Query 026407
Match_columns 239
No_of_seqs 233 out of 1730
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 12:53:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f3y_A Diadenosine 5',5'''-P1, 99.9 1.6E-24 5.6E-29 170.7 17.4 155 62-217 6-164 (165)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 1.4E-20 4.9E-25 147.6 14.8 130 72-219 5-143 (155)
3 2kdv_A RNA pyrophosphohydrolas 99.8 3.6E-20 1.2E-24 147.0 16.1 145 67-218 5-155 (164)
4 3i7u_A AP4A hydrolase; nudix p 99.8 2.1E-20 7E-25 143.7 13.8 113 70-206 4-116 (134)
5 1ktg_A Diadenosine tetraphosph 99.8 4.9E-19 1.7E-23 135.4 15.3 129 70-219 3-136 (138)
6 3son_A Hypothetical nudix hydr 99.8 1.3E-18 4.4E-23 135.1 15.3 135 71-221 6-144 (149)
7 3grn_A MUTT related protein; s 99.8 2.7E-18 9.3E-23 133.9 15.0 125 68-217 6-136 (153)
8 1vcd_A NDX1; nudix protein, di 99.8 4.5E-18 1.5E-22 128.0 15.1 120 71-217 3-123 (126)
9 1sjy_A MUTT/nudix family prote 99.8 2.8E-18 9.7E-23 134.2 14.1 114 69-203 12-131 (159)
10 2o1c_A DATP pyrophosphohydrola 99.8 8.4E-18 2.9E-22 129.8 16.5 132 71-215 10-146 (150)
11 3hhj_A Mutator MUTT protein; n 99.8 1.2E-18 4.3E-23 136.6 11.7 124 69-216 28-155 (158)
12 2pbt_A AP4A hydrolase; nudix p 99.8 3.1E-18 1.1E-22 130.1 13.5 121 70-214 4-125 (134)
13 3fcm_A Hydrolase, nudix family 99.8 3.9E-18 1.3E-22 139.0 14.2 140 67-220 42-186 (197)
14 3gg6_A Nudix motif 18, nucleos 99.8 8.3E-19 2.8E-23 137.2 9.7 128 69-220 19-149 (156)
15 3h95_A Nucleoside diphosphate- 99.8 2.7E-18 9.3E-23 140.2 13.1 116 69-203 25-141 (199)
16 3r03_A Nudix hydrolase; struct 99.8 2.7E-18 9.3E-23 132.1 11.9 123 69-217 7-135 (144)
17 2w4e_A MUTT/nudix family prote 99.8 3.8E-18 1.3E-22 132.3 12.6 111 70-203 5-118 (145)
18 2jvb_A Protein PSU1, mRNA-deca 99.8 6E-18 2E-22 130.7 12.6 111 71-203 5-115 (146)
19 3gwy_A Putative CTP pyrophosph 99.8 9.5E-18 3.2E-22 128.9 13.4 119 70-215 6-130 (140)
20 3cng_A Nudix hydrolase; struct 99.8 1.1E-17 3.8E-22 135.5 13.7 131 70-228 40-175 (189)
21 4dyw_A MUTT/nudix family prote 99.8 1E-17 3.5E-22 131.5 12.9 125 68-215 27-154 (157)
22 3ees_A Probable pyrophosphohyd 99.8 1.2E-17 4.2E-22 129.5 12.8 123 71-219 22-148 (153)
23 3id9_A MUTT/nudix family prote 99.7 1.2E-17 4.2E-22 132.5 12.8 118 69-206 22-139 (171)
24 3oga_A Nucleoside triphosphata 99.7 2.2E-17 7.7E-22 130.3 14.1 119 70-206 27-153 (165)
25 3exq_A Nudix family hydrolase; 99.7 8.9E-18 3.1E-22 132.4 10.8 125 69-216 9-136 (161)
26 2yvp_A NDX2, MUTT/nudix family 99.7 1E-17 3.4E-22 134.6 11.1 111 71-203 42-155 (182)
27 2azw_A MUTT/nudix family prote 99.7 2.9E-17 1E-21 126.8 13.1 126 69-214 17-143 (148)
28 2fkb_A Putative nudix hydrolas 99.7 5.1E-17 1.7E-21 130.0 14.9 110 69-203 36-150 (180)
29 1hzt_A Isopentenyl diphosphate 99.7 4.2E-17 1.4E-21 132.0 14.4 115 69-203 31-151 (190)
30 1rya_A GDP-mannose mannosyl hy 99.7 3.5E-17 1.2E-21 128.1 13.5 56 70-126 18-75 (160)
31 3f6a_A Hydrolase, nudix family 99.7 3.6E-17 1.2E-21 128.4 13.4 56 69-127 5-60 (159)
32 3eds_A MUTT/nudix family prote 99.7 3.2E-18 1.1E-22 133.8 7.1 114 69-203 20-136 (153)
33 3shd_A Phosphatase NUDJ; nudix 99.7 3.7E-17 1.2E-21 127.3 13.1 103 76-200 10-113 (153)
34 3q93_A 7,8-dihydro-8-oxoguanin 99.7 4.1E-17 1.4E-21 130.8 13.6 113 70-206 24-138 (176)
35 2b0v_A Nudix hydrolase; struct 99.7 3.4E-17 1.2E-21 127.2 12.7 122 76-220 13-139 (153)
36 1vk6_A NADH pyrophosphatase; 1 99.7 1.2E-17 4.3E-22 142.6 11.0 115 76-216 145-262 (269)
37 2rrk_A ORF135, CTP pyrophospho 99.7 8.6E-17 3E-21 122.9 13.4 117 72-214 10-130 (140)
38 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 4.6E-17 1.6E-21 124.8 11.8 107 70-200 9-119 (139)
39 1v8y_A ADP-ribose pyrophosphat 99.7 6.3E-17 2.2E-21 128.6 12.7 109 70-203 34-145 (170)
40 3i9x_A MUTT/nudix family prote 99.7 1.9E-17 6.6E-22 133.7 9.5 129 71-219 28-177 (187)
41 2fvv_A Diphosphoinositol polyp 99.7 1.9E-17 6.7E-22 134.9 9.5 62 67-128 37-99 (194)
42 1q27_A Putative nudix hydrolas 99.7 4.4E-17 1.5E-21 129.3 10.8 108 70-203 34-149 (171)
43 1g0s_A Hypothetical 23.7 kDa p 99.7 5.9E-17 2E-21 133.5 11.0 115 71-203 58-180 (209)
44 3o6z_A GDP-mannose pyrophospha 99.7 6.2E-17 2.1E-21 131.4 11.0 113 71-203 46-167 (191)
45 1k2e_A Nudix homolog; nudix/MU 99.7 7.7E-17 2.6E-21 126.3 10.6 53 72-127 3-55 (156)
46 3q1p_A Phosphohydrolase (MUTT/ 99.7 6E-17 2E-21 133.0 10.3 112 70-203 68-179 (205)
47 1nqz_A COA pyrophosphatase (MU 99.7 1.7E-16 5.8E-21 128.7 11.8 113 68-203 32-152 (194)
48 3fsp_A A/G-specific adenine gl 99.7 1.3E-16 4.6E-21 142.1 12.0 151 40-220 206-364 (369)
49 2a6t_A SPAC19A8.12; alpha/beta 99.7 5E-17 1.7E-21 139.1 8.9 112 71-203 102-213 (271)
50 2pqv_A MUTT/nudix family prote 99.7 9.7E-17 3.3E-21 125.1 9.4 113 69-203 18-130 (154)
51 2dsc_A ADP-sugar pyrophosphata 99.7 3.1E-16 1.1E-20 129.3 12.5 116 71-203 62-184 (212)
52 3fk9_A Mutator MUTT protein; s 99.7 3.6E-16 1.2E-20 126.6 11.9 122 71-214 5-127 (188)
53 1vhz_A ADP compounds hydrolase 99.7 1.4E-16 4.8E-21 130.2 9.3 110 71-204 50-162 (198)
54 3o8s_A Nudix hydrolase, ADP-ri 99.7 1.4E-16 4.9E-21 130.8 9.4 125 71-220 71-198 (206)
55 3q91_A Uridine diphosphate glu 99.7 1.5E-16 5E-21 132.0 9.4 118 70-204 36-190 (218)
56 2fb1_A Conserved hypothetical 99.7 5.1E-17 1.7E-21 135.5 6.6 127 69-217 12-146 (226)
57 1x51_A A/G-specific adenine DN 99.7 1.3E-15 4.5E-20 118.9 14.2 121 69-214 18-146 (155)
58 1mut_A MUTT, nucleoside tripho 99.7 3.3E-17 1.1E-21 123.5 4.8 114 74-213 8-125 (129)
59 2b06_A MUTT/nudix family prote 99.7 4.9E-16 1.7E-20 121.1 11.3 122 69-214 7-132 (155)
60 1mk1_A ADPR pyrophosphatase; n 99.7 2E-16 6.7E-21 130.0 9.4 112 71-203 44-159 (207)
61 3gz5_A MUTT/nudix family prote 99.6 4.7E-16 1.6E-20 130.8 10.4 126 71-218 23-160 (240)
62 3e57_A Uncharacterized protein 99.6 4E-16 1.4E-20 128.4 9.6 130 66-219 63-208 (211)
63 2qjo_A Bifunctional NMN adenyl 99.6 1.1E-15 3.8E-20 133.9 13.1 116 69-202 202-322 (341)
64 3f13_A Putative nudix hydrolas 99.6 1.5E-15 5.1E-20 120.3 12.1 55 72-129 17-71 (163)
65 3fjy_A Probable MUTT1 protein; 99.6 3E-15 1E-19 133.0 15.1 137 80-220 35-177 (364)
66 2qjt_B Nicotinamide-nucleotide 99.6 2.7E-15 9.4E-20 132.2 13.2 117 69-202 207-329 (352)
67 2fml_A MUTT/nudix family prote 99.6 1.5E-14 5.1E-19 123.8 12.1 108 70-200 39-155 (273)
68 2dho_A Isopentenyl-diphosphate 99.5 9.4E-14 3.2E-18 116.4 13.8 116 68-203 57-191 (235)
69 2pny_A Isopentenyl-diphosphate 99.5 1.1E-13 3.7E-18 116.7 12.6 116 68-203 68-202 (246)
70 1u20_A U8 snoRNA-binding prote 99.5 1.7E-14 5.7E-19 119.0 5.1 48 78-128 52-100 (212)
71 1q33_A Pyrophosphatase, ADP-ri 99.5 2.4E-13 8.3E-18 117.4 10.9 41 84-125 140-180 (292)
72 3qsj_A Nudix hydrolase; struct 99.4 9.6E-13 3.3E-17 109.9 12.6 58 69-126 7-91 (232)
73 3dup_A MUTT/nudix family prote 99.4 2.3E-12 7.8E-17 111.3 12.3 121 69-205 117-245 (300)
74 2xsq_A U8 snoRNA-decapping enz 99.3 1.6E-12 5.6E-17 107.5 6.6 101 84-200 66-171 (217)
75 3kvh_A Protein syndesmos; NUDT 99.0 1.3E-10 4.4E-15 93.2 3.2 56 67-124 18-84 (214)
76 3rh7_A Hypothetical oxidoreduc 99.0 1.8E-09 6.3E-14 94.1 10.7 117 72-228 185-305 (321)
77 3bho_A Cleavage and polyadenyl 99.0 1.1E-09 3.8E-14 88.6 7.9 55 68-124 56-112 (208)
No 1
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.93 E-value=1.6e-24 Score=170.67 Aligned_cols=155 Identities=68% Similarity=1.261 Sum_probs=118.0
Q ss_pred CCCCCCCceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecC
Q 026407 62 TETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDF 141 (239)
Q Consensus 62 ~~~~~~~~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 141 (239)
|...+..++..|++++++.++ ++||++|...+|.|++|||++|+|||+++||+||++||||+++..+......+..+.+
T Consensus 6 ~~~~~~~~~~~v~~~i~~~~~-~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 84 (165)
T 1f3y_A 6 MDSPPEGYRRNVGICLMNNDK-KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDF 84 (165)
T ss_dssp CSSCCSSCCCEEEEEEECTTS-CEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCC
T ss_pred ccCCccceeeeEEEEEECCCC-cEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeec
Confidence 444556688999999998887 8999999865699999999999999999999999999999998666555555566777
Q ss_pred chhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh---cchHH-HHHHHhhhh
Q 026407 142 PLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV---RKPCG-LIFRYFSPF 217 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~---~~~~~-~~~~~l~~~ 217 (239)
++.....+...|...+.++...+|++.+......+...++..+.+|+.+++|++++++.++. ..+.+ ++++.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~~ 164 (165)
T 1f3y_A 85 PPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPH 164 (165)
T ss_dssp CHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGGG
T ss_pred CccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhhc
Confidence 77655445555555556667788888887654444443333456689999999999999987 44666 777766654
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.85 E-value=1.4e-20 Score=147.59 Aligned_cols=130 Identities=18% Similarity=0.274 Sum_probs=84.8
Q ss_pred eEEEEEEe--------CCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCch
Q 026407 72 NVGICLIN--------SSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPL 143 (239)
Q Consensus 72 ~v~v~i~~--------~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 143 (239)
+++++++. .++.++||++|...++.|.||||++|+|||+.+||+||++||||+++..............+..
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 84 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeecCC
Confidence 56777763 3444899999987779999999999999999999999999999999743322111111111111
Q ss_pred hhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhc
Q 026407 144 KVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCL 219 (239)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~ 219 (239)
........+|++........+ ..++|+.+++|++++|+.+++..+-. .++.....++.
T Consensus 85 ------------~~~~~~~~~~~~~~~~~~~~~------~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~ 143 (155)
T 3u53_A 85 ------------RNKPKTVIYWLAEVKDYDVEI------RLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLC 143 (155)
T ss_dssp ------------TTEEEEEEEEEEEESCTTCCC------CCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred ------------CcceeEEEEEEEEEeccCCcc------CCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 001122344454444332222 23458999999999999998755544 56666555554
No 3
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.85 E-value=3.6e-20 Score=146.98 Aligned_cols=145 Identities=36% Similarity=0.658 Sum_probs=102.7
Q ss_pred CCceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccc--eeeeccCceeeecCchh
Q 026407 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSA--EFLAETPYWLTYDFPLK 144 (239)
Q Consensus 67 ~~~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~~~~~~~~~~~~~~ 144 (239)
..++.+|++++++.++ ++||++|.. +|.|.+|||++|+|||+++||.||++||||+++. .+++....++.|.+++.
T Consensus 5 ~~~~~~v~~~i~~~~~-~vLl~~r~~-~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~ 82 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQG-QVMWARRFG-QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKR 82 (164)
T ss_dssp SSEEEEEEEEEECTTS-EEEEEEETT-CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECCTT
T ss_pred CCCCcEEEEEEEccCC-EEEEEEEcC-CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecCcc
Confidence 3578889999998877 999999876 5899999999999999999999999999999874 33444444555666553
Q ss_pred hhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh---cchHH-HHHHHhhhhh
Q 026407 145 VKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV---RKPCG-LIFRYFSPFC 218 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~---~~~~~-~~~~~l~~~~ 218 (239)
.. .......+.++...+|++.+......+..+ ..+..|+.+++|++++++.+.+ .++++ .++..+...+
T Consensus 83 ~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~--~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~l 155 (164)
T 2kdv_A 83 LV---RWDTKPVCIGQKQKWFLLQLVSGDAEINMQ--TSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVV 155 (164)
T ss_dssp TC---CTTSSSCCCEEEEEEEEEEESSCGGGCCSC--SSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ee---eeccCcccccceeEEEEEEecCCccccccC--CCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 21 011122234456678888776554333332 2234589999999999987653 56777 7777776554
No 4
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.85 E-value=2.1e-20 Score=143.74 Aligned_cols=113 Identities=20% Similarity=0.307 Sum_probs=73.6
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhc
Q 026407 70 RRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKL 149 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
+.+++++|++. + +|||++|.. |.|.||||++|+|||+++||+||++||||+++..+..... ..+.++..
T Consensus 4 ~~aag~vv~~~-~-~vLL~~r~~--g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~--~~~~~~~~----- 72 (134)
T 3i7u_A 4 EFSAGGVLFKD-G-EVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGE--IHYWYTLK----- 72 (134)
T ss_dssp EEEEEEEEEET-T-EEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEE--EEEEEEET-----
T ss_pred EEEEEEEEEEC-C-EEEEEEeCC--CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeee--eeEEecCC-----
Confidence 34666677764 5 899998865 8999999999999999999999999999998743221111 11111110
Q ss_pred ccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcch
Q 026407 150 NRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKP 206 (239)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 206 (239)
+.......++|++..... .. ...+|+.+++|++++++.+++..+
T Consensus 73 -----~~~~~~~~~~f~~~~~~~--~~------~~~~E~~~~~W~~~~e~~~~l~~~ 116 (134)
T 3i7u_A 73 -----GERIFKTVKYYLMKYKEG--EP------RPSWEVKDAKFFPIKEAKKLLKYK 116 (134)
T ss_dssp -----TEEEEEEEEEEEEEEEEE--CC------CCCTTSSEEEEEEHHHHHHHBCSH
T ss_pred -----CceEEEEEEEEEEEEcCC--cC------cCChhheEEEEEEHHHHhhhcCCh
Confidence 000111234455444322 11 223588999999999999987433
No 5
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.82 E-value=4.9e-19 Score=135.40 Aligned_cols=129 Identities=25% Similarity=0.389 Sum_probs=84.8
Q ss_pred eeeEEEEEEeCC--CCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeec--cCceeeecCchhh
Q 026407 70 RRNVGICLINSS--KKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAE--TPYWLTYDFPLKV 145 (239)
Q Consensus 70 ~~~v~v~i~~~~--~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~--~~~~~~~~~~~~~ 145 (239)
+.++++++++.+ +.++||++|...+|.|.||||++|+|||+++||+||++||||+.+..+... ......+.+++
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~-- 80 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKG-- 80 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETT--
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCC--
Confidence 356677777652 238999998765689999999999999999999999999999975333211 11122222211
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhc
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCL 219 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~ 219 (239)
......+|++..... . .....+|+.+++|++++++.++...+.. .++..+..+++
T Consensus 81 ------------~~~~~~~f~~~~~~~-~------~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 81 ------------KPKSVKYWLAKLNNP-D------DVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp ------------EEEEEEEEEEEECSC-C------CCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ------------CceEEEEEEEEecCC-c------ccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 112344555554432 1 1123458899999999999998755544 66666666553
No 6
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.80 E-value=1.3e-18 Score=135.10 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=84.6
Q ss_pred eeEEEEEE--eCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhh
Q 026407 71 RNVGICLI--NSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 71 ~~v~v~i~--~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (239)
.+|.++++ +.++.++||++|... |.|.||||++|+|||+++||+||++||||+++.......... +..+.
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~~-g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~--~~~~~----- 77 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTDA-DVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSH--ASIPN----- 77 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESSS-SCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEE--EEEEG-----
T ss_pred eEEEEEEEEecCCCeEEEEEEEcCC-CCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEee--ecccc-----
Confidence 34555554 233348999999874 999999999999999999999999999999874321111111 11111
Q ss_pred cccccC-CcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhcCC
Q 026407 149 LNRRWG-TNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCLAP 221 (239)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~~~ 221 (239)
..|. ........++|.+........+.. .+|+.+++|++++++.++...+.. .++..+..++...
T Consensus 78 --~~~~~~~~~~~~~~~f~~~~~~~~~~~~~------~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 78 --FHFSFNKPYVVPEYCFAIDLTSCSYQVTL------SLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp --GGTCSSSCSEEEEEEEEEECTTTGGGCCC------CTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred --eeeccCCceEeEEEEEEEEcCCCCCcccC------CCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 0010 000111233444444421222222 258899999999999998866666 7777777776654
No 7
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.79 E-value=2.7e-18 Score=133.92 Aligned_cols=125 Identities=19% Similarity=0.202 Sum_probs=83.9
Q ss_pred CceeeEEEEEEeCCCCEEEEEEecCC----CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCch
Q 026407 68 GYRRNVGICLINSSKKKIFAATRIHI----PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPL 143 (239)
Q Consensus 68 ~~~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 143 (239)
.++..|++++++.++ ++||++|... +|.|.||||++|.|||+++||+||++||||+++...... ....+.+++
T Consensus 6 ~~~~~v~~vi~~~~~-~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~--~~~~~~~~~ 82 (153)
T 3grn_A 6 PYIISVYALIRNEKG-EFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIA--GQVNFELTE 82 (153)
T ss_dssp CEEEEEEEEEECTTC-CEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEE--EEEEEECSS
T ss_pred ceEEEEEEEEEcCCC-cEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEE--EEEEEecCC
Confidence 366778888888777 8999888753 399999999999999999999999999999987432211 111222222
Q ss_pred hhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh-cchHH-HHHHHhhhh
Q 026407 144 KVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV-RKPCG-LIFRYFSPF 217 (239)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~-~~~~~-~~~~~l~~~ 217 (239)
.....++|.+....... ...+|..+++|++++++.++. ..+.. .+++.+...
T Consensus 83 ----------------~~~~~~~~~~~~~~~~~------~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~ 136 (153)
T 3grn_A 83 ----------------KKVIAIVFDGGYVVADV------KLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRE 136 (153)
T ss_dssp ----------------CEEEEEEEEEEECCCCC------CCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHH
T ss_pred ----------------ceEEEEEEEEEecCCcE------ecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhcc
Confidence 12223333333222211 123588899999999999986 55544 666655443
No 8
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.78 E-value=4.5e-18 Score=128.01 Aligned_cols=120 Identities=20% Similarity=0.247 Sum_probs=81.0
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcc
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
.++++++++.++ ++||++|.. |.|.||||++++|||+++||.||++||||+++....... ...+.++.
T Consensus 3 ~~~~~vi~~~~~-~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~--~~~~~~~~------- 70 (126)
T 1vcd_A 3 LGAGGVVFNAKR-EVLLLRDRM--GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLY--PTRYVNPK------- 70 (126)
T ss_dssp EEEEEEEECTTS-CEEEEECTT--SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEE--EEEEECTT-------
T ss_pred eEEEEEEEcCCC-EEEEEEECC--CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEe--EEEEecCC-------
Confidence 467778888777 899999976 899999999999999999999999999999874332111 11222211
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhh
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPF 217 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~ 217 (239)
......+|.+..... . ...+.|+.+++|++++++.++...+.. .++..+..+
T Consensus 71 -------~~~~~~~~~~~~~~~--~------~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~ 123 (126)
T 1vcd_A 71 -------GVEREVHWFLMRGEG--A------PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALER 123 (126)
T ss_dssp -------SCEEEEEEEEEEEES--C------CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHH
T ss_pred -------ceEEEEEEEEEEcCC--C------CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHh
Confidence 111233444433322 1 123458889999999999998755544 555554433
No 9
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.78 E-value=2.8e-18 Score=134.18 Aligned_cols=114 Identities=21% Similarity=0.230 Sum_probs=76.8
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecC------CCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCc
Q 026407 69 YRRNVGICLINSSKKKIFAATRIH------IPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFP 142 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~------~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 142 (239)
.+..+++++++.++ ++||++|.. .+|.|+||||++|.|||+++||+||++||||+++..+.... ...+.++
T Consensus 12 ~~~~~~~vi~~~~~-~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~--~~~~~~~ 88 (159)
T 1sjy_A 12 ELRAAGVVLLNERG-DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLG--AYLGRFP 88 (159)
T ss_dssp CEEEEEEEEBCTTC-CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEE--EEEEECT
T ss_pred EEEeEEEEEEeCCC-CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEE--EEecccC
Confidence 45677778887776 899988875 34899999999999999999999999999999975332111 1122222
Q ss_pred hhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 143 LKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
+. ......+|.+...... .... ...+|+.++.|++++++.++.
T Consensus 89 ~~-------------~~~~~~~f~~~~~~~~-~~~~----~~~~E~~~~~W~~~~el~~~~ 131 (159)
T 1sjy_A 89 DG-------------VLILRHVWLAEPEPGQ-TLAP----AFTDEIAEASFVSREDFAQLY 131 (159)
T ss_dssp TS-------------CEEEEEEEEEEECSSC-CCCC----CCCSSEEEEEEECHHHHHHHH
T ss_pred CC-------------ceEEEEEEEEEccCCC-cccc----CCCCceeEEEEecHHHHHHhh
Confidence 20 0112334444443221 0111 134588999999999999987
No 10
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.78 E-value=8.4e-18 Score=129.85 Aligned_cols=132 Identities=17% Similarity=0.321 Sum_probs=81.5
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccce----eeeccCceeeecCchhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE----FLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~----~~~~~~~~~~~~~~~~~~ 146 (239)
.+|++++++.+++++||++|...+|.|.||||++|+|||+++||+||++||||+++.. +.+.. ....|.+...
T Consensus 10 ~~v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~-~~~~~~~~~~-- 86 (150)
T 2o1c_A 10 VSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQ-RTVEFEIFSH-- 86 (150)
T ss_dssp EEEEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEE-EEEEEECCGG--
T ss_pred eEEEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeee-ceeeeeeecc--
Confidence 4677788887533999999877579999999999999999999999999999998743 11111 0111110000
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhh
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFS 215 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~ 215 (239)
....+..........+|.+...... . ....|+.+++|++++++.++...+.. .++..+.
T Consensus 87 --~~~~~~~~~~~~~~~~f~~~~~~~~--~------~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 146 (150)
T 2o1c_A 87 --LRHRYAPGVTRNTESWFCLALPHER--Q------IVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFV 146 (150)
T ss_dssp --GGGGBCTTCCEEEEEEEEEEESSCC--C------CCCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHT
T ss_pred --cccccCCCCcceEEEEEEEEcCCCC--C------cChhHhhccEeecHHHHHhhhcCHHHHHHHHHHH
Confidence 0000100001122344444443221 1 11258889999999999998755544 5555544
No 11
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.78 E-value=1.2e-18 Score=136.57 Aligned_cols=124 Identities=15% Similarity=0.204 Sum_probs=80.8
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKV 145 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 145 (239)
....+++++++.++ ++||++|... +|.|.||||++|+||++++||+||+.||||+++............+.+++
T Consensus 28 ~~~~~~~~i~~~~~-~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~-- 104 (158)
T 3hhj_A 28 LLIVVACALLDQDN-RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYET-- 104 (158)
T ss_dssp EEEEEEEEEBCTTS-EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS--
T ss_pred eEEEEEEEEEeCCC-EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCC--
Confidence 44455666777776 9999998754 38999999999999999999999999999998743211111112233222
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhh
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSP 216 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~ 216 (239)
.....++|.+...... ....|..+++|++++++.++...+.. .++..+..
T Consensus 105 --------------~~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~ 155 (158)
T 3hhj_A 105 --------------FHLLMPLYFCSHYKGV-------AQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKN 155 (158)
T ss_dssp --------------CEEEEEEEEESCCBSC-------CCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHH
T ss_pred --------------cEEEEEEEEEEECCCc-------cCCccccceEEEcHHHHhhCCCCcchHHHHHHHHH
Confidence 2333344444432221 12347789999999999987643333 55555543
No 12
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.78 E-value=3.1e-18 Score=130.10 Aligned_cols=121 Identities=21% Similarity=0.294 Sum_probs=76.6
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhc
Q 026407 70 RRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKL 149 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
...|++++++ ++ ++||++|.. |.|.||||+++.|||+.+||.||++||||+++........ ..+.+++.
T Consensus 4 ~~~~~~vi~~-~~-~vLl~~r~~--~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~--~~~~~~~~----- 72 (134)
T 2pbt_A 4 EFSAGGVLFK-DG-EVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGE--IHYWYTLK----- 72 (134)
T ss_dssp EEEEEEEEEE-TT-EEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEE--EEEEEEET-----
T ss_pred ceEEEEEEEE-CC-EEEEEEeCC--CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeE--EEEEeeCC-----
Confidence 3466677777 45 999999977 9999999999999999999999999999998743321111 11222110
Q ss_pred ccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 150 NRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
+........+|.+..... ... ..+|+.+++|++++++.++...+.. .++..+
T Consensus 73 -----~~~~~~~~~~~~~~~~~~--~~~------~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 125 (134)
T 2pbt_A 73 -----GERIFKTVKYYLMKYKEG--EPR------PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKA 125 (134)
T ss_dssp -----TEEEEEEEEEEEEEEEEE--CCC------CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHH
T ss_pred -----CcEEEEEEEEEEEEecCC--CcC------CCcceeEEEEEcHHHHHhhhcchhHHHHHHHH
Confidence 000111233333333321 111 1228899999999999997744433 444433
No 13
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.77 E-value=3.9e-18 Score=138.96 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=82.3
Q ss_pred CCceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceee-ecCchhh
Q 026407 67 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLT-YDFPLKV 145 (239)
Q Consensus 67 ~~~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~-~~~~~~~ 145 (239)
...+..+++++++.++.+|||++|.. .|.|.+|||++|+|||+++||+||++||||++...+......... +..+...
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 120 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIHHNI-YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHI 120 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEEETT-TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEE
T ss_pred CCccEEEEEEEEECCCCEEEEEEecC-CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCcc
Confidence 34667888888888766999998875 489999999999999999999999999999983222211111111 1111100
Q ss_pred hhhcccccCCcccCce---eEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhcC
Q 026407 146 KQKLNRRWGTNYKGQA---QKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCLA 220 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~~ 220 (239)
..+.+.... ...|++..... ..+. .+.+|+.+++|++++++.++...+-. .++..+..++..
T Consensus 121 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~ 186 (197)
T 3fcm_A 121 -------KRGKYVSSHLHLNLTYLIECSED-ETLM-----LKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKT 186 (197)
T ss_dssp -------ETTEEECCEEEEEEEEEEECCTT-SCCC-----CCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC
T ss_pred -------ccCcccCCceeEEEEEEEEeCCC-cccC-----CCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence 000000001 12333332221 1111 23458899999999999998844444 555555555553
No 14
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.77 E-value=8.3e-19 Score=137.19 Aligned_cols=128 Identities=15% Similarity=0.169 Sum_probs=85.9
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
....+++++++.++ ++||++|... +|.|.||||++|.|||+++||+||++||||+++....... .+...
T Consensus 19 ~~~~v~~~i~~~~~-~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~----~~~~~---- 89 (156)
T 3gg6_A 19 VCYVVLAVFLSEQD-EVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLS----VEERG---- 89 (156)
T ss_dssp CEEEEEEECBCTTS-EEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEE----EEESS----
T ss_pred eEEEEEEEEEeCCC-EEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEE----EEcCC----
Confidence 44566667777777 9999998764 4899999999999999999999999999999874332111 11110
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhcC
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCLA 220 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~~ 220 (239)
.+....+|++.......... ..+++|+.+++|++++++.+....+.. .++.....++..
T Consensus 90 -----------~~~~~~~f~~~~~~~~~~~~----~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 149 (156)
T 3gg6_A 90 -----------PSWVRFVFLARPTGGILKTS----KEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQ 149 (156)
T ss_dssp -----------TTEEEEEEEEEEEEECCCCG----GGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHHH
T ss_pred -----------CCEEEEEEEEEeeCCeeccC----CCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhhc
Confidence 11223344544433211111 123458899999999999988766655 666666666543
No 15
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=140.21 Aligned_cols=116 Identities=21% Similarity=0.267 Sum_probs=75.4
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC-CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI-PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~-~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
.+..|++++++.++.+|||++|... +|.|.||||++|+|||+++||+||++||||+++... ........+.++..
T Consensus 25 ~~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~-~l~~~~~~~~~~~~--- 100 (199)
T 3h95_A 25 HQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFR-SVLSIRQQHTNPGA--- 100 (199)
T ss_dssp -CCEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEEEEECC--------
T ss_pred ccceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccc-eEEEEEeeecCCCC---
Confidence 4557777777776559999888653 499999999999999999999999999999997421 11111111222211
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
......++++.......... .+++|+.+++|++++++.++.
T Consensus 101 ----------~~~~~~~~~~~~~~~~~~~~-----~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 101 ----------FGKSDMYIICRLKPYSFTIN-----FCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp --------------CEEEEEEEEESCCCCC-----CCTTTEEEEEEEEHHHHHHCS
T ss_pred ----------ceeEEEEEEEEEcCCCcccC-----CCccceeeeEEEeHHHHhhhh
Confidence 11223455555543322222 235589999999999999876
No 16
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.77 E-value=2.7e-18 Score=132.13 Aligned_cols=123 Identities=19% Similarity=0.234 Sum_probs=81.9
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCcccee--eeccCceeeecCch
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEF--LAETPYWLTYDFPL 143 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~ 143 (239)
....+++++++.++ ++||++|... +|.|.||||++|.||++.+||+||++||||+++... ... ....+.++
T Consensus 7 ~~~~~~~vi~~~~~-~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~--~~~~~~~~- 82 (144)
T 3r03_A 7 ILLVTAAALIDPDG-RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPL--AFASHSYD- 82 (144)
T ss_dssp EEEEEEEEEBCTTS-CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE--EEEEEECS-
T ss_pred eeEEEEEEEEcCCC-EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEE--EeeeccCC-
Confidence 44556667777776 8999998754 389999999999999999999999999999987433 211 12223321
Q ss_pred hhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhh
Q 026407 144 KVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPF 217 (239)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~ 217 (239)
+.....++|.+...... ....|..+++|++++++.++...+.. .+++.+.+.
T Consensus 83 ---------------~~~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 135 (144)
T 3r03_A 83 ---------------TFHLLMPLYACRSWRGR-------ATAREGQTLAWVRAERLREYPMPPADLPLIPILQDW 135 (144)
T ss_dssp ---------------SSEEEEEEEEECCCBSC-------CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHH
T ss_pred ---------------CeEEEEEEEEEEecCCc-------cCCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCc
Confidence 22333444444432221 12347789999999999997744434 555555443
No 17
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.77 E-value=3.8e-18 Score=132.31 Aligned_cols=111 Identities=23% Similarity=0.204 Sum_probs=70.4
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhh
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
+.+|++++++.++ ++||+++... ++.|+||||++|+|||+++||+||++||||+++..+...... +..+.
T Consensus 5 ~~~v~vi~~~~~~-~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~---~~~~~--- 77 (145)
T 2w4e_A 5 PRAVFILPVTAQG-EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGF---YPQPS--- 77 (145)
T ss_dssp CEEEEEEEEETTS-EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCB---BSCTT---
T ss_pred CCEEEEEEEcCCC-EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecC---cCCCC---
Confidence 4578888888887 7877554322 258999999999999999999999999999987544322221 11111
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
......++|++..... ... ..+++|+.+++|++++++.++.
T Consensus 78 ----------~~~~~~~~f~~~~~~~-~~~-----~~~~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 78 ----------ISGVVFYPLLALGVTL-GAA-----QLEDTETIERVVLPLAEVYRML 118 (145)
T ss_dssp ----------TCCCEEEEEEEEEEEE-C-------------CEEEEEEEHHHHHHHH
T ss_pred ----------ccCceEEEEEEEeccc-CCC-----CCCCCCeEEEEEEeHHHHHHHH
Confidence 1122334444432111 111 1234588899999999999987
No 18
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.76 E-value=6e-18 Score=130.73 Aligned_cols=111 Identities=18% Similarity=0.379 Sum_probs=74.3
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcc
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
+.+++++++.++.++||++|.. +|.|.||||++++|||+++||+||++||||+++..+..... +.....
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~-~~~~~~--------- 73 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQ-FIERNI--------- 73 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSC-EEEEEE---------
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhccccc-cccccc---------
Confidence 4566777777634999999875 48999999999999999999999999999998764432221 111111
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.+...++|++....... .......+|+.++.|++++++.++.
T Consensus 74 -------~~~~~~~~~~~~~~~~~----~~~~~~~~E~~~~~W~~~~el~~~~ 115 (146)
T 2jvb_A 74 -------QGKNYKIFLISGVSEVF----NFKPQVRNEIDKIEWFDFKKISKTM 115 (146)
T ss_dssp -------TTEEEEEEEECCCCSSS----CCCCCCSSSCCCEEEEEHHHHHTGG
T ss_pred -------CCceEEEEEEEeccccc----cCCcCCcchhheeEEeEHHHHHhhh
Confidence 11222333332222111 1112235688999999999999977
No 19
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.76 E-value=9.5e-18 Score=128.92 Aligned_cols=119 Identities=19% Similarity=0.186 Sum_probs=75.0
Q ss_pred eeeEEEEEEeCCCCEEEEEEecC-----CCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchh
Q 026407 70 RRNVGICLINSSKKKIFAATRIH-----IPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLK 144 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~-----~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 144 (239)
...+++++.+ ++ ++||++|.. .+|.|.||||++|+||++++||.||++||||+++....... ...+.+++
T Consensus 6 ~~~v~~vi~~-~~-~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~--~~~~~~~~- 80 (140)
T 3gwy_A 6 IEVVAAVIRL-GE-KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLL--TVHHTYPD- 80 (140)
T ss_dssp EEEEEEEEEE-TT-EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEE--EEECCCSS-
T ss_pred EEEEEEEEEe-CC-EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEE--EEEEEeCC-
Confidence 3455556666 55 999999875 34899999999999999999999999999999874332111 11222221
Q ss_pred hhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhh
Q 026407 145 VKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFS 215 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~ 215 (239)
......+|.+..... .. ...|..+++|++++++.++...+.. .+++.+.
T Consensus 81 -------------~~~~~~~f~~~~~~~--~~-------~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~ 130 (140)
T 3gwy_A 81 -------------FEITMHAFLCHPVGQ--RY-------VLKEHIAAQWLSTREMAILDWAEADKPIVRKIS 130 (140)
T ss_dssp -------------CCEEEEEEEEEECCS--CC-------CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHH
T ss_pred -------------ceEEEEEEEEEecCC--cc-------cccccceeEeccHHHHhhCCCCcccHHHHHHHH
Confidence 111233444433322 11 1247889999999999987644433 4554443
No 20
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.76 E-value=1.1e-17 Score=135.49 Aligned_cols=131 Identities=19% Similarity=0.136 Sum_probs=81.9
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
+.+|++++++ ++ +|||++|... .|.|+||||++|+|||+++||+||++||||+++.... .. ..+.+++
T Consensus 40 ~~~v~~ii~~-~~-~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~---~~~~~~~---- 109 (189)
T 3cng_A 40 KVIVGCIPEW-EN-KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRE-LY---AVYSLPH---- 109 (189)
T ss_dssp EEEEEEEEEE-TT-EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EE---EEEEEGG----
T ss_pred ceEEEEEEEe-CC-EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccce-eE---EEEecCC----
Confidence 3466666666 55 9999998753 4899999999999999999999999999999874221 11 1122222
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHH-HhhcchHH--HHHHHhhhhhcCCCcc
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVL-ERVRKPCG--LIFRYFSPFCLAPFMI 224 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~-~~~~~~~~--~~~~~l~~~~~~~~~~ 224 (239)
......+|.+..... .. ...+|..+++|++++++. ..+..+.. .+...+.......+..
T Consensus 110 ----------~~~~~~~f~~~~~~~--~~------~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~~~~~ 171 (189)
T 3cng_A 110 ----------ISQVYMLFRAKLLDL--DF------FPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHGQPAF 171 (189)
T ss_dssp ----------GTEEEEEEEEEECCS--CC------CCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHSSCCC
T ss_pred ----------CcEEEEEEEEEeCCC--cc------CCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCCCcce
Confidence 112233444443322 11 124588899999999998 22233333 3333333343456666
Q ss_pred cccc
Q 026407 225 YLKE 228 (239)
Q Consensus 225 ~l~~ 228 (239)
|+.+
T Consensus 172 y~g~ 175 (189)
T 3cng_A 172 HLGI 175 (189)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 6654
No 21
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.75 E-value=1e-17 Score=131.53 Aligned_cols=125 Identities=15% Similarity=0.168 Sum_probs=78.9
Q ss_pred CceeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhh
Q 026407 68 GYRRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKV 145 (239)
Q Consensus 68 ~~~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 145 (239)
..+..|++++++ ++ +|||++|... +|.|.||||++|.|||+++||+||++||||+++....... ...+.+++
T Consensus 27 ~~~~~v~~vi~~-~~-~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~-- 100 (157)
T 4dyw_A 27 QPRVGCGAAIVR-DG-RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLC--VVDHIDAA-- 100 (157)
T ss_dssp CCEEEEEEEEEE-TT-EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEE--EEEEEETT--
T ss_pred CceeEEEEEEEE-CC-EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEE--EEEeeccC--
Confidence 356677777777 45 9999998753 4999999999999999999999999999999874332111 11111111
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhh
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFS 215 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~ 215 (239)
.+.....++|.+....... ...+.+|+.+++|++++++.+.+ .+.. .+++.+.
T Consensus 101 ------------~~~~~~~~~f~~~~~~~~~----~~~~~~E~~~~~W~~~~el~~~l-~~~~~~~l~~l~ 154 (157)
T 4dyw_A 101 ------------NGEHWVAPVYLAHAFSGEP----RVVEPDRHEALGWFALDDLPQPL-THATRIALEQVT 154 (157)
T ss_dssp ------------TTEEEEEEEEEESEEESCC----CCSCTTTEEEEEEEETTSCCSSB-CHHHHHHHHHHC
T ss_pred ------------CCcEEEEEEEEEEEcCCCc----ccCCCCcEeEEEEECHHHccccc-CHHHHHHHHHHH
Confidence 0111222333333221111 11234588999999999998843 3333 5555543
No 22
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.75 E-value=1.2e-17 Score=129.46 Aligned_cols=123 Identities=19% Similarity=0.201 Sum_probs=81.2
Q ss_pred eeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
..+++++++.++ ++||++|... +|.|.||||++|.||++++||.||+.||||+++....... ...+.+++
T Consensus 22 ~~~~~~i~~~~~-~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~--~~~~~~~~---- 94 (153)
T 3ees_A 22 IPVVAGFLRKDG-KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKL--ACTHSYGD---- 94 (153)
T ss_dssp EEEEEEEEEETT-EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEE--EEEEEETT----
T ss_pred EEEEEEEEEECC-EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEE--EEEEecCC----
Confidence 355556666666 9999998764 3999999999999999999999999999999874332111 12233222
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhc
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCL 219 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~ 219 (239)
.....++|.+...... ....|..++.|++++++.++...+.. .+++.+..++.
T Consensus 95 ------------~~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 95 ------------VGILILFYEILYWKGE-------PRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp ------------EEEEEEEEEECEEESC-------CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred ------------CeEEEEEEEEEECCCC-------cCCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 2223334444322111 12347889999999999987644444 55665555543
No 23
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.75 E-value=1.2e-17 Score=132.52 Aligned_cols=118 Identities=20% Similarity=0.210 Sum_probs=72.9
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (239)
++..|++++++. + ++||++|...+|.|+||||++|+|||+++||+||++||||+++.... .. ....+....
T Consensus 22 ~~~~v~~ii~~~-~-~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~-~~~~~~~~~----- 92 (171)
T 3id9_A 22 MQVRVTGILIED-E-KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKK-LL-YVCDKPDAS----- 92 (171)
T ss_dssp CEEEEEEEEEET-T-EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EE-EEEEETTSS-----
T ss_pred eEEEEEEEEEEC-C-EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccce-EE-EEEcccCCC-----
Confidence 556677777764 5 99999998767999999999999999999999999999999973221 11 111111111
Q ss_pred cccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcch
Q 026407 149 LNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKP 206 (239)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 206 (239)
......+|.+..... .........+.+|+.+++|++++++.++...+
T Consensus 93 ---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 139 (171)
T 3id9_A 93 ---------PSLLHITFLLERIEG--EITLPSNEFDHNPIHDVQMVPINELSYYGFSE 139 (171)
T ss_dssp ---------SCEEEEEEEEEEC---------------CCCCCEEEEETGGGGGGTCCT
T ss_pred ---------CcEEEEEEEEEEcCC--cccCCccCCCcCeeeeEEEEeHHHHhhCCCCH
Confidence 111222333333222 22221112244588999999999999886333
No 24
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.75 E-value=2.2e-17 Score=130.27 Aligned_cols=119 Identities=19% Similarity=0.253 Sum_probs=72.4
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC----CCcEEcCceecCCCCCHHHHHHHHHHHHhCCcccee--eecc--CceeeecC
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI----PYTWQMPQGGADEGEDLINAALRELREETGVTSAEF--LAET--PYWLTYDF 141 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~--~~~~~~~~ 141 (239)
+..+++++++.++ ++||++|... +|.|+||||++|+||++++||+||++||||+++... .... .....+.+
T Consensus 27 ~~~~~~~ii~~~~-~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 105 (165)
T 3oga_A 27 QRTIVCPLIQNDG-CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTY 105 (165)
T ss_dssp EEEEEEEEEEETT-EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC
T ss_pred eEEEEEEEEeCCC-EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEec
Confidence 3445555666666 9999988743 389999999999999999999999999999987322 1110 00112333
Q ss_pred chhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcch
Q 026407 142 PLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKP 206 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 206 (239)
++.. .......++++........ ....+|+.+++|++++++.++...+
T Consensus 106 ~~~~-----------~~~~~~~~~~~~~~~~~~~------~~~~~E~~~~~W~~~~el~~~~~~~ 153 (165)
T 3oga_A 106 ADGR-----------QEEIYMIYLIFDCVSANRD------ICINDEFQDYAWVKPEELALYDLNV 153 (165)
T ss_dssp --CC-----------EEEEEEEEEEEEEEESCCC------CCCCTTEEEEEEECGGGGGGSCBCH
T ss_pred CCCC-----------ceeEEEEEEEEEeeccCCC------ccCCchheeeEEccHHHHhhCCCCH
Confidence 3311 0001122233333322211 1223588999999999999876444
No 25
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.74 E-value=8.9e-18 Score=132.44 Aligned_cols=125 Identities=13% Similarity=0.193 Sum_probs=80.9
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCC--CcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIP--YTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~--~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
.+.++.+++++.++.+|||++|...+ |.|+||||++|+|||+++||+||++||||+++..+.... ...+.++.
T Consensus 9 ~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~--- 83 (161)
T 3exq_A 9 VELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCG--TCEWFDDD--- 83 (161)
T ss_dssp EEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEE--EEEEECSS---
T ss_pred ceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEE--EEecccCC---
Confidence 45566677777763489999987543 789999999999999999999999999999874332111 11222211
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhh
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSP 216 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~ 216 (239)
.+.....+++.+....... ...|..+++|++++++.++...+.. +++..+..
T Consensus 84 -----------~~~~~~~~~~~~~~~~~~~-------~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 84 -----------RQHRKLGLLYRASNFTGTL-------KASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp -----------CSSEEEEEEEEECCEESCC-------CGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred -----------CCeEEEEEEEEEeccCCcc-------CCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 1123334455444332221 1336778999999999987644433 55554433
No 26
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.74 E-value=1e-17 Score=134.57 Aligned_cols=111 Identities=20% Similarity=0.193 Sum_probs=74.2
Q ss_pred eeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
.+|++++++.++ ++||++|... +|.|+||||++|+|||+++||+||++||||+++..+....... ..+
T Consensus 42 ~~v~v~i~~~~~-~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~---~~~----- 112 (182)
T 2yvp_A 42 AASFVLPVTERG-TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFH---PQP----- 112 (182)
T ss_dssp EEEEEEEBCTTS-EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBC---SCT-----
T ss_pred CEEEEEEEcCCC-EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEe---CCC-----
Confidence 577778888877 8999887642 3899999999999999999999999999999875443222210 000
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.......++|.+......... ..+.+|+.++.|++++++.++.
T Consensus 113 --------~~~~~~~~~f~~~~~~~~~~~-----~~~~~E~~~~~W~~~~el~~~~ 155 (182)
T 2yvp_A 113 --------SFTAVVFHPFLALKARVVTPP-----TLEEGELLESLELPLTEVYALL 155 (182)
T ss_dssp --------TTBCCEEEEEEECSCEECSCC-----CCCTTCCEEEEEEEHHHHHHHH
T ss_pred --------CccccEEEEEEEeccccCCCC-----CCCCCceEEEEEEEHHHHHHHH
Confidence 111222333333211111111 1245588999999999999987
No 27
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.74 E-value=2.9e-17 Score=126.76 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=76.2
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (239)
.+..+++++++.+++++||++|.. |.|.||||++|+||++++||+||+.||||+++........ +..+.++...
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~-~~~~~~~~~~--- 90 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAPN--GAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGE-ADEYFYSNHR--- 90 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECTT--SCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEE-EEEEEEETTT---
T ss_pred eeeEEEEEEECCCCCeEEEEEcCC--CCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEE-EEEEEcCCCC---
Confidence 345666777776333999999853 8999999999999999999999999999998743321111 1111111100
Q ss_pred cccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 149 LNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
.........+|.+..... .. ...+|+.++.|++++++.++...+.. .++..+
T Consensus 91 ------~~~~~~~~~~~~~~~~~~--~~------~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 143 (148)
T 2azw_A 91 ------QTAYYNPGYFYVANTWRQ--LS------EPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKW 143 (148)
T ss_dssp ------TEEEEEEEEEEEEEEEEE--CS------SCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHH
T ss_pred ------CcceEEEEEEEEEEcCcC--Cc------CCCCceeeEEEeeHHHHHhhhcchhHHHHHHHH
Confidence 000011122333332211 11 12346779999999999998755544 444433
No 28
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.74 E-value=5.1e-17 Score=129.98 Aligned_cols=110 Identities=21% Similarity=0.293 Sum_probs=74.0
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC----CCcEEc-CceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCch
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI----PYTWQM-PQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPL 143 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~-PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 143 (239)
.+.++++++++.++ ++||++|... +|.|+| |||++|.|||+++||+||++||||+++..+...... .+....
T Consensus 36 ~~~~~~v~i~~~~~-~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~--~~~~~~ 112 (180)
T 2fkb_A 36 RHRATYIVVHDGMG-KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQF--YFEDKN 112 (180)
T ss_dssp CEEEEEEEEECSSS-CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEE--EEEETT
T ss_pred eeeEEEEEEECCCC-EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEE--EecCCC
Confidence 45577778888777 8999988653 488999 999999999999999999999999987543322111 111110
Q ss_pred hhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 144 KVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
......+|.+. . ..... .+.+|+.++.|++++++.++.
T Consensus 113 --------------~~~~~~~f~~~--~-~~~~~-----~~~~E~~~~~W~~~~el~~~~ 150 (180)
T 2fkb_A 113 --------------CRVWGALFSCV--S-HGPFA-----LQEDEVSEVCWLTPEEITARC 150 (180)
T ss_dssp --------------EEEEEEEEEEE--C-CCCCC-----CCTTTEEEEEEECHHHHHTTG
T ss_pred --------------ceEEEEEEEEe--c-CCCcC-----CChhHhheEEEecHHHHHHHH
Confidence 01122333333 1 11111 234588999999999999974
No 29
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.74 E-value=4.2e-17 Score=131.95 Aligned_cols=115 Identities=18% Similarity=0.237 Sum_probs=77.0
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC----CCcEEc-CceecCCCCCHHHHHHHHHHHHhCCcccee-eeccCceeeecCc
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI----PYTWQM-PQGGADEGEDLINAALRELREETGVTSAEF-LAETPYWLTYDFP 142 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~-PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~ 142 (239)
++.+|++++++.++ ++||++|... +|.|++ |||++|+|||+++||+||++||||+++..+ ...........++
T Consensus 31 ~~~~v~~~i~~~~g-~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 109 (190)
T 1hzt_A 31 LHLAFSSWLFNAKG-QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDP 109 (190)
T ss_dssp CEECEEEEEECTTC-CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECT
T ss_pred eEEEEEEEEEcCCC-EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCC
Confidence 55678888888777 8999998643 499999 999999999999999999999999998544 2222221111222
Q ss_pred hhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 143 LKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
+. ........+|.+...+ .... ..+|+.+++|++++++.++.
T Consensus 110 ~~-----------~~~~~~~~~f~~~~~~---~~~~-----~~~E~~~~~W~~~~el~~~~ 151 (190)
T 1hzt_A 110 SG-----------IVENEVCPVFAARTTS---ALQI-----NDDEVMDYQWCDLADVLHGI 151 (190)
T ss_dssp TS-----------CEEEEECCEEEEEBCS---CCCC-----CTTTEEEEEEECHHHHHHHH
T ss_pred CC-----------CcceEEEEEEEEecCC---CCcC-----CccceeeEEEecHHHHHHHH
Confidence 10 0001122344444322 1221 34588999999999999876
No 30
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.74 E-value=3.5e-17 Score=128.07 Aligned_cols=56 Identities=21% Similarity=0.238 Sum_probs=48.8
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCcc
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTS 126 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~ 126 (239)
+.+|++++++.++ ++||++|... +|.|.||||++|+|||+++||+||++||||+++
T Consensus 18 ~~~v~~vi~~~~~-~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~ 75 (160)
T 1rya_A 18 LVSLDFIVENSRG-EFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRL 75 (160)
T ss_dssp EEEEEEEEECTTS-CEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCC
T ss_pred EEEEEEEEEcCCC-EEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCC
Confidence 4577778887666 8999888754 389999999999999999999999999999985
No 31
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.74 E-value=3.6e-17 Score=128.41 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=48.6
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccc
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSA 127 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 127 (239)
.+.+|++++++ ++ +|||++|.. +|.|.||||++|+|||+++||+||++||||+++.
T Consensus 5 ~~~~v~~vi~~-~~-~vLL~~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 60 (159)
T 3f6a_A 5 RHFTVSVFIVC-KD-KVLLHLHKK-AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVT 60 (159)
T ss_dssp SCEEEEEEEEE-TT-EEEEEECSS-SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred ceEEEEEEEEE-CC-EEEEEEcCC-CCeEECCccCccCCCCHHHHHHHHHHHHhCCCce
Confidence 34566777777 45 999999876 5899999999999999999999999999999874
No 32
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.73 E-value=3.2e-18 Score=133.85 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=67.6
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceee--eccCc-eeeecCchhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFL--AETPY-WLTYDFPLKV 145 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~--~~~~~-~~~~~~~~~~ 145 (239)
.+..+++++++.++ +|||++|. +|.|.||||++|+||++++||+||++||||+++.... +.... ...+.+++..
T Consensus 20 ~~~~v~~ii~~~~~-~vLL~~r~--~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 96 (153)
T 3eds_A 20 FXPSVAAVIKNEQG-EILFQYPG--GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGD 96 (153)
T ss_dssp EEEEEEEEEBCTTC-CEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSC
T ss_pred EeeeEEEEEEcCCC-eEEEEEcC--CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCC
Confidence 55667777777776 89999888 6999999999999999999999999999999874332 11100 0012222210
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.......+|.+.... .... ..++|+.+++|++++++.++.
T Consensus 97 -----------~~~~~~~~f~~~~~~--~~~~-----~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 97 -----------EVEYIVVVFECEVTS--GELR-----SIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp -----------EEEEEEEEEEEEEEE--ECCC------------CEEEECGGGCCCBS
T ss_pred -----------eEEEEEEEEEEEecC--Cccc-----cCCCcEEEEEEECHHHCchhc
Confidence 001112233333222 2222 124588899999999998765
No 33
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.73 E-value=3.7e-17 Score=127.26 Aligned_cols=103 Identities=22% Similarity=0.355 Sum_probs=66.8
Q ss_pred EEEeCCCCEEEEEEecCC-CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcccccC
Q 026407 76 CLINSSKKKIFAATRIHI-PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWG 154 (239)
Q Consensus 76 ~i~~~~~~~vLl~~r~~~-~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
++++.++ ++||++|... +|.|.||||++|.|||+++||+||++||||+++...... ....+.+++.
T Consensus 10 ~ii~~~~-~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~--~~~~~~~~~~---------- 76 (153)
T 3shd_A 10 CVVHAEG-KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFI--RMHQWIAPDK---------- 76 (153)
T ss_dssp EEEEETT-EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEE--EEEEECCTTS----------
T ss_pred EEEEeCC-EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEE--EEEEEecCCC----------
Confidence 4444555 9999888632 388999999999999999999999999999997432211 1122333221
Q ss_pred CcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHH
Q 026407 155 TNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVL 200 (239)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~ 200 (239)
......+|.+....... ....+.|+.+++|++++++.
T Consensus 77 ---~~~~~~~f~~~~~~~~~------~~~~~~E~~~~~W~~~~el~ 113 (153)
T 3shd_A 77 ---TPFLRFLFAIELEQICP------TQPHDSDIDCCRWVSAEEIL 113 (153)
T ss_dssp ---CCEEEEEEEEECSSCCC------CCCCSTTCCEEEEECHHHHH
T ss_pred ---ceEEEEEEEEEccccCc------CCCCcccceeeEEecHHHhh
Confidence 11122344444333211 12235588999999999994
No 34
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.73 E-value=4.1e-17 Score=130.76 Aligned_cols=113 Identities=18% Similarity=0.237 Sum_probs=72.3
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
+..+++++++.++ ++||++|... +|.|.||||++|+|||+++||+||++||||+++..+..... ..+.++.
T Consensus 24 ~~~~~~~vi~~~~-~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~--~~~~~~~---- 96 (176)
T 3q93_A 24 SRLYTLVLVLQPQ-RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQ--IVFEFVG---- 96 (176)
T ss_dssp EEEEEEEEEECSS-EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEE--EEEEETT----
T ss_pred CcEEEEEEEEeCC-EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEE--EEEEcCC----
Confidence 3445556666666 9999888653 49999999999999999999999999999999753322211 1222211
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcch
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKP 206 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 206 (239)
.......++|.+....... ...|..+++|++++++.++...+
T Consensus 97 ----------~~~~~~~~~f~~~~~~~~~-------~~~e~~~~~W~~~~el~~~~~~~ 138 (176)
T 3q93_A 97 ----------EPELMDVHVFCTDSIQGTP-------VESDEMRPCWFQLDQIPFKDMWP 138 (176)
T ss_dssp ----------CSCEEEEEEEEESCEESCC-------CCCSSEEEEEEETTCCCGGGBCT
T ss_pred ----------CCcEEEEEEEEEECCCCCc-------CCCcceeeEEeeHHHccccccCc
Confidence 0112223444443322111 12356678999999999775333
No 35
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.73 E-value=3.4e-17 Score=127.18 Aligned_cols=122 Identities=17% Similarity=0.229 Sum_probs=74.4
Q ss_pred EEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhccccc
Q 026407 76 CLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRW 153 (239)
Q Consensus 76 ~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (239)
++++.++ ++||++|... ++.|.||||++|+|||+++||+||++||||+++....... ...+.++...
T Consensus 13 ~ii~~~~-~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~--~~~~~~~~~~-------- 81 (153)
T 2b0v_A 13 AVIEQDD-KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTG--IYHWTCASNG-------- 81 (153)
T ss_dssp EECEETT-EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEE--EEEEEETTTT--------
T ss_pred EEEeeCC-EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEE--EEEEeCCCCC--------
Confidence 3344555 8999888654 4799999999999999999999999999999874322111 1122222100
Q ss_pred CCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh---cchHHHHHHHhhhhhcC
Q 026407 154 GTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV---RKPCGLIFRYFSPFCLA 220 (239)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~---~~~~~~~~~~l~~~~~~ 220 (239)
......+|.+..... .. ....++|+.+++|++++++.++. ..+ .+.+.+..++..
T Consensus 82 ----~~~~~~~f~~~~~~~--~~----~~~~~~e~~~~~W~~~~el~~~~~~~~~~--~~~~~l~~~~~~ 139 (153)
T 2b0v_A 82 ----TTYLRFTFSGQVVSF--DP----DRKLDTGIVRAAWFSIDEIRAKQAMHRTP--LVMQCIEDYHAG 139 (153)
T ss_dssp ----EEEEEEEEEEEEEEE--CT----TSCCCTTEEEEEEEEHHHHHHTGGGBSST--HHHHHHHHHHTT
T ss_pred ----cEEEEEEEEEEeCCC--CC----CCCCCCCeeeEEEecHHHHhhhhcccCcH--HHHHHHHHHHhC
Confidence 001122233333221 10 11234588899999999999963 333 344444555554
No 36
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.73 E-value=1.2e-17 Score=142.64 Aligned_cols=115 Identities=18% Similarity=0.226 Sum_probs=75.9
Q ss_pred EEEeCCCCEEEEEEecCCC-CcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcccccC
Q 026407 76 CLINSSKKKIFAATRIHIP-YTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWG 154 (239)
Q Consensus 76 ~i~~~~~~~vLl~~r~~~~-~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
++++.++ +|||++|...+ |.|.+|||++|+|||+++||+||++||||+++..+..... ..+.+++
T Consensus 145 v~v~~~~-~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~--~~~~~~~----------- 210 (269)
T 1vk6_A 145 VAIRRDD-SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS--QPWPFPQ----------- 210 (269)
T ss_dssp EEEEETT-EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEE--EEEETTE-----------
T ss_pred EEEEeCC-EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEE--EecCCCC-----------
Confidence 3444455 99999987654 9999999999999999999999999999999854432211 1233322
Q ss_pred CcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh-cchHH-HHHHHhhh
Q 026407 155 TNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV-RKPCG-LIFRYFSP 216 (239)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~-~~~~~-~~~~~l~~ 216 (239)
.....|.+.... .++.. +.+|..+++|++++++..+. ...+. .+++.+..
T Consensus 211 -----~~~~~f~a~~~~--~~~~~-----~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~ 262 (269)
T 1vk6_A 211 -----SLMTAFMAEYDS--GDIVI-----DPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA 262 (269)
T ss_dssp -----EEEEEEEEEEEE--CCCCC-----CTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHH
T ss_pred -----EEEEEEEEEECC--CCcCC-----CCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHH
Confidence 223344444332 22222 24588999999999998876 33333 45544433
No 37
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.72 E-value=8.6e-17 Score=122.94 Aligned_cols=117 Identities=21% Similarity=0.276 Sum_probs=73.5
Q ss_pred eEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhh
Q 026407 72 NVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 72 ~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (239)
.+++++++.++ ++||++|... +|.|+||||+++.||++++||.||+.||||+++..+.... ...+.+++
T Consensus 10 ~~~~~ii~~~~-~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~--~~~~~~~~----- 81 (140)
T 2rrk_A 10 EVVAAIIERDG-KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVA--SHQREVSG----- 81 (140)
T ss_dssp EEEEEEEEETT-EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEE--EEEEEETT-----
T ss_pred eEEEEEEEcCC-EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEE--EEEEecCC-----
Confidence 34444456666 9999998654 3999999999999999999999999999999874322111 11222221
Q ss_pred cccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 149 LNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
.....++|.+...... . ...|+.++.|++++++.++...+.. .+++.+
T Consensus 82 -----------~~~~~~~~~~~~~~~~--~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 130 (140)
T 2rrk_A 82 -----------RIIHLHAWHVPDFHGT--L-----QAHEHQALVWCSPEEALQYPLAPADIPLLEAF 130 (140)
T ss_dssp -----------EEEEEEEEEESEEEEC--C-----CCSSCSCEEEECHHHHTTSCCCTTHHHHHHHH
T ss_pred -----------cEEEEEEEEEEeeCCC--c-----CCCccceeEEeCHHHHhhCCCChhHHHHHHHH
Confidence 1122223333322111 1 1247788999999999987633333 444443
No 38
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.72 E-value=4.6e-17 Score=124.78 Aligned_cols=107 Identities=20% Similarity=0.152 Sum_probs=70.6
Q ss_pred eeeEEEEEEe--CCCCE--EEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhh
Q 026407 70 RRNVGICLIN--SSKKK--IFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKV 145 (239)
Q Consensus 70 ~~~v~v~i~~--~~~~~--vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 145 (239)
+..|++++++ .++ + +||++|...++.|+||||++|+|||+++||+||++||||+++..... ...+..+...
T Consensus 9 ~~~v~~vi~~~~~~~-~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~----~~~~~~~~~~ 83 (139)
T 2yyh_A 9 LLATDVIIRLWDGEN-FKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKL----MGVYSDPERD 83 (139)
T ss_dssp EEEEEEEEEEEETTE-EEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE----EEEECCTTSC
T ss_pred eEEEEEEEEEEcCCC-cEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceE----EEEECCCCcC
Confidence 4566666665 555 6 99999987666699999999999999999999999999998743211 1112221100
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHH
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVL 200 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~ 200 (239)
........+|.+...+ .. ...+|+.+++|++++++.
T Consensus 84 ----------~~~~~~~~~f~~~~~~---~~------~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 84 ----------PRAHVVSVVWIGDAQG---EP------KAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp ----------TTSCEEEEEEEEEEES---CC------CCCTTEEEEEEECTTSCC
T ss_pred ----------CCceEEEEEEEEecCC---cc------CCCCCcceEEEEEHHHCC
Confidence 0011123344444421 11 134588899999999999
No 39
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.72 E-value=6.3e-17 Score=128.56 Aligned_cols=109 Identities=27% Similarity=0.402 Sum_probs=69.5
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhh
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
+.+|++++++ ++ ++||++|... +|.|+||||++|+|||+++||+||++||||+ +..+...... +..+.
T Consensus 34 ~~~v~vii~~-~~-~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~---~~~~~--- 104 (170)
T 1v8y_A 34 KPAVAVIALR-EG-RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSY---FVSPG--- 104 (170)
T ss_dssp CCEEEEEEEE-TT-EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEE---ESCTT---
T ss_pred CCeEEEEEEE-CC-EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEE---ecCCC---
Confidence 3477788888 66 8999887532 4899999999999999999999999999999 6444322111 11111
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.......+|.+..... ... ..+++|+.++.|++++++.++.
T Consensus 105 ----------~~~~~~~~f~~~~~~~-~~~-----~~~~~E~~~~~W~~~~el~~~~ 145 (170)
T 1v8y_A 105 ----------FTDEKTHVFLAENLKE-VEA-----HPDEDEAIEVVWMRPEEALERH 145 (170)
T ss_dssp ----------TBCCEEEEEEEEEEEE-CC-------------CEEEEECHHHHHHHH
T ss_pred ----------ccccEEEEEEEEeccc-cCC-----CCCCCceEEEEEEEHHHHHHHH
Confidence 1122344444443221 111 1234588999999999999987
No 40
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.72 E-value=1.9e-17 Score=133.69 Aligned_cols=129 Identities=22% Similarity=0.163 Sum_probs=77.3
Q ss_pred eeEEEEEE--eCC----CCEEEEEEec---------CCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCc
Q 026407 71 RNVGICLI--NSS----KKKIFAATRI---------HIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPY 135 (239)
Q Consensus 71 ~~v~v~i~--~~~----~~~vLl~~r~---------~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 135 (239)
.+|.++++ +.+ +.+|||++|. ..+|.|.+|||++|+|||+++||+||++||||+++..+...
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l--- 104 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPF--- 104 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEE---
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEE---
Confidence 45555444 333 2389999993 33599999999999999999999999999999987433211
Q ss_pred eeeecCchhhhhhcccccCCcccCc-eeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh----cchHH-H
Q 026407 136 WLTYDFPLKVKQKLNRRWGTNYKGQ-AQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV----RKPCG-L 209 (239)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~----~~~~~-~ 209 (239)
..+..+... ..+. ....|.+.+......... ..+|+.+++|++++++.++. .+.++ .
T Consensus 105 -~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~-----~~~E~~~~~W~~~~el~~~~l~~~~~~il~~ 167 (187)
T 3i9x_A 105 -GVFDKPGRD-----------PRGWIISRAFYAIVPPEALEKRA-----AGDDAAEIGLFPMTEALELPLAFDHLDMLKK 167 (187)
T ss_dssp -EEECCTTSS-----------TTSSEEEEEEEEECCHHHHHHHH-----HSTTTTTEEEEEHHHHTTSCBSTTHHHHHHH
T ss_pred -EEEcCCccC-----------CCCCEEEEEEEEEEcCcccCCcC-----CCCceeEEEEEeHHHcccCCCCccHHHHHHH
Confidence 112222110 0111 123333333322111111 13478899999999999753 33444 5
Q ss_pred HHHHhhhhhc
Q 026407 210 IFRYFSPFCL 219 (239)
Q Consensus 210 ~~~~l~~~~~ 219 (239)
+++.++....
T Consensus 168 a~~~l~~~~~ 177 (187)
T 3i9x_A 168 AFSAITEEFL 177 (187)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 5555555443
No 41
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.71 E-value=1.9e-17 Score=134.92 Aligned_cols=62 Identities=29% Similarity=0.542 Sum_probs=51.0
Q ss_pred CCceeeEEEEEE-eCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccce
Q 026407 67 DGYRRNVGICLI-NSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE 128 (239)
Q Consensus 67 ~~~~~~v~v~i~-~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~ 128 (239)
..++..++++++ +.++.+|||++|...+|.|+||||++|+|||+++||+||++||||+++..
T Consensus 37 ~~~~~~~~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~ 99 (194)
T 2fvv_A 37 DGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTL 99 (194)
T ss_dssp TSCEEEEEEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEE
T ss_pred CCccccEEEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCcccc
Confidence 346666776666 33334999999887679999999999999999999999999999998743
No 42
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.71 E-value=4.4e-17 Score=129.29 Aligned_cols=108 Identities=21% Similarity=0.302 Sum_probs=73.6
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC----CCcEE-cCceecCCCCCHHHHHHHHHHHHhCCccce--eeeccCceeeec-C
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI----PYTWQ-MPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYD-F 141 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~~~-~ 141 (239)
+.++++++++.++ ++||++|... +|.|+ +|||++++|||+.+||+||++||||+++.. +... ..+. +
T Consensus 34 ~~~v~v~i~~~~~-~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~----~~~~~~ 108 (171)
T 1q27_A 34 VRVVNAFLRNSQG-QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPL----ASFSPF 108 (171)
T ss_dssp CEEEEEEEEETTT-EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEE----EEECSS
T ss_pred ceEEEEEEECCCC-eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEE----EEEecc
Confidence 5677788888887 9999988542 48998 999999999999999999999999999743 2211 1111 1
Q ss_pred chhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 142 PLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
... ......+|.+.. ...... ...|+.+++|++++++.++.
T Consensus 109 ~~~-------------~~~~~~~f~~~~---~~~~~~-----~~~E~~~~~W~~~~el~~~~ 149 (171)
T 1q27_A 109 QTT-------------LSSFMCVYELRS---DATPIF-----NPNDISGGEWLTPEHLLARI 149 (171)
T ss_dssp SSC-------------CSSEEEEEEEEC---CCCCCS-----CTTTCSCCEEECHHHHHHHH
T ss_pred CCC-------------CccEEEEEEEEE---CCcccc-----CchhhheEEEecHHHHHHHH
Confidence 110 011233333333 112222 23588899999999999764
No 43
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.70 E-value=5.9e-17 Score=133.49 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=72.7
Q ss_pred eeEEEEEEeCCCCEEEEEEecCC--------CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCc
Q 026407 71 RNVGICLINSSKKKIFAATRIHI--------PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFP 142 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~--------~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 142 (239)
.+|++++++++++++||+++... ++.|+||||++|+||++++||+||++||||+++..+...... +..+
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~---~~~~ 134 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSF---LASP 134 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEE---ESCT
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEE---ecCC
Confidence 47777888854348888654322 367999999999999999999999999999998544332221 2221
Q ss_pred hhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 143 LKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
. +.....++|++...... ........+++|..++.|++++++.+++
T Consensus 135 g-------------~~~~~~~~f~a~~~~~~--~~~~~~~~~e~E~~~~~w~~~~el~~~i 180 (209)
T 1g0s_A 135 G-------------GTSERSSIMVGEVDATT--ASGIHGLADENEDIRVHVVSREQAYQWV 180 (209)
T ss_dssp T-------------TBCCEEEEEEEECCGGG--CC--------CCSCEEEEEEHHHHHHHH
T ss_pred C-------------ccCcEEEEEEEEEcccc--ccCCCCCCCCCcEEEEEEEEHHHHHHHH
Confidence 1 12233445544432211 0000012345578899999999999987
No 44
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.70 E-value=6.2e-17 Score=131.44 Aligned_cols=113 Identities=20% Similarity=0.170 Sum_probs=72.9
Q ss_pred eeEEEEEEeCCCCEEEEEEecC---------CCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecC
Q 026407 71 RNVGICLINSSKKKIFAATRIH---------IPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDF 141 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~---------~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 141 (239)
.+|++++++.+++++||+++.. .++.|+||||++| |||+++||+||++||||+++..+...... +..
T Consensus 46 ~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~---~~~ 121 (191)
T 3o6z_A 46 NGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFEL---YMS 121 (191)
T ss_dssp CEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEE---ESC
T ss_pred CEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEE---EeC
Confidence 4777888886544899877653 4589999999999 99999999999999999998544322221 111
Q ss_pred chhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 142 PLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
+ .+.....++|+....... .... ....++|+.++.|++++++.+++
T Consensus 122 ~-------------~~~~~~~~~f~~~~~~~~-~~~~--~~~~~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 122 P-------------GGVTELIHFFIAEYSDNQ-RANA--GGGVEDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp T-------------TTBCCEEEEEEEECCTTC-C----------CCSSEEEEEEHHHHHHHH
T ss_pred C-------------CccCcEEEEEEEEEcccc-cccC--CCCCCCcEEEEEEEEHHHHHHHH
Confidence 1 112233445555443211 1111 01115588999999999999987
No 45
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.70 E-value=7.7e-17 Score=126.30 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=46.6
Q ss_pred eEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccc
Q 026407 72 NVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSA 127 (239)
Q Consensus 72 ~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 127 (239)
.+++++++ ++ ++||++|.. +|.|.||||++|+|||+++||.||++||||+++.
T Consensus 3 ~~~~vi~~-~~-~vLL~~r~~-~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 3 VTSGVLVE-NG-KVLLVKHKR-LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp EEEEECEE-TT-EEEEEECTT-TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEEE-CC-EEEEEEEcC-CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 55667777 55 999999876 5899999999999999999999999999999874
No 46
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.70 E-value=6e-17 Score=132.97 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=70.3
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhc
Q 026407 70 RRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKL 149 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
+..|+++|++ ++ +|||++|.. +|.|.||||++|+|||+.+||+||++||||+++....... .+.....
T Consensus 68 ~~~v~~vv~~-~~-~vLLv~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~----~~~~~~~----- 135 (205)
T 3q1p_A 68 KVDIRAVVFQ-NE-KLLFVKEKS-DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLA----IFDKEKH----- 135 (205)
T ss_dssp EEEEEEEEEE-TT-EEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEE----EEEHHHH-----
T ss_pred cceEEEEEEE-CC-EEEEEEEcC-CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEE----EEecccc-----
Confidence 3566667776 45 999999874 5899999999999999999999999999999874221111 1110000
Q ss_pred ccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 150 NRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.......+....+|.+..... ... .+.|+.+++|++++++.++.
T Consensus 136 --~~~~~~~~~~~~~~~~~~~~~--~~~------~~~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 136 --QPSPSATHVYKIFIGCEIIGG--EKK------TSIETEEVEFFGENELPNLS 179 (205)
T ss_dssp --SCCCCSSCEEEEEEEEEEEEE--CCC------CCTTSCCEEEECTTSCCCBC
T ss_pred --CCCCCCceEEEEEEEEEecCC--ccC------CCCcceEEEEEeHHHhhhcC
Confidence 000000111233444444322 111 23588999999999999877
No 47
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.69 E-value=1.7e-16 Score=128.69 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=73.4
Q ss_pred CceeeEEEEEEeCCCC-EEEEEEecC----CCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceee--eccCceeeec
Q 026407 68 GYRRNVGICLINSSKK-KIFAATRIH----IPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFL--AETPYWLTYD 140 (239)
Q Consensus 68 ~~~~~v~v~i~~~~~~-~vLl~~r~~----~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~--~~~~~~~~~~ 140 (239)
..+.++++++++.++. ++||++|.. .+|.|+||||++|+|||+++||+||++||||+++..+. +..... +.
T Consensus 32 ~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~--~~ 109 (194)
T 1nqz_A 32 HYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDV--FT 109 (194)
T ss_dssp -CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCE--EE
T ss_pred CCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCc--cC
Confidence 3556666666665543 788888864 35999999999999999999999999999999875332 222111 11
Q ss_pred CchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHH-HHhh
Q 026407 141 FPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQV-LERV 203 (239)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel-~~~~ 203 (239)
. .+...++|++.......... ...+|+.++.|++++++ .+..
T Consensus 110 ~----------------~~~~~~~f~~~~~~~~~~~~-----~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 110 P----------------VGFHVTPVLGRIAPEALDTL-----RVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp T----------------TTEEEEEEEEEECGGGGGGC-----CCCTTEEEEECCBHHHHHHSCC
T ss_pred C----------------CCeEEEEEEEEecCCccccC-----CCccceeEEEEEEHHHhccCCC
Confidence 0 12234455555442211011 23458899999999999 7644
No 48
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.69 E-value=1.3e-16 Score=142.11 Aligned_cols=151 Identities=11% Similarity=0.090 Sum_probs=96.3
Q ss_pred CCCCCCCCCcCCCcccc--ccccCCCCCCCC--ceeeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHH
Q 026407 40 RKPLCCSCDDSSSSLSS--FTALSTETPPDG--YRRNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLIN 112 (239)
Q Consensus 40 ~~~~~c~~~~~~~a~~~--~~~~~~~~~~~~--~~~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~ 112 (239)
|.|..||+...|.+... ....|.+.++.. .+..+++++.+.++ +|||++|... +|+|+||||++|.| |+++
T Consensus 206 P~C~~Cpl~~~C~~~~~~~~~~~PvK~~kk~~~~~~~~~~vi~~~~g-~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~ 283 (369)
T 3fsp_A 206 PSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEG-RVLIRKRDSTGLLANLWEFPSCETDGA-DGKE 283 (369)
T ss_dssp CCTTTCTTGGGCHHHHHTCGGGCSCCCCCCCCEEEEEEEEEEECSSS-EEEEEECCSSSTTTTCEECCEEECSSS-CTHH
T ss_pred CCCCCCCChhhhHHHhcCCcccCCccccccCcceEEEEEEEEEeCCC-EEEEEECCCCCCcCCcccCCCcccCCC-CcHH
Confidence 34444999999987553 233344433332 33344555666666 9999999764 39999999999999 9999
Q ss_pred HHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeE
Q 026407 113 AALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWR 192 (239)
Q Consensus 113 aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~ 192 (239)
|+.||+.||||+++...... ....+.+++. .....+|.+..... ..|..++.
T Consensus 284 al~REl~EE~Gl~v~~~~~l--~~~~h~~~h~--------------~~~~~~~~~~~~~~------------~~e~~~~~ 335 (369)
T 3fsp_A 284 KLEQMVGEQYGLQVELTEPI--VSFEHAFSHL--------------VWQLTVFPGRLVHG------------GPVEEPYR 335 (369)
T ss_dssp HHHHHHTTSSSCCEEECCCC--CEEEEECSSE--------------EEEEEEEEEEECCS------------SCCCTTEE
T ss_pred HHHHHHHHHhCCceeeeccc--ccEEEEcceE--------------EEEEEEEEEEEcCC------------CCCccccE
Confidence 99999999999987433211 1233444331 01122333332221 23678899
Q ss_pred EeCHhHHHHhhcchHH-HHHHHhhhhhcC
Q 026407 193 WMFPEQVLERVRKPCG-LIFRYFSPFCLA 220 (239)
Q Consensus 193 Wv~~eel~~~~~~~~~-~~~~~l~~~~~~ 220 (239)
|++++++.++...+.. .+++.+..++..
T Consensus 336 Wv~~~el~~~~l~~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 336 LAPEDELKAYAFPVSHQRVWREYKEWASG 364 (369)
T ss_dssp EEEGGGGGGSCCCHHHHHHHHHHHHHTC-
T ss_pred EeeHHHhhhCCCCHHHHHHHHHHHHHhcC
Confidence 9999999987644555 677766665543
No 49
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.69 E-value=5e-17 Score=139.09 Aligned_cols=112 Identities=16% Similarity=0.317 Sum_probs=72.7
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcc
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
.++++++++.+++++||++|...+|.|++|||++|+|||+++||+||++||||+++..+.... .+....+
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~-~~~~~~~--------- 171 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPN-EFIDMTI--------- 171 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTT-CEEEEEE---------
T ss_pred CeEEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeee-eeccCCc---------
Confidence 356777777653499999998767999999999999999999999999999999986543222 1111111
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.++..++|++......... .....+|+.+++|++++++.++.
T Consensus 172 -------~~~~~~~f~~~~~~~~~~~----~~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 172 -------RGQNVRLYIIPGISLDTRF----ESRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp -------TTEEEEEEEECCCCTTCCC----C------EEEEEEEEGGGSTTCC
T ss_pred -------CCceEEEEEEEEecCcccC----CCCCccceeEEEEEEHHHHHHHH
Confidence 1222333443322211111 11245689999999999998765
No 50
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.68 E-value=9.7e-17 Score=125.08 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=71.5
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (239)
++.++++++++ ++ ++||++| +|.|.||||++++||++++||+||++||||+++....... ...+.++..
T Consensus 18 ~~~~~~~ii~~-~~-~vLl~~r---~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~~---- 86 (154)
T 2pqv_A 18 FGVRATALIVQ-NH-KLLVTKD---KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAF--VVENRFEVD---- 86 (154)
T ss_dssp EEEEEEECCEE-TT-EEEEEEE---TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEE--EEEEEEEET----
T ss_pred EeEEEEEEEEE-CC-EEEEEec---CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEE--EEeeeecCC----
Confidence 55666666776 45 8999999 5899999999999999999999999999999874321111 111111110
Q ss_pred cccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 149 LNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
+........+|.+.......... .+++|..+++|++++++.++.
T Consensus 87 ------~~~~~~~~~~f~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~~ 130 (154)
T 2pqv_A 87 ------GVSYHNIEFHYLVDLLEDAPLTM-----QEDEKRQPCEWIDLDKLQNIQ 130 (154)
T ss_dssp ------TEEEEEEEEEEEEEESSCCCSEE-----EETTEEEEEEEEEGGGGGGSC
T ss_pred ------CCcceEEEEEEEEEecCCCCccc-----CCCCceeeEEEeEHHHHhhcC
Confidence 00001122344444433211100 123478899999999999865
No 51
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.68 E-value=3.1e-16 Score=129.26 Aligned_cols=116 Identities=23% Similarity=0.244 Sum_probs=72.3
Q ss_pred eeEEEEEEeCC---CCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchh
Q 026407 71 RNVGICLINSS---KKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLK 144 (239)
Q Consensus 71 ~~v~v~i~~~~---~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 144 (239)
.+|+++.+..+ +.++||+++... ++.|+||||++|+||++++||+||++||||+++..+...... +..+
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~---~~~~-- 136 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAV---CMDP-- 136 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCE---ESCT--
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccE---EcCC--
Confidence 45655444322 237888664322 368999999999999999999999999999997533222111 1111
Q ss_pred hhhhcccccCCcccCceeEEEEEEEccccceecc-cCCCCCCCccceeEEeCHhHHHHhh
Q 026407 145 VKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINL-LGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.+.....++|++.+...... .. .....+++|+.++.|++++++.+++
T Consensus 137 -----------~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~E~~~~~w~~~~el~~~~ 184 (212)
T 2dsc_A 137 -----------GLSNCTIHIVTVTINGDDAE-NARPKPKPGDGEFVEVISLPKNDLLQRL 184 (212)
T ss_dssp -----------TTBCCEEEEEEEEEETTSGG-GSSCCCCCCTTCCCEEEEEEGGGHHHHH
T ss_pred -----------CccCceEEEEEEEEeCcccc-ccCCCCCCCCCceEEEEEEEHHHHHHHH
Confidence 12233455555554432111 00 0112345688999999999999876
No 52
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.67 E-value=3.6e-16 Score=126.62 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=73.1
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcc
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
..+++++.+ ++ +|||++|.. +|.|.+|||++|+|||+++||+||++||||+++....... ...+.+++.
T Consensus 5 ~v~~~vi~~-~~-~vLL~~r~~-~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~~------ 73 (188)
T 3fk9_A 5 RVTNCIVVD-HD-QVLLLQKPR-RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKG--IFSMVIFDE------ 73 (188)
T ss_dssp EEEEEEEEE-TT-EEEEEECTT-TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEE--EEEEEEEET------
T ss_pred EEEEEEEEE-CC-EEEEEEeCC-CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEE--EEEEEecCC------
Confidence 344445554 55 999999865 5999999999999999999999999999999874322111 111221110
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
.........++|.+....... ....+..+++|++++++.++...+.. .++..+
T Consensus 74 -----~~~~~~~~~~~f~a~~~~~~~------~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~ 127 (188)
T 3fk9_A 74 -----GKIVSEWMLFTFKATEHEGEM------LKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHV 127 (188)
T ss_dssp -----TEEEEEEEEEEEEESCEESCC------CSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHH
T ss_pred -----CcceEEEEEEEEEEECCCCCC------cCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHH
Confidence 000001133444444322211 12234468999999999886533433 444433
No 53
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.67 E-value=1.4e-16 Score=130.15 Aligned_cols=110 Identities=19% Similarity=0.185 Sum_probs=72.4
Q ss_pred eeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQ 147 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 147 (239)
.+|++++++.+ ++||++|... ++.|+||||++|+||++++||+||++||||+++..+....... ..+
T Consensus 50 ~av~vl~~~~~--~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~---~~~----- 119 (198)
T 1vhz_A 50 EAVMIVPIVDD--HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLS---MAP----- 119 (198)
T ss_dssp CEEEEEEEETT--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEE---CCT-----
T ss_pred CEEEEEEEECC--EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEe---CCC-----
Confidence 36666667765 8888776433 2789999999999999999999999999999875443222111 111
Q ss_pred hcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhc
Q 026407 148 KLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVR 204 (239)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~ 204 (239)
.+.....++|++...... . ...+++|..++.|++++++.+++.
T Consensus 120 --------~~~~~~~~~f~a~~~~~~-~-----~~~~~~E~~~~~w~~~~el~~~~~ 162 (198)
T 1vhz_A 120 --------SYFSSKMNIVVAQDLYPE-S-----LEGDEPEPLPQVRWPLAHMMDLLE 162 (198)
T ss_dssp --------TTCCCEEEEEEEEEEEEC-C-----CCCCCSSCCCEEEEEGGGGGGGGG
T ss_pred --------CccCcEEEEEEEEeCCcc-c-----CCCCCCceEEEEEEEHHHHHHHHH
Confidence 112233444444332211 1 112355888999999999999883
No 54
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.67 E-value=1.4e-16 Score=130.81 Aligned_cols=125 Identities=12% Similarity=0.127 Sum_probs=78.1
Q ss_pred eeEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceee--eccCceeeecCchhhhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFL--AETPYWLTYDFPLKVKQK 148 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~--~~~~~~~~~~~~~~~~~~ 148 (239)
..|.++|++. + +|||++|. .|.|.||||++|+|||+.+||.||++||||+++.... ..... ..+.++.
T Consensus 71 ~~v~~vv~~~-~-~vLLvrr~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~-~~~~~~~----- 140 (206)
T 3o8s_A 71 LDTRAAIFQE-D-KILLVQEN--DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDK-HKNNPAK----- 140 (206)
T ss_dssp EEEEEEEEET-T-EEEEEECT--TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEH-HHHCC-------
T ss_pred ccEEEEEEEC-C-EEEEEEec--CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEec-cccCCCC-----
Confidence 4566677764 5 99999998 5999999999999999999999999999999874322 11110 0011110
Q ss_pred cccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhcC
Q 026407 149 LNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCLA 220 (239)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~~ 220 (239)
...+....+|.+..... ... .+.|+.+++|++++++.++...+.. +.+..+..+...
T Consensus 141 -------~~~~~~~~~~~~~~~~~--~~~------~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~ 198 (206)
T 3o8s_A 141 -------SAHRVTKVFILCRLLGG--EFQ------PNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRS 198 (206)
T ss_dssp ----------CEEEEEEEEEEEEE--CCC------CCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHC
T ss_pred -------CCceEEEEEEEEEecCC--eec------CCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHC
Confidence 00111233344443322 111 2358899999999999988743333 445555444443
No 55
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.67 E-value=1.5e-16 Score=132.03 Aligned_cols=118 Identities=22% Similarity=0.239 Sum_probs=75.6
Q ss_pred eeeEEEEEEeCCCCEEEEEEecCC----------------------------------CCcEEcCceecCC-CCCHHHHH
Q 026407 70 RRNVGICLINSSKKKIFAATRIHI----------------------------------PYTWQMPQGGADE-GEDLINAA 114 (239)
Q Consensus 70 ~~~v~v~i~~~~~~~vLl~~r~~~----------------------------------~~~w~~PgG~ve~-gEs~~~aa 114 (239)
+.+|++++++.+++++||+++... ++.|+||||++|+ |||+++||
T Consensus 36 ~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA 115 (218)
T 3q91_A 36 HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVA 115 (218)
T ss_dssp CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHHHHH
T ss_pred CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHHHHH
Confidence 468888888864448888765321 4789999999999 99999999
Q ss_pred HHHHHHHhCCcc--ceeeeccCceeeecCchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeE
Q 026407 115 LRELREETGVTS--AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWR 192 (239)
Q Consensus 115 ~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~ 192 (239)
+||++||||+++ ..+......+...+ +.+...++|++...... .........+++|+.++.
T Consensus 116 ~REl~EEtGl~~~~~~l~~l~~~~~~~g----------------~~~~~~~~f~a~~~~~~-~~~~~~~~~d~~E~~ev~ 178 (218)
T 3q91_A 116 CKEAWEECGYHLAPSDLRRVATYWSGVG----------------LTGSRQTMFYTEVTDAQ-RSGPGGGLVEEGELIEVV 178 (218)
T ss_dssp HHHHHHHHCBCCCGGGCEEEEEEEEC-------------------CCEEEEEEEEEECGGG-BCC---------CCEEEE
T ss_pred HHHHHHHhCCccccCceEEEEEEecCCC----------------ccceEEEEEEEEECCcc-cccCCCCCCCCCcEEEEE
Confidence 999999999997 44443332211111 12334555665554321 111111233456899999
Q ss_pred EeCHhHHHHhhc
Q 026407 193 WMFPEQVLERVR 204 (239)
Q Consensus 193 Wv~~eel~~~~~ 204 (239)
|++++++.+++.
T Consensus 179 wv~l~el~~~i~ 190 (218)
T 3q91_A 179 HLPLEGAQAFAD 190 (218)
T ss_dssp EEEGGGHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999999883
No 56
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.67 E-value=5.1e-17 Score=135.51 Aligned_cols=127 Identities=12% Similarity=0.065 Sum_probs=79.4
Q ss_pred ceeeEEEEEE--eCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchh
Q 026407 69 YRRNVGICLI--NSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLK 144 (239)
Q Consensus 69 ~~~~v~v~i~--~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 144 (239)
.+.+|+++|+ +.++.+|||++|... +|.|.+|||++|+|||+++||+||++||||+++..+.. ...+..+..
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~----l~~~~~~~r 87 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQ----VGAFGAIDR 87 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEE----EEEECCTTS
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEE----EEEeCCCCc
Confidence 3456666666 233349999999754 38999999999999999999999999999999753321 122222221
Q ss_pred hhhhcccccCCcccCce-eEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh--cchHH-HHHHHhhhh
Q 026407 145 VKQKLNRRWGTNYKGQA-QKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV--RKPCG-LIFRYFSPF 217 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~--~~~~~-~~~~~l~~~ 217 (239)
. ..+.. ...|.+..... ... ...+|..+++|++++++.++. ...+. .++..++..
T Consensus 88 ~-----------~~~~~v~~~y~a~~~~~--~~~-----~~~~e~~~~~W~~~~el~~l~~dh~~il~~a~~rlr~~ 146 (226)
T 2fb1_A 88 D-----------PGERVVSIAYYALININ--EYD-----RELVQKHNAYWVNINELPALIFDHPEMVDKAREMMKQK 146 (226)
T ss_dssp S-----------SSSCEEEEEEEEECCTT--SSC-----HHHHHHTTEEEEETTSCCCBSTTHHHHHHHHHHHHHHH
T ss_pred C-----------CCceEEEEEEEEEecCc--ccc-----cCCccccceEEEEHHHhhhccCCHHHHHHHHHHHHHhh
Confidence 0 00111 22333333321 111 123478899999999998765 33444 565666543
No 57
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.67 E-value=1.3e-15 Score=118.94 Aligned_cols=121 Identities=15% Similarity=0.203 Sum_probs=73.4
Q ss_pred ceeeEEEEEEeCC--CCEEEEEEecCC---CCcEEcCceecCCCCCHH-HHHHHHHHHHhC-CccceeeeccCceeeecC
Q 026407 69 YRRNVGICLINSS--KKKIFAATRIHI---PYTWQMPQGGADEGEDLI-NAALRELREETG-VTSAEFLAETPYWLTYDF 141 (239)
Q Consensus 69 ~~~~v~v~i~~~~--~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~-~aa~REl~EEtG-l~~~~~~~~~~~~~~~~~ 141 (239)
.+..+.++|.+.+ ++++||++|... +|+|+||||++|.||+++ +||.||+.|||| +++..+..... ..+.+
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~--~~~~~ 95 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGE--VVHTF 95 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCC--BCCBC
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecce--EEEec
Confidence 3444445555542 238999999754 389999999999999996 999999999999 77632221111 12222
Q ss_pred chhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 142 PLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
++ .....++|.+....... ...|..++.|++++++.++...+.. +++..+
T Consensus 96 ~~----------------~~~~~~~~~~~~~~~~~-------~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 146 (155)
T 1x51_A 96 SH----------------IKLTYQVYGLALEGQTP-------VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 146 (155)
T ss_dssp SS----------------CEEEEEEEEEECSSCCC-------CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHH
T ss_pred CC----------------ccEEEEEEEEEEcCCCC-------CCCCCCccEEccHHHhhhcCCCHHHHHHHHHH
Confidence 22 12222233332221111 1235678999999999987644433 555444
No 58
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.67 E-value=3.3e-17 Score=123.47 Aligned_cols=114 Identities=24% Similarity=0.270 Sum_probs=72.8
Q ss_pred EEEEEeCCCCEEEEEEecCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcc
Q 026407 74 GICLINSSKKKIFAATRIHI---PYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 74 ~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
++++++.++ ++||++|... +|.|+||||++++|||+.+||.||++||||+++..+..... ..+.+++.
T Consensus 8 ~~ii~~~~~-~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~--~~~~~~~~------ 78 (129)
T 1mut_A 8 VGIIRNENN-EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEK--LEYEFPDR------ 78 (129)
T ss_dssp CEECEETTT-EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCC--CBCCCSSC------
T ss_pred EEEEEecCC-EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEE--EEEecCCc------
Confidence 344567766 9999998764 39999999999999999999999999999998753321111 12222220
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHH
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRY 213 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~ 213 (239)
.....+|.+..... . ...+|..++.|++++++.++...+.. ++++.
T Consensus 79 --------~~~~~~~~~~~~~~--~-------~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 125 (129)
T 1mut_A 79 --------HITLWFWLVERWEG--E-------PWGKEGQPGEWMSLVGLNADDFPPANEPVIAK 125 (129)
T ss_dssp --------EEECCCEEEEECSS--C-------CCCCSSCCCEEEESSSCCTTTSCTTCHHHHHH
T ss_pred --------eEEEEEEEEEccCC--c-------cCCcccceeEEeCHHHcccccCCchhHHHHHH
Confidence 01122333333221 1 12347788999999999887533322 44443
No 59
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.66 E-value=4.9e-16 Score=121.09 Aligned_cols=122 Identities=15% Similarity=0.113 Sum_probs=71.5
Q ss_pred ceeeEEEEEEeCCCCE--EEEEEecCCC-CcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhh
Q 026407 69 YRRNVGICLINSSKKK--IFAATRIHIP-YTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKV 145 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~--vLl~~r~~~~-~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 145 (239)
.+..+++++.+.++.+ +|+++|...+ ..|.||||++|+|||+++||+||++||||+++...... ....+.+++
T Consensus 7 ~~~~~~~ii~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~--~~~~~~~~~-- 82 (155)
T 2b06_A 7 TILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLV--GIKNWPLDT-- 82 (155)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEE--EEEEEECTT--
T ss_pred cEEEEEEEEEECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcEE--EEEeeccCC--
Confidence 4456666777643222 8888887543 23899999999999999999999999999987432211 111111111
Q ss_pred hhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcchHH-HHHHHh
Q 026407 146 KQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYF 214 (239)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l 214 (239)
+.....+++.+...... . ...|..+++|++++++.++...+.. .++..+
T Consensus 83 -------------~~~~~~~~~~~~~~~~~--~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 132 (155)
T 2b06_A 83 -------------GGRYIVICYKATEFSGT--L-----QSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMM 132 (155)
T ss_dssp -------------SCEEEEEEEEECEEEEC--C-----CCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHH
T ss_pred -------------CceEEEEEEEEEecCCC--C-----CCCcceeeEEeeHHHhhhCCCChhHHHHHHHH
Confidence 11223333333322111 1 1247789999999999987644433 444433
No 60
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.66 E-value=2e-16 Score=129.99 Aligned_cols=112 Identities=20% Similarity=0.256 Sum_probs=70.3
Q ss_pred eeEEEEEEeCCCCEEEEEEecCC---CCcEEcCceecC-CCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhh
Q 026407 71 RNVGICLINSSKKKIFAATRIHI---PYTWQMPQGGAD-EGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVK 146 (239)
Q Consensus 71 ~~v~v~i~~~~~~~vLl~~r~~~---~~~w~~PgG~ve-~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
.+|++++++.++ ++||++|... ++.|+||||++| +|||+++||+||++||||+++..+...... +.++.
T Consensus 44 ~av~v~i~~~~~-~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~---~~~~~--- 116 (207)
T 1mk1_A 44 GAVAIVAMDDNG-NIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDL---DTAPG--- 116 (207)
T ss_dssp CEEEEEECCTTS-EEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE---CSCTT---
T ss_pred CEEEEEEEcCCC-EEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEE---EcCCC---
Confidence 467777787776 8999877543 379999999999 999999999999999999987544222111 22221
Q ss_pred hhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 147 QKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
+.....++|++......... ...+++|+.++.|++++++.++.
T Consensus 117 ----------~~~~~~~~f~~~~~~~~~~~----~~~~~~E~~~~~Wv~~~el~~~~ 159 (207)
T 1mk1_A 117 ----------FSDESVRVYLATGLREVGRP----EAHHEEADMTMGWYPIAEAARRV 159 (207)
T ss_dssp ----------TBCCCEEEEEEEEEEECCC--------------CEEEEEHHHHHHHH
T ss_pred ----------ccccEEEEEEEEccccCCCC----CCCCCCceEEEEEEEHHHHHHHH
Confidence 11223444544432211110 01234588999999999999987
No 61
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.65 E-value=4.7e-16 Score=130.76 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=77.4
Q ss_pred eeEEEEEE--eCCCCEEEEEEecCC--CCcEEcCceecCC--CCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchh
Q 026407 71 RNVGICLI--NSSKKKIFAATRIHI--PYTWQMPQGGADE--GEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLK 144 (239)
Q Consensus 71 ~~v~v~i~--~~~~~~vLl~~r~~~--~~~w~~PgG~ve~--gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 144 (239)
.+|.++|+ +.++.+|||++|... +|.|.+|||++|+ |||+++||+||++||||+++..+... ..+..+..
T Consensus 23 v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l----~~~~~~~r 98 (240)
T 3gz5_A 23 LTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQL----CTVGNNSR 98 (240)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEE----EEEEESSS
T ss_pred cEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeE----EEeCCCcc
Confidence 45555555 444448999998754 3899999999999 99999999999999999987543321 12222221
Q ss_pred hhhhcccccCCcccCc-eeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHh--h--cchHH-HHHHHhhhhh
Q 026407 145 VKQKLNRRWGTNYKGQ-AQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLER--V--RKPCG-LIFRYFSPFC 218 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~--~--~~~~~-~~~~~l~~~~ 218 (239)
. . .+. ....|.+.+... .... ..+|+.++.|++++++... . .+.+. .++..++..+
T Consensus 99 ~----------~-~~~~~~~~y~a~~~~~--~~~~-----~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl 160 (240)
T 3gz5_A 99 D----------A-RGWSVTVCYTALMSYQ--ACQI-----QIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKA 160 (240)
T ss_dssp S----------T-TSCEEEEEEEEECCHH--HHHH-----HHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHH
T ss_pred C----------C-CceEEEEEEEEEeccc--ccCC-----CCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhc
Confidence 0 0 011 122333333322 1111 1237789999999999742 2 34444 5666665543
No 62
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.65 E-value=4e-16 Score=128.42 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=77.4
Q ss_pred CCCceeeEEEEEEeCCCCEEEEEEecCCC------CcEEc-CceecCCCCC------HHHHHHHHHHHHhCCccceeeec
Q 026407 66 PDGYRRNVGICLINSSKKKIFAATRIHIP------YTWQM-PQGGADEGED------LINAALRELREETGVTSAEFLAE 132 (239)
Q Consensus 66 ~~~~~~~v~v~i~~~~~~~vLl~~r~~~~------~~w~~-PgG~ve~gEs------~~~aa~REl~EEtGl~~~~~~~~ 132 (239)
...++..+..+++..++ ++|+.+|...+ |.|.+ |||++|+||| +++||+||++||||+++..+...
T Consensus 63 d~~~~q~i~~~II~~~g-rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~i 141 (211)
T 3e57_A 63 DETTKQVIPYVVIMDGD-RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFL 141 (211)
T ss_dssp CTTEEEEEEEEEEEETT-EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccceEEEEEEEECC-EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEE
Confidence 34577777777777766 99999997543 68999 9999999998 49999999999999986433211
Q ss_pred cCceeeecCchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh-cch-HH-H
Q 026407 133 TPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV-RKP-CG-L 209 (239)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~-~~~-~~-~ 209 (239)
....+..... +.....++|.+..... .. .+.|..+++|+++++|.++. .-+ -- .
T Consensus 142 --g~~~~~~~~~--------------~~~~l~~~f~~~~~~g--~~-----~~~E~~~~~W~~~~eL~~~~~~le~wS~l 198 (211)
T 3e57_A 142 --GLINSSTTEV--------------SRVHLGALFLGRGKFF--SV-----KEKDLFEWELIKLEELEKFSGVMEGWSKI 198 (211)
T ss_dssp --EEEECCSSHH--------------HHTEEEEEEEEEEEEE--EE-----SCTTTCEEEEEEHHHHHHHGGGCCHHHHH
T ss_pred --EEEeccCCCC--------------CeEEEEEEEEEEeCCc--ee-----CCCCeEEEEEEEHHHHHHhHhhccchhHH
Confidence 1222211110 0011112222222111 12 12367899999999999984 211 12 5
Q ss_pred HHHHhhhhhc
Q 026407 210 IFRYFSPFCL 219 (239)
Q Consensus 210 ~~~~l~~~~~ 219 (239)
+++.+.+|+.
T Consensus 199 vl~~l~~~~~ 208 (211)
T 3e57_A 199 SAAVLLNLFL 208 (211)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 6667766654
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.65 E-value=1.1e-15 Score=133.93 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=71.0
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCcccee--eeccCceeeecCchh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEF--LAETPYWLTYDFPLK 144 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~ 144 (239)
.+.+|++++++ ++ ++||++|... +|.|++|||++|+|||+++||+||++||||+++... .+.......+.+++.
T Consensus 202 ~~~~v~~vi~~-~~-~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 279 (341)
T 2qjo_A 202 TFITTDAVVVQ-AG-HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDAPGR 279 (341)
T ss_dssp CEEEEEEEEEE-TT-EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECCTTS
T ss_pred CceEEEEEEEe-CC-EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeCCCC
Confidence 34566666664 45 8999998754 389999999999999999999999999999987422 211111223443331
Q ss_pred hhhhcccccCCcccC-ceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHh
Q 026407 145 VKQKLNRRWGTNYKG-QAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLER 202 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 202 (239)
. ..+ ....+|++...... .. ...+++|+.+++|++++++.++
T Consensus 280 ~-----------~~~~~~~~~f~~~~~~~~--~~---~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 280 S-----------LRGRTITHAYFIQLPGGE--LP---AVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp C-----------TTSCEEEEEEEEECCSSS--CC---CCC------CEEEEEHHHHHHT
T ss_pred C-----------CCCcEEEEEEEEEecCCC--cC---ccCCCCceeeEEEeeHHHHhhh
Confidence 1 011 12344555443221 10 1123458899999999999986
No 64
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.64 E-value=1.5e-15 Score=120.35 Aligned_cols=55 Identities=25% Similarity=0.413 Sum_probs=43.0
Q ss_pred eEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCcccee
Q 026407 72 NVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEF 129 (239)
Q Consensus 72 ~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 129 (239)
.+++++++.++ ++||++|.. |.|.+|||++|+|||+++||+||++||||+++..+
T Consensus 17 ~~~~~ii~~~~-~vLL~~r~~--g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 71 (163)
T 3f13_A 17 RRATAIIEMPD-GVLVTASRG--GRYNLPGGKANRGELRSQALIREIREETGLRINSM 71 (163)
T ss_dssp EEEEEECEETT-EEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEE
T ss_pred EEEEEEEEeCC-EEEEEEECC--CeEECCceeCCCCCCHHHHHHHHHHHHHCccccee
Confidence 33444445555 899888864 89999999999999999999999999999997543
No 65
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.64 E-value=3e-15 Score=132.99 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=80.4
Q ss_pred CCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCccceeeeccCceeeecCchhhhhhcccccCCcccC
Q 026407 80 SSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKG 159 (239)
Q Consensus 80 ~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
.++.+|||++|.. .|.|+||||++|+|||+++||+||++||||+++...... ....+.+++... .....+......
T Consensus 35 ~~~~~vLLv~r~~-~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l--~~~~~~~~~~g~-~~~~~~~~~~~~ 110 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYL--CEVEYPLSEEGK-KTRHSHDCTADT 110 (364)
T ss_dssp HTTEEEEEEEETT-TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEE--EEEC---------------------
T ss_pred CCceEEEEEEcCC-CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeecccc--ceEEEeccCCCc-ccccccccccCc
Confidence 3444899999865 389999999999999999999999999999987432211 112222221100 000000000112
Q ss_pred ceeEEEEEEEccccceec----ccCC-CCCCCccceeEEeCHhHHHHhhcchHH-HHHHHhhhhhcC
Q 026407 160 QAQKWFLFKFTGKEEEIN----LLGD-GSEKPEFNEWRWMFPEQVLERVRKPCG-LIFRYFSPFCLA 220 (239)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~----~~~~-~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~l~~~~~~ 220 (239)
....+|++........+. +.+. ..+.+|+.+++|++++++.++...+.. .+++.+..++..
T Consensus 111 ~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~r~il~~~~~~l~~ 177 (364)
T 3fjy_A 111 KHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQE 177 (364)
T ss_dssp -CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcchhhHHHHHHHHHHhcc
Confidence 345666666554321000 1111 234568999999999999998855555 677777666654
No 66
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.63 E-value=2.7e-15 Score=132.17 Aligned_cols=117 Identities=19% Similarity=0.241 Sum_probs=75.0
Q ss_pred ceeeEEEEEEeCCCCEEEEEEecCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhCCcccee--eeccCceeeecCchh
Q 026407 69 YRRNVGICLINSSKKKIFAATRIHI--PYTWQMPQGGADEGEDLINAALRELREETGVTSAEF--LAETPYWLTYDFPLK 144 (239)
Q Consensus 69 ~~~~v~v~i~~~~~~~vLl~~r~~~--~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~ 144 (239)
.+.+|++++++ ++ ++||++|... +|.|++|||++|+|||+++||+||++||||+++... .+.......+.+++.
T Consensus 207 ~~~~v~~vv~~-~~-~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~ 284 (352)
T 2qjt_B 207 NFVTVDALVIV-ND-HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDR 284 (352)
T ss_dssp EEEEEEEEEEE-TT-EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTS
T ss_pred CceEEEEEEEE-CC-EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCC
Confidence 34556666664 45 8999988754 389999999999999999999999999999987421 111111223444331
Q ss_pred hhhhcccccCCcccC-ceeEEEEEEEccccceecccCCCCCCCccceeEEeCH-hHHHHh
Q 026407 145 VKQKLNRRWGTNYKG-QAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFP-EQVLER 202 (239)
Q Consensus 145 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~-eel~~~ 202 (239)
. ..+ .....|++.+....... ...+.+|+.+++|+++ +++.++
T Consensus 285 ~-----------~~~~~~~~~f~~~~~~~~~~~----~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 285 S-----------VRGRTISHVGLFVFDQWPSLP----EINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp C-----------TTSEEEEEEEEEEECSCSSCC----CCCCCTTEEEEEEEESSHHHHHT
T ss_pred C-----------CCccEEEEEEEEEEeCCCCCC----ccCCCccceEEEEecHHHHHHhh
Confidence 1 001 12334555543321001 1123468899999999 999986
No 67
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.57 E-value=1.5e-14 Score=123.82 Aligned_cols=108 Identities=21% Similarity=0.295 Sum_probs=68.6
Q ss_pred eeeEEEEEEe--CC--CCEEEEEEecCCC--CcEEcCceecCCCCCHHHHHHHHHHHHhCCccc--eeeeccCceeeecC
Q 026407 70 RRNVGICLIN--SS--KKKIFAATRIHIP--YTWQMPQGGADEGEDLINAALRELREETGVTSA--EFLAETPYWLTYDF 141 (239)
Q Consensus 70 ~~~v~v~i~~--~~--~~~vLl~~r~~~~--~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~~~~~~~~~~~ 141 (239)
..+|.++|+. .+ +.+|||++|...+ |.|.+|||++|+|||+++||+||++||||+++. .+. ....+..
T Consensus 39 ~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~----~l~~~~~ 114 (273)
T 2fml_A 39 SLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIE----QLHSFSR 114 (273)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEE----EEEEECC
T ss_pred ceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEE----EEEEEcC
Confidence 3456555553 32 3389999987643 899999999999999999999999999997652 232 1223333
Q ss_pred chhhhhhcccccCCcccC-ceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHH
Q 026407 142 PLKVKQKLNRRWGTNYKG-QAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVL 200 (239)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~ 200 (239)
+... ..+ .....|++.+.... ....+|..++.|++++++.
T Consensus 115 ~~r~-----------~~~~~~~~~y~a~~~~~~--------~~~~~E~~~~~W~~~~e~~ 155 (273)
T 2fml_A 115 PDRD-----------PRGWVVTVSYLAFIGEEP--------LIAGDDAKEVHWFNLERHG 155 (273)
T ss_dssp TTSS-----------TTSSEEEEEEEEECCCCC--------CCCCTTEEEEEEEEEEEET
T ss_pred CCCC-----------CCceEEEEEEEEEeCCCC--------CCCCcceeeEEEEEhhHhh
Confidence 3211 001 12334444333221 1234588899999999753
No 68
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.54 E-value=9.4e-14 Score=116.37 Aligned_cols=116 Identities=19% Similarity=0.266 Sum_probs=74.7
Q ss_pred CceeeEEEEEEeCCCCEEEEEEecCC----CCcEEcC-ceecCCC------CC---HHHHHHHHHHHHhCCcccee----
Q 026407 68 GYRRNVGICLINSSKKKIFAATRIHI----PYTWQMP-QGGADEG------ED---LINAALRELREETGVTSAEF---- 129 (239)
Q Consensus 68 ~~~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~g------Es---~~~aa~REl~EEtGl~~~~~---- 129 (239)
.++.++.+++++.++ ++||++|... +|.|.+| ||+++.| |+ +++||+||++||||+++..+
T Consensus 57 ~~h~av~v~v~~~~g-~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~ 135 (235)
T 2dho_A 57 LLHRAFSVFLFNTEN-KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEE 135 (235)
T ss_dssp CCEEEEEEEEECTTC-CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGG
T ss_pred ceEEEEEEEEEcCCC-EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhh
Confidence 367788888998877 8999999643 4899999 5999999 87 59999999999999986422
Q ss_pred -eeccCceeeecCchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 130 -LAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.... .+.|..+.. ..| ......++|.+.. . ..+.. ..+|+.+++|++++++.+++
T Consensus 136 l~~l~--~~~y~~~~~------~~~---~~~e~~~vf~~~~--~-~~~~~-----~~~Ev~~~~wv~~~el~~~l 191 (235)
T 2dho_A 136 INYLT--RIHYKAQSD------GIW---GEHEIDYILLVRM--N-VTLNP-----DPNEIKSYCYVSKEELKELL 191 (235)
T ss_dssp SEEEE--EEEEEEECS------SSB---EEEEEEEEEEEEC--C-CCCCC-----CTTTEEEEEEECHHHHHHHH
T ss_pred cEEEE--EEEEeccCC------Ccc---ceeEEEEEEEEEE--C-CCCcC-----ChHHEEEEEEEcHHHHHHHH
Confidence 1111 111221110 000 0011123333332 1 12222 34599999999999999876
No 69
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.52 E-value=1.1e-13 Score=116.72 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=74.9
Q ss_pred CceeeEEEEEEeCCCCEEEEEEecCC----CCcEEcCc-eecCCC------CCH---HHHHHHHHHHHhCCcccee----
Q 026407 68 GYRRNVGICLINSSKKKIFAATRIHI----PYTWQMPQ-GGADEG------EDL---INAALRELREETGVTSAEF---- 129 (239)
Q Consensus 68 ~~~~~v~v~i~~~~~~~vLl~~r~~~----~~~w~~Pg-G~ve~g------Es~---~~aa~REl~EEtGl~~~~~---- 129 (239)
.++.++.+++++.++ ++||++|... +|.|.+|+ |++++| |++ ++||+||++||||+++..+
T Consensus 68 ~~h~av~v~v~~~~g-~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~ 146 (246)
T 2pny_A 68 LLHRAFSVVLFNTKN-RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPED 146 (246)
T ss_dssp CCEEEEEEEEECTTC-CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGG
T ss_pred cEEEEEEEEEEeCCC-EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccc
Confidence 467788888898877 8999999643 58999995 999999 886 9999999999999986422
Q ss_pred -eeccCceeeecCchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh
Q 026407 130 -LAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV 203 (239)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~ 203 (239)
.... .+.|..+.. ..+ +.....++|.+... ..+.. ..+|+.+++|++++++.+++
T Consensus 147 l~~l~--~~~y~~~~~----------~~~-~~~e~~~vf~~~~~-~~~~~-----~~~Ev~~~~wv~~eel~~~l 202 (246)
T 2pny_A 147 IVFMT--IYHHKAKSD----------RIW-GEHEICYLLLVRKN-VTLNP-----DPSETKSILYLSQEELWELL 202 (246)
T ss_dssp SEEEE--EEEEEEESS----------SSB-EEEEEEEEEEEECC-CCCCC-----CTTTEEEEEEECHHHHHHHH
T ss_pred cEEEE--EEEEEecCC----------Cce-eeeEEEEEEEEEEC-CCCCC-----ChHHeeEEEEEeHHHHHHHH
Confidence 1111 111221110 000 11112223333321 12222 34599999999999999876
No 70
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.49 E-value=1.7e-14 Score=119.03 Aligned_cols=48 Identities=25% Similarity=0.302 Sum_probs=42.1
Q ss_pred EeCCCCEEEEEEecCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhCCccce
Q 026407 78 INSSKKKIFAATRIHIPYTWQMPQGGADEGE-DLINAALRELREETGVTSAE 128 (239)
Q Consensus 78 ~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~ 128 (239)
++.++ ++||++|. +|.|+||||++|+|| |+++||+||++||||+++..
T Consensus 52 ~~~~~-~vLl~~r~--~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~ 100 (212)
T 1u20_A 52 VPIRR-VLLMMMRF--DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALAT 100 (212)
T ss_dssp EECCE-EEEEEEET--TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGG
T ss_pred EecCC-EEEEEEeC--CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccc
Confidence 45555 89999984 599999999999999 99999999999999998753
No 71
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.46 E-value=2.4e-13 Score=117.35 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=38.5
Q ss_pred EEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCCc
Q 026407 84 KIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVT 125 (239)
Q Consensus 84 ~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~ 125 (239)
++||++|... |.|.+|||++|+||++++||+||++||||+.
T Consensus 140 ~vLl~~r~~~-g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 140 QFVAIKRKDC-GEWAIPGGMVDPGEKISATLKREFGEEALNS 180 (292)
T ss_dssp EEEEEECTTT-CSEECCCEECCTTCCHHHHHHHHHHHHHSCG
T ss_pred EEEEEEecCC-CcEeCCCcccCCCCCHHHHHHHHHHHHhCCc
Confidence 6999998764 8999999999999999999999999999998
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=9.6e-13 Score=109.92 Aligned_cols=58 Identities=29% Similarity=0.412 Sum_probs=48.2
Q ss_pred ceeeEEEEEEeCC--C-CEEEEEEecCC----CCcEEcCceecCCCCC--------------------HHHHHHHHHHHH
Q 026407 69 YRRNVGICLINSS--K-KKIFAATRIHI----PYTWQMPQGGADEGED--------------------LINAALRELREE 121 (239)
Q Consensus 69 ~~~~v~v~i~~~~--~-~~vLl~~r~~~----~~~w~~PgG~ve~gEs--------------------~~~aa~REl~EE 121 (239)
.|+++++++++.+ + .+|||.+|... +|.|.||||++|++|+ +.+||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 6777777776543 2 48999999754 4899999999999986 599999999999
Q ss_pred hCCcc
Q 026407 122 TGVTS 126 (239)
Q Consensus 122 tGl~~ 126 (239)
||+..
T Consensus 87 ~Gl~l 91 (232)
T 3qsj_A 87 IGWLL 91 (232)
T ss_dssp HSCCC
T ss_pred hCcee
Confidence 99986
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.40 E-value=2.3e-12 Score=111.31 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=77.5
Q ss_pred ceeeEEEEEEeCCC--CEEEEEEecCC----CCcE-EcCceecCCCCCHHHHHHHHHHHHhCCccceeee-ccCceeeec
Q 026407 69 YRRNVGICLINSSK--KKIFAATRIHI----PYTW-QMPQGGADEGEDLINAALRELREETGVTSAEFLA-ETPYWLTYD 140 (239)
Q Consensus 69 ~~~~v~v~i~~~~~--~~vLl~~r~~~----~~~w-~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~ 140 (239)
.+..|-+.+++.++ .++||+||... ||+| .+++|++++||++++||+||+.||+|++...+.. .....++|.
T Consensus 117 ~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~ 196 (300)
T 3dup_A 117 RAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYC 196 (300)
T ss_dssp CEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEE
Confidence 55677777777654 38999999643 5999 6999999999999999999999999998632210 001122332
Q ss_pred CchhhhhhcccccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhhcc
Q 026407 141 FPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERVRK 205 (239)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~ 205 (239)
+... .++ +....++|.+.... +..+ ...++|+.+++|++++|+.+++..
T Consensus 197 ~~~~----------~G~--~~E~~~vy~~~l~~-~~~p---~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 197 MESP----------AGI--KPDTLFLYDLALPE-DFRP---HNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp EEET----------TEE--EEEEEEEEEEECCT-TCCC---CCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred EecC----------CCe--EEEEEEEEEEEecC-CCcC---CCCchHhheEEEECHHHHHHHHhc
Confidence 2110 011 12233444333221 1111 124569999999999999998744
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.32 E-value=1.6e-12 Score=107.52 Aligned_cols=101 Identities=20% Similarity=0.143 Sum_probs=61.1
Q ss_pred EEEEEEecCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhCCcccee-eeccCceeeecCchhhhhhcccccCCcccCce
Q 026407 84 KIFAATRIHIPYTWQMPQGGADEGE-DLINAALRELREETGVTSAEF-LAETPYWLTYDFPLKVKQKLNRRWGTNYKGQA 161 (239)
Q Consensus 84 ~vLl~~r~~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (239)
++|++.|. +|.|+||||++|+|| |+++||+||++||||+++... +.....+..+.. ......
T Consensus 66 ~~ll~~r~--~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~--------------~~~~~~ 129 (217)
T 2xsq_A 66 AILMQMRF--DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVG--------------SGPRVV 129 (217)
T ss_dssp EEEEEEET--TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEC--------------SSSSEE
T ss_pred cEEEEEcc--CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCC--------------CCCeEE
Confidence 46666665 489999999999999 999999999999999987521 111111222111 001223
Q ss_pred eEEEEEEEccccce-ec--ccCCCCCCCccceeEEeCHhHHH
Q 026407 162 QKWFLFKFTGKEEE-IN--LLGDGSEKPEFNEWRWMFPEQVL 200 (239)
Q Consensus 162 ~~~~~~~~~~~~~~-~~--~~~~~~~~~E~~~~~Wv~~eel~ 200 (239)
..+|...+...... .. ........+|..++.|++++++.
T Consensus 130 ~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 130 AHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 44555554432110 00 00011224588999999999987
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.00 E-value=1.3e-10 Score=93.17 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=44.9
Q ss_pred CCceeeEEEEEEeCCCC----------EEEEEEecCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhCC
Q 026407 67 DGYRRNVGICLINSSKK----------KIFAATRIHIPYTWQMPQGGADEGE-DLINAALRELREETGV 124 (239)
Q Consensus 67 ~~~~~~v~v~i~~~~~~----------~vLl~~r~~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl 124 (239)
.+++.++-+++..++.. .+|++.|.+ |.|+||||+||+|| |+++|+.||+.||+|+
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~--G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFD--GLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETT--SCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeeeC--CEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 45778887777655421 367788876 99999999999999 9999999999999997
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.00 E-value=1.8e-09 Score=94.08 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=63.6
Q ss_pred eEEEEEEeCCCCEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHh-CCccceeeeccCceeeecCchhhhhhcc
Q 026407 72 NVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREET-GVTSAEFLAETPYWLTYDFPLKVKQKLN 150 (239)
Q Consensus 72 ~v~v~i~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEt-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
.|++++.+ ++ +|||+ . ..| |.+|||.++.+++ ++|+||++||| |+++. +.... --|..+.
T Consensus 185 ~vgaii~~-~g-~vLL~--~-~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~-~~~L~---~v~~~~~------- 245 (321)
T 3rh7_A 185 RLGAVLEQ-QG-AVFLA--G-NET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVT-IGFLY---SVYEDKS------- 245 (321)
T ss_dssp EEEEEEES-SS-CEEEB--C-SSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEE-EEEEE---EEEECTT-------
T ss_pred eEEEEEEE-CC-EEEEe--e-CCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEe-eceEE---EEEEcCC-------
Confidence 44445554 55 88888 2 237 9999886654444 59999999997 99973 11111 1122211
Q ss_pred cccCCcccCceeEEEEEEEccccceecccCCCCCCCccceeEEeCHhHHHHhh-cchHH-HHHHHh-hhhhcCCCccccc
Q 026407 151 RRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWRWMFPEQVLERV-RKPCG-LIFRYF-SPFCLAPFMIYLK 227 (239)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~-~~~~~-~~~~~l-~~~~~~~~~~~l~ 227 (239)
.++...+|.+...+. +..+++|+++++|+... ..+.. .+++.+ ++.-...|..|..
T Consensus 246 -------~~~~~i~f~~~~~~g--------------~~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~i~~g 304 (321)
T 3rh7_A 246 -------DGRQNIVYHALASDG--------------APRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFGIYFG 304 (321)
T ss_dssp -------TCCEEEEEEEEECSS--------------CCSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC----
T ss_pred -------CceEEEEEEEEeCCC--------------CeeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCCceec
Confidence 122333455544332 12679999999999865 34544 333333 3333334444544
Q ss_pred c
Q 026407 228 E 228 (239)
Q Consensus 228 ~ 228 (239)
+
T Consensus 305 ~ 305 (321)
T 3rh7_A 305 D 305 (321)
T ss_dssp -
T ss_pred C
Confidence 3
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.98 E-value=1.1e-09 Score=88.58 Aligned_cols=55 Identities=22% Similarity=0.356 Sum_probs=43.7
Q ss_pred CceeeEEEE-EEeCCC-CEEEEEEecCCCCcEEcCceecCCCCCHHHHHHHHHHHHhCC
Q 026407 68 GYRRNVGIC-LINSSK-KKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV 124 (239)
Q Consensus 68 ~~~~~v~v~-i~~~~~-~~vLl~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl 124 (239)
+.|..|.++ +++..+ .+|||.++.. +.|.+|||++|+||+.++|+.||+.||+|+
T Consensus 56 g~R~sV~avil~~~~~~phVLLlq~~~--~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 56 GMRRTVEGVLIVHEHRLPHVLLLQLGT--TFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEEET--TEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEcCCCCcEEEEEEcCC--CcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 345555544 444433 3799988854 799999999999999999999999999995
Done!