BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026413
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHE5|TO401_ARATH Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis
thaliana GN=TOM40-1 PE=1 SV=3
Length = 309
Score = 327 bits (838), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/213 (72%), Positives = 175/213 (82%), Gaps = 4/213 (1%)
Query: 1 MAGLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDF 60
MA L+PP T + DA T K +EKVDY NLP P+PYEE+HREALMSLK + FEGLRFDF
Sbjct: 1 MADLLPPLTAAQVDAKT---KVDEKVDYSNLPSPVPYEELHREALMSLKSDNFEGLRFDF 57
Query: 61 TKGLNQKFSLSHSVIMGPTEIPSQSTET-IKIPTAHYEFGANYIDPKLMLIGRVLTDGRL 119
T+ LNQKFSLSHSV+MGPTE+P+QS ET IKIPTAHYEFGANY DPKL+LIGRV+TDGRL
Sbjct: 58 TRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVMTDGRL 117
Query: 120 NARVKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNV 179
NAR+K DL+D L +KANA +TNE HMS M NFDY G DYR Q Q G AL GA+YIQ+V
Sbjct: 118 NARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQSALIGATYIQSV 177
Query: 180 SPHLSLGGEVFWAGQHRKSGIGYAARYENDKMV 212
+ HLSLGGE+FWAG RKSGIGYAARYE DKMV
Sbjct: 178 TNHLSLGGEIFWAGVPRKSGIGYAARYETDKMV 210
>sp|Q9SX55|TO402_ARATH Probable mitochondrial import receptor subunit TOM40-2
OS=Arabidopsis thaliana GN=TOM40-2 PE=2 SV=3
Length = 310
Score = 289 bits (739), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 1 MAGLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDF 60
M G PP T + DA T K +EKVDY NLPCP+ YEE++REA M+LKPELFEG R D+
Sbjct: 1 MEGFSPPINTAQVDAKT---KLDEKVDYSNLPCPVLYEELNREATMALKPELFEGFRLDY 57
Query: 61 TKGLNQKFSLSHSVIMGPTEIP--SQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGR 118
K LNQKF LSHS++MGPTE+P + S+E IKIPTA+Y+FGA +IDPKL LIGR+ TDGR
Sbjct: 58 NKSLNQKFFLSHSILMGPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLYLIGRITTDGR 117
Query: 119 LNARVKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQN 178
LNAR K DL+DN S+KANA LT+E S G + DYKG DYRTQ Q GN +++ A+YIQ+
Sbjct: 118 LNARAKFDLTDNFSVKANALLTDEEDKSQGHLVIDYKGSDYRTQLQLGNNSVYAANYIQH 177
Query: 179 VSPHLSLGGEVFWAGQHRKSGIGYAARYENDKMV 212
V+PHLSLGGE FW GQ SG+GYAARYE DK V
Sbjct: 178 VTPHLSLGGEAFWLGQQLMSGVGYAARYETDKTV 211
>sp|Q6P825|TOM40_XENTR Mitochondrial import receptor subunit TOM40 homolog OS=Xenopus
tropicalis GN=tomm40 PE=2 SV=1
Length = 336
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 5 VPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGL 64
VPPG T+ P A ++++ LP P +EE HR+ L P EG++ KGL
Sbjct: 26 VPPGFTMPPVAGLTPTPDKKETQEDRLPNPGTFEECHRKC-KELFPIQMEGVKLTVNKGL 84
Query: 65 NQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLM--------LIGRVLTD 116
+ F ++H+V + I ++Y FGA Y+ K + L+G +
Sbjct: 85 SNYFQVNHTVSLS------------MIGESNYHFGATYVGTKQLGPAEAFPVLVGDLDNS 132
Query: 117 GRLNARVKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGN------GAL 170
G LNA++ ++ N+ K Q T + + ++ +Y+G+D+ GN +
Sbjct: 133 GSLNAQIIHQVTSNVRSKIALQ-TQQSKFVNWQLDTEYRGEDFTAAVTLGNPDILVGSGI 191
Query: 171 FGASYIQNVSPHLSLGGEVFWAGQHRKSG-----IGYAARY 206
A Y+Q+++P L+LGGE+ + HR+ G + A RY
Sbjct: 192 LVAHYLQSITPSLALGGELVY---HRRPGEEGTVMSLAGRY 229
>sp|Q7ZTM6|TOM40_XENLA Mitochondrial import receptor subunit TOM40 homolog OS=Xenopus
laevis GN=tomm40 PE=2 SV=1
Length = 336
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 36/221 (16%)
Query: 5 VPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGL 64
VPPG T+ P A ++++ LP P +EE HR+ L P EG++ KGL
Sbjct: 26 VPPGFTMPPVAGLTPTPDKKEPQEERLPNPGTFEECHRKC-KELFPIQMEGVKLIVNKGL 84
Query: 65 NQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLM--------LIGRVLTD 116
+ F ++H++ S ST I ++Y FGA Y+ K + L+G
Sbjct: 85 SNYFQVNHTI--------SLST----IGESNYHFGATYVGTKQLGPAEAFPVLVGDFDNS 132
Query: 117 GRLNARVKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGN------GAL 170
G LN ++ +++N+ K Q T + + ++ +Y+G+DY GN +
Sbjct: 133 GSLNGQIIHQVTNNIRSKIALQ-TQQSKFVNWQLDTEYRGEDYTASVTLGNPDILVGSGI 191
Query: 171 FGASYIQNVSPHLSLGGEVFWAGQHRKSG-----IGYAARY 206
A Y+Q+++P L+LGGE+ + HR+ G + A RY
Sbjct: 192 LVAHYLQSITPSLALGGELVY---HRRPGEEGTVMSLAGRY 229
>sp|Q9QYA2|TOM40_MOUSE Mitochondrial import receptor subunit TOM40 homolog OS=Mus musculus
GN=Tomm40 PE=1 SV=3
Length = 361
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
LP P +EE HR+ L P EG++ KGL+ +F ++H+V +G
Sbjct: 77 LPNPGTFEECHRKC-KELFPVQMEGVKLTVNKGLSNRFQVTHTVALG------------T 123
Query: 91 IPTAHYEFGANYIDPKLM--------LIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNE 142
I ++Y FG Y+ K + L+G + G LNA+V LS L K Q T +
Sbjct: 124 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQ-TQQ 182
Query: 143 PHMSHGMINFDYKGKDYRTQFQFGN------GALFGASYIQNVSPHLSLGGEVFWAGQHR 196
+ ++ +Y+G D+ GN + A Y+Q+++P L+LGGE+ + HR
Sbjct: 183 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 239
Query: 197 KSG 199
+ G
Sbjct: 240 RPG 242
>sp|Q75Q40|TOM40_RAT Mitochondrial import receptor subunit TOM40 homolog OS=Rattus
norvegicus GN=Tomm40 PE=1 SV=1
Length = 361
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
LP P +EE HR+ L P EG++ KGL+ +F ++H+V +G
Sbjct: 77 LPNPGTFEECHRKC-KELFPVQMEGVKLTVNKGLSNRFQVTHTVALG------------T 123
Query: 91 IPTAHYEFGANYIDPKLM--------LIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNE 142
I ++Y FG Y+ K + L+G + G LNA+V LS L K Q T +
Sbjct: 124 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQ-TQQ 182
Query: 143 PHMSHGMINFDYKGKDYRTQFQFGN------GALFGASYIQNVSPHLSLGGEVFWAGQHR 196
+ ++ +Y+G D+ GN + A Y+Q+++P L+LGGE+ + HR
Sbjct: 183 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 239
Query: 197 KSG 199
+ G
Sbjct: 240 RPG 242
>sp|O96008|TOM40_HUMAN Mitochondrial import receptor subunit TOM40 homolog OS=Homo sapiens
GN=TOMM40 PE=1 SV=1
Length = 361
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 31/183 (16%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
LP P +EE HR+ L P EG++ KGL+ F ++H+V +
Sbjct: 77 LPNPGTFEECHRKC-KELFPIQMEGVKLTVNKGLSNHFQVNHTVALS------------T 123
Query: 91 IPTAHYEFGANYIDPKLM--------LIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNE 142
I ++Y FG Y+ K + L+G + G LNA+V L L K Q T +
Sbjct: 124 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQ-TQQ 182
Query: 143 PHMSHGMINFDYKGKDYRTQFQFGN------GALFGASYIQNVSPHLSLGGEVFWAGQHR 196
+ ++ +Y+G D+ GN + A Y+Q+++P L+LGGE+ + HR
Sbjct: 183 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 239
Query: 197 KSG 199
+ G
Sbjct: 240 RPG 242
>sp|Q1LZB5|TOM40_BOVIN Mitochondrial import receptor subunit TOM40 homolog OS=Bos taurus
GN=TOMM40 PE=2 SV=1
Length = 361
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 31/183 (16%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
LP P +EE HR+ L P EG++ KGL+ F ++H+V +
Sbjct: 77 LPNPGTFEECHRKC-KELFPIQMEGVKLTVNKGLSNHFQVNHTVALS------------T 123
Query: 91 IPTAHYEFGANYIDPKLM--------LIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNE 142
I ++Y FG Y+ K + L+G + G LNA+V L L K Q T +
Sbjct: 124 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQ-TQQ 182
Query: 143 PHMSHGMINFDYKGKDYRTQFQFGN------GALFGASYIQNVSPHLSLGGEVFWAGQHR 196
+ ++ +Y+G D+ GN + A Y+Q+++P L+LGGE+ + HR
Sbjct: 183 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 239
Query: 197 KSG 199
+ G
Sbjct: 240 RPG 242
>sp|O13656|TOM40_SCHPO Probable mitochondrial import receptor subunit tom40
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tom40 PE=3 SV=3
Length = 344
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 87/205 (42%), Gaps = 36/205 (17%)
Query: 24 EKVDY----MNLPCPIPYEEIHREAL--MSLKPELFEGLRFDFTKGLNQK--FSLSHSVI 75
EK+D +NL P E + +E + L F G+R D TKG F++SH+
Sbjct: 16 EKIDSYKSSLNLINPGTCENLSKEVSKDILLSNYAFTGVRADVTKGFCTSPWFTVSHAFA 75
Query: 76 MGPTEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNARVKCDLSDNLSLKA 135
+G +P Y F + L L G V DG + A + C + N+ K
Sbjct: 76 LGSQVLPP------------YSFSTMFGGEPLFLRGSVDNDGAVQAMLNCTWNSNVLSKV 123
Query: 136 NAQLTNEPHMSHGMINFDYKGKDYRTQFQFGN-------GALFGASYIQNVSPHLSLGGE 188
QL+N + I D+KGKD+ F+ N ++ S +Q+V+P LSLG E
Sbjct: 124 QMQLSNGAVPNMCQIEHDHKGKDFSFSFKAMNPWYEEKLTGIYIISLLQSVTPKLSLGVE 183
Query: 189 VFWAGQHRKSGIG-------YAARY 206
W Q S IG Y RY
Sbjct: 184 ALW--QKPSSSIGPEEATLSYMTRY 206
>sp|Q9U4L6|TO401_DROME Mitochondrial import receptor subunit TOM40 homolog 1 OS=Drosophila
melanogaster GN=Tom40 PE=2 SV=2
Length = 344
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
L P EE+H++ ++ FEG + KGL+ F +SH++ M +PS
Sbjct: 57 LENPGTVEELHKKC-KDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNV-VPS------- 107
Query: 91 IPTAHYEFGANYIDPKL--------MLIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNE 142
Y FGA Y+ K +L+G + G LNA V S L K +Q+ E
Sbjct: 108 ----GYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQI-QE 162
Query: 143 PHMSHGMINFDYKGKDYRTQFQFGNGALFGAS------YIQNVSPHLSLGGEVFW 191
+ + DY+G DY N ++F S Y+Q+V+P L+LG E+ +
Sbjct: 163 SKVVASQLTTDYRGSDYTLSLTVANPSIFTNSGVVVGQYLQSVTPALALGSELAY 217
>sp|A1Z6L1|TO402_DROME Mitochondrial import receptor subunit TOM40 homolog 2 OS=Drosophila
melanogaster GN=tomboy40 PE=2 SV=1
Length = 340
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 43/207 (20%)
Query: 2 AGLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFT 61
+G VPP A KP+ L P EE+H ++ FEG +
Sbjct: 33 SGGVPPQMVEALKAEAKKPE---------LTNPGTLEELHSRC-RDIQANTFEGAKIMVN 82
Query: 62 KGLNQKFSLSHSVIM---GPTEIPSQSTETIKIPTAHYEFGANYIDPKL--------MLI 110
KGL+ F ++H++ M GP+ Y FGA Y+ K +L+
Sbjct: 83 KGLSNHFQVTHTINMNSAGPS---------------GYRFGATYVGTKQYGPTEAFPVLL 127
Query: 111 GRVLTDGRLNARVKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGAL 170
G + G LNA V L+ L K +Q + + + DY+G+DY GN
Sbjct: 128 GEIDPMGNLNANVIHQLTSRLRCKFASQF-QDSKLVGTQLTGDYRGRDYTLTLTMGNPGF 186
Query: 171 FGAS------YIQNVSPHLSLGGEVFW 191
F +S Y+Q+V+ L+LG E +
Sbjct: 187 FTSSGVFVCQYLQSVTKRLALGSEFAY 213
>sp|Q9CZR3|TM40L_MOUSE Mitochondrial import receptor subunit TOM40B OS=Mus musculus
GN=Tomm40l PE=2 SV=1
Length = 308
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 3 GLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTK 62
GL P GT + +P LP P ++E+HR + P EG++ K
Sbjct: 6 GLAPMGTLPRRSHRREEP----------LPNPGSFDELHR-LCKDVFPAQMEGVKLVVNK 54
Query: 63 GLNQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNAR 122
L+ F ++H+V M +P T ++ + P ++G + + G LNA+
Sbjct: 55 VLSSHFQVAHTVHMSALGLPGYHLHTAY--AGDWQLSPTEVFPT--VVGDMDSSGSLNAQ 110
Query: 123 VKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFG------ASYI 176
V L++ L KA Q T + + +Y+G DY GN L G A ++
Sbjct: 111 VLLLLAERLRAKAVFQ-TQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFL 169
Query: 177 QNVSPHLSLGGEVFWAGQHRKSG 199
Q+++ L LGGE+ + HR+ G
Sbjct: 170 QSITHRLVLGGELVY---HRRPG 189
>sp|A4F267|TM40L_RAT Mitochondrial import receptor subunit TOM40B OS=Rattus norvegicus
GN=Tomm40l PE=1 SV=1
Length = 308
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 3 GLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTK 62
GL P GT + +P LP P ++E+HR + P EG++ K
Sbjct: 6 GLAPMGTLPRWSHRREEP----------LPNPGSFDELHR-LCKDVFPAQMEGVKLVVNK 54
Query: 63 GLNQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNAR 122
L+ F ++H+V M +P T ++ + P ++G + + G LNA+
Sbjct: 55 VLSSHFQVAHTVHMSALGLPGYHLHTAY--AGDWQLSPTEVFPT--VVGDMDSSGSLNAQ 110
Query: 123 VKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFG------ASYI 176
V L++ L KA Q T + + +Y+G DY GN L G A ++
Sbjct: 111 VLLLLAERLRAKAVFQ-TQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFL 169
Query: 177 QNVSPHLSLGGEVFWAGQHRKSG 199
Q+++ L LGGE+ + HR+ G
Sbjct: 170 QSITHRLVLGGELVY---HRRPG 189
>sp|Q969M1|TM40L_HUMAN Mitochondrial import receptor subunit TOM40B OS=Homo sapiens
GN=TOMM40L PE=2 SV=1
Length = 308
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 25/203 (12%)
Query: 3 GLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTK 62
GL P GT + P+ EE LP P ++E+HR + P EG++ K
Sbjct: 6 GLAPMGTLPR-----RSPRREEP-----LPNPGSFDELHR-LCKDVFPAQMEGVKLVVNK 54
Query: 63 GLNQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNAR 122
L+ F ++H++ M +P ++ + P + +G + + G LNA+
Sbjct: 55 VLSSHFQVAHTIHMSALGLPGYHLHAAY--AGDWQLSPTEVFPTV--VGDMDSSGSLNAQ 110
Query: 123 VKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFG------ASYI 176
V L++ L KA Q T + + +Y+G DY GN L G A ++
Sbjct: 111 VLLLLAERLRAKAVFQ-TQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFL 169
Query: 177 QNVSPHLSLGGEVFWAGQHRKSG 199
Q+++ L LGGE+ + HR+ G
Sbjct: 170 QSLTHRLVLGGELVY---HRRPG 189
>sp|A6QR22|TM40L_BOVIN Mitochondrial import receptor subunit TOM40B OS=Bos taurus
GN=TOMM40L PE=2 SV=1
Length = 308
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 3 GLVPPGTTVKPDASTAKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTK 62
GL P G + P+ EE LP P ++E+HR + P EG++ K
Sbjct: 6 GLAPMGALPR-----RSPRREEP-----LPNPGSFDELHR-LCKDVFPAQMEGVKLVVNK 54
Query: 63 GLNQKFSLSHSVIMGPTEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNAR 122
L+ F ++H+V M +P ++ + P + +G + + G LNA+
Sbjct: 55 VLSSHFQVAHTVHMSALGLPGYHLHAAY--AGDWQLSPTEVFPTV--VGDMDSGGSLNAQ 110
Query: 123 VKCDLSDNLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGNGALFG------ASYI 176
V L++ L KA Q T + + +Y+G DY GN L G A ++
Sbjct: 111 VLLLLAERLRAKAVFQ-TQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIVVAHFL 169
Query: 177 QNVSPHLSLGGEVFWAGQHRKSG 199
Q+++ L LGGE+ + HR+ G
Sbjct: 170 QSLTHRLVLGGELVY---HRRPG 189
>sp|P23644|TOM40_YEAST Mitochondrial import receptor subunit TOM40 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TOM40 PE=1
SV=1
Length = 387
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 32/208 (15%)
Query: 38 EEIHREALMSLKPELFEGLRFDFTKG--LNQKFSLSHSVIMGPTEIPSQSTETIKIPTAH 95
+E+ R+ +S F GLR D K +N F SH+ +G +P
Sbjct: 68 KEVSRDVFLS--QYFFTGLRADLNKAFSMNPAFQTSHTFSIGSQALP------------K 113
Query: 96 YEFGANYIDPKLMLIGRVLTDGRLNARVKCDLSDNLSLKANAQLTN-EPHMSHGMINFDY 154
Y F A + + L G + D ++ R+ K N Q+++ +P M + DY
Sbjct: 114 YAFSALFANDNLFAQGNIDNDLSVSGRLNYGWDKKNISKVNLQISDGQPTMCQ--LEQDY 171
Query: 155 KGKDYRTQFQFGN------GALFG---ASYIQNVSPHLSLGGEVFWAGQHRK----SGIG 201
+ D+ + N G G AS++Q+V+P L+LG E ++ +G+
Sbjct: 172 QASDFSVNVKTLNPSFSEKGEFTGVAVASFLQSVTPQLALGLETLYSRTDGSAPGDAGVS 231
Query: 202 YAARYENDKMVMYFICVLHMMFAVIWSI 229
Y RY + K F L A+I S+
Sbjct: 232 YLTRYVSKKQDWIFSGQLQANGALIASL 259
>sp|P24391|TOM40_NEUCR Mitochondrial import receptor subunit tom-40 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tom-40 PE=1 SV=1
Length = 349
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 75/206 (36%), Gaps = 31/206 (15%)
Query: 23 EEKVDYMNLPCPIPYEEIHREALMS--LKPELFEGLRFDFTKGLNQK--FSLSHSVIMGP 78
+E+ L P E I RE L +F GLR D TK + F +SH MG
Sbjct: 30 QERRKQFGLSNPGTIETIAREVQRDTLLTNYMFSGLRADVTKAFSLAPLFQVSHQFAMGE 89
Query: 79 TEIPSQSTETIKIPTAHYEFGANYIDPKLMLIGRVLTDGRLNARVKCDLSDNLSLKANAQ 138
P Y F A Y ++ G + +G L+ R D K
Sbjct: 90 RLNP-------------YAFAALYGTNQIFAQGNLDNEGALSTRFNYRWGDRTITKTQFS 136
Query: 139 LTNEPHMSHGMINFDYKGKDYRTQFQ-----FGNGALFG---ASYIQNVSPHLSLGGEVF 190
+ M+ ++ G D+ + F +G L G Y+Q V+P L LG +
Sbjct: 137 IGGGQDMAQ--FEHEHLGDDFSASLKAINPSFLDGGLTGIFVGDYLQAVTPRLGLGLQAV 194
Query: 191 WAGQHRKSG----IGYAARYENDKMV 212
W Q G I Y ARY+ V
Sbjct: 195 WQRQGLTQGPDTAISYFARYKAGDWV 220
>sp|Q18090|TOM40_CAEEL Mitochondrial import receptor subunit TOM40 homolog
OS=Caenorhabditis elegans GN=C18E9.6 PE=3 SV=1
Length = 301
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 37/215 (17%)
Query: 18 AKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMG 77
A P E E + P YEE+HR+A + P FEG + KGL+ F +SH++
Sbjct: 2 ATPTESELASPIPQTNPGSYEELHRKA-RDVFPTCFEGAKLMVNKGLSSHFQVSHTL--- 57
Query: 78 PTEIPSQSTETIKIPTAHYEFGANYIDPKL--------MLIGRVLTDGRLNARVKCDLSD 129
++ Y FGA Y+ +L+G +G A + L
Sbjct: 58 ----------SLSAMNTGYRFGATYVGTNQVGPAEAYPILLGDTDVNGNTTATILHQLGI 107
Query: 130 NLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGN-------GALFGASYIQNVSPH 182
+ K Q+ + ++ + KG+ N G L G +++ ++P
Sbjct: 108 YRT-KLQGQI-QQGKLAGAQATIERKGRLSTLGLTLANIDLVNEAGILVG-QFLRRLTPR 164
Query: 183 LSLGGE-VFWAGQHRKSG----IGYAARYENDKMV 212
L +G E V+ G++ G + YAARY + +
Sbjct: 165 LDVGTEMVYQYGKNIPGGQISVLSYAARYTANHFI 199
>sp|Q61Z83|TOM40_CAEBR Mitochondrial import receptor subunit TOM40 homolog
OS=Caenorhabditis briggsae GN=CBG03225 PE=3 SV=1
Length = 301
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 37/215 (17%)
Query: 18 AKPKEEEKVDYMNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMG 77
A P E E + P YEE+HR+A + P FEG + KGL+ F +SH++
Sbjct: 2 ATPTESEFAAPIPQTNPGSYEELHRKA-RDVFPTCFEGAKLMVNKGLSSHFQVSHTL--- 57
Query: 78 PTEIPSQSTETIKIPTAHYEFGANYIDPKL--------MLIGRVLTDGRLNARVKCDLSD 129
++ Y FGA Y+ +L+G +G A + +
Sbjct: 58 ----------SLSAMNTGYRFGATYVGTNQVGPAEAYPILLGDTDVNGNTTATILHQMGI 107
Query: 130 NLSLKANAQLTNEPHMSHGMINFDYKGKDYRTQFQFGN-------GALFGASYIQNVSPH 182
+ K Q+ + ++ + KG+ N G L G +++ ++P
Sbjct: 108 YRT-KLQGQI-QQGKLAGAQATIERKGRLSTLGLTLANIDLVNEAGILVG-QFLRRLTPR 164
Query: 183 LSLGGE-VFWAGQHRKSG----IGYAARYENDKMV 212
L +G E V+ G++ G + YAARY + +
Sbjct: 165 LDVGTEMVYQYGKNIPGGQISVLSYAARYTANHFI 199
>sp|P82013|VDAC2_MELGA Voltage-dependent anion-selective channel protein 2 OS=Meleagris
gallopavo GN=VDAC2 PE=1 SV=1
Length = 282
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 154 YKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSGIGYAARYEND 209
YK D++ +G+ FG S Q VS +L + W + G AA+Y+ D
Sbjct: 172 YKTGDFQLHTNVNDGSEFGGSIYQKVSDNLETAVNLAWTAGSNSTRFGIAAKYKLD 227
>sp|P23739|SUIS_RAT Sucrase-isomaltase, intestinal OS=Rattus norvegicus GN=Si PE=1 SV=5
Length = 1841
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 18/189 (9%)
Query: 31 LPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVIMGPTEIPSQSTETIK 90
+P P + E + +++ + + RF T N+++ + H + T IP+ T
Sbjct: 143 IPSPTLFGEDIKSVILTTQTQTGNRFRFKITDPNNKRYEVPHQFVKEETGIPAADT-LYD 201
Query: 91 IPTAHYEFGANYIDPKLMLIGRVLTDGRLNARVKCDLSDNLSLKANAQLTNEPHMSHGMI 150
+ + F I + N +V CD S L +N L + I
Sbjct: 202 VQVSENPFSIKVIR-------------KSNNKVLCDTSVGPLLYSNQYLQISTRLPSEYI 248
Query: 151 NFDYKG---KDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSGIGYAARYE 207
+ + G K +R + +F I + H G + F+ G SG Y
Sbjct: 249 -YGFGGHIHKRFRHDLYWKTWPIFTRDEIPGDNNHNLYGHQTFFMGIGDTSGKSYGVFLM 307
Query: 208 NDKMVMYFI 216
N + FI
Sbjct: 308 NSNAMEVFI 316
>sp|Q29380|VDAC3_PIG Voltage-dependent anion-selective channel protein 3 OS=Sus scrofa
GN=VDAC3 PE=2 SV=2
Length = 283
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 140 TNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSG 199
T + +S YK D++ +G FG S Q V+ + + W +
Sbjct: 159 TAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTR 218
Query: 200 IGYAARYEND 209
G AA+Y+ D
Sbjct: 219 FGIAAKYKLD 228
>sp|Q60931|VDAC3_MOUSE Voltage-dependent anion-selective channel protein 3 OS=Mus musculus
GN=Vdac3 PE=1 SV=1
Length = 283
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 140 TNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSG 199
T + +S YK D++ +G FG S Q V+ + + W +
Sbjct: 159 TAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNERIETSINLAWTAGSNNTR 218
Query: 200 IGYAARYEND 209
G AA+Y+ D
Sbjct: 219 FGIAAKYKLD 228
>sp|Q9TT13|VDAC3_RABIT Voltage-dependent anion-selective channel protein 3 OS=Oryctolagus
cuniculus GN=VDAC3 PE=2 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 140 TNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSG 199
T + +S YK D++ +G FG S Q V+ + + W +
Sbjct: 159 TAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTR 218
Query: 200 IGYAARYEND 209
G AA+Y+ D
Sbjct: 219 FGIAAKYKLD 228
>sp|Q9MZ13|VDAC3_BOVIN Voltage-dependent anion-selective channel protein 3 OS=Bos taurus
GN=VDAC3 PE=2 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 140 TNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSG 199
T + +S YK D++ +G FG S Q V+ + + W +
Sbjct: 159 TAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTR 218
Query: 200 IGYAARYEND 209
G AA+Y+ D
Sbjct: 219 FGIAAKYKLD 228
>sp|Q60932|VDAC1_MOUSE Voltage-dependent anion-selective channel protein 1 OS=Mus musculus
GN=Vdac1 PE=1 SV=3
Length = 296
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 140 TNEPHMSHGMINFDYKGKDYRTQFQFGNGALFGASYIQNVSPHLSLGGEVFWAGQHRKSG 199
T++ ++ YK +++ +G FG S Q V+ L + W + +
Sbjct: 172 TSKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTR 231
Query: 200 IGYAARYEND 209
G AA+Y+ D
Sbjct: 232 FGIAAKYQVD 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,487,712
Number of Sequences: 539616
Number of extensions: 3830076
Number of successful extensions: 7196
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7153
Number of HSP's gapped (non-prelim): 37
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)