS+ +E Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 175 KRKDFEKKGKSSTKKNKSSEENEK-LPYVHVRARRGQATDSHSLAERARREKINARMKLL 233
Query: 177 QDLVPGCNK-----------------------------------------------VIGK 189
Q+LVPGC+K + G
Sbjct: 234 QELVPGCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGT 293
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 294 ALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 327
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 64/75 (85%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 205 RQVEFLSMKLEAVNS 219
QVE LSMKL A +S
Sbjct: 206 NQVELLSMKLTAASS 220
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
K+ IHVRA+RGQATDSHS+AER RREKI+ +++ LQD+VPGC+K +G A++L+EIINY+
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 202 SLQRQVEFLSMKLEAV---NSRMNLT 224
SLQ QVEFLSM+L A N NLT
Sbjct: 213 SLQNQVEFLSMELAAASCSNDLKNLT 238
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 67/79 (84%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
IHVRA+RGQATDSHS+AER RREKI+ +++ LQDLVPGC+K +G A++L+EIINY+ SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 205 RQVEFLSMKLEAVNSRMNL 223
QVEFLSM+L A + +L
Sbjct: 207 NQVEFLSMELAAASCSYDL 225
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P + IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC K G A++LDEIINY+
Sbjct: 196 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYV 255
Query: 201 QSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
SLQ QVEFLS +L A +S N E
Sbjct: 256 HSLQNQVEFLSRELAAASSLHNFNSETEA 284
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 66/78 (84%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 206 QVEFLSMKLEAVNSRMNL 223
QVEFLS+KL A ++ +
Sbjct: 216 QVEFLSLKLTAASTYYDF 233
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 69/109 (63%), Gaps = 29/109 (26%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN----------------- 184
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 185 ------------KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
KV GKA++LDEIINY+QSLQ QVE + L + S +
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSALSAL 381
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI-----GKALVLDE 195
P + IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC KV G A++LDE
Sbjct: 142 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDE 201
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
IINY+ SLQ QVEFLS +L A +S N E
Sbjct: 202 IINYVHSLQNQVEFLSRELAAASSLHNFNSETEAI 236
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 60/69 (86%)
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
K + +DYIHVRARRG+ATDSHSLAER RRE+ISERMK L+ LVPGCNK+ GKA +LDE
Sbjct: 139 KNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDE 198
Query: 196 IINYIQSLQ 204
IINY+QSLQ
Sbjct: 199 IINYVQSLQ 207
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 99/150 (66%), Gaps = 16/150 (10%)
Query: 62 STVTEQSGGGCGRKRRDL--SSEDESS--KIVSTT--SSANDLNDSNGKWMKTSGSKNEN 115
S VT QS G R+R+ +SED+S+ + VST+ S DL D+ K K + S ++N
Sbjct: 29 SAVTGQSSGSRPRRRQREPPASEDDSASARPVSTSGGSGGQDLTDAEAKRFKANKSSDDN 88
Query: 116 GS-KAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERM 173
GS + + EA S +K + + P PPK D+IHVRARRGQATDSHSLAERARREKI+ERM
Sbjct: 89 GSFRKDAEADSRNASKAVDQNPP--PPKQDFIHVRARRGQATDSHSLAERARREKITERM 146
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSL 203
KILQDLVPGCNK++ L Y QS+
Sbjct: 147 KILQDLVPGCNKLMRPWL------GYWQSI 170
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 111/188 (59%), Gaps = 27/188 (14%)
Query: 1 MDPPL---VNESSFSAA--NPSSYSLAEIWPFPINNGGAGDAG------LRMG-----NM 44
MDPP V +SF +A + +SY+L+EIWP PIN G+G G LR G N+
Sbjct: 1 MDPPASMKVTGNSFQSAIGDTASYNLSEIWPLPIN--GSGRVGAADGLELRRGPFGSTNL 58
Query: 45 GHGFGESSALRDGSMEESTVTEQSGGGCG---RKRRDLSSEDESSKIVSTTSSANDLNDS 101
G ++ R+ V EQ+GG CG RKRR++ EDE++ VS +
Sbjct: 59 GQLVEAANLNREVCGNGYLVLEQAGGCCGGTARKRREV--EDEAANGVS--GGGGNYVHE 114
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK-PSEPPKDYIHVRARRGQATDSHSL 160
GK +K+SG +EN ++V+A G + +++K P +P KDYIHVRARRGQATDSHSL
Sbjct: 115 GGKRLKSSGPNDEN-QNSKVDAELGTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSL 173
Query: 161 AERARREK 168
AERARREK
Sbjct: 174 AERARREK 181
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P Y+HVRARRG+ATD HSLAER RR+KIS RMK+LQ LVPGC+K+ GKA +LDEII
Sbjct: 156 HPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIR 215
Query: 199 YIQSLQRQVEFLSMKLEA-------VNSRMN 222
++ SLQ QVEFL+ K + VN MN
Sbjct: 216 HVLSLQNQVEFLAAKFTSENGIANEVNYEMN 246
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 61/70 (87%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
E PK+ IHVRA+RGQATDSHSLAER RRE+I+E+++ LQDLVPGC K +G A++LD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 199 YIQSLQRQVE 208
Y+QSLQ Q+E
Sbjct: 173 YVQSLQNQIE 182
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+QSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 207 VE 208
VE
Sbjct: 61 VE 62
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 70/106 (66%), Gaps = 12/106 (11%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAER--------ARREKISERMKILQDLVPGCN--KVIG 188
EPPKDYIHVRARRGQATDSHSLAER A + + D + +V G
Sbjct: 266 EPPKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTG 325
Query: 189 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
KA++LDEIINY+QSLQRQVEFLSMKL VN +++ ++ F PKD
Sbjct: 326 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDF--DVDNFIPKD 369
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
E+G+K + SS G + + E K+ ++VRAR GQATDS +LAER RR KI+E++
Sbjct: 122 ESGNK--FKHSSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKL 179
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 229
+ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLS+KL A ++ + I+
Sbjct: 180 RYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDA 235
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 18/88 (20%)
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
KP EP KDYIHVR RE+ISERMK+LQ LVPGCNK+ GKAL+LDE
Sbjct: 194 KP-EPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDE 235
Query: 196 IINYIQSLQRQVEFLSMKLEAVNSRMNL 223
IINY+QSLQRQVEFLSMKL +N +++
Sbjct: 236 IINYVQSLQRQVEFLSMKLATMNPQLDF 263
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RARRGQATDSH+LAER RR KI+E+++ LQ++VPGC K + A++LDEIINY+QSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 208 EFLSMKLEAVNSRMNLTPTIEGF 230
EFLS++L A ++ + I+ F
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAF 234
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 62/77 (80%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 201
+D+I VRARRGQATDS S+AE R EKI +RMK LQDLVPGC KV GK +LDEIINY+Q
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 202 SLQRQVEFLSMKLEAVN 218
SLQ Q E LSMKL AV+
Sbjct: 66 SLQCQAESLSMKLGAVH 82
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE P
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLN--TGIEASPP 58
Query: 233 KD 234
KD
Sbjct: 59 KD 60
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 11/110 (10%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
E+GSK ++ S G + E K+ +HVRARRGQATDSHSLAER RR KI+E++
Sbjct: 124 ESGSKTKL--SGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKL 181
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
K LQ++VPGC K +G A++LDEIINY FLS+KL A ++ +
Sbjct: 182 KCLQNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDF 222
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
+++VRARRG+A DSHSLAER RR+KIS +MK+LQ LVPGC+K GK +LD IINYI SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 204 QRQVEFLSMKLEAVN 218
Q QV+ L +L V+
Sbjct: 193 QDQVKSLMEELALVD 207
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 123 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
A+S PA S + PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 160 AASGGTAAPASSGGGAAPPRQ-TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPN 218
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 219 ANKT-DKASMLDEIIDYVKFLQLQVKVLSM 247
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 119 AEVEASSAAGNKP-AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
A+ A++A N+P A S P + VRARRGQATD HS+AER RRE+I+ERMK LQ
Sbjct: 8 AQGAATTAVMNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 67
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 68 ELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 101
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 13/93 (13%)
Query: 141 PKDYIHVRARRGQATDSHSL---AERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
P+D + R+ + D+ SL + RRE+ISERM++LQ LVPGC+KV GKAL+LDEII
Sbjct: 56 PQD----KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEII 111
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
NY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 112 NYVQSLQNQVEFLSMRIAS------LSPVLYGF 138
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 11/96 (11%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 295 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 344
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
QDLVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 345 QDLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 379
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 110 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
GS + ++++ AS+ G A+ P PK VRARRGQATD HS+AER RRE+I
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQ---PQTKPK----VRARRGQATDPHSIAERLRRERI 152
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 153 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 110 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
GS + ++++ AS+ G A+ P PK VRARRGQATD HS+AER RRE+I
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQ---PQTKPK----VRARRGQATDPHSIAERLRRERI 152
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 153 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 110 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
GS + ++++ AS+ G +++P PK VRARRGQATD HS+AER RRE+I
Sbjct: 157 GSGGQTQTQSQATASATTG---GATAQPQTKPK----VRARRGQATDPHSIAERLRRERI 209
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 210 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 9/94 (9%)
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
A+V+ + +GN + S+KP RARRGQATD HS+AER RREKISERMK LQD
Sbjct: 300 ADVQHKANSGNGNSASAKP--------RARARRGQATDPHSIAERLRREKISERMKNLQD 351
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
LVP NK K+ +LDEII+Y++ LQ QV+ LSM
Sbjct: 352 LVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLSM 384
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 190 VEFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 88
Query: 206 QVEFLSM-KLEAVNSRMNLTPTIEG 229
QV+ LSM +L + +N P EG
Sbjct: 89 QVKVLSMSRLGGAGALVNSDPPAEG 113
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
PA S P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA
Sbjct: 88 PATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKA 146
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEII+Y++ LQ QV+ LSM
Sbjct: 147 SMLDEIIDYVKFLQLQVKVLSM 168
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
S +A N+ S P++P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 179 SVSATNQAPASGAPAQPRQK---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 235
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSM 212
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 236 NKT-DKASMLDEIIDYVKFLQVQVKVLSM 263
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
S +A N+ S P++P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 176 SVSATNQAPASGAPAQPRQK---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 232
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSM 212
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 233 NKT-DKASMLDEIIDYVKFLQVQVKVLSM 260
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI++
Sbjct: 50 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVD 108
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 109 YVKFLRLQVKVLSM 122
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 207 VEFLSM-KLEAVNSRMNLTP--TIEGFHPKDVS 236
V+ LSM +L A + + L EG+H + +S
Sbjct: 379 VKVLSMSRLGAPGAVLPLLTESQTEGYHGQPLS 411
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI++
Sbjct: 149 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVD 207
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 208 YVKFLRLQVKVLSM 221
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 49/57 (85%)
Query: 162 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
ER RRE+I ERMK LQ LVPGCNK+ GKA +L+EIINY+QSLQRQVEFLSMKL VN
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVN 59
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 61/104 (58%), Gaps = 31/104 (29%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
EV+ SS G P E DYIHVRA+RGQAT+SHSLAER
Sbjct: 228 EVKMSSQTGEAPKE---------DYIHVRAKRGQATNSHSLAER---------------- 262
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+ GKA++LDEIINY+QSLQRQVEFLSMKL V MN+
Sbjct: 263 ------ITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNV 300
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLA 58
Query: 233 KDV 235
KD+
Sbjct: 59 KDI 61
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 107 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 166
++ G +G A V +S G P + VRARRGQATD HS+AER RR
Sbjct: 174 QSFGGPAASGGTAPVTSSGGGGTAPPRQQR----------VRARRGQATDPHSIAERLRR 223
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
E+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 224 ERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 107 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 166
++ G +G A V +S G P + VRARRGQATD HS+AER RR
Sbjct: 174 QSFGGPAASGGTAPVTSSGGGGTAPPRQQR----------VRARRGQATDPHSIAERLRR 223
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
E+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 224 ERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 268
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 375
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILD 191
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 192 YVKFLRLQVKVLSM 205
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
A KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 96 AQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT 155
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 156 -DRAAMLDEILDYVKFLRLQVKVLSM 180
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
A KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 95 AQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT 154
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 155 -DRAAMLDEILDYVKFLRLQVKVLSM 179
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
+ P+ PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LD
Sbjct: 236 TTPAAQPKQQ-RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLD 293
Query: 195 EIINYIQSLQRQVEFLSM 212
EII+Y++ LQ QV+ LSM
Sbjct: 294 EIIDYVKFLQLQVKVLSM 311
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
+AS + G PA+ + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 240 QASGSTGGAPAQPRQ---------RVRARRGQATDPHSIAERLRRERIAERMKALQELVP 290
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 291 NANKT-DKASMLDEIIDYVKFLQLQVKVLSM 320
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 340
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 32/155 (20%)
Query: 89 VSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAA---GNKPAESSKPSE-----P 140
++T+ SA+ W + SK + K +++ + + G +P + +K + P
Sbjct: 199 LNTSKSADGEQPKGLPWENSEFSKEQEEKKQKIDQNMSPNLRGKQPNKHAKDNSSNGEAP 258
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
++YIHVRARRGQAT+SHSLAER + GKA++LDEIINY+
Sbjct: 259 KENYIHVRARRGQATNSHSLAER----------------------ITGKAVMLDEIINYV 296
Query: 201 QSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 297 QSLQQQVEFLSMKLATVNPELNI--DIERLLSKDI 329
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 131 PAESSKPSEPPKDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
P S+ + P + IH VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK
Sbjct: 116 PTSSTTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDR 175
Query: 189 KALVLDEIINYIQSLQRQVEFLSM 212
ALV DEI++Y++ L+ QV+ LSM
Sbjct: 176 AALV-DEILDYVKFLRLQVKVLSM 198
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
A KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 4 AQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT 63
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 64 -DRAAMLDEILDYVKFLRLQVKVLSM 88
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 11/94 (11%)
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
A+ +A+SA GN + S+KP RARRGQATD HS+AER RREKISERMK LQD
Sbjct: 301 AQNKANSANGN--SASAKP--------RARARRGQATDPHSIAERLRREKISERMKNLQD 350
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
LVP NK K+ +LDEII+Y++ LQ QV+ L M
Sbjct: 351 LVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLCM 383
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
PA S P + VRARRGQAT HS+AER RRE+I+ERMK LQ+LVP NK KA
Sbjct: 244 PATGSAGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKT-DKA 302
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEII+Y++ LQ QV+ LSM
Sbjct: 303 SMLDEIIDYVKFLQLQVKVLSM 324
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
PP VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++
Sbjct: 134 HPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILD 192
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 193 YVKFLRLQVKVLSM 206
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 23/92 (25%)
Query: 133 ESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
ESS+ E PK+ YIH+RARRGQAT+SHSLAER + GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAER----------------------ITGKAV 228
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 229 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI 260
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 219 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 268
Query: 177 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 269 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 303
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 283
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
MK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ L + F P
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELG-ADDSFVP 59
Query: 233 KD 234
+D
Sbjct: 60 RD 61
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 194
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 311
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
S A PA S + P+ VRARRGQATD HS+AER RREKI+ERMK LQ+LVP
Sbjct: 332 SQTASTAPAASCNGTGKPR----VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 387
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+KV KA +LDEII Y++ LQ QV+ LSM
Sbjct: 388 SKV-DKASMLDEIIEYVKFLQLQVKVLSM 415
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 232
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 89
Query: 206 QVEFLSM 212
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 79/136 (58%), Gaps = 18/136 (13%)
Query: 77 RDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK 136
R L+S + S +T + N+++G G N V A+ AAGN + K
Sbjct: 245 RHLNSGQQLSSFDATRNPEQSSNEASG------GGTGLNAPPFMVPANGAAGNG---APK 295
Query: 137 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
P VRARRGQATD HS+AER RREKIS+RMK LQ+LVP N+ KA +LDEI
Sbjct: 296 P--------RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEI 346
Query: 197 INYIQSLQRQVEFLSM 212
I Y++ LQ QV+ LSM
Sbjct: 347 IEYVKFLQLQVKVLSM 362
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 255
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 262
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
P S S+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 147 PGVVSAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRA 205
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
++DEI++Y++ L+ QV+ LSM
Sbjct: 206 AMIDEIVDYVKFLRLQVKVLSM 227
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQVQ 202
Query: 207 VEFLSM-KLEAVNSRMNLTPTIEGFHPKD 234
V+ LSM +L + + P + P+D
Sbjct: 203 VKVLSMSRLGGAGA---VAPLVANMSPED 228
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
VRARRGQATD HS+AER RRE+I+ERMK LQDLVP NK KA +LDEI++Y++ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKT-DKASMLDEIVDYVKFLQL 61
Query: 206 QVEFLSM 212
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++Y
Sbjct: 235 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDY 291
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 292 VKFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++Y
Sbjct: 234 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDY 290
Query: 200 IQSLQRQVEFLSM 212
++ LQ QV+ LSM
Sbjct: 291 VKFLQLQVKVLSM 303
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 11/98 (11%)
Query: 115 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 174
+ S + +A+SA GN + S+KP RARRGQATD HS+AER RREKISERMK
Sbjct: 299 HSSDVQPQANSAHGN--SVSAKPRS--------RARRGQATDPHSIAERLRREKISERMK 348
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
LQ+LVP NK K+ +LDEII+Y++ LQ QV+ LSM
Sbjct: 349 NLQELVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLSM 385
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
+P PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDE
Sbjct: 121 QPQTKPK----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDE 175
Query: 196 IINYIQSLQRQVEFLSM 212
II+Y++ LQ QV+ LSM
Sbjct: 176 IIDYVKFLQLQVKVLSM 192
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII++++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDHVKFLQLQ 378
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 275
Query: 207 VEFLSM 212
V+ LS+
Sbjct: 276 VKVLSV 281
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A++LDEI++
Sbjct: 114 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAVMLDEILD 172
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 173 YVKFLRLQVKVLSM 186
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 354
Query: 207 VEFLSM-KLEAVNSRMNLTPTIEGFHPKDVSLS 238
V+ LSM +L A + + L + K +SLS
Sbjct: 355 VKVLSMSRLGAAEAVVPLITDGQAEGSKGLSLS 387
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A +++P PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 155 AVAAQP-HPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAA 212
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 213 MLDEIVDYVKFLRLQVKVLSM 233
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRG ATD HS+AER RREKI+ERMK LQ+LVP NKV KA +LDEII Y++ LQ Q
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKV-DKASMLDEIIEYVKFLQLQ 298
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 299 VKVLSM 304
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 89 VKVLSM 94
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
P + PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 135 PVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRA 193
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 194 AMLDEIVDYVKFLRLQVKVLSM 215
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 44/45 (97%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV
Sbjct: 248 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 5/80 (6%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 207 VEFLSMK----LEAVNSRMN 222
V+ LSM AV R+N
Sbjct: 158 VKVLSMSRLGGAGAVGPRLN 177
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 207
Query: 207 VEFLSM-KLEAVNSRMNLTPTIEGFHPKDVSLS 238
V+ LSM +L A + + L + K +SLS
Sbjct: 208 VKVLSMSRLGAAEAVVPLITDGQAEGSKGLSLS 240
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 116 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 174
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 175 YVKFLRLQVKVLSM 188
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +LDEI++
Sbjct: 12 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVD 70
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 71 YVKFLRLQVKVLSM 84
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
SSA +P PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 83 SSAVAAQP-------HPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSA 135
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSM 212
NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 136 NKT-DRAAMLDEIVDYVKFLRLQVKVLSM 163
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--- 187
PA S P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NKVI
Sbjct: 269 PATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPT 328
Query: 188 --GKALVLDEIINYIQSLQRQ 206
KA +LDEII+Y++ LQ Q
Sbjct: 329 LTDKASMLDEIIDYVKFLQLQ 349
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
P + PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 159 PVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRA 217
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 218 AMLDEIVDYVKFLRLQVKVLSM 239
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
PA ++ PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A
Sbjct: 164 PASNAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRA 222
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 223 AMLDEIVDYVKFLRLQVKVLSM 244
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +LDEI++
Sbjct: 8 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVD 66
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ Q++ LSM
Sbjct: 67 YVKFLRLQIKVLSM 80
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVD 219
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 220 YVKFLRLQVKVLSM 233
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVD 216
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 217 YVKFLRLQVKVLSM 230
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 136 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 195
+P +PP RARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDE
Sbjct: 115 QPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDE 173
Query: 196 IINYIQSLQRQVEFLSM 212
I++Y++ L+ QV+ LSM
Sbjct: 174 ILDYVKFLRLQVKVLSM 190
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 176 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++ PKDV
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDV 180
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 239
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 190
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
MK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL +N +++
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDF 51
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 254
Query: 208 EFLSM 212
+ LSM
Sbjct: 255 KVLSM 259
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 247
Query: 208 EFLSM 212
+ LSM
Sbjct: 248 KVLSM 252
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LS+
Sbjct: 184 YVKFLRLQVKVLSI 197
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 47/80 (58%), Gaps = 32/80 (40%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAER--------------------------------ARR 166
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 167 EKISERMKILQDLVPGCNKV 186
EKISERMK+LQDLVPGCNKV
Sbjct: 330 EKISERMKLLQDLVPGCNKV 349
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
MK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 51
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVRFLQLQV 253
Query: 208 EFLSM 212
+ LSM
Sbjct: 254 KVLSM 258
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S +++S ++ N + N NG
Sbjct: 123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQI--------PCPSQNNRNG 174
Query: 117 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ + E + K +SS+ +E Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 175 KRKDFEKKVKSSTKKNKSSEENEK-LPYVHVRARRGQATDSHSLAERARREKINARMKLL 233
Query: 177 QDLVPGCNK 185
Q+LVPGC+K
Sbjct: 234 QELVPGCDK 242
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 186 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 303 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 340
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
MK LQDLVPGCN + GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 51
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 204
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK++ KA +LDEII+Y++ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 205 RQVE 208
QV+
Sbjct: 310 LQVK 313
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 78/137 (56%), Gaps = 18/137 (13%)
Query: 77 RDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK 136
R L+S + S +T + N+++G G N V A+ AAGN + K
Sbjct: 245 RHLNSGQQLSSFDATRNPEQSSNEASG------GGTGLNAPPFMVPANGAAGNG---APK 295
Query: 137 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
P VRARRGQATD HS+AER RREKIS+RMK LQ+LVP N+ KA +LDEI
Sbjct: 296 P--------RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEI 346
Query: 197 INYIQSLQRQVEFLSMK 213
I Y++ LQ QV+ S +
Sbjct: 347 IEYVKFLQLQVKVRSPR 363
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +L+EII YI+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKT-DKASMLEEIIEYIKFLQLQ 340
Query: 207 VEFLSM-KLEAVNSRMNL 223
+ LSM +L A ++ + L
Sbjct: 341 TKVLSMSRLGATDALVPL 358
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 44/46 (95%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNKV
Sbjct: 133 ENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 217
Query: 207 VE 208
V+
Sbjct: 218 VK 219
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 43/44 (97%)
Query: 142 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 185
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK
Sbjct: 149 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 308
Query: 207 VEFLSM 212
V LSM
Sbjct: 309 V--LSM 312
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 204
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK + KA +LDEII+Y++ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 205 RQVE 208
QV+
Sbjct: 298 LQVK 301
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 42/43 (97%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+KV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+Y
Sbjct: 112 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDY 168
Query: 200 IQSLQRQVEFLSMKLEAVNSR 220
++ LQ QV +S A SR
Sbjct: 169 VKFLQLQVLSMSRLGGAARSR 189
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+Y
Sbjct: 140 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDY 196
Query: 200 IQSLQRQVEFLSMKLEAVNSR 220
++ LQ QV +S A SR
Sbjct: 197 VKFLQLQVLSMSRLGGAARSR 217
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQLQVKVLS 227
Query: 212 M 212
M
Sbjct: 228 M 228
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 298
Query: 208 EFLSM 212
LSM
Sbjct: 299 --LSM 301
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMH 398
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMH 398
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 212 M 212
M
Sbjct: 323 M 323
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMH 398
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMH 398
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 376 IMSMGAGIYMPSMMLPPGMPHMH 398
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 212 M 212
M
Sbjct: 323 M 323
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
MK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL +++ ++
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLH 50
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 46/51 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 46/51 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 205 RQVEFLS---MKLEA 216
RQV+ LS ++LEA
Sbjct: 441 RQVQELSDTVVRLEA 455
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 46/51 (90%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%), Gaps = 6/58 (10%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 52
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 13 AANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGC 72
+++ ++ L +++PF GG A L + H E+S+L+ ++ + ++ C
Sbjct: 55 SSDHHAFLLPDMFPFGAMPGGNLPAMLDSWDQSHHLQETSSLKRKLLDVENLC-KTNSNC 113
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPA 132
R++L+ + ++ +S +N +++SN W+ G N S E + ++ K
Sbjct: 114 DVTRQELAKSKKKQRV---SSESNTVDESNTNWV--DGQSLSNSSDDEKASVTSVKGK-- 166
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +
Sbjct: 167 --------------TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTM 211
Query: 193 LDEIINYIQSLQRQVEFLS 211
L+E ++Y++ LQ Q++ LS
Sbjct: 212 LEEAVHYVKFLQLQIKLLS 230
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%), Gaps = 6/58 (10%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 52
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 519
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 520 IMSMGAGLYMPSMMLPPGVPHMH 542
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 511
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P + H
Sbjct: 512 IMSMGAGLYMPSMMLPPGMPHMH 534
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 81 SEDESSKIVSTTSSA--NDLNDSNGKWMKTSGSKNENGS-KAEVEASSAAGNKPAESSKP 137
SED+SS+IVST+ DL D K KT+ S N GS + EVE S + K + P
Sbjct: 55 SEDDSSRIVSTSGGGGGQDLTDLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIP 114
Query: 138 S-EPPK-DYIHVRARRGQATDSHSLAER 163
+ EPPK DYIHVRARRGQATDSHSLAER
Sbjct: 115 AAEPPKQDYIHVRARRGQATDSHSLAER 142
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
MK+LQ LVPGC+KV GKA +LDEIINY+QSLQ QVEFLSMKL +++ +
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVL 49
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 52/63 (82%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK + KA +L+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 210 LSM 212
+SM
Sbjct: 277 MSM 279
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 522
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM +M L ++ H
Sbjct: 523 MMSMGAGLYMPQMMLPAGMQHMH 545
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 207 VEFLS 211
VE LS
Sbjct: 399 VETLS 403
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 207 VEFLS 211
V+ LS
Sbjct: 393 VQTLS 397
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 362
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHPK 233
+SM V + P ++ + P+
Sbjct: 363 MMSMGCSMVPM---MYPGVQQYMPQ 384
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 13 AANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGC 72
+++ ++ L +++PF GG A L + H E+S+L+ ++ + ++ C
Sbjct: 55 SSDHHAFLLPDMFPFGAMPGGNLPAMLDSWDQSHHLQETSSLKRKLLDVENLC-KTNSNC 113
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPA 132
R++L+ + ++ +S +N +++SN W+ G N S E + ++ K
Sbjct: 114 DVTRQELAKSKKKQRV---SSESNTVDESNTNWV--DGQSLSNSSDDEKASVTSVKGK-- 166
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +
Sbjct: 167 --------------TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTM 211
Query: 193 LDEIINYIQSLQRQVE 208
L+E ++Y++ LQ Q++
Sbjct: 212 LEEAVHYVKFLQLQIK 227
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
ATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 324
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHPK 233
+SM V + P ++ + P+
Sbjct: 325 MMSMGCSMVPM---MYPGVQQYMPQ 346
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 205 RQVEFLS 211
R+V+ LS
Sbjct: 90 RKVQELS 96
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 438
Query: 209 FLSMKLEAVNSRMNLTPTIE 228
+SM M L P ++
Sbjct: 439 MMSMGSGLCIPPMLLPPAMQ 458
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 489
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 490 IMSMGAGLYMPPMMLPAGMQHMH 512
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Query: 146 HVR---ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
H R ++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKT 503
Query: 203 LQRQVEFLSM 212
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 425
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 426 IMSMGAGLYMPPMMLPAGMQHMH 448
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 501
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 502 IMSMGTGLCMPPMMLPTGMQHIH 524
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 207 VEFLS 211
VE LS
Sbjct: 397 VEALS 401
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 380
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 381 IMSMGTGLCMPPMMLPTGMQHIH 403
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 517 IMSMGTGLCMPPMMLPTGMQHIH 539
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 235
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L P ++
Sbjct: 236 MMSMGSGLCIPPMLLPPAMQHLQ 258
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 207 VEFLS 211
V+ LS
Sbjct: 390 VQTLS 394
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 209 FLSM 212
+SM
Sbjct: 517 IMSM 520
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 6/76 (7%)
Query: 165 RREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQRQVEF----LSMKL-EAVN 218
RREKISER+K+L+DLVP K VIGK L+L EIINYIQSLQ QVE S+ L E +N
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119
Query: 219 SRMNLTPTIEGFHPKD 234
+N+ +I+ F KD
Sbjct: 120 FILNMHSSIDCFPSKD 135
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 207 VEFLS 211
V+ LS
Sbjct: 400 VQTLS 404
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 119 AEVEASSAAGNKP-AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
A+ A++A N+P A S P + VRARRGQATD HS+AER RRE+I+ERMK LQ
Sbjct: 212 AQGAATTAVMNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 271
Query: 178 DLVPGCNKV 186
+LVP NKV
Sbjct: 272 ELVPNANKV 280
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 21 LAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLS 80
L +++PF GG A L + H E+ +L+ ++ + ++ C R++L+
Sbjct: 63 LPDMFPFGAMPGGNLPAMLDSWDQYHHLQETPSLKRKLLDVENLC-KTNSNCDVTRQELA 121
Query: 81 SEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEP 140
+ ++ + +N +++SN W+ G N S E + ++ K
Sbjct: 122 KSKKKQRV---SPESNTVDESNTNWI--DGQSLSNSSDDEKASVTSVKGK---------- 166
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y+
Sbjct: 167 ------TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYV 219
Query: 201 QSLQRQVEFLS 211
+ LQ Q++ LS
Sbjct: 220 KFLQLQIKLLS 230
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
Query: 103 GKWMKTSGSKNENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSL 160
GK + G+ E+GS +E VE SAA PA+ + A+R +A + H+L
Sbjct: 228 GKRKQRGGAAMESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVHNL 276
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 277 SERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 327
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
Query: 103 GKWMKTSGSKNENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSL 160
GK + G+ E+GS +E VE SAA PA+ + A+R +A + H+L
Sbjct: 228 GKRKQRGGAAMESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVHNL 276
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 277 SERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 327
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 209 FLSM 212
+SM
Sbjct: 339 MMSM 342
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 210 LSM 212
+SM
Sbjct: 269 MSM 271
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 210 LSM 212
+SM
Sbjct: 269 MSM 271
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 209 FLSM 212
+SM
Sbjct: 339 MMSM 342
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 209 FLSM 212
+SM
Sbjct: 398 IMSM 401
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 395
Query: 209 FLSM 212
+SM
Sbjct: 396 IMSM 399
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP +K + +LD + YI+ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 207 VEFLS 211
VE LS
Sbjct: 415 VETLS 419
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
+ E SA NKPA+ S + RR +A + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 12 DAELDSAVANKPAKRSGST-----------RRSRAAEVHNLSERRRRDRINEKMRALQEL 60
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 61 IPHCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 92
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 210 LSMKLEAVNSRMNLTPTIE 228
+SM M L P ++
Sbjct: 461 MSMGTGLCIPPMLLPPAMQ 479
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 347
Query: 209 FLSM 212
+SM
Sbjct: 348 VMSM 351
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 320
Query: 209 FLSM 212
+ M
Sbjct: 321 MMWM 324
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 318
Query: 210 LSM 212
+SM
Sbjct: 319 MSM 321
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 133 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
E+S+ ++P + Y RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +
Sbjct: 306 EASEETKPSRRY--GTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASI 362
Query: 193 LDEIINYIQSLQRQVEFLSM 212
LDE I Y++SLQ QV+ + M
Sbjct: 363 LDETIEYLKSLQMQVQIMWM 382
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I+Y++SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAISYLKSLQLQVQM 363
Query: 210 LSMKLEAVNSRMNLTPTIEGFHP 232
+SM V + P I+ + P
Sbjct: 364 MSMGCGMVPV---MFPGIQQYMP 383
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 286
Query: 210 LSM 212
+ M
Sbjct: 287 MWM 289
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 130 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+P ++ PS PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 104 QPMPTTVPSAPHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 162
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
+A++LDEI++Y++ L+ QV+ LSM
Sbjct: 163 DRAVMLDEIVDYVKFLRLQVKVLSM 187
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDETIEYLKSLQM 281
Query: 206 QVEFLSM 212
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 209 FLSM 212
+SM
Sbjct: 398 IMSM 401
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 210 LSM 212
+SM
Sbjct: 368 MSM 370
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 275
Query: 210 LSM 212
+ M
Sbjct: 276 MWM 278
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 330
Query: 209 FLSM 212
+SM
Sbjct: 331 MMSM 334
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I
Sbjct: 321 KPPQKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIE 377
Query: 199 YIQSLQRQVEFLSM 212
Y++SLQ QV+ + M
Sbjct: 378 YLKSLQLQVQMMWM 391
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I
Sbjct: 321 KPPQKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIE 377
Query: 199 YIQSLQRQVEFLSM 212
Y++SLQ QV+ + M
Sbjct: 378 YLKSLQLQVQMMWM 391
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 375
Query: 210 LSM 212
+ M
Sbjct: 376 MWM 378
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 391
Query: 210 LSM 212
+ M
Sbjct: 392 MWM 394
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 210 LSM 212
+SM
Sbjct: 440 MSM 442
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 382
Query: 209 FLSM 212
+ M
Sbjct: 383 MMWM 386
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 207 VEFLS 211
+ LS
Sbjct: 404 FKALS 408
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I
Sbjct: 303 KPPQKL--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIE 359
Query: 199 YIQSLQRQVEFLSM 212
Y+++LQ QV+ + M
Sbjct: 360 YLKTLQMQVQMMWM 373
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 210 LSM 212
+SM
Sbjct: 496 MSM 498
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
P + + PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A
Sbjct: 122 PTTVTAATHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRA 180
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 181 AMLDEIVDYVKFLRLQVKILSM 202
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 212 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 265
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDE I Y++SLQ QV+ + M
Sbjct: 266 ILDEAIEYLKSLQMQVQIMWM 286
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 213 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 266
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDE I Y++SLQ QV+ + M
Sbjct: 267 ILDEAIEYLKSLQMQVQIMWM 287
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 209 FLSM 212
+SM
Sbjct: 360 MMSM 363
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 209 FLSM 212
+SM
Sbjct: 356 MMSM 359
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 90
Query: 209 FLSM 212
+ M
Sbjct: 91 MMWM 94
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 210 LSM 212
+SM
Sbjct: 508 MSM 510
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
+S+ K E+SKP PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P
Sbjct: 100 TSSHVEKSVEASKPVPPPRS----SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNS 155
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFL 210
NK KA +LDE I Y++ LQ QV++L
Sbjct: 156 NKT-DKASMLDEAIEYLKQLQLQVQYL 181
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 209 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 262
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDE I Y++SLQ QV+ + M
Sbjct: 263 ILDEAIEYLKSLQMQVQIMWM 283
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 312 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKT-DKASMLDEAIEYLKTLQLQVQ 370
Query: 209 FLSM 212
+SM
Sbjct: 371 MMSM 374
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 421
Query: 209 FLSMKLEAV 217
+SM V
Sbjct: 422 MMSMGCSMV 430
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 303
Query: 210 LSM 212
+ M
Sbjct: 304 MWM 306
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 14/114 (12%)
Query: 101 SNGKWMKTSGSKNENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSH 158
+ GK + + E+GS +E VE SAA PA+ + A+R +A + H
Sbjct: 235 AGGKRKQRGAAAMESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVH 283
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 284 NLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 336
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 312 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 365
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDE I Y++SLQ QV+ + M
Sbjct: 366 ILDEAIEYLKSLQMQVQIMWM 386
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 132 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 388 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 441
Query: 192 VLDEIINYIQSLQRQVEFLSM 212
+LDE I Y++SLQ QV+ + M
Sbjct: 442 ILDEAIEYLKSLQMQVQIMWM 462
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 415
Query: 210 LSM 212
+SM
Sbjct: 416 MSM 418
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 209 FLSM 212
+ M
Sbjct: 373 MMWM 376
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 7/121 (5%)
Query: 98 LNDSNGKWMK----TSGSKNENGSKAEVEASSAAGNKPAESSKPS--EPPKDYIHVRARR 151
L G++MK ++ K + A +P ++ P+ PP VRARR
Sbjct: 75 LEQGKGRFMKPDEASASGKRFRDDVVDNRAKHVFHGQPMPTTMPAAPHPPAIRPRVRARR 134
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV+ LS
Sbjct: 135 GQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLS 193
Query: 212 M 212
M
Sbjct: 194 M 194
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RARRG AT S+AER RR +ISERMK LQDLVP +K A +LDE + Y++ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 208 EFLS 211
+ LS
Sbjct: 76 KDLS 79
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 210 LSMKLEAVNSRMNL-------TPTIEGFH 231
++M M L P+I FH
Sbjct: 408 MAMGSGLCIPPMLLPRAMQLQIPSIAHFH 436
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA RG AT S+AER RR KISERMK LQDLVP ++ A +LD+ + Y++ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 207 VEFLS 211
V+ LS
Sbjct: 123 VQELS 127
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 130 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+P ++ P+ +PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 104 QPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 162
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 163 DRAAMLDEIVDYVKFLRLQVKVLSM 187
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 130 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+P ++ P+ +PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 101 QPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 159
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 160 DRAAMLDEIVDYVKFLRLQVKVLSM 184
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 209 FLSM 212
+ M
Sbjct: 373 MMWM 376
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 130 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+P ++ P+ PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 111 QPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 169
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 170 DRAAMLDEIVDYVKFLRLQVKVLSM 194
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ +RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 205 RQVEFL 210
+Q + L
Sbjct: 390 KQAQKL 395
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 207 VEFLS 211
+ LS
Sbjct: 342 FKTLS 346
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 353
Query: 209 FLSM 212
+ M
Sbjct: 354 MMWM 357
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
AE++ S AGN P + S + RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 163 AELDLDSMAGNNPTKRSGST-----------RRSRAAEVHNLSERRRRDRINEKMRALQE 211
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM----------KLEAVNSRMNLTPTI 227
L+P C K KA +LDE I Y++SLQ Q++ + M ++ SRM + P +
Sbjct: 212 LIPHCYKT-DKASMLDEAIEYLKSLQLQLQVMWMGGGMAPMLFPGVQHFMSRMGMGPPL 269
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 130 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+P ++ P+ PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 116 QPMSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 174
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 175 DRAAMLDEIVDYVKFLRLQVKVLSM 199
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQR 205
VRA+RG AT S+AER RR +ISERM+ LQ+LVP +K + A +LDE + Y++SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 206 QVEFLS 211
QV+ L+
Sbjct: 528 QVQELA 533
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 210 LSMKLEAVNSRMNL-------TPTIEGFH 231
++M M L P+I FH
Sbjct: 218 MAMGSGLCIPPMLLPRAMQLQIPSIAHFH 246
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 131 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 190
P + PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A
Sbjct: 121 PTTMAAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRA 179
Query: 191 LVLDEIINYIQSLQRQVEFLSM 212
+LDEI++Y++ L+ QV+ LSM
Sbjct: 180 AMLDEIVDYVKFLRLQVKVLSM 201
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 207 VEFLS 211
V+ LS
Sbjct: 279 VKTLS 283
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 429
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 430 MMSMGTRLCMPLMMLPTGMQHIH 452
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R + + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 209 FLSM 212
+SM
Sbjct: 316 MMSM 319
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 207 VEFLS 211
V+ LS
Sbjct: 419 VQTLS 423
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 207 VEFLS 211
V+ LS
Sbjct: 419 VQTLS 423
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 435
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM M L ++ H
Sbjct: 436 MMSMGTRLCMPLMMLPTGMQHIH 458
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ RA+RG AT S+AER RR +ISERMK LQDLVP K + +LDE + Y++SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 205 RQVEFLSMKLEAVNSRMNLTP 225
+V+ L+ + + + ++P
Sbjct: 61 MKVKELTETIAQLKAATQMSP 81
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 209 FLSM 212
+SM
Sbjct: 390 MMSM 393
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 390
Query: 210 LSM 212
+SM
Sbjct: 391 MSM 393
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 207 VEFL 210
+ L
Sbjct: 345 YKIL 348
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 209 FLSMKLEA 216
+S+ L A
Sbjct: 247 AMSVGLAA 254
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RARRG ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 208 EFL 210
L
Sbjct: 502 TLL 504
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 106 MKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 165
M+TS ++ GNK ++ P+ P + R+ G+A H L E+ R
Sbjct: 129 METSTETDKKEKVPTTTEGVVMGNKVMKNKAPAGGPSSW---RSHHGEA---HKLTEKRR 182
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
R KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ+QV+ +S+ L A
Sbjct: 183 RHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQQQVQAMSVGLAA 232
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 140 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y
Sbjct: 120 PPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 178
Query: 200 IQSLQRQVEFLSM 212
++ L+ QV+ LSM
Sbjct: 179 VKFLRLQVKVLSM 191
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 209 FLSM 212
+SM
Sbjct: 174 MMSM 177
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+ +ER RR++I+E+MK LQ+LVP CNK KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKS-DKASILDEAIEYLKSLQLQVQI 198
Query: 210 LSM 212
+ M
Sbjct: 199 MWM 201
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 210 LS 211
+S
Sbjct: 380 MS 381
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 210 LS 211
+S
Sbjct: 380 MS 381
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++
Sbjct: 146 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVD 204
Query: 199 YIQSLQRQVEFLSM 212
Y++ L+ QV+ LSM
Sbjct: 205 YVKFLRLQVKVLSM 218
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
+++ S G +P+E P + +R +A + H+L+E+ RR +I+E+MK LQ+L
Sbjct: 155 DLDCESEEGQEPSEEMSKPAPSRS----STKRSRAAEVHNLSEKRRRSRINEKMKALQNL 210
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 225
+P NK KA +LDE I Y++ LQ QV+ LSMK S +NL P
Sbjct: 211 IPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMK-----SGINLAP 250
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 207 VEFLSMK 213
+ LS K
Sbjct: 360 FKTLSEK 366
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 207 VEFL 210
V+ L
Sbjct: 363 VKTL 366
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 207 VEFL 210
V+ L
Sbjct: 410 VKTL 413
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 210 LS 211
+S
Sbjct: 384 MS 385
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 207 VEFL 210
V+ L
Sbjct: 364 VKAL 367
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 207 VEFLSMK 213
+ LS K
Sbjct: 354 FKTLSEK 360
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SLQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 210 LS 211
+S
Sbjct: 1198 MS 1199
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K LD I Y++ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 210 LSMKLEAVNSRMN 222
+ M + S MN
Sbjct: 194 ILMGQGMMPSMMN 206
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 210 LSMKL 214
M
Sbjct: 1628 YVMNF 1632
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+LAER RREKI+E +K LQ+L+P CNK K LD+ I Y++ LQ Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQM 639
Query: 210 LS 211
+S
Sbjct: 640 MS 641
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 209 FLSM 212
+SM
Sbjct: 269 MMSM 272
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 257
Query: 206 QVEFLSM 212
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 210 LS 211
+S
Sbjct: 325 MS 326
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 207 VEFL 210
+ L
Sbjct: 339 YKIL 342
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 34/39 (87%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 185
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+PA S+ P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 129 QQPAPSA-PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-D 186
Query: 189 KALVLDEIINYIQSLQRQVEFLSM 212
+A ++DEI++Y++ L+ QV+ LSM
Sbjct: 187 RAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 207 VEFL 210
+ L
Sbjct: 339 YKIL 342
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 129 NKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 188
+PA S+ P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 129 QQPAPSA-PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-D 186
Query: 189 KALVLDEIINYIQSLQRQVEFLSM 212
+A ++DEI++Y++ L+ QV+ LSM
Sbjct: 187 RAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV K+ +L+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKSSMLEEAIEYLKTLQLQVQ 376
Query: 209 FLSM 212
+SM
Sbjct: 377 MMSM 380
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 105 WMKTSGSKNENGSKAE-----VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHS 159
W K + NG +AE ++ S + N + + RA RG ATD S
Sbjct: 217 WSKKNQKHTSNGEEAEETNTGLDGQSCSSNMSEDDNTSKSALNSNGKTRASRGSATDPQS 276
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
L R RRE+I+ER++ILQ+LVP KV + +L+E +NY++ LQ Q++ LS
Sbjct: 277 LYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQIKLLS 327
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 207 VEFLS 211
+ L+
Sbjct: 360 YKILN 364
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 286
Query: 206 QVEFLSM 212
Q++ + M
Sbjct: 287 QLQIMWM 293
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 207 VEFLS 211
+ LS
Sbjct: 331 YKTLS 335
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 248
Query: 206 QVEFLSM 212
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 207 VEFL 210
V+ L
Sbjct: 385 VKVL 388
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 208 EFLS 211
+ LS
Sbjct: 93 QTLS 96
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 207 VEFL 210
V+ L
Sbjct: 352 VKVL 355
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQLQLQ 72
Query: 209 FLSM 212
L M
Sbjct: 73 MLVM 76
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 207 VEFL 210
V+ L
Sbjct: 345 VKVL 348
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 195 EIINYIQSLQRQVEFLSM 212
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++YI+ LQ
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 217
Query: 205 RQVEFL 210
+QV+ L
Sbjct: 218 KQVKVL 223
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 195 EIINYIQSLQRQVEFLSM 212
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 195 EIINYIQSLQRQVEFLSM 212
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA RG AT S+AER RR KISERMK LQ+LVP ++ A +LD+ + Y++ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 207 VEFLS---MKLEAVNSRM 221
V+ L+ +L+ + R+
Sbjct: 439 VQELTNTVAELQLLQERL 456
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQ 227
Query: 205 RQVEFLS 211
RQ++ L+
Sbjct: 228 RQIQELT 234
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 105 WMKTSGSKNENGSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSH 158
W+ + + GS+ E + +AGNK ES++PS+ P + +A+ T D
Sbjct: 145 WLYSDSTVVTTGSRHESMSPKSAGNKRSQTGESTQPSKKPNSGVTGKAKPKPTTSPKDPQ 204
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
SLA + RRE+ISER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 205 SLAAKNRRERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 256
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 207 VE 208
V+
Sbjct: 422 VK 423
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKT-DKASMLDEAIEYLKSLQLQLQ 291
Query: 209 FLSMKLEAVNSRMNLTPTI 227
+ A+ RM P +
Sbjct: 292 VMW----AMGGRMAPAPVM 306
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKA-DKASMLDEAIEYLKSLQLQLQ 305
Query: 209 FLSM 212
+ M
Sbjct: 306 VVWM 309
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTS-----SANDLNDSNGKWMKTSGSKN 113
+E ST+ + S G + DE S V ++ S++ + + + K
Sbjct: 129 VESSTLIDVSAKGPKNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKR 188
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRAR-----RGQATDSHSLAERARREK 168
+ G E E++ + N ES + K +H R R R ++T+ H L ER RR++
Sbjct: 189 KYGDIEEEESTYLSNNSDDES----DDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDE 244
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+++M+ LQDL+P C K KA +LDE I Y+++LQ QV+ +SM
Sbjct: 245 FNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 71 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 129
Query: 195 EIINYIQSLQRQVEFLSM 212
EI++Y++ L+ QV+ LSM
Sbjct: 130 EIVDYVKFLRLQVKVLSM 147
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHP 232
+SM V + P I+ + P
Sbjct: 313 MMSMGCGMVPM---MFPGIQQYMP 333
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI---HVRARRGQATDSH 158
NG M S ++ E + G SSK +P K RA RG ATD
Sbjct: 218 NGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQ 277
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 278 SLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 329
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTS-----SANDLNDSNGKWMKTSGSKN 113
+E ST+ + S G + DE S V ++ S++ + + + K
Sbjct: 129 VESSTLIDVSAKGPKNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKR 188
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRAR-----RGQATDSHSLAERARREK 168
+ G E E++ + N ES + K +H R R R ++T+ H L ER RR++
Sbjct: 189 KYGDIEEEESTYLSNNSDDES----DDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDE 244
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+++M+ LQDL+P C K KA +LDE I Y+++LQ QV+ +SM
Sbjct: 245 FNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPK 142
D ++ IV +T+ + NG + + S S + AA K + + S P K
Sbjct: 272 DNTNTIVFSTTPNKRAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCK 331
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+
Sbjct: 332 ----VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKG 387
Query: 203 LQRQVEFLSMKLE 215
LQ +V+ L+ +LE
Sbjct: 388 LQNEVQKLNKELE 400
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 93 SSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVR--AR 150
SS+ + +D G + K S + + ++ S K AE + E P + + R ++
Sbjct: 66 SSSLNYSDQGGYFAKESAERRGVSMENDLGDLSCDSEKGAEVA---EVPSETVRPRNSSK 122
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ L
Sbjct: 123 RSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQML 181
Query: 211 SMK 213
+M+
Sbjct: 182 TMR 184
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 15/150 (10%)
Query: 74 RKRRDLSSEDESSK-IVSTTSSANDLNDSNGKWMKTSGSKNENGSK--AEVEASSAAGNK 130
+++ D+ +ED+ +K + A L D G T KN+ + E E ++A +
Sbjct: 178 KRKLDVPAEDKMNKGSENQKKRARALKDGQGCMKNTWSKKNQKHASNGEEAEETNAGSDG 237
Query: 131 PAESSKPSEPPKDYI---------HVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
+ SS SE D I RA RG ATD SL R RRE+I+ER++ILQ+LVP
Sbjct: 238 QSSSSNMSE--DDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVP 295
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
KV + +L+E +NY++ LQ Q++ LS
Sbjct: 296 NGTKV-DISTMLEEAVNYVKFLQLQIKLLS 324
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 207 VEFL 210
V+ L
Sbjct: 379 VKVL 382
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E ++Y++ LQRQ
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 207 VEFLS 211
++ L+
Sbjct: 248 IQELT 252
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RG ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 208 EFL 210
E L
Sbjct: 502 ELL 504
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 207 VEFL 210
V+ L
Sbjct: 357 VKAL 360
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 207 VEFL 210
V+ L
Sbjct: 357 VKAL 360
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI---HVRARRGQATDSH 158
NG M S ++ E + G SSK +P K RA RG ATD
Sbjct: 218 NGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQ 277
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 278 SLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 329
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYI---HVRARRGQATDSH 158
NG M S ++ E + G SSK +P K RA RG ATD
Sbjct: 215 NGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQ 274
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 275 SLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 326
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 207 VEFLSMK 213
+ LS K
Sbjct: 363 FKTLSDK 369
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 9/98 (9%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRAR-----RGQATDSHSLAERARREKISERMK 174
E E S+ N P + S + K +H R R R ++T+ H L ER RR++ +++M+
Sbjct: 191 EEEESTYLSNNPDDESDDA---KTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMR 247
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
LQD++P C K KA +LDE + Y+++LQ QV+ +SM
Sbjct: 248 ALQDILPNCYK-DDKASLLDEAVKYMRTLQHQVQMMSM 284
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 207 VEFLSMKLEAVNSRMNLT 224
V+ L+ +SR N T
Sbjct: 382 VKGLN------DSRANCT 393
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPK 142
D ++ IV +T+ + NG + + S S + AA K + + S P K
Sbjct: 219 DNTNTIVFSTTPNKRAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCK 278
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+
Sbjct: 279 ----VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKG 334
Query: 203 LQRQVEFLSMKLE 215
LQ +V+ L+ +LE
Sbjct: 335 LQNEVQKLNKELE 347
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 94 SANDLNDSNGKWMKTSGSKN----ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
SA+ ND + + + +N ++ S A +E + A PA PP + RA
Sbjct: 214 SASVSNDEDDRSLSLQAQRNSCFSQSDSNAYLEPNGGASKDPA-------PPNLHRKSRA 266
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
G ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q++
Sbjct: 267 TTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKL 325
Query: 210 LS 211
LS
Sbjct: 326 LS 327
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 207 VEFL 210
V+ L
Sbjct: 378 VKVL 381
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R +R + + H+L+E+ RREKI+++M+ L+DL+P CNKV KA +LD+ I+Y+++L+ Q
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQ- 388
Query: 208 EFLSMKLEAVNSRMNLTPTIEGFHPKDVSL 237
L + ++ L P + GF P + +
Sbjct: 389 --LQANFQIMSMGSGLWPLMMGFRPPQLPI 416
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 41/206 (19%)
Query: 39 LRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTS--SAN 96
LR G MG GF R+G+ + + SG G GR + LS ++S S +
Sbjct: 172 LRQG-MGVGF------RNGATNAAAAVDSSGSGGGRLKGQLSFSSRQGSLMSQISEMGSE 224
Query: 97 DLNDSNGK-----------------WMKTS-GSKNENGSKAEVEASSAAGNK-------P 131
DL S+ + W ++S S+N +G K ++S A N P
Sbjct: 225 DLGGSSPEGAGGSRGYIPGYPMSSGWEESSLMSENMSGMKRPRDSSEPAQNGLAHQFSLP 284
Query: 132 AESSKPSEPPK-----DYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
SS+ + K D + +RA+RG AT S+AER RR +ISER++ LQ+LVP +
Sbjct: 285 KTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMD 344
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFL 210
K A +LD ++YI+ LQ QV+ +
Sbjct: 345 KQTNTADMLDLAVDYIKELQEQVKVI 370
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 122 EASSAAGNKPAESSKPSEPPK----DYIHVRARRGQATDSHSLAERARREKISERMKILQ 177
E + G+ A S+P PP+ +R +A + H+L+E+ RR KI+E+MK LQ
Sbjct: 70 EDAGGLGDSDAGGSEPEPPPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSKINEKMKALQ 129
Query: 178 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 130 SLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 164
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 207 VEFL 210
V+ L
Sbjct: 393 VKTL 396
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 80
Query: 209 FLSMK 213
LSM+
Sbjct: 81 MLSMR 85
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 124 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 183
S A G+ E S+ P+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 133 SEAGGSSEPEPHGTSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 192
Query: 184 NKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 193 NKT-DKASMLDEAIEYLKQLQLQVQMLSMR 221
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 207 VEFL 210
V+ L
Sbjct: 357 VKVL 360
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 205 RQVEFLS 211
RQ++ L+
Sbjct: 244 RQIQELT 250
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 205 RQVEFLS 211
RQ++ L+
Sbjct: 242 RQIQELT 248
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+ G+A H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQV 217
Query: 208 EFLSMKL 214
+ +S+ L
Sbjct: 218 QAMSVGL 224
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 119 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 178
E E A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ
Sbjct: 20 CESEVQDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQT 72
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
L+P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 LIPNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 106
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT SLAER RR +ISERM+ LQ++VP +K + +LD + YI+ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 207 VEFLSMKLEAVNSR 220
++ +S K R
Sbjct: 303 LKTMSAKRAKCRCR 316
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 207 VEFLSMKLEAVNSRMNLT 224
V+ L+ +SR N T
Sbjct: 378 VKGLN------DSRANCT 389
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 207 VEFLS 211
L+
Sbjct: 381 YNTLT 385
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 10/99 (10%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R RR + H+L+E+ RREKI+++M+ L++L+P CNKV KA +LD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 208 EFLS--------MKLEAVNSRMNLTPTI-EGFHPKDVSL 237
+ +S M L A + ++ P + GF P + +
Sbjct: 380 QIMSMGNGLWPLMMLPAATTAHHMNPQLGMGFRPPQLPI 418
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 207 VEFLS 211
+E LS
Sbjct: 178 IEELS 182
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 368
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR +A H+ +ER RR++I+E+MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 315
Query: 209 FLSMK 213
F+S++
Sbjct: 316 FMSVR 320
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 209 FLSMK 213
LSM+
Sbjct: 229 MLSMR 233
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 207 VEFL 210
V+ L
Sbjct: 377 VKAL 380
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 207 VEFLS 211
+ LS
Sbjct: 331 YKTLS 335
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQLQLQ 72
Query: 209 FLSM 212
L M
Sbjct: 73 MLVM 76
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 207 VEFLS 211
L+
Sbjct: 370 YNTLT 374
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 207 VEFLS 211
+E LS
Sbjct: 141 IEELS 145
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 207 VEFL 210
V+ L
Sbjct: 254 VKAL 257
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + YI+ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 207 VEFLS 211
V+ LS
Sbjct: 426 VKILS 430
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 335
Query: 207 VEFLSMKLEAVNSRMNLTPTI 227
V+ + SRMN+ P +
Sbjct: 336 VQMM--------SRMNIQPVM 348
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 209 FLSMK 213
LSM+
Sbjct: 229 MLSMR 233
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 437
Query: 209 FLSM 212
+SM
Sbjct: 438 VMSM 441
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 207 VEFLSMKLEAVNSRMNLT 224
V+ ++ SR N T
Sbjct: 360 VKVIN------ESRANCT 371
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+ Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 207 VEFL 210
VE L
Sbjct: 340 VEKL 343
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 230
Query: 209 FLS 211
+S
Sbjct: 231 AMS 233
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 110 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 169
S+NE + + E+ E + PP+ ++R +A + H+L+E+ RR +I
Sbjct: 122 ASENETDHECDCESEEGLEALIEEVQTKAAPPRS----SSKRSRAAEVHNLSEKRRRSRI 177
Query: 170 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LS++
Sbjct: 178 NEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLR 220
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 208 EFLS 211
+ L+
Sbjct: 418 KVLT 421
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE- 208
+R + + H+LAER RREKI+E+MK LQ L+P CNK K LD+ I Y++SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 209 FLSMKLEAVNSR 220
+S + A N++
Sbjct: 311 MMSPMMNAGNTQ 322
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 207 VEFLSMKLEAVNSRMNLT 224
V+ L+ +SR N T
Sbjct: 129 VKGLN------DSRANCT 140
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 131 PAESSKPSEPPKDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV-- 186
P++ S PK + +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK+
Sbjct: 34 PSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSS 93
Query: 187 -----IGKALVLDEIINYIQSLQRQVEFLSM 212
KA +LDE I Y+++LQ QV+ +
Sbjct: 94 FTDSQTDKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 114 ENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 172
ENG S ++ + S+ + +++ S PK RA RG ATD SL R RRE+I+ER
Sbjct: 207 ENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINER 262
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
++ILQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 263 LRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 114 ENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 172
ENG S ++ + S+ + +++ S PK RA RG ATD SL R RRE+I+ER
Sbjct: 207 ENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINER 262
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
++ILQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 263 LRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 207 VEFLS 211
L+
Sbjct: 256 YNTLT 260
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 207 VEFL 210
V+ L
Sbjct: 231 VKTL 234
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 206
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 115 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 174
NGS A S N ES+ PK RA RG +TD SL R RRE+I+ER+K
Sbjct: 185 NGSTASCCTSDDDSNASQESADTGVCPKG--KARAARGASTDPQSLYARKRRERINERLK 242
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
LQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 243 TLQTLVPNGTKV-DMSTMLEEAVHYVKFLQLQIKVLS 278
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 207 VE 208
V+
Sbjct: 348 VK 349
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 207 VEFL 210
V+ L
Sbjct: 416 VKML 419
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 22 ESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIP 74
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 75 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 105
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 207 VEFL 210
V+ L
Sbjct: 420 VKIL 423
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 121 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 20 CESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLI 72
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 PNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 121 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 20 CESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLI 72
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 PNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y+ LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQ 330
Query: 207 VEFLS 211
++ LS
Sbjct: 331 IKLLS 335
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 207 VEFLS 211
+ LS
Sbjct: 90 YKTLS 94
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 318
Query: 208 EFLS 211
+ LS
Sbjct: 319 KLLS 322
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 323
Query: 207 VEFLS 211
++ LS
Sbjct: 324 IKLLS 328
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + +I+ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 207 VEFLS 211
V+ LS
Sbjct: 421 VQILS 425
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 256 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 314
Query: 208 EFLS 211
+ LS
Sbjct: 315 KLLS 318
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 255 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 313
Query: 208 EFLS 211
+ LS
Sbjct: 314 KLLS 317
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 207 VEFLS 211
++ LS
Sbjct: 246 IKLLS 250
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV-E 208
+R +A + H+LAER RREKI+ERMK LQ L+P CNK K +L+++I Y++SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 209 FL 210
F+
Sbjct: 206 FM 207
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 58
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 193
Query: 209 FLSMK 213
LSM+
Sbjct: 194 MLSMR 198
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 233
Query: 209 FLS 211
+S
Sbjct: 234 AMS 236
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Query: 134 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
SSK + PP+ ++R +A + H+L+E+ RR KI+E++K LQ+L+P NK KA +L
Sbjct: 76 SSKAAPPPRS----SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKT-DKASML 130
Query: 194 DEIINYIQSLQRQVEFLSMK 213
DE I Y++ LQ QV+ L ++
Sbjct: 131 DEAIEYLKQLQLQVQMLMVR 150
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 698
Query: 208 EFL 210
+ L
Sbjct: 699 KML 701
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 29 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 82
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 83 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 29 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 82
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 83 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 207 VEFLS 211
++ LS
Sbjct: 246 IKLLS 250
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 7 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 60
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 61 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 91
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 148 RARRG-QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A LD+ I Y++SLQ+
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 207 VEFLSM 212
V+ +S+
Sbjct: 172 VQAMSV 177
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRG AT S+AER RR +IS+R+K LQDLVP +K + +LD + YI+ L+ Q
Sbjct: 152 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELKDQ 211
Query: 207 VEFL 210
VE L
Sbjct: 212 VEKL 215
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 207 VEFLS 211
++ LS
Sbjct: 346 IKLLS 350
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 197
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS R+K LQDLVP +K A +LD +
Sbjct: 291 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQ 350
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPT 226
+I+ LQ +V+ L +LE N PT
Sbjct: 351 HIKGLQGEVQKLHKELE--NCTCGCKPT 376
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
+RA+RG AT S+AER RR +ISER+K LQ+L P +K A +L+ + YI+ LQR
Sbjct: 341 QIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQR 400
Query: 206 QVEFLS 211
QV+ L+
Sbjct: 401 QVKTLT 406
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQ 74
Query: 209 FLSM 212
L M
Sbjct: 75 MLVM 78
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 207 VEFLS 211
++ LS
Sbjct: 346 IKLLS 350
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 70 GGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGN 129
G + +R+ SS+ S+ V++TS+ ++ +++ +SG +E+ S A E + A +
Sbjct: 191 GDAQKNKRNASSK--KSQKVASTSNNDEGSNAGLNGPASSGCCSEDESNASHELNRGASS 248
Query: 130 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
+ SSK + RA RG ATD SL R RRE+I+ER++ILQ LVP KV
Sbjct: 249 --SLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKV-DI 305
Query: 190 ALVLDEIINYIQSLQRQVEFLS 211
+ +L+E + Y++ LQ Q++ LS
Sbjct: 306 STMLEEAVQYVKFLQLQIKLLS 327
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 68
Query: 209 FLSM 212
+SM
Sbjct: 69 VMSM 72
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 240
Query: 205 RQVEFLS 211
+Q++ L+
Sbjct: 241 KQIQELT 247
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 113 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 172
+E G +E EA AAG +P S ++R +A + H+L+E+ RR KI+E+
Sbjct: 77 SEAGGSSEPEA--AAGARPRGGSG------------SKRSRAAEVHNLSEKRRRSKINEK 122
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
MK LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 123 MKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 162
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + +I+ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 207 VEFLS 211
V+ L+
Sbjct: 397 VKTLT 401
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++YI+ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 207 VEFL 210
+E L
Sbjct: 360 IEKL 363
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 207 VEFL 210
V+ +
Sbjct: 387 VKVM 390
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLELQI 813
Query: 208 EFL 210
+ L
Sbjct: 814 KML 816
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 113 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 172
+E G +E EA AAG +P S ++R +A + H+L+E+ RR KI+E+
Sbjct: 77 SEAGGSSEPEA--AAGARPRGGSG------------SKRSRAAEVHNLSEKRRRSKINEK 122
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
MK LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 123 MKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 162
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 212
Query: 209 FLSMK 213
LSM+
Sbjct: 213 MLSMR 217
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ+Q
Sbjct: 84 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQ 143
Query: 207 VEFL 210
+E L
Sbjct: 144 IEEL 147
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 160
Query: 209 FLSMK 213
LSM+
Sbjct: 161 MLSMR 165
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
A KP S PS +R +A + H+L+E+ RR +I+E+MK LQ+L+P NK
Sbjct: 131 APAKPTTSRNPS-----------KRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT 179
Query: 187 IGKALVLDEIINYIQSLQRQVEFLSMK 213
KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 180 -DKASMLDEAIEYLKQLQLQVQMLTMR 205
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+ RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 208 EFLS 211
+ LS
Sbjct: 284 KLLS 287
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+ RG ATD S+ R RREKI+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 305
Query: 208 EFLS 211
+ LS
Sbjct: 306 KLLS 309
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++YI+ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 207 VEFL 210
+E L
Sbjct: 355 IEKL 358
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 70 GGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMK--TSGSKNENGSKAEVEASSAA 127
G + +R++ S+ +S K+ ST N+ +SNG +SG +E+ S A E + A
Sbjct: 151 GDAQKNKRNVRSK-KSQKVAST---GNNDEESNGGLNGPVSSGCCSEDESNASQELNGGA 206
Query: 128 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
+ + SSK + RA +G ATD SL R RRE+I+ER++ILQ+LVP KV
Sbjct: 207 SS--SLSSKGTTTLNSSGKTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKV- 263
Query: 188 GKALVLDEIINYIQSLQRQVEFLS 211
+ +L+E + Y++ LQ Q++ LS
Sbjct: 264 DISTMLEEAVQYVKFLQLQIKLLS 287
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 207 VEFL 210
V+ +
Sbjct: 384 VKVM 387
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 43/176 (24%)
Query: 38 GLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND 97
G+++ + G ESS D + S + S KRR LSSE ND
Sbjct: 123 GVKLSDPGDFLKESS---DNAFSSSGAVD-SDTNAPLKRRGLSSE-------------ND 165
Query: 98 LNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDS 157
L D + +E G EV +S+ N P SSK R ++ +
Sbjct: 166 LGDFS--------CDSEGGDLPEVPSST---NLPRNSSK--------------RSRSAEV 200
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 85 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 144
Query: 199 YIQSLQRQVEFL 210
YI+ LQ QVE L
Sbjct: 145 YIKELQGQVEKL 156
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 881
Query: 208 EFL 210
+ L
Sbjct: 882 KML 884
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ RA+RG AT S+AER RR +ISERMK LQDLVP K A +LDE + Y++SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 205 RQVEFL 210
+V L
Sbjct: 63 VKVSEL 68
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQM 75
Query: 210 LSM 212
L M
Sbjct: 76 LVM 78
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +L+ +
Sbjct: 255 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVK 314
Query: 199 YIQSLQRQVEFLSMKLEAVN 218
+I+ LQ +VE L +LE
Sbjct: 315 HIKGLQNEVEKLHKELEGCT 334
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 152
Query: 208 EFLS 211
+ LS
Sbjct: 153 KLLS 156
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD S+ R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 265
Query: 207 VEFLS 211
++ LS
Sbjct: 266 IKLLS 270
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 199 YIQSLQRQVEFL 210
YI+ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 199 YIQSLQRQVEFL 210
YI+ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 209 FLSM 212
SM
Sbjct: 332 MFSM 335
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 207 VEFLS 211
++ L+
Sbjct: 241 IQELT 245
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R +R +A + H+L+E+ RR KI+E+MK LQ LVP +K KA +LD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKT-DKASMLDDAIEYLKHLQLQV 103
Query: 208 EFLSMK 213
+ LSM+
Sbjct: 104 QMLSMR 109
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 200 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 259
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ QV+ L ++E
Sbjct: 260 HIKGLQTQVQKLHKEME 276
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 207
Query: 199 YIQSLQRQVEFL 210
YI+ LQ QVE L
Sbjct: 208 YIKELQGQVEKL 219
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDL--VPGCNKVIGKALVLDEIINYIQSLQRQ 206
ARR +A + H+L+ER RR++I+E+M+ LQ+L +P CNK KA +LDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKT-DKASMLDEAIEYLKSLQLQ 220
Query: 207 VEFLSM 212
+ + M
Sbjct: 221 LRVMWM 226
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ++VP +K A +L+E + Y++ LQ+Q
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQ 227
Query: 207 VEFLS 211
++ L+
Sbjct: 228 IQELT 232
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 43/176 (24%)
Query: 38 GLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND 97
G+++ + G ESS D + S + S KRR LSSE ND
Sbjct: 123 GVKLSDPGDFLKESS---DNAFSSSGAVD-SDTNAPLKRRGLSSE-------------ND 165
Query: 98 LNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDS 157
L D + +E G EV +S+ N P SSK R ++ +
Sbjct: 166 LGDFS--------CDSEGGDLPEVPSST---NLPRNSSK--------------RSRSAEV 200
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 208 EFLS 211
+ LS
Sbjct: 244 KLLS 247
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 208 E 208
+
Sbjct: 418 K 418
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMKILQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 267
Query: 207 VEFLSMKLEAVNSRMNL 223
V + SRMN+
Sbjct: 268 VSMM--------SRMNM 276
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQI 296
Query: 208 EFLS 211
+ LS
Sbjct: 297 KLLS 300
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQ 73
Query: 209 FLSM 212
L M
Sbjct: 74 MLVM 77
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 257
Query: 208 EFLS 211
+ LS
Sbjct: 258 KLLS 261
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 207 VEFLS 211
++ LS
Sbjct: 296 IKLLS 300
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 207 VEFLS 211
++ LS
Sbjct: 296 IKLLS 300
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 207 VEFLS 211
V+ L+
Sbjct: 382 VQILT 386
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-HISTMLEEAVQYVKFLQLQ 295
Query: 207 VEFLS 211
++ LS
Sbjct: 296 IKLLS 300
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQI 306
Query: 208 EFLS 211
+ LS
Sbjct: 307 KLLS 310
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 207 VEFLS 211
V+ L+
Sbjct: 379 VQILT 383
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
Query: 128 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 187
G+ P S+ P+ RR ++ + H+ +ER RR++I+E++K LQ+L+P C K
Sbjct: 4 GSAPRRSTPPT----------TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT- 52
Query: 188 GKALVLDEIINYIQSLQRQVEFLSM 212
K +LDE I+Y++SLQ Q++ L M
Sbjct: 53 DKVSMLDEAIDYLKSLQLQLQMLVM 77
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 87 KIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDY-I 145
K V S L D+N + GS + ASS GN S EP + +
Sbjct: 355 KTVEEMSRRCSLQDNNRDAKRHKGS---TAQRTRFGASSKRGN-----SHKREPALNTNL 406
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
RA++G A D S+A R RRE+IS+R+KILQ+L+P +KV +L++ INY++ LQ
Sbjct: 407 KPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQL 465
Query: 206 QVEFL 210
QV+ L
Sbjct: 466 QVKVL 470
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q+
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 243
Query: 208 EFLS 211
+ LS
Sbjct: 244 KLLS 247
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+ RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLE 104
Query: 205 RQVEFL 210
Q++ L
Sbjct: 105 LQIKML 110
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
+ RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E Y++ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 206 QVEFLS 211
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 207 VEFLS 211
++ L+
Sbjct: 238 IQELT 242
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 275
Query: 208 EFLS 211
+ LS
Sbjct: 276 KLLS 279
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 9/130 (6%)
Query: 84 ESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKD 143
ESS ++S A D +D+N +K G +EN + S G+ P E ++ P++
Sbjct: 135 ESSDNAFSSSGAVD-SDTNAP-LKRRGLSSEN-DLGDFSCDSEGGDLP-EVPSSTDLPRN 190
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ L
Sbjct: 191 ----SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQL 245
Query: 204 QRQVEFLSMK 213
Q QV+ LSM+
Sbjct: 246 QLQVQMLSMR 255
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 135 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
SK SE RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+
Sbjct: 225 SKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLE 283
Query: 195 EIINYIQSLQRQVEFLS 211
E + Y++ LQ Q++ LS
Sbjct: 284 EAVQYVKFLQLQIKLLS 300
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 207 VEFLSM 212
++ ++
Sbjct: 333 IKVCTI 338
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP +K +A ++DEI++Y++ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT-DRAAMIDEIVDYVKFLRLQ 208
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 162 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+R RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
Query: 209 FLS-MKLEAVNSRM--NLTPTIEGFHP 232
+ M++ ++ M + P I+ + P
Sbjct: 313 RVQLMQMMSMGCGMVPMMFPGIQQYMP 339
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 209 FLS 211
LS
Sbjct: 75 VLS 77
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 207 VEFL 210
VE L
Sbjct: 341 VEKL 344
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 155 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 192
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 277
Query: 193 LDEIINYIQSLQRQVEFLSM 212
LDEII+Y++ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 155 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 192
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 193 LDEIINYIQSLQRQVEFLSM 212
LDEII+Y++ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 209 FLS 211
LS
Sbjct: 75 VLS 77
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 232
Query: 205 RQVEFLS 211
++++ LS
Sbjct: 233 QKIQELS 239
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 99 NDSNGKWMKTSGSKNENGSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT 155
N NG W+ + + GS+ E + AGNK E+++ S+ P + + + T
Sbjct: 79 NHGNGDWLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKPKATT 138
Query: 156 ---DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
D SLA + RRE+ISER+K+LQ+LVP KV +L++ I Y++ LQ QV+ L+
Sbjct: 139 SPKDPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQVQVKVLA 196
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R +RG ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 207 VEFLSMKLEAVNSRMNL 223
V + SRMN+
Sbjct: 266 VSMM--------SRMNM 274
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LDE + Y++ LQ+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 206 QV 207
QV
Sbjct: 84 QV 85
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 99 NDSNGKWMKTSGSKNENGSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT 155
N NG W+ + + GS+ E + AGNK E+++ S+ P + + + T
Sbjct: 147 NHGNGDWLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKPKATT 206
Query: 156 ---DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
D SLA + RRE+ISER+K+LQ+LVP KV +L++ I Y++ LQ QV+ L+
Sbjct: 207 SPKDPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 257 PQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ QV+ L LE
Sbjct: 317 HIKGLQTQVQKLHEDLE 333
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 209 FLSMKLEAVNSRMNLTPTIEGFH 231
+SM + M L ++ H
Sbjct: 484 IMSMGGGGLYMPMTLPAGMQHMH 506
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 141 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ QVE L +E
Sbjct: 283 HIKGLQHQVESLEKGME 299
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 207 VEFLSMKLEAVNSRMNL 223
V + SRMN+
Sbjct: 266 VSMM--------SRMNM 274
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKKLQLQVQ 210
Query: 209 FLSMK 213
LS +
Sbjct: 211 MLSAR 215
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 207 VE 208
V+
Sbjct: 346 VQ 347
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSAN---------- 96
SS +R+ ME+ +VT CG + D+S + SK + + N
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 204
Query: 97 -----DLND-SNGKWMKTSGSKNE-NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
D+ + ++G+ + T + N + V S A GNK + S +
Sbjct: 205 CSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSN----------- 253
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 210 L 210
+
Sbjct: 313 M 313
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSAN---------- 96
SS +R+ ME+ +VT CG + D+S + SK + + N
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 204
Query: 97 -----DLND-SNGKWMKTSGSKNE-NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
D+ + ++G+ + T + N + V S A GNK + S +
Sbjct: 205 CSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSN----------- 253
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 210 L 210
+
Sbjct: 313 M 313
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSAN---------- 96
SS +R+ ME+ +VT CG + D+S + SK + + N
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 204
Query: 97 -----DLND-SNGKWMKTSGSKNE-NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
D+ + ++G+ + T + N + V S A GNK + S +
Sbjct: 205 CSFGKDIKEMASGRCITTDRKRKRINDTDESVSLSDAIGNKSNQRSGSN----------- 253
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 210 L 210
+
Sbjct: 313 M 313
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 155 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 192
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 193 LDEIINYIQSLQRQVEFLSM 212
LDEII+Y++ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 207 VE 208
V+
Sbjct: 346 VQ 347
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSAN---------- 96
SS +R+ ME+ +VT CG + D+S + SK + + N
Sbjct: 124 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 183
Query: 97 -----DLND-SNGKWMKTSGSKNE-NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
D+ + ++G+ + T + N + V S A GNK + S +
Sbjct: 184 CSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSN----------- 232
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 291
Query: 210 L 210
+
Sbjct: 292 M 292
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV +L+E I+Y++ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 208 EFLS 211
LS
Sbjct: 271 NMLS 274
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 12/93 (12%)
Query: 120 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
+ E SA GNK ++ ++ S RR +A + H+ +ER RR++I+E+M+ LQ L
Sbjct: 338 DTELKSADGNKASQRTRSS-----------RRNRAAEVHNQSERRRRDRINEKMRTLQQL 386
Query: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+P NK KA +L+E I Y++SLQ Q++ + M
Sbjct: 387 IPNSNKT-DKASMLEEAIEYLKSLQFQLQVMWM 418
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 103 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 162
Query: 205 RQVEFLS 211
++++ LS
Sbjct: 163 QKIQELS 169
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 250
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 208 E 208
+
Sbjct: 293 Q 293
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 208 E 208
+
Sbjct: 293 Q 293
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 336
Query: 211 SMKLEAVNSRMNLTPTIEGFHPKDVSL 237
KL+ N + P+ FHP + L
Sbjct: 337 RPKLDQTNLSFSSAPSFPLFHPSFLPL 363
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 240
Query: 210 LSMK 213
+S++
Sbjct: 241 MSVR 244
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 278
Query: 210 LSMK 213
+S++
Sbjct: 279 MSVR 282
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 111 SKNENGSKAE---VEASSAAGNKPAESSKPSEPPKDY-IHVRARRGQATDSHSLAERARR 166
+K GS A+ ASS GN S EP + + RA++G A D S+A R RR
Sbjct: 373 AKRHKGSTAQRTRFGASSKRGN-----SHKREPALNTNLKPRAKQGCANDPQSIAARQRR 427
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
E+IS+R+KILQ+L+P +KV +L++ INY++ LQ QV+ L
Sbjct: 428 ERISDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQLQVKVL 470
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 11 FSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGG 70
F+A++ S+ + P+ NGGA + NM +G+ S + S+ +
Sbjct: 71 FNASSFFSFDYHRSFISPVTNGGA--FSVLEENMSYGYTGWSHHQMDSISPRVI------ 122
Query: 71 GCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNK 130
K + S ++ S + N NG W+ + + G + E + AGNK
Sbjct: 123 ----KTSNSFETTSSFELTSNSRCKPATNHGNGDWLYSDSTIVNTGLRHESASPKLAGNK 178
Query: 131 ---PAESSKPSEPPKDYIHVRARRGQAT---DSHSLAERARREKISERMKILQDLVPGCN 184
+++ S+ P + A+ T D SLA + RRE+ISER+K+LQ+LVP
Sbjct: 179 RPFTGDNTHLSKKPSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGT 238
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLS 211
KV +L++ I Y++ LQ QV+ L+
Sbjct: 239 KV-DLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV------IGKALVLDEIINYIQS 202
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNKV KA +LDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 203 LQRQVEFLSM 212
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 255
Query: 208 EFLS 211
+ LS
Sbjct: 256 KLLS 259
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 322
Query: 207 VEFL 210
V+ +
Sbjct: 323 VQMM 326
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 69 PEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQ 128
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ +VE L ++E
Sbjct: 129 HIKGLQNEVEKLHKEME 145
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQM 650
Query: 210 LSMKLEAVNSRMNLTPTIE 228
+S++ M + P ++
Sbjct: 651 MSIRTGMTLPPMVMPPGLQ 669
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 141 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
P D +HV R+G D RR++I E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 177 PSDSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNKT-DKASILDETIEYL 235
Query: 201 QSLQRQVEFLSM 212
+SLQ QV+ + M
Sbjct: 236 KSLQMQVQIMWM 247
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 308
Query: 209 FLSM 212
+ M
Sbjct: 309 VMWM 312
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA RG ATD SL R RRE+I+ER+KILQ +VP KV + +L+E ++Y++ LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV-DISTMLEEAVHYVKFLQLQ 328
Query: 207 VE 208
++
Sbjct: 329 IK 330
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 213 KLEAVNSRMNLTPTIEGFHPKDVS 236
+ +N L HP +S
Sbjct: 235 R-NGINLHHPLCLPGTTLHPLQLS 257
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
ARR ++H+L E+ RR KI +++K L+ LVPGC+ +A +LD+ I +I+SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 209 F 209
Sbjct: 79 V 79
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A LD I I+ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 207 VEFLS 211
V+ L+
Sbjct: 396 VKSLA 400
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR---- 199
Query: 218 NSRMNLTPTI--EGFHPKDVS 236
+ ++L P EG P +S
Sbjct: 200 -NGLSLHPMCFPEGLQPLQLS 219
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 141 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 199 YIQSLQRQVE 208
+I+ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 141 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 199 YIQSLQRQVE 208
+I+ LQ QVE
Sbjct: 283 HIKGLQHQVE 292
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R+R Q H+L ER RR+KI++RM+IL++L+P CNK KA +LD+ I Y+++L+ Q+
Sbjct: 749 RSRNAQV---HNLCERKRRDKINKRMRILKELIPNCNKT-DKASMLDDAIEYLKTLKLQI 804
Query: 208 E 208
+
Sbjct: 805 Q 805
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 209 FL 210
+
Sbjct: 63 VV 64
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 105 WMKTSGSKNENGSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSH 158
W+ + + GS+ E + +AGNK ES++PS+ + + + T D
Sbjct: 147 WLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQ 206
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
SLA + RRE+ISER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 207 SLAAKNRRERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 213 K 213
+
Sbjct: 256 R 256
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 314
Query: 209 FLSM 212
+ M
Sbjct: 315 VMWM 318
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG------KALVLDEIINYI 200
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + + +LDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 201 QSLQRQVEFL 210
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 311
Query: 210 LSM 212
+ M
Sbjct: 312 MWM 314
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 209 FLS 211
+
Sbjct: 63 VVC 65
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I+Y++ LQ Q++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIDYLKILQLQLQ 788
Query: 209 FLSMKLEAVNSRMNLTPTIE 228
+S++ M + P ++
Sbjct: 789 MMSIRTGMTLPPMVMPPGLQ 808
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ Q++ L+ ++E
Sbjct: 344 HIKGLQNQIQKLNKEVE 360
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG AT+ SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 208 EFLS 211
+ LS
Sbjct: 254 KLLS 257
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 114 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 173
++ S A +E + A PA PP RA A D SL R RRE+I+ER+
Sbjct: 238 QSDSNAYLEPNGGASKDPA-------PPNLDRKSRATTSAAADPQSLYARKRRERINERL 290
Query: 174 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
+ILQ+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 291 RILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 327
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
SH+L+ER +REK+++R IL+ +VP +KV+ K +LDE I Y+Q L+R+VE L
Sbjct: 431 SHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEYLQELERKVEEL 484
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 301
Query: 209 FLSMK 213
+S++
Sbjct: 302 AMSVR 306
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 266 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 325
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ Q++ L + E
Sbjct: 326 HIKGLQHQLQNLKKEQE 342
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 199 YIQSLQRQVEFL 210
+I+ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 213 K 213
+
Sbjct: 256 R 256
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 199 YIQSLQRQVEFL 210
+I+ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K A +LD + +I+ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 207 VEFLSMKLE 215
++ L + E
Sbjct: 322 LQALKHEQE 330
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISE++K L+ L P +K A +LD + YI+ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 207 VEFLS 211
V+ L+
Sbjct: 227 VKTLT 231
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 209 FLSM 212
+ M
Sbjct: 311 VMWM 314
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 209 FLSM 212
+ M
Sbjct: 311 VMWM 314
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 209 FLSM 212
+ M
Sbjct: 311 VMWM 314
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 270 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 329
Query: 199 YIQSLQRQVEFLSMKLE 215
+I+ LQ Q++ L E
Sbjct: 330 HIKGLQHQLQNLKKDQE 346
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 207 VEFLSMKLEAVNS 219
++ L + E
Sbjct: 201 LQALKHEQEKCTC 213
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 199 YIQSLQRQVEFL 210
+I+ LQ Q++ L
Sbjct: 344 HIKGLQNQIQVL 355
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 111 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 170
S+NE + + E+ E S PP+ ++R +A + H+L+E+ RR +I+
Sbjct: 101 SENETDHECDCESEEGLEALIDEMSVKPAPPRS-----SKRTRAAEVHNLSEKRRRSRIN 155
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 214
E+MK LQ+L+P +K KA +LDE I Y++ LQ QV+ LS++
Sbjct: 156 EKMKALQNLIPNSSKT-DKASMLDEAIEYLKLLQLQVQGLSVRF 198
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 207 VE 208
VE
Sbjct: 293 VE 294
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 121 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 6 CESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI 59
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
P +K KA +LD+ I Y++ LQ QV+ +
Sbjct: 60 PNSSKT-DKASMLDDAIEYLKQLQLQVQMI 88
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 224
RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+ +SM M L
Sbjct: 12 RRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLP 70
Query: 225 PTIE 228
P ++
Sbjct: 71 PAMQ 74
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 142 RRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 205 RQVEFL 210
Q++ L
Sbjct: 343 SQLQTL 348
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 134 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
S K E PK RA ATD+ S+ R RRE+I+ER++ILQ LVP KV + +L
Sbjct: 183 SPKEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTML 241
Query: 194 DEIINYIQSLQRQVEFLS 211
+E + Y++ LQ Q++ LS
Sbjct: 242 EEAVQYVKFLQLQIKLLS 259
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 209 FLSMKL 214
+++
Sbjct: 332 GKHLRI 337
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISERM+ILQ LVPG K + A +LDE I+Y++ L++QV+ L
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 219
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 207 VEFLSMKLE 215
++ +MK E
Sbjct: 301 LQ--AMKHE 307
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
HSL+ER RR+KI+++M+ LQ L+P +KV KA +LD+ I Y+++LQ Q++ +SM+
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMR 439
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 164 ARREKISERMKIL--QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
AR I ++M ++ ++ + +V+G A++L EIINY+QSLQRQVEF+SMKL VN ++
Sbjct: 160 ARLLDIHDKMMLINNKETLDFSFQVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQV 219
Query: 222 NLTPTIEGFHPKD 234
+L ++ PKD
Sbjct: 220 DLN-SLPNVLPKD 231
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RG ATD S+ R RREKI+ER+K LQ LVP +V +L+E I++++ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 208 EFL 210
E L
Sbjct: 530 ELL 532
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQ 69
Query: 207 VEFLSMKL 214
++ ++L
Sbjct: 70 LQVPKIEL 77
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD +++I+ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 207 VEFLSMKLEAVNSRMN 222
++ L E + R N
Sbjct: 203 LQALKKDKEKCSCRGN 218
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL-SMKL 214
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ FL S
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRFLQSTPP 185
Query: 215 EAVNSRMNLTPTIEGFHP 232
+N + P E + P
Sbjct: 186 PPINCNVGAAPNSEYYWP 203
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 12/91 (13%)
Query: 122 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
E SA GNK A S S RR +A + H+L+ER RRE+I+E+MK LQ+L+P
Sbjct: 331 ELESAEGNKTAPRSGSS-----------RRTRAAEVHNLSERRRRERINEKMKALQELIP 379
Query: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 380 HCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 409
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 211 SMKLEAVNSRMNLTPT-IEGFHPKDVSL 237
KL+ N + PT FHP + L
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFLPL 362
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKS-DKASMLDEVIEYLKQLQAQ 322
Query: 207 VEFL 210
++ +
Sbjct: 323 LQMI 326
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD +++I+ LQ
Sbjct: 144 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQ 203
Query: 205 RQVEFLSMKLEAVNSRMN 222
+++ L E R N
Sbjct: 204 SELQALKEDKEKCTCRGN 221
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK KA +L+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 209 FLSM 212
+ M
Sbjct: 415 VMWM 418
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 363
Query: 211 SMKLEAVNSRMNLTPT-IEGFHPKDVSL 237
KL+ N + PT FHP + L
Sbjct: 364 RPKLDQTNLSFSSAPTSFPLFHPSFLPL 391
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 207 VEFL 210
++ L
Sbjct: 194 LQTL 197
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY + L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYFKFLRAQVKALENL 334
Query: 211 SMKLEAVNSRMNLTPT-IEGFHPKDVSL 237
KL+ N + PT FHP + L
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFLPL 362
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 108 TSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 167
TS +++ S A +E SA G+ A++ +P RA R T+ S+ R RRE
Sbjct: 195 TSCCTSDSDSNASLE--SADGDGDADARRPKGKG------RAGRSATTEPQSIYARKRRE 246
Query: 168 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q+ LS
Sbjct: 247 RINERLKILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIRLLS 289
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
+A R AT+S SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 211 KADRRSATESQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 269
Query: 208 EFLS 211
+ LS
Sbjct: 270 KLLS 273
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV +L+E INY++ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|406862693|gb|EKD15742.1| helix-loop-helix DNA-binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
+HSL ER RR K++E IL+D++P C + K +L I+Y+ R +E KL+A
Sbjct: 161 AHSLIERRRRSKMNEEFGILKDMIPACTGEMHKLAILQASIDYV----RYLEDCVAKLKA 216
Query: 217 VNSRMNLTPTIE 228
N+R N TPT E
Sbjct: 217 ENNRTNATPTAE 228
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+V
Sbjct: 335 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 393
Query: 208 EFL-----SMKLEAVNSR 220
E L S ++EA SR
Sbjct: 394 EELESSKESTEIEARTSR 411
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISER+KILQ LVPG K + A +LDE I+Y++ L++QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQTL 192
>gi|359474203|ref|XP_002270239.2| PREDICTED: transcription factor GLABRA 3-like [Vitis vinifera]
Length = 633
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+V
Sbjct: 425 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 483
Query: 208 EFL-----SMKLEAVNSR 220
E L S ++EA SR
Sbjct: 484 EELESSKESTEIEARTSR 501
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 214
RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ QV+ +S+ L
Sbjct: 225 RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGL 273
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
G ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQVTLL 58
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++ L M
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 234
+V+G A++L EIINY+QSLQRQVEF+SMKL VN +++L ++ PKD
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLN-SLPNVLPKD 81
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK--- 213
SH L+ER RREK+++R IL+ +VP +KV K +LD+ I Y+Q L+R+VE L +
Sbjct: 428 SHVLSERRRREKLNKRFMILKSIVPSISKV-DKVSILDDTIQYLQELERKVEELECRREL 486
Query: 214 LEAVNSR 220
LEA+ R
Sbjct: 487 LEAITKR 493
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+A +G ATD SL R RRE+I +R++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 298
Query: 207 VEFLS 211
+ LS
Sbjct: 299 NKLLS 303
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 217
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 218 NSRMNLTPTIEGFH 231
+ M L P + H
Sbjct: 153 LNPMRLPPVLPPTH 166
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I+Y++ L+RQ+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKRQIRLL 187
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R ++HSL E+ RR KI E++K LQ LVPGC +A LD+ I YI+SLQ+ +
Sbjct: 159 RSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQHI 216
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 207 VEFLSMKLEAVNS 219
++ L + E
Sbjct: 87 LQALKHEQEKCTC 99
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
G ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKV-DIVTMLDEAIHYVKFLQNQVELL 58
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
G ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQVELL 58
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
G ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQVTLL 58
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQIKLLS 284
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 103 GKWMKTSGSKNENGSKAEVEASSAAGNKPAESSK---PSEPPK-DYIHVRARRGQATDSH 158
K +K S ++N S EA + +GN + K P EPPK DYIHVRARRGQATDSH
Sbjct: 33 AKRLKPMKSSDKNDS-LRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSH 91
Query: 159 SLAERA 164
SLAER
Sbjct: 92 SLAERV 97
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
GQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 212 M 212
M
Sbjct: 186 M 186
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 147 VRAR-RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
VR R R H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQL 155
Query: 206 QVEFLSM 212
QV+ L++
Sbjct: 156 QVQALAV 162
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQIKLLS 284
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG +K + A +LDE NY++ L+ QV E L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKALESL 397
Query: 211 SMKLEAVNSRMNLTPTIEGF 230
K++A MN PT F
Sbjct: 398 GNKVDA----MNCPPTSIAF 413
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 161 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 214
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 152 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
G T +H+L+ER RREK+++R L+ ++P +K I K +LD+ I Y+Q LQR+V+ L
Sbjct: 404 GDETANHALSERKRREKLNDRFMTLRSMIPSISK-IDKVSILDDTIEYLQELQRRVQELE 462
Query: 212 MKLEAVNSRMNL 223
E+ ++ M +
Sbjct: 463 SCRESTDTEMRM 474
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
++ G A D S+A + RRE+ISER+K+LQDLVP +KV +L++ I+Y++ LQ QV
Sbjct: 232 KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQV 290
Query: 208 EFLS 211
+ L+
Sbjct: 291 KVLA 294
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 150
>gi|217074640|gb|ACJ85680.1| unknown [Medicago truncatula]
gi|388490634|gb|AFK33383.1| unknown [Medicago truncatula]
Length = 335
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Query: 150 RRGQATDS-------HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
+ G+ATD HS+ E+ RR KI+ER +IL+DL+P C++ A L E+I Y+Q
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 203 LQRQVE 208
LQ +V+
Sbjct: 94 LQERVQ 99
>gi|357488103|ref|XP_003614339.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515674|gb|AES97297.1| Transcription factor BIM2 [Medicago truncatula]
Length = 335
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Query: 150 RRGQATDS-------HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
+ G+ATD HS+ E+ RR KI+ER +IL+DL+P C++ A L E+I Y+Q
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 203 LQRQVE 208
LQ +V+
Sbjct: 94 LQERVQ 99
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDV 235
+LDEIINY+QSLQRQVEFLSMKL VN +++ PKD+
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDI 44
>gi|297805516|ref|XP_002870642.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
gi|297316478|gb|EFH46901.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
Length = 637
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 214
T +H++ E+ RREK++ER IL+ ++P NK I K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMILRSIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497
Query: 215 EAVNSRMNLTPTIEGFHPKD 234
E+ ++ T T++ P D
Sbjct: 498 ESTDTETRGTMTMKRKKPCD 517
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 77
Query: 209 FLSM 212
++
Sbjct: 78 VCAV 81
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSKT-DKASILDGAIDYMKSL 250
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 127 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 186
AG +PA SS+ S+P + + + ++D ++A R RRE++SER+++LQ LVPG ++
Sbjct: 271 AGTEPAPSSQ-SKPRRKNVRI------SSDPQTVAARLRRERVSERLRVLQRLVPGGSR- 322
Query: 187 IGKALVLDEIINYIQSLQRQVEFL 210
+ A +LDE +Y++ L+ QV+ L
Sbjct: 323 MDTASMLDEAASYLKFLKTQVKAL 346
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 186
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
TD SL R RREKI+ER+K+LQ+LVP KV + +L+E ++YI+ +Q Q++ LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKV-DISTMLEEAVHYIKFMQLQIKLLS 309
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 33/174 (18%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSAN---------- 96
SS +R+ ME+ +VT CG + D+S + SK + + N
Sbjct: 90 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 149
Query: 97 -----DLND-SNGKWMKTSGSKNE-NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRA 149
D+ + ++G+ + T + N + V S A GNK + S +
Sbjct: 150 CSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSN----------- 198
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SL
Sbjct: 199 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSL 251
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.125 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,781,603,909
Number of Sequences: 23463169
Number of extensions: 153484453
Number of successful extensions: 615872
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 3101
Number of HSP's that attempted gapping in prelim test: 607953
Number of HSP's gapped (non-prelim): 8905
length of query: 239
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 101
effective length of database: 9,121,278,045
effective search space: 921249082545
effective search space used: 921249082545
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 74 (33.1 bits)