Your job contains 1 sequence.
>026407
MAVTGVSGNSLFYRVVVSQSYPTKLVKFASVPLELQQLPRKPLCCSCDDSSSSLSSFTAL
STETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELRE
ETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLG
DGSEKPEFNEWRWMFPEQVLERVRKPCGLIFRYFSPFCLAPFMIYLKELFHFCLIFSKP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026407
(239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2164220 - symbol:NUDX27 "AT5G06340" species:37... 603 9.3e-59 1
TAIR|locus:2075840 - symbol:NUDX26 "AT3G10620" species:37... 566 7.8e-55 1
TAIR|locus:2202487 - symbol:NUDX25 "AT1G30110" species:37... 412 1.6e-38 1
TIGR_CMR|SPO_3585 - symbol:SPO_3585 "hydrolase, NUDIX fam... 282 9.7e-25 1
UNIPROTKB|Q47Y27 - symbol:rppH "RNA pyrophosphohydrolase"... 249 3.0e-21 1
TIGR_CMR|CPS_3625 - symbol:CPS_3625 "(di)nucleoside polyp... 249 3.0e-21 1
TIGR_CMR|CJE_0684 - symbol:CJE_0684 "(di)nucleoside polyp... 239 3.5e-20 1
TIGR_CMR|CBU_1551 - symbol:CBU_1551 "MutT/nudix family pr... 237 5.7e-20 1
UNIPROTKB|Q9KU53 - symbol:rppH "RNA pyrophosphohydrolase"... 225 1.1e-18 1
TIGR_CMR|VC_0671 - symbol:VC_0671 "MutT/nudix family prot... 225 1.1e-18 1
UNIPROTKB|P0A776 - symbol:rppH species:83333 "Escherichia... 219 4.6e-18 1
TIGR_CMR|SO_1331 - symbol:SO_1331 "MutT/nudix family prot... 211 3.2e-17 1
DICTYBASE|DDB_G0286883 - symbol:DDB_G0286883 "dinucleosid... 149 1.2e-10 1
DICTYBASE|DDB_G0290689 - symbol:DDB_G0290689 "dinucleosid... 109 0.00017 1
>TAIR|locus:2164220 [details] [associations]
symbol:NUDX27 "AT5G06340" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034432 "bis(5'-adenosyl)-pentaphosphatase activity"
evidence=IDA] [GO:0019243 "methylglyoxal catabolic process to
D-lactate" evidence=RCA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AB006700 GO:GO:0034432 HOGENOM:HOG000066722
InterPro:IPR022927 EMBL:AF372941 EMBL:AY113163 IPI:IPI00534536
RefSeq:NP_196252.1 UniGene:At.7280 ProteinModelPortal:Q9FNH4
SMR:Q9FNH4 STRING:Q9FNH4 EnsemblPlants:AT5G06340.1 GeneID:830522
KEGG:ath:AT5G06340 TAIR:At5g06340 InParanoid:Q9FNH4 OMA:GKVWVGR
PhylomeDB:Q9FNH4 ProtClustDB:CLSN2916502 Genevestigator:Q9FNH4
Uniprot:Q9FNH4
Length = 227
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 113/163 (69%), Positives = 132/163 (80%)
Query: 59 ALSTETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALREL 118
A + E+PP GYR+NVGICL+ S +KIF A++IHIP TWQMPQGGADEGEDL NAA REL
Sbjct: 52 ARTVESPPVGYRKNVGICLV-SPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFREL 110
Query: 119 REETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINL 178
REETGVTSAEF+AE P WLTYDFP +VK KLNR+W T+YKGQAQKWFLFKFTGKEEEINL
Sbjct: 111 REETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINL 170
Query: 179 LGDGSEKPEFNEWRWMFPEQVLERV---RKPC-GLIFRYFSPF 217
LGDG+ KPEF W WM PEQV+E ++P + + F+P+
Sbjct: 171 LGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPY 213
>TAIR|locus:2075840 [details] [associations]
symbol:NUDX26 "AT3G10620" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0034432 "bis(5'-adenosyl)-pentaphosphatase
activity" evidence=IDA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AC011560 EMBL:AC013428 GO:GO:0004081
GO:GO:0034432 HOGENOM:HOG000066722 InterPro:IPR022927 EMBL:AF370187
EMBL:AY059145 IPI:IPI00542208 RefSeq:NP_187673.1 UniGene:At.19953
UniGene:At.69665 ProteinModelPortal:Q9CAF2 SMR:Q9CAF2 STRING:Q9CAF2
PaxDb:Q9CAF2 PRIDE:Q9CAF2 EnsemblPlants:AT3G10620.1 GeneID:820231
KEGG:ath:AT3G10620 TAIR:At3g10620 InParanoid:Q9CAF2 OMA:PEHVQIL
PhylomeDB:Q9CAF2 ProtClustDB:CLSN2913371 ArrayExpress:Q9CAF2
Genevestigator:Q9CAF2 Uniprot:Q9CAF2
Length = 216
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 111/191 (58%), Positives = 138/191 (72%)
Query: 19 QSYPTKLVKFASVPLELQQLPRKPXXXXXXXXXXXXXXFTALSTETPPDGYRRNVGICLI 78
++YP+K +KF+S+P L + RK S E+PP+GYRRNVG+CL+
Sbjct: 22 RNYPSKPIKFSSLPF-LHRC-RKSRVSSSSAR-------CCSSMESPPEGYRRNVGVCLM 72
Query: 79 NSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLT 138
NSSKK IF A+R+ IP WQMPQGG DEGED A +REL+EETGV SAE LAE P+W+T
Sbjct: 73 NSSKK-IFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWIT 131
Query: 139 YDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQ 198
YDFP V++KL RWG+++KGQAQKWFL KFTGK+EEINLLGDG+EKPEF EW W P+Q
Sbjct: 132 YDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQ 191
Query: 199 VLERV---RKP 206
V+E +KP
Sbjct: 192 VVENAVEFKKP 202
>TAIR|locus:2202487 [details] [associations]
symbol:NUDX25 "AT1G30110" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS;IDA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015967 "diadenosine tetraphosphate
catabolic process" evidence=IDA] [GO:0006857 "oligopeptide
transport" evidence=RCA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0004081 GO:GO:0015967 EMBL:AC074176
EMBL:AY087445 EMBL:BT025530 EMBL:AK229734 IPI:IPI00540816
PIR:B86425 RefSeq:NP_001185114.1 RefSeq:NP_174303.1
UniGene:At.43787 HSSP:P08337 ProteinModelPortal:Q9C6Z2 SMR:Q9C6Z2
PaxDb:Q9C6Z2 PRIDE:Q9C6Z2 EnsemblPlants:AT1G30110.1
EnsemblPlants:AT1G30110.2 GeneID:839890 KEGG:ath:AT1G30110
TAIR:At1g30110 HOGENOM:HOG000066722 InParanoid:Q9C6Z2 OMA:GNSEYDG
PhylomeDB:Q9C6Z2 ProtClustDB:CLSN2682056 Genevestigator:Q9C6Z2
InterPro:IPR022927 Uniprot:Q9C6Z2
Length = 175
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 77/142 (54%), Positives = 102/142 (71%)
Query: 63 ETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREET 122
E P GYR NVG+CLINS +F A+R+++P WQMPQGG ++GED +AA+REL+EET
Sbjct: 2 ENLPPGYRPNVGVCLINSDNL-VFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60
Query: 123 GVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEE--INLLG 180
GV SAE ++E P WLTYDFP VK K+NR WG + GQAQKW+L + E+E INL
Sbjct: 61 GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120
Query: 181 DGSEKPEFNEWRWMFPEQVLER 202
+ ++ EF EW+W PE+V+E+
Sbjct: 121 NEADS-EFAEWKWAKPEEVVEQ 141
>TIGR_CMR|SPO_3585 [details] [associations]
symbol:SPO_3585 "hydrolase, NUDIX family, NudH subfamily"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 HOGENOM:HOG000066722 OMA:GNSEYDG InterPro:IPR022927
KO:K08311 RefSeq:YP_168780.1 ProteinModelPortal:Q5LMH8
GeneID:3195400 KEGG:sil:SPO3585 PATRIC:23380647
ProtClustDB:CLSK759298 Uniprot:Q5LMH8
Length = 161
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 59/138 (42%), Positives = 84/138 (60%)
Query: 69 YRRNVGICLINSSKKKIFAATRI-HIPYTWQMPQGGADEGEDLINAALRELREETGVTS- 126
YR VG+ L+N +F R+ WQMPQGG DE ED AALREL EETGVT+
Sbjct: 11 YRPCVGVVLMNGDGF-VFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTAD 69
Query: 127 -AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEK 185
E +AET WL YD P + ++ W Y+GQ QKW+LF+F G++++I+L +
Sbjct: 70 LVEMVAETDGWLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQIDL---ETGH 123
Query: 186 PEFNEWRWMFPEQVLERV 203
PEF+ W+W P++++ +
Sbjct: 124 PEFSRWKWQDPDRLVAEI 141
>UNIPROTKB|Q47Y27 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0015961 "diadenosine
polyphosphate catabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 61/159 (38%), Positives = 85/159 (53%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
+GYR NVGI +IN + +F A R + ++WQ PQGG DEGE REL EE G+
Sbjct: 5 EGYRANVGIVIINDMGQ-VFWARR-YGQHSWQYPQGGVDEGETAEQTMYRELHEEVGLKP 62
Query: 127 --AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSE 184
+ +A T +WL Y P K+ + GQ QKWFL K T E ++LL S
Sbjct: 63 EHVKIVASTKHWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLLH--SS 117
Query: 185 KPEFNEWRWM---FP-EQVLERVRKPCGLIFRYFSPFCL 219
PEF++WRW+ +P QV+ R ++ + F+ F L
Sbjct: 118 HPEFDDWRWVSYWYPVRQVVSFKRDVYRMVMKEFANFAL 156
>TIGR_CMR|CPS_3625 [details] [associations]
symbol:CPS_3625 "(di)nucleoside polyphosphate hydrolase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0015961
"diadenosine polyphosphate catabolic process" evidence=ISS]
[GO:0016787 "hydrolase activity" evidence=ISS] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 61/159 (38%), Positives = 85/159 (53%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
+GYR NVGI +IN + +F A R + ++WQ PQGG DEGE REL EE G+
Sbjct: 5 EGYRANVGIVIINDMGQ-VFWARR-YGQHSWQYPQGGVDEGETAEQTMYRELHEEVGLKP 62
Query: 127 --AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSE 184
+ +A T +WL Y P K+ + GQ QKWFL K T E ++LL S
Sbjct: 63 EHVKIVASTKHWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLLH--SS 117
Query: 185 KPEFNEWRWM---FP-EQVLERVRKPCGLIFRYFSPFCL 219
PEF++WRW+ +P QV+ R ++ + F+ F L
Sbjct: 118 HPEFDDWRWVSYWYPVRQVVSFKRDVYRMVMKEFANFAL 156
>TIGR_CMR|CJE_0684 [details] [associations]
symbol:CJE_0684 "(di)nucleoside polyphosphate hydrolase"
species:195099 "Campylobacter jejuni RM1221" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000066722 InterPro:IPR022927 OMA:PEHVQIL
RefSeq:YP_178696.1 ProteinModelPortal:Q5HVI9 STRING:Q5HVI9
GeneID:3231994 KEGG:cjr:CJE0684 PATRIC:20043096 KO:K08311
ProtClustDB:PRK00714 BioCyc:CJEJ195099:GJC0-701-MONOMER
Uniprot:Q5HVI9
Length = 156
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/138 (39%), Positives = 81/138 (58%)
Query: 69 YRRNVGICLINSS---KKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVT 125
YR NV +++SS + KIF A R + WQ PQGG D+GE + NA REL+EE G
Sbjct: 7 YRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESVKNALFRELKEEIGTD 66
Query: 126 SAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEK 185
E +AE P WL+YDFP K+ +K+ Y GQ QK+FL + IN+ ++
Sbjct: 67 EVEIIAEYPEWLSYDFPSKIVKKMYP-----YDGQIQKYFLVRLK-HGATINI---NTKH 117
Query: 186 PEFNEWRWMFPEQVLERV 203
PEF++++++ +Q+ E +
Sbjct: 118 PEFDDYQFVSVKQIFEMI 135
>TIGR_CMR|CBU_1551 [details] [associations]
symbol:CBU_1551 "MutT/nudix family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
HOGENOM:HOG000066723 RefSeq:NP_820534.1 ProteinModelPortal:Q83BF8
GeneID:1209461 KEGG:cbu:CBU_1551 PATRIC:17931865
BioCyc:CBUR227377:GJ7S-1531-MONOMER Uniprot:Q83BF8
Length = 228
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 57/156 (36%), Positives = 87/156 (55%)
Query: 68 GYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSA 127
G+R VG+ ++N + ++ R+ P WQ PQGG E L A REL EE G++
Sbjct: 76 GFRLGVGMVIMNRQGELLWGR-RVGNPDAWQFPQGGLLPNETLREALNRELDEEVGLSPH 134
Query: 128 E--FLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEK 185
+ +L ET W++Y P K ++ +R G GQ QKWFL +FTGK++ I+L D +
Sbjct: 135 DVIYLRETRQWISYRLPKKFRRPEHR--GPVCIGQRQKWFLLQFTGKDDAISL--DHCSQ 190
Query: 186 PEFNEWRWM---FP-EQVLERVRKPCGLIFRYFSPF 217
PEF++WRW+ +P + V+E R + F+ F
Sbjct: 191 PEFDQWRWVDYWYPVDHVVEFKRDVYQKVLTEFAEF 226
>UNIPROTKB|Q9KU53 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0003824 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0494 GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927
OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714 PIR:G82294
RefSeq:NP_230320.1 ProteinModelPortal:Q9KU53 DNASU:2615460
GeneID:2615460 KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 53/132 (40%), Positives = 74/132 (56%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
DGYR NVGI + N+ + +F A R + ++WQ PQGG D+GE A REL EE G+T
Sbjct: 5 DGYRLNVGIVICNNHGQ-VFWAKR-YGQHSWQFPQGGIDDGESPEQAMFRELYEEVGLTK 62
Query: 127 AEF--LAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDG 182
+ +A + +WL Y P ++ RW + GQ QKWFL + E +IN+
Sbjct: 63 KDVKVIATSRHWLRYKLPKRLV-----RWDSQPVCIGQKQKWFLLRLECDESKINMQRGS 117
Query: 183 SEKPEFNEWRWM 194
S PEF+ WRW+
Sbjct: 118 S--PEFDGWRWV 127
>TIGR_CMR|VC_0671 [details] [associations]
symbol:VC_0671 "MutT/nudix family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 GO:GO:0003824
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0494
GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927 OMA:PEHVQIL
KO:K08311 ProtClustDB:PRK00714 PIR:G82294 RefSeq:NP_230320.1
ProteinModelPortal:Q9KU53 DNASU:2615460 GeneID:2615460
KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 53/132 (40%), Positives = 74/132 (56%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
DGYR NVGI + N+ + +F A R + ++WQ PQGG D+GE A REL EE G+T
Sbjct: 5 DGYRLNVGIVICNNHGQ-VFWAKR-YGQHSWQFPQGGIDDGESPEQAMFRELYEEVGLTK 62
Query: 127 AEF--LAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDG 182
+ +A + +WL Y P ++ RW + GQ QKWFL + E +IN+
Sbjct: 63 KDVKVIATSRHWLRYKLPKRLV-----RWDSQPVCIGQKQKWFLLRLECDESKINMQRGS 117
Query: 183 SEKPEFNEWRWM 194
S PEF+ WRW+
Sbjct: 118 S--PEFDGWRWV 127
>UNIPROTKB|P0A776 [details] [associations]
symbol:rppH species:83333 "Escherichia coli K-12"
[GO:0050779 "RNA destabilization" evidence=IMP] [GO:0034353 "RNA
pyrophosphohydrolase activity" evidence=IDA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0494 Gene3D:3.90.79.10
InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811 EMBL:U29581
GO:GO:0006402 InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 PIR:G65065
RefSeq:NP_417307.1 RefSeq:YP_491035.1 PDB:2KDV PDB:2KDW PDBsum:2KDV
PDBsum:2KDW ProteinModelPortal:P0A776 SMR:P0A776 DIP:DIP-47855N
IntAct:P0A776 PRIDE:P0A776 EnsemblBacteria:EBESCT00000000762
EnsemblBacteria:EBESCT00000018382 GeneID:12934210 GeneID:947300
KEGG:ecj:Y75_p2764 KEGG:eco:b2830 PATRIC:32121078 EchoBASE:EB2896
EcoGene:EG13091 BioCyc:EcoCyc:G7459-MONOMER
BioCyc:ECOL316407:JW2798-MONOMER BioCyc:MetaCyc:G7459-MONOMER
EvolutionaryTrace:P0A776 Genevestigator:P0A776 GO:GO:0034353
GO:GO:0050779 Uniprot:P0A776
Length = 176
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 53/132 (40%), Positives = 70/132 (53%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
DGYR NVGI + N + ++A R ++WQ PQGG + GE A REL EE G++
Sbjct: 5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSR 62
Query: 127 AE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDG 182
+ LA T WL Y P ++ RW T GQ QKWFL + + EIN+
Sbjct: 63 KDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLVSGDAEINM--QT 115
Query: 183 SEKPEFNEWRWM 194
S PEF+ WRW+
Sbjct: 116 SSTPEFDGWRWV 127
>TIGR_CMR|SO_1331 [details] [associations]
symbol:SO_1331 "MutT/nudix family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 RefSeq:NP_716951.1
ProteinModelPortal:Q8EH98 GeneID:1169152 KEGG:son:SO_1331
PATRIC:23522318 Uniprot:Q8EH98
Length = 174
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/130 (37%), Positives = 70/130 (53%)
Query: 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTS 126
DG+R NVGI + N + ++A R ++WQ PQGG D+GE A REL EE G+
Sbjct: 5 DGFRANVGIIICNRYGQVMWA--RRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGLRP 62
Query: 127 AEF--LAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSE 184
L T WL Y P ++ ++ ++ GQ QKWFL + ++ INL G
Sbjct: 63 EHVTVLTSTRSWLRYRLPKRLVRQDSKPVCI---GQKQKWFLLQLKSQDSAINLSSSGH- 118
Query: 185 KPEFNEWRWM 194
PEF++WRW+
Sbjct: 119 -PEFDDWRWV 127
>DICTYBASE|DDB_G0286883 [details] [associations]
symbol:DDB_G0286883 "dinucleoside polyphosphate
hydrolase" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0286883 eggNOG:COG0494 Gene3D:3.90.79.10
InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AAFI02000091 ProtClustDB:CLSZ2429647 RefSeq:XP_637504.1
ProteinModelPortal:Q54L59 EnsemblProtists:DDB0266799 GeneID:8625843
KEGG:ddi:DDB_G0286883 OMA:RINISDT Uniprot:Q54L59
Length = 190
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 69 YRRNVGICLINSSKKKIFAATRIHIPYT----WQMPQGGADEG--EDLINAALRELREET 122
YR VG + N + ++ R T WQ PQGG + G ED A LRE++EE
Sbjct: 6 YRSCVGALIFND-QGQVLVCKRASKKKTAVGKWQFPQGGVEAGRDEDYYVAVLREIKEEV 64
Query: 123 G--VTSAE--FLA--ETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEI 176
G VT + F++ E P Y++ + + + + + N+ GQ W LF F K+ I
Sbjct: 65 GLEVTDDKLRFVSKIEEPLSYLYEYKNSITKAIGKVF--NHNGQMIHWHLF-FLPKDL-I 120
Query: 177 NLLGDG-SEKPEFNEWRWMFPEQVLERVRKP 206
+L+ G EKPEF+E +W + L + +P
Sbjct: 121 SLIDLGFEEKPEFDECKWFNFDDFLNQEEQP 151
>DICTYBASE|DDB_G0290689 [details] [associations]
symbol:DDB_G0290689 "dinucleoside polyphosphate
hydrolase" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0290689 eggNOG:COG0494 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0016787 EMBL:AAFI02000166 RefSeq:XP_635597.1
ProteinModelPortal:Q54FR0 EnsemblProtists:DDB0266800 GeneID:8627778
KEGG:ddi:DDB_G0290689 OMA:VEKNEDY ProtClustDB:CLSZ2429647
Uniprot:Q54FR0
Length = 183
Score = 109 (43.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 69 YRRNVGICLINSSKKKIF---AATRIHIPYTWQMPQGGAD--EGEDLINAALRELREETG 123
YR VG + N + + + ++ + WQ PQGG + + ED A RE++EE G
Sbjct: 6 YRSCVGALIFNQNNQVLICKRSSKKKTAVGKWQFPQGGVEVEKNEDYYVAVQREIKEEVG 65
Query: 124 ----VTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKE-EEINL 178
+ + +++++ L+Y + K +R G + GQ W+LF + +NL
Sbjct: 66 LEPSIDTLKYVSKLQNPLSYIYEDSPK---SRSGG--HIGQMIHWYLFYLPNDLIKTVNL 120
Query: 179 LGDGSEKPEFNEWRWM-FPE 197
+ E+PEF E +W F E
Sbjct: 121 --NVEEEPEFEECKWFGFEE 138
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 239 225 0.00077 113 3 11 22 0.37 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 605 (64 KB)
Total size of DFA: 195 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.84u 0.10s 17.94t Elapsed: 00:00:01
Total cpu time: 17.84u 0.10s 17.94t Elapsed: 00:00:01
Start: Fri May 10 12:06:25 2013 End: Fri May 10 12:06:26 2013