BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026395
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 93/157 (59%), Gaps = 4/157 (2%)
Query: 84 LLQNRMLETK-KAALQDSSKFKALARQARNESL-WYGEERPRWLGPIPYDYPSYLTGELP 141
L+ NR L K +AA + + + A A++ + WYG +R +WLGP + P+YLTGE P
Sbjct: 5 LISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFP 64
Query: 142 GDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRV 201
GDYG+D AGLS DP F+KY E++HARWA+LGALG L PE+L EPVW++
Sbjct: 65 GDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKA 124
Query: 202 GYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
G LDYLG P L A Q ++ Q +LM
Sbjct: 125 GAQIFSEGGLDYLGSPALIHA--QNIVATLAVQVVLM 159
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWA 162
Query: 233 CQALLM 238
CQ +LM
Sbjct: 163 CQVVLM 168
>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene
pratensis PE=2 SV=2
Length = 205
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
ES+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F K E++H RWA
Sbjct: 45 ESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G Q LDYLG P +L +Q ++ I
Sbjct: 105 MLGALGCVFPELLAKNGV-KFGEAVWFKAGSQIFQEGGLDYLGNP--NLVHAQSILAIWA 161
Query: 233 CQALLM 238
CQ +LM
Sbjct: 162 CQVVLM 167
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
KA+A+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLM 238
Q ++ I CQ +LM
Sbjct: 155 -QSILAIWACQVVLM 168
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
+ +++ A ++++WYG +RP++LGP + PSYL GE GDYG+D AGLS DP F +
Sbjct: 40 RTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 99
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++HARWAMLGALG L PE+L G E VW++ G LDYLG P L A
Sbjct: 100 LEVIHARWAMLGALGCLTPELLAKSGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA- 157
Query: 224 SQGVIVIAICQALLM 238
Q ++ I CQ +LM
Sbjct: 158 -QSILAIWACQVVLM 171
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 85 LQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDY 144
L+ R +K + D +A +S+WYG +RP++LGP PSYLTGE PGDY
Sbjct: 17 LKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDY 76
Query: 145 GFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYS 204
G+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 77 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV-QFGEAVWFKAGAQ 135
Query: 205 KLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
LDYLG P +L +Q ++ I Q +LM
Sbjct: 136 IFSEGGLDYLGNP--NLVHAQSILAIWATQVVLM 167
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 72 AVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYD 131
A KA+ N P L+ + + +K A A A+Q + S WYG +R +LGP+ +
Sbjct: 14 AGKAVKNLPSSALIGDARVNMRKTA--------AKAKQVSSSSPWYGSDRVLYLGPLSGE 65
Query: 132 YPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAF 191
PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV- 124
Query: 192 HLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
E W++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 125 KFGEAGWFKAGSQIFSDGGLDYLGNPSLVHA--QSLLAIWACQVVLM 169
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I C
Sbjct: 107 LGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAC 163
Query: 234 QALLM 238
Q +LM
Sbjct: 164 QVVLM 168
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLM 238
Q +LM
Sbjct: 163 AQVVLM 168
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 94/168 (55%), Gaps = 12/168 (7%)
Query: 72 AVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPY 130
A KA+ SP E+ N + +K A + A+ A + S WYG +R ++LGP
Sbjct: 14 AGKAVKLSPSSSEITGNGRVTMRKTATK--------AKPASSGSPWYGPDRVKYLGPFSG 65
Query: 131 DYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGA 190
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 191 FHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 126 -KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ +
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAVWA 162
Query: 233 CQALLM 238
Q +LM
Sbjct: 163 SQVVLM 168
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
AR + LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF K E+
Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL+ EPVW++ G LDYLG P +L +Q
Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNP--NLVHAQS 155
Query: 227 VIVIAICQALLM 238
++ + Q +LM
Sbjct: 156 ILAVLGFQVVLM 167
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
Query: 71 TAVKAIANSPLGELLQN-RMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIP 129
T+ A+ ++ G+ L+ L K A + + A +A + S+WYG +RP +LGP
Sbjct: 3 TSTAALTSTFSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFS 62
Query: 130 YDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG 189
PSYL+GE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 63 GSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 122
Query: 190 AFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 123 V-KFGEAVWFKAGSQIFAEGGLDYLGNPSLVHA--QSILAIWACQVILM 168
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 86 QNRMLETKKAALQDSSKF---KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPG 142
Q L +Q ++KF K ++ + S WYG +R ++LGP + PSYLTGE PG
Sbjct: 6 QAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 65
Query: 143 DYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVG 202
DYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 66 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAG 124
Query: 203 YSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
LDYLG P L A Q ++ I CQ +LM
Sbjct: 125 SQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 158
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 94/171 (54%), Gaps = 12/171 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKLSPSSSEITGNGKVTMRKTASK--------AKTVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 78 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 134
Query: 233 CQALLM 238
Q +LM
Sbjct: 135 SQVVLM 140
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K +A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLM 238
Q ++ I CQ +LM
Sbjct: 155 -QSILAIWACQVILM 168
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
ES+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 46 ESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG PE+L+ G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCTFPELLEKNGV-KFGEAVWFKAGSQIFAEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLM 238
Q +LM
Sbjct: 163 TQVVLM 168
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
Query: 99 DSSKFKALARQARN--ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPM 156
DS + R ++ +S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP
Sbjct: 28 DSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
Query: 157 AFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGI 216
F + E++H+RWAMLGALG + PE+L G E VW++ G LDYLG
Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGN 146
Query: 217 PGLHLAGSQGVIVIAICQALLM 238
P +L +Q ++ I Q +LM
Sbjct: 147 P--NLVHAQSILAIWAVQVVLM 166
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
Query: 99 DSSKFKALARQARN--ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPM 156
DS + R ++ +S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP
Sbjct: 28 DSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
Query: 157 AFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGI 216
F + E++H+RWAMLGALG + PE+L G E VW++ G LDYLG
Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGN 146
Query: 217 PGLHLAGSQGVIVIAICQALLM 238
P +L +Q ++ I Q +LM
Sbjct: 147 P--NLVHAQSILAIWAVQVVLM 166
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTASK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 169
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 86 QNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYG 145
Q L K Q + R A ES+WYG +RP++LGP PSYLTGE PGDYG
Sbjct: 21 QQNELVKKVGTAQARITMRRTVRSAP-ESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYG 79
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSK 205
+D A +S DP F K E++H RWAMLGALG + PE+L G E VW++ G
Sbjct: 80 WDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNG-LKFGEAVWFKAGAQI 138
Query: 206 LQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
LDY G P +L +Q ++ I CQ +LM
Sbjct: 139 FSEGGLDYAGNP--NLIHAQSILAIWACQVVLM 169
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTANK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 169
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPV 251
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
R LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF + E+
Sbjct: 41 GRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL EPVW++ G LDYLG P +L +Q
Sbjct: 101 IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQS 158
Query: 227 VIVIAICQALLM 238
++ + Q LLM
Sbjct: 159 ILAVLGFQVLLM 170
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 141 PGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAF-----HLVE 195
PG FD GL+ DP+ F + EI + R AM G V ++ G HL +
Sbjct: 192 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDD 251
Query: 196 PV 197
PV
Sbjct: 252 PV 253
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K A + A+ + S WYG
Sbjct: 3 ASTMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTASK--------AKPVSSSSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKGGSQIFSQGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ ++ S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 43 KTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 103 HCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 159
Query: 228 IVIAICQALLM 238
+ I CQ +LM
Sbjct: 160 LAIWACQVILM 170
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTVTK--------AKPLSSGSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 227 VIVIAICQALLM 238
++ I CQ +LM
Sbjct: 159 ILAIWACQVVLM 170
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K + +Q + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 35 KTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 95 LEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA- 152
Query: 224 SQGVIVIAICQALLM 238
Q ++ I Q +LM
Sbjct: 153 -QSILAIWATQVILM 166
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F A KA+ E+ +N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVNVPSSSEITRNGKVTMRKTVTK--------AKPVSSGSPWYGP 53
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RW MLGALG
Sbjct: 54 DRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGC 113
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+ G E VW++ G + LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 VFPELFARNGV-KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA--QSILAIWACQVVLM 169
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 195 FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F +S E+ N + +K + A+ A + S WYG
Sbjct: 3 ATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTK--------AKPASSSSPWYGP 54
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE P DYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 55 DRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 114
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+ G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 115 VFPELFARNG-IKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 38 KVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 97
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 98 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSI 154
Query: 228 IVIAICQALLM 238
+ I CQ +LM
Sbjct: 155 LAIWACQVVLM 165
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 89/166 (53%), Gaps = 12/166 (7%)
Query: 73 VKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDY 132
V+ AN EL R K A + + A + S WYG +R ++LGP +
Sbjct: 18 VETSANPSSQELGGARFTMRKSATTK---------KVASSGSPWYGPDRVKYLGPFSGES 68
Query: 133 PSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFH 192
PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGV-K 127
Query: 193 LVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
E VW++ G LDYLG P L A Q ++ I Q +LM
Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWATQVILM 171
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+ G E VW++ G LDYLG P L A Q
Sbjct: 101 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 157
Query: 227 VIVIAICQALLM 238
++ I CQ +LM
Sbjct: 158 ILAIWACQVVLM 169
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 195 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+ G E VW + G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWLKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 227 VIVIAICQALLM 238
++ I CQ LLM
Sbjct: 159 ILAIWACQVLLM 170
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + E + R AM G + ++ G A HLV+PV
Sbjct: 196 FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPV 252
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 104 KALARQ---ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQK 160
KA R+ A +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 47 KATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 106
Query: 161 YFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLH 220
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P
Sbjct: 107 NRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--Q 163
Query: 221 LAGSQGVIVIAICQALLM 238
L +Q ++ I CQ +LM
Sbjct: 164 LIHAQSILAIWACQVILM 181
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 45 KVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVI 104
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 105 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 161
Query: 228 IVIAICQALLM 238
+ I Q +LM
Sbjct: 162 LAIWATQVILM 172
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWA
Sbjct: 59 DSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P L +Q ++ I
Sbjct: 119 MLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--QLIHAQSILAIWA 175
Query: 233 CQALLM 238
CQ +LM
Sbjct: 176 CQVILM 181
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 263
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 95 AALQDSSKFKALA-RQARNESL---------WYGEERPRWLGPIP-YDYPSYLTGELPGD 143
AAL S KAL RQ R + + +YG +R ++LGP D P YLTGE PGD
Sbjct: 2 AALIARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGD 61
Query: 144 YGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGY 203
YG+D AGLS DP F +Y E++HARWA+LGALG L PE+L EPVW++ G
Sbjct: 62 YGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGA 121
Query: 204 SKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
L+YLG L A Q +I Q +LM
Sbjct: 122 QIFADGGLNYLGNESLIHA--QSIIATLAVQVVLM 154
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N +K + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKFSPSSSEITGNGKATMRKTVTK--------AKPVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D A LS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 21/174 (12%)
Query: 69 PFTAVKAIANSPLG-ELLQN---RMLETKKAALQDSSKFKALARQARNESLWYGEERPRW 124
P A KA+ +P EL N M +T KA + DS WYG +R ++
Sbjct: 11 PALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDSP--------------WYGPDRVKY 56
Query: 125 LGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEV 184
LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+
Sbjct: 57 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116
Query: 185 LDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
L G E VW++ G LDYLG P L A Q ++ I Q +LM
Sbjct: 117 LARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILSIWATQVILM 167
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLM 238
Q +LM
Sbjct: 164 QVVLM 168
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 46 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAM 105
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G L YLG P L A Q ++ I C
Sbjct: 106 LGALGCVFPELLARNGV-KFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA--QSILAIWAC 162
Query: 234 QALLM 238
Q +LM
Sbjct: 163 QVVLM 167
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLM 238
Q +LM
Sbjct: 165 QVILM 169
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLM 238
Q +LM
Sbjct: 165 QVILM 169
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLM 238
Q +LM
Sbjct: 165 QVILM 169
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLM 238
Q +LM
Sbjct: 164 QVVLM 168
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 56 SPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAM 115
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 116 LGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIWAC 172
Query: 234 QALLM 238
Q +LM
Sbjct: 173 QVILM 177
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL++DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 203 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 102 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 161
K A + A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 31 KSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 90
Query: 162 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 221
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 91 RELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 149
Query: 222 AGSQGVIVIAICQALLM 238
A Q ++ I Q +LM
Sbjct: 150 A--QSILAIWAVQVVLM 164
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG-----AFHLVEPV 197
FD GL+ DP AF + EI + R AM G V ++ G A HL +PV
Sbjct: 190 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 246
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 116 WYGEERPRWLGPIPYD-YPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAML 174
+YG R +WLGP + P+YLTGE PGDYG+D AGLS DP F++Y E++HARWAML
Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95
Query: 175 GALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQ 234
GALG PE+L G E VW++ G LDYLG P L A Q ++ + Q
Sbjct: 96 GALGCQTPELLAKSGT-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QNIVATSAVQ 152
Query: 235 ALLM 238
+LM
Sbjct: 153 VILM 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,957,138
Number of Sequences: 539616
Number of extensions: 3705969
Number of successful extensions: 9030
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8816
Number of HSP's gapped (non-prelim): 165
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)