Query 026416
Match_columns 239
No_of_seqs 117 out of 931
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 13:06:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ibx_A TENA, HP1287, putative 100.0 1.9E-55 6.6E-60 371.2 20.7 214 10-238 3-221 (221)
2 3no6_A Transcriptional activat 100.0 7.5E-56 2.6E-60 379.6 18.3 213 10-238 18-237 (248)
3 3mvu_A TENA family transcripti 100.0 2.4E-55 8.4E-60 371.8 20.7 213 9-238 4-226 (226)
4 4fn6_A Thiaminase-2, thiaminas 100.0 8.3E-55 2.9E-59 369.2 18.8 211 12-238 1-218 (229)
5 2qcx_A Transcriptional activat 100.0 2.2E-52 7.6E-57 361.1 26.4 212 11-238 27-242 (263)
6 2f2g_A SEED maturation protein 100.0 3E-53 1E-57 357.5 18.2 211 11-238 3-220 (221)
7 1z72_A Transcriptional regulat 100.0 3.5E-52 1.2E-56 352.0 23.3 207 12-237 14-224 (225)
8 1rtw_A Transcriptional activat 100.0 9.4E-52 3.2E-56 348.4 22.6 204 14-238 2-208 (220)
9 2gm8_A TENA homolog/THI-4 thia 100.0 1.2E-51 4E-56 348.1 19.6 209 10-238 7-220 (221)
10 3rm5_A Hydroxymethylpyrimidine 100.0 1.2E-50 4.2E-55 382.4 25.9 215 9-238 327-549 (550)
11 2qzc_A Transcriptional activat 100.0 2.3E-51 7.7E-56 344.6 17.5 202 11-238 4-209 (214)
12 1udd_A Transcriptional regulat 100.0 3.9E-51 1.3E-55 345.9 18.0 208 11-238 2-214 (226)
13 1wwm_A Hypothetical protein TT 100.0 6.1E-49 2.1E-53 324.4 19.0 189 12-236 2-190 (190)
14 2a2m_A Hypothetical protein BT 100.0 1.7E-48 6E-53 335.7 22.3 203 11-238 47-251 (258)
15 3oql_A TENA homolog; transcrip 100.0 1.6E-42 5.6E-47 297.7 14.1 219 2-237 9-246 (262)
16 1rcw_A CT610, CADD; iron, DI-i 100.0 4.4E-35 1.5E-39 247.4 15.4 203 11-238 5-221 (231)
17 3dde_A TENA/THI-4 protein, dom 100.0 2.5E-31 8.7E-36 226.1 13.8 206 12-237 2-219 (239)
18 3hlx_A Pyrroloquinoline-quinon 100.0 2.8E-28 9.6E-33 208.9 17.4 202 11-237 9-227 (258)
19 3bjd_A Putative 3-oxoacyl-(acy 99.9 2.6E-22 8.9E-27 178.2 14.8 203 11-237 107-324 (332)
20 3b5o_A CADD-like protein of un 99.3 1E-10 3.6E-15 97.6 14.7 182 28-236 23-226 (244)
21 1wov_A Heme oxygenase 2; HOMO 98.1 0.00021 7.1E-09 60.5 16.3 109 12-132 2-112 (250)
22 1wzd_A Heme oxygenase; electro 98.0 0.00033 1.1E-08 57.8 15.4 111 10-132 4-117 (215)
23 2q32_A Heme oxygenase 2, HO-2; 97.9 0.00053 1.8E-08 58.4 15.6 112 10-132 29-142 (264)
24 1n45_A Heme oxygenase 1, HO-1; 97.8 0.0046 1.6E-07 51.5 19.9 112 10-132 9-122 (233)
25 1we1_A Heme oxygenase 1; oxido 97.8 0.0012 4E-08 55.5 16.0 109 12-132 3-113 (240)
26 1j02_A Heme oxygenase 1; alpha 97.7 0.0034 1.2E-07 53.5 17.5 112 10-132 9-122 (267)
27 1sk7_A Hypothetical protein PA 89.6 0.86 2.9E-05 36.6 6.8 65 1-68 1-65 (198)
28 1j77_A HEMO, heme oxygenase; p 80.9 4 0.00014 32.9 6.7 58 8-68 5-62 (209)
29 3ov9_A Nucleoprotein; orthogon 50.7 84 0.0029 25.8 8.4 90 28-122 142-235 (245)
30 4h5l_A Nucleoprotein; nucleoca 46.9 88 0.003 25.9 8.1 91 28-123 148-242 (253)
31 1dvk_A PRP18; PRE-mRNA splicin 45.2 20 0.00067 28.1 3.7 83 33-131 67-158 (173)
32 2veb_A Protoglobin; hemoprotei 44.3 38 0.0013 27.0 5.4 49 183-238 143-191 (195)
33 1unk_A Colicin E7; immunity pr 35.3 40 0.0014 23.3 3.6 40 174-227 7-47 (87)
34 3u43_A Colicin-E2 immunity pro 32.2 56 0.0019 22.9 4.0 38 174-225 7-44 (94)
35 1vp7_A Exodeoxyribonuclease VI 30.2 1.1E+02 0.0036 21.7 5.2 38 179-227 29-66 (100)
36 2f3y_B Voltage-dependent L-typ 29.0 21 0.00073 18.7 1.0 9 49-57 4-12 (26)
37 2be6_D Voltage-dependent L-typ 24.9 39 0.0013 19.3 1.7 16 42-57 5-21 (37)
38 3bt5_A Uncharacterized protein 21.0 2.5E+02 0.0087 21.5 6.5 60 53-112 102-163 (177)
39 2k0d_X IMME7, colicin-E7 immun 20.8 1.8E+02 0.0062 20.5 4.9 40 174-226 14-53 (101)
40 3l9k_W Dynein intermediate cha 20.7 1E+02 0.0035 17.7 3.0 24 175-198 8-31 (38)
No 1
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=100.00 E-value=1.9e-55 Score=371.22 Aligned_cols=214 Identities=15% Similarity=0.191 Sum_probs=197.8
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..|+|+++|+++++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..++.
T Consensus 3 ~~M~f~~~L~~~~~~~~~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~~~ 77 (221)
T 3ibx_A 3 FTMQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACD-----EAVMREFSN 77 (221)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-----HHHHHHHHH
T ss_pred CcchHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999 788999999
Q ss_pred HHhhH-HHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-
Q 026416 90 GMAGL-HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT- 164 (239)
Q Consensus 90 ~~~~~-~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~- 164 (239)
.+..+ .+|+.+|+++++.+||+.+ ..+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++.....
T Consensus 78 ~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~~~ 156 (221)
T 3ibx_A 78 AIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG-FKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNA 156 (221)
T ss_dssp HHHHHHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHTHHHHHHHHHHHHHHTCSSST
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88665 5799999999999999974 4789999999999999995 6789999999999999999999999865421
Q ss_pred CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+.+++|++||++|+|++|.+.|+.+++++|++++..++ +++++|.++|+++|++|++||||||++
T Consensus 157 ~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 221 (221)
T 3ibx_A 157 LEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSK---------QEIEKLKEIFITTSEYEYLFWDMAYQS 221 (221)
T ss_dssp TTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23568999999999999999999999999999988888 899999999999999999999999974
No 2
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=100.00 E-value=7.5e-56 Score=379.63 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=196.4
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..++|+++|+++++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..++.
T Consensus 18 ~~~~ft~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~-----~~~~~~~~~ 92 (248)
T 3no6_A 18 QGMTFSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSS-----MEDVKFLVE 92 (248)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSC-----HHHHHHHHH
T ss_pred CCccHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999 888999999
Q ss_pred HHhhH-HHHHHHHHHHHHHcCCCCC----CCCCchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026416 90 GMAGL-HDEIAWFKKEASKWGVELS----ETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 90 ~~~~~-~~E~~~~~~~~~~~gi~~~----~~~~~pa~~~Y~~~l~~~a~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
.++.+ .+|+++|+++++.+||+.+ ..+++|+|.+||+||++++ .. ++++++++|++||+|+|.+||+++....
T Consensus 93 ~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a-~~~g~~~~~laAl~PC~w~Y~eig~~l~~~~ 171 (248)
T 3no6_A 93 QIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNA-FARENAAFTIAAMAPCPYVYAVIGKRAMEDP 171 (248)
T ss_dssp HHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHH-HHCSSTHHHHHHHTHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88764 6799999999999999963 4689999999999999995 55 8999999999999999999999876543
Q ss_pred C-CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 164 T-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~-~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
. ..+++|++||++|+ ++|.+.|+.+++++|++++..++ +++++|.++|+++|++|++||||||+.
T Consensus 172 ~~~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~ay~~ 237 (248)
T 3no6_A 172 KLNKESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSE---------TEKKEIKENFLQSTIHERHFFNMAYIN 237 (248)
T ss_dssp TCCTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 13468999999999 99999999999999999988888 899999999999999999999999864
No 3
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=100.00 E-value=2.4e-55 Score=371.83 Aligned_cols=213 Identities=19% Similarity=0.246 Sum_probs=196.2
Q ss_pred cccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHH
Q 026416 9 AGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVIL 88 (239)
Q Consensus 9 ~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~ 88 (239)
++..+|+++|+++++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..+.
T Consensus 4 ~p~g~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~-----~~~~~~~~ 78 (226)
T 3mvu_A 4 EPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSET-----HSEMLAAV 78 (226)
T ss_dssp STTCHHHHHHHHHTTTHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-----HHHHHHHH
T ss_pred CCCCcHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHH
Confidence 3456899999999999999999999999999999999999999999999999999999999999999 78899999
Q ss_pred HHHhhHH-HHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 026416 89 GGMAGLH-DEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT 164 (239)
Q Consensus 89 ~~~~~~~-~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~ 164 (239)
..++.+. +|+.+|+++++.+||+.+ ..+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++...
T Consensus 79 ~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~-- 155 (226)
T 3mvu_A 79 GTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAG-YSGDLLDLLAALAPCVMGYGEIGKRLTAE-- 155 (226)
T ss_dssp HHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 8887665 599999999999999974 5789999999999999995 66899999999999999999999987653
Q ss_pred CCCchHHHHhhhcCChHHHHHHHHHHHHHH-----HHHh-hcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIAN-----RLLE-KASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld-----~~~~-~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+.+++|++||++|+|++|.+.|+.+++++| +++. ..++ +++++|.++|+++|++|++||||||++
T Consensus 156 ~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 226 (226)
T 3mvu_A 156 ATSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSS---------PRWSRLCQTFHTATELEVGFWQMGLTP 226 (226)
T ss_dssp CSCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGS---------HHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccCh---------HHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 235689999999999999999999999999 8877 6677 899999999999999999999999974
No 4
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=100.00 E-value=8.3e-55 Score=369.22 Aligned_cols=211 Identities=14% Similarity=0.172 Sum_probs=195.5
Q ss_pred CchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026416 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
|+|+++|++.++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..+...+
T Consensus 1 M~ft~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~-----~~~~~~~~~~~ 75 (229)
T 4fn6_A 1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNS-----MNDVKFLVEQI 75 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCS-----HHHHHHHHHHH
T ss_pred CcHHHHHHHhHHHHHHHHHCChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999 78899999888
Q ss_pred hhH-HHHHHHHHHHHHHcCCCCC----CCCCchHhHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 026416 92 AGL-HDEIAWFKKEASKWGVELS----ETVPQKANQVYCRFLESLMSPE-VDYTVAITVFWAIEAVYQESFAHCLEPDTN 165 (239)
Q Consensus 92 ~~~-~~E~~~~~~~~~~~gi~~~----~~~~~pa~~~Y~~~l~~~a~~~-~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~ 165 (239)
+.+ .+|+.+|+++++.+||+.+ ..+++|+|.+|++||++++ .. ++++++++|++||+|+|.+||+++......
T Consensus 76 ~~~~~~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a-~~~~~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~ 154 (229)
T 4fn6_A 76 EFMVEGEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQA-HSRENAIYTIAAMAPCPYIYAELAKRSQSDHKL 154 (229)
T ss_dssp HHHHSCCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHH-HHCCSHHHHHHHHTHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 764 6799999999999999864 4589999999999999995 55 899999999999999999999988654321
Q ss_pred -CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 166 -TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 -~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|++||++|+ ++|.+.|+.+++++|++++..++ +++++|.++|+++|++|++||||||+.
T Consensus 155 ~~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~F~~a~~lE~~Fwd~a~~~ 218 (229)
T 4fn6_A 155 NREKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSD---------KELEQVKQVFLESCIHERRFFNMAMTL 218 (229)
T ss_dssp CTTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3468999999999 99999999999999999988888 899999999999999999999999974
No 5
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=100.00 E-value=2.2e-52 Score=361.05 Aligned_cols=212 Identities=18% Similarity=0.204 Sum_probs=196.9
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|+++|++.++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..+...
T Consensus 27 mm~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~-----~~~~~~l~~~ 101 (263)
T 2qcx_A 27 GMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKD-----LYTTGRMASH 101 (263)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999 7889999998
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026416 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
+.. +.+|+.+|+++++.+||+.+ +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++.....+
T Consensus 102 i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a-~~g~~~~~laAl~pC~w~Y~~ig~~l~~~~~~- 179 (263)
T 2qcx_A 102 AQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSV-LSGNFAEILAALLPCYWLYYEVGEKLLHCDPG- 179 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 875 56799999999999999964 5789999999999999995 67899999999999999999999998654332
Q ss_pred CchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+++|.+||+.|++++|.+.|..+++++|++++..++ ++++++.++|+++|++|++||||+|+.
T Consensus 180 ~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 242 (263)
T 2qcx_A 180 HPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTE---------EVRAKMKENFVISSYYEYQFWGMAYRK 242 (263)
T ss_dssp SHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999988888 889999999999999999999999864
No 6
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=100.00 E-value=3e-53 Score=357.52 Aligned_cols=211 Identities=65% Similarity=1.124 Sum_probs=193.9
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhH----HHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGD----TEV 86 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~----~~~ 86 (239)
.++|+++|++.++++|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .++ +..
T Consensus 3 ~~~f~~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~ 77 (221)
T 2f2g_A 3 KRGVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACK-----DSGESSDMEV 77 (221)
T ss_dssp --CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCSCTTHHHH
T ss_pred CCcHHHHHHHhCHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhhHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999 566 889
Q ss_pred HHHHHhhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHHHhhccC--CC
Q 026416 87 ILGGMAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESL-MSPEVDYTVAITVFWAIEAVYQESFAHCLE--PD 163 (239)
Q Consensus 87 l~~~~~~~~~E~~~~~~~~~~~gi~~~~~~~~pa~~~Y~~~l~~~-a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~--~~ 163 (239)
++..+..+.+|+.+|+++++.+||+.++.+++|+|.+|++||+++ + ..++++++++|++||+|+|.+||+++.. ..
T Consensus 78 l~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~p~~~aY~~~l~~~~~-~~~~~~~~~aAl~pc~~~Y~~i~~~l~~~~~~ 156 (221)
T 2f2g_A 78 VLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRANQEYGRFLEDLMS-SEVKYPVIMTAFWAIEAVYQESFAHCLEDGNK 156 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHHHHHHTTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhcCCCHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999886688899999999999999987788999999999999999 6 5679999999999999999999988754 22
Q ss_pred CCCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 164 TNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
. +++|.+||+.|++++|.+.|..+++++|++++..++ ++++++.++|+++|++|++||||+|+.
T Consensus 157 ~--~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2f2g_A 157 T--PVELTGACHRWGNDGFKQYCSSVKNIAERCLENASG---------EVLGEAEDVLVRVLELEVAFWEMSRGG 220 (221)
T ss_dssp S--SSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCH---------HHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred C--CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 237999999999999999999999999999988888 889999999999999999999999974
No 7
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=100.00 E-value=3.5e-52 Score=352.01 Aligned_cols=207 Identities=17% Similarity=0.213 Sum_probs=190.5
Q ss_pred CchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026416 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
++|+++|++.++++|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++ .+++..+...+
T Consensus 14 ~~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~~~ 88 (225)
T 1z72_A 14 GLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADK-----LESKLRFAKQL 88 (225)
T ss_dssp HHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-----HHHHHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999999999999999999999999 78899999888
Q ss_pred hh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 026416 92 AG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTP 167 (239)
Q Consensus 92 ~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~ 167 (239)
+. +.+|+.+|+++++.+||+.+ +.+++|+|.+|++||++++ ..++++++++|++||+|+|.+||++ ... .+.+
T Consensus 89 ~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~~aAl~pc~~~Y~~i~~~-~~~-~~~~ 165 (225)
T 1z72_A 89 GFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAV-ASSDYAHLLVMLVIAEGLYLDWGSK-DLA-LPEV 165 (225)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHTC-SSC-CCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHh-hcc-CCCc
Confidence 66 57799999999999999974 5789999999999999995 6789999999999999999999988 432 3445
Q ss_pred chHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhcc
Q 026416 168 PELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 168 ~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~ 237 (239)
++|++||+.|++++|.+.|+.+++++|+++.. ++ +++ ++.++|+++|++|++||||+|+
T Consensus 166 ~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~---------~~~-~~~~~f~~a~~lE~~Fwd~a~~ 224 (225)
T 1z72_A 166 YIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-RE---------DLT-ELQQRWNQAVALELAFFDIGYD 224 (225)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CC---------CHH-HHHHHHHHHHHHHHHHTTTTC-
T ss_pred chHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CH---------HHH-HHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999887 76 677 9999999999999999999986
No 8
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=100.00 E-value=9.4e-52 Score=348.40 Aligned_cols=204 Identities=25% Similarity=0.387 Sum_probs=188.9
Q ss_pred hHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhH---HHHHHHH
Q 026416 14 VIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGD---TEVILGG 90 (239)
Q Consensus 14 ~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~---~~~l~~~ 90 (239)
|+++|++.++++|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .++ +..+...
T Consensus 2 f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~~~~l~~~ 76 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPD-----DLLPFFAESIYYI 76 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG-----GGHHHHHHHHHHH
T ss_pred hHHHHHHcCHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhhHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999 788 8899888
Q ss_pred HhhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchH
Q 026416 91 MAGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPEL 170 (239)
Q Consensus 91 ~~~~~~E~~~~~~~~~~~gi~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y 170 (239)
++.+ |+.+|+ ++.+||+. +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++.....+ +++|
T Consensus 77 ~~~i--E~~lh~--~~~~Gi~~-~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~i~~~l~~~~~~-~~~y 149 (220)
T 1rtw_A 77 SKEL--EMFEKK--AQELGISL-NGEIDWRAKSYVNYLLSVA-SLGSFLEGFTALYCEEKAYYEAWKWVRENLKE-RSPY 149 (220)
T ss_dssp HHHH--HHHHHH--HHHTTCCS-SSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHHHCSS-CCTT
T ss_pred HHHH--HHHHHH--HHHCCCCC-CCCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchH
Confidence 8776 999999 89999998 7889999999999999995 67799999999999999999999987543222 3689
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 171 QEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 171 ~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
.+||+.|++++|.+.|..+++++|++++..++ ++++++.++|+++|++|++||||+|+.
T Consensus 150 ~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 208 (220)
T 1rtw_A 150 QEFINHWSSQEFGEYVKRIEKILNSLAEKHGE---------FEKERAREVFKEVSKFELIFWDIAYGG 208 (220)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCH---------HHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999988888 889999999999999999999999864
No 9
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=100.00 E-value=1.2e-51 Score=348.09 Aligned_cols=209 Identities=18% Similarity=0.201 Sum_probs=190.4
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
..-+.+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+|+ .+++..+..
T Consensus 7 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~-----~~~~~~l~~ 81 (221)
T 2gm8_A 7 HHHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPS-----VDLMKTALE 81 (221)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----HHHHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHH
Confidence 345788999999999999999999999999999999999999999999999999999999999999 788999999
Q ss_pred HHhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-
Q 026416 90 GMAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT- 164 (239)
Q Consensus 90 ~~~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~- 164 (239)
.++. +.+|+.+|+++++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++.....
T Consensus 82 ~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~ 160 (221)
T 2gm8_A 82 LAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTC-ALEGFYQCMAALLPCFWSYAEIAERHGGKLRE 160 (221)
T ss_dssp HHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hcCCHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 8876 78899999999999999964 4789999999999999995 6789999999999999999999998764321
Q ss_pred CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 165 NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 165 ~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
..+++|.+||+.|++++|.+.|+.+++++|++ + ++++++.++|+++|++|++||||+|+.
T Consensus 161 ~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 220 (221)
T 2gm8_A 161 NPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----G---------LSAEELWPYFKEASLYELEFWQAAYEG 220 (221)
T ss_dssp CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----S---------CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----h---------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12478999999999999999999999999997 3 457799999999999999999999975
No 10
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-50 Score=382.42 Aligned_cols=215 Identities=18% Similarity=0.257 Sum_probs=197.1
Q ss_pred cccCchHHHHHH--HcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHH
Q 026416 9 AGKGGVIDTWLR--KHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEV 86 (239)
Q Consensus 9 ~~~~~~~~~L~~--~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~ 86 (239)
...++|+++||+ +++|+|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+|+ .+++..
T Consensus 327 ~~~~~f~~~L~~~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~-----~~~~~~ 401 (550)
T 3rm5_A 327 IPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPC-----LEDMEK 401 (550)
T ss_dssp CCSSCHHHHHHHSTTTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-----HHHHHH
T ss_pred CCCchHHHHHHhCchhhHHHHHHhCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHH
Confidence 356789999999 9999999999999999999999999999999999999999999999999999999 788888
Q ss_pred HHHHHhhHHHHHHHHHH-HHHHcCC-CCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccC
Q 026416 87 ILGGMAGLHDEIAWFKK-EASKWGV-ELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLE 161 (239)
Q Consensus 87 l~~~~~~~~~E~~~~~~-~~~~~gi-~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~ 161 (239)
+...++.+.+|+.+|++ +++.||| +.+ ..+++|+|.+|++||++++ ..++++++++|++||+|+|.+||+++..
T Consensus 402 ~~~~~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a-~~g~~~~~~aAl~pC~~~Y~~ig~~l~~ 480 (550)
T 3rm5_A 402 ELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVS-RRGNWQELVASLTPCLMGYGEALTKMKG 480 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888778889999999 6779999 653 5789999999999999995 6689999999999999999999998764
Q ss_pred CCC-CCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 162 PDT-NTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 162 ~~~-~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
... +.+++|++||++|+|++|.++|+++++++|++++..++ +++++|+++|+++|+||++||||||+-
T Consensus 481 ~~~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~~~~l~~~F~~a~~lE~~Fwd~a~~~ 549 (550)
T 3rm5_A 481 KVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPP---------EQLDTLVTIYAEVCELETNFWTAALEY 549 (550)
T ss_dssp CCCSCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCG---------GGHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 322 23468999999999999999999999999999988888 899999999999999999999999863
No 11
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=100.00 E-value=2.3e-51 Score=344.64 Aligned_cols=202 Identities=15% Similarity=0.158 Sum_probs=185.4
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
+|+|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+ + .+++..+...
T Consensus 4 ~M~f~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~~~~~ 77 (214)
T 2qzc_A 4 IVGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-P-----IDKVTKILNL 77 (214)
T ss_dssp CCHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-C-----HHHHHHHHHH
T ss_pred ccHHHHHHHHhhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999 8 7889999998
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 026416 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNT 166 (239)
Q Consensus 91 ~~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~ 166 (239)
++. +.+|+.+|+++++.+||+.+ +.+++|+|.+|++||++++ .. +++++++|++||+|+|.+||+++... +
T Consensus 78 ~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~-~~~~~~aAl~pc~~~Y~~ig~~l~~~--~- 152 (214)
T 2qzc_A 78 VFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYA-NL-DWNKFLVAWTPCMFGYSIVGDYVIDS--P- 152 (214)
T ss_dssp HTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HH-CHHHHHHHHHHHHHHHHHHHHHHTTC--S-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHH-hc-CHHHHHHHHHHHHHHHHHHHHHHHhC--C-
Confidence 876 78899999999999999974 4789999999999999995 56 99999999999999999999987653 3
Q ss_pred CchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 167 PPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 167 ~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
+++|++||+.|++++|.+.|+.+++++|++ + ++++ +.++|+++|++|++|||++|+.
T Consensus 153 ~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~---------~~~~-~~~~f~~a~~~E~~Fwd~a~~~ 209 (214)
T 2qzc_A 153 NEVYKTWASFYASTEYKKRIEAILYALDEV-----S---------ITED-LLNIFINSVRFEIGFWDASLRK 209 (214)
T ss_dssp CHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----C---------CCHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----c---------cHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999987 3 4577 9999999999999999999864
No 12
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=100.00 E-value=3.9e-51 Score=345.91 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=187.9
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
-|+|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+ + .+++..+...
T Consensus 2 ~M~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~-----~~~~~~l~~~ 75 (226)
T 1udd_A 2 RVMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-E-----YPLMAELIEL 75 (226)
T ss_dssp CCCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-C-----TTHHHHHHHH
T ss_pred CCcHHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999 8 6778899988
Q ss_pred Hhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCC-C
Q 026416 91 MAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDT-N 165 (239)
Q Consensus 91 ~~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~-~ 165 (239)
++. +.+|+.+|+++++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .
T Consensus 76 ~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a-~~~~~~~~laAl~pc~~~Y~~ig~~l~~~~~~~ 154 (226)
T 1udd_A 76 ARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA-YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDN 154 (226)
T ss_dssp HHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHTHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 876 67899999999999999964 4789999999999999995 6789999999999999999999998754211 1
Q ss_pred CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
.+++|.+||+.|++++|.+.|+.+++++|++ +. ++++++.++|+++|++|++||||+|+.
T Consensus 155 ~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~----~~---------~~~~~~~~~f~~a~~lE~~Fwd~a~~~ 214 (226)
T 1udd_A 155 PIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GH---------SGYDRLRRIFITGSKFELAFWEMAWRG 214 (226)
T ss_dssp SCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CS---------SCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHhCCHHHHHHHHHHHHHHHhC----ch---------hHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2478999999999999999999999999997 20 135689999999999999999999864
No 13
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=100.00 E-value=6.1e-49 Score=324.37 Aligned_cols=189 Identities=20% Similarity=0.312 Sum_probs=166.6
Q ss_pred CchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026416 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
+.++++|++.++|+|+++++||| |||+++|++||+|||+||.+|+|+++++++|+|+ .+ +..++..+
T Consensus 2 ~~~~~~L~~~~~~~w~~~~~HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~-----~~-~~~~~~~~ 68 (190)
T 1wwm_A 2 GMLGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQ-----AH-RAPLVQAL 68 (190)
T ss_dssp ---------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCH-----HH-HHHHHHHH
T ss_pred chHHHHHHHhHHHHHHHHHCCCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCh-----HH-HHHHHHHH
Confidence 56899999999999999999999 9999999999999999999999999999999998 77 88998888
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHH
Q 026416 92 AGLHDEIAWFKKEASKWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPELQ 171 (239)
Q Consensus 92 ~~~~~E~~~~~~~~~~~gi~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~y~ 171 (239)
+.+.+| +++++.+||+. +.+++|+|.+||+||++++ . ++++++++|++||+|+|.+||+++.. .+++|+
T Consensus 69 ~~~~~E----~~~~~~~gi~~-~~~~~p~~~aY~~~l~~~a-~-~~~~~~~aAl~pc~~~Y~~ig~~l~~----~~~~y~ 137 (190)
T 1wwm_A 69 MATVEE----LDWLLLQGASP-SAPVHPVRAGYIALLEEMG-R-LPYAYRVVFFYFLNGLFLEAWAHHVP----EEGPWA 137 (190)
T ss_dssp HHHHHH----HHHHHTTTCCS-SSCCCHHHHHHHHHHHHHH-H-SCHHHHHHHHHHHHHHHHHHHHHHSC----SSSHHH
T ss_pred HHHHHH----HHHHHHcCCCC-CCCCCHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHHHHHHHhcc----CCcHHH
Confidence 777666 67888999997 7789999999999999995 5 89999999999999999999999764 236799
Q ss_pred HHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhc
Q 026416 172 EVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 172 ~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
+||++|+|++|.+.|+.+++++|++++..++ ++ ++++|+++|++|++||||||
T Consensus 138 ~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~---------~~---~~~~F~~a~~lE~~Fwd~a~ 190 (190)
T 1wwm_A 138 ELSQHWFAPEFQAVLYDLEVLARGLWEDLDP---------EV---VRTYLRRILEAEKATWSLLL 190 (190)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHHHHTTSCH---------HH---HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHhCCH---------HH---HHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999987776 44 99999999999999999986
No 14
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=100.00 E-value=1.7e-48 Score=335.70 Aligned_cols=203 Identities=10% Similarity=0.035 Sum_probs=181.5
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.++|+++|++.++++|+++++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++ ++++.+...
T Consensus 47 ~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~------~~~~~~~~~ 120 (258)
T 2a2m_A 47 ADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD------ETLREFFKA 120 (258)
T ss_dssp TTSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS------HHHHHHHHH
T ss_pred CchHHHHHHHhhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999998 346777777
Q ss_pred HhhHHHHHHHHHHHHHHcCCCCCC-CCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCCCCCCch
Q 026416 91 MAGLHDEIAWFKKEASKWGVELSE-TVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPDTNTPPE 169 (239)
Q Consensus 91 ~~~~~~E~~~~~~~~~~~gi~~~~-~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~~~~~~~ 169 (239)
+..+.+ ++|+++++.+||+.++ .+++|+|.+||+||++++ ..++++++++|++||+|+|.+||+++..... .+++
T Consensus 121 ~~~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a-~~g~~~~~laAl~pC~~~Y~eig~~l~~~~~-~~~~ 196 (258)
T 2a2m_A 121 KAKSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVA-GSLASPYMCVVMLPCEYLWPWIANFLDGYTP-TNSL 196 (258)
T ss_dssp HHHHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHH-HHSCTHHHHHHHHHHHHHHHHHHHHHGGGSC-TTST
T ss_pred HHHHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CCch
Confidence 765554 9999999999999765 688999999999999995 6779999999999999999999998765322 2378
Q ss_pred HHHHhh-hcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 170 LQEVCQ-RWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 170 y~~Wi~-~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
|++||+ +|+++ +.|+.+++++|++++..+ ++++.++|+++|++|++||||+|+.
T Consensus 197 Y~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~------------~~~l~~~F~~a~~lE~~Fwd~a~~~ 251 (258)
T 2a2m_A 197 YRFWIEWNGGTP---NGAYQMGNMLEQYRDKID------------EDKAVEIFNTAMNYELKVFTSSTIL 251 (258)
T ss_dssp THHHHHHHCSCC---HHHHHHHHHHHTTGGGSC------------HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhccCCH---HHHHHHHHHHHHHHhhcc------------HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999 99998 899999999999875332 5689999999999999999999975
No 15
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.6e-42 Score=297.67 Aligned_cols=219 Identities=10% Similarity=0.059 Sum_probs=181.5
Q ss_pred CcccccccccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-
Q 026416 2 EGKAKEEAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDS- 80 (239)
Q Consensus 2 ~~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~- 80 (239)
.|..-+.+..++|+++|++.++|+|+++++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++....+
T Consensus 9 ~~~~~~~~~~p~~se~L~~~~~~iw~~i~~HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~ 88 (262)
T 3oql_A 9 TGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGE 88 (262)
T ss_dssp CSCTTCGGGSCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHH
T ss_pred CCccccccCCcHHHHHHHHHhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCCh
Confidence 4677788899999999999999999999999999999999999999999999999999999999999999998732210
Q ss_pred hhHHHHHHHHHhhHHHH---HHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH
Q 026416 81 KGDTEVILGGMAGLHDE---IAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQE 154 (239)
Q Consensus 81 ~~~~~~l~~~~~~~~~E---~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~ 154 (239)
...+.++. .++..| .++|+++++.+||+.+ +.+++|+|.+||+||++++ ..++++++++|+. .|+|.+
T Consensus 89 ~~~~~~l~---~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a-~~g~l~e~lAAl~--ya~e~~ 162 (262)
T 3oql_A 89 DMARRWLM---RNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTS-SSDSLAVAMAATN--YAIEGA 162 (262)
T ss_dssp HHHHHHHH---HHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHH-HHSCHHHHHHHTT--THHHHH
T ss_pred HHHHHHHH---HHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHH-ccCCHHHHHHHHH--HHHHHH
Confidence 12333333 233333 4566789999999974 4789999999999999995 6789999999986 678999
Q ss_pred HHh---------hccCCCCCC-CchHHHHhhhcCChHHHHH-HHHHHHHHHHHHhhc-ChhhhcccCcHHHHHHHHHHHH
Q 026416 155 SFA---------HCLEPDTNT-PPELQEVCQRWGNDGFGQY-CHSLKKIANRLLEKA-SDDLIMGKAGDDVLKKAEVELI 222 (239)
Q Consensus 155 i~~---------~~~~~~~~~-~~~y~~Wi~~y~s~~f~~~-v~~l~~~ld~~~~~~-~~~~~~~~~~~~~~~~~~~~F~ 222 (239)
||+ .+......+ ++.|.+||+.|+ +|.+. +...++++|+++... ++ ++++++.++|.
T Consensus 163 ig~~s~~~~~g~~~~~~~~~~~~~~~~~w~~~h~--~~D~~H~~e~~~li~~l~~~~~~~---------~e~~~~~~a~~ 231 (262)
T 3oql_A 163 TGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHA--QYDDAHPWEALEIICTLVGNKPSL---------QLQAELRQAVT 231 (262)
T ss_dssp HHHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHHH--TCC-CHHHHHHHHHHHHHCSSCCH---------HHHHHHHHHHH
T ss_pred hhhHHHHhhhhHHHhcCCCcccChHHHHHHHHHH--HHHHHhHHHHHHHHHHHhccCCCH---------HHHHHHHHHHH
Confidence 997 332211111 346889999998 78777 999999999999766 66 88999999999
Q ss_pred HHHHHHHHhchhhcc
Q 026416 223 RVLEHEVEFWNMSRG 237 (239)
Q Consensus 223 ~~~~~E~~Fwd~a~~ 237 (239)
+++.+|+.||||||+
T Consensus 232 ~S~~~~~~fld~~y~ 246 (262)
T 3oql_A 232 KSYDYMYLFLERCIQ 246 (262)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999986
No 16
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=100.00 E-value=4.4e-35 Score=247.36 Aligned_cols=203 Identities=11% Similarity=0.105 Sum_probs=170.4
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.|+|+++|++..+ |..+++|||+++|.+||||+++|++||+|||+||.+|.++++.+++|+|+ .+.++.++..
T Consensus 5 ~m~f~~~L~~~~~--~~~~~~HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~-----~~~~~~~~~~ 77 (231)
T 1rcw_A 5 FMNFLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDD-----LEARKLLLDN 77 (231)
T ss_dssp --CHHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HhhcccCHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHH
Confidence 3679999999988 89999999999999999999999999999999999999999999999999 6777777766
Q ss_pred HhhH----HHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026416 91 MAGL----HDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEPD 163 (239)
Q Consensus 91 ~~~~----~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~~ 163 (239)
+... .+|+++|.++++.+||+.+ +.++.|+|.+|++|+++++ ..+++.++++|++++++++..+......
T Consensus 78 i~~e~~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~-~~~~~~~~laal~~~E~~~~~~~~~~~~-- 154 (231)
T 1rcw_A 78 LMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWC-TGDSLAAGVAALYSYESQIPRIAREKIR-- 154 (231)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTHHHHHHHHHH--
T ss_pred HHHhcCCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 5432 3579999999999999974 4678999999999999995 7789999999987777777766554321
Q ss_pred CCCCchHHHHhhhcCChHH-------HHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhc
Q 026416 164 TNTPPELQEVCQRWGNDGF-------GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 164 ~~~~~~y~~Wi~~y~s~~f-------~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
..++|..|++.|+.+.| .+.+..+.+++|+++. + +++++.++|++++++|++|||++|
T Consensus 155 --~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~---~----------~~~~~~~~~~~~~~le~~fwd~~~ 219 (231)
T 1rcw_A 155 --GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK---D----------DADKVLEASQEVTQSLYGFLDSFL 219 (231)
T ss_dssp --HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS---S----------CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH---H----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11235589999999999 6677899999999875 2 356899999999999999999998
Q ss_pred cC
Q 026416 237 GT 238 (239)
Q Consensus 237 ~~ 238 (239)
..
T Consensus 220 ~~ 221 (231)
T 1rcw_A 220 DP 221 (231)
T ss_dssp --
T ss_pred hc
Confidence 64
No 17
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.97 E-value=2.5e-31 Score=226.07 Aligned_cols=206 Identities=10% Similarity=0.109 Sum_probs=169.1
Q ss_pred CchH--HHHHHHcHHHHHHhhcC-HhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChh--HHHH
Q 026416 12 GGVI--DTWLRKHRLIYIGATRH-PFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKG--DTEV 86 (239)
Q Consensus 12 ~~~~--~~L~~~~~~~w~~~~~H-pFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~--~~~~ 86 (239)
|+++ ++|+++++|+|+++++| |||++|.+||||.++|++||+|||+||.+|+|+++.+++|+|+ .+ .+..
T Consensus 2 ~~~~~~~~L~~~~~~~w~~~~~h~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~-----~~~~~~~~ 76 (239)
T 3dde_A 2 MSIIDLTKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKD-----LPGKYLSF 76 (239)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSS-----CCHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----chHHHHHH
Confidence 3454 99999999999999999 9999999999999999999999999999999999999999999 45 6667
Q ss_pred HHHHHhh-HHHHHHHHHHHHHHcCCCCC---CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhccCC
Q 026416 87 ILGGMAG-LHDEIAWFKKEASKWGVELS---ETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCLEP 162 (239)
Q Consensus 87 l~~~~~~-~~~E~~~~~~~~~~~gi~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~~~ 162 (239)
+...+.. +..|..++++ ++.+|++.+ ..+|+|+|.+|++||+.++ ..+++..+++++++||++| .++..+...
T Consensus 77 ~~~~~~~e~~~e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a-~~~~~~~~la~~~~~E~~y-~~~~~~~~~ 153 (239)
T 3dde_A 77 CFHHAHEEAGHELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWIS-ATGNPVQRLGYSYWAENVY-GYIDPVLKA 153 (239)
T ss_dssp HHHHHHHHTTTHHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHH-HSSCGGGGHHHHHHHHTCH-HHHHHHHHH
T ss_pred HHHHHHHHHChHHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 7766643 3456566666 889999974 4688999999999999995 5678889999999999999 666544320
Q ss_pred ---CCCCCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhcc
Q 026416 163 ---DTNTPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRG 237 (239)
Q Consensus 163 ---~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~ 237 (239)
.-+-++....|+..++..+- +.++.+++++|+++ .++ ++.+++.+..+.++++...||+..+.
T Consensus 154 l~~~~~l~~~~~~f~~~h~~~d~-~h~~~~~~~ld~~~--~~~---------~~~~~ii~~a~~~~~l~~~~f~~l~~ 219 (239)
T 3dde_A 154 IQSTLDLTPQSMKFFIAHSKIDA-KHAEEVNEMLHEVC--KTQ---------EDVDSVVAVMENSLVLTARILDDVWK 219 (239)
T ss_dssp HHHHTTCCGGGGHHHHHHHHHHH-HHHHHHHHHHHHHC--CSH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCHHHHHHHHHHHhcch-hHHHHHHHHHHHHc--CCH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01112235699999987664 45678999999986 355 78999999999999999999998763
No 18
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=99.96 E-value=2.8e-28 Score=208.90 Aligned_cols=202 Identities=9% Similarity=0.040 Sum_probs=161.1
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.+.|+++|++..+++|. +|||+++|.+|+||+++|++|++|||+|+.+|++.++.+++|+|| .+.++.+++.
T Consensus 9 ~~~F~~~Lr~~~~~~~~---~HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d-----~e~rr~l~~n 80 (258)
T 3hlx_A 9 PQAFEEALRAKGDFYHI---HHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPD-----AQTRRKWVQR 80 (258)
T ss_dssp HHHHHHHHHHGGGGSGG---GSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHc---CChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----HHHHHHHHHH
Confidence 45799999999999995 999999999999999999999999999999999999999999999 7888999887
Q ss_pred HhhHH------HHHHHHHHHHHHcCCCCC---CCC-CchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHhhcc
Q 026416 91 MAGLH------DEIAWFKKEASKWGVELS---ETV-PQKANQVYCRFLESLMSPEVDYTVAITVFWAIEAVYQESFAHCL 160 (239)
Q Consensus 91 ~~~~~------~E~~~~~~~~~~~gi~~~---~~~-~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~~Y~~i~~~~~ 160 (239)
+.... +|+++|+++++.+||+.+ +.+ +.|+|+.|++++.+.+ .++++.++++|+++|. .-..|.+...
T Consensus 81 i~~eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a-~~~s~~e~vAA~L~E~-~~p~i~~~r~ 158 (258)
T 3hlx_A 81 ILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFA-RRACWQEAACSSLTEL-FAPQIHQSRL 158 (258)
T ss_dssp HHHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHH-HHSCHHHHHHGGGGGG-THHHHHHHHH
T ss_pred HHHHhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH-HHHHHHHHHh
Confidence 74333 689999999999999985 456 6899997777777774 5678999999987433 2223322211
Q ss_pred CCCCCCCchHHHHhhhcCChHHHHHHHHH-------HHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhch
Q 026416 161 EPDTNTPPELQEVCQRWGNDGFGQYCHSL-------KKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWN 233 (239)
Q Consensus 161 ~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l-------~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd 233 (239)
. .-+.|..||+.++-+.|...+... .+++=+ ...++ ++++++.+++..+|+.++.|||
T Consensus 159 ~----~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~--~~~t~---------e~q~~a~~a~~~~~~~lw~~lD 223 (258)
T 3hlx_A 159 D----SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKA--YCDSA---------EKQNRMLEILQFKLDILWSMLD 223 (258)
T ss_dssp H----HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHH--HCCSH---------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred h----cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHH--HcCCH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 1 113577899999888887765333 444311 12256 8899999999999999999999
Q ss_pred hhcc
Q 026416 234 MSRG 237 (239)
Q Consensus 234 ~a~~ 237 (239)
.+|.
T Consensus 224 a~~~ 227 (258)
T 3hlx_A 224 AMTM 227 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 19
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=99.88 E-value=2.6e-22 Score=178.20 Aligned_cols=203 Identities=10% Similarity=0.107 Sum_probs=154.9
Q ss_pred cCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHH
Q 026416 11 KGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGG 90 (239)
Q Consensus 11 ~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~ 90 (239)
.++|+++|++...+ ....+|||++++.+|+|+.+.|++||+|||.|+..|++.++.+++|+++ .+.+..+.+.
T Consensus 107 ~~~F~~~L~~~~~~--~~~~~HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~-----~~~r~~l~e~ 179 (332)
T 3bjd_A 107 EEDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTD-----VDEAAALARY 179 (332)
T ss_dssp HHHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCS-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh--cccccCcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-----HHHHHHHHHH
Confidence 35699999998888 7789999999999999999999999999999999999999999999999 6667777664
Q ss_pred H----hhHHHH---HHHHHHHHHHcCCCCC--CCCCchHhHHHHHHHHHhcCCCccHHHHHHHHH----HHHHHHHHHHh
Q 026416 91 M----AGLHDE---IAWFKKEASKWGVELS--ETVPQKANQVYCRFLESLMSPEVDYTVAITVFW----AIEAVYQESFA 157 (239)
Q Consensus 91 ~----~~~~~E---~~~~~~~~~~~gi~~~--~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~----~c~~~Y~~i~~ 157 (239)
+ +....| .++|.++++.+|++.+ ..+..|++..|++|+...+ ..+++.++++++. +|.|+|.++++
T Consensus 180 i~DE~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~-~~~~~~~alaal~~~E~~~p~~y~~i~~ 258 (332)
T 3bjd_A 180 LYGELGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAF-RHAEVGWGLAVFYITELVVPGNHEKLYR 258 (332)
T ss_dssp HHHHTTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHH-HCSSTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3 122334 8999999999999974 4566899999999999995 6778888888887 99999999998
Q ss_pred hccCCCC-CCC-chHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhh
Q 026416 158 HCLEPDT-NTP-PELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMS 235 (239)
Q Consensus 158 ~~~~~~~-~~~-~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a 235 (239)
.+...+. +.. +.|..||+.-....+..+ ..+++++. ++ +....+..+-.++++.++.|||..
T Consensus 259 ~l~~~g~~~~~~~yf~~HI~lD~~H~~~~~----~~ll~~~~---~~---------~~q~~~~~a~~~~l~~~~~f~D~l 322 (332)
T 3bjd_A 259 ALLQAGLSEDQAEYYKVHISLVPPRAKREW----QLIARRIP---DV---------QFQNAFLTSLSQHFRVERAYYDAI 322 (332)
T ss_dssp HHHHTTCCTTTTHHHHHHHHHCC---CTTH----HHHHTTTT---CH---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcccchHHHHHHHHhHHHHHHHH----HHHHHhCC---CH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7755322 212 567899988654332222 23455432 22 333456666666669999999987
Q ss_pred cc
Q 026416 236 RG 237 (239)
Q Consensus 236 ~~ 237 (239)
+.
T Consensus 323 ~~ 324 (332)
T 3bjd_A 323 WE 324 (332)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 20
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=99.27 E-value=1e-10 Score=97.64 Aligned_cols=182 Identities=14% Similarity=0.162 Sum_probs=125.0
Q ss_pred HhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC----CCCChhHHHHHHHHHhhHHH-------
Q 026416 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKE----SDDSKGDTEVILGGMAGLHD------- 96 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~----~~~~~~~~~~l~~~~~~~~~------- 96 (239)
.+.+|||++.++.|+. +..+.|++|-+.| +|.++-+++++++. .. ...+..+. .++.+
T Consensus 23 ~~~~hP~l~~~~~a~~--~ql~~f~~Q~s~F----~ryL~~l~~~~~~~l~~~~~--~~~~~eL~---~NL~EE~G~~d~ 91 (244)
T 3b5o_A 23 SITENPVVQMLSQASF--AQIAYVMQQYSIF----PKELVGFTELARRKALGAGW--NGVAQELQ---ENIDEEMGSTTG 91 (244)
T ss_dssp CTTTCTTGGGTTTCCH--HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTTC--HHHHHHHH---HHHHHHTTTTTT
T ss_pred hhccCHHHHHHHhccH--HHHHHHHHHHHHH----HHHHHHHHhhcccccccccc--hHHHHHHH---HHHHHHhCCCCC
Confidence 4678999999998664 4479999999966 66777777766651 00 01133333 23434
Q ss_pred ---HHHHHHHHHH-HcCCCCCCCCCchHhHHHHHHHHHhcCCCccHHHHHHHHHHHHH-------HHHHHHhhccCCCCC
Q 026416 97 ---EIAWFKKEAS-KWGVELSETVPQKANQVYCRFLESLMSPEVDYTVAITVFWAIEA-------VYQESFAHCLEPDTN 165 (239)
Q Consensus 97 ---E~~~~~~~~~-~~gi~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~l~a~~~c~~-------~Y~~i~~~~~~~~~~ 165 (239)
+-.+|+++++ .+|++++..+|.|+|..+++-|.+++ ..++..++.|+++.|. +|..|...+... .
T Consensus 92 ~~~H~~lyRr~L~~~lGld~~~~~p~~sT~~~idt~~~lc--s~d~~~aLGA~yatE~iaipe~~ly~~li~gL~~~--~ 167 (244)
T 3b5o_A 92 GISHYTLLADGLEEGLGVAVKNTMPSVATSKLLRTVLSLF--DRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEG--A 167 (244)
T ss_dssp TCCHHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--C
T ss_pred CCchHHHHHHHHHHhcCCCccccCCCchHHHHHHHHHHHh--CCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhC--C
Confidence 4579999999 99999988899999999999999996 4566777777654433 677777766432 2
Q ss_pred CCchHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhc
Q 026416 166 TPPELQEVCQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSR 236 (239)
Q Consensus 166 ~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~ 236 (239)
-+..-..+++.|....=....+.+.++++... ++ ++..++.+-+++++.....||+.-+
T Consensus 168 ~~~~~l~FF~~HidelE~~Ha~~l~~~l~~~~---~~---------eef~~~~~G~~~~Lda~~~fWdgL~ 226 (244)
T 3b5o_A 168 IPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYI---QP---------EEFGEFAAGFRAMIDAMQVWWQELA 226 (244)
T ss_dssp CCHHHHHHHHHHHC-------CHHHHHHHTTC---CG---------GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hh---------HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223467777754222445566777777643 23 4578999999999999999999743
No 21
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=98.07 E-value=0.00021 Score=60.50 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=75.7
Q ss_pred CchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026416 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|+++|.+..+..=+.+-++||+..+..|+++.+.++.||.|=|.+....-.++..+ .+ ......+..
T Consensus 2 ~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~----~~-----~p~l~~~~~-- 70 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQH----RD-----NEIISAIYF-- 70 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHT----TT-----SHHHHHHCC--
T ss_pred chHHHHHHHHHHHHHHHHHchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----cc-----Chhhhhhcc--
Confidence 4789999999999999999999999999999999999999999999988666655543 22 111111110
Q ss_pred hhHHHHHHHHHHHHHHc-CCCC-CCCCCchHhHHHHHHHHHhc
Q 026416 92 AGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 92 ~~~~~E~~~~~~~~~~~-gi~~-~~~~~~pa~~~Y~~~l~~~a 132 (239)
..+.+ ..+.++-++.+ |-+. +..+|+|++..|+.++..++
T Consensus 71 ~el~R-~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~ 112 (250)
T 1wov_A 71 PELNR-TDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIA 112 (250)
T ss_dssp GGGCC-HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHH
T ss_pred Hhhhh-HHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHh
Confidence 11111 12222223333 5443 24678899999999999874
No 22
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=97.97 E-value=0.00033 Score=57.79 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=75.8
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
+..+|+++|.+..+..=+.+-++|||..+..|.++.+.++.||.|-|.+....-.++..... .|.... . +..
T Consensus 4 ~~~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~-~p~~~~-----~--~~~ 75 (215)
T 1wzd_A 4 ATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRA-SGFAES-----L--LDP 75 (215)
T ss_dssp ---CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTSSTT-----T--SCG
T ss_pred ccHHHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-Cchhhh-----h--ccc
Confidence 45689999999999999999999999999999999999999999999999987777766432 111000 0 000
Q ss_pred HHhhHHHHHHHHHHHHHHcCCCC---CCCCCchHhHHHHHHHHHhc
Q 026416 90 GMAGLHDEIAWFKKEASKWGVEL---SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 90 ~~~~~~~E~~~~~~~~~~~gi~~---~~~~~~pa~~~Y~~~l~~~a 132 (239)
.+.+ ..+.++-++.+|.+. +..+|+|++..|++++..++
T Consensus 76 ---el~R-~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~ 117 (215)
T 1wzd_A 76 ---ALNR-AEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIR 117 (215)
T ss_dssp ---GGCC-HHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ---hhcc-HHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHh
Confidence 0000 122222233344333 24678999999999999774
No 23
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=97.89 E-value=0.00053 Score=58.45 Aligned_cols=112 Identities=13% Similarity=0.034 Sum_probs=78.3
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
+..+|+++|.+..+..=+.+-++||+..+.+|+++.+.++.||.|-|++....-.++..+.. -|- .... .+.
T Consensus 29 ~~~~~~~~Lr~~T~~~H~~~e~~~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~LE~~l~~~~~-~p~-----l~~~-~~~- 100 (264)
T 2q32_A 29 RMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKD-HPA-----FAPL-YFP- 100 (264)
T ss_dssp CTTSHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTT-----TGGG-CCH-
T ss_pred CcccHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-ChH-----hHhh-cCH-
Confidence 44579999999999999999999999999999999999999999999999887766655332 111 1000 000
Q ss_pred HHhhHHHHHHHHHHHHHHc-CCCC-CCCCCchHhHHHHHHHHHhc
Q 026416 90 GMAGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 90 ~~~~~~~E~~~~~~~~~~~-gi~~-~~~~~~pa~~~Y~~~l~~~a 132 (239)
..+.+ ..+.++-++.+ |-+. +..+|+|++..|+.++..++
T Consensus 101 --~el~R-~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 142 (264)
T 2q32_A 101 --MELHR-KEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIG 142 (264)
T ss_dssp --HHHCC-HHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHH
T ss_pred --hhhhh-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 01111 12223333334 6553 35678999999999999874
No 24
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=97.81 E-value=0.0046 Score=51.55 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=76.9
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
+..+|+++|.+.....=+.+-+.||+..+.+|+++.+.++.||.|-|.+....-.++..+.. -|. .... .+-.
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~-~p~-----~~~~-~~~~ 81 (233)
T 1n45_A 9 MPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKE-SPV-----FAPV-YFPE 81 (233)
T ss_dssp -CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-STT-----TGGG-CCHH
T ss_pred CChHHHHHHHHHHHHHHHHHHccHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc-Cch-----hhhh-cCHh
Confidence 45589999999999999999999999999999999999999999999999987766665432 111 0000 0000
Q ss_pred HHhhHHHHHHHHHHHHHHcCC-CC-CCCCCchHhHHHHHHHHHhc
Q 026416 90 GMAGLHDEIAWFKKEASKWGV-EL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 90 ~~~~~~~E~~~~~~~~~~~gi-~~-~~~~~~pa~~~Y~~~l~~~a 132 (239)
.+.+ ..+.++-++.+|- +. +..+++|++..|+.++..++
T Consensus 82 ---el~R-~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~ 122 (233)
T 1n45_A 82 ---ELHR-KAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVG 122 (233)
T ss_dssp ---HHCC-HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred ---hccc-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 0111 1222233333432 32 24678999999999999874
No 25
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=97.79 E-value=0.0012 Score=55.49 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=75.0
Q ss_pred CchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHH
Q 026416 12 GGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGM 91 (239)
Q Consensus 12 ~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~ 91 (239)
.+|+++|.+..+..=+.+-+.||+..+..|.++.+.++.||.|-|.+....-.++..... -|. ...+..
T Consensus 3 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~-~p~--------l~~~~~-- 71 (240)
T 1we1_A 3 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKD-HPI--------LSHIYF-- 71 (240)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-STT--------GGGGCC--
T ss_pred hHHHHHHHHHHHHHHHHHHCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc-Cch--------hHhhhh--
Confidence 479999999999998999999999999999999999999999999999877766665422 110 000000
Q ss_pred hhHHHHHHHHHHHHHHc-CCCC-CCCCCchHhHHHHHHHHHhc
Q 026416 92 AGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 92 ~~~~~E~~~~~~~~~~~-gi~~-~~~~~~pa~~~Y~~~l~~~a 132 (239)
..+.+ ..+.++-++.+ |-+. +..+|+|++..|+.++..++
T Consensus 72 ~el~R-~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~ 113 (240)
T 1we1_A 72 PELNR-KQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVA 113 (240)
T ss_dssp TTSCC-HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHH
T ss_pred Hhhhh-HHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHh
Confidence 00111 11222222333 5442 24578899999999999874
No 26
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=97.69 E-value=0.0034 Score=53.52 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=77.5
Q ss_pred ccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHH
Q 026416 10 GKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILG 89 (239)
Q Consensus 10 ~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~ 89 (239)
+..+|+++|....+..=+.+-+.||+..+.+|+++.+.|..||.|-|.+....-.++..+.. -|. ...+ .+-.
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~-~p~-----l~~~-~~pe 81 (267)
T 1j02_A 9 MSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQ-NPV-----YAPL-YFPE 81 (267)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTT-----TGGG-CCHH
T ss_pred CchHHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc-CcH-----HHHh-cCHh
Confidence 45589999999999998999999999999999999999999999999999887766655322 111 1110 0000
Q ss_pred HHhhHHHHHHHHHHHHHHc-CCCC-CCCCCchHhHHHHHHHHHhc
Q 026416 90 GMAGLHDEIAWFKKEASKW-GVEL-SETVPQKANQVYCRFLESLM 132 (239)
Q Consensus 90 ~~~~~~~E~~~~~~~~~~~-gi~~-~~~~~~pa~~~Y~~~l~~~a 132 (239)
.+.+ ..+.++-++.+ |-+. +..+++|++..|+.++..++
T Consensus 82 ---el~R-~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia 122 (267)
T 1j02_A 82 ---ELHR-RAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVG 122 (267)
T ss_dssp ---HHCC-HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHH
T ss_pred ---hhhh-HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHh
Confidence 1111 12223333334 6553 35688999999999999874
No 27
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=89.64 E-value=0.86 Score=36.57 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=47.3
Q ss_pred CCcccccccccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026416 1 MEGKAKEEAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAAS 68 (239)
Q Consensus 1 ~~~~~~~~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~ 68 (239)
|.-.|.+....++|+++|.+..+..=+.+-++ |+. ..|.++.+.++.||.|-|.+....-..+..
T Consensus 1 ~~~~~~~~~~~~~l~~~Lr~~T~~~H~~~e~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~ 65 (198)
T 1sk7_A 1 MDTLAPESTRQNLRSQRLNLLTNEPHQRLESL-VKS--KEPFASRDNFARFVAAQYLFQHDLEPLYRN 65 (198)
T ss_dssp -----------CCHHHHHHHHTHHHHHHHHHH-HHH--HCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCccCCCCCCchhHHHHHHHHHHHHHHHHHHH-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456666777899999999999988888888 764 789999999999999999999887766643
No 28
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=80.92 E-value=4 Score=32.90 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=47.5
Q ss_pred ccccCchHHHHHHHcHHHHHHhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026416 8 EAGKGGVIDTWLRKHRLIYIGATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAAS 68 (239)
Q Consensus 8 ~~~~~~~~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~ 68 (239)
+...++|+++|.+..+..=+.+-++ |+. ..|.++.+.++.||.|-|.+....-..+..
T Consensus 5 ~~~~~~l~~~Lr~~T~~~H~~~E~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~ 62 (209)
T 1j77_A 5 ENQALTFAKRLKADTTAVHDSVDNL-VMS--VQPFVSKENYIKFLKLQSVFHKAVDHIYKD 62 (209)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHH-HHH--TCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHh-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3446789999999999888888888 776 789999999999999999999887766543
No 29
>3ov9_A Nucleoprotein; orthogonal bundle, viral genomic encapsidation, viral protein; 1.60A {Rift valley fever virus} PDB: 3ouo_A 3lyf_A 4h5m_A 4h5o_A 4h5p_A 4h5q_A 4h6f_A 4h6g_A
Probab=50.69 E-value=84 Score=25.85 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=59.3
Q ss_pred HhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHHhh-HH---HHHHHHHH
Q 026416 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGMAG-LH---DEIAWFKK 103 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-~~---~E~~~~~~ 103 (239)
+.+=||=.-+|.+-+||.+.+.--+.-..+|+..|.|...--.-..+. .+....+-.-++. +. -+-+-.+.
T Consensus 142 r~MMh~sFagLId~~l~~e~~~~i~dAh~Lf~~~FS~tINp~~Rg~s~-----~ev~~sf~~pm~Aa~~s~f~~~eqR~~ 216 (245)
T 3ov9_A 142 RHMMHPSFAGMVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTK-----EEVAATFTQPMNAAVNSNFISHEKRRE 216 (245)
T ss_dssp GGGSSGGGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCH-----HHHHHHHHHHHHHHHTCSSSCHHHHHH
T ss_pred HHHhhchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhcCHhhccCCH-----HHHHHHHHhHHHHHHHccCCCHHHHHH
Confidence 455689899999999999999999999999999998776521111111 2223333221111 11 14466778
Q ss_pred HHHHcCCCCCCCCCchHhH
Q 026416 104 EASKWGVELSETVPQKANQ 122 (239)
Q Consensus 104 ~~~~~gi~~~~~~~~pa~~ 122 (239)
++..+||=..+..|+++..
T Consensus 217 ~L~~~gil~~n~~~~~~v~ 235 (245)
T 3ov9_A 217 FLKAFGLVDSNGKPSAAVM 235 (245)
T ss_dssp HHHHTTSBCTTSCBCHHHH
T ss_pred HHHHhCccCCCCCCcHHHH
Confidence 9999999776667766544
No 30
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=46.90 E-value=88 Score=25.89 Aligned_cols=91 Identities=15% Similarity=-0.011 Sum_probs=60.3
Q ss_pred HhhcCHhHhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHHhh-HHH---HHHHHHH
Q 026416 28 GATRHPFILAIRDGTVNYSSFKKWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGMAG-LHD---EIAWFKK 103 (239)
Q Consensus 28 ~~~~HpFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~-~~~---E~~~~~~ 103 (239)
..+=||=.-+|.+-+||.+.+.--+.-..+|+..|.|...--.-..+. .+....+-.-++. +.. ..+-.+.
T Consensus 148 ~~MMh~sFagLId~~l~~e~~~~i~~Ah~Lfl~~FsrtINp~~Rg~~~-----~Ev~~sf~~p~~Aai~S~F~~~~qR~~ 222 (253)
T 4h5l_A 148 RAMMHPSFAGIIDLDLPNGAGATIADAHGLFMIEFSKTINPSLRTKQA-----NEVAATFEKPNMAAMSGRFFTREDKKK 222 (253)
T ss_dssp GGGSSGGGGGGCCTTCGGGHHHHHHHHHHHHHHHHHHHHCGGGSSSCH-----HHHHHHHHHHHHHHHTCSSSCHHHHHH
T ss_pred HHHHhhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCHhhcCCCH-----HHHHHHhhHHHHHHHHcCCCCHHHHHH
Confidence 344588889999999999999999999999999999876543332332 2333333332221 111 2346677
Q ss_pred HHHHcCCCCCCCCCchHhHH
Q 026416 104 EASKWGVELSETVPQKANQV 123 (239)
Q Consensus 104 ~~~~~gi~~~~~~~~pa~~~ 123 (239)
+++.+||=.++.+++++..+
T Consensus 223 ~L~~~gi~~~n~~~~~~v~~ 242 (253)
T 4h5l_A 223 LLIAVGIIDEDLVLASAVVR 242 (253)
T ss_dssp HHHHTTSBCTTCCBCHHHHH
T ss_pred HHHHcCccCCCCCCcHHHHH
Confidence 99999987666666655443
No 31
>1dvk_A PRP18; PRE-mRNA splicing factor, X-RAY crystallography, RNA binding protein; 2.15A {Saccharomyces cerevisiae} SCOP: a.72.1.1
Probab=45.18 E-value=20 Score=28.10 Aligned_cols=83 Identities=11% Similarity=0.136 Sum_probs=51.4
Q ss_pred HhHhhhhcCCCCHHHHH------HHHHHHHHHHHHHHHHHHHHhhhccCCCCCChhHHHHHHHHHhhHHHHHHHHHHHHH
Q 026416 33 PFILAIRDGTVNYSSFK------KWLGQDYIFVREFVAFAASVLVKAWKESDDSKGDTEVILGGMAGLHDEIAWFKKEAS 106 (239)
Q Consensus 33 pFv~~l~~GtL~~~~f~------~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~l~~~~~~~~~E~~~~~~~~~ 106 (239)
|-+..|.+++||.+.+. +++.||.-|+++.-..+-+++.++|=+ ++.-. ...|++..+
T Consensus 67 PL~~~Lr~~~L~~dil~~L~~Iv~~~q~~r~y~~And~Yl~LaIGNA~WP-----------IGVTm-----VGIHeRsar 130 (173)
T 1dvk_A 67 PLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWP-----------IGVTS-----VGIHARSAH 130 (173)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHHTBCCCC-----------SCC----------------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCCCC-----------ceeee-----eeeehhhHH
Confidence 88999999999997654 566556999999999999999999853 22111 123333222
Q ss_pred Hc--CCC-CCCCCCchHhHHHHHHHHHh
Q 026416 107 KW--GVE-LSETVPQKANQVYCRFLESL 131 (239)
Q Consensus 107 ~~--gi~-~~~~~~~pa~~~Y~~~l~~~ 131 (239)
+- +-+ ..++--..+++.|+.-+.++
T Consensus 131 eKI~~~~~vAHImnDE~tRKyiqsiKRL 158 (173)
T 1dvk_A 131 SKIQGGRNAANIMIDERTRLWITSIKRL 158 (173)
T ss_dssp ---------CBCCCCHHHHHHHHHHHHH
T ss_pred HHHhccchhhHHhccHHHHHHHHHHHHH
Confidence 21 101 12445567888888887776
No 32
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=44.25 E-value=38 Score=26.98 Aligned_cols=49 Identities=8% Similarity=0.178 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHHHHHhchhhccC
Q 026416 183 GQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEHEVEFWNMSRGT 238 (239)
Q Consensus 183 ~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~E~~Fwd~a~~~ 238 (239)
..++.-+...+-+..++...++ +..++|..++.++|.+.+.+|..+|..
T Consensus 143 ia~i~~i~~~i~~~l~~~~~~~-------~~~~~~~~A~~K~~~l~val~~~~Y~~ 191 (195)
T 2veb_A 143 VAFIYPITATMKPFLARKGHTP-------EEVEKMYQAWFKATTLQVALWSYPYVK 191 (195)
T ss_dssp HHTHHHHHHTTHHHHTSSSCCH-------HHHHHHHHHHHHHHHHHHHHHTGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCH-------HHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 4556666666666665443211 788999999999999999999999853
No 33
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=35.35 E-value=40 Score=23.28 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=27.5
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHhh-cChhhhcccCcHHHHHHHHHHHHHHHHH
Q 026416 174 CQRWGNDGFGQYCHSLKKIANRLLEK-ASDDLIMGKAGDDVLKKAEVELIRVLEH 227 (239)
Q Consensus 174 i~~y~s~~f~~~v~~l~~~ld~~~~~-~~~~~~~~~~~~~~~~~~~~~F~~~~~~ 227 (239)
|..|+-.+|.++|..+.+. .. .++ ++...+.+.|.+.+.+
T Consensus 7 i~DYTE~EFl~fv~~i~~~-----~~~~~e---------~~~d~lv~hF~~iteH 47 (87)
T 1unk_A 7 ISDYTEAEFVQLLKEIEKE-----NVAATD---------DVLDVLLEHFVKITEH 47 (87)
T ss_dssp GGGSCHHHHHHHHHHHHHH-----HHSSCC---------HHHHHHHHHHHHHHCC
T ss_pred hhhcCHHHHHHHHHHHHhC-----CCCCCh---------hHHHHHHHHHHHhcCC
Confidence 7788888888887777544 11 233 4557888888887643
No 34
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=32.24 E-value=56 Score=22.85 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=24.9
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHH
Q 026416 174 CQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVL 225 (239)
Q Consensus 174 i~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~ 225 (239)
|..|+-.+|.++|+.+.+ +...++ ++...+.+.|.+.+
T Consensus 7 i~DyTe~Efi~lv~~I~~-----~~~~~E---------~e~d~ll~~fe~it 44 (94)
T 3u43_A 7 ISDYTEAEFLEFVKKICR-----AEGATE---------EDDNKLVREFERLT 44 (94)
T ss_dssp GGGSBHHHHHHHHHHHHH-----TCCSSH---------HHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHh-----cCCCCH---------HHHHHHHHHHHHhC
Confidence 677887777777666644 111344 66777888887776
No 35
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=30.20 E-value=1.1e+02 Score=21.66 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHHH
Q 026416 179 NDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLEH 227 (239)
Q Consensus 179 s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~ 227 (239)
...|.+...+|..+|+++-...- .++...+.|.+++.+
T Consensus 29 ~~sFEeal~eLEeIV~~LE~gel-----------~LEesl~lyeeG~~L 66 (100)
T 1vp7_A 29 PQDFETALAELESLVSAMENGTL-----------PLEQSLSAYRRGVEL 66 (100)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTCS-----------CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCC-----------CHHHHHHHHHHHHHH
Confidence 35699999999999999854322 367777788777765
No 36
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=28.95 E-value=21 Score=18.73 Aligned_cols=9 Identities=33% Similarity=0.630 Sum_probs=6.3
Q ss_pred HHHHHHHHH
Q 026416 49 KKWLGQDYI 57 (239)
Q Consensus 49 ~~YL~QD~~ 57 (239)
.-||+|||.
T Consensus 4 at~LIqdyf 12 (26)
T 2f3y_B 4 ATFLIQEYF 12 (26)
T ss_pred hhhhHHHHH
Confidence 457888864
No 37
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=24.86 E-value=39 Score=19.30 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=10.2
Q ss_pred CCCHHHHH-HHHHHHHH
Q 026416 42 TVNYSSFK-KWLGQDYI 57 (239)
Q Consensus 42 tL~~~~f~-~YL~QD~~ 57 (239)
.+.--+|. -||+|||.
T Consensus 5 evTVGKfYatfLIQdyF 21 (37)
T 2be6_D 5 EVTVGKFYATFLIQEYF 21 (37)
T ss_dssp CTTTHHHHHHHHHHHHH
T ss_pred ceeeehHHHHHHHHHHH
Confidence 34444454 79999974
No 38
>3bt5_A Uncharacterized protein DUF305; structural genomics, unknown function, PSI-2, protein structure initiative; 1.35A {Deinococcus radiodurans R1}
Probab=21.02 E-value=2.5e+02 Score=21.45 Aligned_cols=60 Identities=12% Similarity=0.144 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCC-hhHHHHHHHHH-hhHHHHHHHHHHHHHHcCCCC
Q 026416 53 GQDYIFVREFVAFAASVLVKAWKESDDS-KGDTEVILGGM-AGLHDEIAWFKKEASKWGVEL 112 (239)
Q Consensus 53 ~QD~~yl~~~~r~~a~~~~ka~~~~~~~-~~~~~~l~~~~-~~~~~E~~~~~~~~~~~gi~~ 112 (239)
.-|..|+...+.-+..++.-+......+ ..+++.|+..+ .....|+..-+.+++.+|.++
T Consensus 102 ~~D~~fl~~Mi~HH~~Ai~ma~~~~~~~~dp~vk~lA~~ii~~Q~~EI~~m~~~L~~~g~~~ 163 (177)
T 3bt5_A 102 QAERQFLRLMIRHHQGAVAMTLPMLDAAARPEVERLARQIVVTQRGEIRTMEGVLGRLDGEV 163 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3588888888877766665444321111 35677777665 455789999999999999553
No 39
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=20.79 E-value=1.8e+02 Score=20.49 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=27.3
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHhhcChhhhcccCcHHHHHHHHHHHHHHHH
Q 026416 174 CQRWGNDGFGQYCHSLKKIANRLLEKASDDLIMGKAGDDVLKKAEVELIRVLE 226 (239)
Q Consensus 174 i~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~ 226 (239)
|..|+-.+|.+++..+.+.- . ...+ +.+..+.+.|.+.+.
T Consensus 14 isDYTE~EFi~lv~~I~~~~---~-~~e~---------e~~d~Ll~hF~~ite 53 (101)
T 2k0d_X 14 ISDYTEAEFVQLLKEIEKEN---V-AATD---------DVLDVLLEHFVKITE 53 (101)
T ss_dssp GGGCBHHHHHHHHHHHHHHH---H-HTCS---------HHHHHHHHHHHHHHC
T ss_pred HHHhcHHHHHHHHHHHHhcC---C-Ccch---------HHHHHHHHHHHHcCC
Confidence 78899888888877775541 1 1122 335889999988764
No 40
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=20.73 E-value=1e+02 Score=17.74 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=19.6
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHh
Q 026416 175 QRWGNDGFGQYCHSLKKIANRLLE 198 (239)
Q Consensus 175 ~~y~s~~f~~~v~~l~~~ld~~~~ 198 (239)
....|++|.+++++--.+++|...
T Consensus 8 ~I~~S~~F~~F~~rsskviERAL~ 31 (38)
T 3l9k_W 8 MIILSENFQRFVVRAGRVIERALS 31 (38)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHc
Confidence 345789999999999999998653
Done!