Query 026406
Match_columns 239
No_of_seqs 118 out of 927
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 12:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ibx_A TENA, HP1287, putative 100.0 5.8E-56 2E-60 373.6 21.5 214 10-238 3-221 (221)
2 3mvu_A TENA family transcripti 100.0 4.8E-56 1.7E-60 375.3 20.7 214 8-238 3-226 (226)
3 3no6_A Transcriptional activat 100.0 2.2E-56 7.4E-61 382.1 18.1 213 10-238 18-237 (248)
4 4fn6_A Thiaminase-2, thiaminas 100.0 2.7E-55 9.2E-60 371.4 18.9 211 12-238 1-218 (229)
5 2qcx_A Transcriptional activat 100.0 6.3E-53 2.2E-57 363.6 26.6 212 11-238 27-242 (263)
6 1z72_A Transcriptional regulat 100.0 4.6E-53 1.6E-57 356.6 23.5 207 12-237 14-224 (225)
7 2f2g_A SEED maturation protein 100.0 6.4E-54 2.2E-58 360.9 18.2 211 11-238 3-220 (221)
8 1rtw_A Transcriptional activat 100.0 2.5E-52 8.5E-57 351.2 22.4 204 14-238 2-208 (220)
9 2gm8_A TENA homolog/THI-4 thia 100.0 2.5E-52 8.7E-57 351.4 19.7 209 10-238 7-220 (221)
10 3rm5_A Hydroxymethylpyrimidine 100.0 3.8E-51 1.3E-55 385.1 26.0 215 9-238 327-549 (550)
11 2qzc_A Transcriptional activat 100.0 5.1E-52 1.8E-56 347.8 17.7 202 11-238 4-209 (214)
12 1udd_A Transcriptional regulat 100.0 1.2E-51 4.2E-56 348.3 18.0 208 11-238 2-214 (226)
13 1wwm_A Hypothetical protein TT 100.0 1.7E-49 5.9E-54 326.9 19.1 190 11-236 1-190 (190)
14 2a2m_A Hypothetical protein BT 100.0 5.2E-49 1.8E-53 338.1 21.8 202 12-238 48-251 (258)
15 3oql_A TENA homolog; transcrip 100.0 2.3E-43 7.9E-48 302.2 14.8 220 2-238 9-247 (262)
16 1rcw_A CT610, CADD; iron, DI-i 100.0 1.4E-35 4.6E-40 250.0 15.0 203 11-238 5-221 (231)
17 3dde_A TENA/THI-4 protein, dom 100.0 1.2E-31 4.1E-36 227.6 13.3 206 12-237 2-219 (239)
18 3hlx_A Pyrroloquinoline-quinon 100.0 3.1E-29 1.1E-33 214.3 14.6 201 12-237 10-227 (258)
19 3bjd_A Putative 3-oxoacyl-(acy 99.9 4.7E-23 1.6E-27 182.5 13.7 202 12-237 108-324 (332)
20 3b5o_A CADD-like protein of un 99.3 3.4E-11 1.2E-15 100.3 14.8 182 28-236 23-226 (244)
21 2q32_A Heme oxygenase 2, HO-2; 98.1 0.00016 5.6E-09 61.5 16.1 115 7-132 26-142 (264)
22 1wzd_A Heme oxygenase; electro 98.0 0.00017 6E-09 59.3 15.1 175 8-196 2-183 (215)
23 1wov_A Heme oxygenase 2; HOMO 98.0 0.00023 7.9E-09 60.1 15.4 171 12-196 2-181 (250)
24 1we1_A Heme oxygenase 1; oxido 97.8 0.00098 3.4E-08 55.8 15.4 109 12-132 3-113 (240)
25 1n45_A Heme oxygenase 1, HO-1; 97.8 0.0015 5E-08 54.5 16.1 112 10-132 9-122 (233)
26 1j02_A Heme oxygenase 1; alpha 97.7 0.0018 6.3E-08 55.0 15.5 113 9-132 8-122 (267)
27 1j77_A HEMO, heme oxygenase; p 87.1 1.6 5.6E-05 35.2 6.9 60 6-68 3-62 (209)
28 1sk7_A Hypothetical protein PA 86.0 2.2 7.4E-05 34.1 7.0 62 4-68 4-65 (198)
29 4h5l_A Nucleoprotein; nucleoca 59.2 43 0.0015 27.7 8.1 90 28-122 148-241 (253)
30 3ov9_A Nucleoprotein; orthogon 55.6 56 0.0019 26.8 8.1 91 27-122 141-235 (245)
31 2veb_A Protoglobin; hemoprotei 49.4 31 0.0011 27.4 5.6 49 183-238 143-191 (195)
32 1dvk_A PRP18; PRE-mRNA splicin 44.6 23 0.00078 27.7 3.9 43 33-75 67-115 (173)
33 2f3y_B Voltage-dependent L-typ 37.8 13 0.00044 19.5 1.1 9 49-57 4-12 (26)
34 2be6_D Voltage-dependent L-typ 37.8 17 0.00058 20.7 1.6 15 43-57 6-21 (37)
35 1unk_A Colicin E7; immunity pr 26.9 68 0.0023 22.0 3.6 39 174-226 7-46 (87)
36 3l9k_W Dynein intermediate cha 23.6 82 0.0028 18.1 3.0 24 175-198 8-31 (38)
37 3u43_A Colicin-E2 immunity pro 23.2 99 0.0034 21.5 4.0 38 174-225 7-44 (94)
38 2k7r_A Primosomal protein DNAI 22.2 1.7E+02 0.0059 20.2 5.3 62 1-63 1-65 (106)
No 1
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=100.00 E-value=5.8e-56 Score=373.59 Aligned_cols=214 Identities=15% Similarity=0.194 Sum_probs=198.6
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHH
Q 026406 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..|+|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+..
T Consensus 3 ~~M~f~~~L~~~~~~~~~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~~~ 77 (221)
T 3ibx_A 3 FTMQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACD-----EAVMREFSN 77 (221)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-----HHHHHHHHH
T ss_pred CcchHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999 788999998
Q ss_pred HHhhH-HHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-
Q 026406 90 GMAGL-HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT- 164 (239)
Q Consensus 90 ~~~~i-~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~- 164 (239)
.++++ .+|+++|+++++.+||+.+ +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++...+.
T Consensus 78 ~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~~~ 156 (221)
T 3ibx_A 78 AIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG-FKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNA 156 (221)
T ss_dssp HHHHHHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHTHHHHHHHHHHHHHHTCSSST
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88765 5799999999999999964 5789999999999999994 6689999999999999999999999876532
Q ss_pred CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
..+++|++||++|+|++|.+.|+++++++|++++.+++ +++++|+++|+++|++|++||||||++
T Consensus 157 ~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 221 (221)
T 3ibx_A 157 LEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSK---------QEIEKLKEIFITTSEYEYLFWDMAYQS 221 (221)
T ss_dssp TTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 24578999999999999999999999999999988888 899999999999999999999999974
No 2
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=100.00 E-value=4.8e-56 Score=375.32 Aligned_cols=214 Identities=19% Similarity=0.245 Sum_probs=198.1
Q ss_pred hcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHH
Q 026406 8 DAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVI 87 (239)
Q Consensus 8 ~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l 87 (239)
-++.++|+++|+++++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+
T Consensus 3 ~~p~g~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~ 77 (226)
T 3mvu_A 3 SEPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSET-----HSEMLAA 77 (226)
T ss_dssp CSTTCHHHHHHHHHTTTHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-----HHHHHHH
T ss_pred CCCCCcHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999 7889999
Q ss_pred HHHHhhHH-HHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026406 88 LGGMAGLH-DEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 88 ~~~~~~i~-~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
...++.+. +|+++|+++++.+||+.+ +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++....
T Consensus 78 ~~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~ 156 (226)
T 3mvu_A 78 VGTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAG-YSGDLLDLLAALAPCVMGYGEIGKRLTAEA 156 (226)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98887775 599999999999999863 5789999999999999994 668999999999999999999999986542
Q ss_pred CCCCchHHHHhhhcCChHHHHHHHHHHHHHH-----HHHh-hcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026406 164 TNTPPELQEVCQRWGNDGFGQYCHSLKKIAN-----RLLE-KASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld-----~~~~-~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~ 237 (239)
.+++|++||++|+|++|.+.|+++++++| +++. .+++ +++++|+++|+++|++|++||||||+
T Consensus 157 --~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~ 225 (226)
T 3mvu_A 157 --TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSS---------PRWSRLCQTFHTATELEVGFWQMGLT 225 (226)
T ss_dssp --SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGS---------HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred --CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccCh---------HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 35689999999999999999999999999 8876 6677 89999999999999999999999997
Q ss_pred C
Q 026406 238 T 238 (239)
Q Consensus 238 ~ 238 (239)
+
T Consensus 226 ~ 226 (226)
T 3mvu_A 226 P 226 (226)
T ss_dssp C
T ss_pred C
Confidence 4
No 3
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=100.00 E-value=2.2e-56 Score=382.08 Aligned_cols=213 Identities=15% Similarity=0.157 Sum_probs=197.1
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHH
Q 026406 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..++|++.|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|||+ .+++..+..
T Consensus 18 ~~~~ft~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~-----~~~~~~~~~ 92 (248)
T 3no6_A 18 QGMTFSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSS-----MEDVKFLVE 92 (248)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSC-----HHHHHHHHH
T ss_pred CCccHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999 788999998
Q ss_pred HHhhH-HHHHHHHHHHHHHcCCCC----CCCCcchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026406 90 GMAGL-HDEIAWFKKEASKWGVEL----SETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 90 ~~~~i-~~E~~~h~~~~~~~gi~~----~~~~~~pa~~aY~~~l~~~~~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
.++.+ .+|+++|+++++.+||+. +..+++|+|++||+||++++ .. ++++++++|++||+|+|.+||+++...+
T Consensus 93 ~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a-~~~g~~~~~laAl~PC~w~Y~eig~~l~~~~ 171 (248)
T 3no6_A 93 QIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNA-FARENAAFTIAAMAPCPYVYAVIGKRAMEDP 171 (248)
T ss_dssp HHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHH-HHCSSTHHHHHHHTHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88775 679999999999999985 34689999999999999995 55 7999999999999999999999987643
Q ss_pred C-CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 164 T-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~-~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+ ..+++|++||++|+ ++|.+.|+++++++|++++.+++ +++++|+++|+++|++|++||||||+.
T Consensus 172 ~~~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~ay~~ 237 (248)
T 3no6_A 172 KLNKESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSE---------TEKKEIKENFLQSTIHERHFFNMAYIN 237 (248)
T ss_dssp TCCTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3 14578999999999 99999999999999999988888 899999999999999999999999964
No 4
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=100.00 E-value=2.7e-55 Score=371.42 Aligned_cols=211 Identities=14% Similarity=0.170 Sum_probs=196.0
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
|+|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+.+.+
T Consensus 1 M~ft~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~-----~~~~~~~~~~~ 75 (229)
T 4fn6_A 1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNS-----MNDVKFLVEQI 75 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCS-----HHHHHHHHHHH
T ss_pred CcHHHHHHHhHHHHHHHHHCChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999 78899999888
Q ss_pred hhH-HHHHHHHHHHHHHcCCCCC----CCCcchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 026406 92 AGL-HDEIAWFKKEASKWGVELS----ETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPDTN 165 (239)
Q Consensus 92 ~~i-~~E~~~h~~~~~~~gi~~~----~~~~~pa~~aY~~~l~~~~~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~ 165 (239)
+.+ .+|+++|+++++.+||+.+ ..+++|+|.+|++||++++ .. ++++++++|++||+|+|.+||+++...++.
T Consensus 76 ~~~~~~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~ 154 (229)
T 4fn6_A 76 EFMVEGEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQA-HSRENAIYTIAAMAPCPYIYAELAKRSQSDHKL 154 (229)
T ss_dssp HHHHSCCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHH-HHCCSHHHHHHHHTHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 775 6799999999999999864 4689999999999999995 55 899999999999999999999998765431
Q ss_pred -CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 166 -TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 -~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|++||++|+ ++|.+.|+++++++|++++.+++ +++++|+++|+++|++|++||||||+.
T Consensus 155 ~~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 218 (229)
T 4fn6_A 155 NREKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSD---------KELEQVKQVFLESCIHERRFFNMAMTL 218 (229)
T ss_dssp CTTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3578999999999 99999999999999999988888 899999999999999999999999974
No 5
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=100.00 E-value=6.3e-53 Score=363.63 Aligned_cols=212 Identities=18% Similarity=0.197 Sum_probs=197.1
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+...
T Consensus 27 mm~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~-----~~~~~~l~~~ 101 (263)
T 2qcx_A 27 GMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKD-----LYTTGRMASH 101 (263)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999 7889999998
Q ss_pred HhhH-HHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026406 91 MAGL-HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~i-~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
++.+ ..|+++|+++++.+||+.+ +.+|+|+|.+|++||++++ ..++++++++|++||+|+|.+||+++..... .
T Consensus 102 i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a-~~g~~~~~laAl~pC~w~Y~~ig~~l~~~~~-~ 179 (263)
T 2qcx_A 102 AQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSV-LSGNFAEILAALLPCYWLYYEVGEKLLHCDP-G 179 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHHHHTTCCC-C
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccC-C
Confidence 8764 6699999999999999864 5789999999999999994 6789999999999999999999999866433 3
Q ss_pred CchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+++|.+||+.|++++|.+.|+.+++++|++++..++ ++++++.++|+++|++|++||||+|+.
T Consensus 180 ~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 242 (263)
T 2qcx_A 180 HPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTE---------EVRAKMKENFVISSYYEYQFWGMAYRK 242 (263)
T ss_dssp SHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999988887 899999999999999999999999964
No 6
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=100.00 E-value=4.6e-53 Score=356.62 Aligned_cols=207 Identities=17% Similarity=0.211 Sum_probs=190.7
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++ .+++..+...+
T Consensus 14 ~~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~~ 88 (225)
T 1z72_A 14 GLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADK-----LESKLRFAKQL 88 (225)
T ss_dssp HHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-----HHHHHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 7799999999999999999999999999999999999999999999999999999999999999 78899999888
Q ss_pred hh-HHHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 026406 92 AG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTP 167 (239)
Q Consensus 92 ~~-i~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~ 167 (239)
+. +.+|+.+|+++++.+||+.+ +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||++ ... .+.+
T Consensus 89 ~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~i~~~-~~~-~~~~ 165 (225)
T 1z72_A 89 GFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAV-ASSDYAHLLVMLVIAEGLYLDWGSK-DLA-LPEV 165 (225)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHTC-SSC-CCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHh-hcc-CCCc
Confidence 76 46799999999999999974 5789999999999999994 6779999999999999999999999 543 3345
Q ss_pred chHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026406 168 PELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 168 ~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~ 237 (239)
++|++||+.|++++|.+.|+++++++|+++.. ++ +++ +++++|+++|++|++||||+|+
T Consensus 166 ~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~---------~~~-~~~~~f~~a~~lE~~Fwd~a~~ 224 (225)
T 1z72_A 166 YIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-RE---------DLT-ELQQRWNQAVALELAFFDIGYD 224 (225)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CC---------CHH-HHHHHHHHHHHHHHHHTTTTC-
T ss_pred chHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CH---------HHH-HHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999887 76 677 9999999999999999999986
No 7
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=100.00 E-value=6.4e-54 Score=360.87 Aligned_cols=211 Identities=65% Similarity=1.129 Sum_probs=194.0
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhH----HHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGD----TEV 86 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~----~~~ 86 (239)
.++|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .++ +..
T Consensus 3 ~~~f~~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~ 77 (221)
T 2f2g_A 3 KRGVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACK-----DSGESSDMEV 77 (221)
T ss_dssp --CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCSCTTHHHH
T ss_pred CCcHHHHHHHhCHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhhHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999 455 899
Q ss_pred HHHHHhhHHHHHHHHHHHHHHcCCCCCCCCcchHhHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHHHhhccC--CC
Q 026406 87 ILGGMAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESL-MSPEVDYTVAITVFWAIEAVYQESFAHCLE--PD 163 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~~~~~~gi~~~~~~~~pa~~aY~~~l~~~-~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~--~~ 163 (239)
+...++.+.+|+++|+++++.+||+.++.+++|+|.+|++||+++ + ..++++++++|++||+|+|.+||+++.. ..
T Consensus 78 l~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~p~~~aY~~~l~~~~~-~~~~~~~~~aAl~pc~~~Y~~i~~~l~~~~~~ 156 (221)
T 2f2g_A 78 VLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRANQEYGRFLEDLMS-SEVKYPVIMTAFWAIEAVYQESFAHCLEDGNK 156 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHHHHHHTTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhcCCCHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 998886788899999999999999987789999999999999998 6 5679999999999999999999998754 32
Q ss_pred CCCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 164 TNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+ +++|.+||+.|++++|.+.|+.+++++|++++..++ ++++++.++|+++|++|++||||+|++
T Consensus 157 ~--~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2f2g_A 157 T--PVELTGACHRWGNDGFKQYCSSVKNIAERCLENASG---------EVLGEAEDVLVRVLELEVAFWEMSRGG 220 (221)
T ss_dssp S--SSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCH---------HHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred C--CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 247999999999999999999999999999988887 889999999999999999999999975
No 8
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=100.00 E-value=2.5e-52 Score=351.19 Aligned_cols=204 Identities=25% Similarity=0.388 Sum_probs=189.4
Q ss_pred hHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhH---HHHHHHH
Q 026406 14 VIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGD---TEVILGG 90 (239)
Q Consensus 14 ~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~---~~~l~~~ 90 (239)
|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .++ ++.+...
T Consensus 2 f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~l~~~ 76 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPD-----DLLPFFAESIYYI 76 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG-----GGHHHHHHHHHHH
T ss_pred hHHHHHHcCHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999 677 8999888
Q ss_pred HhhHHHHHHHHHHHHHHcCCCCCCCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026406 91 MAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 91 ~~~i~~E~~~h~~~~~~~gi~~~~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
++.+ |+++|+ ++.+||+. +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++..... ++++|
T Consensus 77 ~~~i--E~~lh~--~~~~Gi~~-~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~i~~~l~~~~~-~~~~y 149 (220)
T 1rtw_A 77 SKEL--EMFEKK--AQELGISL-NGEIDWRAKSYVNYLLSVA-SLGSFLEGFTALYCEEKAYYEAWKWVRENLK-ERSPY 149 (220)
T ss_dssp HHHH--HHHHHH--HHHTTCCS-SSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCTT
T ss_pred HHHH--HHHHHH--HHHCCCCC-CCCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchH
Confidence 8877 999999 89999998 7889999999999999994 6779999999999999999999998865422 23689
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 171 QEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 171 ~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
.+||+.|+|++|.+.|+.+++++|++++..++ +++++++++|+++|++|++||||+|+.
T Consensus 150 ~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 208 (220)
T 1rtw_A 150 QEFINHWSSQEFGEYVKRIEKILNSLAEKHGE---------FEKERAREVFKEVSKFELIFWDIAYGG 208 (220)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999988887 889999999999999999999999864
No 9
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=100.00 E-value=2.5e-52 Score=351.39 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=191.1
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHH
Q 026406 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
-..+.+++|+..++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+..
T Consensus 7 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~l~~ 81 (221)
T 2gm8_A 7 HHHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPS-----VDLMKTALE 81 (221)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----HHHHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999 788999999
Q ss_pred HHhh-HHHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-
Q 026406 90 GMAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT- 164 (239)
Q Consensus 90 ~~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~- 164 (239)
.+++ +.+|+++|+++++.+||+.+ +.+|+|+|.+||+||++++ ..++++++++|++||+|+|.+||+++.....
T Consensus 82 ~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~ 160 (221)
T 2gm8_A 82 LAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTC-ALEGFYQCMAALLPCFWSYAEIAERHGGKLRE 160 (221)
T ss_dssp HHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 8876 67899999999999999864 5789999999999999994 6779999999999999999999998865422
Q ss_pred CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
..+++|.+||+.|++++|.+.|+.+++++|++ + ++++++.++|+++|++|++||||||++
T Consensus 161 ~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2gm8_A 161 NPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----G---------LSAEELWPYFKEASLYELEFWQAAYEG 220 (221)
T ss_dssp CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----S---------CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----h---------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 13478999999999999999999999999987 3 466789999999999999999999975
No 10
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-51 Score=385.11 Aligned_cols=215 Identities=18% Similarity=0.255 Sum_probs=197.9
Q ss_pred cCCCchHHHHHH--HcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHH
Q 026406 9 AGKGGVIDTWLR--KHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEV 86 (239)
Q Consensus 9 ~~~~~~~~~L~~--~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~ 86 (239)
.+.++|++.|++ +++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..
T Consensus 327 ~~~~~f~~~L~~~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~-----~~~~~~ 401 (550)
T 3rm5_A 327 IPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPC-----LEDMEK 401 (550)
T ss_dssp CCSSCHHHHHHHSTTTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHH
T ss_pred CCCchHHHHHHhCchhhHHHHHHhCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHH
Confidence 467889999999 9999999999999999999999999999999999999999999999999999999 788888
Q ss_pred HHHHHhhHHHHHHHHHH-HHHHcCC-CCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccC
Q 026406 87 ILGGMAGLHDEIAWFKK-EASKWGV-ELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLE 161 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~-~~~~~gi-~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~ 161 (239)
+...++.+.+|+++|++ +++.||| +.+ +.+++|+|++|++||++++ ..++++++++|++||+|+|.+||+++..
T Consensus 402 ~~~~~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a-~~g~~~~~~aAl~pC~~~Y~~ig~~l~~ 480 (550)
T 3rm5_A 402 ELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVS-RRGNWQELVASLTPCLMGYGEALTKMKG 480 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888899999999 7779999 653 5789999999999999995 6689999999999999999999999865
Q ss_pred CCC-CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 162 PDT-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 162 ~~~-~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
... ..+++|++||++|+|++|.++|+++++++|++++.+++ +++++|+++|+++|+||++||||||+-
T Consensus 481 ~~~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 549 (550)
T 3rm5_A 481 KVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPP---------EQLDTLVTIYAEVCELETNFWTAALEY 549 (550)
T ss_dssp CCCSCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCG---------GGHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 432 23569999999999999999999999999999988888 899999999999999999999999863
No 11
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=100.00 E-value=5.1e-52 Score=347.81 Aligned_cols=202 Identities=15% Similarity=0.157 Sum_probs=185.7
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|| + .+++..+...
T Consensus 4 ~M~f~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~~~~~ 77 (214)
T 2qzc_A 4 IVGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-P-----IDKVTKILNL 77 (214)
T ss_dssp CCHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-C-----HHHHHHHHHH
T ss_pred ccHHHHHHHHhhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999 8 7889999998
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026406 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
++. +.+|+++|+++++.+||+.+ +.+++|+|.+|++||++++ .. +++++++|++||+|+|.+||+++.+. .
T Consensus 78 ~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~-~~~~~~aAl~pc~~~Y~~ig~~l~~~---~ 152 (214)
T 2qzc_A 78 VFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYA-NL-DWNKFLVAWTPCMFGYSIVGDYVIDS---P 152 (214)
T ss_dssp HTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HH-CHHHHHHHHHHHHHHHHHHHHHHTTC---S
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hc-CHHHHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 876 78899999999999999864 5789999999999999995 56 99999999999999999999998654 3
Q ss_pred CchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+++|++||+.|++++|.+.|+++++++|++ + ++++ +.++|+++|++|++|||++|+.
T Consensus 153 ~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~-~~~~f~~a~~~E~~Fwd~a~~~ 209 (214)
T 2qzc_A 153 NEVYKTWASFYASTEYKKRIEAILYALDEV-----S---------ITED-LLNIFINSVRFEIGFWDASLRK 209 (214)
T ss_dssp CHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----C---------CCHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----c---------cHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999987 3 4667 9999999999999999999864
No 12
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=100.00 E-value=1.2e-51 Score=348.29 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=188.0
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
-|+|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+ + .+++..+...
T Consensus 2 ~M~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~l~~~ 75 (226)
T 1udd_A 2 RVMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-E-----YPLMAELIEL 75 (226)
T ss_dssp CCCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-C-----TTHHHHHHHH
T ss_pred CCcHHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999 8 5778999988
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-C
Q 026406 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT-N 165 (239)
Q Consensus 91 ~~~-i~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~-~ 165 (239)
++. +.+|+++|+++++.+||+.+ +.+|+|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .
T Consensus 76 ~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~~ 154 (226)
T 1udd_A 76 ARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA-YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDN 154 (226)
T ss_dssp HHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHTHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 876 67899999999999999864 5789999999999999994 6779999999999999999999998764311 1
Q ss_pred CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
++++|.+||+.|+|++|.+.|+.+++++|++ +. ++++++.++|+++|++|++|||++|+.
T Consensus 155 ~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~----~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 214 (226)
T 1udd_A 155 PIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GH---------SGYDRLRRIFITGSKFELAFWEMAWRG 214 (226)
T ss_dssp SCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CS---------SCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHhCCHHHHHHHHHHHHHHHhC----ch---------hHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3478999999999999999999999999987 31 144689999999999999999999864
No 13
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=100.00 E-value=1.7e-49 Score=326.91 Aligned_cols=190 Identities=20% Similarity=0.311 Sum_probs=167.0
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
++.++++|++.++|+|+++++||| |||+++|++||+|||+||.+|+|+++++++|||+ .+ +..+...
T Consensus 1 ~~~~~~~L~~~~~~~w~~~~~HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~-----~~-~~~~~~~ 67 (190)
T 1wwm_A 1 MGMLGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQ-----AH-RAPLVQA 67 (190)
T ss_dssp ----------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCH-----HH-HHHHHHH
T ss_pred CchHHHHHHHhHHHHHHHHHCCCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCh-----HH-HHHHHHH
Confidence 356899999999999999999999 9999999999999999999999999999999998 77 8999888
Q ss_pred HhhHHHHHHHHHHHHHHcCCCCCCCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026406 91 MAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 91 ~~~i~~E~~~h~~~~~~~gi~~~~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
++.+.+| +++++.+||+. +.+++|+|++||+||++++ . ++++++++|++||+|+|.+||+++.. ++++|
T Consensus 68 ~~~~~~E----~~~~~~~gi~~-~~~~~p~~~aY~~~l~~~a-~-~~~~~~~aAl~pc~~~Y~~ig~~l~~----~~~~y 136 (190)
T 1wwm_A 68 LMATVEE----LDWLLLQGASP-SAPVHPVRAGYIALLEEMG-R-LPYAYRVVFFYFLNGLFLEAWAHHVP----EEGPW 136 (190)
T ss_dssp HHHHHHH----HHHHHTTTCCS-SSCCCHHHHHHHHHHHHHH-H-SCHHHHHHHHHHHHHHHHHHHHHHSC----SSSHH
T ss_pred HHHHHHH----HHHHHHcCCCC-CCCCCHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHHHHHHHhcc----CCcHH
Confidence 8777666 67889999997 7889999999999999995 5 89999999999999999999999865 23689
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhh
Q 026406 171 QEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 171 ~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
++||++|+|++|.+.|+++++++|++++..++ ++ ++++|+++|++|++||||||
T Consensus 137 ~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~---~~~~F~~a~~lE~~Fwd~a~ 190 (190)
T 1wwm_A 137 AELSQHWFAPEFQAVLYDLEVLARGLWEDLDP---------EV---VRTYLRRILEAEKATWSLLL 190 (190)
T ss_dssp HHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCH---------HH---HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHHhCCH---------HH---HHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999887776 44 99999999999999999986
No 14
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=100.00 E-value=5.2e-49 Score=338.15 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=181.6
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|++.|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|||+ + ++..+...+
T Consensus 48 ~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~-~-----~~~~~~~~~ 121 (258)
T 2a2m_A 48 DSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD-E-----TLREFFKAK 121 (258)
T ss_dssp TSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-H-----HHHHHHHHH
T ss_pred chHHHHHHHhhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-H-----HHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999998 3 477777777
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCC-CCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026406 92 AGLHDEIAWFKKEASKWGVELSE-TVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~gi~~~~-~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
+.+.+ ++|+++++.+||+.+. .+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .+++|
T Consensus 122 ~~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a-~~g~~~~~laAl~pC~~~Y~eig~~l~~~~~-~~~~Y 197 (258)
T 2a2m_A 122 AKSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVA-GSLASPYMCVVMLPCEYLWPWIANFLDGYTP-TNSLY 197 (258)
T ss_dssp HHHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHH-HHSCTHHHHHHHHHHHHHHHHHHHHHGGGSC-TTSTT
T ss_pred HHHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchH
Confidence 66555 9999999999999765 688999999999999995 6678999999999999999999999866432 33789
Q ss_pred HHHhh-hcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 171 QEVCQ-RWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 171 ~~Wi~-~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
++||+ .|+++ +.|+++++++|++++..+ +++++++|+++|++|++||||+|+.
T Consensus 198 ~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~------------~~~l~~~F~~a~~lE~~Fwd~a~~~ 251 (258)
T 2a2m_A 198 RFWIEWNGGTP---NGAYQMGNMLEQYRDKID------------EDKAVEIFNTAMNYELKVFTSSTIL 251 (258)
T ss_dssp HHHHHHHCSCC---HHHHHHHHHHHTTGGGSC------------HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhccCCH---HHHHHHHHHHHHHHhhcc------------HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999 99998 899999999999875332 4589999999999999999999975
No 15
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.3e-43 Score=302.16 Aligned_cols=220 Identities=10% Similarity=0.064 Sum_probs=182.7
Q ss_pred CccchhhcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCC-
Q 026406 2 EGKAKEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDS- 80 (239)
Q Consensus 2 ~~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~- 80 (239)
.|...+++..++|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++....+
T Consensus 9 ~~~~~~~~~~p~~se~L~~~~~~iw~~i~~HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~ 88 (262)
T 3oql_A 9 TGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGE 88 (262)
T ss_dssp CSCTTCGGGSCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHH
T ss_pred CCccccccCCcHHHHHHHHHhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCCh
Confidence 3667788999999999999999999999999999999999999999999999999999999999999999998732210
Q ss_pred hhHHHHHHHHHhhHHHHH---HHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH
Q 026406 81 EGDTEVILGGMAGLHDEI---AWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQE 154 (239)
Q Consensus 81 ~~~~~~l~~~~~~i~~E~---~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~ 154 (239)
...+.++. .++..|. ++|+++|+.+||+.+ +.+++|+|.+||+||++++ ..++++++++|+. .|+|.+
T Consensus 89 ~~~~~~l~---~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a-~~g~l~e~lAAl~--ya~e~~ 162 (262)
T 3oql_A 89 DMARRWLM---RNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTS-SSDSLAVAMAATN--YAIEGA 162 (262)
T ss_dssp HHHHHHHH---HHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHH-HHSCHHHHHHHTT--THHHHH
T ss_pred HHHHHHHH---HHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHH-ccCCHHHHHHHHH--HHHHHH
Confidence 12233332 3444444 555688999999974 5789999999999999994 6789999999987 789999
Q ss_pred HHh---------hccCCCCCC-CchHHHHhhhcCChHHHHH-HHHHHHHHHHHHhhc-ChhhhccccchHHHHHHHHHHH
Q 026406 155 SFA---------HCLEPDTNT-PPELQEVCQRWGNDGFGQY-CHSLKKIANRLLEKA-SDDLIMGKAGDDVLKKAEVELI 222 (239)
Q Consensus 155 i~~---------~~~~~~~~~-~~~y~~Wi~~y~s~~f~~~-v~~~~~~ld~~~~~~-~~~~~~~~~~~~~~~~~~~~F~ 222 (239)
||+ ......+.+ ++.|.+||+.|+ +|... +.+..+++|+++... ++ +++++++++|+
T Consensus 163 ig~~s~~~~~g~~~~~~~~~~~~~~~~~w~~~h~--~~D~~H~~e~~~li~~l~~~~~~~---------~e~~~~~~a~~ 231 (262)
T 3oql_A 163 TGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHA--QYDDAHPWEALEIICTLVGNKPSL---------QLQAELRQAVT 231 (262)
T ss_dssp HHHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHHH--TCC-CHHHHHHHHHHHHHCSSCCH---------HHHHHHHHHHH
T ss_pred hhhHHHHhhhhHHHhcCCCcccChHHHHHHHHHH--HHHHHhHHHHHHHHHHHhccCCCH---------HHHHHHHHHHH
Confidence 997 433322221 346899999998 78777 999999999999766 66 89999999999
Q ss_pred HHHHHHHHhchhhhcC
Q 026406 223 RVLEHEVEFWNMSRGT 238 (239)
Q Consensus 223 ~~~~~E~~Fwd~a~~~ 238 (239)
+++.+|+.||||||+.
T Consensus 232 ~S~~~~~~fld~~y~~ 247 (262)
T 3oql_A 232 KSYDYMYLFLERCIQL 247 (262)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999863
No 16
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=100.00 E-value=1.4e-35 Score=250.04 Aligned_cols=203 Identities=11% Similarity=0.102 Sum_probs=169.9
Q ss_pred CCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHH
Q 026406 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.|+|+++|++..+ |+.+++|||+++|.+|+||++.|++||+|||+||.+|.++++.+++|+|+ .+.+..+...
T Consensus 5 ~m~f~~~L~~~~~--~~~~~~HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~-----~~~~~~~~~~ 77 (231)
T 1rcw_A 5 FMNFLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDD-----LEARKLLLDN 77 (231)
T ss_dssp --CHHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HhhcccCHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHH
Confidence 4679999999988 89999999999999999999999999999999999999999999999999 6667777655
Q ss_pred HhhH----HHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026406 91 MAGL----HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 91 ~~~i----~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
+... ..|+++|.++++.+|++.+ +.++.|+|++|++|+.+++ ..+++.+++++++++++++..+.+....
T Consensus 78 i~~e~~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~-~~~~~~~~laal~~~E~~~~~~~~~~~~-- 154 (231)
T 1rcw_A 78 LMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWC-TGDSLAAGVAALYSYESQIPRIAREKIR-- 154 (231)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTHHHHHHHHHH--
T ss_pred HHHhcCCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 5332 3579999999999999963 5678999999999999994 6778999999987777777777654321
Q ss_pred CCCCchHHHHhhhcCChHH-------HHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhh
Q 026406 164 TNTPPELQEVCQRWGNDGF-------GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f-------~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
..++|.+|++.|+++.| ...+..+.+++|+++. + +++++.++|++++++|+.|||++|
T Consensus 155 --~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~---~----------~~~~~~~~~~~~~~le~~fwd~~~ 219 (231)
T 1rcw_A 155 --GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK---D----------DADKVLEASQEVTQSLYGFLDSFL 219 (231)
T ss_dssp --HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS---S----------CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH---H----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11245589999999999 6677899999999874 2 345799999999999999999998
Q ss_pred cC
Q 026406 237 GT 238 (239)
Q Consensus 237 ~~ 238 (239)
..
T Consensus 220 ~~ 221 (231)
T 1rcw_A 220 DP 221 (231)
T ss_dssp --
T ss_pred hc
Confidence 64
No 17
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.97 E-value=1.2e-31 Score=227.59 Aligned_cols=206 Identities=11% Similarity=0.106 Sum_probs=169.8
Q ss_pred CchH--HHHHHHcHHHHHHhhhC-HHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChh--HHHH
Q 026406 12 GGVI--DTWLRKHRLIYIGATRH-PFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEG--DTEV 86 (239)
Q Consensus 12 ~~~~--~~L~~~~~~~w~~~~~H-pFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~--~~~~ 86 (239)
|+|+ ++|+++++|+|+++++| |||++|.+||||.+.|++||+|||+||.+|+|+++.+++|+|+ .+ .+..
T Consensus 2 ~~~~~~~~L~~~~~~~w~~~~~h~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~-----~~~~~~~~ 76 (239)
T 3dde_A 2 MSIIDLTKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKD-----LPGKYLSF 76 (239)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSS-----CCHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----chHHHHHH
Confidence 3454 99999999999999999 9999999999999999999999999999999999999999999 44 5667
Q ss_pred HHHHHhhH-HHHHHHHHHHHHHcCCCCC---CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCC
Q 026406 87 ILGGMAGL-HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEP 162 (239)
Q Consensus 87 l~~~~~~i-~~E~~~h~~~~~~~gi~~~---~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~ 162 (239)
+...+... ..|..++++ ++.+|++.+ +.+|+|+|.+|++||+.++ ..+++..+++++++||++| .++..++..
T Consensus 77 ~~~~~~~e~~~e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a-~~~~~~~~la~~~~~E~~y-~~~~~~~~~ 153 (239)
T 3dde_A 77 CFHHAHEEAGHELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWIS-ATGNPVQRLGYSYWAENVY-GYIDPVLKA 153 (239)
T ss_dssp HHHHHHHHTTTHHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HSSCGGGGHHHHHHHHTCH-HHHHHHHHH
T ss_pred HHHHHHHHHChHHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 77666443 456565666 899999964 5788999999999999995 5678889999999999999 677654321
Q ss_pred ---CCCCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhc
Q 026406 163 ---DTNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 163 ---~~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~ 237 (239)
.-.-++....|+..|+..+- ..++.++++||+++ .++ ++++++.+..+.++++...||++.+.
T Consensus 154 l~~~~~l~~~~~~f~~~h~~~d~-~h~~~~~~~ld~~~--~~~---------~~~~~ii~~a~~~~~l~~~~f~~l~~ 219 (239)
T 3dde_A 154 IQSTLDLTPQSMKFFIAHSKIDA-KHAEEVNEMLHEVC--KTQ---------EDVDSVVAVMENSLVLTARILDDVWK 219 (239)
T ss_dssp HHHHTTCCGGGGHHHHHHHHHHH-HHHHHHHHHHHHHC--CSH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCHHHHHHHHHHHhcch-hHHHHHHHHHHHHc--CCH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122335799999987765 44578999999986 466 78899999999999999999998763
No 18
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=99.96 E-value=3.1e-29 Score=214.30 Aligned_cols=201 Identities=9% Similarity=0.045 Sum_probs=161.3
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
+.|+++|++..++.|. +|||+++|.+|+||+++|++|++|||+|+.+|+++++.+++|||| .+.++.++..+
T Consensus 10 ~~F~~~Lr~~~~~~~~---~HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d-----~e~rr~l~~ni 81 (258)
T 3hlx_A 10 QAFEEALRAKGDFYHI---HHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPD-----AQTRRKWVQRI 81 (258)
T ss_dssp HHHHHHHHHGGGGSGG---GSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHc---CChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----HHHHHHHHHHH
Confidence 5699999999999885 999999999999999999999999999999999999999999999 77888888766
Q ss_pred hhHH------HHHHHHHHHHHHcCCCCC---CCC-cchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccC
Q 026406 92 AGLH------DEIAWFKKEASKWGVELS---ETV-PQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLE 161 (239)
Q Consensus 92 ~~i~------~E~~~h~~~~~~~gi~~~---~~~-~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~ 161 (239)
.... +|+++|.++++.+|++.+ +.+ +.|+|+.|++++.+.+ ..++++++++|+++|. .-..|.+....
T Consensus 82 ~~eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a-~~~s~~e~vAA~L~E~-~~p~i~~~r~~ 159 (258)
T 3hlx_A 82 LDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFA-RRACWQEAACSSLTEL-FAPQIHQSRLD 159 (258)
T ss_dssp HHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHH-HHSCHHHHHHGGGGGG-THHHHHHHHHH
T ss_pred HHHhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH-HHHHHHHHHhh
Confidence 4333 688999999999999974 556 6999998877777773 5678999999987533 22333333211
Q ss_pred CCCCCCchHHHHhhhcCChHHHHHHHHH-------HHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchh
Q 026406 162 PDTNTPPELQEVCQRWGNDGFGQYCHSL-------KKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNM 234 (239)
Q Consensus 162 ~~~~~~~~y~~Wi~~y~s~~f~~~v~~~-------~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~ 234 (239)
.-++|..||+.++-+.|...+.+. .+++-+. ..++ ++++++.+++..+|+.++.|||+
T Consensus 160 ----~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~--~~t~---------e~q~~a~~a~~~~~~~lw~~lDa 224 (258)
T 3hlx_A 160 ----SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAY--CDSA---------EKQNRMLEILQFKLDILWSMLDA 224 (258)
T ss_dssp ----HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHH--CCSH---------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHH--cCCH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 113577899999888887776444 4443222 1366 89999999999999999999999
Q ss_pred hhc
Q 026406 235 SRG 237 (239)
Q Consensus 235 a~~ 237 (239)
+|.
T Consensus 225 ~~~ 227 (258)
T 3hlx_A 225 MTM 227 (258)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 19
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=99.89 E-value=4.7e-23 Score=182.54 Aligned_cols=202 Identities=10% Similarity=0.105 Sum_probs=154.9
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|++.|++...+ +...+|||++++.+|+|+++.|+.|++|||.|+..|++.++.+++|+++ .+.+..+...+
T Consensus 108 ~~F~~~L~~~~~~--~~~~~HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~-----~~~r~~l~e~i 180 (332)
T 3bjd_A 108 EDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTD-----VDEAAALARYL 180 (332)
T ss_dssp HHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCS-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh--cccccCcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHH
Confidence 4589999998888 7789999999999999999999999999999999999999999999999 56566666533
Q ss_pred ----hhHHHH---HHHHHHHHHHcCCCCC--CCCcchHhHHHHHHHHHhcCCCccHHHHHHHHH----HHHHHHHHHHhh
Q 026406 92 ----AGLHDE---IAWFKKEASKWGVELS--ETVPQKANQVYCRFLESLMSPEVDYTVAITVFW----AIEAVYQESFAH 158 (239)
Q Consensus 92 ----~~i~~E---~~~h~~~~~~~gi~~~--~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~----~c~~~Y~~i~~~ 158 (239)
+....| .++|.++++.+|++.+ ..++.|++..|++|+..++ ..+++.++++++. +|.|+|..+++.
T Consensus 181 ~DE~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~-~~~~~~~alaal~~~E~~~p~~y~~i~~~ 259 (332)
T 3bjd_A 181 YGELGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAF-RHAEVGWGLAVFYITELVVPGNHEKLYRA 259 (332)
T ss_dssp HHHTTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHH-HCSSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 222334 8999999999999974 4566899999999999984 5678888888887 999999999988
Q ss_pred ccCCCC-C-CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhh
Q 026406 159 CLEPDT-N-TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 159 ~~~~~~-~-~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
+.+.+. + ..+.|..||+.-....+..+ ..+++++. ++ +....+..+-...++.++.|||..+
T Consensus 260 l~~~g~~~~~~~yf~~HI~lD~~H~~~~~----~~ll~~~~---~~---------~~q~~~~~a~~~~l~~~~~f~D~l~ 323 (332)
T 3bjd_A 260 LLQAGLSEDQAEYYKVHISLVPPRAKREW----QLIARRIP---DV---------QFQNAFLTSLSQHFRVERAYYDAIW 323 (332)
T ss_dssp HHHTTCCTTTTHHHHHHHHHCC---CTTH----HHHHTTTT---CH---------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcccchHHHHHHHHhHHHHHHHH----HHHHHhCC---CH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765332 2 22577899998654332222 23555542 22 3334566666666799999999987
Q ss_pred c
Q 026406 237 G 237 (239)
Q Consensus 237 ~ 237 (239)
.
T Consensus 324 ~ 324 (332)
T 3bjd_A 324 E 324 (332)
T ss_dssp H
T ss_pred H
Confidence 4
No 20
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=99.33 E-value=3.4e-11 Score=100.28 Aligned_cols=182 Identities=14% Similarity=0.169 Sum_probs=126.6
Q ss_pred HhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCC----CCCChhHHHHHHHHHhhHHHH------
Q 026406 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKE----SDDSEGDTEVILGGMAGLHDE------ 97 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~----~~~~~~~~~~l~~~~~~i~~E------ 97 (239)
++.+|||++.+++|+ .+..+.|++|-+.| +|.++-++++|++. +. ...+..+. .++.+|
T Consensus 23 ~~~~hP~l~~~~~a~--~~ql~~f~~Q~s~F----~ryL~~l~~~~~~~l~~~~~--~~~~~eL~---~NL~EE~G~~d~ 91 (244)
T 3b5o_A 23 SITENPVVQMLSQAS--FAQIAYVMQQYSIF----PKELVGFTELARRKALGAGW--NGVAQELQ---ENIDEEMGSTTG 91 (244)
T ss_dssp CTTTCTTGGGTTTCC--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTTC--HHHHHHHH---HHHHHHTTTTTT
T ss_pred hhccCHHHHHHHhcc--HHHHHHHHHHHHHH----HHHHHHHHhhcccccccccc--hHHHHHHH---HHHHHHhCCCCC
Confidence 467899999999866 55589999999966 77777777776651 00 01133333 344444
Q ss_pred ----HHHHHHHHH-HcCCCCCCCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHH------H-HHHHHHhhccCCCCC
Q 026406 98 ----IAWFKKEAS-KWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIE------A-VYQESFAHCLEPDTN 165 (239)
Q Consensus 98 ----~~~h~~~~~-~~gi~~~~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~------~-~Y~~i~~~~~~~~~~ 165 (239)
-.+++++++ .+|++++..+|.|+|+++++-|.+++ ..++..+|.|+.+.| | +|..+.+.+... .
T Consensus 92 ~~~H~~lyRr~L~~~lGld~~~~~p~~sT~~~idt~~~lc--s~d~~~aLGA~yatE~iaipe~~ly~~li~gL~~~--~ 167 (244)
T 3b5o_A 92 GISHYTLLADGLEEGLGVAVKNTMPSVATSKLLRTVLSLF--DRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEG--A 167 (244)
T ss_dssp TCCHHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--C
T ss_pred CCchHHHHHHHHHHhcCCCccccCCCchHHHHHHHHHHHh--CCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhC--C
Confidence 579999999 99999988899999999999999996 456677777664433 2 688888877442 2
Q ss_pred CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhh
Q 026406 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
-++.-..+++.|....=....+.+.++++... ++ +++.++.+-+++++.....||+.-+
T Consensus 168 ~~~~~l~FF~~HidelE~~Ha~~l~~~l~~~~---~~---------eef~~~~~G~~~~Lda~~~fWdgL~ 226 (244)
T 3b5o_A 168 IPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYI---QP---------EEFGEFAAGFRAMIDAMQVWWQELA 226 (244)
T ss_dssp CCHHHHHHHHHHHC-------CHHHHHHHTTC---CG---------GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hh---------HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334567777754222455566777777543 33 4578999999999999999999754
No 21
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=98.09 E-value=0.00016 Score=61.48 Aligned_cols=115 Identities=12% Similarity=0.036 Sum_probs=78.3
Q ss_pred hhcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHH
Q 026406 7 EDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEV 86 (239)
Q Consensus 7 ~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~ 86 (239)
.+....+|+++|....+..=+.+.++||+..+.+|+++.+.|+.||.|=|.+....-.++...... |. .... .
T Consensus 26 ~~~~~~~~~~~Lr~~T~~~H~~~e~~~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~LE~~l~~~~~~-p~-----l~~~-~ 98 (264)
T 2q32_A 26 NQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH-PA-----FAPL-Y 98 (264)
T ss_dssp ---CTTSHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTC-TT-----TGGG-C
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccC-hH-----hHhh-c
Confidence 344556899999999998888999999999999999999999999999999998877766653321 11 1000 0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHc-CCCC-CCCCcchHhHHHHHHHHHhc
Q 026406 87 ILGGMAGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 87 l~~~~~~i~~E~~~h~~~~~~~-gi~~-~~~~~~pa~~aY~~~l~~~~ 132 (239)
+. ..+.+ ....++-++.+ |-++ +..+|+|++..|+.++..++
T Consensus 99 ~~---~el~R-~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 142 (264)
T 2q32_A 99 FP---MELHR-KEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIG 142 (264)
T ss_dssp CH---HHHCC-HHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHH
T ss_pred CH---hhhhh-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 00 00111 12222333333 6554 35778999999999999874
No 22
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=98.04 E-value=0.00017 Score=59.35 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=98.6
Q ss_pred hcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHH
Q 026406 8 DAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVI 87 (239)
Q Consensus 8 ~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l 87 (239)
+++..+|+++|....+..=+.+-++|||..+..|.++.+.++.||.|=|.+....-.++...... |.....-..+.
T Consensus 2 ~~~~~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~-p~~~~~~~~el--- 77 (215)
T 1wzd_A 2 TTATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRAS-GFAESLLDPAL--- 77 (215)
T ss_dssp -----CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSTTTSCGGG---
T ss_pred CCccHHHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccC-chhhhhccchh---
Confidence 34556899999999999888899999999999999999999999999999999887777664321 21100000000
Q ss_pred HHHHhhHHHHHHHHHHHHHHcCCCC---CCCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHH----HHHHHHHHhhcc
Q 026406 88 LGGMAGLHDEIAWFKKEASKWGVEL---SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAI----EAVYQESFAHCL 160 (239)
Q Consensus 88 ~~~~~~i~~E~~~h~~~~~~~gi~~---~~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c----~~~Y~~i~~~~~ 160 (239)
.+ ...-++-++.+|.+. +..+|+|++..|++++..++ ...+....++.++.- .-+-+-|++.+.
T Consensus 78 -------~R-~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~-~~~~p~~~lg~~Yv~YeG~~~GGq~i~~~~~ 148 (215)
T 1wzd_A 78 -------NR-AEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIR-DNVDGPALVAHHYVRYLGDLSGGQVIARMMQ 148 (215)
T ss_dssp -------CC-HHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------cc-HHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 00 112222233344333 24678999999999999874 222022233322221 111112222221
Q ss_pred CCCCCCCchHHHHhhhcCChHHHHHHHHHHHHHHHH
Q 026406 161 EPDTNTPPELQEVCQRWGNDGFGQYCHSLKKIANRL 196 (239)
Q Consensus 161 ~~~~~~~~~y~~Wi~~y~s~~f~~~v~~~~~~ld~~ 196 (239)
+..+.+ +.=..++..+..++=....+..++.||++
T Consensus 149 ~~l~l~-~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~ 183 (215)
T 1wzd_A 149 RHYGVD-PEALGFYHFEGIAKLKVYKDEYREKLNNL 183 (215)
T ss_dssp HHHCCC-GGGCGGGCCTTCSCHHHHHHHHHHHHHTC
T ss_pred HhcCcC-cccceeeecCCcCCHHHHHHHHHHHHhcC
Confidence 110111 11123455555333456667788888876
No 23
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=98.00 E-value=0.00023 Score=60.06 Aligned_cols=171 Identities=12% Similarity=0.048 Sum_probs=98.4
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|+++|....+..=+.+-++|||..+..|.++.+.++.||.|=|.+....-.++..... + .....+..
T Consensus 2 ~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~---~------p~l~~~~~-- 70 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQHRD---N------EIISAIYF-- 70 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---S------HHHHHHCC--
T ss_pred chHHHHHHHHHHHHHHHHHchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc---C------hhhhhhcc--
Confidence 468999999999888888899999999999999999999999999988866665554321 1 11111100
Q ss_pred hhHHHHHHHHHHHHHHc-CCCC-CCCCcchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHH----HHHHHHhhccCCCCC
Q 026406 92 AGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEA----VYQESFAHCLEPDTN 165 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~-gi~~-~~~~~~pa~~aY~~~l~~~~~~~~~~~~~l~a~~~c~~----~Y~~i~~~~~~~~~~ 165 (239)
..+.+ ....++-++.+ |-+. +..+|+|++..|+.++..++.... ..+++.++.-+. +-+-|.+.+.+....
T Consensus 71 ~el~R-~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P--~~llgh~Yv~y~g~lsGGq~i~~~l~k~l~L 147 (250)
T 1wov_A 71 PELNR-TDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEP--ELLIAHCYTRYLGDLSGGQSLKNIIRSALQL 147 (250)
T ss_dssp GGGCC-HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHHTTHHHHHHHHHHHHTTC
T ss_pred Hhhhh-HHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCH--HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCC
Confidence 01111 11222223333 5543 256889999999999998742222 223333333221 111122222111111
Q ss_pred CCchHHHHhhhcCCh---HHHHHHHHHHHHHHHH
Q 026406 166 TPPELQEVCQRWGND---GFGQYCHSLKKIANRL 196 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~---~f~~~v~~~~~~ld~~ 196 (239)
+.+.=..++..+..+ +=..+.+..++.||++
T Consensus 148 ~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l 181 (250)
T 1wov_A 148 PEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSL 181 (250)
T ss_dssp CTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHS
T ss_pred CCcccceeeccCCccccccHHHHHHHHHHHHhcC
Confidence 101112344555533 4455677788888886
No 24
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=97.79 E-value=0.00098 Score=55.82 Aligned_cols=109 Identities=15% Similarity=0.104 Sum_probs=74.5
Q ss_pred CchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 026406 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|+++|....+..=+.+-+.||++.+..|.++.+.++.||.|=|.+....-.++...... |. ...+..
T Consensus 3 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~~-p~--------l~~~~~-- 71 (240)
T 1we1_A 3 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDH-PI--------LSHIYF-- 71 (240)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTS-TT--------GGGGCC--
T ss_pred hHHHHHHHHHHHHHHHHHHCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccC-ch--------hHhhhh--
Confidence 4699999999998888888999999999999999999999999999988776666654221 11 000000
Q ss_pred hhHHHHHHHHHHHHHHc-CCCC-CCCCcchHhHHHHHHHHHhc
Q 026406 92 AGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 92 ~~i~~E~~~h~~~~~~~-gi~~-~~~~~~pa~~aY~~~l~~~~ 132 (239)
..+.+ ....++-++.+ |-+. +..+|+|++..|+.++..++
T Consensus 72 ~el~R-~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~ 113 (240)
T 1we1_A 72 PELNR-KQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVA 113 (240)
T ss_dssp TTSCC-HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHH
T ss_pred Hhhhh-HHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHh
Confidence 00111 11112222233 5543 24678999999999999874
No 25
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=97.77 E-value=0.0015 Score=54.48 Aligned_cols=112 Identities=14% Similarity=0.076 Sum_probs=76.4
Q ss_pred CCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHH
Q 026406 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
+..+|+++|.......=+.+-+.||+..+.+|+++.+.++.||.|=|.+....-.++..... -|. ... .+..
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~-~p~-----~~~--~~~~ 80 (233)
T 1n45_A 9 MPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKE-SPV-----FAP--VYFP 80 (233)
T ss_dssp -CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-STT-----TGG--GCCH
T ss_pred CChHHHHHHHHHHHHHHHHHHccHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc-Cch-----hhh--hcCH
Confidence 44579999999999888888999999999999999999999999999999887776665432 111 000 0000
Q ss_pred HHhhHHHHHHHHHHHHHHcCC-CC-CCCCcchHhHHHHHHHHHhc
Q 026406 90 GMAGLHDEIAWFKKEASKWGV-EL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 90 ~~~~i~~E~~~h~~~~~~~gi-~~-~~~~~~pa~~aY~~~l~~~~ 132 (239)
..+.+ ....++-++.+|- +. +..+|+|++..|+.++..++
T Consensus 81 --~el~R-~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~ 122 (233)
T 1n45_A 81 --EELHR-KAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVG 122 (233)
T ss_dssp --HHHCC-HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred --hhccc-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 00111 1222233333433 33 25788999999999999874
No 26
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=97.67 E-value=0.0018 Score=55.04 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=77.0
Q ss_pred cCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHH
Q 026406 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
.+..+|+++|.......=+.+-+.||+..+.+|+++.+.|+.||.|=|.+....-.++..... -|. ...+ .+-
T Consensus 8 ~~~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~-~p~-----l~~~-~~p 80 (267)
T 1j02_A 8 SMSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQ-NPV-----YAPL-YFP 80 (267)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTT-----TGGG-CCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-CcH-----HHHh-cCH
Confidence 345579999999998888888899999999999999999999999999999887666665322 111 1110 000
Q ss_pred HHHhhHHHHHHHHHHHHHHc-CCCC-CCCCcchHhHHHHHHHHHhc
Q 026406 89 GGMAGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 89 ~~~~~i~~E~~~h~~~~~~~-gi~~-~~~~~~pa~~aY~~~l~~~~ 132 (239)
. .+.+ ....++-++.+ |-+. +..++.|++..|+.++..++
T Consensus 81 e---el~R-~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 122 (267)
T 1j02_A 81 E---ELHR-RAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVG 122 (267)
T ss_dssp H---HHCC-HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred h---hhhh-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 0 1111 12222333333 6654 36788999999999999874
No 27
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=87.11 E-value=1.6 Score=35.16 Aligned_cols=60 Identities=7% Similarity=0.017 Sum_probs=47.0
Q ss_pred hhhcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHH
Q 026406 6 KEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAAS 68 (239)
Q Consensus 6 ~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~ 68 (239)
..+...++|++.|.+..+..=+.+-++ |+. ..|.++.+.++.||.|-|.+.......+..
T Consensus 3 ~~~~~~~~l~~~Lr~~T~~~H~~~E~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~ 62 (209)
T 1j77_A 3 ETENQALTFAKRLKADTTAVHDSVDNL-VMS--VQPFVSKENYIKFLKLQSVFHKAVDHIYKD 62 (209)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHH-HHH--TCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CccCCCccHHHHHHHHHHHHHHHHHHh-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 335557789999999888877777777 776 789999999999999999998877666543
No 28
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=86.04 E-value=2.2 Score=34.10 Aligned_cols=62 Identities=8% Similarity=0.055 Sum_probs=46.6
Q ss_pred cchhhcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHH
Q 026406 4 KAKEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAAS 68 (239)
Q Consensus 4 ~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~ 68 (239)
-+-+....++|++.|.+..+..=+.+-++ |+. ..|.++.+.++.||.|-|.+.......+..
T Consensus 4 ~~~~~~~~~~l~~~Lr~~T~~~H~~~e~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~ 65 (198)
T 1sk7_A 4 LAPESTRQNLRSQRLNLLTNEPHQRLESL-VKS--KEPFASRDNFARFVAAQYLFQHDLEPLYRN 65 (198)
T ss_dssp --------CCHHHHHHHHTHHHHHHHHHH-HHH--HCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHH-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455567789999999988887888887 764 789999999999999999999887776643
No 29
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=59.19 E-value=43 Score=27.67 Aligned_cols=90 Identities=16% Similarity=-0.022 Sum_probs=60.7
Q ss_pred HhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHhh-HH---HHHHHHHH
Q 026406 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGMAG-LH---DEIAWFKK 103 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-i~---~E~~~h~~ 103 (239)
...=||=.-+|.+-+||.+.+.--+.-..+|+..|.|...--.-..+. .+....+..-++. +. -..+-.+.
T Consensus 148 ~~MMh~sFagLId~~l~~e~~~~i~~Ah~Lfl~~FsrtINp~~Rg~~~-----~Ev~~sf~~p~~Aai~S~F~~~~qR~~ 222 (253)
T 4h5l_A 148 RAMMHPSFAGIIDLDLPNGAGATIADAHGLFMIEFSKTINPSLRTKQA-----NEVAATFEKPNMAAMSGRFFTREDKKK 222 (253)
T ss_dssp GGGSSGGGGGGCCTTCGGGHHHHHHHHHHHHHHHHHHHHCGGGSSSCH-----HHHHHHHHHHHHHHHTCSSSCHHHHHH
T ss_pred HHHHhhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCHhhcCCCH-----HHHHHHhhHHHHHHHHcCCCCHHHHHH
Confidence 344589999999999999999999999999999998877654332222 2334444433221 11 12336677
Q ss_pred HHHHcCCCCCCCCcchHhH
Q 026406 104 EASKWGVELSETVPQKANQ 122 (239)
Q Consensus 104 ~~~~~gi~~~~~~~~pa~~ 122 (239)
+++.+||=..+.+++++..
T Consensus 223 ~L~~~gi~~~n~~~~~~v~ 241 (253)
T 4h5l_A 223 LLIAVGIIDEDLVLASAVV 241 (253)
T ss_dssp HHHHTTSBCTTCCBCHHHH
T ss_pred HHHHcCccCCCCCCcHHHH
Confidence 9999998766666655543
No 30
>3ov9_A Nucleoprotein; orthogonal bundle, viral genomic encapsidation, viral protein; 1.60A {Rift valley fever virus} PDB: 3ouo_A 3lyf_A 4h5m_A 4h5o_A 4h5p_A 4h5q_A 4h6f_A 4h6g_A
Probab=55.56 E-value=56 Score=26.82 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=60.1
Q ss_pred HHhhhCHHHHhhhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHhh-H---HHHHHHHH
Q 026406 27 IGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLIKAWKESDDSEGDTEVILGGMAG-L---HDEIAWFK 102 (239)
Q Consensus 27 ~~~~~HpFv~~l~~GtL~~e~F~~YL~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-i---~~E~~~h~ 102 (239)
-...=||=.-+|.+-+||.+.++--+.-..+|+..|.|...--.-..+. .+....+..-++. + --+-+-.+
T Consensus 141 Pr~MMh~sFagLId~~l~~e~~~~i~dAh~Lf~~~FS~tINp~~Rg~s~-----~ev~~sf~~pm~Aa~~s~f~~~eqR~ 215 (245)
T 3ov9_A 141 PRHMMHPSFAGMVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTK-----EEVAATFTQPMNAAVNSNFISHEKRR 215 (245)
T ss_dssp CGGGSSGGGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCH-----HHHHHHHHHHHHHHHTCSSSCHHHHH
T ss_pred CHHHhhchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhcCHhhccCCH-----HHHHHHHHhHHHHHHHccCCCHHHHH
Confidence 3456689999999999999999999999999999998776522211111 1223333321111 1 11455677
Q ss_pred HHHHHcCCCCCCCCcchHhH
Q 026406 103 KEASKWGVELSETVPQKANQ 122 (239)
Q Consensus 103 ~~~~~~gi~~~~~~~~pa~~ 122 (239)
.++..+||=..+..|+++..
T Consensus 216 ~~L~~~gil~~n~~~~~~v~ 235 (245)
T 3ov9_A 216 EFLKAFGLVDSNGKPSAAVM 235 (245)
T ss_dssp HHHHHTTSBCTTSCBCHHHH
T ss_pred HHHHHhCccCCCCCCcHHHH
Confidence 89999999776667766443
No 31
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=49.42 E-value=31 Score=27.43 Aligned_cols=49 Identities=8% Similarity=0.178 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHHHHHHHhchhhhcC
Q 026406 183 GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 183 ~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
..++.-+..++-+..++...++ ++.++|..++.++|.+.+.+|..+|..
T Consensus 143 ia~i~~i~~~i~~~l~~~~~~~-------~~~~~~~~A~~K~~~l~val~~~~Y~~ 191 (195)
T 2veb_A 143 VAFIYPITATMKPFLARKGHTP-------EEVEKMYQAWFKATTLQVALWSYPYVK 191 (195)
T ss_dssp HHTHHHHHHTTHHHHTSSSCCH-------HHHHHHHHHHHHHHHHHHHHHTGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCH-------HHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 4455556666666655443221 788899999999999999999999863
No 32
>1dvk_A PRP18; PRE-mRNA splicing factor, X-RAY crystallography, RNA binding protein; 2.15A {Saccharomyces cerevisiae} SCOP: a.72.1.1
Probab=44.58 E-value=23 Score=27.66 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=36.4
Q ss_pred HHHHhhhcCCCCHHHHH------HHHHhHHHHHHHHHHHHHHHhhcccC
Q 026406 33 PFILAIRDGTVNYSSFK------KWLGQDYIFVREFVAFAASVLIKAWK 75 (239)
Q Consensus 33 pFv~~l~~GtL~~e~F~------~YL~QD~~Yl~~~~r~~a~~~~ka~~ 75 (239)
|-++.|.+++||.+.+. +++.||.-|+...-..+.+++.+||=
T Consensus 67 PL~~~Lr~~~L~~dil~~L~~Iv~~~q~~r~y~~And~Yl~LaIGNA~W 115 (173)
T 1dvk_A 67 PLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAW 115 (173)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHHTBCCC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCCC
Confidence 88999999999988765 45555689999999999999999974
No 33
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=37.83 E-value=13 Score=19.48 Aligned_cols=9 Identities=33% Similarity=0.630 Sum_probs=6.5
Q ss_pred HHHHHhHHH
Q 026406 49 KKWLGQDYI 57 (239)
Q Consensus 49 ~~YL~QD~~ 57 (239)
..||+|||.
T Consensus 4 at~LIqdyf 12 (26)
T 2f3y_B 4 ATFLIQEYF 12 (26)
T ss_pred hhhhHHHHH
Confidence 468888874
No 34
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=37.78 E-value=17 Score=20.71 Aligned_cols=15 Identities=33% Similarity=0.607 Sum_probs=9.7
Q ss_pred CCHHHH-HHHHHhHHH
Q 026406 43 VNYSSF-KKWLGQDYI 57 (239)
Q Consensus 43 L~~e~F-~~YL~QD~~ 57 (239)
+..-.| ..||||||.
T Consensus 6 vTVGKfYatfLIQdyF 21 (37)
T 2be6_D 6 VTVGKFYATFLIQEYF 21 (37)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHH
Confidence 333344 489999974
No 35
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=26.94 E-value=68 Score=22.02 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=26.3
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHhh-cChhhhccccchHHHHHHHHHHHHHHH
Q 026406 174 CQRWGNDGFGQYCHSLKKIANRLLEK-ASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 174 i~~y~s~~f~~~v~~~~~~ld~~~~~-~~~~~~~~~~~~~~~~~~~~~F~~~~~ 226 (239)
|..|+-.+|-++|..+.+. - . .++ ++...+...|.+.+.
T Consensus 7 i~DYTE~EFl~fv~~i~~~---~--~~~~e---------~~~d~lv~hF~~ite 46 (87)
T 1unk_A 7 ISDYTEAEFVQLLKEIEKE---N--VAATD---------DVLDVLLEHFVKITE 46 (87)
T ss_dssp GGGSCHHHHHHHHHHHHHH---H--HSSCC---------HHHHHHHHHHHHHHC
T ss_pred hhhcCHHHHHHHHHHHHhC---C--CCCCh---------hHHHHHHHHHHHhcC
Confidence 6778888887777776544 1 1 233 455788888988765
No 36
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=23.57 E-value=82 Score=18.07 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=19.9
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHh
Q 026406 175 QRWGNDGFGQYCHSLKKIANRLLE 198 (239)
Q Consensus 175 ~~y~s~~f~~~v~~~~~~ld~~~~ 198 (239)
....|++|..++++--++++|+..
T Consensus 8 ~I~~S~~F~~F~~rsskviERAL~ 31 (38)
T 3l9k_W 8 MIILSENFQRFVVRAGRVIERALS 31 (38)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHc
Confidence 345789999999999999998753
No 37
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=23.23 E-value=99 Score=21.47 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=23.2
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHhhcChhhhccccchHHHHHHHHHHHHHH
Q 026406 174 CQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVL 225 (239)
Q Consensus 174 i~~y~s~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~ 225 (239)
|+.|+-.+|-++|+.+.+ +...++ ++...+...|.+.+
T Consensus 7 i~DyTe~Efi~lv~~I~~-----~~~~~E---------~e~d~ll~~fe~it 44 (94)
T 3u43_A 7 ISDYTEAEFLEFVKKICR-----AEGATE---------EDDNKLVREFERLT 44 (94)
T ss_dssp GGGSBHHHHHHHHHHHHH-----TCCSSH---------HHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHh-----cCCCCH---------HHHHHHHHHHHHhC
Confidence 566776666666655543 111244 66777888887776
No 38
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=22.18 E-value=1.7e+02 Score=20.25 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=41.8
Q ss_pred CCccchhhcCCCchHHHHHHHcHHHHHHhhhCHHHHhhhcC---CCCHHHHHHHHHhHHHHHHHHH
Q 026406 1 MEGKAKEDAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDG---TVNYSSFKKWLGQDYIFVREFV 63 (239)
Q Consensus 1 ~~~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~G---tL~~e~F~~YL~QD~~Yl~~~~ 63 (239)
||+.......-+. ...+-.+.+.+.+.+++||=|+...+- .|+.+.+...+.-=|-|+...-
T Consensus 1 Me~i~~~l~~~~~-~~~~~~~~~~~~~~vl~dP~V~~Fl~~h~~~l~~~~I~~s~~kL~ey~~e~~ 65 (106)
T 2k7r_A 1 MEPIGRSLQGVTG-RPDFQKRLEQMKEKVMKDQDVQAFLKENEEVIDQKMIEKSLNKLYEYIEQSK 65 (106)
T ss_dssp CCCTTCSCCCCSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHSTTTCCHHHHHHTHHHHHHHHHSCS
T ss_pred CccHHHHHHHHHh-cccHHHHHHHHHHHHHcCHHHHHHHHHChhhCCHHHHHhhHHHHHHHHHHHH
Confidence 6666555444211 112334446788999999999997642 6999999998887777776543
Done!