Query 026403
Match_columns 239
No_of_seqs 121 out of 1082
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 07:34:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026403.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026403hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2728 Uncharacterized conser 100.0 1.1E-60 2.3E-65 417.2 16.7 227 12-239 1-230 (302)
2 PF04127 DFP: DNA / pantothena 100.0 7.9E-46 1.7E-50 316.1 10.8 143 42-238 2-145 (185)
3 PRK13982 bifunctional SbtC-lik 100.0 3.5E-42 7.5E-47 328.7 17.8 171 12-239 225-399 (475)
4 PRK05579 bifunctional phosphop 100.0 6.5E-39 1.4E-43 301.6 18.0 172 11-239 159-330 (399)
5 PRK09620 hypothetical protein; 100.0 6.7E-39 1.4E-43 281.6 16.0 146 42-238 2-156 (229)
6 TIGR00521 coaBC_dfp phosphopan 100.0 4.2E-38 9.2E-43 295.2 17.9 170 14-239 158-327 (390)
7 PRK06732 phosphopantothenate-- 100.0 7.6E-36 1.7E-40 261.8 14.6 144 44-238 1-162 (229)
8 TIGR02114 coaB_strep phosphopa 100.0 1.1E-33 2.5E-38 247.8 14.3 142 45-238 1-161 (227)
9 COG0452 Dfp Phosphopantothenoy 100.0 7.8E-32 1.7E-36 253.1 14.9 167 15-238 158-324 (392)
10 PRK05867 short chain dehydroge 97.8 0.00018 3.9E-09 62.4 10.4 35 42-94 8-42 (253)
11 PRK07062 short chain dehydroge 97.8 0.00013 2.8E-09 63.6 9.4 35 42-94 7-41 (265)
12 PRK05854 short chain dehydroge 97.8 0.00013 2.8E-09 66.2 9.6 35 42-94 13-47 (313)
13 PRK07063 short chain dehydroge 97.8 0.00021 4.6E-09 62.1 10.4 35 42-94 6-40 (260)
14 PRK07523 gluconate 5-dehydroge 97.8 0.00023 5E-09 61.7 10.6 35 42-94 9-43 (255)
15 PRK06138 short chain dehydroge 97.8 0.00021 4.7E-09 61.3 10.2 35 42-94 4-38 (252)
16 PRK06194 hypothetical protein; 97.8 0.00025 5.5E-09 62.5 10.5 35 42-94 5-39 (287)
17 PRK07478 short chain dehydroge 97.8 0.00024 5.3E-09 61.5 10.2 35 42-94 5-39 (254)
18 PRK07097 gluconate 5-dehydroge 97.8 0.00028 6.2E-09 61.7 10.6 35 42-94 9-43 (265)
19 PRK07814 short chain dehydroge 97.8 0.00025 5.3E-09 62.1 10.2 35 42-94 9-43 (263)
20 PRK06935 2-deoxy-D-gluconate 3 97.7 0.00031 6.8E-09 61.0 10.8 44 31-94 5-48 (258)
21 PRK08643 acetoin reductase; Va 97.7 0.00029 6.3E-09 61.0 10.5 34 43-94 2-35 (256)
22 PRK08213 gluconate 5-dehydroge 97.7 0.00031 6.7E-09 61.0 10.5 35 42-94 11-45 (259)
23 PRK08628 short chain dehydroge 97.7 0.00024 5.1E-09 61.6 9.7 35 42-94 6-40 (258)
24 PRK12429 3-hydroxybutyrate deh 97.7 0.00035 7.5E-09 60.1 10.7 35 42-94 3-37 (258)
25 PRK07035 short chain dehydroge 97.7 0.00043 9.3E-09 59.8 11.3 35 42-94 7-41 (252)
26 PRK12937 short chain dehydroge 97.7 0.00032 6.8E-09 60.0 10.3 35 42-94 4-38 (245)
27 PRK13394 3-hydroxybutyrate deh 97.7 0.00032 6.8E-09 60.6 10.4 35 42-94 6-40 (262)
28 PRK05876 short chain dehydroge 97.7 0.00033 7.2E-09 62.2 10.7 35 42-94 5-39 (275)
29 PRK07774 short chain dehydroge 97.7 0.00033 7.3E-09 60.1 10.3 35 42-94 5-39 (250)
30 PRK06114 short chain dehydroge 97.7 0.00042 9E-09 60.2 11.0 35 42-94 7-41 (254)
31 TIGR01832 kduD 2-deoxy-D-gluco 97.7 0.00032 7E-09 60.3 10.1 35 42-94 4-38 (248)
32 PRK08589 short chain dehydroge 97.7 0.00028 6E-09 62.3 9.8 35 42-94 5-39 (272)
33 PRK08416 7-alpha-hydroxysteroi 97.7 0.00031 6.7E-09 61.3 9.5 35 42-94 7-41 (260)
34 PRK08085 gluconate 5-dehydroge 97.7 0.00045 9.8E-09 59.8 10.5 35 42-94 8-42 (254)
35 PRK06128 oxidoreductase; Provi 97.7 0.00037 8E-09 62.5 10.1 35 42-94 54-88 (300)
36 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00045 9.7E-09 59.0 10.1 35 42-94 5-39 (251)
37 PRK12939 short chain dehydroge 97.6 0.00053 1.2E-08 58.7 10.4 35 42-94 6-40 (250)
38 PRK07109 short chain dehydroge 97.6 0.00055 1.2E-08 62.9 11.0 35 42-94 7-41 (334)
39 PRK07666 fabG 3-ketoacyl-(acyl 97.6 0.00059 1.3E-08 58.4 10.5 35 42-94 6-40 (239)
40 PRK07533 enoyl-(acyl carrier p 97.6 0.00052 1.1E-08 60.1 10.4 36 42-94 9-45 (258)
41 PRK12481 2-deoxy-D-gluconate 3 97.6 0.00042 9.2E-09 60.4 9.8 35 42-94 7-41 (251)
42 PRK08251 short chain dehydroge 97.6 0.00037 8E-09 59.9 9.2 34 43-94 2-35 (248)
43 PRK05866 short chain dehydroge 97.6 0.00054 1.2E-08 61.5 10.6 35 42-94 39-73 (293)
44 PRK06124 gluconate 5-dehydroge 97.6 0.00061 1.3E-08 58.9 10.6 35 42-94 10-44 (256)
45 PRK08936 glucose-1-dehydrogena 97.6 0.00055 1.2E-08 59.6 10.3 35 42-94 6-40 (261)
46 PRK08226 short chain dehydroge 97.6 0.00063 1.4E-08 59.1 10.7 35 42-94 5-39 (263)
47 PRK06197 short chain dehydroge 97.6 0.00035 7.5E-09 62.7 9.3 35 42-94 15-49 (306)
48 COG4221 Short-chain alcohol de 97.6 0.00032 6.9E-09 62.6 8.8 36 42-95 5-40 (246)
49 PRK07984 enoyl-(acyl carrier p 97.6 0.00044 9.5E-09 61.3 9.7 36 42-94 5-41 (262)
50 PRK05557 fabG 3-ketoacyl-(acyl 97.6 0.0007 1.5E-08 57.5 10.6 35 42-94 4-38 (248)
51 PRK12938 acetyacetyl-CoA reduc 97.6 0.00058 1.3E-08 58.6 10.2 35 42-94 2-36 (246)
52 PRK06196 oxidoreductase; Provi 97.6 0.00063 1.4E-08 61.4 10.8 35 42-94 25-59 (315)
53 PRK06139 short chain dehydroge 97.6 0.00063 1.4E-08 62.6 10.6 35 42-94 6-40 (330)
54 PRK06949 short chain dehydroge 97.6 0.0008 1.7E-08 58.0 10.7 35 42-94 8-42 (258)
55 PRK12823 benD 1,6-dihydroxycyc 97.6 0.00047 1E-08 59.8 9.3 35 42-94 7-41 (260)
56 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00046 1E-08 60.1 9.3 35 42-94 5-39 (263)
57 PRK05717 oxidoreductase; Valid 97.6 0.00054 1.2E-08 59.4 9.6 35 42-94 9-43 (255)
58 PRK05872 short chain dehydroge 97.6 0.00043 9.3E-09 62.1 9.2 35 42-94 8-42 (296)
59 PRK06841 short chain dehydroge 97.6 0.00057 1.2E-08 59.0 9.6 35 42-94 14-48 (255)
60 PRK07231 fabG 3-ketoacyl-(acyl 97.6 0.00072 1.6E-08 57.9 10.1 36 42-95 4-39 (251)
61 PRK07370 enoyl-(acyl carrier p 97.6 0.00066 1.4E-08 59.6 10.1 36 42-94 5-41 (258)
62 PRK07576 short chain dehydroge 97.5 0.00083 1.8E-08 58.9 10.6 35 42-94 8-42 (264)
63 PRK08278 short chain dehydroge 97.5 0.0009 1.9E-08 59.1 10.8 36 42-95 5-40 (273)
64 PRK09242 tropinone reductase; 97.5 0.00091 2E-08 58.0 10.7 35 42-94 8-42 (257)
65 PRK08277 D-mannonate oxidoredu 97.5 0.00077 1.7E-08 59.2 10.4 35 42-94 9-43 (278)
66 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.00065 1.4E-08 59.3 9.8 35 42-94 4-38 (262)
67 PRK06179 short chain dehydroge 97.5 0.00059 1.3E-08 59.6 9.5 36 42-95 3-38 (270)
68 PRK06172 short chain dehydroge 97.5 0.00083 1.8E-08 58.0 10.4 35 42-94 6-40 (253)
69 PRK08690 enoyl-(acyl carrier p 97.5 0.00063 1.4E-08 59.8 9.7 36 42-93 5-40 (261)
70 PRK07890 short chain dehydroge 97.5 0.00079 1.7E-08 58.1 10.2 35 42-94 4-38 (258)
71 PRK08339 short chain dehydroge 97.5 0.0006 1.3E-08 60.0 9.5 35 42-94 7-41 (263)
72 PRK07791 short chain dehydroge 97.5 0.00078 1.7E-08 60.2 10.4 36 42-95 5-40 (286)
73 PF00106 adh_short: short chai 97.5 0.00084 1.8E-08 54.1 9.7 94 44-188 1-94 (167)
74 PRK12827 short chain dehydroge 97.5 0.00095 2.1E-08 56.9 10.5 35 42-94 5-39 (249)
75 PRK06603 enoyl-(acyl carrier p 97.5 0.00076 1.6E-08 59.3 10.1 36 42-94 7-43 (260)
76 PRK08159 enoyl-(acyl carrier p 97.5 0.00074 1.6E-08 60.0 10.1 36 42-94 9-45 (272)
77 KOG1205 Predicted dehydrogenas 97.5 0.00043 9.3E-09 63.1 8.6 36 42-95 11-46 (282)
78 PRK12745 3-ketoacyl-(acyl-carr 97.5 0.0008 1.7E-08 58.0 9.9 33 44-94 3-35 (256)
79 PRK12744 short chain dehydroge 97.5 0.00099 2.1E-08 57.9 10.6 35 42-94 7-41 (257)
80 TIGR01963 PHB_DH 3-hydroxybuty 97.5 0.00088 1.9E-08 57.5 10.1 34 43-94 1-34 (255)
81 PRK07024 short chain dehydroge 97.5 0.00071 1.5E-08 58.9 9.5 34 43-94 2-35 (257)
82 PRK12743 oxidoreductase; Provi 97.5 0.00092 2E-08 58.1 10.2 34 43-94 2-35 (256)
83 PRK05653 fabG 3-ketoacyl-(acyl 97.5 0.0011 2.5E-08 56.1 10.5 35 42-94 4-38 (246)
84 PRK08265 short chain dehydroge 97.5 0.00095 2.1E-08 58.4 10.2 35 42-94 5-39 (261)
85 COG0300 DltE Short-chain dehyd 97.5 0.00071 1.5E-08 61.2 9.5 37 42-96 5-41 (265)
86 PRK06079 enoyl-(acyl carrier p 97.5 0.00075 1.6E-08 58.9 9.5 36 42-94 6-42 (252)
87 TIGR03206 benzo_BadH 2-hydroxy 97.5 0.0011 2.4E-08 56.8 10.4 35 42-94 2-36 (250)
88 PRK06500 short chain dehydroge 97.5 0.00099 2.1E-08 57.1 9.9 35 42-94 5-39 (249)
89 PRK06398 aldose dehydrogenase; 97.5 0.00075 1.6E-08 59.0 9.2 35 42-94 5-39 (258)
90 PRK07677 short chain dehydroge 97.5 0.001 2.2E-08 57.6 9.9 34 43-94 1-34 (252)
91 PRK08063 enoyl-(acyl carrier p 97.5 0.0013 2.9E-08 56.4 10.6 33 42-92 3-35 (250)
92 PRK08862 short chain dehydroge 97.5 0.0016 3.5E-08 56.4 11.1 35 42-94 4-38 (227)
93 PRK08945 putative oxoacyl-(acy 97.5 0.0011 2.4E-08 57.1 10.0 35 42-94 11-45 (247)
94 PRK07792 fabG 3-ketoacyl-(acyl 97.5 0.001 2.3E-08 60.0 10.2 35 42-94 11-45 (306)
95 PRK09186 flagellin modificatio 97.5 0.00077 1.7E-08 58.1 9.0 35 42-94 3-37 (256)
96 PRK06077 fabG 3-ketoacyl-(acyl 97.4 0.0014 3E-08 56.3 10.5 35 42-94 5-39 (252)
97 PRK08993 2-deoxy-D-gluconate 3 97.4 0.001 2.2E-08 57.8 9.8 34 42-93 9-42 (253)
98 PLN02253 xanthoxin dehydrogena 97.4 0.00089 1.9E-08 58.9 9.5 35 42-94 17-51 (280)
99 PRK12859 3-ketoacyl-(acyl-carr 97.4 0.0016 3.6E-08 56.7 11.1 102 42-187 5-109 (256)
100 PLN02780 ketoreductase/ oxidor 97.4 0.00084 1.8E-08 61.4 9.6 35 42-94 52-86 (320)
101 PRK12746 short chain dehydroge 97.4 0.0015 3.3E-08 56.3 10.5 34 42-93 5-38 (254)
102 PRK05875 short chain dehydroge 97.4 0.0017 3.6E-08 56.9 10.8 35 42-94 6-40 (276)
103 PRK12384 sorbitol-6-phosphate 97.4 0.0011 2.4E-08 57.4 9.5 34 43-94 2-35 (259)
104 PRK08303 short chain dehydroge 97.4 0.0015 3.3E-08 59.2 10.8 36 42-95 7-42 (305)
105 PRK07453 protochlorophyllide o 97.4 0.0011 2.4E-08 60.0 9.8 35 42-94 5-39 (322)
106 PRK05565 fabG 3-ketoacyl-(acyl 97.4 0.0016 3.4E-08 55.5 10.3 35 42-94 4-39 (247)
107 PRK07454 short chain dehydroge 97.4 0.0015 3.2E-08 56.0 10.1 35 42-94 5-39 (241)
108 PRK07825 short chain dehydroge 97.4 0.0017 3.7E-08 56.9 10.6 35 42-94 4-38 (273)
109 PRK06182 short chain dehydroge 97.4 0.0015 3.2E-08 57.4 10.2 35 42-94 2-36 (273)
110 PRK08594 enoyl-(acyl carrier p 97.4 0.0011 2.4E-08 58.2 9.4 36 42-94 6-42 (257)
111 PRK07856 short chain dehydroge 97.4 0.00094 2E-08 57.8 8.8 36 42-95 5-40 (252)
112 PRK07985 oxidoreductase; Provi 97.4 0.0013 2.7E-08 59.2 9.8 35 42-94 48-82 (294)
113 PRK12825 fabG 3-ketoacyl-(acyl 97.4 0.0018 3.9E-08 54.9 10.2 36 42-95 5-40 (249)
114 PRK08340 glucose-1-dehydrogena 97.4 0.0017 3.7E-08 56.6 10.2 33 44-94 1-33 (259)
115 PRK06720 hypothetical protein; 97.4 0.0026 5.6E-08 53.4 10.9 35 42-94 15-49 (169)
116 PRK12935 acetoacetyl-CoA reduc 97.4 0.0017 3.6E-08 55.8 9.9 35 42-94 5-39 (247)
117 PRK09072 short chain dehydroge 97.4 0.0018 3.9E-08 56.4 10.3 35 42-94 4-38 (263)
118 PRK07326 short chain dehydroge 97.4 0.0017 3.8E-08 55.2 9.9 35 42-94 5-39 (237)
119 PRK06914 short chain dehydroge 97.3 0.0011 2.4E-08 58.2 8.8 35 42-94 2-36 (280)
120 KOG1201 Hydroxysteroid 17-beta 97.3 0.0016 3.5E-08 59.7 10.0 36 42-95 37-72 (300)
121 PRK08217 fabG 3-ketoacyl-(acyl 97.3 0.0022 4.7E-08 54.8 10.4 35 42-94 4-38 (253)
122 PRK12828 short chain dehydroge 97.3 0.0023 4.9E-08 54.2 10.3 35 42-94 6-40 (239)
123 PRK12829 short chain dehydroge 97.3 0.0018 4E-08 55.9 9.9 35 42-94 10-44 (264)
124 PRK06113 7-alpha-hydroxysteroi 97.3 0.0023 5E-08 55.5 10.5 35 42-94 10-44 (255)
125 PRK06181 short chain dehydroge 97.3 0.0022 4.7E-08 55.7 10.2 34 43-94 1-34 (263)
126 PRK08415 enoyl-(acyl carrier p 97.3 0.002 4.3E-08 57.4 10.1 36 42-94 4-40 (274)
127 PRK07806 short chain dehydroge 97.3 0.0021 4.6E-08 55.2 10.0 35 42-94 5-39 (248)
128 PRK06198 short chain dehydroge 97.3 0.0021 4.5E-08 55.6 9.8 35 42-94 5-40 (260)
129 PRK06701 short chain dehydroge 97.3 0.0022 4.8E-08 57.4 10.3 35 42-94 45-79 (290)
130 PRK06484 short chain dehydroge 97.3 0.0017 3.7E-08 62.4 10.2 74 18-94 214-302 (520)
131 PRK08263 short chain dehydroge 97.3 0.0015 3.3E-08 57.5 9.0 35 42-94 2-36 (275)
132 PRK06505 enoyl-(acyl carrier p 97.3 0.002 4.4E-08 57.1 9.8 36 42-94 6-42 (271)
133 PRK09134 short chain dehydroge 97.3 0.0025 5.5E-08 55.3 10.2 35 42-94 8-42 (258)
134 TIGR01829 AcAcCoA_reduct aceto 97.3 0.0027 5.8E-08 54.0 10.0 33 44-94 1-33 (242)
135 PRK07067 sorbitol dehydrogenas 97.3 0.0022 4.8E-08 55.5 9.7 35 42-94 5-39 (257)
136 TIGR02415 23BDH acetoin reduct 97.3 0.0029 6.3E-08 54.4 10.2 33 44-94 1-33 (254)
137 PRK06997 enoyl-(acyl carrier p 97.2 0.0024 5.1E-08 56.2 9.8 35 42-93 5-40 (260)
138 PRK12747 short chain dehydroge 97.2 0.0031 6.8E-08 54.5 10.4 34 42-93 3-36 (252)
139 PRK06463 fabG 3-ketoacyl-(acyl 97.2 0.0028 6E-08 55.0 10.1 35 42-94 6-40 (255)
140 PRK05650 short chain dehydroge 97.2 0.0027 5.8E-08 55.7 10.0 33 44-94 1-33 (270)
141 PRK07201 short chain dehydroge 97.2 0.0022 4.8E-08 63.3 10.5 35 42-94 370-404 (657)
142 PRK06180 short chain dehydroge 97.2 0.0024 5.3E-08 56.3 9.8 35 42-94 3-37 (277)
143 PRK06123 short chain dehydroge 97.2 0.0027 5.8E-08 54.4 9.7 33 43-93 2-34 (248)
144 PRK05855 short chain dehydroge 97.2 0.0049 1.1E-07 59.2 12.5 55 20-94 276-348 (582)
145 PRK09135 pteridine reductase; 97.2 0.0016 3.5E-08 55.5 8.2 35 42-94 5-39 (249)
146 PRK06171 sorbitol-6-phosphate 97.2 0.0019 4.2E-08 56.2 8.9 36 42-95 8-43 (266)
147 PRK07831 short chain dehydroge 97.2 0.0022 4.7E-08 55.9 9.1 35 42-94 16-51 (262)
148 PRK06550 fabG 3-ketoacyl-(acyl 97.2 0.0016 3.5E-08 55.5 8.0 36 42-95 4-39 (235)
149 PRK06523 short chain dehydroge 97.2 0.0018 4E-08 56.0 8.5 36 42-95 8-43 (260)
150 PRK07832 short chain dehydroge 97.2 0.0037 8E-08 54.9 10.4 33 44-94 1-33 (272)
151 PRK08703 short chain dehydroge 97.2 0.0034 7.4E-08 53.8 9.9 35 42-94 5-39 (239)
152 PRK08220 2,3-dihydroxybenzoate 97.2 0.0023 4.9E-08 55.0 8.8 36 42-95 7-42 (252)
153 PRK12936 3-ketoacyl-(acyl-carr 97.2 0.0037 8.1E-08 53.2 10.1 35 42-94 5-39 (245)
154 PRK06947 glucose-1-dehydrogena 97.2 0.0031 6.7E-08 54.1 9.7 33 44-94 3-35 (248)
155 TIGR01289 LPOR light-dependent 97.2 0.0025 5.5E-08 57.8 9.5 34 43-94 3-37 (314)
156 PRK07577 short chain dehydroge 97.2 0.0026 5.6E-08 54.1 8.8 37 42-96 2-38 (234)
157 PRK06057 short chain dehydroge 97.2 0.0045 9.7E-08 53.7 10.4 35 42-94 6-40 (255)
158 PRK06482 short chain dehydroge 97.2 0.0025 5.4E-08 55.9 8.9 33 44-94 3-35 (276)
159 PRK08267 short chain dehydroge 97.2 0.0027 5.9E-08 55.1 9.1 33 44-94 2-34 (260)
160 PRK06484 short chain dehydroge 97.1 0.0029 6.2E-08 60.8 9.9 35 42-94 4-38 (520)
161 PRK12748 3-ketoacyl-(acyl-carr 97.1 0.0037 8E-08 54.2 9.7 36 42-94 4-40 (256)
162 PRK08264 short chain dehydroge 97.1 0.002 4.4E-08 54.9 7.8 37 42-96 5-42 (238)
163 PRK07889 enoyl-(acyl carrier p 97.1 0.0039 8.4E-08 54.6 9.6 36 42-94 6-42 (256)
164 PRK07775 short chain dehydroge 97.1 0.0054 1.2E-07 54.1 10.5 35 42-94 9-43 (274)
165 PRK10538 malonic semialdehyde 97.1 0.0031 6.8E-08 54.5 8.7 33 44-94 1-33 (248)
166 PRK06483 dihydromonapterin red 97.0 0.0049 1.1E-07 52.7 9.4 34 43-94 2-35 (236)
167 PRK07074 short chain dehydroge 97.0 0.0031 6.8E-08 54.5 8.2 34 43-94 2-35 (257)
168 PRK09730 putative NAD(P)-bindi 97.0 0.0057 1.2E-07 52.1 9.6 32 44-93 2-33 (247)
169 PRK05693 short chain dehydroge 97.0 0.0063 1.4E-07 53.4 10.0 33 44-94 2-34 (274)
170 PRK07904 short chain dehydroge 97.0 0.0071 1.5E-07 52.9 10.2 36 42-95 7-43 (253)
171 PRK05993 short chain dehydroge 97.0 0.0076 1.6E-07 53.2 10.3 34 43-94 4-37 (277)
172 KOG0725 Reductases with broad 96.9 0.0091 2E-07 53.8 10.6 37 42-96 7-43 (270)
173 PRK08642 fabG 3-ketoacyl-(acyl 96.9 0.0063 1.4E-07 52.2 9.2 35 42-94 4-38 (253)
174 TIGR02632 RhaD_aldol-ADH rhamn 96.9 0.0055 1.2E-07 61.8 10.1 35 42-94 413-447 (676)
175 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.0075 1.6E-07 57.2 10.5 25 70-94 219-243 (450)
176 PRK12824 acetoacetyl-CoA reduc 96.9 0.0079 1.7E-07 51.2 9.6 33 44-94 3-35 (245)
177 PRK06125 short chain dehydroge 96.9 0.009 2E-07 51.9 9.9 35 42-94 6-40 (259)
178 smart00822 PKS_KR This enzymat 96.8 0.01 2.2E-07 46.9 9.2 33 44-94 1-34 (180)
179 PRK07069 short chain dehydroge 96.8 0.0064 1.4E-07 52.1 8.5 32 45-94 1-32 (251)
180 KOG1502 Flavonol reductase/cin 96.8 0.004 8.7E-08 57.8 7.6 36 42-95 5-40 (327)
181 PLN02778 3,5-epimerase/4-reduc 96.7 0.0047 1E-07 55.8 7.2 32 42-91 8-39 (298)
182 KOG1210 Predicted 3-ketosphing 96.7 0.0062 1.3E-07 56.3 7.9 37 43-97 33-69 (331)
183 PRK08177 short chain dehydroge 96.7 0.0086 1.9E-07 51.0 8.4 34 44-95 2-35 (225)
184 KOG1208 Dehydrogenases with di 96.7 0.015 3.2E-07 53.8 10.3 36 42-95 34-69 (314)
185 TIGR02685 pter_reduc_Leis pter 96.7 0.0097 2.1E-07 52.1 8.6 33 44-94 2-34 (267)
186 PRK09291 short chain dehydroge 96.7 0.013 2.9E-07 50.3 9.3 34 43-94 2-35 (257)
187 PRK08324 short chain dehydroge 96.6 0.015 3.3E-07 58.6 10.6 35 42-94 421-455 (681)
188 PRK13656 trans-2-enoyl-CoA red 96.6 0.027 5.8E-07 53.7 11.6 64 11-93 9-74 (398)
189 PLN02695 GDP-D-mannose-3',5'-e 96.6 0.0098 2.1E-07 55.4 8.6 40 38-95 16-55 (370)
190 COG1086 Predicted nucleoside-d 96.6 0.016 3.5E-07 57.3 10.2 37 42-96 249-285 (588)
191 PLN02896 cinnamyl-alcohol dehy 96.6 0.011 2.5E-07 54.0 8.7 35 42-94 9-43 (353)
192 PRK06940 short chain dehydroge 96.5 0.018 4E-07 51.0 9.6 32 43-94 2-33 (275)
193 PRK05599 hypothetical protein; 96.5 0.022 4.7E-07 49.5 9.8 32 44-94 1-32 (246)
194 PRK07060 short chain dehydroge 96.5 0.027 5.8E-07 48.0 10.1 35 42-94 8-42 (245)
195 PF13561 adh_short_C2: Enoyl-( 96.5 0.016 3.5E-07 49.9 8.7 82 69-187 4-86 (241)
196 KOG1014 17 beta-hydroxysteroid 96.4 0.009 1.9E-07 55.1 6.9 122 42-220 48-170 (312)
197 PLN02662 cinnamyl-alcohol dehy 96.4 0.0068 1.5E-07 54.1 5.8 37 41-95 2-38 (322)
198 TIGR01830 3oxo_ACP_reduc 3-oxo 96.4 0.028 6.1E-07 47.5 9.2 26 70-95 7-32 (239)
199 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.028 6.1E-07 47.9 8.9 25 70-94 7-31 (239)
200 PRK08125 bifunctional UDP-gluc 96.2 0.012 2.7E-07 58.9 7.1 36 42-95 314-350 (660)
201 PRK15181 Vi polysaccharide bio 96.2 0.0097 2.1E-07 54.6 5.7 44 31-94 5-48 (348)
202 TIGR03466 HpnA hopanoid-associ 96.1 0.024 5.3E-07 50.3 8.0 35 44-96 1-35 (328)
203 PRK09987 dTDP-4-dehydrorhamnos 96.1 0.016 3.5E-07 52.0 6.6 32 44-94 1-32 (299)
204 PLN02583 cinnamoyl-CoA reducta 95.9 0.014 3.1E-07 52.3 5.5 35 42-94 5-39 (297)
205 TIGR02622 CDP_4_6_dhtase CDP-g 95.9 0.015 3.3E-07 53.1 5.6 36 42-95 3-38 (349)
206 PRK12367 short chain dehydroge 95.8 0.016 3.5E-07 50.9 5.4 36 42-95 13-48 (245)
207 PLN00015 protochlorophyllide r 95.8 0.041 9E-07 49.6 8.1 25 70-94 6-31 (308)
208 PLN02986 cinnamyl-alcohol dehy 95.8 0.018 4E-07 51.7 5.8 37 42-96 4-40 (322)
209 PLN02730 enoyl-[acyl-carrier-p 95.8 0.015 3.3E-07 53.2 5.3 33 42-90 8-40 (303)
210 PF01073 3Beta_HSD: 3-beta hyd 95.8 0.023 5E-07 51.2 6.4 25 70-94 6-32 (280)
211 KOG1209 1-Acyl dihydroxyaceton 95.8 0.051 1.1E-06 48.4 8.2 38 42-96 6-43 (289)
212 PLN02653 GDP-mannose 4,6-dehyd 95.8 0.015 3.4E-07 52.7 5.2 36 42-95 5-40 (340)
213 PF08659 KR: KR domain; Inter 95.7 0.033 7.2E-07 46.6 6.7 32 45-94 2-34 (181)
214 PRK05786 fabG 3-ketoacyl-(acyl 95.7 0.024 5.1E-07 48.2 5.6 36 42-95 4-39 (238)
215 PRK07578 short chain dehydroge 95.6 0.063 1.4E-06 44.7 8.1 32 44-94 1-32 (199)
216 PRK06924 short chain dehydroge 95.6 0.02 4.4E-07 49.1 5.0 34 44-95 2-35 (251)
217 PF04321 RmlD_sub_bind: RmlD s 95.6 0.029 6.4E-07 50.5 6.2 33 44-94 1-33 (286)
218 PRK12742 oxidoreductase; Provi 95.6 0.026 5.6E-07 48.0 5.4 35 42-94 5-39 (237)
219 PLN02989 cinnamyl-alcohol dehy 95.5 0.026 5.5E-07 50.8 5.4 36 42-95 4-39 (325)
220 PLN00198 anthocyanidin reducta 95.4 0.03 6.4E-07 50.8 5.6 36 42-95 8-43 (338)
221 PRK06101 short chain dehydroge 95.3 0.029 6.4E-07 48.2 5.0 33 44-94 2-34 (240)
222 PLN02686 cinnamoyl-CoA reducta 95.3 0.03 6.5E-07 52.1 5.4 35 42-94 52-86 (367)
223 PRK07102 short chain dehydroge 95.3 0.032 6.9E-07 47.9 5.1 34 44-95 2-35 (243)
224 TIGR01472 gmd GDP-mannose 4,6- 95.2 0.03 6.5E-07 51.0 5.1 34 44-95 1-34 (343)
225 TIGR01500 sepiapter_red sepiap 95.2 0.1 2.2E-06 45.3 8.2 32 45-94 2-37 (256)
226 PRK07041 short chain dehydroge 95.2 0.11 2.4E-06 43.9 8.2 25 70-94 6-30 (230)
227 COG1028 FabG Dehydrogenases wi 95.2 0.04 8.6E-07 47.3 5.4 37 42-96 4-40 (251)
228 PLN02650 dihydroflavonol-4-red 95.1 0.038 8.2E-07 50.4 5.3 36 42-95 4-39 (351)
229 PLN02572 UDP-sulfoquinovose sy 95.1 0.034 7.4E-07 53.3 5.1 34 42-93 46-79 (442)
230 TIGR01181 dTDP_gluc_dehyt dTDP 95.0 0.076 1.7E-06 46.7 6.9 32 45-94 1-34 (317)
231 PLN02214 cinnamoyl-CoA reducta 95.0 0.044 9.4E-07 50.3 5.5 36 42-95 9-44 (342)
232 PF13460 NAD_binding_10: NADH( 95.0 0.042 9E-07 45.0 4.9 27 70-96 7-33 (183)
233 PLN02240 UDP-glucose 4-epimera 94.8 0.055 1.2E-06 49.0 5.5 35 42-94 4-38 (352)
234 TIGR02197 heptose_epim ADP-L-g 94.8 0.091 2E-06 46.5 6.8 25 70-94 7-32 (314)
235 CHL00194 ycf39 Ycf39; Provisio 94.8 0.051 1.1E-06 49.1 5.2 35 44-96 1-35 (317)
236 KOG4169 15-hydroxyprostaglandi 94.8 0.12 2.6E-06 46.2 7.3 35 42-94 4-38 (261)
237 PLN02657 3,8-divinyl protochlo 94.7 0.053 1.1E-06 51.1 5.4 37 42-96 59-95 (390)
238 PLN03209 translocon at the inn 94.7 0.052 1.1E-06 54.1 5.4 36 42-95 79-114 (576)
239 PLN00141 Tic62-NAD(P)-related 94.7 0.062 1.3E-06 46.8 5.3 36 42-95 16-51 (251)
240 PRK08017 oxidoreductase; Provi 94.6 0.061 1.3E-06 46.2 5.2 34 44-95 3-36 (256)
241 PRK07424 bifunctional sterol d 94.6 0.058 1.3E-06 51.5 5.4 36 42-95 177-212 (406)
242 PRK07023 short chain dehydroge 94.6 0.057 1.2E-06 46.3 4.9 34 44-95 2-35 (243)
243 PRK09009 C factor cell-cell si 94.6 0.18 4E-06 42.8 8.0 32 44-93 1-34 (235)
244 PRK06300 enoyl-(acyl carrier p 94.6 0.057 1.2E-06 49.2 5.1 36 42-93 7-42 (299)
245 PLN02206 UDP-glucuronate decar 94.5 0.064 1.4E-06 51.5 5.5 35 42-94 118-152 (442)
246 PRK05884 short chain dehydroge 94.4 0.071 1.5E-06 45.7 5.0 32 45-94 2-33 (223)
247 PLN02260 probable rhamnose bio 94.1 0.15 3.2E-06 51.1 7.3 31 42-90 379-409 (668)
248 PLN02427 UDP-apiose/xylose syn 94.0 0.1 2.2E-06 48.5 5.5 36 42-95 13-49 (386)
249 PLN00016 RNA-binding protein; 93.9 0.071 1.5E-06 49.5 4.3 37 42-96 51-91 (378)
250 TIGR03589 PseB UDP-N-acetylglu 93.9 0.094 2E-06 47.7 5.1 35 42-94 3-39 (324)
251 PRK06953 short chain dehydroge 93.9 0.096 2.1E-06 44.4 4.7 33 44-94 2-34 (222)
252 TIGR03649 ergot_EASG ergot alk 93.8 0.092 2E-06 46.3 4.6 27 70-96 8-34 (285)
253 TIGR01214 rmlD dTDP-4-dehydror 93.8 0.085 1.8E-06 46.3 4.3 32 45-94 1-32 (287)
254 PF01370 Epimerase: NAD depend 93.7 0.14 3E-06 43.1 5.3 27 70-96 7-33 (236)
255 PLN02166 dTDP-glucose 4,6-dehy 93.5 0.13 2.8E-06 49.4 5.4 35 42-94 119-153 (436)
256 PF02719 Polysacc_synt_2: Poly 93.4 0.22 4.7E-06 45.8 6.5 31 46-94 1-32 (293)
257 PRK10675 UDP-galactose-4-epime 93.4 0.15 3.2E-06 45.9 5.3 33 44-94 1-33 (338)
258 PRK10217 dTDP-glucose 4,6-dehy 93.3 0.12 2.7E-06 46.9 4.7 33 44-94 2-34 (355)
259 PRK14194 bifunctional 5,10-met 93.2 0.56 1.2E-05 43.3 8.8 65 8-95 127-193 (301)
260 KOG1199 Short-chain alcohol de 93.1 0.52 1.1E-05 40.8 7.9 37 42-96 8-44 (260)
261 PRK08219 short chain dehydroge 93.1 0.15 3.3E-06 42.7 4.7 34 43-95 3-36 (227)
262 PRK14982 acyl-ACP reductase; P 92.9 0.41 8.8E-06 44.9 7.6 37 38-94 152-190 (340)
263 PLN02725 GDP-4-keto-6-deoxyman 92.9 0.18 4E-06 44.4 5.0 23 70-92 6-28 (306)
264 COG0451 WcaG Nucleoside-diphos 92.8 0.19 4.1E-06 44.2 5.1 34 45-96 2-35 (314)
265 PRK11150 rfaD ADP-L-glycero-D- 92.8 0.17 3.7E-06 45.1 4.8 31 46-94 2-32 (308)
266 TIGR02813 omega_3_PfaA polyket 92.7 0.8 1.7E-05 53.1 10.8 38 56-94 1993-2031(2582)
267 cd01078 NAD_bind_H4MPT_DH NADP 92.6 0.46 1E-05 40.0 6.9 35 42-94 27-61 (194)
268 TIGR01777 yfcH conserved hypot 92.4 0.2 4.3E-06 43.7 4.6 27 70-96 7-33 (292)
269 PRK12446 undecaprenyldiphospho 92.4 0.19 4.2E-06 46.7 4.7 40 44-97 2-41 (352)
270 COG1091 RfbD dTDP-4-dehydrorha 92.0 0.35 7.6E-06 44.2 5.8 31 45-94 2-32 (281)
271 PF07993 NAD_binding_4: Male s 91.8 0.082 1.8E-06 46.2 1.4 28 69-96 4-33 (249)
272 PRK11908 NAD-dependent epimera 91.7 0.3 6.4E-06 44.5 5.0 33 44-94 2-35 (347)
273 PRK14179 bifunctional 5,10-met 91.2 1.1 2.3E-05 41.1 8.1 65 7-94 125-191 (284)
274 PRK14175 bifunctional 5,10-met 91.2 1.2 2.6E-05 40.8 8.4 64 8-94 126-191 (286)
275 PF03033 Glyco_transf_28: Glyc 91.2 0.21 4.6E-06 39.0 3.1 35 46-94 1-35 (139)
276 PRK14188 bifunctional 5,10-met 91.1 1.5 3.2E-05 40.4 8.9 63 8-93 126-190 (296)
277 COG3967 DltE Short-chain dehyd 91.1 0.36 7.7E-06 42.8 4.6 36 42-95 4-39 (245)
278 TIGR01179 galE UDP-glucose-4-e 90.9 0.38 8.3E-06 42.4 4.8 31 45-93 1-31 (328)
279 COG2910 Putative NADH-flavin r 90.8 0.25 5.4E-06 42.9 3.3 32 69-100 8-39 (211)
280 PRK08309 short chain dehydroge 90.8 0.46 1E-05 40.1 5.0 32 44-94 1-32 (177)
281 TIGR01746 Thioester-redct thio 90.8 0.38 8.2E-06 43.0 4.7 27 70-96 8-36 (367)
282 PF05368 NmrA: NmrA-like famil 90.7 0.39 8.5E-06 41.1 4.6 26 70-95 7-32 (233)
283 COG0702 Predicted nucleoside-d 89.9 0.49 1.1E-05 40.7 4.5 36 44-97 1-36 (275)
284 PRK10084 dTDP-glucose 4,6 dehy 89.7 0.54 1.2E-05 42.7 4.8 31 44-92 1-31 (352)
285 COG1089 Gmd GDP-D-mannose dehy 89.7 1.1 2.4E-05 41.5 6.7 37 43-97 2-38 (345)
286 PRK06718 precorrin-2 dehydroge 89.0 0.77 1.7E-05 39.6 5.0 33 42-93 9-41 (202)
287 KOG1207 Diacetyl reductase/L-x 88.9 2 4.3E-05 37.4 7.3 36 42-95 6-41 (245)
288 COG1249 Lpd Pyruvate/2-oxoglut 88.8 1.1 2.4E-05 43.5 6.5 55 43-99 136-210 (454)
289 PRK12320 hypothetical protein; 88.7 0.66 1.4E-05 47.4 5.1 33 44-94 1-33 (699)
290 PRK14106 murD UDP-N-acetylmura 88.7 0.84 1.8E-05 43.2 5.5 34 42-94 4-37 (450)
291 PRK06719 precorrin-2 dehydroge 88.6 0.85 1.8E-05 37.8 4.8 32 42-92 12-43 (157)
292 COG3320 Putative dehydrogenase 88.5 1.8 4E-05 41.2 7.4 35 44-96 1-36 (382)
293 COG1090 Predicted nucleoside-d 88.3 0.6 1.3E-05 42.8 4.0 27 70-96 7-33 (297)
294 cd01080 NAD_bind_m-THF_DH_Cycl 88.2 2 4.4E-05 36.1 6.9 52 19-94 25-77 (168)
295 PRK14191 bifunctional 5,10-met 88.0 3.9 8.5E-05 37.5 9.2 66 6-94 123-190 (285)
296 cd01075 NAD_bind_Leu_Phe_Val_D 87.9 2.9 6.3E-05 35.8 7.9 35 37-92 24-58 (200)
297 KOG1371 UDP-glucose 4-epimeras 87.7 0.62 1.3E-05 43.6 3.8 33 43-93 2-34 (343)
298 PLN02260 probable rhamnose bio 87.3 0.96 2.1E-05 45.3 5.2 35 42-94 5-41 (668)
299 COG1087 GalE UDP-glucose 4-epi 87.1 0.95 2.1E-05 42.1 4.6 33 44-94 1-33 (329)
300 PF13241 NAD_binding_7: Putati 87.0 0.78 1.7E-05 35.0 3.5 34 42-94 6-39 (103)
301 PRK05865 hypothetical protein; 86.8 1 2.2E-05 47.1 5.2 33 44-94 1-33 (854)
302 PRK07201 short chain dehydroge 86.3 1 2.2E-05 44.5 4.7 34 44-95 1-36 (657)
303 PF12242 Eno-Rase_NADH_b: NAD( 86.1 1.7 3.7E-05 32.4 4.6 32 43-93 39-72 (78)
304 PRK14170 bifunctional 5,10-met 85.9 4.3 9.4E-05 37.2 8.2 65 7-94 124-190 (284)
305 TIGR01133 murG undecaprenyldip 85.3 1.3 2.9E-05 39.6 4.6 39 44-96 1-39 (348)
306 PRK10792 bifunctional 5,10-met 85.1 5.8 0.00013 36.4 8.6 64 8-94 127-192 (285)
307 PF00070 Pyr_redox: Pyridine n 84.7 2.1 4.6E-05 30.7 4.6 29 70-98 7-35 (80)
308 PRK06849 hypothetical protein; 84.7 1.9 4E-05 40.3 5.4 35 42-94 3-37 (389)
309 PRK14183 bifunctional 5,10-met 84.3 6 0.00013 36.2 8.3 65 7-94 124-190 (281)
310 PF02737 3HCDH_N: 3-hydroxyacy 84.0 1.3 2.8E-05 37.3 3.7 25 70-94 7-31 (180)
311 KOG1200 Mitochondrial/plastidi 84.0 1.7 3.6E-05 38.4 4.4 37 42-96 13-49 (256)
312 PLN02996 fatty acyl-CoA reduct 83.8 1.6 3.5E-05 42.5 4.7 37 42-96 10-49 (491)
313 PRK14176 bifunctional 5,10-met 83.3 7.2 0.00016 35.8 8.5 64 8-94 132-197 (287)
314 cd05212 NAD_bind_m-THF_DH_Cycl 82.4 7 0.00015 31.9 7.3 54 18-94 8-61 (140)
315 KOG1372 GDP-mannose 4,6 dehydr 82.1 1.7 3.7E-05 39.7 3.8 37 42-96 27-63 (376)
316 PRK14186 bifunctional 5,10-met 81.9 8.8 0.00019 35.4 8.5 64 8-94 126-191 (297)
317 PRK02472 murD UDP-N-acetylmura 81.5 2.4 5.3E-05 40.1 4.9 34 42-94 4-37 (447)
318 TIGR01915 npdG NADPH-dependent 80.8 3.4 7.4E-05 35.6 5.2 25 70-94 9-33 (219)
319 PLN02503 fatty acyl-CoA reduct 80.8 2.2 4.8E-05 42.9 4.6 37 42-96 118-157 (605)
320 PRK14181 bifunctional 5,10-met 80.6 12 0.00025 34.5 8.8 64 8-94 120-190 (287)
321 PRK14169 bifunctional 5,10-met 80.4 11 0.00024 34.5 8.6 64 8-94 124-189 (282)
322 KOG1429 dTDP-glucose 4-6-dehyd 80.3 2.8 6.2E-05 38.9 4.6 35 42-94 26-60 (350)
323 PRK14166 bifunctional 5,10-met 80.2 11 0.00024 34.5 8.5 65 7-94 123-190 (282)
324 PRK14177 bifunctional 5,10-met 79.9 12 0.00025 34.4 8.5 64 8-94 127-192 (284)
325 TIGR01470 cysG_Nterm siroheme 79.9 3.9 8.6E-05 35.3 5.3 34 42-94 8-41 (205)
326 PLN02616 tetrahydrofolate dehy 79.7 12 0.00025 35.6 8.7 54 18-94 211-264 (364)
327 PRK14182 bifunctional 5,10-met 79.6 13 0.00027 34.1 8.6 66 6-94 122-190 (282)
328 PRK14173 bifunctional 5,10-met 79.4 12 0.00026 34.4 8.5 65 7-94 122-188 (287)
329 COG0623 FabI Enoyl-[acyl-carri 79.0 25 0.00054 31.8 10.0 38 42-95 5-42 (259)
330 PF02882 THF_DHG_CYH_C: Tetrah 78.9 5 0.00011 33.6 5.4 55 18-95 16-70 (160)
331 PRK07819 3-hydroxybutyryl-CoA 78.6 3 6.6E-05 37.7 4.3 34 61-94 4-37 (286)
332 PF03446 NAD_binding_2: NAD bi 78.4 3 6.5E-05 34.2 3.9 25 70-94 9-33 (163)
333 PRK14190 bifunctional 5,10-met 78.3 15 0.00032 33.8 8.6 65 7-94 125-191 (284)
334 PRK14178 bifunctional 5,10-met 77.8 13 0.00029 33.9 8.2 64 8-94 120-185 (279)
335 PRK06444 prephenate dehydrogen 77.7 3.4 7.3E-05 35.7 4.2 20 70-89 9-28 (197)
336 PRK14180 bifunctional 5,10-met 77.4 16 0.00034 33.5 8.6 54 18-94 138-191 (282)
337 PRK14172 bifunctional 5,10-met 77.1 13 0.00029 33.9 8.0 65 7-94 125-191 (278)
338 PRK14192 bifunctional 5,10-met 77.0 12 0.00025 34.2 7.6 52 19-93 140-191 (283)
339 PRK00258 aroE shikimate 5-dehy 76.8 5.7 0.00012 35.6 5.5 25 70-94 131-156 (278)
340 PRK14187 bifunctional 5,10-met 76.5 16 0.00035 33.7 8.4 64 8-94 126-193 (294)
341 PF03807 F420_oxidored: NADP o 76.4 4 8.7E-05 29.9 3.8 24 70-93 7-33 (96)
342 KOG1430 C-3 sterol dehydrogena 76.2 4.3 9.4E-05 38.4 4.7 36 42-95 3-40 (361)
343 cd03785 GT1_MurG MurG is an N- 76.0 4.2 9.2E-05 36.3 4.5 38 45-96 1-38 (350)
344 PLN02516 methylenetetrahydrofo 75.3 19 0.00041 33.3 8.5 54 18-94 147-200 (299)
345 PRK14171 bifunctional 5,10-met 74.9 18 0.00039 33.3 8.3 54 18-94 139-192 (288)
346 PF01210 NAD_Gly3P_dh_N: NAD-d 74.8 3.1 6.8E-05 34.0 3.1 27 69-95 6-32 (157)
347 TIGR00715 precor6x_red precorr 74.8 4.9 0.00011 36.1 4.5 33 44-95 1-33 (256)
348 cd00674 LysRS_core_class_I cat 74.6 11 0.00024 35.5 7.1 53 43-100 18-70 (353)
349 PRK12548 shikimate 5-dehydroge 74.5 6 0.00013 35.8 5.1 24 71-94 135-159 (289)
350 COG4821 Uncharacterized protei 74.3 7.2 0.00016 34.4 5.3 54 22-93 86-139 (243)
351 PRK14189 bifunctional 5,10-met 74.3 19 0.00042 33.0 8.3 54 18-94 138-191 (285)
352 PRK07334 threonine dehydratase 74.0 39 0.00085 32.0 10.7 28 68-95 77-104 (403)
353 PLN02970 serine racemase 73.7 24 0.00053 32.4 9.0 28 68-95 81-108 (328)
354 PRK14193 bifunctional 5,10-met 73.2 22 0.00048 32.6 8.4 64 8-94 126-193 (284)
355 PRK07066 3-hydroxybutyryl-CoA 72.6 4.7 0.0001 37.4 4.0 33 62-94 7-39 (321)
356 PRK11199 tyrA bifunctional cho 72.4 5.7 0.00012 37.4 4.6 25 70-94 107-131 (374)
357 KOG1478 3-keto sterol reductas 71.8 17 0.00038 33.4 7.3 28 42-87 2-29 (341)
358 PLN02520 bifunctional 3-dehydr 71.1 15 0.00032 36.3 7.3 34 42-94 378-411 (529)
359 PRK06129 3-hydroxyacyl-CoA deh 71.1 4.8 0.0001 36.5 3.6 25 70-94 10-34 (308)
360 TIGR02853 spore_dpaA dipicolin 70.6 9.8 0.00021 34.5 5.5 34 42-94 150-183 (287)
361 TIGR00467 lysS_arch lysyl-tRNA 70.0 12 0.00027 37.0 6.4 53 44-101 18-70 (515)
362 cd01079 NAD_bind_m-THF_DH NAD 69.8 35 0.00077 29.7 8.5 59 18-96 33-97 (197)
363 COG2085 Predicted dinucleotide 69.5 5.5 0.00012 35.0 3.5 27 69-95 8-34 (211)
364 PRK00726 murG undecaprenyldiph 69.2 8.4 0.00018 34.8 4.8 22 75-96 19-40 (357)
365 PRK06115 dihydrolipoamide dehy 68.4 16 0.00035 35.1 6.8 56 44-99 138-211 (466)
366 cd02071 MM_CoA_mut_B12_BD meth 68.2 37 0.00081 26.5 7.8 71 73-180 14-85 (122)
367 cd01134 V_A-ATPase_A V/A-type 68.2 9.5 0.00021 36.3 5.0 25 70-94 238-262 (369)
368 PRK14619 NAD(P)H-dependent gly 66.9 7.5 0.00016 35.3 4.0 26 70-95 12-37 (308)
369 cd01065 NAD_bind_Shikimate_DH 66.6 14 0.00031 29.2 5.2 25 70-94 27-52 (155)
370 PRK00750 lysK lysyl-tRNA synth 66.5 20 0.00042 35.4 7.0 52 44-100 23-74 (510)
371 cd01562 Thr-dehyd Threonine de 66.5 40 0.00086 30.1 8.6 28 68-95 71-98 (304)
372 KOG1610 Corticosteroid 11-beta 66.3 16 0.00034 34.2 5.9 33 42-92 28-60 (322)
373 COG0569 TrkA K+ transport syst 66.2 6.8 0.00015 34.2 3.5 27 70-96 8-34 (225)
374 PRK08655 prephenate dehydrogen 66.1 11 0.00024 36.3 5.1 25 70-94 9-33 (437)
375 PRK06382 threonine dehydratase 66.1 63 0.0014 30.7 10.2 28 68-95 79-106 (406)
376 PRK14167 bifunctional 5,10-met 66.0 37 0.0008 31.3 8.3 64 8-94 125-194 (297)
377 PRK01438 murD UDP-N-acetylmura 65.9 14 0.00031 35.3 6.0 34 42-94 15-48 (480)
378 PF02558 ApbA: Ketopantoate re 65.9 7.6 0.00016 30.8 3.4 26 70-95 6-31 (151)
379 PRK07048 serine/threonine dehy 65.8 39 0.00085 30.8 8.5 28 68-95 78-105 (321)
380 PLN02545 3-hydroxybutyryl-CoA 65.5 7.4 0.00016 34.9 3.6 25 70-94 12-36 (295)
381 PRK00711 D-amino acid dehydrog 65.4 12 0.00026 34.7 5.1 24 71-94 9-32 (416)
382 PRK03525 crotonobetainyl-CoA:c 65.2 29 0.00062 33.1 7.7 37 56-95 11-47 (405)
383 PRK14618 NAD(P)H-dependent gly 65.2 7.7 0.00017 35.3 3.8 25 70-94 12-36 (328)
384 cd01132 F1_ATPase_alpha F1 ATP 65.2 18 0.00038 33.1 6.0 43 44-94 127-169 (274)
385 cd01449 TST_Repeat_2 Thiosulfa 64.9 31 0.00067 26.0 6.6 24 70-93 87-111 (118)
386 PRK09260 3-hydroxybutyryl-CoA 64.9 7.6 0.00016 34.7 3.6 25 70-94 9-33 (288)
387 TIGR02279 PaaC-3OHAcCoADH 3-hy 64.9 7.3 0.00016 38.3 3.7 25 70-94 13-37 (503)
388 COG1157 FliI Flagellar biosynt 64.7 9.6 0.00021 37.0 4.3 58 29-94 204-261 (441)
389 PRK14569 D-alanyl-alanine synt 64.7 11 0.00024 34.0 4.6 41 42-93 3-43 (296)
390 TIGR00507 aroE shikimate 5-deh 64.4 14 0.00031 32.8 5.3 25 70-94 125-149 (270)
391 KOG2304 3-hydroxyacyl-CoA dehy 64.3 5.5 0.00012 36.0 2.5 36 61-96 10-45 (298)
392 PF13738 Pyr_redox_3: Pyridine 64.1 13 0.00027 30.6 4.6 25 70-94 175-199 (203)
393 PRK14185 bifunctional 5,10-met 64.1 45 0.00096 30.8 8.4 65 8-95 125-195 (293)
394 COG0707 MurG UDP-N-acetylgluco 64.0 11 0.00023 35.6 4.5 37 44-94 1-38 (357)
395 PRK14168 bifunctional 5,10-met 63.9 41 0.00089 31.1 8.2 65 7-94 126-198 (297)
396 PRK14184 bifunctional 5,10-met 63.3 47 0.001 30.5 8.4 64 8-94 125-194 (286)
397 PRK06130 3-hydroxybutyryl-CoA 63.1 12 0.00025 33.8 4.5 26 69-94 11-36 (311)
398 PRK06035 3-hydroxyacyl-CoA deh 62.9 11 0.00024 33.8 4.3 27 68-94 9-35 (291)
399 TIGR00215 lpxB lipid-A-disacch 62.7 6.8 0.00015 36.7 3.0 37 44-95 6-42 (385)
400 PF01488 Shikimate_DH: Shikima 62.7 20 0.00044 28.5 5.4 25 70-94 20-45 (135)
401 PRK08293 3-hydroxybutyryl-CoA 62.6 9.5 0.00021 34.2 3.8 25 70-94 11-35 (287)
402 PRK06815 hypothetical protein; 62.2 59 0.0013 29.6 9.0 31 64-95 71-101 (317)
403 TIGR01127 ilvA_1Cterm threonin 62.1 75 0.0016 29.6 9.8 27 69-95 55-81 (380)
404 cd02006 TPP_Gcl Thiamine pyrop 62.0 26 0.00056 29.7 6.2 71 20-98 8-88 (202)
405 cd08259 Zn_ADH5 Alcohol dehydr 61.5 18 0.00039 31.8 5.3 35 42-94 162-196 (332)
406 COG4982 3-oxoacyl-[acyl-carrie 61.2 29 0.00062 35.7 7.0 38 42-96 395-432 (866)
407 PF01113 DapB_N: Dihydrodipico 61.1 18 0.00039 28.4 4.7 31 63-93 2-33 (124)
408 cd08295 double_bond_reductase_ 60.6 19 0.0004 32.4 5.4 35 42-94 151-185 (338)
409 COG1250 FadB 3-hydroxyacyl-CoA 60.5 7.3 0.00016 36.1 2.7 26 69-94 10-35 (307)
410 cd08253 zeta_crystallin Zeta-c 60.5 20 0.00043 31.0 5.3 35 42-94 144-178 (325)
411 PRK12428 3-alpha-hydroxysteroi 60.4 16 0.00034 31.3 4.7 19 77-95 1-19 (241)
412 PRK09754 phenylpropionate diox 60.3 18 0.00039 33.7 5.4 27 71-97 153-179 (396)
413 PRK07530 3-hydroxybutyryl-CoA 59.8 15 0.00032 32.9 4.5 25 70-94 12-36 (292)
414 PF01266 DAO: FAD dependent ox 59.6 13 0.00027 32.9 4.0 25 70-94 7-31 (358)
415 TIGR01505 tartro_sem_red 2-hyd 59.5 10 0.00022 33.8 3.5 25 70-94 7-31 (291)
416 PRK06370 mercuric reductase; V 59.5 20 0.00044 34.1 5.7 58 42-99 133-208 (463)
417 PLN02897 tetrahydrofolate dehy 59.5 35 0.00075 32.3 7.0 54 18-94 194-247 (345)
418 TIGR02824 quinone_pig3 putativ 59.2 21 0.00046 30.8 5.3 35 42-94 139-173 (325)
419 TIGR01041 ATP_syn_B_arch ATP s 59.1 19 0.00041 35.2 5.4 44 43-94 202-246 (458)
420 PRK06522 2-dehydropantoate 2-r 59.0 11 0.00023 33.4 3.5 25 70-94 8-32 (304)
421 COG1648 CysG Siroheme synthase 59.0 19 0.00041 31.4 4.9 35 42-95 11-45 (210)
422 cd02070 corrinoid_protein_B12- 58.9 1.1E+02 0.0024 25.9 10.9 20 73-92 97-117 (201)
423 PRK12831 putative oxidoreducta 58.7 18 0.00039 34.9 5.2 35 42-95 280-314 (464)
424 PRK00094 gpsA NAD(P)H-dependen 58.7 12 0.00027 33.4 3.8 25 70-94 9-33 (325)
425 PRK04308 murD UDP-N-acetylmura 58.6 21 0.00045 33.9 5.5 34 42-94 4-37 (445)
426 cd03113 CTGs CTP synthetase (C 58.6 18 0.00039 32.7 4.7 37 44-92 1-37 (255)
427 cd02013 TPP_Xsc_like Thiamine 58.5 26 0.00057 29.6 5.6 71 19-98 3-84 (196)
428 PRK05808 3-hydroxybutyryl-CoA 58.3 12 0.00025 33.4 3.6 25 70-94 11-35 (282)
429 PRK14620 NAD(P)H-dependent gly 58.1 12 0.00027 33.9 3.8 25 70-94 8-32 (326)
430 PRK09288 purT phosphoribosylgl 58.0 21 0.00046 33.0 5.4 34 42-94 11-44 (395)
431 PRK08268 3-hydroxy-acyl-CoA de 57.8 14 0.00031 36.3 4.4 26 69-94 14-39 (507)
432 PRK05562 precorrin-2 dehydroge 57.2 22 0.00048 31.4 5.1 34 42-94 24-57 (223)
433 cd05276 p53_inducible_oxidored 57.2 23 0.0005 30.5 5.2 35 42-94 139-173 (323)
434 PF13450 NAD_binding_8: NAD(P) 57.2 23 0.0005 24.9 4.3 27 70-96 4-30 (68)
435 PF00670 AdoHcyase_NAD: S-aden 57.1 48 0.001 27.9 6.8 48 23-93 7-54 (162)
436 PRK11259 solA N-methyltryptoph 57.1 13 0.00027 33.9 3.7 24 71-94 12-35 (376)
437 PF03853 YjeF_N: YjeF-related 56.7 38 0.00082 28.1 6.2 36 42-92 24-59 (169)
438 PRK08198 threonine dehydratase 56.7 1.1E+02 0.0023 28.8 10.0 28 68-95 76-103 (404)
439 cd01561 CBS_like CBS_like: Thi 56.6 1.3E+02 0.0028 26.8 10.1 27 69-95 60-86 (291)
440 PRK08229 2-dehydropantoate 2-r 56.5 11 0.00024 34.2 3.2 25 70-94 10-34 (341)
441 COG0190 FolD 5,10-methylene-te 56.5 35 0.00076 31.4 6.3 55 18-95 136-190 (283)
442 TIGR02825 B4_12hDH leukotriene 56.4 24 0.00053 31.4 5.3 35 42-94 138-172 (325)
443 COG2894 MinD Septum formation 56.4 13 0.00029 33.4 3.5 43 43-98 2-44 (272)
444 KOG1203 Predicted dehydrogenas 56.4 16 0.00034 35.4 4.2 27 70-96 88-114 (411)
445 TIGR01692 HIBADH 3-hydroxyisob 56.2 13 0.00029 33.2 3.6 25 70-94 4-28 (288)
446 cd01135 V_A-ATPase_B V/A-type 56.1 26 0.00056 32.1 5.4 44 43-94 130-174 (276)
447 cd02010 TPP_ALS Thiamine pyrop 56.0 30 0.00065 28.8 5.5 54 44-98 15-79 (177)
448 PRK06467 dihydrolipoamide dehy 55.7 24 0.00052 33.9 5.5 30 70-99 182-211 (471)
449 PRK04965 NADH:flavorubredoxin 55.5 26 0.00057 32.3 5.5 29 70-98 149-177 (377)
450 PRK07531 bifunctional 3-hydrox 55.3 13 0.00029 36.2 3.7 25 70-94 12-36 (495)
451 TIGR01275 ACC_deam_rel pyridox 55.2 21 0.00045 32.3 4.7 38 42-95 54-91 (311)
452 PRK06416 dihydrolipoamide dehy 55.1 27 0.00058 33.2 5.6 58 42-99 134-209 (462)
453 PRK15461 NADH-dependent gamma- 55.0 14 0.00031 33.3 3.6 25 70-94 9-33 (296)
454 PRK13512 coenzyme A disulfide 54.6 23 0.0005 33.7 5.1 29 71-99 157-185 (438)
455 cd08268 MDR2 Medium chain dehy 54.5 27 0.00059 30.2 5.2 35 42-94 144-178 (328)
456 PLN02723 3-mercaptopyruvate su 54.4 45 0.00097 30.6 6.8 64 7-94 239-303 (320)
457 KOG1252 Cystathionine beta-syn 54.3 47 0.001 31.5 6.9 36 47-92 99-134 (362)
458 PRK07417 arogenate dehydrogena 54.3 16 0.00034 32.6 3.7 25 70-94 8-32 (279)
459 PRK03910 D-cysteine desulfhydr 54.2 23 0.0005 32.5 4.9 27 69-95 73-99 (331)
460 TIGR01421 gluta_reduc_1 glutat 54.2 27 0.00058 33.4 5.5 29 70-98 174-202 (450)
461 PRK12266 glpD glycerol-3-phosp 54.1 20 0.00044 34.9 4.7 24 71-94 15-38 (508)
462 TIGR02437 FadB fatty oxidation 53.9 15 0.00033 37.7 3.9 34 61-94 312-345 (714)
463 COG1798 DPH5 Diphthamide biosy 53.6 34 0.00074 31.0 5.6 69 8-95 45-113 (260)
464 cd08294 leukotriene_B4_DH_like 53.5 30 0.00065 30.5 5.4 35 42-94 143-177 (329)
465 cd02002 TPP_BFDC Thiamine pyro 53.4 46 0.001 27.2 6.2 37 61-98 40-80 (178)
466 cd05288 PGDH Prostaglandin deh 53.4 29 0.00064 30.6 5.3 35 42-94 145-179 (329)
467 PRK07846 mycothione reductase; 53.3 30 0.00064 33.2 5.7 58 42-99 128-203 (451)
468 PRK05249 soluble pyridine nucl 53.1 31 0.00066 32.7 5.7 58 42-99 137-212 (461)
469 cd01133 F1-ATPase_beta F1 ATP 53.0 26 0.00057 31.9 4.9 44 43-94 127-171 (274)
470 COG0452 Dfp Phosphopantothenoy 53.0 0.92 2E-05 43.3 -4.7 53 44-96 80-132 (392)
471 COG2072 TrkA Predicted flavopr 52.9 23 0.00049 34.1 4.8 36 42-96 174-209 (443)
472 COG0075 Serine-pyruvate aminot 52.8 37 0.0008 32.5 6.1 70 21-94 35-112 (383)
473 TIGR01316 gltA glutamate synth 52.7 26 0.00057 33.5 5.2 36 42-96 271-306 (449)
474 PRK07476 eutB threonine dehydr 52.6 53 0.0011 30.0 7.0 26 69-94 74-99 (322)
475 CHL00059 atpA ATP synthase CF1 52.5 18 0.00039 35.6 4.1 44 43-94 198-241 (485)
476 PRK04196 V-type ATP synthase s 52.5 29 0.00064 33.9 5.5 44 43-94 204-248 (460)
477 cd08266 Zn_ADH_like1 Alcohol d 52.5 32 0.0007 30.0 5.4 35 42-94 166-200 (342)
478 COG1433 Uncharacterized conser 52.4 17 0.00037 29.2 3.2 34 61-95 38-75 (121)
479 cd08292 ETR_like_2 2-enoyl thi 52.3 30 0.00066 30.3 5.2 36 42-95 139-174 (324)
480 PRK14031 glutamate dehydrogena 52.3 55 0.0012 32.0 7.3 48 25-93 211-259 (444)
481 cd06449 ACCD Aminocyclopropane 52.2 30 0.00064 31.3 5.2 38 42-95 50-87 (307)
482 KOG0409 Predicted dehydrogenas 52.0 14 0.00031 34.4 3.1 34 60-96 36-69 (327)
483 PRK11730 fadB multifunctional 51.9 16 0.00036 37.4 3.8 34 61-94 312-345 (715)
484 PRK08526 threonine dehydratase 51.7 1.8E+02 0.0039 27.8 10.6 28 68-95 74-101 (403)
485 PF00208 ELFV_dehydrog: Glutam 51.3 38 0.00081 30.1 5.6 25 70-94 40-64 (244)
486 PRK04148 hypothetical protein; 51.2 39 0.00084 27.6 5.2 24 70-94 25-48 (134)
487 TIGR00872 gnd_rel 6-phosphoglu 51.2 19 0.00041 32.5 3.8 25 70-94 8-32 (298)
488 COG2084 MmsB 3-hydroxyisobutyr 51.1 17 0.00037 33.4 3.4 27 70-96 8-34 (286)
489 COG1484 DnaC DNA replication p 51.0 70 0.0015 28.4 7.3 63 12-94 78-142 (254)
490 PRK08972 fliI flagellum-specif 51.0 28 0.0006 34.0 5.0 44 43-94 217-260 (444)
491 TIGR00873 gnd 6-phosphoglucona 50.4 18 0.00038 35.4 3.6 26 70-95 7-32 (467)
492 PTZ00142 6-phosphogluconate de 50.2 18 0.00039 35.4 3.6 27 70-96 9-35 (470)
493 PRK13369 glycerol-3-phosphate 50.0 25 0.00055 34.1 4.7 24 71-94 15-38 (502)
494 PRK14174 bifunctional 5,10-met 50.0 1.1E+02 0.0025 28.1 8.6 64 8-94 125-196 (295)
495 TIGR03443 alpha_am_amid L-amin 49.8 24 0.00052 38.2 4.9 36 43-96 971-1010(1389)
496 PRK06475 salicylate hydroxylas 49.8 32 0.0007 31.9 5.2 27 71-97 11-37 (400)
497 COG0031 CysK Cysteine synthase 49.7 18 0.0004 33.4 3.4 26 68-93 68-93 (300)
498 PRK12409 D-amino acid dehydrog 49.6 20 0.00043 33.3 3.8 25 70-94 9-33 (410)
499 PRK12390 1-aminocyclopropane-1 49.6 32 0.00069 31.6 5.0 37 42-94 65-101 (337)
500 PRK09599 6-phosphogluconate de 49.4 21 0.00045 32.2 3.8 25 70-94 8-32 (301)
No 1
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=100.00 E-value=1.1e-60 Score=417.20 Aligned_cols=227 Identities=47% Similarity=0.722 Sum_probs=201.5
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 026403 12 FFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (239)
Q Consensus 12 f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (239)
||..++.++.+++.-..+++|+.++..+. .+|+|+||||||.+|+++|+||||||||+|+||++.||+|++.||.|||+
T Consensus 1 ~~~~~p~p~~~~d~~s~~~eFi~~q~s~~-~rrIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl 79 (302)
T KOG2728|consen 1 FFEMNPVPESLDDPGSLIEEFIKLQASLQ-GRRIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFL 79 (302)
T ss_pred CCCcCCCcccccchhHHHHHHHHHHhhcc-CceEEEEecCCeEeecccCceEeeeccCcCCccchhHHHHHhCCceEEEE
Confidence 78999999999999888999999875553 46799999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCccCCCCCcchhhhhhcccCCc--eEEeCcchHH-HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHH
Q 026403 92 YRRGTCEPYCSSLPDDAFLECFEVTEESA--VQVCQPYSEA-VKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVS 168 (239)
Q Consensus 92 ~~~~s~~P~~~~~~~~~~~~~~~~~~~~~--v~v~~~~~~~-~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~ 168 (239)
||..|+.||.|++|.+.++.+++..++.. .-...+.+.. +..+...|+.....+++|+++|+|+.||+++|+++|++
T Consensus 80 ~R~~Sl~Py~R~f~~~~~~~~l~~~g~~~~~~i~~~e~~~~vf~~~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~ 159 (302)
T KOG2728|consen 80 YRERSLFPYTRHFPGQTWFLFLRPSGSALSGLIEKEENALPVFAEALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEA 159 (302)
T ss_pred eeccccccccccCCCchhhhhhccCCcccccceecCchhhHHHHHHHHHHHHHHhhCcEEEEecchHHHHHHHHHHHHHH
Confidence 99999999999999888888887765332 1122223334 45555555544467999999999999999999999999
Q ss_pred hhhcCCcceeehhhhccCCcCCcCccCCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccCC
Q 026403 169 SRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRFS 239 (239)
Q Consensus 169 l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~~ 239 (239)
|+.+++..++++|||||||+||++.+++|||+|+++.+.|+|.++||+|+.++..|.|++++|+||||||+
T Consensus 160 Ln~~~sramfYLAAAVSDFyVP~~~mpeHKIqSg~~~l~i~l~~VPK~L~~Lv~~WaP~AfiiSFKLETDe 230 (302)
T KOG2728|consen 160 LNPLGSRAMFYLAAAVSDFYVPESEMPEHKIQSGSGPLQITLKPVPKMLSPLVSDWAPKAFIISFKLETDE 230 (302)
T ss_pred hccccchHHHHHHHHhcccccChhhcchhhcccCCCCceEEeccchHHHHHHHHhhCcceEEEEEEecCCh
Confidence 99999999999999999999999999999999998999999999999999999999999999999999985
No 2
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=100.00 E-value=7.9e-46 Score=316.07 Aligned_cols=143 Identities=33% Similarity=0.464 Sum_probs=104.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCce
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v 121 (239)
+||+||||||||+|||| |||||||+|||+||++||++|+++||+|++|||+.++.| |. .+
T Consensus 2 ~gk~vlITaG~T~E~iD--~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~-----p~-------------~~ 61 (185)
T PF04127_consen 2 KGKKVLITAGPTREPID--PVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP-----PP-------------GV 61 (185)
T ss_dssp TT-EEEEEESB-EEESS--SSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------T-------------TE
T ss_pred CCCEEEEECCCccccCC--CceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc-----cc-------------cc
Confidence 67999999999999999 999999999999999999999999999999999977553 21 22
Q ss_pred EEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCCcCCcCccCCCCcCC
Q 026403 122 QVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQS 201 (239)
Q Consensus 122 ~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s 201 (239)
++ +.++|.+|+.+.++. .++.+|++|||||||||++ +...++||+|
T Consensus 62 ~~--------------------------i~v~sa~em~~~~~~------~~~~~Di~I~aAAVsDf~p--~~~~~~KIkK 107 (185)
T PF04127_consen 62 KV--------------------------IRVESAEEMLEAVKE------LLPSADIIIMAAAVSDFRP--EEPAEGKIKK 107 (185)
T ss_dssp EE--------------------------EE-SSHHHHHHHHHH------HGGGGSEEEE-SB--SEEE--SCHHSS-G--
T ss_pred eE--------------------------EEecchhhhhhhhcc------ccCcceeEEEecchhheee--hhcccccccc
Confidence 22 233444444444442 2456799999999999997 6778999996
Q ss_pred -CCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccC
Q 026403 202 -GSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRF 238 (239)
Q Consensus 202 -~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~ 238 (239)
+.+.++|+|++|||||+.|++.|+|++++|||||||+
T Consensus 108 ~~~~~l~l~L~~~pkIL~~l~~~~~~~~~lVGFkaEt~ 145 (185)
T PF04127_consen 108 SSGDELTLELKPTPKILAELRKNKKPNQFLVGFKAETE 145 (185)
T ss_dssp -TT-CEEEEEEE-GGHGCCHHHHCSTTTEEEEEEEESC
T ss_pred ccCcceEEEEEeChHHHHHHHhcccCCcEEEEEEecCC
Confidence 4568999999999999999888999999999999985
No 3
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=100.00 E-value=3.5e-42 Score=328.74 Aligned_cols=171 Identities=23% Similarity=0.329 Sum_probs=138.4
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHhcC--CCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEE
Q 026403 12 FFDSAPPLNDRAAISQKLKEFIALN--SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVI 89 (239)
Q Consensus 12 f~~~~~~~~~~~~i~~~v~~~~~~~--~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~ 89 (239)
...+.|||++|++|+.++.+++... ++| .||+||||+|||+|||| |||||||+|||+||++||++++.+||+|+
T Consensus 225 g~~G~Grm~e~~~I~~~v~~~~~~~~~~~l--~gkkvLITaGpT~E~ID--pVR~ItN~SSGkmG~alA~aa~~~GA~Vt 300 (475)
T PRK13982 225 GEAGVGRMAEPLEIAAAAEALLRPPQPKPL--AGRRVLITAGPTHEPID--PVRYIANRSSGKQGFAIAAAAAAAGAEVT 300 (475)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHhhcccccc--CCCEEEEecCCccccCC--cceeeCCCCchHHHHHHHHHHHHCCCcEE
Confidence 4567899999999999999998642 468 88999999999999999 99999999999999999999999999999
Q ss_pred EEecCCCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHh
Q 026403 90 FLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSS 169 (239)
Q Consensus 90 ~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l 169 (239)
+|+|+.++.| |. .++ .+++++ +.+|.+++++
T Consensus 301 lI~Gp~~~~~-----p~--~v~--------~i~V~t--a~eM~~av~~-------------------------------- 331 (475)
T PRK13982 301 LISGPVDLAD-----PQ--GVK--------VIHVES--ARQMLAAVEA-------------------------------- 331 (475)
T ss_pred EEeCCcCCCC-----CC--Cce--------EEEecC--HHHHHHHHHh--------------------------------
Confidence 9999988643 21 111 334443 4555544421
Q ss_pred hhcCCcceeehhhhccCCcCCcCccCCCCcCCCC-CCceEEeEeChhHHHHhhhhc-CCCcEEEEEecccCC
Q 026403 170 RSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGS-GPLDMQLLQVPKMLSVLRKEW-APMAFCISFKMQRFS 239 (239)
Q Consensus 170 ~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~-~~l~l~L~~~PKIl~~i~~~~-~p~~~lVgFKlEt~~ 239 (239)
.+ ++|++|||||||||++ ....++||||++ +.++|+|++|||||+.|++.+ .+.+++||||+||++
T Consensus 332 -~~-~~Di~I~aAAVaDyrp--~~~~~~KiKk~~~~~~~L~L~~nPDIL~~l~~~~~~~~~~lVGFaaEt~~ 399 (475)
T PRK13982 332 -AL-PADIAIFAAAVADWRV--ATEGGQKLKKGAAGPPPLQLVENPDILATISKLAENRPPLVIGFAAETEH 399 (475)
T ss_pred -hC-CCCEEEEeccccceee--ccccccccCcCCCCCceeeeeeCcHHHHHHhhhcccCCCEEEEEccCchh
Confidence 22 3799999999999997 667899999864 457899999999999999642 223699999999963
No 4
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=100.00 E-value=6.5e-39 Score=301.57 Aligned_cols=172 Identities=23% Similarity=0.310 Sum_probs=138.1
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 026403 11 SFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (239)
Q Consensus 11 ~f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (239)
....+.|||+++++|+..+.+.+.+ .++ +||+||||+|||+|||| |||||||+|||+||.++|++|+++||+|++
T Consensus 159 ~~~~g~gr~~~~~~I~~~~~~~~~~-~~l--~gk~vlITgG~T~E~ID--~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 159 CGDVGPGRMAEPEEIVAAAERALSP-KDL--AGKRVLITAGPTREPID--PVRYITNRSSGKMGYALARAAARRGADVTL 233 (399)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHhhh-ccc--CCCEEEEeCCCcccccc--ceeeeccCCcchHHHHHHHHHHHCCCEEEE
Confidence 3445689999999999999998865 468 78999999999999999 999999999999999999999999999999
Q ss_pred EecCCCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhh
Q 026403 91 LYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSR 170 (239)
Q Consensus 91 i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~ 170 (239)
++|+.++.+ |. .+.. +.+++.+|+.+.++ +
T Consensus 234 v~~~~~~~~-----~~-------------~~~~--------------------------~dv~~~~~~~~~v~------~ 263 (399)
T PRK05579 234 VSGPVNLPT-----PA-------------GVKR--------------------------IDVESAQEMLDAVL------A 263 (399)
T ss_pred eCCCccccC-----CC-------------CcEE--------------------------EccCCHHHHHHHHH------H
Confidence 999875432 10 0111 12233333322222 2
Q ss_pred hcCCcceeehhhhccCCcCCcCccCCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccCC
Q 026403 171 SLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRFS 239 (239)
Q Consensus 171 ~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~~ 239 (239)
.++..|++||+|||+||++ ....++||+|+.+.++|+|++|||||+.|++.+.+.+++|||||||++
T Consensus 264 ~~~~~DilI~~Aav~d~~~--~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaEt~~ 330 (399)
T PRK05579 264 ALPQADIFIMAAAVADYRP--ATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAETGD 330 (399)
T ss_pred hcCCCCEEEEccccccccc--ccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccCCch
Confidence 3578999999999999996 678899999975579999999999999999765433489999999973
No 5
>PRK09620 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=281.55 Aligned_cols=146 Identities=25% Similarity=0.361 Sum_probs=112.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCce
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v 121 (239)
.||+||||||||+|||| |||||||+|||+||+++|++|+++||+|++++|+.+..|.. ++. .+
T Consensus 2 ~gk~vlITaG~T~E~iD--~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~--~~~-------------~~ 64 (229)
T PRK09620 2 KGKKVLITSGGCLEKWD--QVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND--INN-------------QL 64 (229)
T ss_pred CCCEEEEeCCCccCCcC--CeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc--cCC-------------ce
Confidence 57999999999999999 99999999999999999999999999999999987633311 110 11
Q ss_pred EEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCCcCCcCccC------
Q 026403 122 QVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMA------ 195 (239)
Q Consensus 122 ~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~------ 195 (239)
. .+.+++..|+.+.++.+ ++ ....|++||+||||||+|+ ...
T Consensus 65 ~--------------------------~~~V~s~~d~~~~l~~~---~~-~~~~D~VIH~AAvsD~~~~--~~~~~~~~~ 112 (229)
T PRK09620 65 E--------------------------LHPFEGIIDLQDKMKSI---IT-HEKVDAVIMAAAGSDWVVD--KICDQEGNV 112 (229)
T ss_pred e--------------------------EEEEecHHHHHHHHHHH---hc-ccCCCEEEECccccceecc--ccccccccc
Confidence 1 11233333443333322 21 2367999999999999973 322
Q ss_pred ---CCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccC
Q 026403 196 ---EHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRF 238 (239)
Q Consensus 196 ---~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~ 238 (239)
++||+|+ +.++|+|++|||||+.+++ |.|++++|||||||+
T Consensus 113 ~~~~~Ki~~~-~~~~l~L~~~pdIl~~l~~-~~~~~~~vGFkaEt~ 156 (229)
T PRK09620 113 LDMNGKISSD-IAPIIHFQKAPKVLKQIKQ-WDPETVLVGFKLESD 156 (229)
T ss_pred ccccCCCcCC-CCCeEEEEECcHHHHHHHh-hCCCCEEEEEEeccC
Confidence 3599875 5689999999999999985 678899999999997
No 6
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=100.00 E-value=4.2e-38 Score=295.24 Aligned_cols=170 Identities=25% Similarity=0.315 Sum_probs=136.3
Q ss_pred hcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 14 DSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 14 ~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.+.++|+++++|+..+.+.+....++ .||+||||+|||+|||| |||||||+|||+||.++|++|+.+||+|++++|
T Consensus 158 ~g~g~~~~~~~i~~~v~~~~~~~~~~--~~~~vlit~g~t~E~iD--~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g 233 (390)
T TIGR00521 158 EGKGRLAEPETIVKAAEREFSPKEDL--EGKRVLITAGPTREPID--PVRFISNLSSGKMGLALAEAAYKRGADVTLITG 233 (390)
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcccc--CCceEEEecCCccCCCC--ceeeecCCCcchHHHHHHHHHHHCCCEEEEeCC
Confidence 44789999999999999988754467 78999999999999999 999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcC
Q 026403 94 RGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLG 173 (239)
Q Consensus 94 ~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~ 173 (239)
+.+..| |. ... .+.+ +|.+|+ ++++.+. ..+
T Consensus 234 ~~~~~~-----~~--~~~--------~~~v-----------------------------~~~~~~---~~~~~~~--~~~ 264 (390)
T TIGR00521 234 PVSLLT-----PP--GVK--------SIKV-----------------------------STAEEM---LEAALNE--LAK 264 (390)
T ss_pred CCccCC-----CC--CcE--------EEEe-----------------------------ccHHHH---HHHHHHh--hcc
Confidence 876432 21 010 1222 222222 2222211 246
Q ss_pred CcceeehhhhccCCcCCcCccCCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccCC
Q 026403 174 PCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRFS 239 (239)
Q Consensus 174 ~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~~ 239 (239)
..|++|+||||+||++ ....++||+|.+++++|+|++|||||+.|++.| |++++|||||||++
T Consensus 265 ~~D~~i~~Aavsd~~~--~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~-~~~~lvgF~aEt~~ 327 (390)
T TIGR00521 265 DFDIFISAAAVADFKP--KTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK-KHQVIVGFKAETND 327 (390)
T ss_pred cCCEEEEccccccccc--cccccccccccCCceeEEEEeCcHHHHHHHhhC-CCcEEEEEEcCCCc
Confidence 7899999999999997 457789999965679999999999999999765 56899999999974
No 7
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=100.00 E-value=7.6e-36 Score=261.85 Aligned_cols=144 Identities=26% Similarity=0.367 Sum_probs=109.7
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCceEE
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQV 123 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v 123 (239)
++||||||||+|||| |||||||+|||++|.+||++|+++||+|++++|+....|.. + ...+ .+.+
T Consensus 1 ~~vliT~G~T~e~iD--~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~---~--~~v~--------~i~v 65 (229)
T PRK06732 1 MKILITSGGTTEPID--SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEP---H--PNLS--------IIEI 65 (229)
T ss_pred CEEEEcCCCcccccC--CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCC---C--CCeE--------EEEE
Confidence 479999999999999 99999999999999999999999999999999876544311 0 0011 1122
Q ss_pred eCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCCcCCcC-----------
Q 026403 124 CQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWK----------- 192 (239)
Q Consensus 124 ~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~----------- 192 (239)
.+ ..+|.. .+. +.++..|++||+||++||.+...
T Consensus 66 ~s--~~~m~~------------------------------~l~---~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~ 110 (229)
T PRK06732 66 EN--VDDLLE------------------------------TLE---PLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDN 110 (229)
T ss_pred ec--HHHHHH------------------------------HHH---HHhcCCCEEEeCCccCCceehhhhhhhhhhhhhh
Confidence 11 222222 221 12457899999999999885211
Q ss_pred -------ccCCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccC
Q 026403 193 -------SMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRF 238 (239)
Q Consensus 193 -------~~~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~ 238 (239)
..+++||+|+.+.++|+|++|||||+.+++ |.|++++|||||||+
T Consensus 111 v~~~~~~~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~ 162 (229)
T PRK06732 111 LNEFLTKQNTEAKISSASDYQVLFLKKTPKVISYVKK-WNPNITLVGFKLLVN 162 (229)
T ss_pred hhhhhccccccCCccCCCCceEEEEEEChHHHHHHHh-hCCCcEEEEEEeccC
Confidence 125899999866799999999999999995 678899999999985
No 8
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=100.00 E-value=1.1e-33 Score=247.79 Aligned_cols=142 Identities=28% Similarity=0.399 Sum_probs=109.1
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCceEEe
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVC 124 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~ 124 (239)
+||||||||+|||| |||||||+|||.+|.+||++|+++||+|++++++.++.|... . .+.+.
T Consensus 1 ~vliT~G~T~e~iD--~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~~~--~--------------~~Dv~ 62 (227)
T TIGR02114 1 KILVTSGGTSEPID--SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKPEPH--P--------------NLSIR 62 (227)
T ss_pred CEEEccCCccCCCC--CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcccccC--C--------------cceee
Confidence 58999999999999 999999999999999999999999999999987644332100 0 11111
Q ss_pred CcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCCcCCcCcc----------
Q 026403 125 QPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM---------- 194 (239)
Q Consensus 125 ~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~---------- 194 (239)
..++..++++.+. +.++..|++||+||++||.+- ...
T Consensus 63 -----------------------------d~~s~~~l~~~v~---~~~g~iDiLVnnAgv~d~~~~-~~~s~e~~~~~~~ 109 (227)
T TIGR02114 63 -----------------------------EIETTKDLLITLK---ELVQEHDILIHSMAVSDYTPV-YMTDLEQVQASDN 109 (227)
T ss_pred -----------------------------cHHHHHHHHHHHH---HHcCCCCEEEECCEeccccch-hhCCHHHHhhhcc
Confidence 1111223333332 346788999999999999852 222
Q ss_pred ---------CCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccC
Q 026403 195 ---------AEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRF 238 (239)
Q Consensus 195 ---------~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~ 238 (239)
.++||+|+.+.++|+|++|||||+.+++ |.|++++|||||||+
T Consensus 110 ~~~~~~~~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~ 161 (227)
T TIGR02114 110 LNEFLSKQNHEAKISSTSEYQVLFLKKTPKVISLVKE-WNPQIHLVGFKLLVN 161 (227)
T ss_pred hhhhhccccccCCcccCCCceeEEEEEChHHHHHHHh-hCCCcEEEEEEeccC
Confidence 4799999866789999999999999995 668889999999964
No 9
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=99.97 E-value=7.8e-32 Score=253.09 Aligned_cols=167 Identities=23% Similarity=0.323 Sum_probs=139.6
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 15 SAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 15 ~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+.++++++++|+..+.+.+..+ ++ .||+||||+|||+|+|| +||||||+|||+||.+||++++++|++|++++|+
T Consensus 158 g~g~~~e~~~Iv~~~~~~~~~~-~l--~gk~Vlit~G~t~E~id--pvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~ 232 (392)
T COG0452 158 GDGRLAEPEEIVEAALALLKTP-DL--KGKKVLITAGPTREYID--PVRFISNRSSGKMGFALAAAAKRRGASVTLVSGP 232 (392)
T ss_pred ccccCCCHHHHHHHHHhhcccc-cc--cCcEEEecCCCCccCCc--cceeeeccccccccHHHHHHHHHcCCceEEecCC
Confidence 4589999999999999998875 67 88999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCC
Q 026403 95 GTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGP 174 (239)
Q Consensus 95 ~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~ 174 (239)
.++.+ |. ..+ .+.+.+ ..+|.+++. +....
T Consensus 233 ~~~~~-----p~--~v~--------~v~v~s--a~em~~av~---------------------------------~~~~~ 262 (392)
T COG0452 233 TSLKI-----PA--GVE--------VVKVES--AEEMLNAVL---------------------------------EAALP 262 (392)
T ss_pred CcCCC-----CC--cce--------eeeeee--HHHHHHHHH---------------------------------hcccc
Confidence 77643 21 111 234443 455555541 23567
Q ss_pred cceeehhhhccCCcCCcCccCCCCcCCCCCCceEEeEeChhHHHHhhhhcCCCcEEEEEecccC
Q 026403 175 CSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKMQRF 238 (239)
Q Consensus 175 ~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PKIl~~i~~~~~p~~~lVgFKlEt~ 238 (239)
+|+++++|||+||++ +..+++||+|..+.+.|+|.+|||||..++..+.+..++|||++||+
T Consensus 263 ~d~~i~~aAvaD~~~--~~~~~~Kikk~~~~~~l~l~~n~dil~~~~~~~~~~~~~Vgfaaet~ 324 (392)
T COG0452 263 ADIFISAAAVADYRP--KWVAEAKIKKQGEPFKLELVPNPDILASVARDYPKKNILVGFAAETG 324 (392)
T ss_pred cCEEEEecccccccc--ccccccceeecCCcceEEeccChhHHHHHHhhccCCCeEEEEeccch
Confidence 999999999999997 67889999997667999999999999999987544348999999986
No 10
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00018 Score=62.40 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| +|..|.++|+.|+++|++|+++.++
T Consensus 8 ~~k~vlVtGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 8 HGKRALITGA------------------STGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 6799999999 6667999999999999999998764
No 11
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00013 Score=63.58 Aligned_cols=35 Identities=40% Similarity=0.452 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||.+|||+| ||..|.++|+.|+++|+.|+++.|.
T Consensus 7 ~~k~~lItGa------------------s~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 7 EGRVAVVTGG------------------SSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 6799999999 5667999999999999999998875
No 12
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00013 Score=66.21 Aligned_cols=35 Identities=29% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| ||..|.++|+.|+++|+.|+++.|+
T Consensus 13 ~gk~~lITGa------------------s~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 13 SGKRAVVTGA------------------SDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 4557999999999999999999875
No 13
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00021 Score=62.09 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 6 ~~k~vlVtGa------------------s~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 6 AGKVALVTGA------------------AQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6667999999999999999998874
No 14
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.79 E-value=0.00023 Score=61.69 Aligned_cols=35 Identities=40% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 9 ~~k~vlItGa------------------~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 9 TGRRALVTGS------------------SQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCCEEEEECC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999999 7888999999999999999988764
No 15
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00021 Score=61.30 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=32.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|+.|+++.|+
T Consensus 4 ~~k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 4 AGRVAIVTGA------------------GSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCcEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEecCC
Confidence 5799999999 7888999999999999999999875
No 16
>PRK06194 hypothetical protein; Provisional
Probab=97.76 E-value=0.00025 Score=62.50 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~k~vlVtGa------------------sggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 5 AGKVAVITGA------------------ASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCEEEEeCC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 6778999999999999999998864
No 17
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00024 Score=61.47 Aligned_cols=35 Identities=29% Similarity=0.353 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 5 ~~k~~lItGa------------------s~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 5 NGKVAIITGA------------------SSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 6678999999999999999999875
No 18
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.75 E-value=0.00028 Score=61.65 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|-.|.++|+.|+++|+.|+++.+.
T Consensus 9 ~~k~~lItGa------------------~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 9 KGKIALITGA------------------SYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 6799999999 5667999999999999999988654
No 19
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00025 Score=62.09 Aligned_cols=35 Identities=29% Similarity=0.290 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 9 ~~~~vlItGa------------------sggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 9 DDQVAVVTGA------------------GRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 7778999999999999999999875
No 20
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.75 E-value=0.00031 Score=61.04 Aligned_cols=44 Identities=27% Similarity=0.213 Sum_probs=35.6
Q ss_pred HHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 31 EFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 31 ~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|+..-.++ .+|+||||+| +|..|.++|+.|++.|+.|+++.+.
T Consensus 5 ~~~~~~~~l--~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 5 KFSMDFFSL--DGKVAIVTGG------------------NTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred hhccccccC--CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 455432335 6799999999 6677999999999999999999875
No 21
>PRK08643 acetoin reductase; Validated
Probab=97.75 E-value=0.00029 Score=60.95 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=30.4
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 2 ~k~~lItGa------------------s~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGA------------------GQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999998 6668999999999999999999865
No 22
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.73 E-value=0.00031 Score=60.99 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 11 ~~k~ilItGa------------------~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 11 SGKTALVTGG------------------SRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999998 6788999999999999999998875
No 23
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00024 Score=61.61 Aligned_cols=35 Identities=29% Similarity=0.337 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 6 ~~~~ilItGa------------------sggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 6 KDKVVIVTGG------------------ASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHcCCcEEEEcCC
Confidence 6799999999 7778999999999999999998865
No 24
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.73 E-value=0.00035 Score=60.10 Aligned_cols=35 Identities=26% Similarity=0.204 Sum_probs=32.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|++|+.+.+.
T Consensus 3 ~~~~vlItG~------------------sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 3 KGKVALVTGA------------------ASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5689999999 7888999999999999999999875
No 25
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00043 Score=59.75 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 7 ~~k~vlItGa------------------s~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 7 TGKIALVTGA------------------SRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 6778999999999999999999864
No 26
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00032 Score=60.01 Aligned_cols=35 Identities=37% Similarity=0.424 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|++|+++.++
T Consensus 4 ~~~~vlItG~------------------~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGA------------------SRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCC
Confidence 5699999999 7778999999999999999988764
No 27
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.72 E-value=0.00032 Score=60.61 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 6 ~~~~vlItGa------------------sg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 6 NGKTAVVTGA------------------ASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeCC
Confidence 5799999999 7889999999999999999988765
No 28
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00033 Score=62.21 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||.+|||+| +|-.|.++|+.|+++|+.|+++.++
T Consensus 5 ~~k~vlVTGa------------------s~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 5 PGRGAVITGG------------------ASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 5667999999999999999988764
No 29
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00033 Score=60.14 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|++|+++|+.|+++.|.
T Consensus 5 ~~k~vlItGa------------------sg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 5 DDKVAIVTGA------------------AGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999999 7788999999999999999999875
No 30
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00042 Score=60.22 Aligned_cols=35 Identities=26% Similarity=0.232 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|-.|.++|+.|+++|++|+++.++
T Consensus 7 ~~k~~lVtG~------------------s~gIG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 7 DGQVAFVTGA------------------GSGIGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 5668999999999999999998875
No 31
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.70 E-value=0.00032 Score=60.29 Aligned_cols=35 Identities=23% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 4 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 4 EGKVALVTGA------------------NTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEcCc
Confidence 6799999999 6668999999999999999998864
No 32
>PRK08589 short chain dehydrogenase; Validated
Probab=97.70 E-value=0.00028 Score=62.28 Aligned_cols=35 Identities=29% Similarity=0.244 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 5 ~~k~vlItGa------------------s~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 5 ENKVAVITGA------------------STGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCc
Confidence 6799999999 5667999999999999999999875
No 33
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.66 E-value=0.00031 Score=61.34 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|+.|++++++
T Consensus 7 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 7 KGKTLVISGG------------------TRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 6799999999 5557999999999999999988754
No 34
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.66 E-value=0.00045 Score=59.80 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|++.|++|+++.++
T Consensus 8 ~~k~~lItGa------------------s~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 8 AGKNILITGS------------------AQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHcCCEEEEEcCC
Confidence 5799999999 6778999999999999999998765
No 35
>PRK06128 oxidoreductase; Provisional
Probab=97.66 E-value=0.00037 Score=62.51 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|++|++.+++
T Consensus 54 ~~k~vlITGa------------------s~gIG~~~a~~l~~~G~~V~i~~~~ 88 (300)
T PRK06128 54 QGRKALITGA------------------DSGIGRATAIAFAREGADIALNYLP 88 (300)
T ss_pred CCCEEEEecC------------------CCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999999 5667999999999999999887753
No 36
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.65 E-value=0.00045 Score=59.03 Aligned_cols=35 Identities=31% Similarity=0.221 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|++|+++|+.|+.+.|+
T Consensus 5 ~~~~ilItGa------------------sg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 5 EGRVALVTGA------------------ARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCEEEEcCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999999 7888999999999999999999876
No 37
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00053 Score=58.66 Aligned_cols=35 Identities=31% Similarity=0.247 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|++|+++.++
T Consensus 6 ~~~~vlItGa------------------~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 6 AGKRALVTGA------------------ARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999999 7888999999999999999998654
No 38
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00055 Score=62.88 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 7 ~~k~vlITGa------------------s~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 7 GRQVVVITGA------------------SAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6699999999 6667999999999999999999874
No 39
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.63 E-value=0.00059 Score=58.44 Aligned_cols=35 Identities=29% Similarity=0.228 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.++++|||+| +|..|.++|+.|+.+|+.|+++.++
T Consensus 6 ~~~~vlVtG~------------------sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 6 QGKNALITGA------------------GRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred CCCEEEEEcC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999998 7888999999999999999999875
No 40
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.63 E-value=0.00052 Score=60.13 Aligned_cols=36 Identities=8% Similarity=0.065 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| |+ +..|.++|+.|+++|+.|++..+.
T Consensus 9 ~~k~~lItGa-----------------s~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 9 AGKRGLVVGI-----------------ANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred CCCEEEEECC-----------------CCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999999 65 368999999999999999998764
No 41
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.62 E-value=0.00042 Score=60.36 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=30.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 7 ~~k~~lItGa------------------s~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 7 NGKVAIITGC------------------NTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCc
Confidence 6799999999 5557999999999999999988653
No 42
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00037 Score=59.93 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=30.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 2 ~k~vlItGa------------------s~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 2 RQKILITGA------------------SSGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 588999999 7778999999999999999999875
No 43
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00054 Score=61.54 Aligned_cols=35 Identities=29% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|++|+++.++
T Consensus 39 ~~k~vlItGa------------------sggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 39 TGKRILLTGA------------------SSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6799999999 6667999999999999999999875
No 44
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.61 E-value=0.00061 Score=58.94 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 10 ~~k~ilItGa------------------s~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 10 AGQVALVTGS------------------ARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHcCCeEEEEeCC
Confidence 6799999999 6778999999999999999999875
No 45
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.61 E-value=0.00055 Score=59.60 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|+.|+++++.
T Consensus 6 ~~k~~lItGa------------------~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 6 EGKVVVITGG------------------STGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6778999999999999999988764
No 46
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00063 Score=59.09 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 5 ~~~~~lItG~------------------s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 5 TGKTALITGA------------------LQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEecCC
Confidence 5699999999 6778999999999999999999875
No 47
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00035 Score=62.67 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 15 ~~k~vlItGa------------------s~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGRVAVVTGA------------------NTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCEEEEcCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6678999999999999999998875
No 48
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.61 E-value=0.00032 Score=62.62 Aligned_cols=36 Identities=36% Similarity=0.496 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++|.|+||+- |||. |.++|+.|.+.||.|++..|..
T Consensus 5 ~~kv~lITGA-----------------SSGi-G~A~A~~l~~~G~~vvl~aRR~ 40 (246)
T COG4221 5 KGKVALITGA-----------------SSGI-GEATARALAEAGAKVVLAARRE 40 (246)
T ss_pred CCcEEEEecC-----------------cchH-HHHHHHHHHHCCCeEEEEeccH
Confidence 5588999987 8886 9999999999999999999863
No 49
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.61 E-value=0.00044 Score=61.26 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||.+|||+| |+ +-.|.++|+.|+++|+.|++.++.
T Consensus 5 ~~k~~lITGa-----------------s~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 5 SGKRILVTGV-----------------ASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CCCEEEEeCC-----------------CCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 5799999999 55 367999999999999999887654
No 50
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.60 E-value=0.0007 Score=57.47 Aligned_cols=35 Identities=34% Similarity=0.372 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++||.|+++.+.
T Consensus 4 ~~~~vlItG~------------------sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 4 EGKVALVTGA------------------SRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999998 7889999999999999999888864
No 51
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.60 E-value=0.00058 Score=58.61 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|.+|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 2 ~~k~~lVtG~------------------s~giG~~~a~~l~~~G~~vv~~~~~ 36 (246)
T PRK12938 2 SQRIAYVTGG------------------MGGIGTSICQRLHKDGFKVVAGCGP 36 (246)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHcCCEEEEEcCC
Confidence 4699999999 7788999999999999999887653
No 52
>PRK06196 oxidoreductase; Provisional
Probab=97.59 E-value=0.00063 Score=61.42 Aligned_cols=35 Identities=34% Similarity=0.395 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||..|.++|+.|+++|+.|+++.|+
T Consensus 25 ~~k~vlITGa------------------sggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 25 SGKTAIVTGG------------------YSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6778999999999999999998875
No 53
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00063 Score=62.62 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||-.|.++|+.|+++|++|+++.++
T Consensus 6 ~~k~vlITGA------------------s~GIG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 6 HGAVVVITGA------------------SSGIGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred CCCEEEEcCC------------------CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5699999999 5667999999999999999998874
No 54
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0008 Score=58.05 Aligned_cols=35 Identities=34% Similarity=0.386 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+.+.++
T Consensus 8 ~~k~ilItGa------------------sg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 8 EGKVALVTGA------------------SSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 7888999999999999999999875
No 55
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.57 E-value=0.00047 Score=59.78 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 7 ~~k~vlVtGa------------------s~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 7 AGKVVVVTGA------------------AQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCc
Confidence 6799999999 6778999999999999999988764
No 56
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.57 E-value=0.00046 Score=60.14 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 5 ~~k~vlVtGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 5 HGQVALITGG------------------GSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 5667999999999999999998865
No 57
>PRK05717 oxidoreductase; Validated
Probab=97.57 E-value=0.00054 Score=59.43 Aligned_cols=35 Identities=29% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 9 ~~k~vlItG~------------------sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 9 NGRVALVTGA------------------ARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CCCEEEEeCC------------------cchHHHHHHHHHHHcCCEEEEEcCC
Confidence 7799999999 7888999999999999999998653
No 58
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00043 Score=62.05 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 8 ~gk~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 8 AGKVVVVTGA------------------ARGIGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6667999999999999999998864
No 59
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00057 Score=58.98 Aligned_cols=35 Identities=34% Similarity=0.399 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|+.|+++.|+
T Consensus 14 ~~k~vlItGa------------------s~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 14 SGKVAVVTGG------------------ASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999998 7788999999999999999998875
No 60
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.00072 Score=57.88 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=32.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|++|+.+.|+.
T Consensus 4 ~~~~vlItGa------------------sg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 4 EGKVAIVTGA------------------SSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CCcEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999988 78899999999999999999998863
No 61
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.55 E-value=0.00066 Score=59.56 Aligned_cols=36 Identities=19% Similarity=0.090 Sum_probs=30.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| | ++..|.++|+.|++.|++|++..++
T Consensus 5 ~~k~~lItGa-----------------s~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 5 TGKKALVTGI-----------------ANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred CCcEEEEeCC-----------------CCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 5799999998 3 3567999999999999999887653
No 62
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00083 Score=58.95 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+.+|+.|+++.+.
T Consensus 8 ~~k~ilItGa------------------sggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 8 AGKNVVVVGG------------------TSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 7778999999999999999999875
No 63
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0009 Score=59.13 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++|++|||+| +|..|.++|+.|+++|++|+++.++.
T Consensus 5 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 5 SGKTLFITGA------------------SRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeccc
Confidence 5699999999 66679999999999999999998763
No 64
>PRK09242 tropinone reductase; Provisional
Probab=97.54 E-value=0.00091 Score=58.00 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 8 ~~k~~lItGa------------------~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 8 DGQTALITGA------------------SKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999998 6778999999999999999999875
No 65
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.54 E-value=0.00077 Score=59.21 Aligned_cols=35 Identities=34% Similarity=0.499 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 9 ~~k~vlVtGa------------------s~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 9 KGKVAVITGG------------------GGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 6678999999999999999998875
No 66
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.54 E-value=0.00065 Score=59.29 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 4 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 4 KGEVVLVTGG------------------ASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CCcEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 6668999999999999999998764
No 67
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00059 Score=59.60 Aligned_cols=36 Identities=36% Similarity=0.427 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++++|+||+| ||..|.++|+.|+++|+.|+.+.++.
T Consensus 3 ~~~~vlVtGa------------------sg~iG~~~a~~l~~~g~~V~~~~r~~ 38 (270)
T PRK06179 3 NSKVALVTGA------------------SSGIGRATAEKLARAGYRVFGTSRNP 38 (270)
T ss_pred CCCEEEEecC------------------CCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3588999999 77889999999999999999998763
No 68
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00083 Score=57.98 Aligned_cols=35 Identities=29% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 6 ~~k~ilItGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 6 SGKVALVTGG------------------AAGIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999999 6778999999999999999999875
No 69
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.00063 Score=59.81 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=30.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
++|.||||+|+ |++..|.++|+.|+++|++|++.++
T Consensus 5 ~~k~~lITGa~----------------~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (261)
T PRK08690 5 QGKKILITGMI----------------SERSIAYGIAKACREQGAELAFTYV 40 (261)
T ss_pred CCcEEEEECCC----------------CCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 67999999981 2456799999999999999998765
No 70
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00079 Score=58.10 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||-.|.++|+.|+++|++|+++.+.
T Consensus 4 ~~k~vlItGa------------------~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 4 KGKVVVVSGV------------------GPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999 6678999999999999999988864
No 71
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0006 Score=60.00 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| +|..|.++|+.|+++|++|+++.++
T Consensus 7 ~~k~~lItGa------------------s~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 7 SGKLAFTTAS------------------SKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred CCCEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 5557999999999999999988764
No 72
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00078 Score=60.16 Aligned_cols=36 Identities=25% Similarity=0.169 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.+..
T Consensus 5 ~~k~~lITGa------------------s~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 5 DGRVVIVTGA------------------GGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 6799999999 44569999999999999999987653
No 73
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.53 E-value=0.00084 Score=54.07 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=55.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCceEE
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQV 123 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v 123 (239)
|.||||+| +|..|.++|+.|+++|+.++++.+.. + .
T Consensus 1 k~~lItGa------------------~~giG~~~a~~l~~~g~~~v~~~~r~---~-----~------------------ 36 (167)
T PF00106_consen 1 KTVLITGA------------------SSGIGRALARALARRGARVVILTSRS---E-----D------------------ 36 (167)
T ss_dssp EEEEEETT------------------TSHHHHHHHHHHHHTTTEEEEEEESS---C-----H------------------
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHhcCceEEEEeeec---c-----c------------------
Confidence 68999999 66689999999999988665555543 0 0
Q ss_pred eCcchHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCCc
Q 026403 124 CQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFY 188 (239)
Q Consensus 124 ~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~ 188 (239)
.+...+....++....+-..+...+...++-..+++.+. +..+..|++|++|.+....
T Consensus 37 ----~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~~~ld~li~~ag~~~~~ 94 (167)
T PF00106_consen 37 ----SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI---KRFGPLDILINNAGIFSDG 94 (167)
T ss_dssp ----HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH---HHHSSESEEEEECSCTTSB
T ss_pred ----ccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence 001111111121111112222333455555555555553 3568899999999997733
No 74
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00095 Score=56.93 Aligned_cols=35 Identities=34% Similarity=0.340 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 5 ~~~~ilItGa------------------sg~iG~~la~~l~~~g~~v~~~~~~ 39 (249)
T PRK12827 5 DSRRVLITGG------------------SGGLGRAIAVRLAADGADVIVLDIH 39 (249)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEcCc
Confidence 5689999999 6778999999999999999998864
No 75
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.53 E-value=0.00076 Score=59.25 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCcc-HHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSG-HRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG-~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| |+| -.|.++|+.|+++||.|++..++
T Consensus 7 ~~k~~lITGa-----------------s~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 7 QGKKGLITGI-----------------ANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred CCcEEEEECC-----------------CCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 6799999999 664 47999999999999999887653
No 76
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.53 E-value=0.00074 Score=59.96 Aligned_cols=36 Identities=8% Similarity=0.073 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| | ++..|.++|+.|+++|+.|++.++.
T Consensus 9 ~~k~~lItGa-----------------s~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 9 AGKRGLILGV-----------------ANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred cCCEEEEECC-----------------CCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 6799999999 4 3667999999999999999887653
No 77
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.52 E-value=0.00043 Score=63.07 Aligned_cols=36 Identities=33% Similarity=0.463 Sum_probs=32.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||+|+||+- |||. |.++|.+++++|+.++++.|..
T Consensus 11 ~~kvVvITGA-----------------SsGI-G~~lA~~la~~G~~l~lvar~~ 46 (282)
T KOG1205|consen 11 AGKVVLITGA-----------------SSGI-GEALAYELAKRGAKLVLVARRA 46 (282)
T ss_pred CCCEEEEeCC-----------------CcHH-HHHHHHHHHhCCCceEEeehhh
Confidence 7799999987 8996 9999999999999999999863
No 78
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.52 E-value=0.0008 Score=58.00 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=30.3
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 3 k~vlItG~------------------sg~iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 3 PVALVTGG------------------RRGIGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecC
Confidence 78999999 7888999999999999999998865
No 79
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00099 Score=57.86 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 7 ~~k~vlItGa------------------~~gIG~~~a~~l~~~G~~vv~i~~~ 41 (257)
T PRK12744 7 KGKVVLIAGG------------------AKNLGGLIARDLAAQGAKAVAIHYN 41 (257)
T ss_pred CCcEEEEECC------------------CchHHHHHHHHHHHCCCcEEEEecC
Confidence 5799999999 6668999999999999998888754
No 80
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.51 E-value=0.00088 Score=57.47 Aligned_cols=34 Identities=24% Similarity=0.138 Sum_probs=30.9
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||+| +|..|.++|+.|+++|++|+.+.+.
T Consensus 1 ~~~vlItGa------------------~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGA------------------ASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 378999988 7889999999999999999999875
No 81
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00071 Score=58.86 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=30.3
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|+||||+| ||..|.++|+.|+++|++|+++.++
T Consensus 2 ~~~vlItGa------------------s~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 2 PLKVFITGA------------------SSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCEEEEEcC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378999999 6778999999999999999998865
No 82
>PRK12743 oxidoreductase; Provisional
Probab=97.50 E-value=0.00092 Score=58.14 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=29.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|+||||+| ||-.|.++|+.|+++|+.|+++.+.
T Consensus 2 ~k~vlItGa------------------s~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 2 AQVAIVTAS------------------DSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999999 5668999999999999999888653
No 83
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.50 E-value=0.0011 Score=56.10 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||..|..+|+.|+++|+.|+++.|+
T Consensus 4 ~~~~ilItGa------------------sg~iG~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 4 QGKTALVTGA------------------SRGIGRAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999 7889999999999999999999876
No 84
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00095 Score=58.39 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 5 AGKVAIVTGG------------------ATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999 6678999999999999999999875
No 85
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.49 E-value=0.00071 Score=61.16 Aligned_cols=37 Identities=35% Similarity=0.559 Sum_probs=32.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.++.+|||+. |+| .|.++|+.|+++|++|+++.|...
T Consensus 5 ~~~~~lITGA-----------------SsG-IG~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 5 KGKTALITGA-----------------SSG-IGAELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CCcEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCcHH
Confidence 6799999998 666 599999999999999999999744
No 86
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.49 E-value=0.00075 Score=58.94 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| |+ +..|.++|+.|+++|+.|++.+++
T Consensus 6 ~~k~~lItGa-----------------s~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 6 SGKKIVVMGV-----------------ANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred CCCEEEEeCC-----------------CCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 6799999999 53 567999999999999999988764
No 87
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.49 E-value=0.0011 Score=56.78 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 2 ~~~~ilItGa------------------s~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 2 KDKTAIVTGG------------------GGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEecCC
Confidence 4699999999 7888999999999999999998765
No 88
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00099 Score=57.07 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|++|+++|+.|+++.++
T Consensus 5 ~~k~vlItGa------------------sg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 5 QGKTALITGG------------------TSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCC
Confidence 5689999999 7888999999999999999988764
No 89
>PRK06398 aldose dehydrogenase; Validated
Probab=97.47 E-value=0.00075 Score=59.05 Aligned_cols=35 Identities=34% Similarity=0.343 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 5 ~gk~vlItGa------------------s~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 5 KDKVAIVTGG------------------SQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 6799999999 6667999999999999999998865
No 90
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.001 Score=57.63 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=30.4
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
||.+|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 1 ~k~~lItG~------------------s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGG------------------SSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999999 6668999999999999999988865
No 91
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.46 E-value=0.0013 Score=56.42 Aligned_cols=33 Identities=33% Similarity=0.410 Sum_probs=29.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.
T Consensus 3 ~~~~vlItGa------------------~g~iG~~~a~~l~~~g~~v~~~~ 35 (250)
T PRK08063 3 SGKVALVTGS------------------SRGIGKAIALRLAEEGYDIAVNY 35 (250)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEc
Confidence 4689999999 78889999999999999998754
No 92
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0016 Score=56.44 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||.+|||+| |+| .|.++|+.|+++|++|+++.|.
T Consensus 4 ~~k~~lVtGa-----------------s~G-IG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 4 KSSIILITSA-----------------GSV-LGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred CCeEEEEECC-----------------ccH-HHHHHHHHHHHCCCEEEEEcCC
Confidence 6799999999 454 6999999999999999998764
No 93
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.46 E-value=0.0011 Score=57.13 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|++|+++|+.|+++.+.
T Consensus 11 ~~k~vlItG~------------------~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 11 KDRIILVTGA------------------GDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCcEEEEeCC
Confidence 6799999999 7889999999999999999998875
No 94
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.001 Score=59.99 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| +|-.|.++|++|+++|+.|+++.+.
T Consensus 11 ~~k~~lVTGa------------------s~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGA------------------AAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEecCC
Confidence 6799999999 5667999999999999999988653
No 95
>PRK09186 flagellin modification protein A; Provisional
Probab=97.45 E-value=0.00077 Score=58.09 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 3 ~~k~vlItGa------------------s~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 3 KGKTILITGA------------------GGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEecC
Confidence 5799999999 7778999999999999999998764
No 96
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0014 Score=56.26 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++||||+| +|..|.++|++|+.+|++|+++.++
T Consensus 5 ~~~~vlitGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 5 KDKVVVVTGS------------------GRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCcEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999 7778999999999999999887654
No 97
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.45 E-value=0.001 Score=57.84 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=30.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.||.+|||+| +|..|.++|+.|++.|+.|+.+.+
T Consensus 9 ~~k~~lItG~------------------~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 9 EGKVAVVTGC------------------DTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEecC
Confidence 6799999999 667899999999999999987753
No 98
>PLN02253 xanthoxin dehydrogenase
Probab=97.45 E-value=0.00089 Score=58.90 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||++|||+| +|..|.++|++|+++|++|+++.+.
T Consensus 17 ~~k~~lItGa------------------s~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 17 LGKVALVTGG------------------ATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999999 6778999999999999999998764
No 99
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0016 Score=56.72 Aligned_cols=102 Identities=22% Similarity=0.182 Sum_probs=58.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCc
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESA 120 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~ 120 (239)
.||+||||+| |. |-.|.++|+.|+++|+.|++.++... .+.....+.
T Consensus 5 ~~k~vlVtGa-----------------s~~~giG~~~a~~l~~~G~~vi~~~~~~~-~~~~~~~~~-------------- 52 (256)
T PRK12859 5 KNKVAVVTGV-----------------SRLDGIGAAICKELAEAGADIFFTYWTAY-DKEMPWGVD-------------- 52 (256)
T ss_pred CCcEEEEECC-----------------CCCCChHHHHHHHHHHCCCeEEEEecccc-ccccccccc--------------
Confidence 6799999999 32 46799999999999999988764311 010000000
Q ss_pred eEEeCcchHHHHHHHHHHHHhhhcccc--cccccccHHHHHHHHHHHHHHhhhcCCcceeehhhhccCC
Q 026403 121 VQVCQPYSEAVKRAIRDHHAAVAGGLL--LKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDF 187 (239)
Q Consensus 121 v~v~~~~~~~~~~av~~~~~~~~~~~l--l~~~f~t~~dy~~~l~~i~~~l~~~~~~d~~i~aAAVsDf 187 (239)
..+..+...+.++ .+.++ +...+...++...+++.+. +.++..|++|++|++...
T Consensus 53 -------~~~~~~~~~~~~~--~g~~~~~~~~D~~~~~~i~~~~~~~~---~~~g~id~li~~ag~~~~ 109 (256)
T PRK12859 53 -------QDEQIQLQEELLK--NGVKVSSMELDLTQNDAPKELLNKVT---EQLGYPHILVNNAAYSTN 109 (256)
T ss_pred -------HHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHH---HHcCCCcEEEECCCCCCC
Confidence 0111111111111 12233 3344555666666666553 346788999999997644
No 100
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.44 E-value=0.00084 Score=61.41 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|+.||||+| ||..|.++|+.|+++|++|+++.|+
T Consensus 52 ~g~~~lITGA------------------s~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGSWALVTGP------------------TDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCCEEEEeCC------------------CcHHHHHHHHHHHHCCCCEEEEECC
Confidence 5799999999 5557999999999999999999875
No 101
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0015 Score=56.30 Aligned_cols=34 Identities=32% Similarity=0.283 Sum_probs=30.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.+|+|+||+| ||..|.++|++|+++|+.|+++.+
T Consensus 5 ~~~~ilItGa------------------sg~iG~~la~~l~~~G~~v~i~~~ 38 (254)
T PRK12746 5 DGKVALVTGA------------------SRGIGRAIAMRLANDGALVAIHYG 38 (254)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcC
Confidence 5689999999 788899999999999999987643
No 102
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0017 Score=56.91 Aligned_cols=35 Identities=29% Similarity=0.363 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 6 ~~k~vlItGa------------------sg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDRTYLVTGG------------------GSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6799999998 6778999999999999999999875
No 103
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.41 E-value=0.0011 Score=57.42 Aligned_cols=34 Identities=29% Similarity=0.298 Sum_probs=30.8
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|.||||+| +|..|.++|++|+++|++|+++.++
T Consensus 2 ~k~ilItG~------------------~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGG------------------GQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 488999999 7788999999999999999999864
No 104
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0015 Score=59.25 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||.+|||+| |+| .|.++|+.|++.|+.|+++++..
T Consensus 7 ~~k~~lITGg-----------------s~G-IG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGA-----------------TRG-AGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeccc
Confidence 6799999999 455 79999999999999999998763
No 105
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.41 E-value=0.0011 Score=59.96 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+++.|+
T Consensus 5 ~~k~vlVTGa------------------s~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 5 AKGTVIITGA------------------SSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCCEEEEEcC------------------CChHHHHHHHHHHHCCCEEEEEECC
Confidence 5699999999 6678999999999999999998864
No 106
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0016 Score=55.48 Aligned_cols=35 Identities=37% Similarity=0.347 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEE-ecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL-YRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i-~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|+.|+++ .++
T Consensus 4 ~~~~ilI~Ga------------------sg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 4 MGKVAIVTGA------------------SGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 5689999999 7889999999999999999988 543
No 107
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0015 Score=56.03 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|..+|+.|+++|+.|+++.++
T Consensus 5 ~~k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITGA------------------SSGIGKATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999998 7889999999999999999999875
No 108
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0017 Score=56.85 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 4 ~~~~ilVtGa------------------sggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 4 RGKVVAITGG------------------ARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEECC
Confidence 5689999999 7778999999999999999988764
No 109
>PRK06182 short chain dehydrogenase; Validated
Probab=97.40 E-value=0.0015 Score=57.40 Aligned_cols=35 Identities=37% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|+.|+.+.+.
T Consensus 2 ~~k~vlItGa------------------sggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGA------------------SSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999 6778999999999999999998875
No 110
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.39 E-value=0.0011 Score=58.16 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||.+|||+| | |+-.|.++|+.|+++|++|+++.+.
T Consensus 6 ~~k~~lItGa-----------------~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGV-----------------ANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECC-----------------CCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 6799999999 4 3667999999999999999998764
No 111
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00094 Score=57.83 Aligned_cols=36 Identities=33% Similarity=0.421 Sum_probs=32.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.++.
T Consensus 5 ~~k~~lItGa------------------s~gIG~~la~~l~~~g~~v~~~~r~~ 40 (252)
T PRK07856 5 TGRVVLVTGG------------------TRGIGAGIARAFLAAGATVVVCGRRA 40 (252)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCh
Confidence 6799999999 67789999999999999999998753
No 112
>PRK07985 oxidoreductase; Provisional
Probab=97.39 E-value=0.0013 Score=59.15 Aligned_cols=35 Identities=29% Similarity=0.292 Sum_probs=30.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|++|+++.++
T Consensus 48 ~~k~vlITGa------------------s~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGG------------------DSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEecCC
Confidence 6799999999 6678999999999999999887643
No 113
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.38 E-value=0.0018 Score=54.90 Aligned_cols=36 Identities=33% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
..|+||||+| ||..|.++|+.|+++|+.|+++.+..
T Consensus 5 ~~~~vlItGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 5 MGRVALVTGA------------------ARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4589999998 88899999999999999998877653
No 114
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.37 E-value=0.0017 Score=56.56 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=28.9
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| +|..|.++|+.|+++||.|+++.+.
T Consensus 1 m~vlItGa------------------s~gIG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 1 MNVLVTAS------------------SRGIGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred CeEEEEcC------------------CcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46899999 5668999999999999999998764
No 115
>PRK06720 hypothetical protein; Provisional
Probab=97.37 E-value=0.0026 Score=53.37 Aligned_cols=35 Identities=31% Similarity=0.242 Sum_probs=30.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| +|-.|.++|..|+++|+.|+++.+.
T Consensus 15 ~gk~~lVTGa------------------~~GIG~aia~~l~~~G~~V~l~~r~ 49 (169)
T PRK06720 15 AGKVAIVTGG------------------GIGIGRNTALLLAKQGAKVIVTDID 49 (169)
T ss_pred CCCEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEECC
Confidence 6799999999 4567999999999999999888754
No 116
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.36 E-value=0.0017 Score=55.81 Aligned_cols=35 Identities=34% Similarity=0.398 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~~~~lItG~------------------s~~iG~~la~~l~~~g~~v~~~~~~ 39 (247)
T PRK12935 5 NGKVAIVTGG------------------AKGIGKAITVALAQEGAKVVINYNS 39 (247)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5699999999 6778999999999999999876653
No 117
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0018 Score=56.43 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++++|||+| ||..|.++|+.|+++|+.|+.+.++
T Consensus 4 ~~~~vlItG~------------------s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 4 KDKRVLLTGA------------------SGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEECC
Confidence 5689999998 7778999999999999999999875
No 118
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0017 Score=55.22 Aligned_cols=35 Identities=37% Similarity=0.451 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++||||+| +|..|.++|++|+++|+.|+.+.|+
T Consensus 5 ~~~~ilItGa------------------tg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 5 KGKVALITGG------------------SKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 4689999999 8889999999999999999999874
No 119
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0011 Score=58.20 Aligned_cols=35 Identities=37% Similarity=0.455 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|.+|||+| ||..|.++|+.|+++||.|+.+.++
T Consensus 2 ~~k~~lItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 2 NKKIAIVTGA------------------SSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHhCCCEEEEEeCC
Confidence 4589999999 7888999999999999999998865
No 120
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.0016 Score=59.67 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|++||||+| ++| +|.++|.+|++||+.+.+..-+.
T Consensus 37 ~g~~vLITGg-----------------g~G-lGr~ialefa~rg~~~vl~Din~ 72 (300)
T KOG1201|consen 37 SGEIVLITGG-----------------GSG-LGRLIALEFAKRGAKLVLWDINK 72 (300)
T ss_pred cCCEEEEeCC-----------------Cch-HHHHHHHHHHHhCCeEEEEeccc
Confidence 7899999999 566 69999999999999887877553
No 121
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.34 E-value=0.0022 Score=54.85 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=31.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|+++|||+| +|..|.++|+.|+++|+.|+.+.+.
T Consensus 4 ~~~~~lItG~------------------~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 4 KDKVIVITGG------------------AQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999998 6778999999999999999888764
No 122
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0023 Score=54.15 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| ||..|.++|+.|+++|+.|+++.|+
T Consensus 6 ~~k~vlItGa------------------tg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 6 QGKVVAITGG------------------FGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCEEEEECC------------------CCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 5699999999 7888999999999999999999985
No 123
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0018 Score=55.86 Aligned_cols=35 Identities=23% Similarity=0.138 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|..+|+.|+++|+.|+.+.++
T Consensus 10 ~~~~vlItGa------------------~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 10 DGLRVLVTGG------------------ASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred CCCEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 6699999999 7888999999999999999988875
No 124
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.33 E-value=0.0023 Score=55.50 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 10 ~~k~vlVtG~------------------s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 10 DGKCAIITGA------------------GAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5799999999 6667999999999999999988764
No 125
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0022 Score=55.70 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.5
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++||||+| +|..|.++|+.|+++|+.|+.+.+.
T Consensus 1 ~~~vlVtGa------------------sg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGA------------------SEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378999998 7778999999999999999999864
No 126
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.31 E-value=0.002 Score=57.43 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| | ++-.|.++|+.|++.|+.|++..++
T Consensus 4 ~~k~~lItGa-----------------s~~~GIG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 4 KGKKGLIVGV-----------------ANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred CCcEEEEECC-----------------CCCCCHHHHHHHHHHHCCCEEEEEecC
Confidence 5799999999 4 2457999999999999999988764
No 127
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0021 Score=55.17 Aligned_cols=35 Identities=31% Similarity=0.375 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|++|+.+.|+
T Consensus 5 ~~k~vlItGa------------------sggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 5 PGKTALVTGS------------------SRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCcEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999999 6778999999999999999988765
No 128
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0021 Score=55.65 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCe-EEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~~~ 94 (239)
++|+|+||+| +|..|..+|+.|+++|++ |+++.+.
T Consensus 5 ~~k~vlItGa------------------~g~iG~~la~~l~~~G~~~V~~~~r~ 40 (260)
T PRK06198 5 DGKVALVTGG------------------TQGLGAAIARAFAERGAAGLVICGRN 40 (260)
T ss_pred CCcEEEEeCC------------------CchHHHHHHHHHHHCCCCeEEEEcCC
Confidence 6799999988 677899999999999999 8888764
No 129
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0022 Score=57.43 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 45 ~~k~iLItGa------------------sggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 45 KGKVALITGG------------------DSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999 6778999999999999999988875
No 130
>PRK06484 short chain dehydrogenase; Validated
Probab=97.29 E-value=0.0017 Score=62.36 Aligned_cols=74 Identities=19% Similarity=0.145 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHHhcC-CCCCCCCceEEEecCCccc---------cc-C----CCCeeeeecCCccHHHHHHHHHHH
Q 026403 18 PLNDRAAISQKLKEFIALN-SSESGTRRVACVTSGGTTV---------PL-E----QRCVRYIDNFSSGHRGAASTEHLI 82 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~-~~~~~~~k~vlITsGgT~e---------pI-D----~~~VR~ItN~SSG~~G~~iAe~~~ 82 (239)
++.+++++...+.-.+... ... .|..+.+-+|.+.. +- + .+.+=.||=-|+| .|.++|+.|+
T Consensus 214 ~~~~~~~va~~v~~l~~~~~~~~--~G~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~k~~lItGas~g-IG~~~a~~l~ 290 (520)
T PRK06484 214 RLGRPEEIAEAVFFLASDQASYI--TGSTLVVDGGWTVYGGSGPASTAQAPSPLAESPRVVAITGGARG-IGRAVADRFA 290 (520)
T ss_pred CCcCHHHHHHHHHHHhCccccCc--cCceEEecCCeeccccccCCCCccCCCCcccCCCEEEEECCCcH-HHHHHHHHHH
Confidence 4567888887776444321 112 34444444433211 00 0 0122244444554 6999999999
Q ss_pred HCCCeEEEEecC
Q 026403 83 KMGYAVIFLYRR 94 (239)
Q Consensus 83 ~~Ga~V~~i~~~ 94 (239)
++|+.|+++.++
T Consensus 291 ~~G~~V~~~~r~ 302 (520)
T PRK06484 291 AAGDRLLIIDRD 302 (520)
T ss_pred HCCCEEEEEeCC
Confidence 999999999864
No 131
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0015 Score=57.48 Aligned_cols=35 Identities=29% Similarity=0.234 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|.||||+| ||..|..+|+.|+++|+.|+++.++
T Consensus 2 ~~k~vlItGa------------------sg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGA------------------SRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEECC
Confidence 3589999998 7888999999999999999999875
No 132
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.28 E-value=0.002 Score=57.13 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=30.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|||+| |+ +-.|.++|+.|+++||.|++..+.
T Consensus 6 ~~k~~lVTGa-----------------s~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 6 QGKRGLIMGV-----------------ANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred CCCEEEEeCC-----------------CCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 6799999999 44 246999999999999999988753
No 133
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0025 Score=55.32 Aligned_cols=35 Identities=31% Similarity=0.399 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|-.|.++|+.|+++|+.|+++.+.
T Consensus 8 ~~k~vlItGa------------------s~giG~~la~~l~~~g~~v~~~~~~ 42 (258)
T PRK09134 8 APRAALVTGA------------------ARRIGRAIALDLAAHGFDVAVHYNR 42 (258)
T ss_pred CCCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999988 6778999999999999999887654
No 134
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.26 E-value=0.0027 Score=54.04 Aligned_cols=33 Identities=39% Similarity=0.453 Sum_probs=29.7
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|.+|||+| +|..|.++|+.|+++|+.|+.+.++
T Consensus 1 k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGG------------------MGGIGTAICQRLAKDGYRVAANCGP 33 (242)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999 7778999999999999999998873
No 135
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.26 E-value=0.0022 Score=55.54 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||-.|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~~~vlItGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 5 QGKVALLTGA------------------ASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEcCC
Confidence 5689999999 6778999999999999999999865
No 136
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.25 E-value=0.0029 Score=54.42 Aligned_cols=33 Identities=36% Similarity=0.407 Sum_probs=29.4
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|++|||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 1 k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~ 33 (254)
T TIGR02415 1 KVALVTGG------------------AQGIGKGIAERLAKDGFAVAVADLN 33 (254)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899988 7778999999999999999999865
No 137
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.24 E-value=0.0024 Score=56.21 Aligned_cols=35 Identities=11% Similarity=0.067 Sum_probs=30.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.+|+||||+| | ++..|.++|+.|++.|++|+++.+
T Consensus 5 ~~k~vlItGa-----------------s~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (260)
T PRK06997 5 AGKRILITGL-----------------LSNRSIAYGIAKACKREGAELAFTYV 40 (260)
T ss_pred CCcEEEEeCC-----------------CCCCcHHHHHHHHHHHCCCeEEEEcc
Confidence 5799999998 3 566899999999999999998764
No 138
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0031 Score=54.46 Aligned_cols=34 Identities=32% Similarity=0.315 Sum_probs=29.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.+|++|||+| +|..|.++|+.|++.|+.|++..+
T Consensus 3 ~~k~~lItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 3 KGKVALVTGA------------------SRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCeEEEEcC
Confidence 4699999999 555799999999999999988754
No 139
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0028 Score=54.96 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 6 ~~k~~lItGa------------------s~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 6 KGKVALITGG------------------TRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999 5667999999999999999987654
No 140
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0027 Score=55.66 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=29.3
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 1 ~~vlVtGa------------------sggIG~~la~~l~~~g~~V~~~~r~ 33 (270)
T PRK05650 1 NRVMITGA------------------ASGLGRAIALRWAREGWRLALADVN 33 (270)
T ss_pred CEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899998 7778999999999999999988764
No 141
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0022 Score=63.33 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 370 ~~k~vlItGa------------------s~giG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 370 VGKVVLITGA------------------SSGIGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5799999999 6778999999999999999999875
No 142
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0024 Score=56.29 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|++|+.+.++
T Consensus 3 ~~~~vlVtGa------------------sggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGV------------------SSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecC------------------CChHHHHHHHHHHhCcCEEEEEeCC
Confidence 3588999999 7788999999999999999999875
No 143
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0027 Score=54.42 Aligned_cols=33 Identities=36% Similarity=0.434 Sum_probs=29.0
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+|.+|||+| +|..|.++|++|+++|+.|+++.+
T Consensus 2 ~~~~lVtG~------------------~~~iG~~~a~~l~~~G~~vv~~~~ 34 (248)
T PRK06123 2 RKVMIITGA------------------SRGIGAATALLAAERGYAVCLNYL 34 (248)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEecC
Confidence 478999999 778899999999999999987764
No 144
>PRK05855 short chain dehydrogenase; Validated
Probab=97.22 E-value=0.0049 Score=59.16 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHhcCC------------------CCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHH
Q 026403 20 NDRAAISQKLKEFIALNS------------------SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHL 81 (239)
Q Consensus 20 ~~~~~i~~~v~~~~~~~~------------------~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~ 81 (239)
.+|+++...+.+|+.... .. .++++|||+| ||..|.++|+.|
T Consensus 276 e~p~~~~~~i~~fl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lv~G~------------------s~giG~~~a~~l 335 (582)
T PRK05855 276 SHPQVLAAAVAEFVDAVEGGPPARALLRARVGRPRGPF--SGKLVVVTGA------------------GSGIGRETALAF 335 (582)
T ss_pred hChhHHHHHHHHHHHhccCCCchHHHHHhhhccccccC--CCCEEEEECC------------------cCHHHHHHHHHH
Confidence 357777777777776321 11 4577888888 666899999999
Q ss_pred HHCCCeEEEEecC
Q 026403 82 IKMGYAVIFLYRR 94 (239)
Q Consensus 82 ~~~Ga~V~~i~~~ 94 (239)
+++|++|+++.++
T Consensus 336 ~~~G~~v~~~~r~ 348 (582)
T PRK05855 336 AREGAEVVASDID 348 (582)
T ss_pred HHCCCEEEEEeCC
Confidence 9999999999875
No 145
>PRK09135 pteridine reductase; Provisional
Probab=97.22 E-value=0.0016 Score=55.54 Aligned_cols=35 Identities=37% Similarity=0.557 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++||||+| +|..|..+|+.|+++|+.|+.+.+.
T Consensus 5 ~~~~vlItGa------------------~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGG------------------ARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 5689999999 7889999999999999999999865
No 146
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.22 E-value=0.0019 Score=56.20 Aligned_cols=36 Identities=28% Similarity=0.323 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|++|+++.+..
T Consensus 8 ~~k~vlItG~------------------s~gIG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 8 QGKIIIVTGG------------------SSGIGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 5699999999 67789999999999999999988654
No 147
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0022 Score=55.87 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=29.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCcc-HHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSG-HRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG-~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +| ..|.++|+.|+++|+.|+++.+.
T Consensus 16 ~~k~vlItG~------------------sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 16 AGKVVLVTAA------------------AGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred CCCEEEEECC------------------CcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999998 44 47999999999999999887653
No 148
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0016 Score=55.46 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|++|+++.++.
T Consensus 4 ~~k~~lVtGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~~ 39 (235)
T PRK06550 4 MTKTVLITGA------------------ASGIGLAQARAFLAQGAQVYGVDKQD 39 (235)
T ss_pred CCCEEEEcCC------------------CchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 6799999999 67789999999999999999988753
No 149
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0018 Score=56.05 Aligned_cols=36 Identities=31% Similarity=0.368 Sum_probs=32.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+||+||||+| ||..|.++|+.|+++|++|+++.+..
T Consensus 8 ~~k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 8 AGKRALVTGG------------------TKGIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred CCCEEEEECC------------------CCchhHHHHHHHHHCCCEEEEEeCCh
Confidence 6799999999 67789999999999999999998763
No 150
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0037 Score=54.90 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=29.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|++|||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 1 k~vlItGa------------------s~giG~~la~~la~~G~~vv~~~r~ 33 (272)
T PRK07832 1 KRCFVTGA------------------ASGIGRATALRLAAQGAELFLTDRD 33 (272)
T ss_pred CEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 6778999999999999999988764
No 151
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0034 Score=53.78 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++|+.|+++|+.|+++.|.
T Consensus 5 ~~k~vlItG~------------------sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGA------------------SQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999998 7778999999999999999998875
No 152
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.19 E-value=0.0023 Score=55.04 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|++|||+| +|..|.++|+.|+++|++|+.+.+..
T Consensus 7 ~~k~vlItGa------------------s~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGA------------------AQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecch
Confidence 6699999999 67789999999999999999998754
No 153
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.18 E-value=0.0037 Score=53.22 Aligned_cols=35 Identities=31% Similarity=0.227 Sum_probs=30.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|++|||+| +|..|.++|+.|+++|+.|++..++
T Consensus 5 ~~~~vlItGa------------------~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 5 SGRKALVTGA------------------SGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5699999999 7888999999999999988776543
No 154
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.18 E-value=0.0031 Score=54.14 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=29.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| +|..|..+|+.|+++|+.|++++++
T Consensus 3 k~ilItGa------------------s~giG~~la~~l~~~g~~v~~~~~~ 35 (248)
T PRK06947 3 KVVLITGA------------------SRGIGRATAVLAAARGWSVGINYAR 35 (248)
T ss_pred cEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999999 6778999999999999999887654
No 155
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.18 E-value=0.0025 Score=57.76 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=29.6
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC-CeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G-a~V~~i~~~ 94 (239)
+|++|||+| ||-.|.++|+.|+++| +.|+++.+.
T Consensus 3 ~k~vlITGa------------------s~GIG~aia~~L~~~G~~~V~l~~r~ 37 (314)
T TIGR01289 3 KPTVIITGA------------------SSGLGLYAAKALAATGEWHVIMACRD 37 (314)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHcCCCEEEEEeCC
Confidence 589999999 4556999999999999 999998764
No 156
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0026 Score=54.07 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=32.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.+|+||||+| ||..|.++|++|+++|+.|+.+.++..
T Consensus 2 ~~k~vlItG~------------------s~~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 2 SSRTVLVTGA------------------TKGIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3589999999 788899999999999999999988643
No 157
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0045 Score=53.67 Aligned_cols=35 Identities=29% Similarity=0.317 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| ||..|.++|++|+++|+.|+++.+.
T Consensus 6 ~~~~vlItGa------------------sggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 6 AGRVAVITGG------------------GSGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 6799999999 6778999999999999999998764
No 158
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0025 Score=55.90 Aligned_cols=33 Identities=30% Similarity=0.303 Sum_probs=30.4
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| +|..|.++|++|+++|+.|+.+.++
T Consensus 3 k~vlVtGa------------------sg~IG~~la~~L~~~g~~v~~~~r~ 35 (276)
T PRK06482 3 KTWFITGA------------------SSGFGRGMTERLLARGDRVAATVRR 35 (276)
T ss_pred CEEEEecC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999999 7889999999999999999998875
No 159
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0027 Score=55.07 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=30.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|++|||+| ||..|.++|+.++++|+.|+++.++
T Consensus 2 k~vlItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGA------------------ASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 68999999 7788999999999999999999865
No 160
>PRK06484 short chain dehydrogenase; Validated
Probab=97.14 E-value=0.0029 Score=60.83 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||.+|||+| ++..|.++|+.|+++|+.|+++.++
T Consensus 4 ~~k~~lITGa------------------s~gIG~aia~~l~~~G~~V~~~~r~ 38 (520)
T PRK06484 4 QSRVVLVTGA------------------AGGIGRAACQRFARAGDQVVVADRN 38 (520)
T ss_pred CCeEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 4457999999999999999999875
No 161
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.0037 Score=54.21 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=31.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCc-cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| |+ |..|.++|+.|+++|+.|+++.+.
T Consensus 4 ~~k~vlItGa-----------------s~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGA-----------------SRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCC-----------------CCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 5699999999 33 568999999999999999998764
No 162
>PRK08264 short chain dehydrogenase; Validated
Probab=97.12 E-value=0.002 Score=54.93 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=32.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC-eEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~~~~s 96 (239)
.+|+||||+| ||..|.++|+.|+++|+ .|+.+.++..
T Consensus 5 ~~~~vlItGg------------------sg~iG~~la~~l~~~G~~~V~~~~r~~~ 42 (238)
T PRK08264 5 KGKVVLVTGA------------------NRGIGRAFVEQLLARGAAKVYAAARDPE 42 (238)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCcccEEEEecChh
Confidence 5689999999 88899999999999999 9998887643
No 163
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0039 Score=54.61 Aligned_cols=36 Identities=11% Similarity=-0.065 Sum_probs=30.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCC-ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| + |+..|.++|+.|+++|+.|++..+.
T Consensus 6 ~~k~~lItGa-----------------~~s~GIG~a~a~~la~~G~~v~l~~r~ 42 (256)
T PRK07889 6 EGKRILVTGV-----------------ITDSSIAFHVARVAQEQGAEVVLTGFG 42 (256)
T ss_pred cCCEEEEeCC-----------------CCcchHHHHHHHHHHHCCCEEEEecCc
Confidence 6799999998 3 4567999999999999999987754
No 164
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0054 Score=54.07 Aligned_cols=35 Identities=37% Similarity=0.429 Sum_probs=31.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|.+|||+| +|-.|.++|+.|+++|+.|+++.++
T Consensus 9 ~~~~vlVtGa------------------~g~iG~~la~~L~~~G~~V~~~~r~ 43 (274)
T PRK07775 9 DRRPALVAGA------------------SSGIGAATAIELAAAGFPVALGARR 43 (274)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999 7778999999999999999888764
No 165
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.08 E-value=0.0031 Score=54.52 Aligned_cols=33 Identities=30% Similarity=0.332 Sum_probs=29.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 1 ~~vlItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGA------------------TAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEECC
Confidence 46889987 7788999999999999999998875
No 166
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.03 E-value=0.0049 Score=52.70 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=30.5
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||+| +|..|.++|+.|+++|++|+++.++
T Consensus 2 ~k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 2 PAPILITGA------------------GQRIGLALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred CceEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999 6678999999999999999998875
No 167
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0031 Score=54.50 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=30.3
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||+| ||..|.++|+.|+++|++|+.+.++
T Consensus 2 ~k~ilItGa------------------t~~iG~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 2 KRTALVTGA------------------AGGIGQALARRFLAAGDRVLALDID 35 (257)
T ss_pred CCEEEEECC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999 6678999999999999999998864
No 168
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.00 E-value=0.0057 Score=52.13 Aligned_cols=32 Identities=38% Similarity=0.482 Sum_probs=28.3
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
|.||||+| +|..|.++++.|+++|++|+++.+
T Consensus 2 ~~~lItGa------------------~g~iG~~l~~~l~~~g~~v~~~~~ 33 (247)
T PRK09730 2 AIALVTGG------------------SRGIGRATALLLAQEGYTVAVNYQ 33 (247)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999 788899999999999999987653
No 169
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0063 Score=53.41 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=29.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| ||..|.++|+.|+++|+.|+.+.+.
T Consensus 2 k~vlItGa------------------sggiG~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 2 PVVLITGC------------------SSGIGRALADAFKAAGYEVWATARK 34 (274)
T ss_pred CEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999999 6778999999999999999998865
No 170
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0071 Score=52.94 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC-CeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G-a~V~~i~~~~ 95 (239)
++|+||||+| ||..|.++|++|+++| +.|+++.|..
T Consensus 7 ~~~~vlItGa------------------s~giG~~la~~l~~~gg~~V~~~~r~~ 43 (253)
T PRK07904 7 NPQTILLLGG------------------TSEIGLAICERYLKNAPARVVLAALPD 43 (253)
T ss_pred CCcEEEEEcC------------------CcHHHHHHHHHHHhcCCCeEEEEeCCc
Confidence 6799999999 6778999999999995 9999988753
No 171
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0076 Score=53.23 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=31.0
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|+||||+| ||..|.++|+.|+++|+.|+.+.++
T Consensus 4 ~k~vlItGa------------------sggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 4 KRSILITGC------------------SSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999999 7778999999999999999999875
No 172
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.93 E-value=0.0091 Score=53.81 Aligned_cols=37 Identities=41% Similarity=0.420 Sum_probs=33.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.||++|||+| |+|. |.++|+.|++.|+.|+...+...
T Consensus 7 ~gkvalVTG~-----------------s~GI-G~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 7 AGKVALVTGG-----------------SSGI-GKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred CCcEEEEECC-----------------CChH-HHHHHHHHHHCCCEEEEEeCCHH
Confidence 7799999999 7885 99999999999999999998644
No 173
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.92 E-value=0.0063 Score=52.16 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|-.|.++|+.|++.|++|+++.++
T Consensus 4 ~~k~ilItGa------------------s~gIG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 4 SEQTVLVTGG------------------SRGLGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCCEEEEeCC------------------CCcHHHHHHHHHHHCCCeEEEEcCC
Confidence 5689999999 6778999999999999999887653
No 174
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.92 E-value=0.0055 Score=61.85 Aligned_cols=35 Identities=34% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 413 ~gkvvLVTGa------------------sggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 413 ARRVAFVTGG------------------AGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred CCCEEEEeCC------------------CcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6799999999 6778999999999999999998864
No 175
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.92 E-value=0.0075 Score=57.19 Aligned_cols=25 Identities=32% Similarity=0.250 Sum_probs=22.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|..|.++|+.|.++|++|+++.++
T Consensus 219 sggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 219 ARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5667999999999999999998763
No 176
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.90 E-value=0.0079 Score=51.21 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=30.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|++|||+| +|..|.++|+.|+++|+.|+.+.++
T Consensus 3 k~vlItG~------------------s~~iG~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 3 KIALVTGA------------------KRGIGSAIARELLNDGYRVIATYFS 35 (245)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 68999999 7778999999999999999999876
No 177
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.009 Score=51.88 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|-.|.++|+.|+++|+.|+++.++
T Consensus 6 ~~k~vlItG~------------------~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 6 AGKRVLITGA------------------SKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999999 5668999999999999999999875
No 178
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.85 E-value=0.01 Score=46.95 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=26.6
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCe-EEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~~~ 94 (239)
|+++||+| +|..|.++|+.|+++|+. |+++.++
T Consensus 1 ~~~li~Ga------------------~~~iG~~~~~~l~~~g~~~v~~~~r~ 34 (180)
T smart00822 1 GTYLITGG------------------LGGLGLELARWLAERGARHLVLLSRS 34 (180)
T ss_pred CEEEEEcC------------------CChHHHHHHHHHHHhhCCeEEEEeCC
Confidence 57888887 778999999999999985 6665543
No 179
>PRK07069 short chain dehydrogenase; Validated
Probab=96.83 E-value=0.0064 Score=52.07 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=28.3
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||||+| +|..|.++|+.|+++|++|+++.++
T Consensus 1 ~ilVtG~------------------~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGA------------------AGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred CEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3789988 6778999999999999999999875
No 180
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.83 E-value=0.004 Score=57.84 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=32.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+++|+||++ ||-.|.+|++.|++|||.|.-.-|..
T Consensus 5 ~~~~VcVTGA------------------sGfIgswivk~LL~rGY~V~gtVR~~ 40 (327)
T KOG1502|consen 5 EGKKVCVTGA------------------SGFIGSWIVKLLLSRGYTVRGTVRDP 40 (327)
T ss_pred CCcEEEEeCC------------------chHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 4699999999 99999999999999999998888763
No 181
>PLN02778 3,5-epimerase/4-reductase
Probab=96.73 E-value=0.0047 Score=55.82 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=29.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (239)
..++||||+| +|..|..++++|+++|++|++.
T Consensus 8 ~~~kiLVtG~------------------tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYGK------------------TGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEECC------------------CCHHHHHHHHHHHhCCCEEEEe
Confidence 5589999999 9999999999999999999864
No 182
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.73 E-value=0.0062 Score=56.35 Aligned_cols=37 Identities=35% Similarity=0.367 Sum_probs=33.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
+++|+||+| |+|. |.++|.++.+.|++|+.+.|+...
T Consensus 33 ~~hi~itgg-----------------S~gl-gl~la~e~~~~ga~Vti~ar~~~k 69 (331)
T KOG1210|consen 33 RRHILITGG-----------------SSGL-GLALALECKREGADVTITARSGKK 69 (331)
T ss_pred cceEEEecC-----------------cchh-hHHHHHHHHHccCceEEEeccHHH
Confidence 389999999 8885 999999999999999999998663
No 183
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0086 Score=50.97 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=30.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+||||+| +|..|.++|+.|+++|+.|+++.++.
T Consensus 2 k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGA------------------SRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 67999999 78889999999999999999998763
No 184
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.71 E-value=0.015 Score=53.82 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+.++||+| .+| .|.++|++++.+|+.|++.+|+.
T Consensus 34 ~~~~~vVTGa-----------------nsG-IG~eta~~La~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 34 SGKVALVTGA-----------------TSG-IGFETARELALRGAHVVLACRNE 69 (314)
T ss_pred CCcEEEEECC-----------------CCc-hHHHHHHHHHhCCCEEEEEeCCH
Confidence 6789999988 566 59999999999999999999874
No 185
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.68 E-value=0.0097 Score=52.09 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=28.4
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+.+|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 2 ~~~lITGa------------------s~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGA------------------AKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCC------------------CCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 57899999 4557999999999999999988754
No 186
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.013 Score=50.34 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=30.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|+||||+| ||..|.++|+.|+++|+.|+.+.+.
T Consensus 2 ~~~vlVtGa------------------sg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGA------------------GSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999 7889999999999999999988864
No 187
>PRK08324 short chain dehydrogenase; Validated
Probab=96.62 E-value=0.015 Score=58.56 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+||||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 421 ~gk~vLVTGa------------------sggIG~~la~~L~~~Ga~Vvl~~r~ 455 (681)
T PRK08324 421 AGKVALVTGA------------------AGGIGKATAKRLAAEGACVVLADLD 455 (681)
T ss_pred CCCEEEEecC------------------CCHHHHHHHHHHHHCcCEEEEEeCC
Confidence 6799999999 7788999999999999999999875
No 188
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.62 E-value=0.027 Score=53.72 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=41.2
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHH--HHHHHHHCCCeE
Q 026403 11 SFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMGYAV 88 (239)
Q Consensus 11 ~f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~--iAe~~~~~Ga~V 88 (239)
.|...+..|..=++-+..-.+++..+.+..+.+|++|||+| |+| .|.+ ||++| ..||+|
T Consensus 9 g~i~~~~hp~gc~~~v~~qi~~~~~~~~~~~ggK~aLVTGa-----------------SsG-IGlA~~IA~al-~~GA~V 69 (398)
T PRK13656 9 GFICTTAHPVGCEANVKEQIEYVKAQGPIANGPKKVLVIGA-----------------SSG-YGLASRIAAAF-GAGADT 69 (398)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHhcCCcCCCCCEEEEECC-----------------Cch-HhHHHHHHHHH-HcCCeE
Confidence 34444444444333333333444433333236799999999 555 5988 89999 999999
Q ss_pred EEEec
Q 026403 89 IFLYR 93 (239)
Q Consensus 89 ~~i~~ 93 (239)
+.++.
T Consensus 70 i~v~~ 74 (398)
T PRK13656 70 LGVFF 74 (398)
T ss_pred EEEec
Confidence 98874
No 189
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.61 E-value=0.0098 Score=55.36 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=35.2
Q ss_pred CCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 38 ~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+.+.+|+||||+| ||..|.+++++|.++|++|+.+.+..
T Consensus 16 ~~~~~~~~IlVtGg------------------tGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 16 YWPSEKLRICITGA------------------GGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCCCCEEEEECC------------------ccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 34447799999999 99999999999999999999998753
No 190
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.016 Score=57.35 Aligned_cols=37 Identities=27% Similarity=0.459 Sum_probs=32.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+||.||||+| +|..|.++++.+++.+.+.+.+.+.+.
T Consensus 249 ~gK~vLVTGa------------------gGSiGsel~~qil~~~p~~i~l~~~~E 285 (588)
T COG1086 249 TGKTVLVTGG------------------GGSIGSELCRQILKFNPKEIILFSRDE 285 (588)
T ss_pred CCCEEEEeCC------------------CCcHHHHHHHHHHhcCCCEEEEecCch
Confidence 7899999999 899999999999999998877776543
No 191
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.58 E-value=0.011 Score=54.03 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=32.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++||||+| +|..|..+|++|+++|+.|+.+.+.
T Consensus 9 ~~~~vLVtG~------------------~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 9 ATGTYCVTGA------------------TGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999999 8999999999999999999988764
No 192
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.018 Score=50.96 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=26.3
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||++ +| .|.++|+.|. +|+.|+++.+.
T Consensus 2 ~k~~lItGa------------------~g-IG~~la~~l~-~G~~Vv~~~r~ 33 (275)
T PRK06940 2 KEVVVVIGA------------------GG-IGQAIARRVG-AGKKVLLADYN 33 (275)
T ss_pred CCEEEEECC------------------Ch-HHHHHHHHHh-CCCEEEEEeCC
Confidence 478888855 44 7999999996 89999998864
No 193
>PRK05599 hypothetical protein; Provisional
Probab=96.55 E-value=0.022 Score=49.51 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=26.6
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|.+|||+| |+| .|.++|+.|. .|+.|+++.|.
T Consensus 1 ~~vlItGa-----------------s~G-IG~aia~~l~-~g~~Vil~~r~ 32 (246)
T PRK05599 1 MSILILGG-----------------TSD-IAGEIATLLC-HGEDVVLAARR 32 (246)
T ss_pred CeEEEEeC-----------------ccH-HHHHHHHHHh-CCCEEEEEeCC
Confidence 46899998 444 6999999998 59999998764
No 194
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.027 Score=48.04 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|++|||+| +|..|..+|+.|+++|++|+++.+.
T Consensus 8 ~~~~~lItGa------------------~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 8 SGKSVLVTGA------------------SSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred CCCEEEEeCC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6699999999 7778999999999999999998875
No 195
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=96.51 E-value=0.016 Score=49.91 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=56.2
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhccccc
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLL 148 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll 148 (239)
+|+..|.++|+.|++.||+|++.+++.... ...+.+..++ ...+++
T Consensus 4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~-----------------------------~~~~~~l~~~-----~~~~~~ 49 (241)
T PF13561_consen 4 SSSGIGRAIARALAEEGANVILTDRNEEKL-----------------------------ADALEELAKE-----YGAEVI 49 (241)
T ss_dssp STSHHHHHHHHHHHHTTEEEEEEESSHHHH-----------------------------HHHHHHHHHH-----TTSEEE
T ss_pred CCCChHHHHHHHHHHCCCEEEEEeCChHHH-----------------------------HHHHHHHHHH-----cCCceE
Confidence 356679999999999999999999753200 1122222222 224456
Q ss_pred ccccccHHHHHHHHHHHHHHhhhc-CCcceeehhhhccCC
Q 026403 149 KLPFTTIFEYLQMLQMIAVSSRSL-GPCSMFYLAAAVSDF 187 (239)
Q Consensus 149 ~~~f~t~~dy~~~l~~i~~~l~~~-~~~d~~i~aAAVsDf 187 (239)
...+...++...+.+.+. +.+ +..|++|++|+.+..
T Consensus 50 ~~D~~~~~~v~~~~~~~~---~~~~g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 50 QCDLSDEESVEALFDEAV---ERFGGRIDILVNNAGISPP 86 (241)
T ss_dssp ESCTTSHHHHHHHHHHHH---HHHCSSESEEEEEEESCTG
T ss_pred eecCcchHHHHHHHHHHH---hhcCCCeEEEEeccccccc
Confidence 667777777777777664 456 899999999998765
No 196
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.43 E-value=0.009 Score=55.09 Aligned_cols=122 Identities=20% Similarity=0.224 Sum_probs=80.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCce
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v 121 (239)
.|+-++||++ |...|.+.|++|++||.+|.+|.|..+..
T Consensus 48 ~g~WAVVTGa------------------TDGIGKayA~eLAkrG~nvvLIsRt~~KL----------------------- 86 (312)
T KOG1014|consen 48 LGSWAVVTGA------------------TDGIGKAYARELAKRGFNVVLISRTQEKL----------------------- 86 (312)
T ss_pred cCCEEEEECC------------------CCcchHHHHHHHHHcCCEEEEEeCCHHHH-----------------------
Confidence 5677888877 77789999999999999999999864311
Q ss_pred EEeCcchHHHHHHHHHHHHhhhcccccccccccHHH-HHHHHHHHHHHhhhcCCcceeehhhhccCCcCCcCccCCCCcC
Q 026403 122 QVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFE-YLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQ 200 (239)
Q Consensus 122 ~v~~~~~~~~~~av~~~~~~~~~~~ll~~~f~t~~d-y~~~l~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~ 200 (239)
+.+.+.+.+- +..+-+...+.|+...+ |...++.+. ..+..++|.++..+=.+| +...+....
T Consensus 87 -------~~v~kEI~~~--~~vev~~i~~Dft~~~~~ye~i~~~l~-----~~~VgILVNNvG~~~~~P--~~f~~~~~~ 150 (312)
T KOG1014|consen 87 -------EAVAKEIEEK--YKVEVRIIAIDFTKGDEVYEKLLEKLA-----GLDVGILVNNVGMSYDYP--ESFLKYPEG 150 (312)
T ss_pred -------HHHHHHHHHH--hCcEEEEEEEecCCCchhHHHHHHHhc-----CCceEEEEecccccCCCc--HHHHhCchh
Confidence 1222222221 12446777788887765 777776552 346779999999987663 433222221
Q ss_pred CCCCCceEEeEeChhHHHHh
Q 026403 201 SGSGPLDMQLLQVPKMLSVL 220 (239)
Q Consensus 201 s~~~~l~l~L~~~PKIl~~i 220 (239)
+-.+-+++++..+.++-+.+
T Consensus 151 ~~~~ii~vN~~~~~~~t~~i 170 (312)
T KOG1014|consen 151 ELQNIINVNILSVTLLTQLI 170 (312)
T ss_pred hhhheeEEecchHHHHHHHh
Confidence 22345778888877765554
No 197
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.37 E-value=0.0068 Score=54.15 Aligned_cols=37 Identities=32% Similarity=0.455 Sum_probs=33.5
Q ss_pred CCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 41 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 41 ~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|++|+||||+| ||..|..+|+.|+.+|++|+.+.+..
T Consensus 2 ~~~~~ilVtGa------------------tGfIG~~l~~~L~~~g~~V~~~~r~~ 38 (322)
T PLN02662 2 GEGKVVCVTGA------------------SGYIASWLVKLLLQRGYTVKATVRDP 38 (322)
T ss_pred CCCCEEEEECC------------------hHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 36799999999 99999999999999999999888754
No 198
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.35 E-value=0.028 Score=47.49 Aligned_cols=26 Identities=38% Similarity=0.394 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+|..|..+|+.|+++|++|+.+.++.
T Consensus 7 ~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 7 SRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 77789999999999999999998753
No 199
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.29 E-value=0.028 Score=47.91 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|-.|.++|+.|+++|++|+++.+.
T Consensus 7 s~giG~~~a~~l~~~G~~v~~~~~~ 31 (239)
T TIGR01831 7 SRGIGRAIANRLAADGFEICVHYHS 31 (239)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5567999999999999999988864
No 200
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.19 E-value=0.012 Score=58.94 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~~ 95 (239)
++++||||+| ||..|..++++|+++ |++|+.+.+..
T Consensus 314 ~~~~VLVTGa------------------tGFIGs~Lv~~Ll~~~g~~V~~l~r~~ 350 (660)
T PRK08125 314 RRTRVLILGV------------------NGFIGNHLTERLLRDDNYEVYGLDIGS 350 (660)
T ss_pred cCCEEEEECC------------------CchHHHHHHHHHHhCCCcEEEEEeCCc
Confidence 6799999999 999999999999985 79999998754
No 201
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.15 E-value=0.0097 Score=54.60 Aligned_cols=44 Identities=20% Similarity=0.105 Sum_probs=37.0
Q ss_pred HHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 31 EFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 31 ~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++..+..+ ++|+||||+| ||..|..++++|+++|++|+.+.+.
T Consensus 5 ~~~~~~~~~--~~~~vlVtGa------------------tGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 5 EELRTKLVL--APKRWLITGV------------------AGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred hhhhhcccc--cCCEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344444456 6799999999 9999999999999999999988764
No 202
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.13 E-value=0.024 Score=50.35 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=31.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
++||||+| +|..|..+|+.|+++|+.|+.+.++..
T Consensus 1 ~~vlItG~------------------~G~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (328)
T TIGR03466 1 MKVLVTGA------------------TGFVGSAVVRLLLEQGEEVRVLVRPTS 35 (328)
T ss_pred CeEEEECC------------------ccchhHHHHHHHHHCCCEEEEEEecCc
Confidence 46899998 999999999999999999999998643
No 203
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.07 E-value=0.016 Score=52.05 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=28.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| +|..|.++++.|+.+| +|+.+.+.
T Consensus 1 m~iLVtG~------------------~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 1 MNILLFGK------------------TGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred CeEEEECC------------------CCHHHHHHHHHhhccC-CEEEeccc
Confidence 47999999 9999999999999999 78877654
No 204
>PLN02583 cinnamoyl-CoA reductase
Probab=95.91 E-value=0.014 Score=52.27 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| ||..|.++++.|+++||+|+.+.|+
T Consensus 5 ~~k~vlVTGa------------------tG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 5 SSKSVCVMDA------------------SGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 5689999999 8999999999999999999998874
No 205
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.88 E-value=0.015 Score=53.10 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+||+||||+| +|..|.++|+.|+++|++|+.+.+..
T Consensus 3 ~~k~ilItGa------------------tG~IG~~l~~~L~~~G~~V~~~~r~~ 38 (349)
T TIGR02622 3 QGKKVLVTGH------------------TGFKGSWLSLWLLELGAEVYGYSLDP 38 (349)
T ss_pred CCCEEEEECC------------------CChhHHHHHHHHHHCCCEEEEEeCCC
Confidence 5699999999 99999999999999999999988654
No 206
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.016 Score=50.89 Aligned_cols=36 Identities=28% Similarity=0.224 Sum_probs=32.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||++|||+| ||..|.++|+.|+++|++|+++.+..
T Consensus 13 ~~k~~lITGa------------------s~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 13 QGKRIGITGA------------------SGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCCEEEEEcC------------------CcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 6799999999 66679999999999999999988753
No 207
>PLN00015 protochlorophyllide reductase
Probab=95.82 E-value=0.041 Score=49.57 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=21.5
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMG-YAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~~~ 94 (239)
|+.+|.++|+.|+++| +.|+++.+.
T Consensus 6 s~GIG~aia~~l~~~G~~~V~~~~r~ 31 (308)
T PLN00015 6 SSGLGLATAKALAETGKWHVVMACRD 31 (308)
T ss_pred CChHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4557999999999999 999888764
No 208
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.82 E-value=0.018 Score=51.73 Aligned_cols=37 Identities=30% Similarity=0.340 Sum_probs=33.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.||+||||+| ||..|.++++.|+++|++|+.+.|+.+
T Consensus 4 ~~~~vlVTGa------------------tG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (322)
T PLN02986 4 GGKLVCVTGA------------------SGYIASWIVKLLLLRGYTVKATVRDLT 40 (322)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 5799999999 999999999999999999998887643
No 209
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.80 E-value=0.015 Score=53.19 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=29.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (239)
+||++|||+| |.|+|. |.++|+.|+++|+.|++
T Consensus 8 ~gk~alITGa---------------~~s~GI-G~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGV---------------ADDNGY-GWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCC---------------CCCCcH-HHHHHHHHHHCCCEEEE
Confidence 7899999999 225775 99999999999999998
No 210
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=95.80 E-value=0.023 Score=51.18 Aligned_cols=25 Identities=36% Similarity=0.543 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHHHHCC--CeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMG--YAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G--a~V~~i~~~ 94 (239)
||..|..|++.|+++| ++|..+.+.
T Consensus 6 sGflG~~iv~~Ll~~g~~~~Vr~~d~~ 32 (280)
T PF01073_consen 6 SGFLGSHIVRQLLERGYIYEVRVLDRS 32 (280)
T ss_pred CcHHHHHHHHHHHHCCCceEEEEcccc
Confidence 9999999999999999 788877754
No 211
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.79 E-value=0.051 Score=48.37 Aligned_cols=38 Identities=29% Similarity=0.295 Sum_probs=34.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..|+||||++ |+|..|.++|.+|.+.||.|.--+|..+
T Consensus 6 ~~k~VlItgc-----------------s~GGIG~ala~ef~~~G~~V~AtaR~~e 43 (289)
T KOG1209|consen 6 QPKKVLITGC-----------------SSGGIGYALAKEFARNGYLVYATARRLE 43 (289)
T ss_pred CCCeEEEeec-----------------CCcchhHHHHHHHHhCCeEEEEEccccc
Confidence 4589999999 9999999999999999999998887644
No 212
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.79 E-value=0.015 Score=52.70 Aligned_cols=36 Identities=39% Similarity=0.552 Sum_probs=33.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++|+||||+| +|..|.++++.|+.+|++|+.+.+..
T Consensus 5 ~~~~vlVTGa------------------tGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGI------------------TGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEEeccc
Confidence 6799999999 99999999999999999999998754
No 213
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.74 E-value=0.033 Score=46.62 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=26.5
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC-eEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~~~ 94 (239)
.+|||+| +|..|..+|++++.+|+ .|+++.|+
T Consensus 2 tylitGG------------------~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGG------------------LGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETT------------------TSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECC------------------ccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 5789998 89999999999999987 57777765
No 214
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.65 E-value=0.024 Score=48.24 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=32.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|+||||+| +|..|.++|+.|+++|+.|+.+.|+.
T Consensus 4 ~~~~vlItGa------------------~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 4 KGKKVAIIGV------------------SEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CCcEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5699999999 78899999999999999999998753
No 215
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.063 Score=44.73 Aligned_cols=32 Identities=31% Similarity=0.188 Sum_probs=28.0
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++|||+| +|..|.++|+.|.++ ++|+++.++
T Consensus 1 ~~vlItGa------------------s~giG~~la~~l~~~-~~vi~~~r~ 32 (199)
T PRK07578 1 MKILVIGA------------------SGTIGRAVVAELSKR-HEVITAGRS 32 (199)
T ss_pred CeEEEEcC------------------CcHHHHHHHHHHHhc-CcEEEEecC
Confidence 36899998 677899999999999 999998875
No 216
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.02 Score=49.15 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=30.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+||||+| +|..|.++|++|+++|++|+++.+..
T Consensus 2 k~vlItGa------------------sggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGT------------------SQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecC------------------CchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 68999988 77889999999999999999998754
No 217
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=95.60 E-value=0.029 Score=50.46 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=29.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| ||..|.+++++|.++|++|+.+.++
T Consensus 1 MriLI~Ga------------------sG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 1 MRILITGA------------------SGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEEETT------------------TSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred CEEEEECC------------------CCHHHHHHHHHHhhCCCEEEEeCch
Confidence 47999998 9999999999999999999998654
No 218
>PRK12742 oxidoreductase; Provisional
Probab=95.56 E-value=0.026 Score=47.96 Aligned_cols=35 Identities=31% Similarity=0.357 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 5 ~~k~vlItGa------------------sggIG~~~a~~l~~~G~~v~~~~~~ 39 (237)
T PRK12742 5 TGKKVLVLGG------------------SRGIGAAIVRRFVTDGANVRFTYAG 39 (237)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEecCC
Confidence 5799999998 7778999999999999999887653
No 219
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.48 E-value=0.026 Score=50.78 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||+||||+| +|..|.++++.|+++|++|+.+.+..
T Consensus 4 ~~k~vlVtG~------------------~G~IG~~l~~~L~~~G~~V~~~~r~~ 39 (325)
T PLN02989 4 GGKVVCVTGA------------------SGYIASWIVKLLLFRGYTINATVRDP 39 (325)
T ss_pred CCCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 5699999999 89999999999999999998877653
No 220
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.39 E-value=0.03 Score=50.80 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=32.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+++||||+| +|..|..+|++|+++|++|+.+.+..
T Consensus 8 ~~~~vlItG~------------------~GfIG~~l~~~L~~~g~~V~~~~r~~ 43 (338)
T PLN00198 8 GKKTACVIGG------------------TGFLASLLIKLLLQKGYAVNTTVRDP 43 (338)
T ss_pred CCCeEEEECC------------------chHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5799999999 89999999999999999998887654
No 221
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.029 Score=48.23 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++|||+| ||..|.++|+.|+++|++|+++.|+
T Consensus 2 ~~vlItGa------------------s~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 2 TAVLITGA------------------TSGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHhCCCEEEEEECC
Confidence 67999999 7778999999999999999999875
No 222
>PLN02686 cinnamoyl-CoA reductase
Probab=95.31 E-value=0.03 Score=52.06 Aligned_cols=35 Identities=31% Similarity=0.568 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+| +|..|.++++.|+++||+|+.+.++
T Consensus 52 ~~k~VLVTGa------------------tGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 52 EARLVCVTGG------------------VSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6799999999 8999999999999999999987765
No 223
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.032 Score=47.88 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=30.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+|+||+| ||..|.++|+.|+++|+.|+++.+..
T Consensus 2 ~~vlItGa------------------s~giG~~~a~~l~~~G~~Vi~~~r~~ 35 (243)
T PRK07102 2 KKILIIGA------------------TSDIARACARRYAAAGARLYLAARDV 35 (243)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 68999999 77889999999999999999998753
No 224
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.25 E-value=0.03 Score=50.97 Aligned_cols=34 Identities=35% Similarity=0.538 Sum_probs=31.4
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+||||+| +|..|.++++.|+++|++|+.+.+..
T Consensus 1 ~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGI------------------TGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcC------------------CCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 68999998 99999999999999999999998764
No 225
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.20 E-value=0.1 Score=45.27 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=27.3
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH----CCCeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK----MGYAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~----~Ga~V~~i~~~ 94 (239)
.||||+| +|..|.++|+.|++ .|+.|+++.++
T Consensus 2 ~vlItGa------------------s~GIG~~~a~~la~~~~~~g~~V~~~~r~ 37 (256)
T TIGR01500 2 VCLVTGA------------------SRGFGRTIAQELAKCLKSPGSVLVLSARN 37 (256)
T ss_pred EEEEecC------------------CCchHHHHHHHHHHhhccCCcEEEEEEcC
Confidence 5788888 45579999999997 79999999875
No 226
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.11 Score=43.88 Aligned_cols=25 Identities=24% Similarity=0.169 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
||..|.++|+.|+++|++|+++.++
T Consensus 6 s~~iG~~~a~~l~~~G~~v~~~~r~ 30 (230)
T PRK07041 6 SSGIGLALARAFAAEGARVTIASRS 30 (230)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6778999999999999999999875
No 227
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.15 E-value=0.04 Score=47.30 Aligned_cols=37 Identities=38% Similarity=0.454 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.+|+||||+| |+| .|.++|+.|+.+|+.|+++.+...
T Consensus 4 ~~~~ilITGa-----------------s~G-iG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 4 SGKVALVTGA-----------------SSG-IGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCEEEEeCC-----------------CCH-HHHHHHHHHHHCCCeEEEEcCCCc
Confidence 6799999999 555 699999999999999999997643
No 228
>PLN02650 dihydroflavonol-4-reductase
Probab=95.09 E-value=0.038 Score=50.45 Aligned_cols=36 Identities=31% Similarity=0.453 Sum_probs=32.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|+||||+| +|..|..+++.|+.+|++|+.+.+..
T Consensus 4 ~~k~iLVTGa------------------tGfIGs~l~~~L~~~G~~V~~~~r~~ 39 (351)
T PLN02650 4 QKETVCVTGA------------------SGFIGSWLVMRLLERGYTVRATVRDP 39 (351)
T ss_pred CCCEEEEeCC------------------cHHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 3589999999 99999999999999999999887653
No 229
>PLN02572 UDP-sulfoquinovose synthase
Probab=95.06 E-value=0.034 Score=53.28 Aligned_cols=34 Identities=32% Similarity=0.464 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
++|+||||+| +|..|..|+++|+++|++|+.+.+
T Consensus 46 ~~k~VLVTGa------------------tGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 46 KKKKVMVIGG------------------DGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred cCCEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEec
Confidence 7799999999 999999999999999999999753
No 230
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.01 E-value=0.076 Score=46.72 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=28.1
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC--CeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~~~ 94 (239)
+||||+| ||..|.++++.|+++| ++|+.+.+.
T Consensus 1 ~ilItGa------------------tG~iG~~l~~~l~~~~~~~~v~~~~~~ 34 (317)
T TIGR01181 1 RILVTGG------------------AGFIGSNFVRYILNEHPDAEVIVLDKL 34 (317)
T ss_pred CEEEEcC------------------CchHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4899998 9999999999999988 789888753
No 231
>PLN02214 cinnamoyl-CoA reductase
Probab=95.01 E-value=0.044 Score=50.30 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=33.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++|+||||+| +|..|.++++.|+++|++|+.+.+..
T Consensus 9 ~~~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~~ 44 (342)
T PLN02214 9 AGKTVCVTGA------------------GGYIASWIVKILLERGYTVKGTVRNP 44 (342)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCcCEEEEEeCCc
Confidence 5689999999 99999999999999999999998753
No 232
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.00 E-value=0.042 Score=45.04 Aligned_cols=27 Identities=30% Similarity=0.437 Sum_probs=25.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||..|..++++|+++|++|+.+.|+.+
T Consensus 7 tG~vG~~l~~~L~~~~~~V~~~~R~~~ 33 (183)
T PF13460_consen 7 TGFVGRALAKQLLRRGHEVTALVRSPS 33 (183)
T ss_dssp TSHHHHHHHHHHHHTTSEEEEEESSGG
T ss_pred CChHHHHHHHHHHHCCCEEEEEecCch
Confidence 999999999999999999999999855
No 233
>PLN02240 UDP-glucose 4-epimerase
Probab=94.81 E-value=0.055 Score=49.01 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+||||+| +|..|.++++.|+++|++|+.+.+.
T Consensus 4 ~~~~vlItGa------------------tG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 4 MGRTILVTGG------------------AGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999999 8999999999999999999999753
No 234
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=94.77 E-value=0.091 Score=46.52 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=21.7
Q ss_pred ccHHHHHHHHHHHHCCC-eEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGY-AVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga-~V~~i~~~ 94 (239)
||..|..+|+.|.++|+ .|+.+.+.
T Consensus 7 tG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 7 AGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred cchhhHHHHHHHHHcCCceEEEEecC
Confidence 99999999999999998 68776544
No 235
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.75 E-value=0.051 Score=49.09 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=31.7
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
++||||+| ||..|..++++|+++|++|+.+.|+.+
T Consensus 1 MkIlVtGa------------------tG~iG~~lv~~Ll~~g~~V~~l~R~~~ 35 (317)
T CHL00194 1 MSLLVIGA------------------TGTLGRQIVRQALDEGYQVRCLVRNLR 35 (317)
T ss_pred CEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEEcChH
Confidence 47999998 999999999999999999999998743
No 236
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.75 E-value=0.12 Score=46.24 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=30.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||++|+|+| .+| .|.+.+++|+.+|..|..|.-.
T Consensus 4 tGKna~vtgg-----------------agG-IGl~~sk~Ll~kgik~~~i~~~ 38 (261)
T KOG4169|consen 4 TGKNALVTGG-----------------AGG-IGLATSKALLEKGIKVLVIDDS 38 (261)
T ss_pred cCceEEEecC-----------------Cch-hhHHHHHHHHHcCchheeehhh
Confidence 6899999999 355 5999999999999998887743
No 237
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.74 E-value=0.053 Score=51.07 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=34.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.+++||||+| ||..|..++++|+++|++|+.+.|+.+
T Consensus 59 ~~~kVLVtGa------------------tG~IG~~l~~~Ll~~G~~V~~l~R~~~ 95 (390)
T PLN02657 59 KDVTVLVVGA------------------TGYIGKFVVRELVRRGYNVVAVAREKS 95 (390)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEEechh
Confidence 6789999999 999999999999999999999998753
No 238
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=94.70 E-value=0.052 Score=54.14 Aligned_cols=36 Identities=25% Similarity=0.433 Sum_probs=32.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||+||||+| +|..|.++++.|+++|+.|+.+.|..
T Consensus 79 ~gKvVLVTGA------------------TGgIG~aLAr~LLk~G~~Vval~Rn~ 114 (576)
T PLN03209 79 DEDLAFVAGA------------------TGKVGSRTVRELLKLGFRVRAGVRSA 114 (576)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6789999999 89999999999999999999998764
No 239
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.66 E-value=0.062 Score=46.77 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=32.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+++||||+| ||..|..+++.|+.+|+.|+.+.|..
T Consensus 16 ~~~~ilItGa------------------sG~iG~~l~~~L~~~g~~V~~~~R~~ 51 (251)
T PLN00141 16 KTKTVFVAGA------------------TGRTGKRIVEQLLAKGFAVKAGVRDV 51 (251)
T ss_pred cCCeEEEECC------------------CcHHHHHHHHHHHhCCCEEEEEecCH
Confidence 5689999999 99999999999999999999888753
No 240
>PRK08017 oxidoreductase; Provisional
Probab=94.63 E-value=0.061 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=30.6
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+||||+| ||..|.++|+.|+++|+.|+.+.++.
T Consensus 3 k~vlVtGa------------------sg~IG~~la~~l~~~g~~v~~~~r~~ 36 (256)
T PRK08017 3 KSVLITGC------------------SSGIGLEAALELKRRGYRVLAACRKP 36 (256)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 67999999 78899999999999999999988753
No 241
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.63 E-value=0.058 Score=51.54 Aligned_cols=36 Identities=28% Similarity=0.331 Sum_probs=32.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+||+|+||+| ||..|.++|+.+.++|+.|+.+.+..
T Consensus 177 ~gK~VLITGA------------------SgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 177 KGKTVAVTGA------------------SGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred CCCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999 77889999999999999999998753
No 242
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.057 Score=46.26 Aligned_cols=34 Identities=38% Similarity=0.323 Sum_probs=30.2
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+++|||+| ||..|.++|+.|+++|++|+++.++.
T Consensus 2 ~~vlItGa------------------sggiG~~ia~~l~~~G~~v~~~~r~~ 35 (243)
T PRK07023 2 VRAIVTGH------------------SRGLGAALAEQLLQPGIAVLGVARSR 35 (243)
T ss_pred ceEEEecC------------------CcchHHHHHHHHHhCCCEEEEEecCc
Confidence 47999999 77789999999999999999998753
No 243
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=94.60 E-value=0.18 Score=42.81 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=24.9
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC--CeEEEEec
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYR 93 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~~ 93 (239)
|+||||+| ||..|.++|+.|+++| +.|+...+
T Consensus 1 ~~vlItGa------------------s~gIG~~ia~~l~~~~~~~~v~~~~~ 34 (235)
T PRK09009 1 MNILIVGG------------------SGGIGKAMVKQLLERYPDATVHATYR 34 (235)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHhCCCCEEEEEcc
Confidence 57999999 6667999999999986 45554444
No 244
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.59 E-value=0.057 Score=49.24 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=29.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.||++|||+|+. |+| .|.++|+.|+++||.|++..+
T Consensus 7 ~gk~alITGa~~---------------~~G-IG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGD---------------DQG-YGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCC---------------CCC-HHHHHHHHHHHCCCEEEEEec
Confidence 679999999931 256 599999999999999998543
No 245
>PLN02206 UDP-glucuronate decarboxylase
Probab=94.54 E-value=0.064 Score=51.53 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++++||||+| ||..|..++++|+++|++|+.+.+.
T Consensus 118 ~~~kILVTGa------------------tGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGG------------------AGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECc------------------ccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 6689999999 9999999999999999999988643
No 246
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.071 Score=45.72 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=28.7
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++||+| +|..|.++|+.|+++|++|+++.+.
T Consensus 2 ~vlItGa------------------s~giG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 2 EVLVTGG------------------DTDLGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred eEEEEeC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899988 6778999999999999999999875
No 247
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=94.12 E-value=0.15 Score=51.14 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=27.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (239)
..++||||+| +|..|.+++++|..+|++|.+
T Consensus 379 ~~mkiLVtGa------------------~G~iG~~l~~~L~~~g~~v~~ 409 (668)
T PLN02260 379 PSLKFLIYGR------------------TGWIGGLLGKLCEKQGIAYEY 409 (668)
T ss_pred CCceEEEECC------------------CchHHHHHHHHHHhCCCeEEe
Confidence 4478999998 999999999999999999853
No 248
>PLN02427 UDP-apiose/xylose synthase
Probab=94.01 E-value=0.1 Score=48.47 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~~ 95 (239)
+.++||||+| ||..|..+++.|+++ |++|+.+.+..
T Consensus 13 ~~~~VlVTGg------------------tGfIGs~lv~~L~~~~g~~V~~l~r~~ 49 (386)
T PLN02427 13 KPLTICMIGA------------------GGFIGSHLCEKLMTETPHKVLALDVYN 49 (386)
T ss_pred cCcEEEEECC------------------cchHHHHHHHHHHhcCCCEEEEEecCc
Confidence 6689999999 999999999999998 59999988653
No 249
>PLN00016 RNA-binding protein; Provisional
Probab=93.93 E-value=0.071 Score=49.51 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=33.0
Q ss_pred CCceEEEe----cCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVT----SGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlIT----sGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..++|||| +| ||..|..++++|+++||+|+.+.|...
T Consensus 51 ~~~~VLVt~~~~Ga------------------tG~iG~~lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 51 EKKKVLIVNTNSGG------------------HAFIGFYLAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred ccceEEEEeccCCC------------------ceeEhHHHHHHHHHCCCEEEEEecCCc
Confidence 44789999 66 999999999999999999999998754
No 250
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.93 E-value=0.094 Score=47.72 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC--CeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~~~ 94 (239)
.||+||||+| +|..|.++++.|+++| +.|+.+.+.
T Consensus 3 ~~k~vLVTGa------------------tG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 3 NNKSILITGG------------------TGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred CCCEEEEeCC------------------CCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 4699999999 8999999999999987 789888764
No 251
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.096 Score=44.39 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.0
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|++|||+| +|..|.++|++|+++|++|+++.++
T Consensus 2 ~~vlvtG~------------------sg~iG~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 2 KTVLIVGA------------------SRGIGREFVRQYRADGWRVIATARD 34 (222)
T ss_pred ceEEEEcC------------------CCchhHHHHHHHHhCCCEEEEEECC
Confidence 67999999 7788999999999999999999875
No 252
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.77 E-value=0.092 Score=46.33 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||..|..++++|+++|++|+.+.|+.+
T Consensus 8 tG~iG~~vv~~L~~~g~~V~~~~R~~~ 34 (285)
T TIGR03649 8 TGKTASRIARLLQAASVPFLVASRSSS 34 (285)
T ss_pred CChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence 999999999999999999999999754
No 253
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=93.76 E-value=0.085 Score=46.29 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=29.4
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||||+| ||..|.+++++|+++|++|+.+.|.
T Consensus 1 kilv~G~------------------tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGA------------------NGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcC------------------CCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 4789988 8999999999999999999999875
No 254
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.66 E-value=0.14 Score=43.13 Aligned_cols=27 Identities=37% Similarity=0.534 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||..|.+++++|+++|+.|+.+.+...
T Consensus 7 tG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 7 TGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp TSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred CCHHHHHHHHHHHHcCCcccccccccc
Confidence 999999999999999999998887655
No 255
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=93.51 E-value=0.13 Score=49.37 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+.++||||+| +|..|..++++|+++|++|+.+.+.
T Consensus 119 ~~mkILVTGa------------------tGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGG------------------AGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCCEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999 9999999999999999999998764
No 256
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.41 E-value=0.22 Score=45.79 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=25.4
Q ss_pred EEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC-eEEEEecC
Q 026403 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRR 94 (239)
Q Consensus 46 vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~~~ 94 (239)
||||+| +|..|.++++.+++.|. .++++.+.
T Consensus 1 VLVTGa------------------~GSIGseL~rql~~~~p~~lil~d~~ 32 (293)
T PF02719_consen 1 VLVTGA------------------GGSIGSELVRQLLRYGPKKLILFDRD 32 (293)
T ss_dssp EEEETT------------------TSHHHHHHHHHHHCCB-SEEEEEES-
T ss_pred CEEEcc------------------ccHHHHHHHHHHHhcCCCeEEEeCCC
Confidence 799999 99999999999999996 46666654
No 257
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=93.36 E-value=0.15 Score=45.90 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=29.6
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| +|..|.++|+.|+++|++|+.+.+.
T Consensus 1 m~vlVtGa------------------tG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 1 MRVLVTGG------------------SGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred CeEEEECC------------------CChHHHHHHHHHHHCCCeEEEEecC
Confidence 46999988 8999999999999999999998653
No 258
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=93.30 E-value=0.12 Score=46.91 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=28.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 2 ~~vlVtGa------------------tGfIG~~l~~~L~~~g~~~v~~~~~ 34 (355)
T PRK10217 2 RKILITGG------------------AGFIGSALVRYIINETSDAVVVVDK 34 (355)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHHcCCCEEEEEec
Confidence 68999999 9999999999999999987665543
No 259
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.19 E-value=0.56 Score=43.30 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=49.3
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-+.|.... .|.+|..+...++.+ +-++ .||+|.|-+. ||.||.-+|..|+++|
T Consensus 127 N~g~l~~~~~~~~PcTp~aii~lL~~~---~i~l--~Gk~V~vIG~------------------s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 127 NVGGLSQGRDVLTPCTPSGCLRLLEDT---CGDL--TGKHAVVIGR------------------SNIVGKPMAALLLQAH 183 (301)
T ss_pred hhhHHhcCCCCCCCCcHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCccHHHHHHHHHHCC
Confidence 3444555443 566888888777654 2346 7899999665 7899999999999999
Q ss_pred CeEEEEecCC
Q 026403 86 YAVIFLYRRG 95 (239)
Q Consensus 86 a~V~~i~~~~ 95 (239)
|.|++.|+..
T Consensus 184 atVtv~~~~t 193 (301)
T PRK14194 184 CSVTVVHSRS 193 (301)
T ss_pred CEEEEECCCC
Confidence 9999999753
No 260
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.13 E-value=0.52 Score=40.82 Aligned_cols=37 Identities=41% Similarity=0.461 Sum_probs=32.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+|-+.|||+| .||. |.+-||-+.+.|+.|+++.-|.|
T Consensus 8 kglvalvtgg-----------------asgl-g~ataerlakqgasv~lldlp~s 44 (260)
T KOG1199|consen 8 KGLVALVTGG-----------------ASGL-GKATAERLAKQGASVALLDLPQS 44 (260)
T ss_pred cCeeEEeecC-----------------cccc-cHHHHHHHHhcCceEEEEeCCcc
Confidence 6789999999 6885 99999999999999999986554
No 261
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.15 Score=42.72 Aligned_cols=34 Identities=26% Similarity=0.222 Sum_probs=30.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|++|||+| +|..|.++|+.|+++ ++|+.+.++.
T Consensus 3 ~~~vlVtG~------------------~g~iG~~l~~~l~~~-~~V~~~~r~~ 36 (227)
T PRK08219 3 RPTALITGA------------------SRGIGAAIARELAPT-HTLLLGGRPA 36 (227)
T ss_pred CCEEEEecC------------------CcHHHHHHHHHHHhh-CCEEEEeCCH
Confidence 378999999 889999999999999 9999999763
No 262
>PRK14982 acyl-ACP reductase; Provisional
Probab=92.92 E-value=0.41 Score=44.88 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=30.6
Q ss_pred CCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-C-CeEEEEecC
Q 026403 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-G-YAVIFLYRR 94 (239)
Q Consensus 38 ~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-G-a~V~~i~~~ 94 (239)
++ .+|+|+||++ +|.+|..+|+.++.+ | ..|+++.|.
T Consensus 152 ~l--~~k~VLVtGA------------------tG~IGs~lar~L~~~~gv~~lilv~R~ 190 (340)
T PRK14982 152 DL--SKATVAVVGA------------------TGDIGSAVCRWLDAKTGVAELLLVARQ 190 (340)
T ss_pred Cc--CCCEEEEEcc------------------ChHHHHHHHHHHHhhCCCCEEEEEcCC
Confidence 46 6799999998 999999999999864 6 477777653
No 263
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=92.87 E-value=0.18 Score=44.41 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=21.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEe
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
||..|..++++|+++|++|+++.
T Consensus 6 ~GfiG~~l~~~L~~~g~~v~~~~ 28 (306)
T PLN02725 6 RGLVGSAIVRKLEALGFTNLVLR 28 (306)
T ss_pred CCcccHHHHHHHHhCCCcEEEee
Confidence 99999999999999999988664
No 264
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.82 E-value=0.19 Score=44.22 Aligned_cols=34 Identities=32% Similarity=0.306 Sum_probs=31.2
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.||||+| ||..|..+++.|+.+|++|+.+.+...
T Consensus 2 ~ILVtG~------------------tGfiG~~l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 2 RILVTGG------------------AGFIGSHLVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred eEEEEcC------------------cccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 4999999 999999999999999999999998644
No 265
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=92.80 E-value=0.17 Score=45.09 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=28.2
Q ss_pred EEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 46 vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
||||+| +|..|..+++.|+++|++|+.+.+.
T Consensus 2 ilVtGa------------------~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGG------------------AGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecC------------------CcHHHHHHHHHHHhCCCceEEEecC
Confidence 789998 9999999999999999988887765
No 266
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=92.66 E-value=0.8 Score=53.07 Aligned_cols=38 Identities=18% Similarity=0.071 Sum_probs=28.4
Q ss_pred ccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecC
Q 026403 56 PLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (239)
Q Consensus 56 pID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~ 94 (239)
+|+.+.|=.||--+.| .|.++|++|+++ |+.|+++.|.
T Consensus 1993 ~l~~g~vvLVTGGarG-IG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1993 ALNSDDVFLVTGGAKG-VTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred ccCCCCEEEEeCCCCH-HHHHHHHHHHHhcCCEEEEEeCC
Confidence 3555556566655666 599999999998 6999988765
No 267
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=92.56 E-value=0.46 Score=40.01 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++++++|.+| +|..|.++|+.|++.|++|+++.|.
T Consensus 27 ~~~~vlVlGg------------------tG~iG~~~a~~l~~~g~~V~l~~R~ 61 (194)
T cd01078 27 KGKTAVVLGG------------------TGPVGQRAAVLLAREGARVVLVGRD 61 (194)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 6799999999 8999999999999999999999764
No 268
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=92.40 E-value=0.2 Score=43.67 Aligned_cols=27 Identities=37% Similarity=0.416 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||..|..++++|+++|++|+.+.|...
T Consensus 7 tG~iG~~l~~~L~~~g~~V~~~~r~~~ 33 (292)
T TIGR01777 7 TGFIGRALTQRLTKDGHEVTILTRSPP 33 (292)
T ss_pred cchhhHHHHHHHHHcCCEEEEEeCCCC
Confidence 999999999999999999999998754
No 269
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=92.37 E-value=0.19 Score=46.67 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=35.9
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
|+|+||+|||=-.|= .|.++|+++.++||+|.|+.++...
T Consensus 2 ~~i~~~~GGTGGHi~--------------Pala~a~~l~~~g~~v~~vg~~~~~ 41 (352)
T PRK12446 2 KKIVFTGGGSAGHVT--------------PNLAIIPYLKEDNWDISYIGSHQGI 41 (352)
T ss_pred CeEEEEcCCcHHHHH--------------HHHHHHHHHHhCCCEEEEEECCCcc
Confidence 689999999998888 5999999999999999999977653
No 270
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=92.03 E-value=0.35 Score=44.19 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.3
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||||++ +|+.|.+|++.+. .+++|+.+.++
T Consensus 2 ~iLi~G~------------------~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 2 KILITGA------------------NGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred cEEEEcC------------------CChHHHHHHHHhC-CCceEEeccCc
Confidence 4899988 9999999999998 77999998765
No 271
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=91.76 E-value=0.082 Score=46.23 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=23.4
Q ss_pred CccHHHHHHHHHHHHCCC--eEEEEecCCC
Q 026403 69 SSGHRGAASTEHLIKMGY--AVIFLYRRGT 96 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga--~V~~i~~~~s 96 (239)
+||..|..+.+.+++.+. .|+++.|..+
T Consensus 4 aTGflG~~ll~~Ll~~~~~~~I~cLvR~~~ 33 (249)
T PF07993_consen 4 ATGFLGSHLLEELLRQPPDVKIYCLVRASS 33 (249)
T ss_dssp TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEEEEeCcc
Confidence 599999999999999887 8999998754
No 272
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=91.67 E-value=0.3 Score=44.51 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=29.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~ 94 (239)
++||||+| +|..|..+++.|+++ |++|+.+.+.
T Consensus 2 ~~ilVtGa------------------tGfiGs~l~~~L~~~~~~~V~~~~r~ 35 (347)
T PRK11908 2 KKVLILGV------------------NGFIGHHLSKRILETTDWEVYGMDMQ 35 (347)
T ss_pred cEEEEECC------------------CcHHHHHHHHHHHhCCCCeEEEEeCc
Confidence 57999999 999999999999986 7999998864
No 273
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.25 E-value=1.1 Score=41.14 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=49.6
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-++|...+ .|.+|..+.+.++.+ +-++ .||+|+|-+. ||.+|.-+|..|+++
T Consensus 125 ~N~g~l~~~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~v~vIG~------------------S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 125 MNTGHLWSGRPVMIPCTPAGIMEMFREY---NVEL--EGKHAVVIGR------------------SNIVGKPMAQLLLDK 181 (284)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcCcHHHHHHHHHC
Confidence 44555665543 577888888777643 2246 7899999766 999999999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 182 gatVtv~~s~ 191 (284)
T PRK14179 182 NATVTLTHSR 191 (284)
T ss_pred CCEEEEECCC
Confidence 9999998643
No 274
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.22 E-value=1.2 Score=40.80 Aligned_cols=64 Identities=19% Similarity=0.124 Sum_probs=49.2
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-+.|.... .|.+|..|...++.+- -++ .||+|+|.+. |+..|.-+|..|..+|
T Consensus 126 n~g~l~~~~~~~~PcTp~ai~~ll~~~~---i~l--~Gk~vvVIGr------------------s~~VG~pla~lL~~~g 182 (286)
T PRK14175 126 NIGKLYIDEQTFVPCTPLGIMEILKHAD---IDL--EGKNAVVIGR------------------SHIVGQPVSKLLLQKN 182 (286)
T ss_pred chHhHhcCCCCCCCCcHHHHHHHHHHcC---CCC--CCCEEEEECC------------------CchhHHHHHHHHHHCC
Confidence 3444454433 5668888887776541 246 7899999998 7889999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
+.|+.+|+.
T Consensus 183 atVtv~~s~ 191 (286)
T PRK14175 183 ASVTILHSR 191 (286)
T ss_pred CeEEEEeCC
Confidence 999999974
No 275
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=91.21 E-value=0.21 Score=39.05 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=28.2
Q ss_pred EEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 46 vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|+|+++||.-.+- -..++|++|.++||+|.+...+
T Consensus 1 Ili~~~Gt~Ghv~--------------P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHVY--------------PFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHHH--------------HHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHHH--------------HHHHHHHHHhccCCeEEEeecc
Confidence 6788888877777 3889999999999999977754
No 276
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.14 E-value=1.5 Score=40.44 Aligned_cols=63 Identities=11% Similarity=-0.003 Sum_probs=47.5
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-.+|.... .|.+|..|...++.+- -++ .||+|+|-+. ||.||..+|..|+++|
T Consensus 126 n~g~l~~~~~~~~PcTp~ai~~ll~~~~---i~~--~Gk~V~viGr------------------s~~mG~PmA~~L~~~g 182 (296)
T PRK14188 126 NAGRLATGETALVPCTPLGCMMLLRRVH---GDL--SGLNAVVIGR------------------SNLVGKPMAQLLLAAN 182 (296)
T ss_pred hHHHHhCCCCCCcCCCHHHHHHHHHHhC---CCC--CCCEEEEEcC------------------CcchHHHHHHHHHhCC
Confidence 3444554433 5668888887766531 246 7899999665 8999999999999999
Q ss_pred CeEEEEec
Q 026403 86 YAVIFLYR 93 (239)
Q Consensus 86 a~V~~i~~ 93 (239)
|.|+..|.
T Consensus 183 ~tVtv~~~ 190 (296)
T PRK14188 183 ATVTIAHS 190 (296)
T ss_pred CEEEEECC
Confidence 99999974
No 277
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=91.07 E-value=0.36 Score=42.75 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=31.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|..||||+| +||. |.++|+.|...|-.||+--|+.
T Consensus 4 tgnTiLITGG-----------------~sGI-Gl~lak~f~elgN~VIi~gR~e 39 (245)
T COG3967 4 TGNTILITGG-----------------ASGI-GLALAKRFLELGNTVIICGRNE 39 (245)
T ss_pred cCcEEEEeCC-----------------cchh-hHHHHHHHHHhCCEEEEecCcH
Confidence 5689999999 7886 9999999999999998776653
No 278
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=90.94 E-value=0.38 Score=42.37 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=28.0
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+||||+| ||..|..+++.|+++|++|+.+.+
T Consensus 1 kvlV~Ga------------------tG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGG------------------AGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CEEEeCC------------------CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5889988 999999999999999999988754
No 279
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=90.81 E-value=0.25 Score=42.95 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=29.1
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEPY 100 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~ 100 (239)
.||+-|..|++++++||++||-|.|+.+..+-
T Consensus 8 AsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~ 39 (211)
T COG2910 8 ASGKAGSRILKEALKRGHEVTAIVRNASKLAA 39 (211)
T ss_pred cCchhHHHHHHHHHhCCCeeEEEEeChHhccc
Confidence 59999999999999999999999999886653
No 280
>PRK08309 short chain dehydrogenase; Provisional
Probab=90.80 E-value=0.46 Score=40.11 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=26.7
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++++||+| || +|.++++.|.++||+|+++.+.
T Consensus 1 m~vlVtGG------------------tG-~gg~la~~L~~~G~~V~v~~R~ 32 (177)
T PRK08309 1 MHALVIGG------------------TG-MLKRVSLWLCEKGFHVSVIARR 32 (177)
T ss_pred CEEEEECc------------------CH-HHHHHHHHHHHCcCEEEEEECC
Confidence 46899998 57 5666999999999999998764
No 281
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=90.75 E-value=0.38 Score=43.01 Aligned_cols=27 Identities=33% Similarity=0.426 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHHHHCC--CeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMG--YAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G--a~V~~i~~~~s 96 (239)
||..|..+++.|+++| +.|+.+.|..+
T Consensus 8 tG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 8 TGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred chHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 9999999999999999 77999988643
No 282
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=90.72 E-value=0.39 Score=41.10 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=25.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
||..|..+++++++.|+.|..+.|+.
T Consensus 7 tG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 7 TGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp TSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred ccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 99999999999999999999999985
No 283
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=89.92 E-value=0.49 Score=40.73 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=32.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
++||||+| ||..|.++++.++++|+.|..+.|+...
T Consensus 1 ~~ilV~Ga------------------tG~~G~~~~~~L~~~~~~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGA------------------TGFVGGAVVRELLARGHEVRAAVRNPEA 36 (275)
T ss_pred CeEEEEec------------------ccchHHHHHHHHHhCCCEEEEEEeCHHH
Confidence 36899999 9999999999999999999999998553
No 284
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=89.69 E-value=0.54 Score=42.68 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=26.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
++||||+| ||..|..+++.|+++|+.+++..
T Consensus 1 mkilITGg------------------tG~iG~~l~~~L~~~g~~~v~~~ 31 (352)
T PRK10084 1 MKILVTGG------------------AGFIGSAVVRHIINNTQDSVVNV 31 (352)
T ss_pred CeEEEECC------------------CcHHhHHHHHHHHHhCCCeEEEe
Confidence 36999999 99999999999999998755443
No 285
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=89.67 E-value=1.1 Score=41.46 Aligned_cols=37 Identities=32% Similarity=0.463 Sum_probs=33.5
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
+|++|||+= ||+=|+-+|+.++..||+|.=+.|..+.
T Consensus 2 ~K~ALITGI------------------TGQDGsYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 2 GKVALITGI------------------TGQDGSYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred CceEEEecc------------------cCCchHHHHHHHHhcCcEEEEEeecccc
Confidence 588999975 9999999999999999999999998664
No 286
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=89.02 E-value=0.77 Score=39.60 Aligned_cols=33 Identities=15% Similarity=0.359 Sum_probs=30.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.||+|||-+| |.+|...|+.|++.|++|+++..
T Consensus 9 ~~k~vLVIGg-------------------G~va~~ka~~Ll~~ga~V~VIs~ 41 (202)
T PRK06718 9 SNKRVVIVGG-------------------GKVAGRRAITLLKYGAHIVVISP 41 (202)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCeEEEEcC
Confidence 6799999988 78999999999999999999974
No 287
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.91 E-value=2 Score=37.40 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=30.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|++|++|+- -.| .|.++...+.+.|+.|+-++|+.
T Consensus 6 aG~~vlvTga-----------------gaG-IG~~~v~~La~aGA~ViAvaR~~ 41 (245)
T KOG1207|consen 6 AGVIVLVTGA-----------------GAG-IGKEIVLSLAKAGAQVIAVARNE 41 (245)
T ss_pred cceEEEeecc-----------------ccc-ccHHHHHHHHhcCCEEEEEecCH
Confidence 7799999985 244 49999999999999999999874
No 288
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=88.81 E-value=1.1 Score=43.48 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=47.4
Q ss_pred CceEEEecCCccc-----ccCCCCeeeeecCC---------------ccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 43 RRVACVTSGGTTV-----PLEQRCVRYIDNFS---------------SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 43 ~k~vlITsGgT~e-----pID~~~VR~ItN~S---------------SG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.++|+|.+|.... ++| ..|++||.. .|-.|..+|..|.+.|.+|++|.+...+.|
T Consensus 136 a~~iiIATGS~p~~~~~~~~~--~~~~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iLp 210 (454)
T COG1249 136 ADNIIIATGSRPRIPPGPGID--GARILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRILP 210 (454)
T ss_pred eCEEEEcCCCCCcCCCCCCCC--CCeEEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCC
Confidence 3789999998754 467 899999854 699999999999999999999999888776
No 289
>PRK12320 hypothetical protein; Provisional
Probab=88.71 E-value=0.66 Score=47.44 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=30.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| +|..|..+++.++++|++|+.+.+.
T Consensus 1 MkILVTGA------------------aGFIGs~La~~Ll~~G~~Vi~ldr~ 33 (699)
T PRK12320 1 MQILVTDA------------------TGAVGRSVTRQLIAAGHTVSGIAQH 33 (699)
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 37999999 9999999999999999999999864
No 290
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=88.67 E-value=0.84 Score=43.25 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=29.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+|+||+| |+.|.++|+.|+++||+|+++...
T Consensus 4 ~~k~v~iiG~-------------------g~~G~~~A~~l~~~G~~V~~~d~~ 37 (450)
T PRK14106 4 KGKKVLVVGA-------------------GVSGLALAKFLKKLGAKVILTDEK 37 (450)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5699999976 448999999999999999998865
No 291
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=88.62 E-value=0.85 Score=37.80 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=29.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
.||+|||-+| |+.|...|+.|++.|++|++|.
T Consensus 12 ~~~~vlVvGG-------------------G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 12 HNKVVVIIGG-------------------GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEc
Confidence 6799999988 7889999999999999999995
No 292
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.46 E-value=1.8 Score=41.17 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=29.1
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH-CCCeEEEEecCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK-MGYAVIFLYRRGT 96 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~-~Ga~V~~i~~~~s 96 (239)
++||+|++ ||-+|+.+..+++. +-++|+.+-|-.+
T Consensus 1 ~~vlLTGA------------------TGFLG~yLl~eLL~~~~~kv~cLVRA~s 36 (382)
T COG3320 1 RNVLLTGA------------------TGFLGAYLLLELLDRSDAKVICLVRAQS 36 (382)
T ss_pred CeEEEecC------------------chHhHHHHHHHHHhcCCCcEEEEEecCC
Confidence 46889988 99999888888875 5579999998766
No 293
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=88.30 E-value=0.6 Score=42.82 Aligned_cols=27 Identities=41% Similarity=0.402 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||..|.+|...+.+.|+.|+.+.|...
T Consensus 7 TGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 7 TGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred ccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 999999999999999999999999754
No 294
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=88.25 E-value=2 Score=36.13 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHH-HHHHHHHHHHCCCeEEEEecC
Q 026403 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHR-GAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 19 ~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~-G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|..+..+++.+++... ++ .||+|||.+. |.| |..+|++|.++|+.|+++++.
T Consensus 25 p~~~~a~v~l~~~~~~---~l--~gk~vlViG~-------------------G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 25 PCTPAGILELLKRYGI---DL--AGKKVVVVGR-------------------SNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CChHHHHHHHHHHcCC---CC--CCCEEEEECC-------------------cHHHHHHHHHHHhhCCCEEEEEECC
Confidence 4456666665555432 46 7799999876 555 888999999999999999975
No 295
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.02 E-value=3.9 Score=37.48 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=49.7
Q ss_pred chhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH
Q 026403 6 NSEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK 83 (239)
Q Consensus 6 ~~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~ 83 (239)
..+.-+.|.... .|.+|..+...++.+- -++ .||+|+|-++ |..-|.-+|..|+.
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~---i~l--~Gk~vvVvGr------------------s~~VG~Pla~lL~~ 179 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYH---IEI--KGKDVVIIGA------------------SNIVGKPLAMLMLN 179 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CchhHHHHHHHHHH
Confidence 334445554433 5678888887776541 246 7899999998 77789999999999
Q ss_pred CCCeEEEEecC
Q 026403 84 MGYAVIFLYRR 94 (239)
Q Consensus 84 ~Ga~V~~i~~~ 94 (239)
+||.|+..|..
T Consensus 180 ~gAtVtv~hs~ 190 (285)
T PRK14191 180 AGASVSVCHIL 190 (285)
T ss_pred CCCEEEEEeCC
Confidence 99999999853
No 296
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=87.94 E-value=2.9 Score=35.85 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=29.6
Q ss_pred CCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 37 SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 37 ~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
.++ +||+|+|++. |.+|..+|+.|.+.|++|+...
T Consensus 24 ~~l--~gk~v~I~G~-------------------G~vG~~~A~~L~~~G~~Vvv~D 58 (200)
T cd01075 24 DSL--EGKTVAVQGL-------------------GKVGYKLAEHLLEEGAKLIVAD 58 (200)
T ss_pred CCC--CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEc
Confidence 356 7799998875 7899999999999999999554
No 297
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=87.71 E-value=0.62 Score=43.57 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+++||||+| .|-.|.+.+-+++++||.|+.+--
T Consensus 2 ~~~VLVtGg------------------aGyiGsht~l~L~~~gy~v~~vDN 34 (343)
T KOG1371|consen 2 GKHVLVTGG------------------AGYIGSHTVLALLKRGYGVVIVDN 34 (343)
T ss_pred CcEEEEecC------------------CcceehHHHHHHHhCCCcEEEEec
Confidence 589999999 899999999999999999999873
No 298
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=87.34 E-value=0.96 Score=45.33 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=30.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC--CCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM--GYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~--Ga~V~~i~~~ 94 (239)
+.|+||||+| ||..|..+++.|+++ |++|+.+.+.
T Consensus 5 ~~~~VLVTGa------------------tGfIG~~lv~~Ll~~g~~~~V~~~d~~ 41 (668)
T PLN02260 5 EPKNILITGA------------------AGFIASHVANRLIRNYPDYKIVVLDKL 41 (668)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5699999999 999999999999998 6888877653
No 299
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=87.12 E-value=0.95 Score=42.05 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=30.1
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| .|-.|+..+.+|+++|++|+.+-.-
T Consensus 1 ~~iLVtGG------------------AGYIGSHtv~~Ll~~G~~vvV~DNL 33 (329)
T COG1087 1 MKVLVTGG------------------AGYIGSHTVRQLLKTGHEVVVLDNL 33 (329)
T ss_pred CeEEEecC------------------cchhHHHHHHHHHHCCCeEEEEecC
Confidence 47999999 8999999999999999999999743
No 300
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=86.98 E-value=0.78 Score=35.04 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=29.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||+|||.+| |..|..=++.|++.|++|++++..
T Consensus 6 ~~~~vlVvGg-------------------G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 6 KGKRVLVVGG-------------------GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp TT-EEEEEEE-------------------SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEECCc
Confidence 6799999887 778999999999999999999966
No 301
>PRK05865 hypothetical protein; Provisional
Probab=86.82 E-value=1 Score=47.12 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=30.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++||||+| ||..|.++++.|+.+|++|+.+.+.
T Consensus 1 MkILVTGA------------------TGfIGs~La~~Ll~~G~~Vv~l~R~ 33 (854)
T PRK05865 1 MRIAVTGA------------------SGVLGRGLTARLLSQGHEVVGIARH 33 (854)
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHHCcCEEEEEECC
Confidence 47999999 9999999999999999999999875
No 302
>PRK07201 short chain dehydrogenase; Provisional
Probab=86.29 E-value=1 Score=44.52 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.7
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHH--HCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI--KMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~--~~Ga~V~~i~~~~ 95 (239)
++||||+| ||..|..+++.|+ .+|+.|+.+.|+.
T Consensus 1 m~ILVTGa------------------tGfIG~~lv~~Ll~~~~g~~V~~l~R~~ 36 (657)
T PRK07201 1 MRYFVTGG------------------TGFIGRRLVSRLLDRRREATVHVLVRRQ 36 (657)
T ss_pred CeEEEeCC------------------ccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 37999999 9999999999999 5999999999853
No 303
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=86.06 E-value=1.7 Score=32.37 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=21.6
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHH--HHHHHHHCCCeEEEEec
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMGYAVIFLYR 93 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~--iAe~~~~~Ga~V~~i~~ 93 (239)
.|+|||+++ |||- |.+ ||-+| ..|++.+=++-
T Consensus 39 pK~VLViGa-----------------StGy-GLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGA-----------------STGY-GLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp -SEEEEES------------------SSHH-HHHHHHHHHH-CC--EEEEEE-
T ss_pred CceEEEEec-----------------CCcc-cHHHHHHHHh-cCCCCEEEEee
Confidence 499999999 8886 877 66655 68888877764
No 304
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.87 E-value=4.3 Score=37.18 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=48.8
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-+.|.... .|..|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+++
T Consensus 124 ~N~g~l~~~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvVvGr------------------S~iVGkPla~lL~~~ 180 (284)
T PRK14170 124 VNVGNLFIGKDSFVPCTPAGIIELIKST---GTQI--EGKRAVVIGR------------------SNIVGKPVAQLLLNE 180 (284)
T ss_pred hhhhHHhCCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcchHHHHHHHHHC
Confidence 34445554433 567888888777543 1246 7899999887 778899999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 181 ~atVtichs~ 190 (284)
T PRK14170 181 NATVTIAHSR 190 (284)
T ss_pred CCEEEEeCCC
Confidence 9999999964
No 305
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=85.29 E-value=1.3 Score=39.56 Aligned_cols=39 Identities=28% Similarity=0.371 Sum_probs=29.0
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
|+|+|++||+.-.+. ....+|++|.++|++|+++.++..
T Consensus 1 ~~i~~~~g~~~g~~~--------------~~~~La~~L~~~g~eV~vv~~~~~ 39 (348)
T TIGR01133 1 KKVVLAAGGTGGHIF--------------PALAVAEELIKRGVEVLWLGTKRG 39 (348)
T ss_pred CeEEEEeCccHHHHh--------------HHHHHHHHHHhCCCEEEEEeCCCc
Confidence 367788886644443 234899999999999999987543
No 306
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.07 E-value=5.8 Score=36.38 Aligned_cols=64 Identities=17% Similarity=0.120 Sum_probs=48.7
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-++|.... .|.+|..+.+.++.+- -++ .||+|+|.+. |..-|.-+|..|+.+|
T Consensus 127 n~g~l~~~~~~~~PcTp~av~~ll~~~~---i~l--~Gk~vvViGr------------------s~iVG~Pla~lL~~~~ 183 (285)
T PRK10792 127 NVGRLAQRIPLLRPCTPRGIMTLLERYG---IDT--YGLNAVVVGA------------------SNIVGRPMSLELLLAG 183 (285)
T ss_pred hHhHHhCCCCCCCCCCHHHHHHHHHHcC---CCC--CCCEEEEECC------------------CcccHHHHHHHHHHCC
Confidence 3444454433 5678888887776541 246 7899999887 7778999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
|.|+..|+.
T Consensus 184 atVtv~hs~ 192 (285)
T PRK10792 184 CTVTVCHRF 192 (285)
T ss_pred CeEEEEECC
Confidence 999999975
No 307
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=84.68 E-value=2.1 Score=30.68 Aligned_cols=29 Identities=24% Similarity=0.327 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCE 98 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s~~ 98 (239)
.|-.|..+|.++..+|.+|+++++...+.
T Consensus 7 gG~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 7 GGFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 47789999999999999999999886644
No 308
>PRK06849 hypothetical protein; Provisional
Probab=84.66 E-value=1.9 Score=40.32 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=29.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+||||+|+ ..-|..+|+.|.++|++|+++...
T Consensus 3 ~~~~VLI~G~~------------------~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGAR------------------APAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCC------------------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56999999993 225999999999999999999765
No 309
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.26 E-value=6 Score=36.25 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=49.0
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-++|.+.. .|.+|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+++
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~~VG~Pla~lL~~~ 180 (281)
T PRK14183 124 YNVGRLVTGLDGFVPCTPLGVMELLEEY---EIDV--KGKDVCVVGA------------------SNIVGKPMAALLLNA 180 (281)
T ss_pred hhhhHHhcCCCCCCCCcHHHHHHHHHHc---CCCC--CCCEEEEECC------------------CCcchHHHHHHHHHC
Confidence 34455665543 566888888766544 1256 7899999988 777799999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 181 ~AtVti~hs~ 190 (281)
T PRK14183 181 NATVDICHIF 190 (281)
T ss_pred CCEEEEeCCC
Confidence 9999988854
No 310
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=84.02 E-value=1.3 Score=37.35 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..||-.|+..|++|+++...
T Consensus 7 aG~mG~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 7 AGTMGRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred CCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999864
No 311
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=83.99 E-value=1.7 Score=38.44 Aligned_cols=37 Identities=38% Similarity=0.388 Sum_probs=32.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..|+++||+| |+|. |.+||..|.+.||.|.......+
T Consensus 13 ~sk~~~vtGg-----------------~sGI-GrAia~~la~~Garv~v~dl~~~ 49 (256)
T KOG1200|consen 13 MSKVAAVTGG-----------------SSGI-GRAIAQLLAKKGARVAVADLDSA 49 (256)
T ss_pred hcceeEEecC-----------------CchH-HHHHHHHHHhcCcEEEEeecchh
Confidence 4589999999 8896 99999999999999999987654
No 312
>PLN02996 fatty acyl-CoA reductase
Probab=83.77 E-value=1.6 Score=42.53 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC---eEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY---AVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga---~V~~i~~~~s 96 (239)
+||.||||+| ||-.|..+++.+++.+. .|+++.|+..
T Consensus 10 ~~k~VlvTGa------------------TGFlG~~ll~~LL~~~~~v~~I~~LvR~~~ 49 (491)
T PLN02996 10 ENKTILVTGA------------------TGFLAKIFVEKILRVQPNVKKLYLLLRASD 49 (491)
T ss_pred CCCeEEEeCC------------------CcHHHHHHHHHHHhhCCCCCEEEEEEeCCC
Confidence 6799999999 99999999999998764 4677777643
No 313
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=83.35 E-value=7.2 Score=35.81 Aligned_cols=64 Identities=11% Similarity=0.070 Sum_probs=48.6
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-.+|.... .|.+|..|...++.+ +-++ .||+|+|.+. |..-|.-+|..|..+|
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~---~i~l--~Gk~vvViGr------------------s~iVGkPla~lL~~~~ 188 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEY---GVDI--EGKNAVIVGH------------------SNVVGKPMAAMLLNRN 188 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHc---CCCC--CCCEEEEECC------------------CcccHHHHHHHHHHCC
Confidence 3444554433 567888888777654 1246 7899999887 7778999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
|.|+..|..
T Consensus 189 atVtv~hs~ 197 (287)
T PRK14176 189 ATVSVCHVF 197 (287)
T ss_pred CEEEEEecc
Confidence 999999964
No 314
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=82.42 E-value=7 Score=31.94 Aligned_cols=54 Identities=19% Similarity=0.044 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+..++.+...++.+ +-++ +||+|+|=+. |+.-|..+|..+.++|+.|+..|..
T Consensus 8 ~p~t~~a~~~ll~~~---~~~~--~gk~v~VvGr------------------s~~vG~pla~lL~~~gatV~~~~~~ 61 (140)
T cd05212 8 VSPVAKAVKELLNKE---GVRL--DGKKVLVVGR------------------SGIVGAPLQCLLQRDGATVYSCDWK 61 (140)
T ss_pred cccHHHHHHHHHHHc---CCCC--CCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEeCCC
Confidence 345666666666543 2356 7899999776 7788999999999999999999964
No 315
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=82.12 E-value=1.7 Score=39.72 Aligned_cols=37 Identities=35% Similarity=0.533 Sum_probs=32.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.+|++|||+= ||+-|.-+||.++..||+|.=|-|.+|
T Consensus 27 ~rkvALITGI------------------tGQDGSYLaEfLL~KgYeVHGiiRRsS 63 (376)
T KOG1372|consen 27 PRKVALITGI------------------TGQDGSYLAEFLLSKGYEVHGIIRRSS 63 (376)
T ss_pred cceEEEEecc------------------cCCCchHHHHHHHhCCceeeEEEeecc
Confidence 5678899875 899999999999999999998888766
No 316
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=81.95 E-value=8.8 Score=35.40 Aligned_cols=64 Identities=16% Similarity=0.119 Sum_probs=48.5
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-++|.... .|..|..|...++.+ +-++ .||+|+|-+. |..-|.-+|..|.++|
T Consensus 126 n~g~l~~~~~~~~PcTp~aii~lL~~~---~i~l--~Gk~vvVIGr------------------S~iVGkPla~lL~~~~ 182 (297)
T PRK14186 126 NLGRLVKGEPGLRSCTPAGVMRLLRSQ---QIDI--AGKKAVVVGR------------------SILVGKPLALMLLAAN 182 (297)
T ss_pred hHHHHhCCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccchHHHHHHHHHCC
Confidence 4445554433 567888888777654 1246 7899999887 7788999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
|.|+..|..
T Consensus 183 atVtv~hs~ 191 (297)
T PRK14186 183 ATVTIAHSR 191 (297)
T ss_pred CEEEEeCCC
Confidence 999999965
No 317
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=81.46 E-value=2.4 Score=40.07 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=29.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+|+||++ .| .|.++|+.|+++|+.|++.-..
T Consensus 4 ~~k~v~v~G~------------------g~-~G~s~a~~l~~~G~~V~~~d~~ 37 (447)
T PRK02472 4 QNKKVLVLGL------------------AK-SGYAAAKLLHKLGANVTVNDGK 37 (447)
T ss_pred CCCEEEEEee------------------CH-HHHHHHHHHHHCCCEEEEEcCC
Confidence 5689999998 34 8999999999999999988643
No 318
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=80.81 E-value=3.4 Score=35.58 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|.||.++|..+.+.|++|+++.+.
T Consensus 9 ~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 9 TGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 8999999999999999999988764
No 319
>PLN02503 fatty acyl-CoA reductase 2
Probab=80.81 E-value=2.2 Score=42.94 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC---eEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY---AVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga---~V~~i~~~~s 96 (239)
+||.||||+| ||-+|..+++.+++.+. .|+++.|+..
T Consensus 118 ~~k~VlVTGa------------------TGFLGk~LlekLLr~~~~v~kIy~LvR~k~ 157 (605)
T PLN02503 118 RGKNFLITGA------------------TGFLAKVLIEKILRTNPDVGKIYLLIKAKD 157 (605)
T ss_pred cCCEEEEcCC------------------chHHHHHHHHHHHHhCCCCcEEEEEEecCC
Confidence 6799999999 99999999999998775 4688877643
No 320
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=80.57 E-value=12 Score=34.46 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=48.2
Q ss_pred hHHhhhhcC---CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 8 EIESFFDSA---PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 8 ~~~~f~~~~---~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
+.-+.|... -.|.+|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+++
T Consensus 120 n~g~l~~g~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~~ 176 (287)
T PRK14181 120 NMGKLLLGETDGFIPCTPAGIIELLKYY---EIPL--HGRHVAIVGR------------------SNIVGKPLAALLMQK 176 (287)
T ss_pred hHHHHhcCCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccchHHHHHHHHhC
Confidence 444555543 2577888888777644 1246 7899999877 777899999999999
Q ss_pred ----CCeEEEEecC
Q 026403 85 ----GYAVIFLYRR 94 (239)
Q Consensus 85 ----Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 177 ~~~~~AtVtvchs~ 190 (287)
T PRK14181 177 HPDTNATVTLLHSQ 190 (287)
T ss_pred cCCCCCEEEEeCCC
Confidence 8999999864
No 321
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=80.44 E-value=11 Score=34.48 Aligned_cols=64 Identities=9% Similarity=0.161 Sum_probs=48.9
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-+.|.... .|.+|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+.+|
T Consensus 124 N~g~l~~~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~~~ 180 (282)
T PRK14169 124 SVGRLWANEPTVVASTPYGIMALLDAY---DIDV--AGKRVVIVGR------------------SNIVGRPLAGLMVNHD 180 (282)
T ss_pred hhHHHhcCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccchHHHHHHHHHCC
Confidence 4444555433 577888888777654 1246 7899999877 7888999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
|.|+..|..
T Consensus 181 atVtichs~ 189 (282)
T PRK14169 181 ATVTIAHSK 189 (282)
T ss_pred CEEEEECCC
Confidence 999999965
No 322
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=80.27 E-value=2.8 Score=38.88 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++|+||+| -|..|+.|++-|+-.|++||.+--.
T Consensus 26 ~~lrI~itGg------------------aGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 26 QNLRILITGG------------------AGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred CCcEEEEecC------------------cchHHHHHHHHHHhcCCeEEEEecc
Confidence 5699999999 7999999999999999999988743
No 323
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=80.16 E-value=11 Score=34.51 Aligned_cols=65 Identities=12% Similarity=0.037 Sum_probs=49.8
Q ss_pred hhHHhhhhc-C--CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH
Q 026403 7 SEIESFFDS-A--PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK 83 (239)
Q Consensus 7 ~~~~~f~~~-~--~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~ 83 (239)
.+.-++|.. . -.|.+|..+...++.+- -++ .||+|+|-+. |..-|.-+|..|++
T Consensus 123 ~N~g~l~~g~~~~~~PcTp~avi~lL~~y~---i~l--~Gk~vvVvGr------------------S~iVGkPla~lL~~ 179 (282)
T PRK14166 123 INVGYLNLGLESGFLPCTPLGVMKLLKAYE---IDL--EGKDAVIIGA------------------SNIVGRPMATMLLN 179 (282)
T ss_pred hhhHHHhcCCCCCCcCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CCcchHHHHHHHHH
Confidence 344556655 2 25778999888776541 246 7899999776 77789999999999
Q ss_pred CCCeEEEEecC
Q 026403 84 MGYAVIFLYRR 94 (239)
Q Consensus 84 ~Ga~V~~i~~~ 94 (239)
+||.|+..|..
T Consensus 180 ~~atVt~chs~ 190 (282)
T PRK14166 180 AGATVSVCHIK 190 (282)
T ss_pred CCCEEEEeCCC
Confidence 99999999964
No 324
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=79.87 E-value=12 Score=34.42 Aligned_cols=64 Identities=17% Similarity=0.081 Sum_probs=48.6
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-..|.... .|.+|..+...++.+ +-++ .||+|+|-+. |+.-|.-+|..|+.+|
T Consensus 127 n~g~l~~g~~~~~PcTp~avi~ll~~y---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~~~ 183 (284)
T PRK14177 127 SFGKLSMGVETYLPCTPYGMVLLLKEY---GIDV--TGKNAVVVGR------------------SPILGKPMAMLLTEMN 183 (284)
T ss_pred hHHHHHcCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcchHHHHHHHHHCC
Confidence 3444554433 566888888766654 2356 7899999887 7788999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
|.|+..|..
T Consensus 184 atVt~chs~ 192 (284)
T PRK14177 184 ATVTLCHSK 192 (284)
T ss_pred CEEEEeCCC
Confidence 999999964
No 325
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=79.86 E-value=3.9 Score=35.29 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.||+|||-+| |..|..-++.|++.|+.|++++..
T Consensus 8 ~gk~vlVvGg-------------------G~va~rk~~~Ll~~ga~VtVvsp~ 41 (205)
T TIGR01470 8 EGRAVLVVGG-------------------GDVALRKARLLLKAGAQLRVIAEE 41 (205)
T ss_pred CCCeEEEECc-------------------CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 6789999888 778999999999999999999854
No 326
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=79.73 E-value=12 Score=35.63 Aligned_cols=54 Identities=17% Similarity=0.091 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|..+.+.++.+ +-++ .||+|+|-+. |..-|.-+|..|+++||.|+..|..
T Consensus 211 ~PCTp~avielL~~y---~i~l--~GK~vvVIGR------------------S~iVGkPLa~LL~~~~ATVTicHs~ 264 (364)
T PLN02616 211 VPCTPKGCIELLHRY---NVEI--KGKRAVVIGR------------------SNIVGMPAALLLQREDATVSIVHSR 264 (364)
T ss_pred CCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccccHHHHHHHHHCCCeEEEeCCC
Confidence 567888888766654 2346 7899999877 7778999999999999999999965
No 327
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=79.60 E-value=13 Score=34.15 Aligned_cols=66 Identities=15% Similarity=0.051 Sum_probs=49.9
Q ss_pred chhHHhhhhcCC---CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHH
Q 026403 6 NSEIESFFDSAP---PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI 82 (239)
Q Consensus 6 ~~~~~~f~~~~~---~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~ 82 (239)
..+.-++|.... .|..|..+...++.+= -++ .||+|+|-+. |..-|.-+|..|.
T Consensus 122 ~~n~g~l~~g~~~~~~PcTp~avi~ll~~~~---i~l--~Gk~vvViGr------------------S~iVGkPla~lL~ 178 (282)
T PRK14182 122 PFNVGALSIGIAGVPRPCTPAGVMRMLDEAR---VDP--KGKRALVVGR------------------SNIVGKPMAMMLL 178 (282)
T ss_pred HhHHHHHhCCCCCCCCCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CCcchHHHHHHHH
Confidence 344555565433 4778888887776541 246 7899999887 7778999999999
Q ss_pred HCCCeEEEEecC
Q 026403 83 KMGYAVIFLYRR 94 (239)
Q Consensus 83 ~~Ga~V~~i~~~ 94 (239)
++||.|+..|..
T Consensus 179 ~~~AtVtichs~ 190 (282)
T PRK14182 179 ERHATVTIAHSR 190 (282)
T ss_pred HCCCEEEEeCCC
Confidence 999999999964
No 328
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=79.40 E-value=12 Score=34.36 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=49.3
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-++|.... .|.+|..+...++.+- -++ .||+|+|-+. |+.-|.-+|..|+++
T Consensus 122 ~N~g~l~~~~~~~~PcTp~avi~lL~~~~---i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~~ 178 (287)
T PRK14173 122 LNVGRLWMGGEALEPCTPAGVVRLLKHYG---IPL--AGKEVVVVGR------------------SNIVGKPLAALLLRE 178 (287)
T ss_pred hhhHHHhcCCCCCCCCCHHHHHHHHHHcC---CCC--CCCEEEEECC------------------CCccHHHHHHHHHHC
Confidence 34455565443 5668888887776431 246 7899999776 788899999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 179 ~aTVtichs~ 188 (287)
T PRK14173 179 DATVTLAHSK 188 (287)
T ss_pred CCEEEEeCCC
Confidence 9999999965
No 329
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=79.03 E-value=25 Score=31.75 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=29.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||++||++= .+|+| .++.||+.+.+.||+..|-+-..
T Consensus 5 ~GK~~lI~Gv-------------an~rS---IAwGIAk~l~~~GAeL~fTy~~e 42 (259)
T COG0623 5 EGKRILIMGV-------------ANNRS---IAWGIAKALAEQGAELAFTYQGE 42 (259)
T ss_pred CCceEEEEEe-------------ccccc---HHHHHHHHHHHcCCEEEEEeccH
Confidence 6799999864 22333 37889999999999999988543
No 330
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=78.93 E-value=5 Score=33.65 Aligned_cols=55 Identities=16% Similarity=0.064 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|..+..+.+.++.+- -++ .||+|+|-+. |+.-|.-+|..|.++|+.|+..|...
T Consensus 16 ~PcTp~aii~lL~~~~---~~l--~Gk~v~VvGr------------------s~~VG~Pla~lL~~~~atVt~~h~~T 70 (160)
T PF02882_consen 16 VPCTPLAIIELLEYYG---IDL--EGKKVVVVGR------------------SNIVGKPLAMLLLNKGATVTICHSKT 70 (160)
T ss_dssp --HHHHHHHHHHHHTT----ST--TT-EEEEE-T------------------TTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred cCCCHHHHHHHHHhcC---CCC--CCCEEEEECC------------------cCCCChHHHHHHHhCCCeEEeccCCC
Confidence 3446777776665422 246 7899999988 77889999999999999999999653
No 331
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=78.60 E-value=3 Score=37.66 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=27.3
Q ss_pred CeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 61 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++-|.-.=.|.||..||..|+++|+.|+++-..
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhCCCEEEEEECC
Confidence 3333444447999999999999999999999865
No 332
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=78.41 E-value=3 Score=34.20 Aligned_cols=25 Identities=36% Similarity=0.529 Sum_probs=22.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..|+++|++|+...+.
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~~ 33 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDRS 33 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEESS
T ss_pred hHHHHHHHHHHHHhcCCeEEeeccc
Confidence 6999999999999999999987754
No 333
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=78.26 E-value=15 Score=33.76 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=49.4
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-+.|.... .|.+|..+...++.+- -++ .||+|+|-+. |+.-|.-+|..|+++
T Consensus 125 ~n~g~l~~~~~~~~PcTp~av~~lL~~~~---i~l--~Gk~vvViGr------------------S~iVG~Pla~lL~~~ 181 (284)
T PRK14190 125 INVGRMMLGQDTFLPCTPHGILELLKEYN---IDI--SGKHVVVVGR------------------SNIVGKPVGQLLLNE 181 (284)
T ss_pred hhHHHHhcCCCCCCCCCHHHHHHHHHHcC---CCC--CCCEEEEECC------------------CCccHHHHHHHHHHC
Confidence 34445555543 5678888887776541 246 7899999887 888899999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 182 ~atVt~chs~ 191 (284)
T PRK14190 182 NATVTYCHSK 191 (284)
T ss_pred CCEEEEEeCC
Confidence 9999999853
No 334
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.76 E-value=13 Score=33.94 Aligned_cols=64 Identities=17% Similarity=0.174 Sum_probs=49.0
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG 85 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G 85 (239)
+.-+.|.... .|.+|..+...++.. +-++ .||+|+|.+. |...|..+|..+..+|
T Consensus 120 n~g~l~~~~~~~~PcTp~av~~ll~~~---~i~l--~Gk~V~ViGr------------------s~~vGrpla~lL~~~~ 176 (279)
T PRK14178 120 NLGRLVSGLPGFAPCTPNGIMTLLHEY---KISI--AGKRAVVVGR------------------SIDVGRPMAALLLNAD 176 (279)
T ss_pred hHHHHhCCCCCCCCCCHHHHHHHHHHc---CCCC--CCCEEEEECC------------------CccccHHHHHHHHhCC
Confidence 3444555433 567888888777654 1246 7899999987 7778999999999999
Q ss_pred CeEEEEecC
Q 026403 86 YAVIFLYRR 94 (239)
Q Consensus 86 a~V~~i~~~ 94 (239)
+.|+..|+.
T Consensus 177 atVtv~hs~ 185 (279)
T PRK14178 177 ATVTICHSK 185 (279)
T ss_pred CeeEEEecC
Confidence 999999964
No 335
>PRK06444 prephenate dehydrogenase; Provisional
Probab=77.74 E-value=3.4 Score=35.73 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=19.2
Q ss_pred ccHHHHHHHHHHHHCCCeEE
Q 026403 70 SGHRGAASTEHLIKMGYAVI 89 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~ 89 (239)
+|+||..+|+.|.+.|+.|+
T Consensus 9 ~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 9 NGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CCcHHHHHHHHHHhCCCEEE
Confidence 89999999999999999986
No 336
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.41 E-value=16 Score=33.53 Aligned_cols=54 Identities=19% Similarity=0.107 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.+|..+...++.+- -++ .||+|+|-+. |..-|.-+|..|.++||.|+..|..
T Consensus 138 ~PcTp~aii~lL~~y~---i~l--~Gk~vvViGr------------------S~~VGkPla~lL~~~~ATVt~chs~ 191 (282)
T PRK14180 138 ESCTPKGIMTMLREYG---IKT--EGAYAVVVGA------------------SNVVGKPVSQLLLNAKATVTTCHRF 191 (282)
T ss_pred CCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEEcCC
Confidence 5678999888776542 246 7899999888 7778999999999999999999965
No 337
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.14 E-value=13 Score=33.94 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=49.3
Q ss_pred hhHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC
Q 026403 7 SEIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM 84 (239)
Q Consensus 7 ~~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~ 84 (239)
.+.-++|.+.. .|..|..+...++.+= -++ .||+|+|-+. |+.-|.-+|.-|..+
T Consensus 125 ~n~g~l~~g~~~~~PcTp~av~~lL~~~~---i~l--~Gk~vvViGr------------------S~~VGkPla~lL~~~ 181 (278)
T PRK14172 125 ISVGKFYKGEKCFLPCTPNSVITLIKSLN---IDI--EGKEVVVIGR------------------SNIVGKPVAQLLLNE 181 (278)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CccchHHHHHHHHHC
Confidence 34455555433 5668888887766531 246 7899999887 778899999999999
Q ss_pred CCeEEEEecC
Q 026403 85 GYAVIFLYRR 94 (239)
Q Consensus 85 Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 182 ~AtVt~chs~ 191 (278)
T PRK14172 182 NATVTICHSK 191 (278)
T ss_pred CCEEEEeCCC
Confidence 9999999964
No 338
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.02 E-value=12 Score=34.22 Aligned_cols=52 Identities=21% Similarity=0.163 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 19 ~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+..+.-+...++.+ .-++ .||+|+|-+- +|.-|..+|..|+.+|+.|++.|+
T Consensus 140 p~T~~gii~~L~~~---~i~l--~Gk~vvViG~------------------gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 140 SATPAGIMRLLKAY---NIEL--AGKHAVVVGR------------------SAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCcHHHHHHHHHHc---CCCC--CCCEEEEECC------------------cHHHHHHHHHHHHhCCCEEEEEeC
Confidence 45566666555432 1245 7789888765 787899999999999999999997
No 339
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=76.82 E-value=5.7 Score=35.62 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=21.9
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMG-YAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~~~ 94 (239)
+|..|.+++.++..+| .+|+++.|.
T Consensus 131 aGg~a~ai~~aL~~~g~~~V~v~~R~ 156 (278)
T PRK00258 131 AGGAARAVILPLLDLGVAEITIVNRT 156 (278)
T ss_pred CcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5889999999999999 688888764
No 340
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=76.51 E-value=16 Score=33.67 Aligned_cols=64 Identities=13% Similarity=0.031 Sum_probs=48.2
Q ss_pred hHHhhhhcC----CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH
Q 026403 8 EIESFFDSA----PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK 83 (239)
Q Consensus 8 ~~~~f~~~~----~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~ 83 (239)
+.-+.|... -.|.+|..+.+.+..+ +-++ .||+|+|-+. |..-|.-+|..|++
T Consensus 126 n~g~l~~g~~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~ 182 (294)
T PRK14187 126 NVGRLFTGQKKNCLIPCTPKGCLYLIKTI---TRNL--SGSDAVVIGR------------------SNIVGKPMACLLLG 182 (294)
T ss_pred hHHHHhCCCCCCCccCcCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccchHHHHHHHhh
Confidence 444455443 2466888888766553 1246 7899999887 78889999999999
Q ss_pred CCCeEEEEecC
Q 026403 84 MGYAVIFLYRR 94 (239)
Q Consensus 84 ~Ga~V~~i~~~ 94 (239)
+||.|+..|..
T Consensus 183 ~~aTVt~chs~ 193 (294)
T PRK14187 183 ENCTVTTVHSA 193 (294)
T ss_pred CCCEEEEeCCC
Confidence 99999999975
No 341
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=76.42 E-value=4 Score=29.91 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=22.0
Q ss_pred ccHHHHHHHHHHHHCC---CeEEEEec
Q 026403 70 SGHRGAASTEHLIKMG---YAVIFLYR 93 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G---a~V~~i~~ 93 (239)
+|.||.+|++.+++.| .+|++++.
T Consensus 7 ~G~mg~al~~~l~~~g~~~~~v~~~~~ 33 (96)
T PF03807_consen 7 AGNMGSALARGLLASGIKPHEVIIVSS 33 (96)
T ss_dssp TSHHHHHHHHHHHHTTS-GGEEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCCceeEEeecc
Confidence 8999999999999999 99998843
No 342
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=76.21 E-value=4.3 Score=38.44 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=31.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC--CeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~~~~ 95 (239)
.+..+|||+| +|..|..+++.|+++| .+|..+.-..
T Consensus 3 ~~~~vlVtGG------------------~GflG~hlv~~L~~~~~~~~irv~D~~~ 40 (361)
T KOG1430|consen 3 KKLSVLVTGG------------------SGFLGQHLVQALLENELKLEIRVVDKTP 40 (361)
T ss_pred cCCEEEEECC------------------ccHHHHHHHHHHHhcccccEEEEeccCc
Confidence 4689999999 9999999999999999 8888888543
No 343
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=75.97 E-value=4.2 Score=36.33 Aligned_cols=38 Identities=26% Similarity=0.276 Sum_probs=28.8
Q ss_pred eEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 45 ~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+|+|++|||--.+- ....+|++|.++|++|++++++..
T Consensus 1 ~~~~~~~~~gG~~~--------------~~~~la~~l~~~G~ev~v~~~~~~ 38 (350)
T cd03785 1 RILIAGGGTGGHIF--------------PALALAEELRERGAEVLFLGTKRG 38 (350)
T ss_pred CEEEEecCchhhhh--------------HHHHHHHHHHhCCCEEEEEECCCc
Confidence 37888886644333 456899999999999999987654
No 344
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=75.30 E-value=19 Score=33.32 Aligned_cols=54 Identities=17% Similarity=0.047 Sum_probs=44.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.+|..+.+.+..+ +-++ .||+|+|-+- |..-|.-+|..|+++||.|+..|..
T Consensus 147 ~PcTp~avi~lL~~~---~i~l--~Gk~vvVIGR------------------S~iVGkPla~lL~~~~ATVtvchs~ 200 (299)
T PLN02516 147 LPCTPKGCLELLSRS---GIPI--KGKKAVVVGR------------------SNIVGLPVSLLLLKADATVTVVHSR 200 (299)
T ss_pred CCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 577898888777644 2356 7899999877 7778999999999999999999975
No 345
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.95 E-value=18 Score=33.27 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+++||.|+..|..
T Consensus 139 ~PcTp~av~~lL~~y---~i~l--~GK~vvViGr------------------S~iVGkPla~lL~~~~ATVtichs~ 192 (288)
T PRK14171 139 IPCTALGCLAVIKKY---EPNL--TGKNVVIIGR------------------SNIVGKPLSALLLKENCSVTICHSK 192 (288)
T ss_pred cCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 566888888776654 2356 7899999887 7778999999999999999999965
No 346
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=74.82 E-value=3.1 Score=33.99 Aligned_cols=27 Identities=26% Similarity=0.292 Sum_probs=24.6
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
-.|.+|.++|..+..+|++|++..++.
T Consensus 6 GaG~~G~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 6 GAGNWGTALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp SSSHHHHHHHHHHHHCTEEEEEETSCH
T ss_pred CcCHHHHHHHHHHHHcCCEEEEEeccH
Confidence 378999999999999999999999863
No 347
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=74.77 E-value=4.9 Score=36.12 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=29.0
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
++|||++| ||- |..+|+.+.++|+.|+...+..
T Consensus 1 m~ILvlGG------------------T~e-gr~la~~L~~~g~~v~~s~~t~ 33 (256)
T TIGR00715 1 MTVLLMGG------------------TVD-SRAIAKGLIAQGIEILVTVTTS 33 (256)
T ss_pred CeEEEEec------------------hHH-HHHHHHHHHhCCCeEEEEEccC
Confidence 47999999 887 9999999999999998887664
No 348
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase. Class I lysyl tRNA synthetase (LysRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. The class I LysRS is found only in archaea and some bacteria and has evolved separately from class II LysRS, as the two do not share structural or sequence similarity.
Probab=74.62 E-value=11 Score=35.50 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=46.3
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPY 100 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~ 100 (239)
+.+++||+|-| +|..=.|-|+-+-.++-.+|+++..+|++|.|+++.....|+
T Consensus 18 ~~~~~v~tgi~-----psG~~HIG~~~e~i~~D~i~R~lr~~G~~v~~v~~~Dd~d~l 70 (353)
T cd00674 18 KEKYVVASGIS-----PSGHIHIGNFREVITADLVARALRDLGFEVRLIYSWDDYDRL 70 (353)
T ss_pred CCeEEEecCCC-----CCCCcccCccHHHHHHHHHHHHHHHcCCCEEEEEEEcCCCcc
Confidence 35799999975 357889999999999999999999999999999998877553
No 349
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=74.49 E-value=6 Score=35.80 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHHHCCCe-EEEEecC
Q 026403 71 GHRGAASTEHLIKMGYA-VIFLYRR 94 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~-V~~i~~~ 94 (239)
|..|.++|.+|++.|+. |+++.|.
T Consensus 135 GGagrAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 135 GGAATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred cHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45799999999999997 8887764
No 350
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=74.35 E-value=7.2 Score=34.43 Aligned_cols=54 Identities=22% Similarity=0.188 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 22 RAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 22 ~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.|+|......|+.+..--++.=..|+=|||...+||| +|++....||.||.+..
T Consensus 86 lErieg~~~~~l~~~~i~~~DVliviSnSGrNpvpie------------------~A~~~rekGa~vI~vTS 139 (243)
T COG4821 86 LERIEGYAKLFLHRLQIRPNDVLIVISNSGRNPVPIE------------------VAEYAREKGAKVIAVTS 139 (243)
T ss_pred hHhhhhHHHHHHHHhcCCCCCEEEEEeCCCCCCcchH------------------HHHHHHhcCCeEEEEeh
Confidence 5778888888888643221111355568999999998 68999999999999985
No 351
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.32 E-value=19 Score=32.97 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.+|..+...++.+ +-++ .||+|+|-+. |+.-|.-+|.-+.++|+.|+..|..
T Consensus 138 ~PcTp~aii~lL~~~---~i~l--~Gk~vvViGr------------------s~iVGkPla~lL~~~~atVt~~hs~ 191 (285)
T PRK14189 138 RPCTPYGVMKMLESI---GIPL--RGAHAVVIGR------------------SNIVGKPMAMLLLQAGATVTICHSK 191 (285)
T ss_pred cCCCHHHHHHHHHHc---CCCC--CCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEecCC
Confidence 566788888766543 1246 7899999887 7778999999999999999999864
No 352
>PRK07334 threonine dehydratase; Provisional
Probab=74.01 E-value=39 Score=31.97 Aligned_cols=28 Identities=18% Similarity=0.315 Sum_probs=24.9
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|||-+|.++|-++...|+.++++....
T Consensus 77 aSsGN~g~alA~~a~~~G~~~~iv~p~~ 104 (403)
T PRK07334 77 MSAGNHAQGVAYHAQRLGIPATIVMPRF 104 (403)
T ss_pred ECCcHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4799999999999999999999988543
No 353
>PLN02970 serine racemase
Probab=73.69 E-value=24 Score=32.41 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=25.3
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|||-+|.++|-++..+|+.++++..+.
T Consensus 81 aSsGN~g~alA~~a~~~G~~~~ivvp~~ 108 (328)
T PLN02970 81 HSSGNHAAALALAAKLRGIPAYIVVPKN 108 (328)
T ss_pred ECCcHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4899999999999999999999998654
No 354
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=73.21 E-value=22 Score=32.62 Aligned_cols=64 Identities=11% Similarity=0.057 Sum_probs=48.4
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH--
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK-- 83 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~-- 83 (239)
+.-++|.... .|.+|..+...++.+ +-++ .||+|+|-+. |+.-|.-+|..|++
T Consensus 126 n~g~l~~~~~~~~PcTp~av~~ll~~~---~i~l--~Gk~vvViGr------------------S~~VGkPla~lL~~~~ 182 (284)
T PRK14193 126 NLGRLVLNEPAPLPCTPRGIVHLLRRY---DVEL--AGAHVVVIGR------------------GVTVGRPIGLLLTRRS 182 (284)
T ss_pred hhhHHhCCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcchHHHHHHHhhcc
Confidence 3444554433 567888888777644 2246 7899999877 88889999999998
Q ss_pred CCCeEEEEecC
Q 026403 84 MGYAVIFLYRR 94 (239)
Q Consensus 84 ~Ga~V~~i~~~ 94 (239)
+||.|+..|..
T Consensus 183 ~~atVtvchs~ 193 (284)
T PRK14193 183 ENATVTLCHTG 193 (284)
T ss_pred CCCEEEEeCCC
Confidence 89999999965
No 355
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=72.59 E-value=4.7 Score=37.39 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=26.4
Q ss_pred eeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 62 VRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 62 VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|-|.=.-.|.||..||..|+.+|+.|++.-..
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~ 39 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPA 39 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 343443448999999999999999999998753
No 356
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=72.42 E-value=5.7 Score=37.35 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..|.++|+.|+.+.+.
T Consensus 107 ~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 107 KGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred CChhhHHHHHHHHHCCCeEEEeCCC
Confidence 8999999999999999999988864
No 357
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=71.81 E-value=17 Score=33.39 Aligned_cols=28 Identities=32% Similarity=0.411 Sum_probs=22.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCe
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA 87 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~ 87 (239)
.+|.+|||+- +||. |.+||.-++.-.-+
T Consensus 2 ~RKvalITGa-----------------nSgl-Gl~i~~RLl~~~De 29 (341)
T KOG1478|consen 2 MRKVALITGA-----------------NSGL-GLAICKRLLAEDDE 29 (341)
T ss_pred CceEEEEecC-----------------CCcc-cHHHHHHHHhccCC
Confidence 3688888876 7885 99999999986554
No 358
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=71.15 E-value=15 Score=36.33 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=28.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+|||+++ |-.|.++|.+|.++|++|+++.|.
T Consensus 378 ~~k~vlIlGa-------------------GGagrAia~~L~~~G~~V~i~nR~ 411 (529)
T PLN02520 378 AGKLFVVIGA-------------------GGAGKALAYGAKEKGARVVIANRT 411 (529)
T ss_pred CCCEEEEECC-------------------cHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5689999876 457999999999999998877653
No 359
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=71.11 E-value=4.8 Score=36.52 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+++.+.
T Consensus 10 ~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 10 AGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred ccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 7999999999999999999999865
No 360
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=70.58 E-value=9.8 Score=34.55 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=29.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|++|+|.+. |.+|.++|+.|...|++|++..|.
T Consensus 150 ~gk~v~IiG~-------------------G~iG~avA~~L~~~G~~V~v~~R~ 183 (287)
T TIGR02853 150 HGSNVMVLGF-------------------GRTGMTIARTFSALGARVFVGARS 183 (287)
T ss_pred CCCEEEEEcC-------------------hHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6788888764 889999999999999999988764
No 361
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete. This model represents the lysyl-tRNA synthetases that are class I amino-acyl tRNA synthetases. It includes archaeal and spirochete examples of the enzyme. All other known examples are class IIc amino-acyl tRNA synthetases and seem to form a separate orthologous set.
Probab=69.98 E-value=12 Score=36.99 Aligned_cols=53 Identities=25% Similarity=0.236 Sum_probs=46.9
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYC 101 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~~ 101 (239)
..++||+|=+ +|..-.|.|+-.=.++-.+++++..+|.+|.+|++.....|+.
T Consensus 18 ~~~~~~tg~~-----psG~~HiG~~~e~~~~d~v~r~~r~~g~~~~~i~~~Dd~D~lR 70 (515)
T TIGR00467 18 NLYTVASGIT-----PSGHIHIGNFREVITADAIARALRDSGSEARFIYIADNYDPLR 70 (515)
T ss_pred CeEEEecCCC-----CCCCccccchhhhhHHHHHHHHHHHcCCCEEEEEEEcCCcccc
Confidence 5799999955 6789999999988999999999999999999999998876653
No 362
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=69.85 E-value=35 Score=29.70 Aligned_cols=59 Identities=15% Similarity=0.010 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHh------cCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 026403 18 PLNDRAAISQKLKEFIA------LNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~------~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (239)
.|..|..+.+.++.+=- .+.++ .||+|+|-+. |..-|.-+|..|+++||.|+..
T Consensus 33 ~PCTp~avi~lL~~~~i~~~~~~~~~~l--~GK~vvVIGr------------------S~iVGkPla~lL~~~~AtVti~ 92 (197)
T cd01079 33 LPCTPLAIVKILEFLGIYNKILPYGNRL--YGKTITIINR------------------SEVVGRPLAALLANDGARVYSV 92 (197)
T ss_pred cCCCHHHHHHHHHHhCCcccccccCCCC--CCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEE
Confidence 46789999888875411 01246 7899999887 7778999999999999999999
Q ss_pred ecCCC
Q 026403 92 YRRGT 96 (239)
Q Consensus 92 ~~~~s 96 (239)
|.++.
T Consensus 93 ~~~~~ 97 (197)
T cd01079 93 DINGI 97 (197)
T ss_pred ecCcc
Confidence 86554
No 363
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=69.47 E-value=5.5 Score=35.02 Aligned_cols=27 Identities=37% Similarity=0.458 Sum_probs=24.2
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
-+|.+|.++|..|.+.|++|++-.+..
T Consensus 8 GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 8 GTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred ccChHHHHHHHHHHhCCCeEEEecCCC
Confidence 389999999999999999999997653
No 364
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=69.24 E-value=8.4 Score=34.85 Aligned_cols=22 Identities=32% Similarity=0.398 Sum_probs=19.3
Q ss_pred HHHHHHHHHCCCeEEEEecCCC
Q 026403 75 AASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 75 ~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..+|+++.++|++|.++.++.+
T Consensus 19 ~~la~~L~~~g~ev~vv~~~~~ 40 (357)
T PRK00726 19 LALAEELKKRGWEVLYLGTARG 40 (357)
T ss_pred HHHHHHHHhCCCEEEEEECCCc
Confidence 4799999999999999998664
No 365
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=68.44 E-value=16 Score=35.06 Aligned_cols=56 Identities=20% Similarity=0.242 Sum_probs=41.4
Q ss_pred ceEEEecCCcccccC---CCCeeeeecC---------------CccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 44 RVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 44 k~vlITsGgT~epID---~~~VR~ItN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
++++|-.|.+.-+++ ...++++++. -.|-.|..+|..|.+.|.+|+++.+...+.|
T Consensus 138 d~lVIATGs~p~~ipg~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~ 211 (466)
T PRK06115 138 KDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICP 211 (466)
T ss_pred CEEEEeCCCCCCCCCCCCCCCCeEECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCC
Confidence 478888887654443 1256777653 4788899999999999999999997655544
No 366
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=68.25 E-value=37 Score=26.46 Aligned_cols=71 Identities=18% Similarity=0.242 Sum_probs=41.7
Q ss_pred HHHHHHHHHH-HCCCeEEEEecCCCCCCccCCCCCcchhhhhhcccCCceEEeCcchHHHHHHHHHHHHhhhcccccccc
Q 026403 73 RGAASTEHLI-KMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLP 151 (239)
Q Consensus 73 ~G~~iAe~~~-~~Ga~V~~i~~~~s~~P~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~av~~~~~~~~~~~ll~~~ 151 (239)
.|..++..++ ..||+|+++-... | .+++.+++.+ .+-.+..++
T Consensus 14 lG~~~~~~~l~~~G~~vi~lG~~v---------p----------------------~e~~~~~a~~-----~~~d~V~iS 57 (122)
T cd02071 14 RGAKVIARALRDAGFEVIYTGLRQ---------T----------------------PEEIVEAAIQ-----EDVDVIGLS 57 (122)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCC---------C----------------------HHHHHHHHHH-----cCCCEEEEc
Confidence 3555555544 6999999987542 2 1234333332 345666776
Q ss_pred cccHHHHHHHHHHHHHHhhhcCCcceeeh
Q 026403 152 FTTIFEYLQMLQMIAVSSRSLGPCSMFYL 180 (239)
Q Consensus 152 f~t~~dy~~~l~~i~~~l~~~~~~d~~i~ 180 (239)
+.. ..|...++.+++.|+..+..++.++
T Consensus 58 ~~~-~~~~~~~~~~~~~L~~~~~~~i~i~ 85 (122)
T cd02071 58 SLS-GGHMTLFPEVIELLRELGAGDILVV 85 (122)
T ss_pred ccc-hhhHHHHHHHHHHHHhcCCCCCEEE
Confidence 664 4677777777777766544344433
No 367
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.
Probab=68.16 E-value=9.5 Score=36.28 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=22.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+..+|.++||||..+|++|.++.-.
T Consensus 238 s~yta~tiAEYfrd~G~dVll~~Ds 262 (369)
T cd01134 238 SIYTGITIAEYFRDMGYNVALMADS 262 (369)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5778999999999999999999843
No 368
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=66.85 E-value=7.5 Score=35.25 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=23.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+|.||.++|..+..+|++|+++.++.
T Consensus 12 ~G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 12 AGAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 79999999999999999999888764
No 369
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=66.59 E-value=14 Score=29.20 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=20.1
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMG-YAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~~~ 94 (239)
.|.+|.++|+.+.+.| +.|+++.+.
T Consensus 27 ~G~~g~~~a~~l~~~g~~~v~v~~r~ 52 (155)
T cd01065 27 AGGAARAVAYALAELGAAKIVIVNRT 52 (155)
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4789999999999996 677777653
No 370
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed
Probab=66.51 E-value=20 Score=35.43 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=45.6
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPY 100 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P~ 100 (239)
..++|++|-| +|..=.|.|+-.-.++-.+++++..+|.+|.+|++.....|+
T Consensus 23 ~~~~~~~g~~-----psG~~HiG~~~e~~~~d~v~r~lr~~G~~v~~i~~~Dd~d~l 74 (510)
T PRK00750 23 PPVVVETGIG-----PSGLPHIGNFREVARTDMVRRALRDLGIKTRLIFFSDDMDGL 74 (510)
T ss_pred CcEEEEeCCC-----CCCCcccccccchhhHHHHHHHHHHcCCcEEEEEEEecCCcc
Confidence 3599999975 568889999999999999999999999999999998776554
No 371
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=66.50 E-value=40 Score=30.09 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=24.8
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|||-+|.++|.++...|..++++....
T Consensus 71 ~ssGN~g~alA~~a~~~G~~~~ivvp~~ 98 (304)
T cd01562 71 ASAGNHAQGVAYAAKLLGIPATIVMPET 98 (304)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3689999999999999999999988554
No 372
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=66.28 E-value=16 Score=34.17 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=29.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
.+|-|+||+. | ||. |..+|..|.++|+.|.-=+
T Consensus 28 ~~k~VlITGC------D-----------SGf-G~~LA~~L~~~Gf~V~Agc 60 (322)
T KOG1610|consen 28 SDKAVLITGC------D-----------SGF-GRLLAKKLDKKGFRVFAGC 60 (322)
T ss_pred CCcEEEEecC------C-----------cHH-HHHHHHHHHhcCCEEEEEe
Confidence 6699999999 5 885 9999999999999887655
No 373
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=66.20 E-value=6.8 Score=34.24 Aligned_cols=27 Identities=22% Similarity=0.388 Sum_probs=24.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
-|+.|..+|+.|.++|++|++|.....
T Consensus 8 ~G~vG~~va~~L~~~g~~Vv~Id~d~~ 34 (225)
T COG0569 8 AGRVGRSVARELSEEGHNVVLIDRDEE 34 (225)
T ss_pred CcHHHHHHHHHHHhCCCceEEEEcCHH
Confidence 489999999999999999999998754
No 374
>PRK08655 prephenate dehydrogenase; Provisional
Probab=66.15 E-value=11 Score=36.33 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|.||.++|..|..+|++|+++.+.
T Consensus 9 ~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 9 TGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999988764
No 375
>PRK06382 threonine dehydratase; Provisional
Probab=66.06 E-value=63 Score=30.67 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=25.0
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+|-.|.++|-++...|..++++....
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~ 106 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEY 106 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5799999999999999999999998554
No 376
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=66.00 E-value=37 Score=31.35 Aligned_cols=64 Identities=14% Similarity=0.084 Sum_probs=47.5
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM- 84 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~- 84 (239)
+.-+.|.... .|..|..+...++.+ +-++ .||+|+|-+. |..-|.-+|..|+++
T Consensus 125 n~g~l~~g~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~~~~ 181 (297)
T PRK14167 125 NVGRLVAGDARFKPCTPHGIQKLLAAA---GVDT--EGADVVVVGR------------------SDIVGKPMANLLIQKA 181 (297)
T ss_pred hhHHHhCCCCCCCCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CcccHHHHHHHHhcCc
Confidence 3444444332 566888888777644 1246 7899999887 788899999999988
Q ss_pred ---CCeEEEEecC
Q 026403 85 ---GYAVIFLYRR 94 (239)
Q Consensus 85 ---Ga~V~~i~~~ 94 (239)
||.|+..|..
T Consensus 182 ~~~~aTVtvchs~ 194 (297)
T PRK14167 182 DGGNATVTVCHSR 194 (297)
T ss_pred cCCCCEEEEeCCC
Confidence 8999999864
No 377
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=65.93 E-value=14 Score=35.32 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+++|+|.+| |..|.++|+.|.++|++|+++.+.
T Consensus 15 ~~~~v~viG~-------------------G~~G~~~A~~L~~~G~~V~~~d~~ 48 (480)
T PRK01438 15 QGLRVVVAGL-------------------GVSGFAAADALLELGARVTVVDDG 48 (480)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5678888766 667999999999999999998754
No 378
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=65.86 E-value=7.6 Score=30.80 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|-+|..+|-.|.++|++|+++.++.
T Consensus 6 ~GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 6 AGAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred cCHHHHHHHHHHHHCCCceEEEEccc
Confidence 58899999999999999999999875
No 379
>PRK07048 serine/threonine dehydratase; Validated
Probab=65.75 E-value=39 Score=30.76 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=25.1
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|||-.|.++|-++...|+.++++....
T Consensus 78 aSsGN~g~alA~~a~~~G~~~~vvvp~~ 105 (321)
T PRK07048 78 FSSGNHAQAIALSARLLGIPATIVMPQD 105 (321)
T ss_pred eCCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4799999999999999999999998654
No 380
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=65.52 E-value=7.4 Score=34.90 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..||..|+.+|++|+++..+
T Consensus 12 ~G~mG~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 12 AGQMGSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6999999999999999999988754
No 381
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=65.42 E-value=12 Score=34.69 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|..|.++|.++.++|++|+++-+.
T Consensus 9 Gi~Gls~A~~l~~~g~~V~vle~~ 32 (416)
T PRK00711 9 GVIGVTSAWYLAQAGHEVTVIDRQ 32 (416)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 789999999999999999999875
No 382
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional
Probab=65.23 E-value=29 Score=33.13 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=33.8
Q ss_pred ccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 56 PLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 56 pID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
||+ .||.|+ +|+..-|...+.-|...||+||=|-.+.
T Consensus 11 pL~--GirVld-ls~~~aGP~a~~lLAdlGAeVIKVE~p~ 47 (405)
T PRK03525 11 PLA--GLRVVF-SGIEIAGPFAGQMFAEWGAEVIWIENVA 47 (405)
T ss_pred CCC--CCEEEE-ecchhHHHHHHHHHHHcCCcEEEECCCC
Confidence 899 999997 8899999999999999999999999663
No 383
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=65.16 E-value=7.7 Score=35.33 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||.++|..++++|++|+++.+.
T Consensus 12 ~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 12 AGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7999999999999999999999885
No 384
>cd01132 F1_ATPase_alpha F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.
Probab=65.15 E-value=18 Score=33.05 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=31.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+.++|.+-...-|.. |+ -+..+|.++||+|..+|.+|.++.-.
T Consensus 127 ~tvvv~~t~d~~~~~----r~----~a~~~a~aiAE~fr~~G~~Vlvl~Ds 169 (274)
T cd01132 127 YTIVVAATASDPAPL----QY----LAPYTGCAMGEYFMDNGKHALIIYDD 169 (274)
T ss_pred eeEEEEeCCCCchhH----HH----HHHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 567777665554544 22 24668999999999999999999954
No 385
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=64.90 E-value=31 Score=25.96 Aligned_cols=24 Identities=25% Similarity=0.223 Sum_probs=18.8
Q ss_pred ccHHHHHHHHHHHHCCCe-EEEEec
Q 026403 70 SGHRGAASTEHLIKMGYA-VIFLYR 93 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~-V~~i~~ 93 (239)
+|.+....+..|...|+. |..+.|
T Consensus 87 ~g~~s~~~~~~l~~~G~~~v~~l~G 111 (118)
T cd01449 87 SGVTACVLLLALELLGYKNVRLYDG 111 (118)
T ss_pred cHHHHHHHHHHHHHcCCCCeeeeCC
Confidence 477888888999999994 766654
No 386
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=64.89 E-value=7.6 Score=34.75 Aligned_cols=25 Identities=12% Similarity=0.201 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+++...
T Consensus 9 ~G~mG~~iA~~la~~G~~V~~~d~~ 33 (288)
T PRK09260 9 AGVMGRGIAYVFAVSGFQTTLVDIK 33 (288)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEeCC
Confidence 6999999999999999999998754
No 387
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=64.86 E-value=7.3 Score=38.31 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..||..|+++|+.|+++.+.
T Consensus 13 aG~MG~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 13 AGAMGAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 7999999999999999999998765
No 388
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=64.66 E-value=9.6 Score=36.96 Aligned_cols=58 Identities=19% Similarity=0.328 Sum_probs=40.2
Q ss_pred HHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 29 LKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 29 v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|.+|+....--.+-+|.|+|-|=.-.-|+. -++ -+.++-+|||||..+|.+|.|+.-.
T Consensus 204 VrEFIE~~Lg~egl~rsViVvATSD~s~l~--R~~------aa~~At~IAEyFRDqG~~VLL~mDS 261 (441)
T COG1157 204 VREFIEKDLGEEGLKRSVVVVATSDESALM--RLK------AAFTATTIAEYFRDQGKRVLLIMDS 261 (441)
T ss_pred HHHHHHHhcchhhccceEEEEECCCCCHHH--HHH------HHHHHHHHHHHHHhCCCeEEEEeec
Confidence 455665321111245788887777777777 222 5778899999999999999999843
No 389
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=64.66 E-value=11 Score=33.98 Aligned_cols=41 Identities=20% Similarity=0.266 Sum_probs=34.1
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+.|++++.+|...|.-. |=+.|.++++++.+.||+|+++.-
T Consensus 3 ~~~i~vl~gg~s~e~~v-----------sl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 3 NEKIVVLYGGDSPEREV-----------SLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CcEEEEEeCCCCCchHh-----------HHHHHHHHHHHHHHcCCEEEEEcC
Confidence 34778888888888777 667899999999999999998853
No 390
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=64.45 E-value=14 Score=32.78 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=21.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|.+|.++|..++..|+.|+++.|.
T Consensus 125 aGg~g~aia~~L~~~g~~v~v~~R~ 149 (270)
T TIGR00507 125 AGGAARAVALPLLKADCNVIIANRT 149 (270)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4779999999999999988888753
No 391
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=64.28 E-value=5.5 Score=35.97 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=29.8
Q ss_pred CeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 61 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+++-++=+-.|.||+-||..++..|+.|+++-++..
T Consensus 10 ~~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~~ 45 (298)
T KOG2304|consen 10 EIKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANED 45 (298)
T ss_pred cccceEEEcccccchhHHHHHHhcCCceEEecCCHH
Confidence 455555556899999999999999999999987644
No 392
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=64.14 E-value=13 Score=30.63 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|.-|..+|..+++.|..|++++|.
T Consensus 175 ~G~SA~d~a~~l~~~g~~V~~~~R~ 199 (203)
T PF13738_consen 175 GGNSAVDIAYALAKAGKSVTLVTRS 199 (203)
T ss_dssp -SHHHHHHHHHHTTTCSEEEEEESS
T ss_pred ChHHHHHHHHHHHhhCCEEEEEecC
Confidence 5888999999999999999999986
No 393
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.12 E-value=45 Score=30.78 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=48.3
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM- 84 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~- 84 (239)
+.-+.|...+ .|.+|..+...++.+- -++ .||+|+|-+. |..-|.-+|..|+++
T Consensus 125 N~g~l~~~~~~~~PcTp~av~~lL~~~~---i~l--~GK~vvViGr------------------S~iVGkPla~lL~~~~ 181 (293)
T PRK14185 125 NVGRMSIGLPCFVSATPNGILELLKRYH---IET--SGKKCVVLGR------------------SNIVGKPMAQLMMQKA 181 (293)
T ss_pred hHHHHhCCCCCCCCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CccchHHHHHHHHcCC
Confidence 3444554433 4668888887776542 246 7899999877 778899999999998
Q ss_pred ---CCeEEEEecCC
Q 026403 85 ---GYAVIFLYRRG 95 (239)
Q Consensus 85 ---Ga~V~~i~~~~ 95 (239)
||.|+..|...
T Consensus 182 ~~~~aTVtvchs~T 195 (293)
T PRK14185 182 YPGDCTVTVCHSRS 195 (293)
T ss_pred CCCCCEEEEecCCC
Confidence 69999999653
No 394
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=64.05 E-value=11 Score=35.58 Aligned_cols=37 Identities=32% Similarity=0.350 Sum_probs=30.8
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCe-EEEEecC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRR 94 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~~~ 94 (239)
|++++|+|||--.+= -+.++|++|.++|++ |.++-..
T Consensus 1 ~~ivl~~gGTGGHv~--------------pAlAl~~~l~~~g~~~v~~~~~~ 38 (357)
T COG0707 1 KKIVLTAGGTGGHVF--------------PALALAEELAKRGWEQVIVLGTG 38 (357)
T ss_pred CeEEEEeCCCccchh--------------HHHHHHHHHHhhCccEEEEeccc
Confidence 578999999988888 499999999999994 7666433
No 395
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.90 E-value=41 Score=31.06 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=48.4
Q ss_pred hhHHhhhhcC----CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHH
Q 026403 7 SEIESFFDSA----PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI 82 (239)
Q Consensus 7 ~~~~~f~~~~----~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~ 82 (239)
.+.-++|... -.|.+|..+.+.+..+ +-++ .||+|+|-+. |..-|.-+|..|+
T Consensus 126 ~n~g~l~~~~~~~~~~PcTp~avi~lL~~~---~i~l--~Gk~vvViGr------------------S~iVGkPla~lL~ 182 (297)
T PRK14168 126 VNVGRLMIGGDEVKFLPCTPAGIQEMLVRS---GVET--SGAEVVVVGR------------------SNIVGKPIANMMT 182 (297)
T ss_pred hhHHHHhcCCCCCCCcCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CCcccHHHHHHHH
Confidence 3444556553 2466888888776643 2346 7899999877 7888999999999
Q ss_pred HC----CCeEEEEecC
Q 026403 83 KM----GYAVIFLYRR 94 (239)
Q Consensus 83 ~~----Ga~V~~i~~~ 94 (239)
++ ||.|+..|..
T Consensus 183 ~~~~~~~atVtv~hs~ 198 (297)
T PRK14168 183 QKGPGANATVTIVHTR 198 (297)
T ss_pred hcccCCCCEEEEecCC
Confidence 98 7999999965
No 396
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.35 E-value=47 Score=30.53 Aligned_cols=64 Identities=17% Similarity=0.072 Sum_probs=48.2
Q ss_pred hHHhhhhcCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH--
Q 026403 8 EIESFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK-- 83 (239)
Q Consensus 8 ~~~~f~~~~~--~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~-- 83 (239)
+.-..|.... .|.+|..+...++.+- -++ .||+|+|-+. |..-|.-+|..|++
T Consensus 125 N~g~l~~~~~~~~PcTp~av~~lL~~~~---i~l--~Gk~vvViGr------------------S~iVG~Pla~lL~~~~ 181 (286)
T PRK14184 125 NMGRLALGLPGFRPCTPAGVMTLLERYG---LSP--AGKKAVVVGR------------------SNIVGKPLALMLGAPG 181 (286)
T ss_pred hHHHHhCCCCCCCCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CccchHHHHHHHhCCc
Confidence 4444454433 5678888887776541 246 7899999887 77789999999998
Q ss_pred --CCCeEEEEecC
Q 026403 84 --MGYAVIFLYRR 94 (239)
Q Consensus 84 --~Ga~V~~i~~~ 94 (239)
+||.|+..|..
T Consensus 182 ~~~~AtVt~~hs~ 194 (286)
T PRK14184 182 KFANATVTVCHSR 194 (286)
T ss_pred ccCCCEEEEEeCC
Confidence 89999999954
No 397
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=63.11 E-value=12 Score=33.77 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=23.5
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
=.|.||..+|..|++.|++|+++.+.
T Consensus 11 GaG~mG~~iA~~l~~~g~~V~~~d~~ 36 (311)
T PRK06130 11 GAGTMGSGIAALFARKGLQVVLIDVM 36 (311)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 48999999999999999999998754
No 398
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=62.88 E-value=11 Score=33.76 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=23.9
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.=.|.||..||..|+.+|++|+++..+
T Consensus 9 iGaG~mG~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 9 VGSGVMGQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred ECccHHHHHHHHHHHhcCCeEEEEeCC
Confidence 347999999999999999999998764
No 399
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=62.70 E-value=6.8 Score=36.71 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=29.5
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|+|++|||.-.|= |+++|+++.++|++|.++-..+
T Consensus 6 ~ki~i~aGgtsGhi~---------------paal~~~l~~~~~~~~~~g~gg 42 (385)
T TIGR00215 6 PTIALVAGEASGDIL---------------GAGLRQQLKEHYPNARFIGVAG 42 (385)
T ss_pred CeEEEEeCCccHHHH---------------HHHHHHHHHhcCCCcEEEEEcc
Confidence 478899998755544 7799999999999998886553
No 400
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=62.68 E-value=20 Score=28.45 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=21.0
Q ss_pred ccHHHHHHHHHHHHCCCe-EEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYA-VIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~-V~~i~~~ 94 (239)
.|.+|.+++.++..+|+. |+++.|.
T Consensus 20 aGg~ar~v~~~L~~~g~~~i~i~nRt 45 (135)
T PF01488_consen 20 AGGAARAVAAALAALGAKEITIVNRT 45 (135)
T ss_dssp SSHHHHHHHHHHHHTTSSEEEEEESS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 477999999999999998 6666653
No 401
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=62.65 E-value=9.5 Score=34.16 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++.+|++|+++-..
T Consensus 11 aG~mG~~iA~~la~~G~~V~l~d~~ 35 (287)
T PRK08293 11 AGVLGSQIAFQTAFHGFDVTIYDIS 35 (287)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 7999999999999999999999864
No 402
>PRK06815 hypothetical protein; Provisional
Probab=62.25 E-value=59 Score=29.62 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=26.7
Q ss_pred eeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 64 YIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 64 ~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+ .|||-+|.++|-++...|..++++..+.
T Consensus 71 vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~ 101 (317)
T PRK06815 71 VIT-ASSGNHGQGVALAAKLAGIPVTVYAPEQ 101 (317)
T ss_pred EEE-ECCChHHHHHHHHHHHhCCCEEEEECCC
Confidence 344 5899999999999999999999998654
No 403
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=62.07 E-value=75 Score=29.60 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=24.2
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+|-.|.++|-++...|..++.+....
T Consensus 55 SsGN~g~alA~~a~~~G~~~~iv~p~~ 81 (380)
T TIGR01127 55 SAGNHAQGVAYAAKKFGIKAVIVMPES 81 (380)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 689999999999999999999888554
No 404
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=62.01 E-value=26 Score=29.73 Aligned_cols=71 Identities=17% Similarity=0.090 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCc-c----cccCC-CCeeeeecCCccHHH----HHHHHHHHHCCCeEE
Q 026403 20 NDRAAISQKLKEFIALNSSESGTRRVACVTSGGT-T----VPLEQ-RCVRYIDNFSSGHRG----AASTEHLIKMGYAVI 89 (239)
Q Consensus 20 ~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT-~----epID~-~~VR~ItN~SSG~~G----~~iAe~~~~~Ga~V~ 89 (239)
..++.+...+.+.+.. ..++++-+|+ . ..+.. .+-||++....|.|| ++|.-.+...+..|+
T Consensus 8 l~~~~~~~~l~~~l~~--------d~iiv~d~G~~~~~~~~~~~~~~~~~~~~~~~~GsmG~~lpaaiGa~la~p~~~vv 79 (202)
T cd02006 8 IKPQRVYEEMNKAFGR--------DVRYVTTIGLSQIAGAQMLHVYKPRHWINCGQAGPLGWTVPAALGVAAADPDRQVV 79 (202)
T ss_pred cCHHHHHHHHHhhCCC--------CeEEEECCcHHHHHHHHhcCcCCCCeEEccCCccchhhhhHHHHhHHhhCCCCeEE
Confidence 4677777777666542 2455555454 2 22321 257889877789898 555555555567899
Q ss_pred EEecCCCCC
Q 026403 90 FLYRRGTCE 98 (239)
Q Consensus 90 ~i~~~~s~~ 98 (239)
.|.|.+++.
T Consensus 80 ~i~GDG~f~ 88 (202)
T cd02006 80 ALSGDYDFQ 88 (202)
T ss_pred EEEeChHhh
Confidence 999999864
No 405
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=61.54 E-value=18 Score=31.77 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=30.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+.++||++| +|..|.++++.+...|+.|+.+.+.
T Consensus 162 ~~~~vlI~ga------------------~g~vG~~~~~~a~~~g~~v~~~~~~ 196 (332)
T cd08259 162 KGDTVLVTGA------------------GGGVGIHAIQLAKALGARVIAVTRS 196 (332)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHcCCeEEEEeCC
Confidence 5688999887 7889999999999999999888754
No 406
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=61.21 E-value=29 Score=35.68 Aligned_cols=38 Identities=34% Similarity=0.309 Sum_probs=33.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..+.+|||++ |-|..|+++++-++.-|+.||.-..+.+
T Consensus 395 ~d~valVTGA-----------------~~gSIaa~Vv~~LL~gGAtVI~TTS~~s 432 (866)
T COG4982 395 GDKVALVTGA-----------------SKGSIAAAVVARLLAGGATVIATTSRLS 432 (866)
T ss_pred ccceEEEecC-----------------CCcchHHHHHHHHHhCCcEEEEEccccc
Confidence 5577888877 8999999999999999999999887654
No 407
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=61.13 E-value=18 Score=28.41 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=23.4
Q ss_pred eeeecCCccHHHHHHHHHHHH-CCCeEEEEec
Q 026403 63 RYIDNFSSGHRGAASTEHLIK-MGYAVIFLYR 93 (239)
Q Consensus 63 R~ItN~SSG~~G~~iAe~~~~-~Ga~V~~i~~ 93 (239)
|.+=+-.+|+||..+++.+.. .|.++.-...
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~ 33 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVD 33 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEe
Confidence 444445689999999999998 8888555443
No 408
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=60.62 E-value=19 Score=32.43 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=30.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|||+++ +|..|.++++.+..+|+.|+.+.+.
T Consensus 151 ~g~~VlI~Ga------------------~G~vG~~aiqlAk~~G~~Vi~~~~~ 185 (338)
T cd08295 151 KGETVFVSAA------------------SGAVGQLVGQLAKLKGCYVVGSAGS 185 (338)
T ss_pred CCCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6789999987 7888999999999999999887754
No 409
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=60.51 E-value=7.3 Score=36.08 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=23.3
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
-+|.||..||..++..|+.|++.-..
T Consensus 10 GaG~MG~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 10 GAGVMGAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred cccchhHHHHHHHhhcCCceEEEeCC
Confidence 37899999999999988999999865
No 410
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=60.50 E-value=20 Score=30.98 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=29.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|+.|+|++| +|.+|.++++.+..+|+.|+.+.+.
T Consensus 144 ~g~~vlI~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 178 (325)
T cd08253 144 AGETVLVHGG------------------SGAVGHAAVQLARWAGARVIATASS 178 (325)
T ss_pred CCCEEEEEcC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5789999987 5678999999999999999888764
No 411
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=60.41 E-value=16 Score=31.33 Aligned_cols=19 Identities=32% Similarity=0.270 Sum_probs=16.3
Q ss_pred HHHHHHHCCCeEEEEecCC
Q 026403 77 STEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 77 iAe~~~~~Ga~V~~i~~~~ 95 (239)
+|+.|+++|++|+++.++.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~ 19 (241)
T PRK12428 1 TARLLRFLGARVIGVDRRE 19 (241)
T ss_pred ChHHHHhCCCEEEEEeCCc
Confidence 5789999999999998753
No 412
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=60.32 E-value=18 Score=33.72 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=23.0
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
|..|..+|..+.++|.+|+++++...+
T Consensus 153 G~ig~E~A~~l~~~g~~Vtlv~~~~~~ 179 (396)
T PRK09754 153 GTIGLELAASATQRRCKVTVIELAATV 179 (396)
T ss_pred CHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 557999999999999999999976543
No 413
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=59.80 E-value=15 Score=32.90 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+++.+.
T Consensus 12 aG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 12 AGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7999999999999999999999865
No 414
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=59.57 E-value=13 Score=32.87 Aligned_cols=25 Identities=28% Similarity=0.410 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|.++|-++.++|++|+++-+.
T Consensus 7 aGi~G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 7 AGIAGLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp TSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeec
Confidence 5889999999999999999999987
No 415
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=59.54 E-value=10 Score=33.84 Aligned_cols=25 Identities=24% Similarity=0.271 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+.+.+.
T Consensus 7 ~G~mG~~iA~~l~~~G~~V~~~dr~ 31 (291)
T TIGR01505 7 LGIMGSPMSINLAKAGYQLHVTTIG 31 (291)
T ss_pred ecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 7999999999999999999988765
No 416
>PRK06370 mercuric reductase; Validated
Probab=59.54 E-value=20 Score=34.12 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=39.6
Q ss_pred CCceEEEecCCcccccCC---CCeeeeec---------------CCccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 42 TRRVACVTSGGTTVPLEQ---RCVRYIDN---------------FSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~---~~VR~ItN---------------~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.-++++|-.|......+. ...++++. .-.|-.|..+|+.+.++|.+|+++.+...+.|
T Consensus 133 ~~d~lViATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~ 208 (463)
T PRK06370 133 RAKRIFINTGARAAIPPIPGLDEVGYLTNETIFSLDELPEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLP 208 (463)
T ss_pred EeCEEEEcCCCCCCCCCCCCCCcCceEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCCCc
Confidence 347888888876532210 02334332 13788899999999999999999998765544
No 417
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=59.51 E-value=35 Score=32.26 Aligned_cols=54 Identities=13% Similarity=-0.066 Sum_probs=43.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|..+.+.+..+ +-++ .||+|+|-+- |..-|.-+|..|+++||.|+..|..
T Consensus 194 ~PCTp~avi~LL~~~---~i~l--~GK~vvVIGR------------------S~iVGkPla~LL~~~~ATVTicHs~ 247 (345)
T PLN02897 194 VSCTPKGCVELLIRS---GVEI--AGKNAVVIGR------------------SNIVGLPMSLLLQRHDATVSTVHAF 247 (345)
T ss_pred cCCCHHHHHHHHHHh---CCCC--CCCEEEEECC------------------CccccHHHHHHHHHCCCEEEEEcCC
Confidence 567888888777543 1246 7899999877 7777999999999999999999965
No 418
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=59.24 E-value=21 Score=30.82 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=29.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..++|+++ +|..|.++++.+..+|++|+.+.+.
T Consensus 139 ~~~~vlv~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 173 (325)
T TIGR02824 139 AGETVLIHGG------------------ASGIGTTAIQLAKAFGARVFTTAGS 173 (325)
T ss_pred CCCEEEEEcC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5688999876 5778999999999999999988764
No 419
>TIGR01041 ATP_syn_B_arch ATP synthase archaeal, B subunit. Archaeal ATP synthase shares extensive sequence similarity with eukaryotic and prokaryotic V-type (H+)-ATPases.
Probab=59.12 E-value=19 Score=35.17 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=34.9
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHH-HCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~-~~Ga~V~~i~~~ 94 (239)
.+.|+|-+-...-|+. . ..+..+|.++||||. .+|.+|.++.-.
T Consensus 202 ~rtvvv~atsd~p~~~--R------~~a~~~a~tiAEyfr~d~G~~VLli~Ds 246 (458)
T TIGR01041 202 ERAVVFLNLADDPAVE--R------IVTPRMALTAAEYLAFEKDMHVLVILTD 246 (458)
T ss_pred ceEEEEEECCCCCHHH--H------HHHHHHHHHHHHHHHHccCCcEEEEEcC
Confidence 4777777777666776 2 347789999999999 799999999844
No 420
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=59.00 E-value=11 Score=33.41 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.+|..+|..|.+.|++|+++.+.
T Consensus 8 ~G~~G~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 8 AGAIGGLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999984
No 421
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=58.97 E-value=19 Score=31.45 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=29.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.||+|||.+| |.-|..=|+-|++.|+.|++++-..
T Consensus 11 ~~k~VlvvGg-------------------G~va~rKa~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 11 EGKKVLVVGG-------------------GSVALRKARLLLKAGADVTVVSPEF 45 (210)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 6799999998 4567778999999999999999554
No 422
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=58.93 E-value=1.1e+02 Score=25.89 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=14.4
Q ss_pred HHHHHHHHHH-HCCCeEEEEe
Q 026403 73 RGAASTEHLI-KMGYAVIFLY 92 (239)
Q Consensus 73 ~G~~iAe~~~-~~Ga~V~~i~ 92 (239)
.|..++..++ ..||+|+++-
T Consensus 97 lG~~~v~~~l~~~G~~vi~lG 117 (201)
T cd02070 97 IGKNLVATMLEANGFEVIDLG 117 (201)
T ss_pred HHHHHHHHHHHHCCCEEEECC
Confidence 4666666555 6999998776
No 423
>PRK12831 putative oxidoreductase; Provisional
Probab=58.73 E-value=18 Score=34.86 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=29.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.+|+|+|-+| |-.|..+|..+.+.|++|+++++..
T Consensus 280 ~gk~VvVIGg-------------------G~va~d~A~~l~r~Ga~Vtlv~r~~ 314 (464)
T PRK12831 280 VGKKVAVVGG-------------------GNVAMDAARTALRLGAEVHIVYRRS 314 (464)
T ss_pred CCCeEEEECC-------------------cHHHHHHHHHHHHcCCEEEEEeecC
Confidence 5678888877 3468899999999999999999864
No 424
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=58.67 E-value=12 Score=33.44 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+++.+.
T Consensus 9 ~G~mG~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 9 AGSWGTALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999875
No 425
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=58.62 E-value=21 Score=33.92 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=28.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+|+|+|+++ |..|.++|+.|.++|+.|+.....
T Consensus 4 ~~~~~~v~G~-------------------g~~G~~~a~~l~~~g~~v~~~d~~ 37 (445)
T PRK04308 4 QNKKILVAGL-------------------GGTGISMIAYLRKNGAEVAAYDAE 37 (445)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578888877 457889999999999999988754
No 426
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain.
Probab=58.58 E-value=18 Score=32.73 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=31.0
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
|-|+||+| .++..-.|...++++.-+..+|+.|+.+-
T Consensus 1 kyi~vtGg------------v~s~lgkgi~~as~g~ll~~~g~~v~~~K 37 (255)
T cd03113 1 KYIFVTGG------------VVSSLGKGITAASLGRLLKARGLKVTAQK 37 (255)
T ss_pred CEEEEeCC------------cccCcchHHHHHHHHHHHHHCCCeEEEEe
Confidence 56889988 34555689999999999999999999886
No 427
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=58.52 E-value=26 Score=29.61 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCc-cc------ccCCCCeeeeecCCccHHHHHHH----HHHHHCCCe
Q 026403 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGT-TV------PLEQRCVRYIDNFSSGHRGAAST----EHLIKMGYA 87 (239)
Q Consensus 19 ~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT-~e------pID~~~VR~ItN~SSG~~G~~iA----e~~~~~Ga~ 87 (239)
+..+..+...+.+.+.. ..++++-+|+ .. +++. +-||++..+-|.||..+. -.+...+..
T Consensus 3 ~l~~~~~~~~l~~~l~~--------~~ivv~d~G~~~~~~~~~~~~~~-~~~~~~~~~~g~mG~~lpaaiGa~la~p~r~ 73 (196)
T cd02013 3 PMHPRQVLRELEKAMPE--------DAIVSTDIGNICSVANSYLRFEK-PRSFIAPLSFGNCGYALPAIIGAKAAAPDRP 73 (196)
T ss_pred CCCHHHHHHHHHHHCCC--------CEEEEECCcHHHHHHHHhcCcCC-CCeEEcCCCCcccccHHHHHHHHHHhCCCCc
Confidence 45677777777665531 3456664444 22 4543 788998777788885544 444445678
Q ss_pred EEEEecCCCCC
Q 026403 88 VIFLYRRGTCE 98 (239)
Q Consensus 88 V~~i~~~~s~~ 98 (239)
|+.+.|.+++.
T Consensus 74 vv~i~GDG~f~ 84 (196)
T cd02013 74 VVAIAGDGAWG 84 (196)
T ss_pred EEEEEcchHHh
Confidence 99999999854
No 428
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=58.33 E-value=12 Score=33.39 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+++..+
T Consensus 11 ~G~mG~~ia~~la~~g~~V~~~d~~ 35 (282)
T PRK05808 11 AGTMGNGIAQVCAVAGYDVVMVDIS 35 (282)
T ss_pred cCHHHHHHHHHHHHCCCceEEEeCC
Confidence 7999999999999999999998743
No 429
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=58.06 E-value=12 Score=33.89 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||.++|..+.+.|++|+++.+.
T Consensus 8 aGa~G~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 8 AGSFGTAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEecC
Confidence 6999999999999999999999874
No 430
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=57.98 E-value=21 Score=33.04 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=27.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
++|+|+|++| |+.|..++.++.++|+.|+.+...
T Consensus 11 ~~~~ilIiG~-------------------g~~~~~~~~a~~~~G~~v~~~~~~ 44 (395)
T PRK09288 11 SATRVMLLGS-------------------GELGKEVAIEAQRLGVEVIAVDRY 44 (395)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999866 456888999999999999988864
No 431
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=57.79 E-value=14 Score=36.26 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=23.7
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
=.|.||..||..++.+|+.|++.-+.
T Consensus 14 GaG~MG~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 14 GAGAMGAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999998765
No 432
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=57.24 E-value=22 Score=31.39 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=29.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+|++|||-+| |.-|..=++.|++.|+.|++|+-.
T Consensus 24 ~~~~VLVVGG-------------------G~VA~RK~~~Ll~~gA~VtVVap~ 57 (223)
T PRK05562 24 NKIKVLIIGG-------------------GKAAFIKGKTFLKKGCYVYILSKK 57 (223)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEcCC
Confidence 6799999999 566888889999999999999943
No 433
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=57.24 E-value=23 Score=30.45 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=29.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+..|+|+++ +|-.|.++++.+..+|+.|+.+.+.
T Consensus 139 ~~~~vlv~g~------------------~~~ig~~~~~~~~~~g~~v~~~~~~ 173 (323)
T cd05276 139 AGETVLIHGG------------------ASGVGTAAIQLAKALGARVIATAGS 173 (323)
T ss_pred CCCEEEEEcC------------------cChHHHHHHHHHHHcCCEEEEEcCC
Confidence 5689999876 5668999999999999998887764
No 434
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=57.16 E-value=23 Score=24.86 Aligned_cols=27 Identities=30% Similarity=0.427 Sum_probs=23.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+|.-|.+.|-++.++|++|+++-+...
T Consensus 4 aG~sGl~aA~~L~~~g~~v~v~E~~~~ 30 (68)
T PF13450_consen 4 AGISGLAAAYYLAKAGYRVTVFEKNDR 30 (68)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred eCHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 588899999999999999999998754
No 435
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=57.12 E-value=48 Score=27.92 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 23 AAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 23 ~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
+.+.+.+.+.... .+ .||+++|.+ =|.-|..+|..|...|+.|++.-.
T Consensus 7 ~S~~d~i~r~t~~--~l--~Gk~vvV~G-------------------YG~vG~g~A~~lr~~Ga~V~V~e~ 54 (162)
T PF00670_consen 7 QSLVDGIMRATNL--ML--AGKRVVVIG-------------------YGKVGKGIARALRGLGARVTVTEI 54 (162)
T ss_dssp HHHHHHHHHHH-S------TTSEEEEE---------------------SHHHHHHHHHHHHTT-EEEEE-S
T ss_pred hhHHHHHHhcCce--ee--CCCEEEEeC-------------------CCcccHHHHHHHhhCCCEEEEEEC
Confidence 3445555554442 35 678888864 588999999999999999998875
No 436
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=57.08 E-value=13 Score=33.87 Aligned_cols=24 Identities=33% Similarity=0.332 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|..|.++|-+|.++|++|++|.+.
T Consensus 12 Gi~G~s~A~~L~~~g~~V~lie~~ 35 (376)
T PRK11259 12 GSMGSAAGYYLARRGLRVLGLDRF 35 (376)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecc
Confidence 789999999999999999999865
No 437
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=56.75 E-value=38 Score=28.09 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=27.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
.+++|+|=.|+. -.|--|..+|+++..+|+.|+++.
T Consensus 24 ~~~~v~il~G~G---------------nNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 24 KGPRVLILCGPG---------------NNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp TT-EEEEEE-SS---------------HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEECCC---------------CChHHHHHHHHHHHHCCCeEEEEE
Confidence 457777777743 378889999999999999999844
No 438
>PRK08198 threonine dehydratase; Provisional
Probab=56.74 E-value=1.1e+02 Score=28.85 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=24.7
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+|-.|.++|-++...|+.++++....
T Consensus 76 aSsGN~g~alA~~a~~~G~~~~iv~p~~ 103 (404)
T PRK08198 76 ASAGNHAQGVAYAASLLGIKATIVMPET 103 (404)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4789999999999999999999998543
No 439
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=56.59 E-value=1.3e+02 Score=26.83 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=24.6
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+|-.|.++|-++.+.|..++++....
T Consensus 60 SsGN~g~alA~~a~~~G~~~~i~vp~~ 86 (291)
T cd01561 60 TSGNTGIGLAMVAAAKGYRFIIVMPET 86 (291)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEECCC
Confidence 799999999999999999999988654
No 440
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=56.51 E-value=11 Score=34.18 Aligned_cols=25 Identities=24% Similarity=0.275 Sum_probs=23.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.+|..+|..+.++|++|+++.++
T Consensus 10 ~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 10 AGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CCHHHHHHHHHHHhcCCcEEEEecH
Confidence 7999999999999999999999875
No 441
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=56.46 E-value=35 Score=31.35 Aligned_cols=55 Identities=18% Similarity=0.073 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 18 ~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+|-+|.-|...++.+-- ++ .||+|+|-+. |..-|.=+|..++.+||.|++.|...
T Consensus 136 ~PCTp~gi~~ll~~~~i---~l--~Gk~~vVVGr------------------S~iVGkPla~lL~~~naTVtvcHs~T 190 (283)
T COG0190 136 LPCTPAGIMTLLEEYGI---DL--RGKNVVVVGR------------------SNIVGKPLALLLLNANATVTVCHSRT 190 (283)
T ss_pred CCCCHHHHHHHHHHhCC---CC--CCCEEEEECC------------------CCcCcHHHHHHHHhCCCEEEEEcCCC
Confidence 56788888877765433 46 7899999877 66779999999999999999999754
No 442
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=56.43 E-value=24 Score=31.42 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=29.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|||++| +|..|.+.+..+..+|+.|+.+.+.
T Consensus 138 ~g~~VLI~ga------------------~g~vG~~aiqlAk~~G~~Vi~~~~s 172 (325)
T TIGR02825 138 GGETVMVNAA------------------AGAVGSVVGQIAKLKGCKVVGAAGS 172 (325)
T ss_pred CCCEEEEeCC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6789999987 6778999888888999999887764
No 443
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=56.43 E-value=13 Score=33.39 Aligned_cols=43 Identities=23% Similarity=0.203 Sum_probs=29.5
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCE 98 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~ 98 (239)
++.|+|||| +..|=-= +.-+.|+.+++++|..|.+|-...-++
T Consensus 2 ~~iIVvTSG-------KGGVGKT------TttAnig~aLA~~GkKv~liD~DiGLR 44 (272)
T COG2894 2 ARIIVVTSG-------KGGVGKT------TTTANIGTALAQLGKKVVLIDFDIGLR 44 (272)
T ss_pred ceEEEEecC-------CCCcCcc------chhHHHHHHHHHcCCeEEEEecCcCch
Confidence 488999999 2222211 234667777778999999998765543
No 444
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=56.39 E-value=16 Score=35.35 Aligned_cols=27 Identities=30% Similarity=0.441 Sum_probs=24.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
||+.|..+++.++++|+.|..+-|+..
T Consensus 88 tG~vG~~iv~~llkrgf~vra~VRd~~ 114 (411)
T KOG1203|consen 88 TGKVGRRIVKILLKRGFSVRALVRDEQ 114 (411)
T ss_pred CCchhHHHHHHHHHCCCeeeeeccChh
Confidence 999999999999999999999988744
No 445
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=56.15 E-value=13 Score=33.20 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..+++.|++|+...+.
T Consensus 4 lG~mG~~mA~~L~~~G~~V~v~dr~ 28 (288)
T TIGR01692 4 LGNMGGPMAANLLKAGHPVRVFDLF 28 (288)
T ss_pred ccHhHHHHHHHHHhCCCeEEEEeCC
Confidence 6999999999999999999888765
No 446
>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.
Probab=56.05 E-value=26 Score=32.06 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=34.2
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~ 94 (239)
.+.|+|.+-.-.-|+. |+ -...+|.++||||..+ |.+|.++.-.
T Consensus 130 ~~tv~v~~t~~~~~~~----r~----~a~~~a~aiAEyfrd~~g~~VLl~~D~ 174 (276)
T cd01135 130 ERVVLFLNLANDPTIE----RI----ITPRMALTTAEYLAYEKGKHVLVILTD 174 (276)
T ss_pred ceEEEEEecCCCCHHH----HH----HHHHHHHHHHHHHHhccCCeEEEEEcC
Confidence 3777777776666666 22 3677899999999987 9999999954
No 447
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation. ALS catalyzes the conversion of 2 molecules of pyruvate to acetolactate and carbon dioxide. ALS does not contain FAD, and requires TPP and a divalent metal cation for activity.
Probab=56.05 E-value=30 Score=28.80 Aligned_cols=54 Identities=11% Similarity=-0.037 Sum_probs=36.9
Q ss_pred ceEEEecCCcc-------cccCCCCeeeeecCCccHHHHHHHHH----HHHCCCeEEEEecCCCCC
Q 026403 44 RVACVTSGGTT-------VPLEQRCVRYIDNFSSGHRGAASTEH----LIKMGYAVIFLYRRGTCE 98 (239)
Q Consensus 44 k~vlITsGgT~-------epID~~~VR~ItN~SSG~~G~~iAe~----~~~~Ga~V~~i~~~~s~~ 98 (239)
..++++-.|+. -++++ +-||+.+...|.||+.+.-+ +...+..|+.|.|.+++.
T Consensus 15 ~~ii~~d~G~~~~~~~~~~~~~~-~~~~~~~~~~g~mG~~lp~aiGa~la~~~~~vv~i~GDG~f~ 79 (177)
T cd02010 15 DDIVLLDVGAHKIWMARYYRTYA-PNTCLISNGLATMGVALPGAIGAKLVYPDRKVVAVSGDGGFM 79 (177)
T ss_pred CcEEEecCcHHHHHHHHhCCcCC-CCCEEeCCCChhhhhHHHHHHHHHHhCCCCcEEEEEcchHHH
Confidence 45666665552 23332 56999999999999665544 444567899999998853
No 448
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=55.75 E-value=24 Score=33.92 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=26.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.|..|..+|..|.+.|.+|++|.+...+.|
T Consensus 182 gG~iG~E~A~~l~~~G~~Vtlv~~~~~il~ 211 (471)
T PRK06467 182 GGIIGLEMGTVYHRLGSEVDVVEMFDQVIP 211 (471)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecCCCCCC
Confidence 689999999999999999999998766554
No 449
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=55.51 E-value=26 Score=32.31 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=24.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCE 98 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s~~ 98 (239)
.|-.|..+|..+.++|.+|+++++...+.
T Consensus 149 gG~~g~e~A~~L~~~g~~Vtlv~~~~~~l 177 (377)
T PRK04965 149 GGLIGTELAMDLCRAGKAVTLVDNAASLL 177 (377)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEecCCccc
Confidence 46789999999999999999999765543
No 450
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=55.28 E-value=13 Score=36.19 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..|+++|++|++..+.
T Consensus 12 ~G~MG~~iA~~la~~G~~V~v~D~~ 36 (495)
T PRK07531 12 GGVIGGGWAARFLLAGIDVAVFDPH 36 (495)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 8999999999999999999988764
No 451
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=55.20 E-value=21 Score=32.29 Aligned_cols=38 Identities=16% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|...+||+|+ |+|-.|.++|-++...|+.++++....
T Consensus 54 ~g~~~vv~~g~----------------ssGN~g~alA~~a~~~G~~~~ivvp~~ 91 (311)
T TIGR01275 54 KGADTVITVGA----------------IQSNHARATALAAKKLGLDAVLVLREK 91 (311)
T ss_pred cCCCEEEEcCC----------------chhHHHHHHHHHHHHhCCceEEEecCC
Confidence 34567788873 689999999999999999999998763
No 452
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=55.09 E-value=27 Score=33.22 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=39.5
Q ss_pred CCceEEEecCCcccccC---CCCeeeeec---------------CCccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 42 TRRVACVTSGGTTVPLE---QRCVRYIDN---------------FSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 42 ~~k~vlITsGgT~epID---~~~VR~ItN---------------~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.-++++|-.|++...+. ...+.+++. .-.|..|..+|..|.++|.+|+++.+...+.|
T Consensus 134 ~~d~lViAtGs~p~~~pg~~~~~~~v~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 209 (462)
T PRK06416 134 TAKNIILATGSRPRELPGIEIDGRVIWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILP 209 (462)
T ss_pred EeCEEEEeCCCCCCCCCCCCCCCCeEEcchHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCcCC
Confidence 45788888888764332 112222221 12688899999999999999999998765544
No 453
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=54.98 E-value=14 Score=33.32 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+...+.
T Consensus 9 lG~mG~~mA~~l~~~G~~V~v~d~~ 33 (296)
T PRK15461 9 LGQMGSPMASNLLKQGHQLQVFDVN 33 (296)
T ss_pred eCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 8999999999999999999888764
No 454
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=54.59 E-value=23 Score=33.66 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
|-.|..+|..|.++|.+|+++++...+.|
T Consensus 157 G~ig~E~A~~l~~~g~~Vtli~~~~~l~~ 185 (438)
T PRK13512 157 GYISLEVLENLYERGLHPTLIHRSDKINK 185 (438)
T ss_pred CHHHHHHHHHHHhCCCcEEEEecccccch
Confidence 56899999999999999999998655443
No 455
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=54.54 E-value=27 Score=30.20 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=30.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.++.|+|+++ +|.+|.++++.+..+|+.|+.+.+.
T Consensus 144 ~~~~vli~g~------------------~~~~g~~~~~~~~~~g~~v~~~~~~ 178 (328)
T cd08268 144 PGDSVLITAA------------------SSSVGLAAIQIANAAGATVIATTRT 178 (328)
T ss_pred CCCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5678999877 6778999999999999999998765
No 456
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=54.36 E-value=45 Score=30.60 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=44.8
Q ss_pred hhHHhhhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCC
Q 026403 7 SEIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY 86 (239)
Q Consensus 7 ~~~~~f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga 86 (239)
..+.++++..+.+.+++++...+... . +. +++.|++.+| +|.+.+..+-.|...|+
T Consensus 239 ip~~~~~~~~~~~~~~~el~~~~~~~----g-i~-~~~~iv~yC~------------------sG~~A~~~~~~L~~~G~ 294 (320)
T PLN02723 239 VPFPQMLDSSQTLLPAEELKKRFEQE----G-IS-LDSPIVASCG------------------TGVTACILALGLHRLGK 294 (320)
T ss_pred cCHHHhcCCCCCCCCHHHHHHHHHhc----C-CC-CCCCEEEECC------------------cHHHHHHHHHHHHHcCC
Confidence 34556777777777888777654322 1 11 4477888888 79998888888888999
Q ss_pred e-EEEEecC
Q 026403 87 A-VIFLYRR 94 (239)
Q Consensus 87 ~-V~~i~~~ 94 (239)
. |.++.|.
T Consensus 295 ~~v~~YdGs 303 (320)
T PLN02723 295 TDVPVYDGS 303 (320)
T ss_pred CCeeEeCCC
Confidence 5 7777764
No 457
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=54.28 E-value=47 Score=31.49 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=29.3
Q ss_pred EEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 47 CVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 47 lITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
+||.|-| .=|| ..||-+|..+|-.+..+||.++++.
T Consensus 99 ~i~pg~s-tliE---------pTSGNtGigLA~~~a~~Gyk~i~tm 134 (362)
T KOG1252|consen 99 LITPGKS-TLIE---------PTSGNTGIGLAYMAALRGYKCIITM 134 (362)
T ss_pred CccCCce-EEEe---------cCCCchHHHHHHHHHHcCceEEEEe
Confidence 5666633 3356 3799999999999999999999998
No 458
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=54.26 E-value=16 Score=32.62 Aligned_cols=25 Identities=28% Similarity=0.256 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||.++|..|.++|+.|+.+.+.
T Consensus 8 ~G~mG~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 8 LGLIGGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred ecHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999988864
No 459
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=54.21 E-value=23 Score=32.49 Aligned_cols=27 Identities=11% Similarity=0.249 Sum_probs=24.4
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
|+|-.|.++|-++...|+.++++....
T Consensus 73 s~gN~g~alA~~a~~~G~~~~i~vp~~ 99 (331)
T PRK03910 73 IQSNHARQTAAAAAKLGLKCVLLLENP 99 (331)
T ss_pred chhHHHHHHHHHHHHhCCcEEEEEcCC
Confidence 689999999999999999999988654
No 460
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=54.16 E-value=27 Score=33.41 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCE 98 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s~~ 98 (239)
.|-.|..+|..|...|.+|+++++...+.
T Consensus 174 gG~iG~E~A~~l~~~g~~Vtli~~~~~il 202 (450)
T TIGR01421 174 AGYIAVELAGVLHGLGSETHLVIRHERVL 202 (450)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEecCCCCC
Confidence 78899999999999999999999765543
No 461
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=54.07 E-value=20 Score=34.91 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|..|+++|.++.++|.+|++|-+.
T Consensus 15 Gi~G~~~A~~la~rGl~V~LvEk~ 38 (508)
T PRK12266 15 GINGAGIARDAAGRGLSVLLCEQD 38 (508)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecC
Confidence 778999999999999999999975
No 462
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=53.89 E-value=15 Score=37.69 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=30.6
Q ss_pred CeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 61 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+||-|.=.-.|.||..||..|+.+|+.|+++-..
T Consensus 312 ~i~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~ 345 (714)
T TIGR02437 312 DVKQAAVLGAGIMGGGIAYQSASKGTPIVMKDIN 345 (714)
T ss_pred ccceEEEECCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 6777777789999999999999999999999864
No 463
>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=53.57 E-value=34 Score=31.00 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=47.2
Q ss_pred hHHhhhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCe
Q 026403 8 EIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA 87 (239)
Q Consensus 8 ~~~~f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~ 87 (239)
.++++|...-.+.+.+++...-..++..-. .+.++++|.| | | =--++=..|.-.+.++|.+
T Consensus 45 ~le~~~gkev~~~~R~dlE~~~~~il~~a~----~~~Vall~~G------D--p-------mvATTH~~L~~~A~~~Gi~ 105 (260)
T COG1798 45 KLEELIGKEVILLDREDLEENSRSILDRAK----DKDVALLVAG------D--P-------MVATTHVDLRIEAKRRGIE 105 (260)
T ss_pred HHHHHhCCceEeccHHHHhhcchhHHHHHh----cCCEEEEecC------C--c-------ceehhHHHHHHHHHHcCCc
Confidence 467778878888888888887333443321 3469999999 4 1 1223456777778888888
Q ss_pred EEEEecCC
Q 026403 88 VIFLYRRG 95 (239)
Q Consensus 88 V~~i~~~~ 95 (239)
|-+||+.+
T Consensus 106 v~vIh~~S 113 (260)
T COG1798 106 VRVIHGAS 113 (260)
T ss_pred EEEEcccH
Confidence 88888763
No 464
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=53.47 E-value=30 Score=30.52 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=29.9
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|||++| +|..|.+.++.+..+|+.|+.+.+.
T Consensus 143 ~g~~vlI~ga------------------~g~vG~~aiqlA~~~G~~vi~~~~s 177 (329)
T cd08294 143 AGETVVVNGA------------------AGAVGSLVGQIAKIKGCKVIGCAGS 177 (329)
T ss_pred CCCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6789999988 6778999888888999999888764
No 465
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC). P. putida BFDC plays a role in the mandelate pathway, catalyzing the conversion of benzoylformate to benzaldehyde and carbon dioxide. This enzyme is dependent on TPP and a divalent metal cation as cofactors.
Probab=53.42 E-value=46 Score=27.20 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=28.6
Q ss_pred CeeeeecCCccHHHHHHHHHHH----HCCCeEEEEecCCCCC
Q 026403 61 CVRYIDNFSSGHRGAASTEHLI----KMGYAVIFLYRRGTCE 98 (239)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~----~~Ga~V~~i~~~~s~~ 98 (239)
+-|++++.+ |.||..+.-+.- ..+-.|+.+.|.++..
T Consensus 40 ~~~~~~~~~-g~mG~~lp~aiGaala~~~~~vv~i~GDG~f~ 80 (178)
T cd02002 40 PGSYFTLRG-GGLGWGLPAAVGAALANPDRKVVAIIGDGSFM 80 (178)
T ss_pred CCCeeccCC-ccccchHHHHHHHHhcCCCCeEEEEEcCchhh
Confidence 789999988 999977666542 3466799999998854
No 466
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=53.36 E-value=29 Score=30.56 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=30.2
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+..|||++| +|..|.++++.+..+|+.|+.+.+.
T Consensus 145 ~~~~vlI~g~------------------~g~ig~~~~~~a~~~G~~vi~~~~~ 179 (329)
T cd05288 145 PGETVVVSAA------------------AGAVGSVVGQIAKLLGARVVGIAGS 179 (329)
T ss_pred CCCEEEEecC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5688999877 6788999999999999999988764
No 467
>PRK07846 mycothione reductase; Reviewed
Probab=53.27 E-value=30 Score=33.16 Aligned_cols=58 Identities=21% Similarity=0.213 Sum_probs=40.5
Q ss_pred CCceEEEecCCcccccCC---CCeeeeecC---------------CccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 42 TRRVACVTSGGTTVPLEQ---RCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~---~~VR~ItN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.-++++|-.|....+.+. ..++++++. =.|-.|..+|+.|.+.|.+|+++.+...+.|
T Consensus 128 ~~d~lViATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~~ll~ 203 (451)
T PRK07846 128 TADQVVIAAGSRPVIPPVIADSGVRYHTSDTIMRLPELPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLR 203 (451)
T ss_pred EeCEEEEcCCCCCCCCCCCCcCCccEEchHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 357788877766432211 134555543 2788999999999999999999998765443
No 468
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=53.08 E-value=31 Score=32.75 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCceEEEecCCcccccC---CCCeeeeecC---------------CccHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 026403 42 TRRVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (239)
Q Consensus 42 ~~k~vlITsGgT~epID---~~~VR~ItN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~~~~s~~P 99 (239)
.-++++|-.|++..... ...-++++.. -.|..|..+|..|..+|.+|+++.+...+.|
T Consensus 137 ~~d~lviATGs~p~~p~~~~~~~~~v~~~~~~~~~~~~~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 212 (461)
T PRK05249 137 TADKIVIATGSRPYRPPDVDFDHPRIYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLS 212 (461)
T ss_pred EcCEEEEcCCCCCCCCCCCCCCCCeEEcHHHhhchhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 35788888887642111 0022333321 3788999999999999999999998766555
No 469
>cd01133 F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.
Probab=53.02 E-value=26 Score=31.93 Aligned_cols=44 Identities=16% Similarity=0.127 Sum_probs=33.9
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHC-CCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~~~ 94 (239)
.+.|+|-+-.-.-|.. .+ ....+|.++||+|... |.+|.++.-.
T Consensus 127 ~~tvvv~~t~d~~~~~--r~------~~~~~a~~~AEyfr~~~g~~Vl~~~Ds 171 (274)
T cd01133 127 SKTALVYGQMNEPPGA--RA------RVALTGLTMAEYFRDEEGQDVLLFIDN 171 (274)
T ss_pred ceeEEEEECCCCCHHH--HH------HHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 3677777776666666 22 3568999999999987 9999999954
No 470
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=52.96 E-value=0.92 Score=43.25 Aligned_cols=53 Identities=19% Similarity=0.134 Sum_probs=43.9
Q ss_pred ceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 44 k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
..++|++++|...|.+..+++.+|.+|+..+++.+..++.-+.++.++..+-.
T Consensus 80 adl~lvaPaTan~i~Kla~g~aD~~~t~~~~a~~~p~~~aPamn~~M~~~~~t 132 (392)
T COG0452 80 ADLLLVAPATANTIAKLAVGIADNLSTTTLLAAKAPLVLAPAMNVIMYTHPAT 132 (392)
T ss_pred cCEEEecCCChhHHHHHHHhhhccHHHHHHHHhcCcEEEecCcCHHHhhCHHH
Confidence 68999999999999998999999999999999988666556666666665433
No 471
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=52.92 E-value=23 Score=34.14 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+||+|+|-++ |-.|..||.++++.|++|+++.|...
T Consensus 174 ~GKrV~VIG~-------------------GaSA~di~~~l~~~ga~vt~~qRs~~ 209 (443)
T COG2072 174 RGKRVLVIGA-------------------GASAVDIAPELAEVGASVTLSQRSPP 209 (443)
T ss_pred CCCeEEEECC-------------------CccHHHHHHHHHhcCCeeEEEecCCC
Confidence 7788888764 55688999999999999999999865
No 472
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=52.76 E-value=37 Score=32.48 Aligned_cols=70 Identities=20% Similarity=0.170 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHhcC-CCCCCCCceEEEecCCcccccCCCCeeee-------ecCCccHHHHHHHHHHHHCCCeEEEEe
Q 026403 21 DRAAISQKLKEFIALN-SSESGTRRVACVTSGGTTVPLEQRCVRYI-------DNFSSGHRGAASTEHLIKMGYAVIFLY 92 (239)
Q Consensus 21 ~~~~i~~~v~~~~~~~-~~~~~~~k~vlITsGgT~epID~~~VR~I-------tN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (239)
+...+...+.+-+..- ... ++..+++++.||-.-=- .|.-+ =+.+.|..|...++-+-+.|++|..+.
T Consensus 35 ~F~~~~~~~~~~L~~v~~t~--~~~~~ll~gsGt~amEA--av~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~ 110 (383)
T COG0075 35 DFVGIMKEVLEKLRKVFGTE--NGDVVLLSGSGTLAMEA--AVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLE 110 (383)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CCcEEEEcCCcHHHHHH--HHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEe
Confidence 4455555555444321 111 45788888888753211 22222 234789999999999999999999999
Q ss_pred cC
Q 026403 93 RR 94 (239)
Q Consensus 93 ~~ 94 (239)
.+
T Consensus 111 ~~ 112 (383)
T COG0075 111 VE 112 (383)
T ss_pred CC
Confidence 76
No 473
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=52.67 E-value=26 Score=33.50 Aligned_cols=36 Identities=28% Similarity=0.499 Sum_probs=29.3
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.||+|+|-+| |-.|...|..+.+.|++|+++++...
T Consensus 271 ~gk~VvVIGg-------------------G~~a~d~A~~l~~~G~~Vtlv~~~~~ 306 (449)
T TIGR01316 271 AGKSVVVIGG-------------------GNTAVDSARTALRLGAEVHCLYRRTR 306 (449)
T ss_pred CCCeEEEECC-------------------CHHHHHHHHHHHHcCCEEEEEeecCc
Confidence 4577777777 44788999999999999999998643
No 474
>PRK07476 eutB threonine dehydratase; Provisional
Probab=52.55 E-value=53 Score=30.01 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.9
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|||-.|.++|-++...|+.++++...
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~ 99 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSR 99 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999999999999999999988854
No 475
>CHL00059 atpA ATP synthase CF1 alpha subunit
Probab=52.54 E-value=18 Score=35.63 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=34.0
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+.|+|.+.+..-|.. |+ -+...|.++||||..+|.+|.+++-.
T Consensus 198 ~~tvvV~atad~~~~~----r~----~ap~~a~aiAEyfr~~G~~VLlv~Dd 241 (485)
T CHL00059 198 EYTIVVAETADSPATL----QY----LAPYTGAALAEYFMYRGRHTLIIYDD 241 (485)
T ss_pred hceEEEEeCCCCCHHH----HH----HHHHHHhhHHHHHHHcCCCEEEEEcC
Confidence 3678888876666655 33 35667999999999999999999844
No 476
>PRK04196 V-type ATP synthase subunit B; Provisional
Probab=52.49 E-value=29 Score=33.87 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=33.1
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHH-HCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~-~~Ga~V~~i~~~ 94 (239)
.+.|+|-+-...-++. | ..+..+|.++||||. .+|.+|.++.-.
T Consensus 204 ~rtvvV~atsd~p~~~----R----~~a~~~a~tiAEyfr~d~G~~VLli~Ds 248 (460)
T PRK04196 204 ERSVVFLNLADDPAIE----R----ILTPRMALTAAEYLAFEKGMHVLVILTD 248 (460)
T ss_pred ceEEEEEEcCCCCHHH----H----HHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 3666776665555555 2 247889999999999 699999999854
No 477
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=52.48 E-value=32 Score=30.01 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=29.6
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+..++|++| +|..|.++++.+..+|+.|+.+.+.
T Consensus 166 ~~~~vlI~g~------------------~~~iG~~~~~~~~~~g~~v~~~~~~ 200 (342)
T cd08266 166 PGETVLVHGA------------------GSGVGSAAIQIAKLFGATVIATAGS 200 (342)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5688999987 5668999999999999999887654
No 478
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=52.39 E-value=17 Score=29.18 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=28.6
Q ss_pred CeeeeecC----CccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 61 CVRYIDNF----SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 61 ~VR~ItN~----SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+.+.|. +.|+ |.++|+-+...|.+|++..+-+
T Consensus 38 ~vev~~np~~~~~~g~-G~~~a~~l~~~gvdvvi~~~iG 75 (121)
T COG1433 38 NVEVIENPAASAEKGA-GIRIAELLVDEGVDVVIASNIG 75 (121)
T ss_pred EEEEeecccccccCcc-hHHHHHHHHHcCCCEEEECccC
Confidence 78899998 4554 8999999999999999988644
No 479
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=52.33 E-value=30 Score=30.34 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=31.0
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|..|||.+| +|..|.++++.+..+|+.|+.+.+..
T Consensus 139 ~g~~vlI~g~------------------~g~ig~~~~~~a~~~G~~v~~~~~~~ 174 (324)
T cd08292 139 PGQWLIQNAA------------------GGAVGKLVAMLAAARGINVINLVRRD 174 (324)
T ss_pred CCCEEEEccc------------------ccHHHHHHHHHHHHCCCeEEEEecCH
Confidence 5688999877 78899999999999999999887654
No 480
>PRK14031 glutamate dehydrogenase; Provisional
Probab=52.29 E-value=55 Score=31.95 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=36.2
Q ss_pred HHHHHHHHHhc-CCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 25 ISQKLKEFIAL-NSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 25 i~~~v~~~~~~-~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
++..+...+.. ..++ +|++|+|.++ |.-|...|+.+.+.|+.|+.|+-
T Consensus 211 v~~~~~~~~~~~g~~l--~g~rVaVQGf-------------------GNVG~~aA~~L~e~GAkVVaVSD 259 (444)
T PRK14031 211 NIYFLMEMLKTKGTDL--KGKVCLVSGS-------------------GNVAQYTAEKVLELGGKVVTMSD 259 (444)
T ss_pred HHHHHHHHHHhcCCCc--CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEEC
Confidence 44444444442 2345 7899999876 77899999999999999999884
No 481
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=52.15 E-value=30 Score=31.32 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
+|...+||+|| |+|-.|.++|-++..+|+.++++..+.
T Consensus 50 ~g~~~vv~~gg----------------s~GN~g~alA~~a~~~G~~~~i~v~~~ 87 (307)
T cd06449 50 KGADTLVTVGG----------------IQSNHTRQVAAVAAKLGLKCVLVQENW 87 (307)
T ss_pred cCCCEEEECCC----------------chhHHHHHHHHHHHHcCCeEEEEecCC
Confidence 44567778762 699999999999999999999988754
No 482
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=51.98 E-value=14 Score=34.39 Aligned_cols=34 Identities=32% Similarity=0.501 Sum_probs=29.3
Q ss_pred CCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 60 RCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 60 ~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
+.|=||- -|-||..+|..+++.||.|+...+..+
T Consensus 36 ~~iGFIG---LG~MG~~M~~nLik~G~kVtV~dr~~~ 69 (327)
T KOG0409|consen 36 TRIGFIG---LGNMGSAMVSNLIKAGYKVTVYDRTKD 69 (327)
T ss_pred ceeeEEe---eccchHHHHHHHHHcCCEEEEEeCcHH
Confidence 3566776 899999999999999999999997644
No 483
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=51.89 E-value=16 Score=37.40 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=30.2
Q ss_pred CeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 61 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
+++-|.=.-.|.||..||..|+..|+.|+++-..
T Consensus 312 ~i~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~ 345 (715)
T PRK11730 312 PVKQAAVLGAGIMGGGIAYQSASKGVPVIMKDIN 345 (715)
T ss_pred ccceEEEECCchhHHHHHHHHHhCCCeEEEEeCC
Confidence 6777777789999999999999999999999854
No 484
>PRK08526 threonine dehydratase; Provisional
Probab=51.69 E-value=1.8e+02 Score=27.75 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=25.2
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|+|-.|.++|-++...|..++++....
T Consensus 74 aSaGNhg~avA~aa~~~Gi~~~IvmP~~ 101 (403)
T PRK08526 74 ASAGNHAQGVAISAKKFGIKAVIVMPEA 101 (403)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5899999999999999999999988543
No 485
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=51.26 E-value=38 Score=30.13 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=22.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|...|+.+.++|+.|+-++-.
T Consensus 40 fG~VG~~~a~~l~~~Ga~vv~vsD~ 64 (244)
T PF00208_consen 40 FGNVGSHAARFLAELGAKVVAVSDS 64 (244)
T ss_dssp SSHHHHHHHHHHHHTTEEEEEEEES
T ss_pred CCHHHHHHHHHHHHcCCEEEEEecC
Confidence 5999999999999999999888643
No 486
>PRK04148 hypothetical protein; Provisional
Probab=51.22 E-value=39 Score=27.57 Aligned_cols=24 Identities=21% Similarity=0.207 Sum_probs=20.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.| .|.++|+.+.++|++|+.+--+
T Consensus 25 ~G-fG~~vA~~L~~~G~~ViaIDi~ 48 (134)
T PRK04148 25 IG-FYFKVAKKLKESGFDVIVIDIN 48 (134)
T ss_pred ec-CCHHHHHHHHHCCCEEEEEECC
Confidence 56 6889999999999999999843
No 487
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=51.17 E-value=19 Score=32.54 Aligned_cols=25 Identities=24% Similarity=0.209 Sum_probs=22.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..++++|++|+...+.
T Consensus 8 lG~mG~~la~~L~~~g~~V~~~dr~ 32 (298)
T TIGR00872 8 LGRMGANIVRRLAKRGHDCVGYDHD 32 (298)
T ss_pred chHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999887654
No 488
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=51.09 E-value=17 Score=33.35 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.|.||..+|..|+++||+|+..-+...
T Consensus 8 LG~MG~pmA~~L~~aG~~v~v~~r~~~ 34 (286)
T COG2084 8 LGIMGSPMAANLLKAGHEVTVYNRTPE 34 (286)
T ss_pred CchhhHHHHHHHHHCCCEEEEEeCChh
Confidence 799999999999999999999998744
No 489
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=50.98 E-value=70 Score=28.45 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=42.6
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccH--HHHHHHHHHHHCCCeEE
Q 026403 12 FFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGH--RGAASTEHLIKMGYAVI 89 (239)
Q Consensus 12 f~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~--~G~~iAe~~~~~Ga~V~ 89 (239)
+|+-...+..+...+..+.++... ++ .++.+++.++ +.+|+ +..+||.++.++|..|+
T Consensus 78 ~~d~~~~~~~~~~~l~~~~~~~~~---~~-~~~nl~l~G~----------------~G~GKThLa~Ai~~~l~~~g~sv~ 137 (254)
T COG1484 78 EFDFEFQPGIDKKALEDLASLVEF---FE-RGENLVLLGP----------------PGVGKTHLAIAIGNELLKAGISVL 137 (254)
T ss_pred cccccCCcchhHHHHHHHHHHHHH---hc-cCCcEEEECC----------------CCCcHHHHHHHHHHHHHHcCCeEE
Confidence 455555555555556556555543 12 4577888877 35676 57788888999999999
Q ss_pred EEecC
Q 026403 90 FLYRR 94 (239)
Q Consensus 90 ~i~~~ 94 (239)
|++-+
T Consensus 138 f~~~~ 142 (254)
T COG1484 138 FITAP 142 (254)
T ss_pred EEEHH
Confidence 99954
No 490
>PRK08972 fliI flagellum-specific ATP synthase; Validated
Probab=50.98 E-value=28 Score=33.97 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=32.7
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.+.|+|-+-.-.-|.. -+ -...+|.++||||..+|.+|.++.-.
T Consensus 217 ~rtvvv~atsd~p~~~--R~------~a~~~A~tiAEyfrd~G~~VLl~~Ds 260 (444)
T PRK08972 217 ARSVVVAAPADTSPLM--RL------KGCETATTIAEYFRDQGLNVLLLMDS 260 (444)
T ss_pred ccEEEEEECCCCCHHH--HH------HHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3666666655555555 22 37789999999999999999999844
No 491
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=50.43 E-value=18 Score=35.35 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~ 95 (239)
.|.||..+|..++++|++|+...+..
T Consensus 7 LG~MG~~mA~nL~~~G~~V~v~drt~ 32 (467)
T TIGR00873 7 LAVMGSNLALNMADHGFTVSVYNRTP 32 (467)
T ss_pred eHHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 79999999999999999999887653
No 492
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=50.18 E-value=18 Score=35.38 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=24.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~~s 96 (239)
.|.||..+|..++++|++|+...+..+
T Consensus 9 LG~MG~~lA~nL~~~G~~V~v~dr~~~ 35 (470)
T PTZ00142 9 LAVMGQNLALNIASRGFKISVYNRTYE 35 (470)
T ss_pred EhHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 799999999999999999999887643
No 493
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=50.01 E-value=25 Score=34.09 Aligned_cols=24 Identities=21% Similarity=0.302 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
|..|+++|.++.++|.+|++|-+.
T Consensus 15 Gi~G~~~A~~la~rG~~V~LlEk~ 38 (502)
T PRK13369 15 GINGAGIARDAAGRGLKVLLCEKD 38 (502)
T ss_pred CHHHHHHHHHHHhCCCcEEEEECC
Confidence 778999999999999999999976
No 494
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.97 E-value=1.1e+02 Score=28.11 Aligned_cols=64 Identities=9% Similarity=0.036 Sum_probs=47.4
Q ss_pred hHHhhhhcC----CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHH
Q 026403 8 EIESFFDSA----PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK 83 (239)
Q Consensus 8 ~~~~f~~~~----~~~~~~~~i~~~v~~~~~~~~~~~~~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~ 83 (239)
+.-++|... -.|.+|..+.+.+..+- -++ .||+|+|-+. |..-|.-+|..|++
T Consensus 125 n~g~l~~~~~~~~~~PcTp~ail~ll~~y~---i~l--~Gk~vvViGr------------------S~iVG~Pla~lL~~ 181 (295)
T PRK14174 125 NLGRLVMGHLDKCFVSCTPYGILELLGRYN---IET--KGKHCVVVGR------------------SNIVGKPMANLMLQ 181 (295)
T ss_pred hHHHHhcCCCCCCcCCCCHHHHHHHHHHhC---CCC--CCCEEEEECC------------------CCcchHHHHHHHHh
Confidence 444555442 25678888877665442 246 7899999887 77789999999887
Q ss_pred ----CCCeEEEEecC
Q 026403 84 ----MGYAVIFLYRR 94 (239)
Q Consensus 84 ----~Ga~V~~i~~~ 94 (239)
+|+.|+..|..
T Consensus 182 ~~~~~~atVt~~hs~ 196 (295)
T PRK14174 182 KLKESNCTVTICHSA 196 (295)
T ss_pred ccccCCCEEEEEeCC
Confidence 79999999964
No 495
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=49.82 E-value=24 Score=38.23 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=30.1
Q ss_pred CceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCC----CeEEEEecCCC
Q 026403 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG----YAVIFLYRRGT 96 (239)
Q Consensus 43 ~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~G----a~V~~i~~~~s 96 (239)
.++||||++ ||-.|..+++.++++| +.|+.+.|..+
T Consensus 971 ~~~VlvTGa------------------tGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~ 1010 (1389)
T TIGR03443 971 PITVFLTGA------------------TGFLGSFILRDLLTRRSNSNFKVFAHVRAKS 1010 (1389)
T ss_pred CceEEEeCC------------------ccccHHHHHHHHHhcCCCCCcEEEEEECcCC
Confidence 477888876 9999999999999988 78888887643
No 496
>PRK06475 salicylate hydroxylase; Provisional
Probab=49.81 E-value=32 Score=31.92 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHCCCeEEEEecCCCC
Q 026403 71 GHRGAASTEHLIKMGYAVIFLYRRGTC 97 (239)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~~~~s~ 97 (239)
|--|.++|..|.++|++|+++-+....
T Consensus 11 GiaGl~~A~~L~~~G~~V~i~E~~~~~ 37 (400)
T PRK06475 11 GVAGLSAALELAARGWAVTIIEKAQEL 37 (400)
T ss_pred CHHHHHHHHHHHhCCCcEEEEecCCcc
Confidence 456999999999999999999976543
No 497
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=49.72 E-value=18 Score=33.41 Aligned_cols=26 Identities=27% Similarity=0.376 Sum_probs=23.8
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEec
Q 026403 68 FSSGHRGAASTEHLIKMGYAVIFLYR 93 (239)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~~ 93 (239)
.+||-+|.++|-.+..+||.++++.-
T Consensus 68 ~TSGNTGI~LA~vaa~~Gy~~iivmP 93 (300)
T COG0031 68 ATSGNTGIALAMVAAAKGYRLIIVMP 93 (300)
T ss_pred cCCChHHHHHHHHHHHcCCcEEEEeC
Confidence 37999999999999999999999983
No 498
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=49.63 E-value=20 Score=33.29 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|..|.++|.+|.++|++|++|-+.
T Consensus 9 aG~~G~~~A~~La~~g~~V~vle~~ 33 (410)
T PRK12409 9 AGITGVTTAYALAQRGYQVTVFDRH 33 (410)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999999999999999875
No 499
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=49.57 E-value=32 Score=31.65 Aligned_cols=37 Identities=11% Similarity=0.194 Sum_probs=30.4
Q ss_pred CCceEEEecCCcccccCCCCeeeeecCCccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 42 ~~k~vlITsGgT~epID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|...|||+|| |+|-+|.++|-++.+.|+.++++...
T Consensus 65 ~G~~~vvs~G~----------------s~GN~g~alA~aa~~~G~~~~iv~~~ 101 (337)
T PRK12390 65 QGADTLVSIGG----------------VQSNHTRQVAAVAAHLGMKCVLVQEN 101 (337)
T ss_pred cCCCEEEEeCC----------------CccHHHHHHHHHHHHcCCeEEEEeCC
Confidence 44566777763 68999999999999999999998743
No 500
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=49.43 E-value=21 Score=32.22 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Q 026403 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (239)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~~~ 94 (239)
.|.||..+|..+++.|++|++..+.
T Consensus 8 lG~MG~~mA~~L~~~g~~v~v~dr~ 32 (301)
T PRK09599 8 LGRMGGNMARRLLRGGHEVVGYDRN 32 (301)
T ss_pred ccHHHHHHHHHHHHCCCeEEEEECC
Confidence 7999999999999999999887764
Done!