Query 026410
Match_columns 239
No_of_seqs 175 out of 1275
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 12:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 2.4E-57 8.2E-62 419.8 16.0 179 35-213 2-184 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 1.6E-47 5.3E-52 358.5 19.2 181 32-212 24-208 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 1.3E-46 4.5E-51 349.5 17.6 181 32-212 10-192 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 1.3E-45 4.4E-50 342.5 20.0 174 34-207 3-176 (370)
5 1p4c_A L(+)-mandelate dehydrog 100.0 9E-46 3.1E-50 344.9 19.0 174 33-207 3-176 (380)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 5.6E-45 1.9E-49 351.3 19.0 182 23-207 113-300 (511)
7 2qr6_A IMP dehydrogenase/GMP r 99.8 1.2E-21 4.1E-26 182.1 -3.5 131 46-185 13-160 (393)
8 1vcf_A Isopentenyl-diphosphate 99.7 7.5E-19 2.6E-23 160.0 0.7 126 54-190 8-155 (332)
9 3r2g_A Inosine 5'-monophosphat 99.5 5.9E-15 2E-19 136.8 7.9 114 72-196 8-125 (361)
10 3sr7_A Isopentenyl-diphosphate 99.5 8.6E-15 3E-19 135.8 8.7 115 72-190 54-178 (365)
11 1p0k_A Isopentenyl-diphosphate 99.5 1.3E-14 4.6E-19 132.5 8.4 131 55-192 9-152 (349)
12 3vkj_A Isopentenyl-diphosphate 99.3 3E-12 1E-16 118.8 7.7 120 71-190 26-158 (368)
13 1ypf_A GMP reductase; GUAC, pu 99.1 6.2E-12 2.1E-16 114.8 1.2 115 65-188 7-128 (336)
14 1eep_A Inosine 5'-monophosphat 99.0 4E-10 1.4E-14 104.8 5.5 73 72-152 10-84 (404)
15 2c6q_A GMP reductase 2; TIM ba 98.9 1.4E-09 4.9E-14 100.0 6.9 115 66-189 14-141 (351)
16 1gte_A Dihydropyrimidine dehyd 98.0 1.7E-05 5.9E-10 81.5 10.4 108 80-193 521-674 (1025)
17 3khj_A Inosine-5-monophosphate 97.4 0.00053 1.8E-08 63.1 9.1 100 73-187 14-124 (361)
18 1f76_A Dihydroorotate dehydrog 97.3 0.00015 5.2E-09 65.2 3.9 42 89-137 42-83 (336)
19 4fo4_A Inosine 5'-monophosphat 96.7 0.0042 1.4E-07 57.3 8.5 106 73-188 15-128 (366)
20 2e6f_A Dihydroorotate dehydrog 96.7 0.0065 2.2E-07 53.8 9.3 97 90-193 2-135 (314)
21 1ep3_A Dihydroorotate dehydrog 96.5 0.0032 1.1E-07 55.3 5.9 100 87-193 2-138 (311)
22 1vhn_A Putative flavin oxidore 96.0 0.0059 2E-07 54.6 4.9 89 100-196 2-99 (318)
23 1jub_A Dihydroorotate dehydrog 95.7 0.079 2.7E-06 46.7 10.6 95 92-193 2-133 (311)
24 2z6i_A Trans-2-enoyl-ACP reduc 94.7 0.068 2.3E-06 47.9 7.4 87 94-191 6-99 (332)
25 2gjl_A Hypothetical protein PA 94.6 0.17 5.7E-06 45.1 9.4 89 94-191 9-107 (328)
26 3tjx_A Dihydroorotate dehydrog 94.3 0.058 2E-06 48.8 5.8 44 87-136 32-75 (354)
27 1wv2_A Thiazole moeity, thiazo 93.0 0.033 1.1E-06 49.3 1.7 56 152-207 100-162 (265)
28 3b0p_A TRNA-dihydrouridine syn 92.1 0.37 1.3E-05 43.6 7.6 86 101-193 2-96 (350)
29 3bw2_A 2-nitropropane dioxygen 90.7 1.3 4.6E-05 39.9 9.8 84 102-191 10-133 (369)
30 1ea0_A Glutamate synthase [NAD 90.5 0.16 5.6E-06 54.3 3.9 63 73-141 824-888 (1479)
31 3ffs_A Inosine-5-monophosphate 88.7 0.49 1.7E-05 44.0 5.3 70 73-150 11-82 (400)
32 3bo9_A Putative nitroalkan dio 88.2 2.3 7.8E-05 37.9 9.2 83 100-191 24-113 (326)
33 4ef8_A Dihydroorotate dehydrog 87.4 1.8 6.1E-05 39.5 8.1 107 80-193 25-168 (354)
34 1ofd_A Ferredoxin-dependent gl 83.9 0.63 2.1E-05 50.0 3.6 63 74-142 842-906 (1520)
35 3oix_A Putative dihydroorotate 83.9 8.1 0.00028 34.9 10.6 97 90-193 36-168 (345)
36 1z41_A YQJM, probable NADH-dep 76.2 14 0.00047 32.8 9.4 22 93-114 8-29 (338)
37 1vyr_A Pentaerythritol tetrani 73.1 26 0.0009 31.5 10.5 46 94-139 9-57 (364)
38 2gou_A Oxidoreductase, FMN-bin 71.6 16 0.00055 33.0 8.7 45 94-138 9-56 (365)
39 2r91_A 2-keto-3-deoxy-(6-phosp 63.3 30 0.001 29.9 8.5 82 104-188 5-98 (286)
40 2ehh_A DHDPS, dihydrodipicolin 62.6 37 0.0013 29.4 9.0 82 104-188 7-103 (294)
41 2r14_A Morphinone reductase; H 61.8 44 0.0015 30.2 9.6 44 93-138 14-60 (377)
42 3l21_A DHDPS, dihydrodipicolin 60.8 43 0.0015 29.3 9.1 84 103-188 20-118 (304)
43 3glc_A Aldolase LSRF; TIM barr 60.4 48 0.0016 29.2 9.3 62 123-188 193-258 (295)
44 3zwt_A Dihydroorotate dehydrog 60.3 6.5 0.00022 35.8 3.7 44 64-109 24-67 (367)
45 4af0_A Inosine-5'-monophosphat 60.3 12 0.00041 36.3 5.6 109 73-190 61-178 (556)
46 2yxg_A DHDPS, dihydrodipicolin 60.3 38 0.0013 29.3 8.6 82 104-188 7-103 (289)
47 3fkr_A L-2-keto-3-deoxyarabona 59.6 47 0.0016 29.1 9.2 88 103-193 13-114 (309)
48 3cpr_A Dihydrodipicolinate syn 59.6 60 0.002 28.3 9.8 84 103-188 21-119 (304)
49 3a5f_A Dihydrodipicolinate syn 59.1 44 0.0015 28.9 8.8 83 104-188 8-104 (291)
50 1o5k_A DHDPS, dihydrodipicolin 59.0 36 0.0012 29.8 8.2 84 103-188 18-115 (306)
51 3s5o_A 4-hydroxy-2-oxoglutarat 57.9 55 0.0019 28.6 9.3 83 104-188 20-117 (307)
52 1xky_A Dihydrodipicolinate syn 57.0 57 0.002 28.4 9.2 84 104-188 18-115 (301)
53 2v9d_A YAGE; dihydrodipicolini 56.3 63 0.0022 28.8 9.5 85 103-188 36-134 (343)
54 3b4u_A Dihydrodipicolinate syn 56.1 59 0.002 28.1 9.1 84 104-188 9-106 (294)
55 3qze_A DHDPS, dihydrodipicolin 55.6 48 0.0016 29.2 8.5 85 103-188 28-126 (314)
56 2wkj_A N-acetylneuraminate lya 55.2 58 0.002 28.4 9.0 83 104-188 17-114 (303)
57 1f6k_A N-acetylneuraminate lya 54.4 61 0.0021 28.0 8.9 83 104-188 9-107 (293)
58 3na8_A Putative dihydrodipicol 54.2 47 0.0016 29.2 8.2 85 103-188 29-127 (315)
59 2nuw_A 2-keto-3-deoxygluconate 54.0 43 0.0015 28.9 7.9 86 104-193 5-102 (288)
60 3si9_A DHDPS, dihydrodipicolin 53.6 60 0.002 28.6 8.8 85 103-188 27-125 (315)
61 1w3i_A EDA, 2-keto-3-deoxy glu 52.6 50 0.0017 28.6 8.0 86 104-193 5-102 (293)
62 3eb2_A Putative dihydrodipicol 52.1 79 0.0027 27.5 9.3 85 104-189 10-108 (300)
63 1jub_A Dihydroorotate dehydrog 51.9 61 0.0021 27.8 8.5 82 102-187 93-192 (311)
64 2uva_G Fatty acid synthase bet 50.9 29 0.00099 38.6 7.4 103 79-189 558-677 (2060)
65 3dz1_A Dihydrodipicolinate syn 50.8 63 0.0021 28.3 8.5 82 103-187 13-109 (313)
66 2rfg_A Dihydrodipicolinate syn 50.3 48 0.0016 28.8 7.6 83 104-188 7-103 (297)
67 3daq_A DHDPS, dihydrodipicolin 48.9 72 0.0025 27.5 8.5 83 104-188 9-105 (292)
68 2r8w_A AGR_C_1641P; APC7498, d 48.0 73 0.0025 28.2 8.5 84 104-188 40-137 (332)
69 3rjz_A N-type ATP pyrophosphat 48.0 17 0.00059 31.1 4.2 86 99-195 60-154 (237)
70 1icp_A OPR1, 12-oxophytodienoa 47.3 1.5E+02 0.0051 26.6 10.6 21 93-113 19-39 (376)
71 3qfe_A Putative dihydrodipicol 47.0 75 0.0026 27.9 8.4 84 104-188 16-114 (318)
72 2hsa_B 12-oxophytodienoate red 46.9 1.7E+02 0.0057 26.6 11.1 21 93-113 21-41 (402)
73 4fxs_A Inosine-5'-monophosphat 46.6 20 0.00068 33.8 4.8 103 74-189 13-128 (496)
74 4dpp_A DHDPS 2, dihydrodipicol 46.2 1.1E+02 0.0038 27.7 9.5 84 102-187 63-161 (360)
75 1ps9_A 2,4-dienoyl-COA reducta 46.2 1.3E+02 0.0045 28.7 10.6 20 93-112 8-27 (671)
76 2jz7_A Selenium binding protei 46.1 18 0.00061 26.3 3.3 26 167-192 35-61 (81)
77 2ojp_A DHDPS, dihydrodipicolin 44.8 60 0.002 28.0 7.3 84 104-188 7-104 (292)
78 3h5d_A DHDPS, dihydrodipicolin 44.8 1.1E+02 0.0039 26.6 9.2 84 104-188 13-111 (311)
79 3e96_A Dihydrodipicolinate syn 44.3 84 0.0029 27.5 8.2 82 104-187 17-113 (316)
80 3tak_A DHDPS, dihydrodipicolin 44.1 1E+02 0.0035 26.5 8.7 84 104-188 7-104 (291)
81 1o94_A Tmadh, trimethylamine d 43.9 1.2E+02 0.0043 29.3 10.1 20 93-112 12-31 (729)
82 1x60_A Sporulation-specific N- 43.7 63 0.0022 21.9 6.0 33 154-186 8-40 (79)
83 3k30_A Histamine dehydrogenase 43.7 1.8E+02 0.0062 27.8 11.2 20 93-112 17-36 (690)
84 3usb_A Inosine-5'-monophosphat 43.7 47 0.0016 31.3 6.9 107 74-189 37-152 (511)
85 3zen_D Fatty acid synthase; tr 43.4 78 0.0027 36.7 9.5 105 79-191 403-527 (3089)
86 1vr4_A Hypothetical protein AP 43.2 20 0.00068 26.9 3.4 28 166-193 59-87 (103)
87 3qkb_A Uncharacterized protein 42.2 21 0.00072 27.4 3.4 26 166-191 61-87 (111)
88 1zfj_A Inosine monophosphate d 40.4 54 0.0018 30.2 6.6 104 73-187 13-127 (491)
89 1vr6_A Phospho-2-dehydro-3-deo 40.4 55 0.0019 29.6 6.5 34 118-151 156-189 (350)
90 3ks6_A Glycerophosphoryl diest 39.0 49 0.0017 27.7 5.6 72 120-191 118-215 (250)
91 1vs1_A 3-deoxy-7-phosphoheptul 39.0 66 0.0023 28.0 6.6 34 118-151 88-121 (276)
92 3d0c_A Dihydrodipicolinate syn 38.3 1.9E+02 0.0064 25.2 9.5 83 104-188 17-114 (314)
93 2vc6_A MOSA, dihydrodipicolina 38.2 1.6E+02 0.0055 25.2 9.0 84 104-189 7-104 (292)
94 3m5v_A DHDPS, dihydrodipicolin 38.0 1.6E+02 0.0055 25.4 9.0 82 104-188 14-111 (301)
95 3flu_A DHDPS, dihydrodipicolin 37.5 1.5E+02 0.0053 25.5 8.8 84 104-188 13-110 (297)
96 2cu0_A Inosine-5'-monophosphat 37.4 58 0.002 30.2 6.3 39 74-112 17-57 (486)
97 2q5c_A NTRC family transcripti 36.3 1.6E+02 0.0054 23.8 8.2 84 95-185 63-147 (196)
98 1x60_A Sporulation-specific N- 35.4 66 0.0023 21.8 5.0 34 154-187 44-77 (79)
99 1gvf_A Tagatose-bisphosphate a 35.4 41 0.0014 29.6 4.6 68 118-189 28-106 (286)
100 4avf_A Inosine-5'-monophosphat 35.3 48 0.0017 31.0 5.4 39 74-112 12-52 (490)
101 1y2i_A Hypothetical protein S0 35.0 27 0.00091 27.5 3.0 29 166-194 83-112 (133)
102 3lmz_A Putative sugar isomeras 34.4 1.2E+02 0.0042 24.5 7.4 85 99-187 14-109 (257)
103 1nh8_A ATP phosphoribosyltrans 34.0 79 0.0027 28.2 6.3 59 129-187 228-297 (304)
104 2l82_A Designed protein OR32; 32.9 32 0.0011 26.8 3.1 35 163-197 9-43 (162)
105 2pju_A Propionate catabolism o 32.1 1.9E+02 0.0066 24.1 8.2 136 36-185 19-159 (225)
106 2zsk_A PH1733, 226AA long hypo 32.0 26 0.00088 28.9 2.7 39 167-207 60-98 (226)
107 2e6f_A Dihydroorotate dehydrog 31.1 54 0.0018 28.2 4.7 41 147-187 154-195 (314)
108 3sho_A Transcriptional regulat 30.3 1.4E+02 0.0047 23.0 6.7 62 129-190 62-124 (187)
109 1tv5_A Dhodehase, dihydroorota 30.1 36 0.0012 31.8 3.6 32 77-109 68-99 (443)
110 3ojc_A Putative aspartate/glut 30.1 19 0.00066 30.2 1.6 39 167-207 63-101 (231)
111 1zco_A 2-dehydro-3-deoxyphosph 29.7 91 0.0031 26.7 5.9 34 118-151 73-106 (262)
112 3qvl_A Putative hydantoin race 28.9 44 0.0015 28.3 3.6 35 170-207 59-93 (245)
113 2hmc_A AGR_L_411P, dihydrodipi 28.8 2.1E+02 0.007 25.5 8.3 84 104-188 32-126 (344)
114 3viv_A 441AA long hypothetical 28.5 48 0.0016 28.0 3.8 27 167-193 25-51 (230)
115 3nvt_A 3-deoxy-D-arabino-heptu 28.1 74 0.0025 29.1 5.2 48 87-137 124-174 (385)
116 2yxo_A Histidinol phosphatase; 27.9 42 0.0014 27.7 3.3 24 169-192 18-41 (267)
117 1m65_A Hypothetical protein YC 27.6 39 0.0013 27.6 3.0 23 169-191 20-42 (245)
118 3i65_A Dihydroorotate dehydrog 27.6 46 0.0016 30.9 3.8 33 76-109 69-101 (415)
119 1xm3_A Thiazole biosynthesis p 27.4 25 0.00085 30.1 1.8 13 172-184 139-151 (264)
120 1o66_A 3-methyl-2-oxobutanoate 27.3 74 0.0025 27.9 4.9 38 167-207 158-198 (275)
121 3qja_A IGPS, indole-3-glycerol 27.1 83 0.0028 27.1 5.2 75 101-187 112-189 (272)
122 3s81_A Putative aspartate race 26.9 28 0.00096 30.0 2.1 39 167-207 86-124 (268)
123 1f76_A Dihydroorotate dehydrog 26.8 80 0.0028 27.4 5.1 34 155-188 213-246 (336)
124 1aj0_A DHPS, dihydropteroate s 26.8 1.2E+02 0.004 26.4 6.1 26 166-194 162-189 (282)
125 3qvq_A Phosphodiesterase OLEI0 26.6 69 0.0024 26.7 4.5 25 168-192 198-222 (252)
126 3l12_A Putative glycerophospho 26.6 70 0.0024 27.6 4.6 23 169-191 257-279 (313)
127 3h4q_A Putative acetyltransfer 26.6 72 0.0025 23.8 4.3 39 167-205 123-161 (188)
128 2eq5_A 228AA long hypothetical 26.2 69 0.0023 26.0 4.3 34 171-207 66-99 (228)
129 2fiq_A Putative tagatose 6-pho 26.2 2.8E+02 0.0097 25.6 8.9 75 116-190 22-127 (420)
130 1jfl_A Aspartate racemase; alp 26.2 34 0.0012 28.2 2.4 39 167-207 61-99 (228)
131 2h9a_B CO dehydrogenase/acetyl 26.0 1.2E+02 0.004 26.9 6.0 87 101-194 121-214 (310)
132 3t9y_A Acetyltransferase, GNAT 25.9 71 0.0024 22.4 3.9 39 167-205 100-140 (150)
133 3sz8_A 2-dehydro-3-deoxyphosph 25.8 1.2E+02 0.0041 26.7 6.0 34 118-151 77-110 (285)
134 1vrd_A Inosine-5'-monophosphat 25.5 1E+02 0.0036 28.3 5.9 40 73-112 18-59 (494)
135 3jvn_A Acetyltransferase; alph 25.4 63 0.0022 23.3 3.6 39 167-205 108-146 (166)
136 2dqw_A Dihydropteroate synthas 24.9 1.7E+02 0.0059 25.6 6.9 21 167-187 177-197 (294)
137 1tx2_A DHPS, dihydropteroate s 24.9 1.5E+02 0.005 26.1 6.4 22 167-188 182-205 (297)
138 3igs_A N-acetylmannosamine-6-p 24.4 84 0.0029 26.3 4.6 68 115-188 32-109 (232)
139 3ij6_A Uncharacterized metal-d 24.3 2.5E+02 0.0087 23.9 7.9 67 121-188 83-162 (312)
140 3nk6_A 23S rRNA methyltransfer 24.2 2.1E+02 0.0073 24.5 7.3 56 131-188 97-152 (277)
141 3p6l_A Sugar phosphate isomera 23.8 1.1E+02 0.0038 24.8 5.2 25 163-187 87-111 (262)
142 2oog_A Glycerophosphoryl diest 23.4 69 0.0024 27.2 3.9 70 121-190 150-251 (287)
143 1z4e_A Transcriptional regulat 23.1 82 0.0028 22.6 3.8 38 167-204 105-142 (153)
144 3q94_A Fructose-bisphosphate a 23.0 58 0.002 28.7 3.4 66 119-188 32-111 (288)
145 1oy0_A Ketopantoate hydroxymet 23.0 1.1E+02 0.0038 26.8 5.2 37 168-207 177-216 (281)
146 3q58_A N-acetylmannosamine-6-p 22.8 81 0.0028 26.4 4.2 66 115-188 32-109 (229)
147 3mz2_A Glycerophosphoryl diest 22.7 1.9E+02 0.0064 24.9 6.6 30 163-192 211-240 (292)
148 2g0w_A LMO2234 protein; putati 22.7 2E+02 0.0068 23.9 6.7 89 95-186 15-124 (296)
149 2y5s_A DHPS, dihydropteroate s 22.5 2E+02 0.0067 25.2 6.7 22 166-187 170-193 (294)
150 2isw_A Putative fructose-1,6-b 21.9 71 0.0024 28.6 3.8 67 118-188 28-106 (323)
151 2vd3_A ATP phosphoribosyltrans 21.7 1.4E+02 0.0047 26.3 5.6 60 128-187 211-282 (289)
152 1vkc_A Putative acetyl transfe 21.6 1.1E+02 0.0037 22.1 4.3 38 167-205 111-148 (158)
153 2ha8_A TAR (HIV-1) RNA loop bi 21.4 1.5E+02 0.005 23.8 5.3 77 112-189 31-109 (184)
154 3pm6_A Putative fructose-bisph 21.3 83 0.0028 28.0 4.0 67 118-188 37-121 (306)
155 1ur4_A Galactanase; hydrolase, 21.1 1.3E+02 0.0044 27.5 5.5 65 120-185 28-107 (399)
156 3fyn_A Integron gene cassette 21.0 88 0.003 23.0 3.7 40 167-206 120-159 (176)
157 3m0z_A Putative aldolase; MCSG 20.9 65 0.0022 27.9 3.1 23 165-187 197-219 (249)
158 4evy_A Aminoglycoside N(6')-ac 20.5 79 0.0027 23.1 3.3 38 167-204 115-152 (166)
159 1m3u_A 3-methyl-2-oxobutanoate 20.5 3E+02 0.01 23.8 7.4 41 164-207 155-198 (264)
160 1yy3_A S-adenosylmethionine:tR 20.4 98 0.0034 28.1 4.4 110 66-187 141-257 (346)
161 3m6y_A 4-hydroxy-2-oxoglutarat 20.3 75 0.0026 27.9 3.4 24 165-188 220-243 (275)
162 3zwt_A Dihydroorotate dehydrog 20.3 1.4E+02 0.0049 26.8 5.5 33 155-187 222-254 (367)
163 3txv_A Probable tagatose 6-pho 20.1 4.3E+02 0.015 24.7 8.8 77 116-192 29-136 (450)
164 2anu_A Hypothetical protein TM 20.1 73 0.0025 26.5 3.3 20 169-188 37-56 (255)
165 2wje_A CPS4B, tyrosine-protein 20.1 53 0.0018 27.2 2.4 27 165-191 22-48 (247)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=2.4e-57 Score=419.81 Aligned_cols=179 Identities=45% Similarity=0.639 Sum_probs=173.6
Q ss_pred CCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEeccccchh
Q 026410 35 PVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHK 114 (239)
Q Consensus 35 ~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~ 114 (239)
++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+||+++||+|+|||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhcC-CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 026410 115 LANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 115 l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (239)
|+||+||.++||||+++||+|++|+++++|+|||+++.+ ++.|||||+++|++.++++|+|||++||+|||||||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999886 7899999999999999999999999999999999999999
Q ss_pred CCchhHhhcCCCCC---CCCCcc
Q 026410 194 GRREADIKNKMITP---PLKNLE 213 (239)
Q Consensus 194 g~Re~d~r~~f~~p---~~~~~~ 213 (239)
|+||+|+||+|.+| +++++.
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~ 184 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALR 184 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC-
T ss_pred CcchhhhhcCCCCCcccchhhhc
Confidence 99999999999998 556654
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=1.6e-47 Score=358.53 Aligned_cols=181 Identities=43% Similarity=0.719 Sum_probs=172.4
Q ss_pred CCCCCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEecccc
Q 026410 32 AAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTA 111 (239)
Q Consensus 32 ~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g 111 (239)
+..++|++|||+.||++||+.+|+|+.||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||
T Consensus 24 ~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg 103 (392)
T 2nzl_A 24 LPRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATA 103 (392)
T ss_dssp --CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCS
T ss_pred cccCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhc-CCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 026410 112 LHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASC-NAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~-~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
++++.||++|.++|++|+++|++|++|++++.++|+++++. +++.|||||+++|++.+.++++||+++||++|+||+|+
T Consensus 104 ~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~ 183 (392)
T 2nzl_A 104 MQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDT 183 (392)
T ss_dssp CGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSC
T ss_pred ccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 99999999999999999999999999999999999998775 47899999999999999999999999999999999999
Q ss_pred CCCCCchhHhhcCCCCC---CCCCc
Q 026410 191 PRLGRREADIKNKMITP---PLKNL 212 (239)
Q Consensus 191 p~~g~Re~d~r~~f~~p---~~~~~ 212 (239)
|+.|+|++|+|++|.+| +++|+
T Consensus 184 p~~g~R~~d~r~~~~lp~~~~~~n~ 208 (392)
T 2nzl_A 184 PYLGNRLDDVRNRFKLPPQLRMKNF 208 (392)
T ss_dssp SSCCCCHHHHHHTCCCCTTCCCTTC
T ss_pred CCccchhHhHhhccCCccccchhhh
Confidence 99999999999999998 34554
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=1.3e-46 Score=349.52 Aligned_cols=181 Identities=34% Similarity=0.509 Sum_probs=162.7
Q ss_pred CCCCCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEecccc
Q 026410 32 AAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTA 111 (239)
Q Consensus 32 ~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g 111 (239)
+..++|++|||+.||++||+.+|+|+.||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||
T Consensus 10 ~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma 89 (368)
T 2nli_A 10 YIDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIA 89 (368)
T ss_dssp CCCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCS
T ss_pred hccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchh
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhc-CCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 026410 112 LHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASC-NAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~-~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
++++.||+||.+++++|+++|++|++|++++.++|++++.. +++.|||||+++|++.+.++++||+++||++|+||+|+
T Consensus 90 ~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~ 169 (368)
T 2nli_A 90 AHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADS 169 (368)
T ss_dssp CGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBC
T ss_pred hccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 99999999999999999999999999999999999998765 47899999999999999999999999999999999999
Q ss_pred CCCCCchhHhhcCCCCC-CCCCc
Q 026410 191 PRLGRREADIKNKMITP-PLKNL 212 (239)
Q Consensus 191 p~~g~Re~d~r~~f~~p-~~~~~ 212 (239)
|+.|+|++|+|++|.+| ++.|+
T Consensus 170 p~~g~r~~d~~~~~~~p~~~~~~ 192 (368)
T 2nli_A 170 TVSGNRDRDVKNKFVYPFGMPIV 192 (368)
T ss_dssp C---CBC--------CCSCCHHH
T ss_pred CcccchhHHHhhcccCcchhhhh
Confidence 99999999999999888 54444
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=1.3e-45 Score=342.50 Aligned_cols=174 Identities=62% Similarity=0.981 Sum_probs=170.4
Q ss_pred CCCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEeccccch
Q 026410 34 EPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALH 113 (239)
Q Consensus 34 ~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~ 113 (239)
.++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 026410 114 KLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 114 ~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (239)
.+.||+||.+++++|+++|+++++|++++.++||++++.+++.|||||+.+|++.+.+++++++++|+++|+||+|+|+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999999999999
Q ss_pred CCchhHhhcCCCCC
Q 026410 194 GRREADIKNKMITP 207 (239)
Q Consensus 194 g~Re~d~r~~f~~p 207 (239)
|+|++|+|++|.+|
T Consensus 163 g~r~~d~r~~~~~p 176 (370)
T 1gox_A 163 GRREADIKNRFVLP 176 (370)
T ss_dssp CCCHHHHHTTCCCC
T ss_pred cccHHHHHhccCCC
Confidence 99999999999988
No 5
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=9e-46 Score=344.90 Aligned_cols=174 Identities=41% Similarity=0.675 Sum_probs=168.3
Q ss_pred CCCCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEeccccc
Q 026410 33 AEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAL 112 (239)
Q Consensus 33 ~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~ 112 (239)
.+++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||+
T Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~ 82 (380)
T 1p4c_A 3 QNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGL 82 (380)
T ss_dssp -CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred CcCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCccc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 026410 113 HKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 113 ~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
++++||++|.+++|+|+++|+++++|++++.++|++++..+++.|||||+++ ++...++++||+++|+++++||||+|+
T Consensus 83 ~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~ 161 (380)
T 1p4c_A 83 NGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAV 161 (380)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred cccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCcc
Confidence 9999999999999999999999999999999999998765678999999999 999999999999999999999999999
Q ss_pred CCCchhHhhcCCCCC
Q 026410 193 LGRREADIKNKMITP 207 (239)
Q Consensus 193 ~g~Re~d~r~~f~~p 207 (239)
.|+|++|+|++|.+|
T Consensus 162 ~g~r~~d~~~g~~~~ 176 (380)
T 1p4c_A 162 NGYRERDLHNRFKIP 176 (380)
T ss_dssp CCCCHHHHHHTCCCC
T ss_pred ccchhHHHhcCCCCc
Confidence 999999999999877
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=5.6e-45 Score=351.30 Aligned_cols=182 Identities=40% Similarity=0.636 Sum_probs=174.5
Q ss_pred hccccCCcCCCCCCCHHHHHHHHHHhCChhhhhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccC
Q 026410 23 NVHVCRFQMAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKIS 102 (239)
Q Consensus 23 ~~~~~~~~~~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s 102 (239)
.++.|++. .++|++|||+.||++||+.+|+|+.||+++|.|+++|+++|++|+|+||+|+|++++||+|+|||++++
T Consensus 113 ~~~~p~~~---~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~ 189 (511)
T 1kbi_A 113 KSLLPPLD---NIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVD 189 (511)
T ss_dssp HHTCCCGG---GCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEES
T ss_pred cCCCCCcc---ccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCC
Confidence 46777754 688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeccccchhccCc-HHHHHHHHHHhh--cCCceeecCCCCCcHHHHHhhc---CCceeEEEEeecCHHHHHHHHHHH
Q 026410 103 APIIIAPTALHKLANP-EGEVATARAAAS--CNTIMVLSFTSSSSIEEVAASC---NAVRFYQLYVFKKRDIAATLVQRA 176 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp-~gE~alArAA~~--~gi~~~lSs~ss~sleeia~~~---~~~~wfQLy~~~dr~~~~~li~rA 176 (239)
+||+||||+++++.|| ++|.+++|+|++ +|++|++|++++.|+|+|++.. +++.|||||+.+|++.+.++++||
T Consensus 190 ~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~ra 269 (511)
T 1kbi_A 190 VPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNV 269 (511)
T ss_dssp SSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHH
T ss_pred CCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHH
Confidence 9999999999999999 999999999999 9999999999999999998765 368999999999999999999999
Q ss_pred HHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 177 ERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 177 e~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
+++||++|+||||+|+.|+|++++|++|..|
T Consensus 270 e~aG~~al~itvd~p~~g~R~~~~r~g~~~p 300 (511)
T 1kbi_A 270 EKLGVKALFVTVDAPSLGQREKDMKLKFSNT 300 (511)
T ss_dssp HHHTCSCEEEECSCSSCCCCHHHHHHHHTTC
T ss_pred HHcCCCEEEEeCCCCCccccHHHHhccCCCC
Confidence 9999999999999999999999999999888
No 7
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=1.2e-21 Score=182.05 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=114.8
Q ss_pred HHhCChhhhhhhcCCccchhcHHHHHHHhcccccccc-cccCCCCCCcceeecCcccCcceEeccccchhccCcHHHHHH
Q 026410 46 RLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPR-ILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVAT 124 (239)
Q Consensus 46 r~~Lp~~~~~Y~~gGa~de~T~~~N~~af~ri~l~PR-vL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~al 124 (239)
+.+||+..|+|+.+|++++ ++|..+|++|+|+|| ++++++++|++|+|+|++++.||++|||+ ++.|+ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HH
Confidence 3578999999999999999 469999999999998 99999999999999999999999999998 56676 59
Q ss_pred HHHHhhcCCceeecC--------CCCCcHHHHHhhcC-------CceeEEEEeec-CHHHHHHHHHHHHHcCCcEEE
Q 026410 125 ARAAASCNTIMVLSF--------TSSSSIEEVAASCN-------AVRFYQLYVFK-KRDIAATLVQRAERNGFKALV 185 (239)
Q Consensus 125 ArAA~~~gi~~~lSs--------~ss~sleeia~~~~-------~~~wfQLy~~~-dr~~~~~li~rAe~aG~~Alv 185 (239)
|+++.++|.++++|+ .++.++|+|++... ...|||+|+.+ |++...+++++++++|+.+++
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~ 160 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV 160 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE
Confidence 999999999999998 45567888876542 45799999766 999999999999999998876
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.71 E-value=7.5e-19 Score=160.01 Aligned_cols=126 Identities=22% Similarity=0.290 Sum_probs=86.8
Q ss_pred hhhhcCCccchhcHHHHHHHhccccccccccc--CCCCCCcceeecCcccCcceEeccccchhccCcHHH---HHHHHHH
Q 026410 54 YDFYAGGAEDEHTLKENVEAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGE---VATARAA 128 (239)
Q Consensus 54 ~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~--dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE---~alArAA 128 (239)
.+|+..+++++.|+++|+++|++|+|+||+|+ +++++||+|+|||++++.||+||||++. |+.+| .+++++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 48999999999999999999999999999999 8899999999999999999999999753 55554 8999999
Q ss_pred hhcCCceeecCCCCCcHHHHHhhcCCceeEEEEeecCHH----------------H-HHHHHHHHHHcCCcEEEEeecC
Q 026410 129 ASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRD----------------I-AATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 129 ~~~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~~dr~----------------~-~~~li~rAe~aG~~AlvvTVD~ 190 (239)
+++|+++++|++++. +|+. +...|||+ ++++ . .....+.++.+|++++.++++.
T Consensus 85 ~~~G~~~~~~~~~~~-le~~----~~~~~~ql---~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~ 155 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERP----EALRSFRV---RKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNP 155 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCT----TTHHHHCC---TTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCH
T ss_pred HHcCCCEEeCCchhc-ccCC----CccceEEe---eccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccch
Confidence 999999999999875 6642 23457775 2210 0 1333444466789999999874
No 9
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.55 E-value=5.9e-15 Score=136.82 Aligned_cols=114 Identities=13% Similarity=0.090 Sum_probs=99.4
Q ss_pred HHhcccccccccccCCC--CCC--cceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHH
Q 026410 72 EAFHRITFRPRILVDVS--RID--LSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEE 147 (239)
Q Consensus 72 ~af~ri~l~PRvL~dv~--~~D--tst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~slee 147 (239)
.+|++|.|+||++++++ ++| ++|+|+|++++.||++||| |+.+|.++|+|++++|.++++++. .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 36999999999999987 766 5559999999999999997 677899999999999999999964 78999
Q ss_pred HHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCc
Q 026410 148 VAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRLGRR 196 (239)
Q Consensus 148 ia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~g~R 196 (239)
+++......|+|.|..++++...++++++.++|++ +|++|++. |..
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~-G~~ 125 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGAD--FFCVDVAH-AHA 125 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC-CSS
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC-CCc
Confidence 99877666899999999999999999999999999 56777655 444
No 10
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.54 E-value=8.6e-15 Score=135.83 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=80.2
Q ss_pred HHhccccccccccc--CCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHH-
Q 026410 72 EAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV- 148 (239)
Q Consensus 72 ~af~ri~l~PRvL~--dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleei- 148 (239)
.+|++|+|+|+.|+ +++++||+|+|||+++++||+|+||++....+++++.++|++|+++|++|++|+++. .+|+-
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~-~le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYST-ALKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccc-cccCcc
Confidence 68999999999995 788999999999999999999999988888899999999999999999999999875 24432
Q ss_pred ------HhhcC-CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 026410 149 ------AASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 149 ------a~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
.+..| .+.+--|-.... .++..+.++.+|++||.+++|.
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~---~e~~~~~ve~~~adal~ihln~ 178 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKP---YQAGLQAVRDLQPLFLQVHINL 178 (365)
T ss_dssp ------------CCEEEEEETTSC---HHHHHHHHHHHCCSCEEEEECH
T ss_pred ccceEehhhCCCCcEEEEeCCCCC---HHHHHHHHHhcCCCEEEEeccc
Confidence 12223 223323322111 2355666678999999999996
No 11
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.53 E-value=1.3e-14 Score=132.50 Aligned_cols=131 Identities=20% Similarity=0.163 Sum_probs=93.6
Q ss_pred hhhcCCccchhcHHHHHHHhccccccccccc--CCCCCCcceeecCcccCcceEeccc-cchhccCcHHHHHHHHHHhhc
Q 026410 55 DFYAGGAEDEHTLKENVEAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPT-ALHKLANPEGEVATARAAASC 131 (239)
Q Consensus 55 ~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~--dv~~~Dtst~llG~~~s~Pi~iaP~-g~~~l~hp~gE~alArAA~~~ 131 (239)
+++.-+.+... .+.++|++|+|+||+|+ +++++|++|+|||++++.||++||| |+++..++++|.+++++|++.
T Consensus 9 ~h~~~~~~~~~---~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~ 85 (349)
T 1p0k_A 9 QHINHALSIGQ---KRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQA 85 (349)
T ss_dssp ---------------CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCc---cccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHc
Confidence 44544444443 13678999999999999 7799999999999999999999997 666334578899999999999
Q ss_pred CCceeecCCCCCcHHH---------HHhhc-CCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 026410 132 NTIMVLSFTSSSSIEE---------VAASC-NAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 132 gi~~~lSs~ss~slee---------ia~~~-~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
|++|++|++++. +|+ +.+.. ..+.+.|+....+.+. +.+.++.+|+++|.|+++.|.
T Consensus 86 G~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~ 152 (349)
T 1p0k_A 86 GIPLAVGSQMSA-LKDPSERLSYEIVRKENPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQ 152 (349)
T ss_dssp TCCEECCCCTTT-TTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTT
T ss_pred CCcEEeccchhc-ccCcccccceehhhhhCCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchh
Confidence 999999998764 433 23233 3466777764334433 334466789999999999764
No 12
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.30 E-value=3e-12 Score=118.84 Aligned_cols=120 Identities=12% Similarity=0.028 Sum_probs=85.7
Q ss_pred HHHhccccccccccc--CCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCC-----
Q 026410 71 VEAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSS----- 143 (239)
Q Consensus 71 ~~af~ri~l~PRvL~--dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~----- 143 (239)
.+.|++|+|.|+.|+ +++++||+|+|||++++.||+|+||+|......+.+..++++|++.|+++++|+++..
T Consensus 26 ~~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~ 105 (368)
T 3vkj_A 26 STFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAE 105 (368)
T ss_dssp CCSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGG
T ss_pred CCCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHH
Confidence 357999999999999 7899999999999999999999998665433346789999999999999999998421
Q ss_pred ---cHHHHHhhcC-CceeEEEEeecCHH-HHHHHHHH-HHHcCCcEEEEeecC
Q 026410 144 ---SIEEVAASCN-AVRFYQLYVFKKRD-IAATLVQR-AERNGFKALVLTADT 190 (239)
Q Consensus 144 ---sleeia~~~~-~~~wfQLy~~~dr~-~~~~li~r-Ae~aG~~AlvvTVD~ 190 (239)
+.+-+.+..| .+.+-.+....-.+ ...+.+++ ++.+++.|+.|+++.
T Consensus 106 ~~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~ 158 (368)
T 3vkj_A 106 ARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNP 158 (368)
T ss_dssp GSHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCH
T ss_pred HHhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecc
Confidence 2222444455 33343444311111 11233433 455789999999874
No 13
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.14 E-value=6.2e-12 Score=114.75 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=72.3
Q ss_pred hcHHHHHHHhccccccccc--ccCCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHH-HhhcCCceeecCCC
Q 026410 65 HTLKENVEAFHRITFRPRI--LVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARA-AASCNTIMVLSFTS 141 (239)
Q Consensus 65 ~T~~~N~~af~ri~l~PRv--L~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArA-A~~~gi~~~lSs~s 141 (239)
+-.-+|..+|++|+|+||+ +++++++|++|+|+|++++.||++|||++... ..++++ ++..|+.+......
T Consensus 7 ~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s~------~~la~a~~~~gg~g~~~~~~~ 80 (336)
T 1ypf_A 7 HHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTIID------ERIATYLAENNYFYIMHRFQP 80 (336)
T ss_dssp -----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTCC------HHHHHHHHHTTCCCCCCCSSG
T ss_pred cccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCCh------HHHHHHHHhCCCEEEecCCCC
Confidence 3456899999999999999 57999999999999999999999999875431 334444 45556655555433
Q ss_pred CCcHHHHHhhc-CC-ceeEEEEeecCHHHHHHHHHHHHHcC--CcEEEEee
Q 026410 142 SSSIEEVAASC-NA-VRFYQLYVFKKRDIAATLVQRAERNG--FKALVLTA 188 (239)
Q Consensus 142 s~sleeia~~~-~~-~~wfQLy~~~dr~~~~~li~rAe~aG--~~AlvvTV 188 (239)
....+.|.+.. .+ +.-.| +..+.+ ..+.++++.++| ++++.++.
T Consensus 81 ~~~~~~i~~~~~~g~~v~v~--~g~~~~-~~~~a~~~~~~g~~~~~i~i~~ 128 (336)
T 1ypf_A 81 EKRISFIRDMQSRGLIASIS--VGVKED-EYEFVQQLAAEHLTPEYITIDI 128 (336)
T ss_dssp GGHHHHHHHHHHTTCCCEEE--ECCSHH-HHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHHHHhcCCeEEEe--CCCCHH-HHHHHHHHHhcCCCCCEEEEEC
Confidence 32222233222 22 22334 222233 345577778888 77776654
No 14
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.97 E-value=4e-10 Score=104.85 Aligned_cols=73 Identities=21% Similarity=0.265 Sum_probs=59.2
Q ss_pred HHhccccccccccc-CCCCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHH
Q 026410 72 EAFHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (239)
Q Consensus 72 ~af~ri~l~PRvL~-dv~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia 149 (239)
.+|++|+|+||++. +++++|++|+|+ |.+++.||++|||++ +.++|.+.+ +.++|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHH
Confidence 47999999999998 889999999999 999999999999986 456776655 55666666665 467888876
Q ss_pred hhc
Q 026410 150 ASC 152 (239)
Q Consensus 150 ~~~ 152 (239)
+..
T Consensus 82 ~~~ 84 (404)
T 1eep_A 82 KEI 84 (404)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 15
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.91 E-value=1.4e-09 Score=100.03 Aligned_cols=115 Identities=14% Similarity=0.124 Sum_probs=79.9
Q ss_pred cHHHHHHHhccccccccccc-CC-CCCCcceeec-----CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeec
Q 026410 66 TLKENVEAFHRITFRPRILV-DV-SRIDLSTTIL-----DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS 138 (239)
Q Consensus 66 T~~~N~~af~ri~l~PRvL~-dv-~~~Dtst~ll-----G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lS 138 (239)
-+++|..+|++|.|+||.+. ++ +++||+|+|+ |.+++.||++|||++ .+|.++|+|+.++|...+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEc
Confidence 36789999999999999987 68 7999999999 999999999999974 35688999999999888887
Q ss_pred CCCCCcHHHHHhhcC-CceeE-EEEe--ecCHHHHHHHHHHHHHc--CCcEEEEeec
Q 026410 139 FTSSSSIEEVAASCN-AVRFY-QLYV--FKKRDIAATLVQRAERN--GFKALVLTAD 189 (239)
Q Consensus 139 s~ss~sleeia~~~~-~~~wf-QLy~--~~dr~~~~~li~rAe~a--G~~AlvvTVD 189 (239)
. +.++|++.+... .+.++ .+.. ....+. .+.++...+. |++++.+++.
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~g~~~~~-~~~~~~l~~~~~g~~~i~i~~~ 141 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASSGTGSSD-FEQLEQILEAIPQVKYICLDVA 141 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEECSSHHH-HHHHHHHHHHCTTCCEEEEECS
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeecCCChHH-HHHHHHHHhccCCCCEEEEEec
Confidence 5 578888765431 11111 1111 112222 2344444454 8998887764
No 16
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.02 E-value=1.7e-05 Score=81.53 Aligned_cols=108 Identities=20% Similarity=0.199 Sum_probs=80.8
Q ss_pred ccccccCCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceee-cCCCC----------------
Q 026410 80 RPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFTSS---------------- 142 (239)
Q Consensus 80 ~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~l-Ss~ss---------------- 142 (239)
.|..-..+.++|++++++|.+++.||++||+++. .+...++++...|..+++ +|.+.
T Consensus 521 ~p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~ 594 (1025)
T 1gte_A 521 LPLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGT 594 (1025)
T ss_dssp BCCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECC
T ss_pred ccccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEecc
Confidence 3444446688999999999999999999998653 234456667777877776 11110
Q ss_pred ---------------------Cc-------HHHHHhhcC-CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 026410 143 ---------------------SS-------IEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 143 ---------------------~s-------leeia~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (239)
.+ ++++++..+ .+.|+|++...+.+...+.+++++++|+++|.|++..|..
T Consensus 595 ~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~ 674 (1025)
T 1gte_A 595 TSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG 674 (1025)
T ss_dssp TTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred ccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 11 244455454 6789999888889999999999999999999999999876
No 17
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.40 E-value=0.00053 Score=63.12 Aligned_cols=100 Identities=16% Similarity=0.154 Sum_probs=65.8
Q ss_pred HhcccccccccccCC--CCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHH-HhhcCCceeecCCCCCcHHHH
Q 026410 73 AFHRITFRPRILVDV--SRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARA-AASCNTIMVLSFTSSSSIEEV 148 (239)
Q Consensus 73 af~ri~l~PRvL~dv--~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArA-A~~~gi~~~lSs~ss~sleei 148 (239)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.+||.+.. +..+|.+ |.+-|+.++-. ..+++++
T Consensus 14 ~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~---~~s~e~~ 83 (361)
T 3khj_A 14 TFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK---NMDMESQ 83 (361)
T ss_dssp CGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS---SSCHHHH
T ss_pred CcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec---CCCHHHH
Confidence 5999999998 6765 5689999998 79999999999987432 3356664 44556655544 3445543
Q ss_pred H----hhc--C-CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 149 A----ASC--N-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 149 a----~~~--~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
. +.. + -+....+.... .+.++.+.++|++.|+|+
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~ld 124 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIVLD 124 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEEEe
Confidence 3 221 2 22233443322 677888889999966543
No 18
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.27 E-value=0.00015 Score=65.20 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=33.7
Q ss_pred CCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceee
Q 026410 89 RIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL 137 (239)
Q Consensus 89 ~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~l 137 (239)
.+|++++++|.+++.||++|+ |. +.++| ..+++++.|+.+++
T Consensus 42 ~~~l~~~i~g~~l~npi~~aa-g~----~~~~~--~~~~~a~~G~g~i~ 83 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAA-GL----DKDGE--CIDALGAMGFGSIE 83 (336)
T ss_dssp CCCCCEEETTEEESSSEEECT-TS----STTCC--CHHHHHHTTCSEEE
T ss_pred CCCCCeEECCEEcCCCcEeCc-cc----CCcHH--HHHHHHHcCccEEE
Confidence 489999999999999999994 32 44455 77778889998754
No 19
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.74 E-value=0.0042 Score=57.33 Aligned_cols=106 Identities=21% Similarity=0.162 Sum_probs=65.6
Q ss_pred HhcccccccccccCC--CCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHH
Q 026410 73 AFHRITFRPRILVDV--SRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (239)
Q Consensus 73 af~ri~l~PRvL~dv--~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia 149 (239)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.|||.... +..+|.+...+|-.-++.. +.+.|+..
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 5899999997 5544 4789999997 68899999999987432 3466655555544444432 34566543
Q ss_pred hhc----C-CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q 026410 150 ASC----N-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 150 ~~~----~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (239)
+.. . +..-..+-.... ....+.++.+.++|++.|+|+.
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~-~~~~~~~~~lieaGvd~I~idt 128 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAA-PGNEERVKALVEAGVDVLLIDS 128 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSC-TTCHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhcCceeEEEEeccC-hhHHHHHHHHHhCCCCEEEEeC
Confidence 221 1 111122222111 1245678888999999877653
No 20
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.72 E-value=0.0065 Score=53.80 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=66.5
Q ss_pred CCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeec-CCC--------------------------C
Q 026410 90 IDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS-FTS--------------------------S 142 (239)
Q Consensus 90 ~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lS-s~s--------------------------s 142 (239)
+|++++++|.+++.||++|+.. .+.++|. .+.+.+.|+.+++. +.+ +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~----~~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGV----LCSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTS----SCSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCC----CCCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 5899999999999999999732 1223443 46678888887543 222 1
Q ss_pred CcHH----HHHhh-c--CCceeEEEEeecCHHHHHHHHHHHHHcCCc---EEEEeecCCCC
Q 026410 143 SSIE----EVAAS-C--NAVRFYQLYVFKKRDIAATLVQRAERNGFK---ALVLTADTPRL 193 (239)
Q Consensus 143 ~sle----eia~~-~--~~~~wfQLy~~~dr~~~~~li~rAe~aG~~---AlvvTVD~p~~ 193 (239)
..++ ++... . +.+...||. -.+.+...+.+++++++|++ +|-|++-+|..
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~ 135 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV 135 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC
Confidence 2233 34332 1 245566764 34667778889999999999 89999988876
No 21
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.53 E-value=0.0032 Score=55.32 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=62.5
Q ss_pred CCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHH--hhcCCcee-----------------------ecCC-
Q 026410 87 VSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAA--ASCNTIMV-----------------------LSFT- 140 (239)
Q Consensus 87 v~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA--~~~gi~~~-----------------------lSs~- 140 (239)
++++|++++++|.+++.||++|| |+.+... +. .+.+ ...|...+ +++.
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~~--~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g 75 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---EY--AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIG 75 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECT-TSSTTST---TG--GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCC
T ss_pred CCCCccceEECCEECCCCcEECC-CCCCCCH---HH--HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccC
Confidence 36789999999999999999999 2222211 11 2333 33443221 1222
Q ss_pred -CCCcHHHH--------Hhhc-CCceeEEEEeecCHHHHHHHHHHHHH-cCCcEEEEeecCCCC
Q 026410 141 -SSSSIEEV--------AASC-NAVRFYQLYVFKKRDIAATLVQRAER-NGFKALVLTADTPRL 193 (239)
Q Consensus 141 -ss~sleei--------a~~~-~~~~wfQLy~~~dr~~~~~li~rAe~-aG~~AlvvTVD~p~~ 193 (239)
...+.+++ .+.. +.+.+.||.-. +.+...+.++++++ +|+++|-|++.+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d~iei~~~~p~~ 138 (311)
T 1ep3_A 76 LQNPGLEVIMTEKLPWLNENFPELPIIANVAGS-EEADYVAVCAKIGDAANVKAIELNISCPNV 138 (311)
T ss_dssp CCBCCHHHHHHTHHHHHHHHCTTSCEEEEECCS-SHHHHHHHHHHHTTSTTEEEEEEECCSEEG
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcCC-CHHHHHHHHHHHhccCCCCEEEEeCCCCCC
Confidence 22333332 2213 35677888643 45667788888888 999999999987763
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=96.03 E-value=0.0059 Score=54.58 Aligned_cols=89 Identities=15% Similarity=0.062 Sum_probs=61.7
Q ss_pred ccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCC---------cHHHHHhhcCCceeEEEEeecCHHHHH
Q 026410 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSS---------SIEEVAASCNAVRFYQLYVFKKRDIAA 170 (239)
Q Consensus 100 ~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~---------sleeia~~~~~~~wfQLy~~~dr~~~~ 170 (239)
+++.||++|||++. . +....+.+++.|..++++.+.+. .++.+....+.+.|+||+ -.+++...
T Consensus 2 ~l~nri~~APM~~~--t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGY--T----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTT--C----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCC--C----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 46789999998743 2 24677777777877777654321 122330112468899999 66788888
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCc
Q 026410 171 TLVQRAERNGFKALVLTADTPRLGRR 196 (239)
Q Consensus 171 ~li~rAe~aG~~AlvvTVD~p~~g~R 196 (239)
+..++|+++ |++|-|++.+|....|
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r 99 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVV 99 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcC
Confidence 999999999 9999999999986443
No 23
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.66 E-value=0.079 Score=46.66 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=63.7
Q ss_pred cceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecC-CCCCc--------------------------
Q 026410 92 LSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSF-TSSSS-------------------------- 144 (239)
Q Consensus 92 tst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs-~ss~s-------------------------- 144 (239)
++++++|.+++.||++||.. .+.++| ..+.+.+.|..+++.. .+..+
T Consensus 2 l~~~i~g~~l~npv~~Aag~----~~~~~~--~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGV----HCMTIE--DLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTS----SCSSHH--HHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCC----CCCCHH--HHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 67899999999999999721 123343 4466778887776632 21111
Q ss_pred H----HHHHhh---c--CCceeEEEEeecCHHHHHHHHHHHHHcCCc-EEEEeecCCCC
Q 026410 145 I----EEVAAS---C--NAVRFYQLYVFKKRDIAATLVQRAERNGFK-ALVLTADTPRL 193 (239)
Q Consensus 145 l----eeia~~---~--~~~~wfQLy~~~dr~~~~~li~rAe~aG~~-AlvvTVD~p~~ 193 (239)
+ +++... . +.+...|+. -.+.+...+.+++++++|++ +|.|++-+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~ 133 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV 133 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC
Confidence 2 233221 2 234566764 34667778889999999999 99999988876
No 24
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.75 E-value=0.068 Score=47.87 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=55.7
Q ss_pred eeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEEeecCH
Q 026410 94 TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFKKR 166 (239)
Q Consensus 94 t~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleei-------a~~~~~~~wfQLy~~~dr 166 (239)
+++|| +..||+.+||++ +.. ..++.++.++|..-++... ..+.+++ .+..+.+...|++... .
T Consensus 6 ~~~l~--~~~Pii~apM~g--~s~----~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-~ 75 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMAW--VAD----GDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLS-P 75 (332)
T ss_dssp HHHHT--CSSSEEECCCTT--TCC----HHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTS-T
T ss_pred hHHhC--CCCCEEeCCCCC--CCc----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCC-C
Confidence 34676 788999999984 333 3466777777764444332 1233332 2222345677887632 2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p 191 (239)
+ ..+.++++.++|+++|.++.+.|
T Consensus 76 ~-~~~~~~~a~~~g~d~V~~~~g~p 99 (332)
T 2z6i_A 76 F-VEDIVDLVIEEGVKVVTTGAGNP 99 (332)
T ss_dssp T-HHHHHHHHHHTTCSEEEECSSCG
T ss_pred C-HHHHHHHHHHCCCCEEEECCCCh
Confidence 2 45778999999999999998765
No 25
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.56 E-value=0.17 Score=45.08 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=57.5
Q ss_pred eeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEEeec--
Q 026410 94 TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFK-- 164 (239)
Q Consensus 94 t~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleei-------a~~~~~~~wfQLy~~~-- 164 (239)
+++|| +..||+.+||++ +. +..++.++.++|..-++...+..+.+++ ++..+.+.-.+++...
T Consensus 9 ~~~l~--~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQW--VG----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCC--CC----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 45675 578999999964 33 3457888888886555544332234443 2223334556787751
Q ss_pred -CHHHHHHHHHHHHHcCCcEEEEeecCC
Q 026410 165 -KRDIAATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 165 -dr~~~~~li~rAe~aG~~AlvvTVD~p 191 (239)
+++ ..+.++.+.++|++.|.++.+.|
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p 107 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP 107 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc
Confidence 122 45778899999999999998765
No 26
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=94.26 E-value=0.058 Score=48.77 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCcee
Q 026410 87 VSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMV 136 (239)
Q Consensus 87 v~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~ 136 (239)
-.++|++|++||.+|+-||++|+ +.+..++|. .++..+.|..++
T Consensus 32 ~~~~~L~v~~~Gl~f~NPvglAa----G~~~~~~e~--~~~l~~~G~G~v 75 (354)
T 3tjx_A 32 RGSMSLQVNLLNNTFANPFMNAA----GVMCTTTEE--LVAMTESASGSL 75 (354)
T ss_dssp -CCCCCCEEETTEEESSSEEECT----TSSCSSHHH--HHHHHHSSCSCE
T ss_pred CCCCceeEEECCEEcCCCcEEcc----CCCCCCHHH--HHHHHHcCCCEE
Confidence 35789999999999999999985 223445554 444444554443
No 27
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=92.99 E-value=0.033 Score=49.33 Aligned_cols=56 Identities=21% Similarity=0.351 Sum_probs=47.3
Q ss_pred cCCceeEEEEee-------cCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 152 CNAVRFYQLYVF-------KKRDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 152 ~~~~~wfQLy~~-------~dr~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
..+..|++|++- .|...+.+..++.++.|++.+.+++|.|..++|..+....+.+|
T Consensus 100 ~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmP 162 (265)
T 1wv2_A 100 LDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMP 162 (265)
T ss_dssp TTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEe
Confidence 345679999998 67777777777777889999999999999999999998877666
No 28
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=92.11 E-value=0.37 Score=43.60 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=55.2
Q ss_pred cCcceEeccccchhccCcHHHHHHHHHHhhcCC-ceeecCCCCC-cH-----HHHHhhc--CCceeEEEEeecCHHHHHH
Q 026410 101 ISAPIIIAPTALHKLANPEGEVATARAAASCNT-IMVLSFTSSS-SI-----EEVAASC--NAVRFYQLYVFKKRDIAAT 171 (239)
Q Consensus 101 ~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi-~~~lSs~ss~-sl-----eeia~~~--~~~~wfQLy~~~dr~~~~~ 171 (239)
+..||++|||++ .. +......+++.|- .++++-+.+. .+ +++.+.. +.+.+.||+ -.+.+...+
T Consensus 2 l~nriv~APM~g--~t----d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVD--RT----DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTT--TS----SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCC--CC----HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 567999999975 22 2233334444442 3444333211 11 2343322 367899998 456777888
Q ss_pred HHHHHHHcCCcEEEEeecCCCC
Q 026410 172 LVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 172 li~rAe~aG~~AlvvTVD~p~~ 193 (239)
..++++++||++|-|++.+|..
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSE 96 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSH
T ss_pred HHHHHHHcCCCEEEECCcCCCC
Confidence 8999999999999999988874
No 29
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=90.73 E-value=1.3 Score=39.89 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=53.4
Q ss_pred CcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEEeecCH--------
Q 026410 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFKKR-------- 166 (239)
Q Consensus 102 s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleei-------a~~~~~~~wfQLy~~~dr-------- 166 (239)
..||+.|||++ ++. ...++.++.++|-.-+++.. ..+.+++ .+..+.+.-.+++.....
T Consensus 10 ~~Pii~apMag-gvs----~~~la~av~~aGglG~i~~~-~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~ 83 (369)
T 3bw2_A 10 PLPIVQAPMAG-GVS----VPQLAAAVCEAGGLGFLAAG-YKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVE 83 (369)
T ss_dssp SSSEEECCCTT-TTS----CHHHHHHHHHTTSBEEEECT-TSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHH
T ss_pred cCCEEeCCCCC-CCC----cHHHHHHHHHCCCEEEcCCC-CCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHH
Confidence 88999999975 222 35677788888866666542 2344443 222334444566554331
Q ss_pred -------------------------HHHHHHHHHHHHcCCcEEEEeecCC
Q 026410 167 -------------------------DIAATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 167 -------------------------~~~~~li~rAe~aG~~AlvvTVD~p 191 (239)
+...+.++.+.++|++.+.++...|
T Consensus 84 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~ 133 (369)
T 3bw2_A 84 VYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP 133 (369)
T ss_dssp HHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC
T ss_pred HHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC
Confidence 1135678888899999999998776
No 30
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=90.50 E-value=0.16 Score=54.28 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=47.5
Q ss_pred HhcccccccccccC--CCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCC
Q 026410 73 AFHRITFRPRILVD--VSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTS 141 (239)
Q Consensus 73 af~ri~l~PRvL~d--v~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~s 141 (239)
.|+.+.+.+..+.. ++++|+++ ++..||+++||++..+ .++...++|+||.++|+.+.++...
T Consensus 824 ~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg 888 (1479)
T 1ea0_A 824 QLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG 888 (1479)
T ss_dssp SGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC
T ss_pred chhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc
Confidence 35555555555543 34566655 6799999999986555 5789999999999999999998754
No 31
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.72 E-value=0.49 Score=43.98 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=50.6
Q ss_pred Hhccccccccccc-CCCCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHh
Q 026410 73 AFHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (239)
Q Consensus 73 af~ri~l~PRvL~-dv~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~ 150 (239)
.|+++.|+|..-. .-+++|++|.|- ...+..||+-|||++. . +..+|.|..++|-.-+++. ..++|++++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~V--s----~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTV--T----EHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTT--C----SSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCc--C----cHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 4899999997433 235789999886 4678999999999743 2 3467777777887777874 456766543
No 32
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=88.22 E-value=2.3 Score=37.85 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=51.0
Q ss_pred ccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHH-------hhcCCceeEEEEeecCHHHHHHH
Q 026410 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA-------ASCNAVRFYQLYVFKKRDIAATL 172 (239)
Q Consensus 100 ~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia-------~~~~~~~wfQLy~~~dr~~~~~l 172 (239)
.+..||+.+||++ +.+ ..++.++.++|..-+++.. ..+.+++. +....+.-.++... +.. ..+.
T Consensus 24 ~~~~Pii~apM~g--vs~----~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAW--AGT----PTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADDL 94 (326)
T ss_dssp TCSSSEEECCCTT--TSC----HHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHHH
T ss_pred CCCCCEEECCCCC--CCC----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHHH
Confidence 4578999999985 333 3577787787765555432 22444432 11223334455442 222 3677
Q ss_pred HHHHHHcCCcEEEEeecCC
Q 026410 173 VQRAERNGFKALVLTADTP 191 (239)
Q Consensus 173 i~rAe~aG~~AlvvTVD~p 191 (239)
++.+.++|++.|.++.+.|
T Consensus 95 ~~~~~~~g~d~V~l~~g~p 113 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTCSEEEEESSCC
T ss_pred HHHHHHCCCCEEEECCCCc
Confidence 8888899999999988765
No 33
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=87.38 E-value=1.8 Score=39.46 Aligned_cols=107 Identities=10% Similarity=0.076 Sum_probs=62.8
Q ss_pred ccccccCCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceee-cCC------------------
Q 026410 80 RPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFT------------------ 140 (239)
Q Consensus 80 ~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~l-Ss~------------------ 140 (239)
.|+--..++++|++|+++|.++.-||++|. +....++ ...++....|..+++ .|.
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAA----G~~~~~~--e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAA----GVMCTTT--EELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECT----TSSCSSH--HHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEecc----CCCCCCH--HHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 344445678899999999999999999986 2211222 334555555554432 221
Q ss_pred --------CCCcHHHH----Hhhc---CCceeEEEEeecCHHHHHHHHHHHH---HcCCcEEEEeecCCCC
Q 026410 141 --------SSSSIEEV----AASC---NAVRFYQLYVFKKRDIAATLVQRAE---RNGFKALVLTADTPRL 193 (239)
Q Consensus 141 --------ss~sleei----a~~~---~~~~wfQLy~~~dr~~~~~li~rAe---~aG~~AlvvTVD~p~~ 193 (239)
.+..++.+ .+.. +.+...||. -.+.+...+.+++++ ++|+++|-|.+-+|..
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~ 168 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV 168 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC
Confidence 12345543 3221 235677874 346666777788887 6799999999987764
No 34
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=83.94 E-value=0.63 Score=50.00 Aligned_cols=63 Identities=10% Similarity=-0.052 Sum_probs=45.0
Q ss_pred hcccccccccccC--CCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCC
Q 026410 74 FHRITFRPRILVD--VSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSS 142 (239)
Q Consensus 74 f~ri~l~PRvL~d--v~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss 142 (239)
|+.+.+.+..+.. ++++|+.+ .+..||+++||++..+ .++...++|+||.++|+.+.++....
T Consensus 842 ~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~ 906 (1520)
T 1ofd_A 842 LRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE 906 (1520)
T ss_dssp GGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC
T ss_pred hhhhccccCCCCCCCchhhcccc-----cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC
Confidence 4444444434432 24455544 6799999999986554 46789999999999999999987643
No 35
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=83.91 E-value=8.1 Score=34.91 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=62.4
Q ss_pred CCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeec-CC--------------------------CC
Q 026410 90 IDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS-FT--------------------------SS 142 (239)
Q Consensus 90 ~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lS-s~--------------------------ss 142 (239)
+|++++++|.++.-||++|. +..-. .....+.+...|..+++. |. .+
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAa----G~~~~--~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n 109 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAA----GVYCM--TREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPN 109 (345)
T ss_dssp CCCCEEETTEEESCSEEECT----TSSCS--SHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCB
T ss_pred CCcCeEECCEECCCCCEEcC----CCCCC--CHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCC
Confidence 68999999999999999984 22111 223445555666555433 21 11
Q ss_pred CcHH----HHHhh----cCCceeEEEEeecCHHHHHHHHHHHHHcCCc-EEEEeecCCCC
Q 026410 143 SSIE----EVAAS----CNAVRFYQLYVFKKRDIAATLVQRAERNGFK-ALVLTADTPRL 193 (239)
Q Consensus 143 ~sle----eia~~----~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~-AlvvTVD~p~~ 193 (239)
..+| ++.+. .+.+...||. -.+.+...+.+++++++|+. +|-|.+-+|..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~ 168 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV 168 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc
Confidence 2333 34331 1346678885 34667777888899889988 99999987754
No 36
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=76.17 E-value=14 Score=32.81 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=17.7
Q ss_pred ceeecCcccCcceEeccccchh
Q 026410 93 STTILDYKISAPIIIAPTALHK 114 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~~~ 114 (239)
..+|-|.+++-+|++|||+...
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~ 29 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYS 29 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCC
T ss_pred CeeECCEEEcCccEECCcCCCc
Confidence 3577788999999999987543
No 37
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=73.06 E-value=26 Score=31.49 Aligned_cols=46 Identities=9% Similarity=0.088 Sum_probs=29.6
Q ss_pred eeecCcccCcceEeccccchhccCcH---HHHHHHHHHhhcCCceeecC
Q 026410 94 TTILDYKISAPIIIAPTALHKLANPE---GEVATARAAASCNTIMVLSF 139 (239)
Q Consensus 94 t~llG~~~s~Pi~iaP~g~~~l~hp~---gE~alArAA~~~gi~~~lSs 139 (239)
.+|=+.+++-.|++|||+...-..++ .+..+..-++.+|..++++-
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite 57 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISE 57 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEE
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEc
Confidence 56777888999999999765310233 25555555666666666543
No 38
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=71.61 E-value=16 Score=32.97 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=28.8
Q ss_pred eeecCcccCcceEeccccchhccCcHH---HHHHHHHHhhcCCceeec
Q 026410 94 TTILDYKISAPIIIAPTALHKLANPEG---EVATARAAASCNTIMVLS 138 (239)
Q Consensus 94 t~llG~~~s~Pi~iaP~g~~~l~hp~g---E~alArAA~~~gi~~~lS 138 (239)
.+|=|.+++-.|+.|||+...-..++| +..+..-++.++..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiit 56 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVS 56 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEE
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 567788899999999987653211333 555555555556656554
No 39
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=63.25 E-value=30 Score=29.86 Aligned_cols=82 Identities=20% Similarity=0.125 Sum_probs=51.2
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecCC---CCCcHHHHH-------hhcCCceeEEEEeecCHHHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEVA-------ASCNAVRFYQLYVFKKRDIAAT 171 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs~---ss~sleeia-------~~~~~~~wfQLy~~~dr~~~~~ 171 (239)
|.++.|+- .+-.+.++-..+++-..+.|+-- +.||. .+.|.||-. +...+ -+.++- ..+-..+.+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHH
Confidence 55667776 65556667677777777777743 34542 345665532 22334 222221 235566788
Q ss_pred HHHHHHHcCCcEEEEee
Q 026410 172 LVQRAERNGFKALVLTA 188 (239)
Q Consensus 172 li~rAe~aG~~AlvvTV 188 (239)
+.+.|+++|++++++..
T Consensus 82 la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 82 LAKYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 99999999999999883
No 40
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=62.59 E-value=37 Score=29.42 Aligned_cols=82 Identities=13% Similarity=0.058 Sum_probs=51.3
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCCceeEEEEe---ecCHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNAVRFYQLYV---FKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~~~wfQLy~---~~dr~~ 168 (239)
|.++.|+. .+-.+.++-..+++-..+.|+-- +.|| ..+.|.||-. +...+. ..++. ..+-..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr--vpviaGvg~~~t~~ 83 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGR--IKVIAGTGGNATHE 83 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTS--SEEEEECCCSCHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC--CcEEEecCCCCHHH
Confidence 55667776 66556677778888777777743 4454 2345565522 222321 13333 225566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 84 ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78889999999999998884
No 41
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=61.77 E-value=44 Score=30.21 Aligned_cols=44 Identities=14% Similarity=0.323 Sum_probs=27.4
Q ss_pred ceeecCcccCcceEeccccchhccCcH---HHHHHHHHHhhcCCceeec
Q 026410 93 STTILDYKISAPIIIAPTALHKLANPE---GEVATARAAASCNTIMVLS 138 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~~~l~hp~---gE~alArAA~~~gi~~~lS 138 (239)
..+|=+.+++-.|++|||+... + ++ .+..+..-++.+|..++++
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~-a-~~g~pt~~~~~~y~~rA~~GLiit 60 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSR-T-PDSVPGRLQQIYYGQRASAGLIIS 60 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCC-C-TTSCCCHHHHHHHHHTTTSSCEEE
T ss_pred CeeECCEEecCCeEECCCcCCc-C-CCCCCCHHHHHHHHHHhcCCEEEE
Confidence 3667788899999999987643 1 22 2444545455555555544
No 42
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=60.78 E-value=43 Score=29.27 Aligned_cols=84 Identities=10% Similarity=0.060 Sum_probs=52.2
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCCceeEEEEe---ecCHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNAVRFYQLYV---FKKRD 167 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~~~wfQLy~---~~dr~ 167 (239)
.|.++.|+.-.+-.+.++-..+++-..+.|+- ++.||. .+.|.||-. +...+. ..++. ..+-.
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~gr--vpviaGvg~~~t~ 97 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDR--ARVIAGAGTYDTA 97 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTT--SEEEEECCCSCHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCC--CeEEEeCCCCCHH
Confidence 35566777544445666667777777777874 444443 334666522 222321 13333 23567
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 026410 168 IAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTV 188 (239)
.+.++.+.|+++|++++++..
T Consensus 98 ~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 98 HSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECC
Confidence 778999999999999999974
No 43
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=60.38 E-value=48 Score=29.19 Aligned_cols=62 Identities=15% Similarity=0.216 Sum_probs=44.0
Q ss_pred HHHHHHhhcCCceeecCCCCCcHHHHHhhcCCceeEEEEee----cCHHHHHHHHHHHHHcCCcEEEEee
Q 026410 123 ATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVF----KKRDIAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 123 alArAA~~~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~----~dr~~~~~li~rAe~aG~~AlvvTV 188 (239)
..++.|.++|.-++--+++..+++++.+..+-+ +... .+.+...+.++.|.++|+.++++.-
T Consensus 193 ~aariA~elGAD~VKt~~t~e~~~~vv~~~~vP----Vv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGR 258 (295)
T 3glc_A 193 LATRIAAEMGAQIIKTYYVEKGFERIVAGCPVP----IVIAGGKKLPEREALEMCWQAIDQGASGVDMGR 258 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSC----EEEECCSCCCHHHHHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCc----EEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHH
Confidence 478889899988776666556788888765422 2222 2556667889999999999988753
No 44
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=60.34 E-value=6.5 Score=35.81 Aligned_cols=44 Identities=23% Similarity=0.153 Sum_probs=28.4
Q ss_pred hhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEecc
Q 026410 64 EHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (239)
Q Consensus 64 e~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP 109 (239)
|.+++--..+++. .+.|+. +..+.++++++++|.+++-||++|.
T Consensus 24 e~ah~~~~~~l~~-~~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa 67 (367)
T 3zwt_A 24 ESAHRLAVRFTSL-GLLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA 67 (367)
T ss_dssp HHHHHHHHHHHHT-TCC----CCCCCGGGCEEETTEEESSSEEECT
T ss_pred HHHHHHHHHHHHh-cccccc-ccCCCCCCcEEECCEEcCCCCEeCC
Confidence 4444444444443 244542 3356788999999999999999984
No 45
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=60.29 E-value=12 Score=36.27 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=47.8
Q ss_pred Hhccccccccccc-CCCCCCcceee-cCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHh
Q 026410 73 AFHRITFRPRILV-DVSRIDLSTTI-LDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (239)
Q Consensus 73 af~ri~l~PRvL~-dv~~~Dtst~l-lG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~ 150 (239)
.|+.+.|+|..-. .-+++|++|.| =+.++..||+-|||-- . -|..+|-+-++.|=.-++- -+.|+|+-++
T Consensus 61 TfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDT--V----Te~~MAIamAr~GGiGvIH--~n~sie~Qa~ 132 (556)
T 4af0_A 61 TYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDT--V----TEDRMAIALALHGGLGIIH--HNCSAEEQAA 132 (556)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTT--T----CSHHHHHHHHHTTCEEEEC--CSSCHHHHHH
T ss_pred ChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccc--c----cCHHHHHHHHHCCCeEEEc--CCCCHHHHHH
Confidence 5899999997532 12478999888 4788999999999732 1 2455666666665555552 3456776443
Q ss_pred hcC-----CceeE--EEEeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 026410 151 SCN-----AVRFY--QLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 151 ~~~-----~~~wf--QLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
... ...|. .+.+..| ..+.+.++.-++-|+.++.|+-|.
T Consensus 133 ~V~~VKr~e~g~i~dPvtl~P~-~Tv~da~~l~~~~~isgvpVvd~g 178 (556)
T 4af0_A 133 MVRRVKKYENGFITDPLCLGPD-ATVGDVLEIKAKFGFCGVPITETG 178 (556)
T ss_dssp HHHHHHHCCC-------------------------------------
T ss_pred HHHHHHhcccCccCCCeEcCCC-CCHHHHHHHHHHhCCCcccccccc
Confidence 320 11121 1222222 223455555566777777777653
No 46
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=60.28 E-value=38 Score=29.30 Aligned_cols=82 Identities=21% Similarity=0.129 Sum_probs=50.8
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCCceeEEEEe---ecCHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNAVRFYQLYV---FKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~~~wfQLy~---~~dr~~ 168 (239)
|.++.|+- .+-.+.++-..+++---+.|+-- +.|| ..+.|.||-. ++..+. ..++. ..+-..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr--~pviaGvg~~~t~~ 83 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGR--VQVIAGAGSNCTEE 83 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTS--SEEEEECCCSSHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC--CcEEEeCCCCCHHH
Confidence 45566776 65556677677777777777743 4454 2345555522 222321 13333 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 84 ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999998883
No 47
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=59.61 E-value=47 Score=29.10 Aligned_cols=88 Identities=10% Similarity=0.024 Sum_probs=52.6
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHH-------HhhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleei-------a~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+.-.+-.+.++-..+++--.+.|+- +++|| ..+.|.||- .+...+ +-+.++- ..+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 35566777544445666667777777777763 34444 234456552 222222 2222221 235667
Q ss_pred HHHHHHHHHHcCCcEEEEeecCCCC
Q 026410 169 AATLVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p~~ 193 (239)
+.++.+.|+++|++++++.. |..
T Consensus 92 ai~la~~A~~~Gadavlv~~--Pyy 114 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMP--PYH 114 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECC--SCB
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCC
Confidence 78999999999999999874 554
No 48
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=59.61 E-value=60 Score=28.29 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=50.3
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHH-------HhhcCCceeEEEEe---ecCHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEV-------AASCNAVRFYQLYV---FKKRD 167 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleei-------a~~~~~~~wfQLy~---~~dr~ 167 (239)
.|.++.|+--.+-.+.++-..+++-..+.|+-- +.|| ..+.|.||- .+...+. ..++. ..+-.
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gr--vpviaGvg~~st~ 98 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDR--AKLIAGVGTNNTR 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTT--SEEEEECCCSCHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC--CcEEecCCCCCHH
Confidence 355566764344445666667777777777643 4454 334566552 2222321 13333 23556
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 026410 168 IAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTV 188 (239)
.+.++.+.|+++|++++++..
T Consensus 99 ~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 99 TSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECC
Confidence 678899999999999998884
No 49
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=59.13 E-value=44 Score=28.90 Aligned_cols=83 Identities=13% Similarity=0.037 Sum_probs=52.3
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+--.+ .+.++-..+++-..+.|+-- ++|| ..+.|.||-. +...+ +-+.++- ..+-..+
T Consensus 8 ~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~a 85 (291)
T 3a5f_A 8 VAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAAS 85 (291)
T ss_dssp EECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 55667775556 67777778888777777743 3444 3345665532 22232 2222221 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999999984
No 50
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=58.97 E-value=36 Score=29.80 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=51.7
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+. .+-.+.++-..+++-..+.|+-- +.|| ..+.|.||-. +...+ +-+..+- ..+-..
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 355667776 66556677677777777777743 4454 3345665522 22222 2222221 225566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 96 ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999999884
No 51
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=57.86 E-value=55 Score=28.57 Aligned_cols=83 Identities=8% Similarity=-0.003 Sum_probs=50.1
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHHH-------hhcCCceeEEEEe---ecCHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEVA-------ASCNAVRFYQLYV---FKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleeia-------~~~~~~~wfQLy~---~~dr~~ 168 (239)
|-++.|+.-.+-.+.++-..+++--.+.|+- ++.|| ..+.|.||-. +..++. ..++. ..+-..
T Consensus 20 ~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr--~pviaGvg~~~t~~ 97 (307)
T 3s5o_A 20 PPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKN--RLLLAGSGCESTQA 97 (307)
T ss_dssp CBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTT--SEEEEECCCSSHHH
T ss_pred EeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCC--CcEEEecCCCCHHH
Confidence 5556676444444566667777777788874 33444 2345565522 222221 13333 235666
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 98 ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 78899999999999999873
No 52
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=57.00 E-value=57 Score=28.37 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=49.3
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|-++.|+--.+-.+.++-..+++-..+.|+-- ++|| ..+.|.||-. +...+ +-+..+- ..+-..+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 45566664334345666667777777777743 4454 2345555522 22222 2222221 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999998874
No 53
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=56.34 E-value=63 Score=28.81 Aligned_cols=85 Identities=14% Similarity=0.060 Sum_probs=50.9
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+.-.+-.+.++-..+++-..+.|+- +++||. .+.|.||-. +...+ +.+..+- ..+-..
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 36667777444444666666777776677763 344552 345665522 22222 2222221 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 115 ai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999999884
No 54
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=56.09 E-value=59 Score=28.15 Aligned_cols=84 Identities=18% Similarity=0.115 Sum_probs=50.3
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+--.+-.+.++-..+++-..+.|+-- +.||. .+.|.||-. +...+ +-+.++- ..+-..+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 45566764334345666667777777777743 44542 345665532 22232 2333332 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 88 i~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999883
No 55
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=55.62 E-value=48 Score=29.15 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=51.3
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+.-.+-.+.++-..+++-..+.|+- ++.|| ..+.|.||-. +...+ +-+..+- ..+-..
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 35666776544445666667777777777764 44444 2345665522 22232 2222221 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 107 ai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 78999999999999999974
No 56
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=55.22 E-value=58 Score=28.35 Aligned_cols=83 Identities=14% Similarity=0.095 Sum_probs=49.2
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHH-------HhhcCCceeEEEEe---ecCHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEV-------AASCNAVRFYQLYV---FKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleei-------a~~~~~~~wfQLy~---~~dr~~ 168 (239)
|.++.|+--.+-.+.++-..+++-..+.|+-- +.|| ..+.|.||- .+...+. ..++. ..+-..
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gr--vpViaGvg~~~t~~ 94 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGK--IKLIAHVGCVSTAE 94 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTT--SEEEEECCCSSHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCC--CcEEEecCCCCHHH
Confidence 45566764344445666667777777777733 4454 234556552 2222321 13333 225566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 95 ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEecC
Confidence 78889999999999998884
No 57
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=54.39 E-value=61 Score=28.01 Aligned_cols=83 Identities=16% Similarity=0.031 Sum_probs=49.1
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhh-cCCce--eecC---CCCCcHHHHH-------hhcCCceeEEEEe---ecCHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAAS-CNTIM--VLSF---TSSSSIEEVA-------ASCNAVRFYQLYV---FKKRD 167 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~-~gi~~--~lSs---~ss~sleeia-------~~~~~~~wfQLy~---~~dr~ 167 (239)
|.++.|+--.+-.+.++-..+++-..+ .|+-- +.|| ..+.|.||-. +...+. ..++. ..+-.
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr--vpviaGvg~~~t~ 86 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQ--IALIAQVGSVNLK 86 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTS--SEEEEECCCSCHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCC--CeEEEecCCCCHH
Confidence 555667643343456666677776666 77643 3444 3345665532 222321 13333 22556
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 026410 168 IAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTV 188 (239)
.+.++.+.|+++|++++++..
T Consensus 87 ~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECC
Confidence 678889999999999998884
No 58
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=54.17 E-value=47 Score=29.23 Aligned_cols=85 Identities=13% Similarity=-0.056 Sum_probs=52.2
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+--.+-.+.++-..+++-..+.|+-- +.|| ..+.|.||-. +...+ +-+.++- ..+-..
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 466667775444456667677888777788743 3444 2344565522 22222 2233321 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 108 ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999999864
No 59
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=53.98 E-value=43 Score=28.94 Aligned_cols=86 Identities=14% Similarity=0.052 Sum_probs=51.5
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHHh---h----cCCceeEEEEeecCHHHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVAA---S----CNAVRFYQLYVFKKRDIAAT 171 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia~---~----~~~~~wfQLy~~~dr~~~~~ 171 (239)
|.++.|+--.+-.+.++-..+++-..+.|+-- +.|| ..+.|.||-.+ . ..+ -+.++- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 45566764444446666677777777777743 4454 23456665322 2 223 222211 235566788
Q ss_pred HHHHHHHcCCcEEEEeecCCCC
Q 026410 172 LVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 172 li~rAe~aG~~AlvvTVD~p~~ 193 (239)
+.+.|+++|++++++. +|..
T Consensus 83 la~~A~~~Gadavlv~--~P~y 102 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSH--SPYY 102 (288)
T ss_dssp HHHHHHTSCCSEEEEC--CCCS
T ss_pred HHHHHHhcCCCEEEEc--CCcC
Confidence 9999999999999988 4544
No 60
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=53.57 E-value=60 Score=28.57 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=51.3
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCcee--ecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~--lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
.|.++.|+--.+-.+.++-..+++--.+.|+--+ +|| ..+.|.||-. +...+ +-+..+- ..+-..
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 3556667644444466666777777777787443 444 2334565522 22222 2233221 235677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 106 ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999998874
No 61
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=52.63 E-value=50 Score=28.63 Aligned_cols=86 Identities=19% Similarity=0.045 Sum_probs=50.2
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHHHh-------hcCCceeEEEEeecCHHHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEVAA-------SCNAVRFYQLYVFKKRDIAAT 171 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleeia~-------~~~~~~wfQLy~~~dr~~~~~ 171 (239)
|.++.|+.-.+-.+.++-..+++--.+.|+- ++.|| ..+.|.||-.+ ...+ -+.++- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4556676433444566666777776677764 34454 23456655322 2223 222221 225566788
Q ss_pred HHHHHHHcCCcEEEEeecCCCC
Q 026410 172 LVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 172 li~rAe~aG~~AlvvTVD~p~~ 193 (239)
+.+.|+++|++++++. +|..
T Consensus 83 la~~A~~~Gadavlv~--~P~y 102 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASY--APYY 102 (293)
T ss_dssp HHHHGGGSCCSEEEEE--CCCS
T ss_pred HHHHHHhcCCCEEEEc--CCCC
Confidence 8999999999999888 4544
No 62
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=52.10 E-value=79 Score=27.46 Aligned_cols=85 Identities=7% Similarity=-0.018 Sum_probs=50.7
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+.-.+-.+.++-..+++--.+.|+-- +.|| ..+.|.||-. +..++ +-+..+- ..+-..+
T Consensus 10 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 88 (300)
T 3eb2_A 10 PYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVADA 88 (300)
T ss_dssp EBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHH
T ss_pred EEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 55566764444445666667777666677633 3333 3345666522 22222 3344432 2356667
Q ss_pred HHHHHHHHHcCCcEEEEeec
Q 026410 170 ATLVQRAERNGFKALVLTAD 189 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD 189 (239)
.++.+.|+++|++++++..=
T Consensus 89 i~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 88999999999999988653
No 63
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=51.94 E-value=61 Score=27.81 Aligned_cols=82 Identities=7% Similarity=-0.010 Sum_probs=48.3
Q ss_pred CcceEeccccchhccCcHHHHHHHHHHhhcCCc-eeecCCC----------CCcHH---HHHhh----cCCceeEEEEee
Q 026410 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTI-MVLSFTS----------SSSIE---EVAAS----CNAVRFYQLYVF 163 (239)
Q Consensus 102 s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~-~~lSs~s----------s~sle---eia~~----~~~~~wfQLy~~ 163 (239)
..|+++.-.| ..++.-...++.+.++|.- ++-=+++ ..+.| ++.+. .+-+.+.-++..
T Consensus 93 ~~p~~~~i~g----~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAG----MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECC----SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCC----CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4576665432 1345557788888877744 2211111 01222 33322 233556666655
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 164 KKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 164 ~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
.+.+...+++++++++|+++|.++
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEec
Confidence 577777888999999999999875
No 64
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=50.91 E-value=29 Score=38.61 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=60.4
Q ss_pred cccccccC-CCCCCccee---ecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHh----
Q 026410 79 FRPRILVD-VSRIDLSTT---ILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA---- 150 (239)
Q Consensus 79 l~PRvL~d-v~~~Dtst~---llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~---- 150 (239)
|.||..+- -.+++++|. ++| ..||+.|||++.- .+..+|.|+.++|-.-+++.....+.|++.+
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 57777652 233445443 577 5899999997431 1445888999999998884444445554432
Q ss_pred ---hcC--CceeEEE-EeecC-HHHHHHHHHHHHHcCCcE--EEEeec
Q 026410 151 ---SCN--AVRFYQL-YVFKK-RDIAATLVQRAERNGFKA--LVLTAD 189 (239)
Q Consensus 151 ---~~~--~~~wfQL-y~~~d-r~~~~~li~rAe~aG~~A--lvvTVD 189 (239)
..+ .+.-+-+ |+..+ .+...++++.+.+.|++. +.++.-
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G 677 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAG 677 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESS
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCC
Confidence 221 2211222 22222 122468899999999998 555443
No 65
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=50.84 E-value=63 Score=28.28 Aligned_cols=82 Identities=12% Similarity=0.028 Sum_probs=51.0
Q ss_pred cceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHH-------HhhcCCceeEEEEe---ecCHH
Q 026410 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEV-------AASCNAVRFYQLYV---FKKRD 167 (239)
Q Consensus 103 ~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleei-------a~~~~~~~wfQLy~---~~dr~ 167 (239)
.|.++.|+.-.+-.+.++-..+++-..+.|+- +++|| ..+.|.||- .+..+. ..++. ..+-.
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~gr---vpViaGvg~~~t~ 89 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKS---MQVIVGVSAPGFA 89 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTT---SEEEEECCCSSHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCC---CcEEEecCCCCHH
Confidence 35566676544444666667777777778874 44444 234556552 222321 23443 23567
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 026410 168 IAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvT 187 (239)
.+.++.+.|+++|++++++.
T Consensus 90 ~ai~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 90 AMRRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 77889999999999999985
No 66
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=50.30 E-value=48 Score=28.82 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=48.5
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCcee--ecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~--lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+ -.+-.+.++-..+++--.+.|+--+ .|| ..+.|.||-. +...+ +-+.++- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4556666 4444566666777777667776433 344 3345565521 22222 2222321 2245667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8889999999999998873
No 67
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=48.87 E-value=72 Score=27.55 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=48.6
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHH-------HhhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleei-------a~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+.-. -.+.++-..+++--.+.|+- ++.|| ..+.|.||- .+...+ +.+..+- ..+-..+
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 4556676434 34666667777777777763 33344 234455552 122222 2222221 2356667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 87 i~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8889999999999998874
No 68
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=48.02 E-value=73 Score=28.23 Aligned_cols=84 Identities=20% Similarity=0.114 Sum_probs=48.9
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+--.+-.+.++-..+++-..+.|+-- ++||. .+.|.||-. +...+ +-+..+- ..+-..+
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 45556664334345666667777666667643 44542 345555522 22232 2222321 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 119 i~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999998873
No 69
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=47.99 E-value=17 Score=31.13 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=50.5
Q ss_pred cccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecC-CCCC----cHHHHHhhcC----CceeEEEEeecCHHHH
Q 026410 99 YKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSF-TSSS----SIEEVAASCN----AVRFYQLYVFKKRDIA 169 (239)
Q Consensus 99 ~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs-~ss~----sleeia~~~~----~~~wfQLy~~~dr~~~ 169 (239)
..+..|+.+-.+.+.. .+-...+.++-++.|+-.++.. .-+. -+|.++...+ .+.|- +|+
T Consensus 60 ~~LGIpl~~v~~~g~~---~~e~e~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW~-----~d~--- 128 (237)
T 3rjz_A 60 RALGIPLVKGFTQGEK---EKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWG-----RDA--- 128 (237)
T ss_dssp HHHTCCEEEEEC---------CHHHHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTTCEEECSSSS-----CCH---
T ss_pred HHcCCCEEEEECCCCc---hHHHHHHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcCCEEEccccC-----CCH---
Confidence 3455677776654321 1113466677777777655543 2222 3566665553 23442 243
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCC
Q 026410 170 ATLVQRAERNGFKALVLTADTPRLGR 195 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD~p~~g~ 195 (239)
.+++++..++|++|+++.||+..++.
T Consensus 129 ~~Ll~e~i~~G~~aiiv~v~~~gL~~ 154 (237)
T 3rjz_A 129 KEYMRELLNLGFKIMVVGVSAYGLDE 154 (237)
T ss_dssp HHHHHHHHHTTCEEEEEEEESTTCCG
T ss_pred HHHHHHHHHCCCEEEEEEEecCCCCh
Confidence 47888889999999999999877653
No 70
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=47.33 E-value=1.5e+02 Score=26.60 Aligned_cols=21 Identities=10% Similarity=0.373 Sum_probs=16.9
Q ss_pred ceeecCcccCcceEeccccch
Q 026410 93 STTILDYKISAPIIIAPTALH 113 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~~ 113 (239)
..+|=+.+++-.|++|||+..
T Consensus 19 P~~ig~~~l~NRiv~aPm~~~ 39 (376)
T 1icp_A 19 PCKMGKFELCHRVVLAPLTRQ 39 (376)
T ss_dssp CEEETTEEESCSEEECCCCCC
T ss_pred CeeECCEEECCccEECCcCcC
Confidence 356778889999999998754
No 71
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=47.01 E-value=75 Score=27.91 Aligned_cols=84 Identities=8% Similarity=-0.064 Sum_probs=49.1
Q ss_pred ceEecccc-chhccCcHHHHHHHHHHhhcCCc--eeecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 104 PIIIAPTA-LHKLANPEGEVATARAAASCNTI--MVLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g-~~~l~hp~gE~alArAA~~~gi~--~~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
|-++.|+. -.+-.+.++-..+++--.+.|+- +++|| ..+.|.||-. +...+ +-+..+- ..+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 44566664 34444566667777777777774 33444 2344555522 22222 2233321 235666
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 95 ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 78889999999999988854
No 72
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=46.93 E-value=1.7e+02 Score=26.60 Aligned_cols=21 Identities=14% Similarity=0.349 Sum_probs=16.6
Q ss_pred ceeecCcccCcceEeccccch
Q 026410 93 STTILDYKISAPIIIAPTALH 113 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~~ 113 (239)
..+|=+.+++-.|+.|||+..
T Consensus 21 P~~ig~~~L~NRiv~aPm~~~ 41 (402)
T 2hsa_B 21 PYKMGKFNLSHRVVLAPMTRC 41 (402)
T ss_dssp CEEETTEEESCSEEECCCCCC
T ss_pred CeeECCEEecCCeEECCCCCC
Confidence 356777888899999998654
No 73
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=46.65 E-value=20 Score=33.75 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=59.6
Q ss_pred hcccccccccccC-CCCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhh
Q 026410 74 FHRITFRPRILVD-VSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (239)
Q Consensus 74 f~ri~l~PRvL~d-v~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~ 151 (239)
|+.+.|.|..-.- -+++|++|.+- +..+..||+.|||... .+.|++.+- |+.-|+.++-. +.+.|+.++.
T Consensus 13 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtV----Te~~ma~a~-a~~GGiGvI~~---n~s~e~qa~~ 84 (496)
T 4fxs_A 13 FDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTV----TEARLAIAL-AQEGGIGFIHK---NMSIEQQAAQ 84 (496)
T ss_dssp GGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTT----CSHHHHHHH-HHHTCEEEECS---SSCHHHHHHH
T ss_pred cccEEEecCccccccccccccceeccccccCCCceecCcchh----hHHHHHHHH-HHcCCcceecC---CCCHHHHHHH
Confidence 8999999974321 13678888774 6778999999998532 234444332 33445555433 3445443221
Q ss_pred -------cC----CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q 026410 152 -------CN----AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTAD 189 (239)
Q Consensus 152 -------~~----~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD 189 (239)
.. .+.| +.. ..-..+.++...+.++..+.|+=+
T Consensus 85 V~~Vk~~~~~m~~d~v~----v~~-~~tv~ea~~~m~~~~~s~~PVvd~ 128 (496)
T 4fxs_A 85 VHQVKIFEAGVVTHPVT----VRP-EQTIADVMELTHYHGFAGFPVVTE 128 (496)
T ss_dssp HHHHHHCCC--CBCCCC----BCS-SSBHHHHHHHHTSSCCCEEEEECS
T ss_pred HHhccccccccccCceE----ECC-CCCHHHHHHHHHHcCCcEEEEEcc
Confidence 11 1212 122 233456677777889998888643
No 74
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=46.17 E-value=1.1e+02 Score=27.68 Aligned_cols=84 Identities=12% Similarity=-0.034 Sum_probs=52.1
Q ss_pred CcceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCCceeEEEEe---ecCH
Q 026410 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNAVRFYQLYV---FKKR 166 (239)
Q Consensus 102 s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~~~wfQLy~---~~dr 166 (239)
-.|-++.|+.-.+-.+.++-..+++--.+.|+- +++||. .+.|.||-. +..++. ..++. ..+-
T Consensus 63 i~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~gr--vpViaGvg~~st 140 (360)
T 4dpp_A 63 VITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGS--IKVIGNTGSNST 140 (360)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTT--SEEEEECCCSSH
T ss_pred eEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCC--CeEEEecCCCCH
Confidence 346667787555545666667777777777774 334442 334555522 222321 13443 2356
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 026410 167 DIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvT 187 (239)
..+.++.+.|+++|++|+++.
T Consensus 141 ~eai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 141 REAIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEc
Confidence 777899999999999999987
No 75
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=46.15 E-value=1.3e+02 Score=28.67 Aligned_cols=20 Identities=0% Similarity=-0.006 Sum_probs=16.5
Q ss_pred ceeecCcccCcceEeccccc
Q 026410 93 STTILDYKISAPIIIAPTAL 112 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~ 112 (239)
..+|=+.+++-+|++|||+.
T Consensus 8 p~~ig~~~l~nRi~~apm~~ 27 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHT 27 (671)
T ss_dssp CEECSSCEESSSEEECCCCC
T ss_pred CeeECCEEEcCceEECCccC
Confidence 35677888999999999875
No 76
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=46.11 E-value=18 Score=26.27 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeecCCC
Q 026410 167 DIAATLVQRAERNGFKALV-LTADTPR 192 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~Alv-vTVD~p~ 192 (239)
+..++++++|++.|+.|++ +.+|+..
T Consensus 35 ~A~~rm~e~A~~lGAnAVVgvr~d~~~ 61 (81)
T 2jz7_A 35 EIVENLRKQVKAKGGMGLIAFRITCAD 61 (81)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEEccc
Confidence 4458999999999999975 4445443
No 77
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=44.82 E-value=60 Score=28.04 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=45.4
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+.-.+-.+.++-..+++-..+.|+-- +.|| ..+.|.||-. +...+ +-+.++- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 44556664333345555566666666666633 3444 2334555421 22222 2222221 2245666
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7888888889999888874
No 78
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.77 E-value=1.1e+02 Score=26.60 Aligned_cols=84 Identities=13% Similarity=-0.003 Sum_probs=49.9
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+.-.+-.+.++-..+++-..+.|+- ++.||. .+.|.||-. +...+ +-+..+- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566676544444666667777777777774 444442 334555522 22222 2222221 2356667
Q ss_pred HHHHHHHHHcCC-cEEEEee
Q 026410 170 ATLVQRAERNGF-KALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~-~AlvvTV 188 (239)
.++.+.|+++|+ +++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 888999999997 9988874
No 79
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=44.31 E-value=84 Score=27.50 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=48.4
Q ss_pred ceEeccccc-hhccCcHHHHHHHHHHhhcCCceee--cC---CCCCcHHHH-------HhhcCC--ceeEEEEeecCHHH
Q 026410 104 PIIIAPTAL-HKLANPEGEVATARAAASCNTIMVL--SF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 104 Pi~iaP~g~-~~l~hp~gE~alArAA~~~gi~~~l--Ss---~ss~sleei-------a~~~~~--~~wfQLy~~~dr~~ 168 (239)
|.++.|+.- .+-.+.++-..+++--.+.|+--++ || ..+.|.||- .+...+ +.+..+= .+-..
T Consensus 17 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ 94 (316)
T 3e96_A 17 GIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATST 94 (316)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHH
Confidence 555667654 4444566667777777777774433 33 233455542 122222 3344442 36666
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 026410 169 AATLVQRAERNGFKALVLT 187 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvT 187 (239)
+.++.+.|+++|++|+++.
T Consensus 95 ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEc
Confidence 7788888888999998876
No 80
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=44.15 E-value=1e+02 Score=26.52 Aligned_cols=84 Identities=18% Similarity=0.045 Sum_probs=49.1
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|-++.|+--.+-.+.++-..+++-.-+.|+- ++.||. .+.|.||-. +...+ +-+.++- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4556676444444566666777766666764 334442 334566522 22222 2222221 2356677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999998873
No 81
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=43.93 E-value=1.2e+02 Score=29.33 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=16.9
Q ss_pred ceeecCcccCcceEeccccc
Q 026410 93 STTILDYKISAPIIIAPTAL 112 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~ 112 (239)
..+|-|.+++-+|++|||+.
T Consensus 12 p~~ig~~~l~NRiv~apm~~ 31 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCI 31 (729)
T ss_dssp CEEETTEEESSSEEECCCCC
T ss_pred CeeECCEEECCccEECCCcC
Confidence 36778899999999999864
No 82
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=43.73 E-value=63 Score=21.87 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=25.0
Q ss_pred CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEE
Q 026410 154 AVRFYQLYVFKKRDIAATLVQRAERNGFKALVL 186 (239)
Q Consensus 154 ~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alvv 186 (239)
+..|.|+-.+.+++..+.+.++....|+.+.++
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~ 40 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVL 40 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEe
Confidence 457778877888877777777777778777765
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=43.71 E-value=1.8e+02 Score=27.81 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=16.4
Q ss_pred ceeecCcccCcceEeccccc
Q 026410 93 STTILDYKISAPIIIAPTAL 112 (239)
Q Consensus 93 st~llG~~~s~Pi~iaP~g~ 112 (239)
..+|=+.+++-+|+.|||+.
T Consensus 17 p~~ig~~~l~NRiv~apm~~ 36 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCN 36 (690)
T ss_dssp CCEETTEECSSSEEECCCCC
T ss_pred CeeECCEEECCCeEeCCCcC
Confidence 36677899999999999854
No 84
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=43.66 E-value=47 Score=31.28 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=58.6
Q ss_pred hccccccccccc-CCCCCCcceeec-CcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHH--
Q 026410 74 FHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA-- 149 (239)
Q Consensus 74 f~ri~l~PRvL~-dv~~~Dtst~ll-G~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia-- 149 (239)
|+++.|.|..-. .-+++|++|.+- +..+..|++-|||... .+.+ +|-+-.+.|-.-++. ...++++.+
T Consensus 37 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~Mdtv----Te~~--lAia~a~~GgiGvIh--~~~~~~~q~~~ 108 (511)
T 3usb_A 37 FDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTV----TEAD--MAIAMARQGGLGIIH--KNMSIEQQAEQ 108 (511)
T ss_dssp GGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTT----CSHH--HHHHHHHHTCEEEEC--SSSCHHHHHHH
T ss_pred eEEEEEECCcccccccceEeeeEeecccccCCCccccCchhh----cHHH--HHHHHHhcCCceeec--ccCCHHHHHHH
Confidence 889999997432 124578888765 5678899999998532 1233 333333333333343 234454432
Q ss_pred --hhc-C-CceeEE-EEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q 026410 150 --ASC-N-AVRFYQ-LYVFKKRDIAATLVQRAERNGFKALVLTAD 189 (239)
Q Consensus 150 --~~~-~-~~~wfQ-Ly~~~dr~~~~~li~rAe~aG~~AlvvTVD 189 (239)
+.- . ....-. +.+.. ..-..+.++...+.++..+.|+=+
T Consensus 109 V~~V~~~~~~m~~d~v~l~~-~~tv~ea~~~m~~~~~s~~pVvd~ 152 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTP-EHQVYDAEHLMGKYRISGVPVVNN 152 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCT-TSBHHHHHHHHHHHCCSEEEEESC
T ss_pred HHHhhccccccccCCEEECC-CCCHHHHHHHHHHcCCcEEEEEec
Confidence 211 1 100000 12222 233467777777889999988743
No 85
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=43.39 E-value=78 Score=36.71 Aligned_cols=105 Identities=19% Similarity=0.272 Sum_probs=62.5
Q ss_pred cccccccCC-CC--CCcc-eeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHH------
Q 026410 79 FRPRILVDV-SR--IDLS-TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV------ 148 (239)
Q Consensus 79 l~PRvL~dv-~~--~Dts-t~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleei------ 148 (239)
|.||+.+.- .. .++. +++|| ..||+.+||++.. .. ..+|.|..++|-.-.++...-.+.+++
T Consensus 403 f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-s~----~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~ 474 (3089)
T 3zen_D 403 YAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-VD----AKIVAAAANAGHWAELAGGGQVTEQIFNDRIAE 474 (3089)
T ss_dssp GCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-TS----HHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHH
T ss_pred cCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-CC----HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHH
Confidence 777766532 22 2333 45788 7799999997542 12 357888888888888865544344443
Q ss_pred -HhhcC-Ccee--EEEEeecCH---HH-HHHHHHHHHHcC--CcEEEEeecCC
Q 026410 149 -AASCN-AVRF--YQLYVFKKR---DI-AATLVQRAERNG--FKALVLTADTP 191 (239)
Q Consensus 149 -a~~~~-~~~w--fQLy~~~dr---~~-~~~li~rAe~aG--~~AlvvTVD~p 191 (239)
++..+ +..+ =-+|..... .+ .+++++.+.++| +++++++-+.|
T Consensus 475 ~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P 527 (3089)
T 3zen_D 475 LETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIP 527 (3089)
T ss_dssp HHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCC
T ss_pred HHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 22232 2111 122332211 11 157899999999 66799988877
No 86
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=43.20 E-value=20 Score=26.89 Aligned_cols=28 Identities=18% Similarity=0.219 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCCCC
Q 026410 166 RDIAATLVQRAERNGFKALV-LTADTPRL 193 (239)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p~~ 193 (239)
++...+|.++|++.|+.||+ |.+|....
T Consensus 59 ~~A~~rm~~~A~~lGAnAVVgvr~d~~~i 87 (103)
T 1vr4_A 59 DIAMDEMKELAKQKGANAIVGVDVDYEVV 87 (103)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeee
Confidence 34558899999999999975 66665443
No 87
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=42.22 E-value=21 Score=27.41 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCC
Q 026410 166 RDIAATLVQRAERNGFKALV-LTADTP 191 (239)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p 191 (239)
.+...+|+++|++.|+.||+ |.+|+.
T Consensus 61 ~eA~~rM~e~A~~lGANAVIgvrfdts 87 (111)
T 3qkb_A 61 DEAKQKLKKKADLLEGDGIIGLKYNTE 87 (111)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEhh
Confidence 34557999999999999975 555543
No 88
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=40.42 E-value=54 Score=30.19 Aligned_cols=104 Identities=19% Similarity=0.239 Sum_probs=57.9
Q ss_pred Hhccccccccccc-CCCCCCcceeecC-cccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHh
Q 026410 73 AFHRITFRPRILV-DVSRIDLSTTILD-YKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (239)
Q Consensus 73 af~ri~l~PRvL~-dv~~~Dtst~llG-~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~ 150 (239)
.|+.+.|+|.-.. +-.++|++++|-. ..+..||+.+||... . +.|++ .+..+.|-.-.+.. ..+.+++++
T Consensus 13 ~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~v--t--~~eLa--~av~~~Gg~G~i~~--~~~~e~~~~ 84 (491)
T 1zfj_A 13 TFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTV--T--GSKMA--IAIARAGGLGVIHK--NMSITEQAE 84 (491)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTT--C--SHHHH--HHHHHTTCEEEECC--SSCHHHHHH
T ss_pred ChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhc--c--HHHHH--HHHHHcCCceEEeC--CCCHHHHHH
Confidence 4899999998654 3367888887643 467899999998732 1 23333 34444443333332 244544332
Q ss_pred h-------cC--CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 151 S-------CN--AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 151 ~-------~~--~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
. .. ....+ .+..+ .-..+.++...+.+...+.|.
T Consensus 85 ~i~~v~~~~~im~~~~~--~v~~~-~tv~ea~~~m~~~~~~~~pVv 127 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDPF--FLTPE-HKVSEAEELMQRYRISGVPIV 127 (491)
T ss_dssp HHHHHHHHTTTTSSSCC--CBCSS-SBHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHhhHHhcCcCCCe--EECCC-CcHHHHHHHHHHcCCCEEEEE
Confidence 1 11 11111 12222 224566677777788888775
No 89
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=40.39 E-value=55 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhh
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss~sleeia~~ 151 (239)
.+|-..+.+.+++.|++++.+-+...+++.+++.
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~ 189 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY 189 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh
Confidence 3555788888889999998888877777776554
No 90
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=39.04 E-value=49 Score=27.72 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhcCC--ceeecCCCCCcHHHHHhhcCCceeEEE------------------------EeecCHHHHHHHH
Q 026410 120 GEVATARAAASCNT--IMVLSFTSSSSIEEVAASCNAVRFYQL------------------------YVFKKRDIAATLV 173 (239)
Q Consensus 120 gE~alArAA~~~gi--~~~lSs~ss~sleeia~~~~~~~wfQL------------------------y~~~dr~~~~~li 173 (239)
-+..+++.-++.|. ..+++|+....++.+++..|...-..+ +.+.....+.+++
T Consensus 118 ~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 197 (250)
T 3ks6_A 118 FVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLM 197 (250)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHHH
Confidence 34445555555443 456666666666666655553211111 1111223345777
Q ss_pred HHHHHcCCcEEEEeecCC
Q 026410 174 QRAERNGFKALVLTADTP 191 (239)
Q Consensus 174 ~rAe~aG~~AlvvTVD~p 191 (239)
+++.++|.+..+-|||.+
T Consensus 198 ~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 198 AQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp HHHHHTTCEEEEECCCSH
T ss_pred HHHHHCCCEEEEEeCCCH
Confidence 778888888888887754
No 91
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=39.01 E-value=66 Score=27.97 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhh
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss~sleeia~~ 151 (239)
.+|-..+.+.+++.|++++.+-+...+++.+.+.
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 121 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY 121 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh
Confidence 5777889999999999999988888888777554
No 92
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=38.30 E-value=1.9e+02 Score=25.21 Aligned_cols=83 Identities=16% Similarity=0.077 Sum_probs=44.9
Q ss_pred ceEeccc-cchhccCcHHHHHHHHHHhhcCCcee--ecC---CCCCcHHHHH-------hhcCC--ceeEEEEeecCHHH
Q 026410 104 PIIIAPT-ALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEVA-------ASCNA--VRFYQLYVFKKRDI 168 (239)
Q Consensus 104 Pi~iaP~-g~~~l~hp~gE~alArAA~~~gi~~~--lSs---~ss~sleeia-------~~~~~--~~wfQLy~~~dr~~ 168 (239)
|.++.|+ --.+-.+.++-..+++-..+.|+--+ +|| ..+.|.||-. +...+ +-+..+- . +-..
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 4445565 33333455555666666666666433 333 2344555421 22222 2233332 2 5556
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
+.++.+.|+++|++++++..
T Consensus 95 ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 67788888888888888773
No 93
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=38.19 E-value=1.6e+02 Score=25.23 Aligned_cols=84 Identities=10% Similarity=0.045 Sum_probs=48.3
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCcee--ecC---CCCCcHHHH-------HhhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~--lSs---~ss~sleei-------a~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+ -.+-.+.++-..+++-..+.|+--+ .|| ..+.|.||- .+...+ +-+.++- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4455666 4444566666777777667776443 343 234555542 122222 2222321 2245667
Q ss_pred HHHHHHHHHcCCcEEEEeec
Q 026410 170 ATLVQRAERNGFKALVLTAD 189 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD 189 (239)
.++.+.|+++|++++++..=
T Consensus 85 i~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 78889999999999888753
No 94
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=37.98 E-value=1.6e+02 Score=25.41 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=51.1
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCcee--ecCC---CCCcHHHHH-------hhcCC-ceeEEEEe---ecCHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSFT---SSSSIEEVA-------ASCNA-VRFYQLYV---FKKRD 167 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~--lSs~---ss~sleeia-------~~~~~-~~wfQLy~---~~dr~ 167 (239)
|.++.|+ -.+-.+.++-..+++--.+.|+--+ .||. .+.|.||-. +...+ . ..++. ..+-.
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~r--vpviaGvg~~~t~ 90 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTK--VKVLAGAGSNATH 90 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSS--CEEEEECCCSSHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC--CeEEEeCCCCCHH
Confidence 5566677 4554566676777777777787443 3432 334565522 22233 1 23443 23567
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 026410 168 IAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTV 188 (239)
.+.++.+.|+++|++++++..
T Consensus 91 ~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 778999999999999999974
No 95
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.54 E-value=1.5e+02 Score=25.46 Aligned_cols=84 Identities=17% Similarity=0.024 Sum_probs=50.7
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCc--eeecCC---CCCcHHHHH-------hhcCC--ceeEEEEeecCHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEVA-------ASCNA--VRFYQLYVFKKRDIA 169 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~--~~lSs~---ss~sleeia-------~~~~~--~~wfQLy~~~dr~~~ 169 (239)
|.++.|+--.+-.+.++-..+++--.+.|+- ++.||. .+.|.||-. +...+ +-+..+- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566676544444666667777777777875 333442 334565522 22222 2222221 2356777
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026410 170 ATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (239)
.++.+.|+++|++++++..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999999874
No 96
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=37.44 E-value=58 Score=30.20 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=31.4
Q ss_pred hccccccccccc-CCCCCCcceeecC-cccCcceEeccccc
Q 026410 74 FHRITFRPRILV-DVSRIDLSTTILD-YKISAPIIIAPTAL 112 (239)
Q Consensus 74 f~ri~l~PRvL~-dv~~~Dtst~llG-~~~s~Pi~iaP~g~ 112 (239)
|+.+.|.|..-. ..+++|+++++-+ ..+..||+.+|+..
T Consensus 17 ~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~ 57 (486)
T 2cu0_A 17 FDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDT 57 (486)
T ss_dssp GGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTT
T ss_pred ccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEcccee
Confidence 889999998654 4468899998854 68899999999863
No 97
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.33 E-value=1.6e+02 Score=23.79 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=54.8
Q ss_pred eecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecC-CCCCcHHHHHhhcCCceeEEEEeecCHHHHHHHH
Q 026410 95 TILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSF-TSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLV 173 (239)
Q Consensus 95 ~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs-~ss~sleeia~~~~~~~wfQLy~~~dr~~~~~li 173 (239)
.++-..++.||.-=|+.+.. -=.++.+|-+..+-..+++- .....++.+.+..+- . ++.|...+.+...+.+
T Consensus 63 ~~lr~~~~iPVV~I~~s~~D-----il~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~-~-i~~~~~~~~~e~~~~i 135 (196)
T 2q5c_A 63 DYIKKSVSIPSISIKVTRFD-----TMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGV-K-IKEFLFSSEDEITTLI 135 (196)
T ss_dssp HHHHTTCSSCEEEECCCHHH-----HHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTC-E-EEEEEECSGGGHHHHH
T ss_pred HHHHHhCCCCEEEEcCCHhH-----HHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCC-c-eEEEEeCCHHHHHHHH
Confidence 34455577888876654433 33456555554443344443 334567777766652 1 3667788888889999
Q ss_pred HHHHHcCCcEEE
Q 026410 174 QRAERNGFKALV 185 (239)
Q Consensus 174 ~rAe~aG~~Alv 185 (239)
+++++.|+++++
T Consensus 136 ~~l~~~G~~vvV 147 (196)
T 2q5c_A 136 SKVKTENIKIVV 147 (196)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHCCCeEEE
Confidence 999999999976
No 98
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=35.44 E-value=66 Score=21.76 Aligned_cols=34 Identities=35% Similarity=0.496 Sum_probs=27.0
Q ss_pred CceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 154 AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 154 ~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
+....++=++.+++...+++++.++.|++++++.
T Consensus 44 ~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~iv~ 77 (79)
T 1x60_A 44 GLYKVQIGAFSSKDNADTLAARAKNAGFDAIVIL 77 (79)
T ss_dssp TEEEEEEEEESSHHHHHHHHHHHHHHTSCCEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHHcCCceEEEe
Confidence 3344555567899999999999999999998875
No 99
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=35.40 E-value=41 Score=29.65 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCC----CcHHHHH-------hhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEE
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSS----SSIEEVA-------ASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVL 186 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss----~sleeia-------~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alvv 186 (239)
.+.=.++.+||++.+.|.++..... .+++.++ +..+-+-.+.| |.....+.+++|.++||.-+++
T Consensus 28 ~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMi 103 (286)
T 1gvf_A 28 AETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHL----DHHESLDDIRRKVHAGVRSAMI 103 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEE----EEECCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEc----CCCCCHHHHHHHHHcCCCeEEE
Confidence 3445788899999999888865332 1333322 22233344444 4444467788888899988876
Q ss_pred eec
Q 026410 187 TAD 189 (239)
Q Consensus 187 TVD 189 (239)
+--
T Consensus 104 DgS 106 (286)
T 1gvf_A 104 DGS 106 (286)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
No 100
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=35.29 E-value=48 Score=31.00 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=29.7
Q ss_pred hcccccccccccC-CCCCCcceeec-CcccCcceEeccccc
Q 026410 74 FHRITFRPRILVD-VSRIDLSTTIL-DYKISAPIIIAPTAL 112 (239)
Q Consensus 74 f~ri~l~PRvL~d-v~~~Dtst~ll-G~~~s~Pi~iaP~g~ 112 (239)
|+.+.|.|..-.- -+++|++|.+- +..+..|++.|||..
T Consensus 12 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~t 52 (490)
T 4avf_A 12 FDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDT 52 (490)
T ss_dssp GGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTT
T ss_pred cceEEEeCCCCcccccceeeecccccCcccCCCccccchhh
Confidence 8999999975431 13688888875 678999999999853
No 101
>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1
Probab=35.01 E-value=27 Score=27.49 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCCCCC
Q 026410 166 RDIAATLVQRAERNGFKALV-LTADTPRLG 194 (239)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p~~g 194 (239)
++...+|.++|++.|+.||+ |.+|....|
T Consensus 83 ~~Al~rm~~~A~~lGAnAVVGvr~d~~~i~ 112 (133)
T 1y2i_A 83 EIAFEELGSQARALGADAVVGIDIDYETVG 112 (133)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeeec
Confidence 34568999999999999975 666655443
No 102
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=34.36 E-value=1.2e+02 Score=24.53 Aligned_cols=85 Identities=13% Similarity=0.043 Sum_probs=46.7
Q ss_pred cccCcceEeccccchhccCcHHHHHHHHHHhhcCCce---eecCC----CCCcHHHHHhhcC--Cce--eEEEEeecCHH
Q 026410 99 YKISAPIIIAPTALHKLANPEGEVATARAAASCNTIM---VLSFT----SSSSIEEVAASCN--AVR--FYQLYVFKKRD 167 (239)
Q Consensus 99 ~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~---~lSs~----ss~sleeia~~~~--~~~--wfQLy~~~dr~ 167 (239)
....++|.++......+ +- ....+.++++|.-. ..... +...++++++... +.. -+..+..+..+
T Consensus 14 ~~~~~klg~~~~~~~~~---~~-~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~ 89 (257)
T 3lmz_A 14 AVNPFHLGMAGYTFVNF---DL-DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEE 89 (257)
T ss_dssp CCCSSEEEECGGGGTTS---CH-HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHH
T ss_pred CCCceEEEEEEEeecCC---CH-HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHH
Confidence 34457788887766543 12 23344444555432 22211 1112345544331 322 22223336778
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 026410 168 IAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvT 187 (239)
..++.++.|++.|++.|++.
T Consensus 90 ~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 90 EIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEec
Confidence 88999999999999999985
No 103
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=34.02 E-value=79 Score=28.16 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=44.9
Q ss_pred hhcCCceeecCCCCCcHHHHHhhcCC-----------ceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 129 ASCNTIMVLSFTSSSSIEEVAASCNA-----------VRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 129 ~~~gi~~~lSs~ss~sleeia~~~~~-----------~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
.+.+-.++.=......++++.+..|+ ..|+.+...-++....+++.+.+++||++|+++
T Consensus 228 ~A~~~~~l~~nvp~~~l~~v~~~lPg~~~PTVspL~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 297 (304)
T 1nh8_A 228 FGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLADPDWVAIRALVPRRDVNGIMDELAAIGAKAILAS 297 (304)
T ss_dssp HHTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECSSTTEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HhcceEEEEEeCCHHHHHHHHHhccCCCCCeeeecCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 33444555545556678999877541 358888888888899999999999999999886
No 104
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=32.94 E-value=32 Score=26.75 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=23.6
Q ss_pred ecCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCch
Q 026410 163 FKKRDIAATLVQRAERNGFKALVLTADTPRLGRRE 197 (239)
Q Consensus 163 ~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re 197 (239)
..|+++.+++++..+..|...+.+--|.---.+||
T Consensus 9 ssdpeilkeivreikrqgvrvvllysdqdekrrre 43 (162)
T 2l82_A 9 SSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRE 43 (162)
T ss_dssp ESCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHH
Confidence 56777777777777777777777776654433333
No 105
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.14 E-value=1.9e+02 Score=24.11 Aligned_cols=136 Identities=17% Similarity=0.152 Sum_probs=75.3
Q ss_pred CCHHHHHHHHHHhCChhh----hhhhcCCccchhcHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEecccc
Q 026410 36 VNLNEFQELARLALPKMY----YDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTA 111 (239)
Q Consensus 36 ~~l~D~e~~Ar~~Lp~~~----~~Y~~gGa~de~T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g 111 (239)
++..++.+.+++..+..- ...+.++-++.....+.. .+. -...++.. .=-+..++-..++.||.-=++.
T Consensus 19 ~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~--~~~--~~~dVIIS---RGgta~~Lr~~~~iPVV~I~vs 91 (225)
T 2pju_A 19 VSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKK--LAN--ERCDAIIA---AGSNGAYLKSRLSVPVILIKPS 91 (225)
T ss_dssp ECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHH--TTT--SCCSEEEE---EHHHHHHHHTTCSSCEEEECCC
T ss_pred EchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHH--Hhc--CCCeEEEe---CChHHHHHHhhCCCCEEEecCC
Confidence 456777777777666421 112334444444333222 111 00112211 0123345566788999876764
Q ss_pred chhccCcHHHHHHHHHHhhcCCceeecCCC-CCcHHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEE
Q 026410 112 LHKLANPEGEVATARAAASCNTIMVLSFTS-SSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALV 185 (239)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~gi~~~lSs~s-s~sleeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alv 185 (239)
+.. -=.++.+|-+..+-..+++-.. ...++.+.+..+- . ++.|...+.+...+.++++++.|++++|
T Consensus 92 ~~D-----il~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~-~-i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYD-----VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNL-R-LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHH-----HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTC-C-EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHH-----HHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCC-c-eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 433 2345555544444444444333 2345666665542 1 3668888999999999999999999976
No 106
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=31.98 E-value=26 Score=28.89 Aligned_cols=39 Identities=26% Similarity=0.415 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
....+.+++.+++|+++|++..++.... -..+|..+.+|
T Consensus 60 ~~l~~~~~~L~~~g~d~iviaCnTa~~~--~~~l~~~~~iP 98 (226)
T 2zsk_A 60 KILINAAKALERAGAELIAFAANTPHLV--FDDVQREVNVP 98 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSSGGGGG--HHHHHHHCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcHHHH--HHHHHHhCCCC
Confidence 3445667777899999999999998654 36777777777
No 107
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=31.10 E-value=54 Score=28.20 Aligned_cols=41 Identities=7% Similarity=-0.130 Sum_probs=28.6
Q ss_pred HHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcC-CcEEEEe
Q 026410 147 EVAASCNAVRFYQLYVFKKRDIAATLVQRAERNG-FKALVLT 187 (239)
Q Consensus 147 eia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG-~~AlvvT 187 (239)
+|+++.+-+.+.-+....+.+...+++++++++| +++|.++
T Consensus 154 ~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 154 QVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 3343333345656665556777788899999999 9999875
No 108
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=30.34 E-value=1.4e+02 Score=23.01 Aligned_cols=62 Identities=13% Similarity=0.090 Sum_probs=37.2
Q ss_pred hhcCCceeecCCCCCcHHHHHhh-cCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 026410 129 ASCNTIMVLSFTSSSSIEEVAAS-CNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 129 ~~~gi~~~lSs~ss~sleeia~~-~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
...|.+..+-+.....+.+.... .++...+=+-..+.-..+.+.++.|++.|++.|+||-+.
T Consensus 62 ~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~ 124 (187)
T 3sho_A 62 NSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSS 124 (187)
T ss_dssp HHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred HhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34677766544222222222222 244434334445555667888999999999999999653
No 109
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=30.14 E-value=36 Score=31.77 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=23.2
Q ss_pred cccccccccCCCCCCcceeecCcccCcceEecc
Q 026410 77 ITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (239)
Q Consensus 77 i~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP 109 (239)
+.+.|+.. ..+.+.++++++|.+++-||++|+
T Consensus 68 ~~~~~~~~-~~~~~~l~~~i~Gl~~~NPvglAA 99 (443)
T 1tv5_A 68 YNILPYDT-SNDSIYACTNIKHLDFINPFGVAA 99 (443)
T ss_dssp TTCSCCCC-SCCCGGGCEEETTEEESSSEEECT
T ss_pred ccCCcccc-cCCCccCCeEECCEEeCCCcEECC
Confidence 35555432 223456799999999999999995
No 110
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=30.08 E-value=19 Score=30.17 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
..+.+.+++.+++|+++|++..++....- ..+|..+.+|
T Consensus 63 ~~l~~~~~~L~~~g~~~iviaCNTa~~~~--~~l~~~~~iP 101 (231)
T 3ojc_A 63 QLLSNAAISLKHAGAEVIVVCTNTMHKVA--DDIEAACGLP 101 (231)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSGGGGGH--HHHHHHHCSC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCchHHHH--HHHHHhCCCC
Confidence 44567778888999999999999976543 6677777777
No 111
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=29.70 E-value=91 Score=26.73 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=28.3
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhh
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss~sleeia~~ 151 (239)
.+|-..+.+.+++.|++++..-+...+++.+.+.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 106 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY 106 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh
Confidence 6777899999999999999988887777776554
No 112
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.92 E-value=44 Score=28.33 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=26.9
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 170 ATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
.+.++++++.|++++++.+.+.. +. ..+|..+.+|
T Consensus 59 ~~~~~~l~~~g~d~iviaCnt~~-~l--~~lr~~~~iP 93 (245)
T 3qvl_A 59 LEQIRAGREQGVDGHVIASFGDP-GL--LAARELAQGP 93 (245)
T ss_dssp HHHHHHHHHHTCSEEEEC-CCCT-TH--HHHHHHCSSC
T ss_pred HHHHHHHHHCCCCEEEEeCCChh-HH--HHHHHHcCCC
Confidence 45567778899999999999865 44 6788878888
No 113
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=28.79 E-value=2.1e+02 Score=25.46 Aligned_cols=84 Identities=11% Similarity=0.035 Sum_probs=46.6
Q ss_pred ceEeccccchhccCcHHHHHHHHHHhhcCCce--eecC---CCCCcHHHHHh----hc-CC-ceeEEEEeecCHHHHHHH
Q 026410 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEVAA----SC-NA-VRFYQLYVFKKRDIAATL 172 (239)
Q Consensus 104 Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~--~lSs---~ss~sleeia~----~~-~~-~~wfQLy~~~dr~~~~~l 172 (239)
|.++.|+--.+-.+.++-..+++--.+.|+-- +.|| ..+.|.||-.+ .. +. +.+.++- ..+-..+.++
T Consensus 32 ~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg-~~st~eai~l 110 (344)
T 2hmc_A 32 PALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTG-AVNTASAVAH 110 (344)
T ss_dssp EBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECC-CSSHHHHHHH
T ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 44556664333345556566666666666633 3444 33455655322 11 21 2222221 2245667888
Q ss_pred HHHHHHcCCcEEEEee
Q 026410 173 VQRAERNGFKALVLTA 188 (239)
Q Consensus 173 i~rAe~aG~~AlvvTV 188 (239)
.+.|+++|++++++..
T Consensus 111 a~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHTCSEEEECC
T ss_pred HHHHHhcCCCEEEECC
Confidence 8999999999988873
No 114
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=28.54 E-value=48 Score=28.05 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRL 193 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (239)
+.+.+.+++|++.+.++|+|++|+|..
T Consensus 25 ~~l~~~l~~a~~~~~~~Ivl~inspGG 51 (230)
T 3viv_A 25 DQFDRYITIAEQDNAEAIIIELDTPGG 51 (230)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEBSCE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEeCCCc
Confidence 344566788888889999999999863
No 115
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.07 E-value=74 Score=29.08 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=26.9
Q ss_pred CCCCCcceeecCcccC---cceEeccccchhccCcHHHHHHHHHHhhcCCceee
Q 026410 87 VSRIDLSTTILDYKIS---APIIIAPTALHKLANPEGEVATARAAASCNTIMVL 137 (239)
Q Consensus 87 v~~~Dtst~llG~~~s---~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~l 137 (239)
...-|+.+++-|..+. .+++++|++.. ..+.-..+|++++++|..++.
T Consensus 124 ~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk 174 (385)
T 3nvt_A 124 NKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIR 174 (385)
T ss_dssp TCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEE
Confidence 3334555555444432 47888888765 234445566666666655553
No 116
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=27.94 E-value=42 Score=27.65 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEEeecCCC
Q 026410 169 AATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
.++++++|.+.|.++|++|==.+.
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~ 41 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPM 41 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCC
Confidence 358999999999999999864444
No 117
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=27.65 E-value=39 Score=27.56 Aligned_cols=23 Identities=22% Similarity=0.491 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 026410 169 AATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p 191 (239)
.++++++|++.|+++|++|==.+
T Consensus 20 ~~e~v~~A~~~Gl~~iaiTDH~~ 42 (245)
T 1m65_A 20 LSDYIAQAKQKGIKLFAITDHGP 42 (245)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECT
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 46999999999999999985433
No 118
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=27.64 E-value=46 Score=30.87 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=24.2
Q ss_pred ccccccccccCCCCCCcceeecCcccCcceEecc
Q 026410 76 RITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (239)
Q Consensus 76 ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP 109 (239)
++.+.|+. +..+.+.++++++|.+++-||++|.
T Consensus 69 ~~~~~~~~-~~~~~~~l~v~~~Gl~f~NPvglAA 101 (415)
T 3i65_A 69 KYNILPYD-TSNDSIYACTNIKHLDFINPFGVAA 101 (415)
T ss_dssp HTTCSCCC-CSCCCGGGCEEETTEEESSSEEECT
T ss_pred HhcCCCcc-cccccccccEEECCEECCCCCEECC
Confidence 34455543 2345566899999999999999986
No 119
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=27.44 E-value=25 Score=30.11 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=9.2
Q ss_pred HHHHHHHcCCcEE
Q 026410 172 LVQRAERNGFKAL 184 (239)
Q Consensus 172 li~rAe~aG~~Al 184 (239)
.+++++++|++.|
T Consensus 139 ~a~~~~~~gad~v 151 (264)
T 1xm3_A 139 LARKLEELGVHAI 151 (264)
T ss_dssp HHHHHHHHTCSCB
T ss_pred HHHHHHHhCCCEE
Confidence 4677777777766
No 120
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=27.28 E-value=74 Score=27.92 Aligned_cols=38 Identities=13% Similarity=0.264 Sum_probs=23.3
Q ss_pred HHHHHHHHHH---HHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 167 DIAATLVQRA---ERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 167 ~~~~~li~rA---e~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
+...++|+|| ++||+.+|++-. .| ..=-+.+...+.+|
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~-vp--~~~a~~it~~l~iP 198 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAGAAVVLMEC-VL--AELAKKVTETVSCP 198 (275)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEEES-CC--HHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec-CC--HHHHHHHHHhCCCC
Confidence 3346777777 479999999966 12 12223444556667
No 121
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=27.09 E-value=83 Score=27.11 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=46.1
Q ss_pred cCcceEeccccchhccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhc---CCceeEEEEeecCHHHHHHHHHHHH
Q 026410 101 ISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASC---NAVRFYQLYVFKKRDIAATLVQRAE 177 (239)
Q Consensus 101 ~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~---~~~~wfQLy~~~dr~~~~~li~rAe 177 (239)
++.||+.- ..+.++ -.+..|+++.+-+|..+.+......++++.+.. +-..|.-+ .+ .+.+++|.
T Consensus 112 v~lPvl~k----dfiid~-~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev---~t----~ee~~~A~ 179 (272)
T 3qja_A 112 VSIPVLRK----DFVVQP-YQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEV---HT----EQEADRAL 179 (272)
T ss_dssp CSSCEEEE----SCCCSH-HHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE---SS----HHHHHHHH
T ss_pred CCCCEEEC----ccccCH-HHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEc---CC----HHHHHHHH
Confidence 45677742 122222 246777888888888877776654555554433 32334433 22 34477888
Q ss_pred HcCCcEEEEe
Q 026410 178 RNGFKALVLT 187 (239)
Q Consensus 178 ~aG~~AlvvT 187 (239)
++|++-|.+|
T Consensus 180 ~~Gad~IGv~ 189 (272)
T 3qja_A 180 KAGAKVIGVN 189 (272)
T ss_dssp HHTCSEEEEE
T ss_pred HCCCCEEEEC
Confidence 8999999998
No 122
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=26.94 E-value=28 Score=30.03 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
+...+.+++.+++|+++|||..++.... -.++|..+.+|
T Consensus 86 ~~l~~~~~~L~~~Gad~IVIaCNTah~~--l~~lr~~~~iP 124 (268)
T 3s81_A 86 RYLERYLHMLEDAGAECIVIPCNTAHYW--FDDLQNVAKAR 124 (268)
T ss_dssp HHHHHHHHHHHHTTCSEEECSCSGGGGG--HHHHHHHCSSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCHHHH--HHHHHHHCCCC
Confidence 4567788999999999999999998662 56788888888
No 123
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=26.81 E-value=80 Score=27.44 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=23.9
Q ss_pred ceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q 026410 155 VRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 155 ~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (239)
+.+.-+-...+.+.+.++.++++++|+++|.|+-
T Consensus 213 Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 213 PIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4444433333445678889999999999999973
No 124
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=26.78 E-value=1.2e+02 Score=26.45 Aligned_cols=26 Identities=27% Similarity=0.503 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEeecCCCCC
Q 026410 166 RDIAATLVQRAERNGFK--ALVLTADTPRLG 194 (239)
Q Consensus 166 r~~~~~li~rAe~aG~~--AlvvTVD~p~~g 194 (239)
.+...+.+++|+++|.+ -|+++ |..|
T Consensus 162 ~~~l~~~i~~a~~~Gi~~~~IilD---Pg~g 189 (282)
T 1aj0_A 162 NRYFIEQIARCEQAGIAKEKLLLD---PGFG 189 (282)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE---CCTT
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe---CCCC
Confidence 45667889999999998 78888 5544
No 125
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=26.63 E-value=69 Score=26.74 Aligned_cols=25 Identities=20% Similarity=0.352 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeecCCC
Q 026410 168 IAATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
++.++++++.++|.+..+-|||.+.
T Consensus 198 ~~~~~v~~~~~~G~~v~~WTvn~~~ 222 (252)
T 3qvq_A 198 FDVQQVSDIKAAGYKVLAFTINDES 222 (252)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCCHH
T ss_pred CCHHHHHHHHHCCCEEEEEcCCCHH
Confidence 4467888899999999999988643
No 126
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.58 E-value=70 Score=27.63 Aligned_cols=23 Identities=30% Similarity=0.437 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 026410 169 AATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p 191 (239)
+.+++++|.++|.+..+-|||.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCCCSH
T ss_pred CHHHHHHHHHCCCEEEEEcCCCH
Confidence 46889999999999999999865
No 127
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=26.57 E-value=72 Score=23.77 Aligned_cols=39 Identities=5% Similarity=-0.017 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~ 205 (239)
.++..+++.|.+.|++.|.++|+..-.+-+.=-.|.||.
T Consensus 123 ~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 161 (188)
T 3h4q_A 123 ELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFH 161 (188)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCe
Confidence 445666677778899999999987765555556677884
No 128
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=26.24 E-value=69 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 171 TLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 171 ~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
+.+++.++.|+++|++.+.+. .+ ...+|..+.+|
T Consensus 66 ~~~~~l~~~g~d~iviaCnta-~~--~~~l~~~~~iP 99 (228)
T 2eq5_A 66 RLAKEFEREGVDAIIISCAAD-PA--VEKVRKLLSIP 99 (228)
T ss_dssp HHHHHHHHTTCSEEEECSTTC-TT--HHHHHHHCSSC
T ss_pred HHHHHHHHCCCCEEEEeCCch-HH--HHHHHHhCCCC
Confidence 345567789999999999988 44 44566666777
No 129
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=26.22 E-value=2.8e+02 Score=25.59 Aligned_cols=75 Identities=16% Similarity=0.107 Sum_probs=47.3
Q ss_pred cCcHHHHHHHHHHhhcCCceeecCCCC--------Cc--HHHHHhh-------c--C-CceeEEEEeecCH---------
Q 026410 116 ANPEGEVATARAAASCNTIMVLSFTSS--------SS--IEEVAAS-------C--N-AVRFYQLYVFKKR--------- 166 (239)
Q Consensus 116 ~hp~gE~alArAA~~~gi~~~lSs~ss--------~s--leeia~~-------~--~-~~~wfQLy~~~dr--------- 166 (239)
.|++-=.++.++|++.+.|.++....+ ++ ++++... . | .+-++.|=...+-
T Consensus 22 ~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~ 101 (420)
T 2fiq_A 22 AHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDA 101 (420)
T ss_dssp CCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhh
Confidence 466677899999999999998864221 12 4444221 1 2 1234444333332
Q ss_pred --HHHHHHHHHHHHcCCcEEEEeecC
Q 026410 167 --DIAATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 167 --~~~~~li~rAe~aG~~AlvvTVD~ 190 (239)
+..++++++|.++||+-|+++--.
T Consensus 102 am~~a~e~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 102 AMEKSVELVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred hhhhHHHHHHHHHHhCCCEEEECCCC
Confidence 344599999999999998887553
No 130
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=26.19 E-value=34 Score=28.15 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
..+.+.+++.+++|+++|++..++...+ ...+|..+.+|
T Consensus 61 ~~l~~~~~~l~~~g~d~iviaCnTa~~~--~~~l~~~~~iP 99 (228)
T 1jfl_A 61 PQLIWTAKRLEECGADFIIMPCNTAHAF--VEDIRKAIKIP 99 (228)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTGGGGG--HHHHHHHCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccHHHH--HHHHHHhCCCC
Confidence 4566788888999999999999988633 56777777777
No 131
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=26.04 E-value=1.2e+02 Score=26.90 Aligned_cols=87 Identities=11% Similarity=0.149 Sum_probs=52.9
Q ss_pred cCcceEeccccchhccCcHHHHHHHHHHhhcCCc---eeecCCCCCcHHHHHhhcC--CceeEEEEeecCHHHHHHHHHH
Q 026410 101 ISAPIIIAPTALHKLANPEGEVATARAAASCNTI---MVLSFTSSSSIEEVAASCN--AVRFYQLYVFKKRDIAATLVQR 175 (239)
Q Consensus 101 ~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~---~~lSs~ss~sleeia~~~~--~~~wfQLy~~~dr~~~~~li~r 175 (239)
+..||.|.=+ .+++-+..++++|-++|.- ++-| .+....+++.+.+. +.... +-.++|-+..++++++
T Consensus 121 ~~vplsI~DT-----~~~~~~~~V~eaal~aga~~k~iINd-vs~~~~~~~~~~aa~~g~~vv-~m~~~dv~~l~~~~~~ 193 (310)
T 2h9a_B 121 IDVPLMIIGC-----GVEEKDAEIFPVIGEALSGRNCLLSS-ATKDNYKPIVATCMVHGHSVV-ASAPLDINLSKQLNIM 193 (310)
T ss_dssp CSSCEEEECC-----SCHHHHHHHHHHHHHHTTTSCCEEEE-ECTTTHHHHHHHHHHHTCEEE-EECSSCHHHHHHHHHH
T ss_pred CCceEEEECC-----CCCCCCHHHHHHHHHhCCCCCCEEEE-CCCCccHHHHHHHHHhCCCEE-EEChhHHHHHHHHHHH
Confidence 3567776222 3677788888888888763 4433 22224566654331 22111 1223477888999999
Q ss_pred HHHcCC--cEEEEeecCCCCC
Q 026410 176 AERNGF--KALVLTADTPRLG 194 (239)
Q Consensus 176 Ae~aG~--~AlvvTVD~p~~g 194 (239)
|+++|. +-|+++-=.-..|
T Consensus 194 a~~~Gi~~e~IilDPg~g~~g 214 (310)
T 2h9a_B 194 IMEMNLAPNRIIMDPLIGALG 214 (310)
T ss_dssp HHTTTCCGGGEEEECCCCCTT
T ss_pred HHHCCCChhhEEEeCCCcccc
Confidence 999999 5788875543344
No 132
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=25.87 E-value=71 Score=22.44 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeec--CCCCCCchhHhhcCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTAD--TPRLGRREADIKNKMI 205 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD--~p~~g~Re~d~r~~f~ 205 (239)
.+...+++.|++.|++.+.++++ ..-..-+.=-.+.||.
T Consensus 100 ~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~ 140 (150)
T 3t9y_A 100 RLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYV 140 (150)
T ss_dssp HHHHHHHHHHHHTTCSCEEECCCCCC------------CCC
T ss_pred HHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCE
Confidence 44556666777889999999998 4443334434566664
No 133
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=25.75 E-value=1.2e+02 Score=26.65 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhh
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss~sleeia~~ 151 (239)
.+|=..+.+.+++.|+++...-+...+++.+.+.
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~ 110 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI 110 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh
Confidence 4566789999999999999888877777766443
No 134
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=25.50 E-value=1e+02 Score=28.31 Aligned_cols=40 Identities=15% Similarity=0.316 Sum_probs=28.5
Q ss_pred Hhccccccccccc-CCCCCCcceeec-CcccCcceEeccccc
Q 026410 73 AFHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTAL 112 (239)
Q Consensus 73 af~ri~l~PRvL~-dv~~~Dtst~ll-G~~~s~Pi~iaP~g~ 112 (239)
.|+.|.|.|..-. +-.++|++++|. +..+..|++.+|+..
T Consensus 18 ~~~dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~ 59 (494)
T 1vrd_A 18 TFDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDT 59 (494)
T ss_dssp CGGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTT
T ss_pred ccccEEeccccccCCCCceEEEehhhCCCccCceeEecchHH
Confidence 3788888865432 334678888886 567888999999754
No 135
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=25.39 E-value=63 Score=23.26 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~ 205 (239)
.++..+++.|.+.|++.|.++|+..-..-+.=-.|.||.
T Consensus 108 ~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~ 146 (166)
T 3jvn_A 108 QLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLN 146 (166)
T ss_dssp HHHHHHHHHHHTTTCSEEEECCC--CCBC----------
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCe
Confidence 445566666777899999999976554444445567774
No 136
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=24.88 E-value=1.7e+02 Score=25.64 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 026410 167 DIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvT 187 (239)
+...+.+++|+++|.+-|+++
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEc
Confidence 456788999999999977777
No 137
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=24.86 E-value=1.5e+02 Score=26.09 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHcCCc--EEEEee
Q 026410 167 DIAATLVQRAERNGFK--ALVLTA 188 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~--AlvvTV 188 (239)
+..++++++|+++|.+ -|+++-
T Consensus 182 ~~l~~~i~~a~~~GI~~~~IilDP 205 (297)
T 1tx2_A 182 ADLYDSIKIAKDAGVRDENIILDP 205 (297)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHcCCChhcEEEeC
Confidence 5567889999999998 788873
No 138
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=24.38 E-value=84 Score=26.27 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=38.4
Q ss_pred ccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHHhhcCCceeEE----------EEeecCHHHHHHHHHHHHHcCCcEE
Q 026410 115 LANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQ----------LYVFKKRDIAATLVQRAERNGFKAL 184 (239)
Q Consensus 115 l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia~~~~~~~wfQ----------Ly~~~dr~~~~~li~rAe~aG~~Al 184 (239)
|.++.--..+|+++.+.|...+ +..+..-+++|++...-+- +- +|+.. ..+.++.+.++|++.+
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i-~~~~~~~i~~ir~~v~~Pv-ig~~k~d~~~~~~~I~~----~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAV-RIEGIDNLRMTRSLVSVPI-IGIIKRDLDESPVRITP----FLDDVDALAQAGAAII 105 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEE-EEESHHHHHHHHTTCCSCE-EEECBCCCSSCCCCBSC----SHHHHHHHHHHTCSEE
T ss_pred CCCcchHHHHHHHHHHCCCeEE-EECCHHHHHHHHHhcCCCE-EEEEeecCCCcceEeCc----cHHHHHHHHHcCCCEE
Confidence 3344445799999999999854 3333223344444443221 11 11111 2345778889999977
Q ss_pred EEee
Q 026410 185 VLTA 188 (239)
Q Consensus 185 vvTV 188 (239)
++..
T Consensus 106 ~l~~ 109 (232)
T 3igs_A 106 AVDG 109 (232)
T ss_dssp EEEC
T ss_pred EECc
Confidence 6543
No 139
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=24.29 E-value=2.5e+02 Score=23.94 Aligned_cols=67 Identities=6% Similarity=0.002 Sum_probs=35.1
Q ss_pred HHHHHHHHhhcCCce--eecCCCC----CcHHHHHhhc--CCceeEEEEee-----cCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 121 EVATARAAASCNTIM--VLSFTSS----SSIEEVAASC--NAVRFYQLYVF-----KKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 121 E~alArAA~~~gi~~--~lSs~ss----~sleeia~~~--~~~~wfQLy~~-----~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
+.-+++.+++..-.+ .++...- ..++|+.... .+..-+.++.. -+......+.+++++.|.. ++++
T Consensus 83 N~~l~~~~~~~p~rf~g~~a~vp~~~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~p-v~iH 161 (312)
T 3ij6_A 83 NEELSNLVDQHPGKFAGAVAILPMNNIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVP-LWMH 161 (312)
T ss_dssp HHHHHHHHHHCTTTEEEEEEECCTTCHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCC-EEEE
T ss_pred HHHHHHHHHhCCCceeeeEEecCccCHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCe-EEEc
Confidence 344566666653322 3554432 2345565442 23333444432 1334567888888888886 4455
Q ss_pred e
Q 026410 188 A 188 (239)
Q Consensus 188 V 188 (239)
.
T Consensus 162 ~ 162 (312)
T 3ij6_A 162 P 162 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 140
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=24.24 E-value=2.1e+02 Score=24.51 Aligned_cols=56 Identities=13% Similarity=0.117 Sum_probs=43.2
Q ss_pred cCCceeecCCCCCcHHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q 026410 131 CNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 131 ~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (239)
-|+...+......+++++.+. +.+ +.=|.-..|+.-+-.++|-|+..|+++++++=
T Consensus 97 qGv~a~~~~~~~~~l~~~~~~-~~~-~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~ 152 (277)
T 3nk6_A 97 AKVFGIARVPRPARLADIAER-GGD-VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVD 152 (277)
T ss_dssp CCEEEEEECCCCCCHHHHHHH-CSC-EEEEESCCCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred CeEEEEEecCCCCCHHHHhcc-CCC-EEEEEcCCCcchHHHHHHHHHHcCCCEEEEcC
Confidence 567767765545678888643 233 66666678999999999999999999999976
No 141
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=23.79 E-value=1.1e+02 Score=24.76 Aligned_cols=25 Identities=8% Similarity=-0.007 Sum_probs=18.8
Q ss_pred ecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 163 FKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 163 ~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
....+..++.++.|++.|++.|++.
T Consensus 87 ~~~~~~~~~~i~~A~~lGa~~v~~~ 111 (262)
T 3p6l_A 87 AEKSSDWEKMFKFAKAMDLEFITCE 111 (262)
T ss_dssp CSSTTHHHHHHHHHHHTTCSEEEEC
T ss_pred CccHHHHHHHHHHHHHcCCCEEEec
Confidence 3456667788888888888888876
No 142
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=23.37 E-value=69 Score=27.24 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=39.9
Q ss_pred HHHHHHHHhhcCC---------ceeecCCCCCcHHHHHhhcCCceeEEEEeec-----------------------CHHH
Q 026410 121 EVATARAAASCNT---------IMVLSFTSSSSIEEVAASCNAVRFYQLYVFK-----------------------KRDI 168 (239)
Q Consensus 121 E~alArAA~~~gi---------~~~lSs~ss~sleeia~~~~~~~wfQLy~~~-----------------------dr~~ 168 (239)
+..+++.-++.|. ..+++|+....++.+.+..|.....+|+... -..+
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 229 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDL 229 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGC
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHhhc
Confidence 3455555555554 3667777766677776655543333333211 1112
Q ss_pred HHHHHHHHHHcCCcEEEEeecC
Q 026410 169 AATLVQRAERNGFKALVLTADT 190 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~ 190 (239)
..++++++.++|.+..+-|||.
T Consensus 230 ~~~~v~~~~~~G~~v~~wTvn~ 251 (287)
T 2oog_A 230 TEQNTHHLKDLGFIVHPYTVNE 251 (287)
T ss_dssp CHHHHHHHHHTTCEECCBCCCS
T ss_pred CHHHHHHHHHCCCeEEEEeCCC
Confidence 3566777777777777777765
No 143
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=23.08 E-value=82 Score=22.61 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKM 204 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f 204 (239)
.+...+++.|++.|++.|.++|+..-..-+.=-.|.||
T Consensus 105 ~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF 142 (153)
T 1z4e_A 105 QLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGF 142 (153)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCC
Confidence 34455666777789999999987643322222345566
No 144
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=23.02 E-value=58 Score=28.70 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhhcCCceeecCCC----C-CcHHH-------HHh--hcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEE
Q 026410 119 EGEVATARAAASCNTIMVLSFTS----S-SSIEE-------VAA--SCNAVRFYQLYVFKKRDIAATLVQRAERNGFKAL 184 (239)
Q Consensus 119 ~gE~alArAA~~~gi~~~lSs~s----s-~slee-------ia~--~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Al 184 (239)
+.=.++.+||++.+.|.++.... - .+++. +++ ...-+-.++| |.....+.+.+|.++||.-+
T Consensus 32 e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSV 107 (288)
T 3q94_A 32 EWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHL----DHGSSFEKCKEAIDAGFTSV 107 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEE----EEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEEC----CCCCCHHHHHHHHHcCCCeE
Confidence 44467888888888888875311 0 12222 222 1222334444 44444567778888888887
Q ss_pred EEee
Q 026410 185 VLTA 188 (239)
Q Consensus 185 vvTV 188 (239)
+++-
T Consensus 108 MiDg 111 (288)
T 3q94_A 108 MIDA 111 (288)
T ss_dssp EECC
T ss_pred EEeC
Confidence 7643
No 145
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=22.96 E-value=1.1e+02 Score=26.84 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=24.0
Q ss_pred HHHHHHHHHH---HcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 168 IAATLVQRAE---RNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 168 ~~~~li~rAe---~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
...++|+||+ +||+.+|++-. .| ..=-+.+...+.+|
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~-vp--~~~a~~it~~l~iP 216 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM-VP--AELATQITGKLTIP 216 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES-CC--HHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec-CC--HHHHHHHHHhCCCC
Confidence 4578888884 79999999966 12 12233444556677
No 146
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=22.82 E-value=81 Score=26.37 Aligned_cols=66 Identities=21% Similarity=0.207 Sum_probs=38.3
Q ss_pred ccCcHHHHHHHHHHhhcCCceeecCCCCCcHHHHH---hhcCCce---eEE------EEeecCHHHHHHHHHHHHHcCCc
Q 026410 115 LANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA---ASCNAVR---FYQ------LYVFKKRDIAATLVQRAERNGFK 182 (239)
Q Consensus 115 l~hp~gE~alArAA~~~gi~~~lSs~ss~sleeia---~~~~~~~---wfQ------Ly~~~dr~~~~~li~rAe~aG~~ 182 (239)
|.+++--..+|+++.+.|...+.. .++++|. +..+-+- |-+ +|+.. +.+.++.+.++|++
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~----~~~~i~~~~~aGad 103 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP----YLQDVDALAQAGAD 103 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC----SHHHHHHHHHHTCS
T ss_pred CCCcchHHHHHHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc----cHHHHHHHHHcCCC
Confidence 434445579999999999887543 2355554 4433221 112 12111 23457788899999
Q ss_pred EEEEee
Q 026410 183 ALVLTA 188 (239)
Q Consensus 183 AlvvTV 188 (239)
.+++..
T Consensus 104 ~I~l~~ 109 (229)
T 3q58_A 104 IIAFDA 109 (229)
T ss_dssp EEEEEC
T ss_pred EEEECc
Confidence 776543
No 147
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=22.74 E-value=1.9e+02 Score=24.90 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=24.0
Q ss_pred ecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 026410 163 FKKRDIAATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 163 ~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
+.......++|++|.+.|.+..+-||+++-
T Consensus 211 ~~~~~~~~~~V~~ah~~G~~V~vWTv~t~d 240 (292)
T 3mz2_A 211 PKITPEVREVIDMLHERGVMCMISTAPSDD 240 (292)
T ss_dssp SSCCHHHHHHHHHHHHTTBCEEEECTTTGG
T ss_pred ccccccCHHHHHHHHHCCCEEEEEeCCCcc
Confidence 334456689999999999999999987653
No 148
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=22.71 E-value=2e+02 Score=23.92 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=41.2
Q ss_pred eecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCC---ceeecCC-----CCCcHHHHHhhcC--CceeEEEEee-
Q 026410 95 TILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNT---IMVLSFT-----SSSSIEEVAASCN--AVRFYQLYVF- 163 (239)
Q Consensus 95 ~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi---~~~lSs~-----ss~sleeia~~~~--~~~wfQLy~~- 163 (239)
.--|...+.++.++......- .+-+ ...+.++++|. -+..... ....++++++... +....-+..+
T Consensus 15 ~~~~~~~~~klgi~~~~~~~~--~~~~-~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~ 91 (296)
T 2g0w_A 15 NANGNLKKCPITISSYTLGTE--VSFP-KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYIT 91 (296)
T ss_dssp -------CCCEEECGGGGTTT--SCHH-HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBC
T ss_pred cCCCCcCCCCceeechhcCCC--CCHH-HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhh
Confidence 345677777888887655431 1122 23333344443 3332211 2345666654431 3222222211
Q ss_pred ----cC------HHHHHHHHHHHHHcCCcEEEE
Q 026410 164 ----KK------RDIAATLVQRAERNGFKALVL 186 (239)
Q Consensus 164 ----~d------r~~~~~li~rAe~aG~~Alvv 186 (239)
.+ .+..++.++.|++.|++.|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 92 QWGTAEDRTAEQQKKEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp CCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 11 134578889999999999877
No 149
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=22.47 E-value=2e+02 Score=25.21 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEe
Q 026410 166 RDIAATLVQRAERNGFK--ALVLT 187 (239)
Q Consensus 166 r~~~~~li~rAe~aG~~--AlvvT 187 (239)
.+...+.+++|+++|.+ -|+++
T Consensus 170 ~~~l~~~i~~a~~~Gi~~~~IilD 193 (294)
T 2y5s_A 170 RDFLAARAQALRDAGVAAERICVD 193 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45567889999999998 78888
No 150
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=21.93 E-value=71 Score=28.65 Aligned_cols=67 Identities=15% Similarity=0.116 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHhhcCCceeecCCCC----CcHHH-------HHhh-cCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEE
Q 026410 118 PEGEVATARAAASCNTIMVLSFTSS----SSIEE-------VAAS-CNAVRFYQLYVFKKRDIAATLVQRAERNGFKALV 185 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~ss----~slee-------ia~~-~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alv 185 (239)
.+.=.++.+||++.+.|.++..... .+.+. .++. ..-+-.++| |.....+++++|.++||.-++
T Consensus 28 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVM 103 (323)
T 2isw_A 28 MEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHL----DHGDTLESVKMAIDLGFSSVM 103 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEE----EEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEE
Confidence 3444678888888888887754211 11111 1111 112333344 444445667778888888776
Q ss_pred Eee
Q 026410 186 LTA 188 (239)
Q Consensus 186 vTV 188 (239)
++-
T Consensus 104 iDg 106 (323)
T 2isw_A 104 IDA 106 (323)
T ss_dssp ECC
T ss_pred ecC
Confidence 653
No 151
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=21.71 E-value=1.4e+02 Score=26.33 Aligned_cols=60 Identities=10% Similarity=0.118 Sum_probs=44.6
Q ss_pred HhhcCCceeecCCCCCcHHHHHhhcCC------------ceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 128 AASCNTIMVLSFTSSSSIEEVAASCNA------------VRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 128 A~~~gi~~~lSs~ss~sleeia~~~~~------------~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
-.+.+-.++.=......++++.+..|+ ..|+.+...-++....+++.+.+++|+++|+++
T Consensus 211 ~~A~~~~~~~~n~p~~~l~~v~~~lPg~~~PTV~~l~~~~~w~aV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 282 (289)
T 2vd3_A 211 IDAEGKRLVMLNIDRKNLDRVRALMPGMTGPTVSEVLSDNGVVAVHAVVDEKEVFNLINRLKAVGARDILVV 282 (289)
T ss_dssp HHTTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECCSSSCEEEEEEEEETTTHHHHHHHHHTTTCEEEEEE
T ss_pred HHhccEEEEEEeCCHHHHHHHHHhcccCCCCceecccCCCCEEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 344455555555566788998877531 258777777778888999999999999999886
No 152
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=21.61 E-value=1.1e+02 Score=22.13 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~ 205 (239)
.+...+++.|.+.|++.|.++++..- .-+.--.|.||.
T Consensus 111 ~ll~~~~~~~~~~g~~~i~l~~~~~n-~a~~~y~k~GF~ 148 (158)
T 1vkc_A 111 ALLRKAEEWAKERGAKKIVLRVEIDN-PAVKWYEERGYK 148 (158)
T ss_dssp HHHHHHHHHHHHTTCSCEEECCCTTC-THHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEeCCC-cHHHHHHHCCCE
Confidence 44456666777789999999988755 444445667774
No 153
>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens}
Probab=21.36 E-value=1.5e+02 Score=23.75 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=46.0
Q ss_pred chhccCcHHHHHHHHHHhhcCCceee-cCCCCCcHHHHHh-hcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q 026410 112 LHKLANPEGEVATARAAASCNTIMVL-SFTSSSSIEEVAA-SCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTAD 189 (239)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~gi~~~l-Ss~ss~sleeia~-~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD 189 (239)
..++-+|.-=-+++|.|..+|+-.++ +.....+.+.+.. +.+...|+.++..+ .+-..+.++..++.|+..+..+.+
T Consensus 31 Ld~i~dp~NlGaI~Rta~a~G~~~vil~~~~~~~~k~~~r~s~ga~~~l~~~~~~-~~~~~~~l~~lk~~g~~i~~~~~~ 109 (184)
T 2ha8_A 31 ASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSAEQWLPLVEVK-PPQLIDYLQQKKTEGYTIIGVEQT 109 (184)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSEEEESCGGGGGSHHHHHHHTTGGGTSCEEECC-GGGHHHHHHHHHHTTCEEEEECCC
T ss_pred EcCCCCCCcHHHHHHHHHHhCCCEEEECCCCCCCcccceeecCCccceEEEEEEc-CCCHHHHHHHHHHCCCEEEEEECC
Confidence 34555663335889999999997554 3322233345533 33555666665431 122356677788889987777654
No 154
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=21.28 E-value=83 Score=28.05 Aligned_cols=67 Identities=18% Similarity=0.239 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHhhcCCceeecCCC------CCc----HHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHc--------
Q 026410 118 PEGEVATARAAASCNTIMVLSFTS------SSS----IEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERN-------- 179 (239)
Q Consensus 118 p~gE~alArAA~~~gi~~~lSs~s------s~s----leeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~a-------- 179 (239)
.+.=.++.+||++.+.|.++.... ... +.++++...-+-.+.| |.....+++++|.++
T Consensus 37 ~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHl----DHg~~~e~i~~ai~~~~~~~~~~ 112 (306)
T 3pm6_A 37 LEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHL----DHAQDPEIIKRAADLSRSETHEP 112 (306)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEE----EEECCHHHHHHHHHTC------C
T ss_pred HHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEc----CCCCCHHHHHHHHHhhhhccCCC
Confidence 344467788888888888775321 111 1122222222333333 444344567777777
Q ss_pred CCcEEEEee
Q 026410 180 GFKALVLTA 188 (239)
Q Consensus 180 G~~AlvvTV 188 (239)
||.-++++-
T Consensus 113 GFtSVMiDg 121 (306)
T 3pm6_A 113 GFDSIMVDM 121 (306)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEEeC
Confidence 888777643
No 155
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=21.12 E-value=1.3e+02 Score=27.49 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=37.1
Q ss_pred HHHHHHHHHhhcCCceeecCCCCCcHHHHHhhcCCceeEEEEee---------------cCHHHHHHHHHHHHHcCCcEE
Q 026410 120 GEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVF---------------KKRDIAATLVQRAERNGFKAL 184 (239)
Q Consensus 120 gE~alArAA~~~gi~~~lSs~ss~sleeia~~~~~~~wfQLy~~---------------~dr~~~~~li~rAe~aG~~Al 184 (239)
.++......++.|..+--.+.......++.+..+ ..|.-|.++ .|.+.+.++++||+++|.+.+
T Consensus 28 ~Dis~~~~~e~~G~~y~~~~G~~~d~~~ilk~~G-~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVl 106 (399)
T 1ur4_A 28 VDVSSIIALEESGVAFYNESGKKQDIFKTLKEAG-VNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLL 106 (399)
T ss_dssp EECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTT-CCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EehhhhHHHHHcCCeeeCCCCccchHHHHHHHCC-CCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 3444444556677766443333344444444433 223333221 356788899999999999866
Q ss_pred E
Q 026410 185 V 185 (239)
Q Consensus 185 v 185 (239)
+
T Consensus 107 l 107 (399)
T 1ur4_A 107 A 107 (399)
T ss_dssp E
T ss_pred E
Confidence 5
No 156
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=20.98 E-value=88 Score=22.99 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMIT 206 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f~~ 206 (239)
.++..+++.|.+.|++.+.++|+..-..-+.=-.+.||..
T Consensus 120 ~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 159 (176)
T 3fyn_A 120 AALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFEE 159 (176)
T ss_dssp HHHHHHHHHHHHTTCCCEECCCC--------HHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCee
Confidence 4556667777788999999999876545555566788853
No 157
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.94 E-value=65 Score=27.90 Aligned_cols=23 Identities=9% Similarity=0.138 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe
Q 026410 165 KRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 165 dr~~~~~li~rAe~aG~~AlvvT 187 (239)
|-+-..++++-+.++|++-++=|
T Consensus 197 dl~N~~~I~~i~l~aGv~~viPH 219 (249)
T 3m0z_A 197 DLENYSEILKIALDAGVSKIIPH 219 (249)
T ss_dssp CTTTHHHHHHHHHHHTCSCBCCB
T ss_pred cHhhHHHHHHHHHHcCCCeeccc
Confidence 33444555555555555554443
No 158
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=20.52 E-value=79 Score=23.13 Aligned_cols=38 Identities=5% Similarity=-0.112 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCC
Q 026410 167 DIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKM 204 (239)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~g~Re~d~r~~f 204 (239)
.+...+++.|++.|++.|.++++..-..-+.=-.|.||
T Consensus 115 ~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF 152 (166)
T 4evy_A 115 MLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGF 152 (166)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCC
Confidence 34456666677789999999988753323333345565
No 159
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=20.50 E-value=3e+02 Score=23.75 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=26.4
Q ss_pred cCHHHHHHHHHHHH---HcCCcEEEEeecCCCCCCchhHhhcCCCCC
Q 026410 164 KKRDIAATLVQRAE---RNGFKALVLTADTPRLGRREADIKNKMITP 207 (239)
Q Consensus 164 ~dr~~~~~li~rAe---~aG~~AlvvTVD~p~~g~Re~d~r~~f~~p 207 (239)
++.+...++++||+ +||+.+|++-. .| ..=-+.+...+.+|
T Consensus 155 rt~~~a~~~i~rA~a~~eAGA~~ivlE~-vp--~~~a~~it~~l~iP 198 (264)
T 1m3u_A 155 RGDEAGDQLLSDALALEAAGAQLLVLEC-VP--VELAKRITEALAIP 198 (264)
T ss_dssp CSHHHHHHHHHHHHHHHHHTCCEEEEES-CC--HHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHHHHCCCcEEEEec-CC--HHHHHHHHHhCCCC
Confidence 45555688888884 79999999976 12 12223444556667
No 160
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=20.44 E-value=98 Score=28.11 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=51.2
Q ss_pred cHHHHHHHhcccccccccccCCCCCCcceeecCcccCcceEeccccchhccCcHHHHHHHHHHhhcCCce-------eec
Q 026410 66 TLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIM-------VLS 138 (239)
Q Consensus 66 T~~~N~~af~ri~l~PRvL~dv~~~Dtst~llG~~~s~Pi~iaP~g~~~l~hp~gE~alArAA~~~gi~~-------~lS 138 (239)
.+.+-.+.+-++-|.|=+=+..++.+-=-|+|.++--+ ..|||+|-.. .- .+.+.-++.||-+ ++|
T Consensus 141 ~~~~~L~~~G~~PLPPYI~r~~~D~erYQTVyAk~~Gs--vAAPTAGLHF---t~--eLl~~L~~kGv~~a~vTLHVG~G 213 (346)
T 1yy3_A 141 IFYEVLESLGEMPLPPYIKEQLDDKERYQTVYSKEIGS--AAAPTAGLHF---TE--EILQQLKDKGVQIEFITLHVGLG 213 (346)
T ss_dssp CHHHHHHHHHTCCCCHHHHTTSSSCC--------------CCCCSSTTCC---CH--HHHHHHHHHTEEEEECEEESGGG
T ss_pred cHHHHHHHCCCCCCCcccCCCCCChhhchhhhcCCCCh--hhcCCCCCCC---CH--HHHHHHHHCCCeEEEEEEeecCC
Confidence 34555566666665554333333333333456554322 4578876543 22 2333344444432 345
Q ss_pred CCCCCcHHHHHhhcCCceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 139 FTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 139 s~ss~sleeia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
|+.....|+|.++..-.-|+++ .+.+.+.|.+|++.|=+.|.|.
T Consensus 214 TF~PV~~e~i~~H~MHsE~~~V-----~~~ta~~in~aka~G~RViAVG 257 (346)
T 1yy3_A 214 TFRPVSADEVEEHNMHAEFYQM-----SEETAAALNKVRENGGRIISVG 257 (346)
T ss_dssp GGC-----------CCCEEEEE-----CHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCccccccccCCcccEEEEE-----CHHHHHHHHHHHHcCCeEEEEe
Confidence 5665666888887655568877 3567889999999999887774
No 161
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=20.33 E-value=75 Score=27.86 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=12.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEee
Q 026410 165 KRDIAATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 165 dr~~~~~li~rAe~aG~~AlvvTV 188 (239)
|-+-..++++-|.++|++-++=+|
T Consensus 220 dl~Nf~~I~~i~l~aGv~~viPHI 243 (275)
T 3m6y_A 220 DKENFETIVRIALEANVEQVIPHV 243 (275)
T ss_dssp CTTTHHHHHHHHHHTTCSCBCCEE
T ss_pred cHhHHHHHHHHHHHcCCCeecccc
Confidence 444445555666666665555443
No 162
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=20.28 E-value=1.4e+02 Score=26.77 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=24.2
Q ss_pred ceeEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q 026410 155 VRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (239)
Q Consensus 155 ~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (239)
+.+.=+-+.-+.+.+.++.+.++++|+++|++|
T Consensus 222 Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 222 AVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 334444333456677899999999999999987
No 163
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=20.08 E-value=4.3e+02 Score=24.72 Aligned_cols=77 Identities=16% Similarity=0.076 Sum_probs=47.4
Q ss_pred cCcHHHHHHHHHHhhcCCceeecCCCC----------CcHHHH-------Hhhc--C-CceeEEEEeecC----------
Q 026410 116 ANPEGEVATARAAASCNTIMVLSFTSS----------SSIEEV-------AASC--N-AVRFYQLYVFKK---------- 165 (239)
Q Consensus 116 ~hp~gE~alArAA~~~gi~~~lSs~ss----------~sleei-------a~~~--~-~~~wfQLy~~~d---------- 165 (239)
.|++-=.++.++|++.+.|.++-...+ ...+++ ++.. | .+-++++=-..+
T Consensus 29 ~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w~~~~~~~ 108 (450)
T 3txv_A 29 AHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPWKHLPADE 108 (450)
T ss_dssp CCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGGTTSCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcccccccHHH
Confidence 577777899999999999998753221 112333 2222 2 122444422221
Q ss_pred -HHHHHHHHHHHHHcCCcEEEEeecCCC
Q 026410 166 -RDIAATLVQRAERNGFKALVLTADTPR 192 (239)
Q Consensus 166 -r~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (239)
.+...+++++|.++||+-|+++--...
T Consensus 109 am~~a~e~i~~aI~AGFtSVMiD~S~~p 136 (450)
T 3txv_A 109 AMAKAEAMITAYAKAGFTKLHLDTSMGC 136 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEECCCBCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCCc
Confidence 123479999999999999887655433
No 164
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=20.07 E-value=73 Score=26.47 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026410 169 AATLVQRAERNGFKALVLTA 188 (239)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (239)
.++++++|++.|++.|++|=
T Consensus 37 ~ee~v~~A~~~Gl~~i~iTD 56 (255)
T 2anu_A 37 LGEVVDLFGKHGVDVVSITD 56 (255)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEcC
Confidence 46799999999999999983
No 165
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=20.07 E-value=53 Score=27.21 Aligned_cols=27 Identities=22% Similarity=0.407 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCC
Q 026410 165 KRDIAATLVQRAERNGFKALVLTADTP 191 (239)
Q Consensus 165 dr~~~~~li~rAe~aG~~AlvvTVD~p 191 (239)
+.+.+.+++++|.+.|.+.|++|==.+
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~ 48 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRR 48 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEB
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 345667899999999999999975433
Done!