Query 026423
Match_columns 238
No_of_seqs 185 out of 2491
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 13:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026423.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026423hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f8y_A Notch homolog 1, transl 100.0 3.2E-42 1.1E-46 251.3 23.1 217 4-236 2-218 (223)
2 1oy3_D Transcription factor in 100.0 4.9E-42 1.7E-46 258.6 21.1 209 26-238 7-254 (282)
3 2xai_A ASB-9, ankyrin repeat a 100.0 2.5E-41 8.4E-46 252.2 20.8 193 28-238 3-195 (261)
4 3b7b_A Euchromatic histone-lys 100.0 1.6E-40 5.3E-45 244.5 23.4 195 28-238 11-206 (237)
5 1wdy_A 2-5A-dependent ribonucl 100.0 2.1E-40 7.3E-45 249.8 24.2 231 4-238 16-282 (285)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-41 1.7E-45 249.5 20.1 213 5-233 35-247 (253)
7 2dzn_A Probable 26S proteasome 100.0 1.2E-40 4E-45 243.7 21.6 198 29-237 3-203 (228)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 1.7E-41 5.8E-46 252.0 16.9 198 27-238 9-219 (253)
9 3aji_A 26S proteasome non-ATPa 100.0 4.5E-41 1.6E-45 246.4 17.8 192 28-235 40-231 (231)
10 3aji_A 26S proteasome non-ATPa 100.0 3E-40 1E-44 242.1 21.7 195 29-238 7-201 (231)
11 1k1a_A B-cell lymphoma 3-encod 100.0 2.9E-40 9.8E-45 243.6 21.6 200 26-237 7-211 (241)
12 3d9h_A CDNA FLJ77766, highly s 100.0 2.5E-40 8.6E-45 249.7 21.3 196 25-238 56-251 (285)
13 3utm_A Tankyrase-1; tankyrase, 100.0 9E-40 3.1E-44 253.4 24.0 230 4-238 35-309 (351)
14 2rfa_A Transient receptor pote 100.0 2.4E-40 8.3E-45 242.7 19.6 206 28-236 3-224 (232)
15 3kea_A K1L; tropism, ANK repea 100.0 2.7E-40 9.2E-45 249.5 18.3 193 26-237 29-223 (285)
16 3hra_A Ankyrin repeat family p 100.0 2.1E-39 7.2E-44 232.7 20.8 191 28-232 5-201 (201)
17 4b93_B Ankyrin repeat domain-c 100.0 2.7E-40 9.2E-45 247.1 15.8 175 30-220 54-229 (269)
18 2etb_A Transient receptor pote 100.0 1.3E-39 4.3E-44 242.3 17.7 204 28-235 2-247 (256)
19 4b93_B Ankyrin repeat domain-c 100.0 1.1E-40 3.9E-45 249.1 12.0 193 30-238 14-214 (269)
20 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-39 1.2E-43 252.2 20.7 214 9-235 153-372 (373)
21 1ikn_D Protein (I-kappa-B-alph 100.0 8.4E-41 2.9E-45 245.8 10.2 201 26-236 6-211 (236)
22 1n11_A Ankyrin; clathrin, BAND 100.0 9.8E-39 3.3E-43 254.7 22.7 203 31-237 149-372 (437)
23 3b7b_A Euchromatic histone-lys 100.0 8.5E-39 2.9E-43 235.2 20.1 206 4-230 22-231 (237)
24 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-38 4.9E-43 245.7 21.7 225 4-237 36-329 (337)
25 3ljn_A Hypothetical protein; a 100.0 2.6E-39 9E-44 252.3 17.5 191 28-235 53-270 (364)
26 4gpm_A Engineered protein OR26 100.0 8.1E-39 2.8E-43 222.6 17.7 153 31-198 7-159 (169)
27 1s70_B 130 kDa myosin-binding 100.0 3E-39 1E-43 245.4 16.6 197 27-238 39-261 (299)
28 1k1a_A B-cell lymphoma 3-encod 100.0 4.2E-39 1.4E-43 237.4 16.8 192 27-233 45-240 (241)
29 2fo1_E LIN-12 protein; beta-ba 100.0 2.3E-39 7.9E-44 253.2 16.1 208 20-238 117-342 (373)
30 3ljn_A Hypothetical protein; a 100.0 8.7E-39 3E-43 249.3 17.8 206 26-237 18-239 (364)
31 2xai_A ASB-9, ankyrin repeat a 100.0 2.4E-38 8.2E-43 236.1 19.2 206 4-235 14-223 (261)
32 3d9h_A CDNA FLJ77766, highly s 100.0 1.8E-38 6.2E-43 239.5 18.0 212 4-237 70-282 (285)
33 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-37 4.4E-42 240.3 22.9 206 28-237 25-301 (337)
34 4gpm_A Engineered protein OR26 100.0 6.2E-38 2.1E-42 218.1 18.6 158 64-236 6-163 (169)
35 3eu9_A Huntingtin-interacting 100.0 8.1E-38 2.8E-42 230.2 20.3 216 4-236 20-237 (240)
36 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-37 6.1E-42 247.4 23.1 206 28-237 47-273 (437)
37 2pnn_A Transient receptor pote 100.0 2.6E-38 9E-43 237.4 15.0 207 25-233 10-257 (273)
38 3eu9_A Huntingtin-interacting 100.0 1.7E-37 5.7E-42 228.5 18.4 194 29-237 10-205 (240)
39 1wdy_A 2-5A-dependent ribonucl 100.0 7.4E-37 2.5E-41 230.4 22.3 207 28-237 5-248 (285)
40 2f8y_A Notch homolog 1, transl 100.0 4.6E-38 1.6E-42 229.2 15.1 185 39-237 2-186 (223)
41 3jxi_A Vanilloid receptor-rela 100.0 3.5E-38 1.2E-42 235.1 14.5 205 28-235 5-251 (260)
42 2dzn_A Probable 26S proteasome 100.0 4.6E-37 1.6E-41 224.7 19.5 211 4-231 13-227 (228)
43 1oy3_D Transcription factor in 100.0 5.2E-37 1.8E-41 231.1 18.7 203 4-222 20-271 (282)
44 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-36 8.4E-41 234.0 21.4 194 28-237 24-275 (351)
45 3kea_A K1L; tropism, ANK repea 100.0 3.6E-37 1.2E-41 232.4 12.3 200 4-236 42-248 (285)
46 4hbd_A KN motif and ankyrin re 100.0 8.4E-37 2.9E-41 229.3 13.9 187 31-232 79-273 (276)
47 2rfm_A Putative ankyrin repeat 100.0 2.8E-35 9.7E-40 209.7 16.9 163 56-233 29-191 (192)
48 1s70_B 130 kDa myosin-binding 100.0 6E-36 2E-40 227.3 12.7 216 4-230 51-285 (299)
49 3v30_A DNA-binding protein rfx 100.0 7.7E-35 2.6E-39 203.9 16.0 167 31-212 5-171 (172)
50 1ihb_A P18-INK4C(INK6), cyclin 100.0 5E-35 1.7E-39 202.9 14.4 158 62-234 5-162 (162)
51 3v31_A Ankyrin repeat family A 100.0 6.5E-35 2.2E-39 203.3 14.9 160 61-235 2-161 (167)
52 3v30_A DNA-binding protein rfx 100.0 9.9E-35 3.4E-39 203.3 15.7 162 62-237 2-163 (172)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.1E-34 1E-38 200.3 16.9 158 60-232 12-169 (169)
54 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.2E-34 7.6E-39 199.6 15.5 156 28-198 5-160 (162)
55 1sw6_A Regulatory protein SWI6 100.0 6.6E-35 2.2E-39 224.1 14.1 184 26-220 129-327 (327)
56 3f6q_A Integrin-linked protein 100.0 1.3E-34 4.4E-39 204.1 13.4 162 61-236 4-165 (179)
57 2rfa_A Transient receptor pote 100.0 8.5E-34 2.9E-38 207.9 18.2 167 61-236 2-185 (232)
58 2y1l_E Darpin-8.4; hydrolase-i 100.0 1E-33 3.5E-38 197.6 17.6 159 25-198 11-169 (169)
59 1ikn_D Protein (I-kappa-B-alph 100.0 3.8E-34 1.3E-38 210.3 15.1 199 4-218 19-228 (236)
60 3hra_A Ankyrin repeat family p 100.0 3.6E-33 1.2E-37 200.2 19.7 180 4-198 16-201 (201)
61 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-34 7.1E-39 200.4 12.0 160 59-233 5-164 (165)
62 1sw6_A Regulatory protein SWI6 100.0 1.3E-34 4.6E-39 222.4 11.0 184 31-238 100-312 (327)
63 3v31_A Ankyrin repeat family A 100.0 3.7E-33 1.3E-37 194.4 16.5 155 29-198 4-158 (167)
64 2rfm_A Putative ankyrin repeat 100.0 2.9E-33 1E-37 199.3 16.4 157 27-198 34-190 (192)
65 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.6E-33 1.9E-37 191.3 15.3 154 62-231 2-155 (156)
66 1awc_B Protein (GA binding pro 100.0 7.2E-33 2.5E-37 190.2 15.5 147 31-193 5-151 (153)
67 2vge_A RELA-associated inhibit 100.0 3.5E-36 1.2E-40 219.8 -1.7 200 7-228 3-207 (229)
68 1awc_B Protein (GA binding pro 100.0 4.5E-32 1.5E-36 186.2 18.1 151 62-228 2-152 (153)
69 3f6q_A Integrin-linked protein 100.0 2.1E-32 7.3E-37 192.7 14.1 163 31-209 8-171 (179)
70 2pnn_A Transient receptor pote 100.0 2.2E-32 7.5E-37 205.1 14.9 177 25-214 51-272 (273)
71 2etb_A Transient receptor pote 100.0 5.7E-32 1.9E-36 201.0 15.2 158 27-198 42-244 (256)
72 3twr_A Tankyrase-2; ankyrin re 100.0 5.1E-32 1.8E-36 188.3 13.5 157 27-198 7-163 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.6E-31 5.6E-36 184.0 15.6 152 29-197 3-155 (156)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.3E-33 7.7E-38 206.5 5.7 187 27-232 4-202 (239)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3E-32 1E-36 200.5 11.0 163 59-237 2-167 (239)
76 4hbd_A KN motif and ankyrin re 100.0 2.9E-31 1E-35 199.2 15.1 156 28-198 111-273 (276)
77 3jxi_A Vanilloid receptor-rela 100.0 1.6E-31 5.4E-36 199.1 12.5 163 26-202 44-251 (260)
78 1d9s_A Cyclin-dependent kinase 100.0 6.1E-31 2.1E-35 177.0 11.7 134 86-234 2-136 (136)
79 2vge_A RELA-associated inhibit 100.0 5.2E-32 1.8E-36 197.7 3.3 175 44-236 1-180 (229)
80 3t8k_A Uncharacterized protein 100.0 8.6E-31 2.9E-35 185.0 6.4 160 62-238 6-183 (186)
81 1bi7_B P16INK4A, MTS1, multipl 100.0 1.3E-29 4.4E-34 174.5 10.3 144 57-216 7-151 (156)
82 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.5E-28 5E-33 163.0 14.6 126 95-234 1-126 (126)
83 2aja_A Ankyrin repeat family p 100.0 3.7E-31 1.3E-35 205.5 2.0 183 29-233 93-343 (376)
84 1d9s_A Cyclin-dependent kinase 100.0 2.5E-29 8.5E-34 169.1 10.1 131 52-198 3-134 (136)
85 1bi7_B P16INK4A, MTS1, multipl 100.0 3.5E-29 1.2E-33 172.3 10.6 133 90-237 6-139 (156)
86 3t8k_A Uncharacterized protein 100.0 1E-29 3.5E-34 179.4 6.5 159 31-206 9-184 (186)
87 2jab_A H10-2-G3; HER2, darpin, 100.0 2E-28 7E-33 164.6 12.3 125 94-232 12-136 (136)
88 2aja_A Ankyrin repeat family p 100.0 1.7E-30 5.8E-35 201.8 0.5 179 31-236 68-252 (376)
89 2jab_A H10-2-G3; HER2, darpin, 100.0 1.9E-27 6.6E-32 159.8 13.0 126 59-198 11-136 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.3E-27 1.8E-31 155.5 14.3 123 62-198 2-124 (126)
91 3c5r_A BARD-1, BRCA1-associate 99.9 8.5E-28 2.9E-32 161.8 8.3 129 91-233 5-133 (137)
92 3deo_A Signal recognition part 99.9 1.6E-26 5.5E-31 163.1 11.5 140 59-231 41-181 (183)
93 3ui2_A Signal recognition part 99.9 9.5E-27 3.2E-31 171.6 10.6 141 60-233 43-184 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 5.9E-27 2E-31 157.6 7.4 128 57-198 5-132 (137)
95 2b0o_E UPLC1; arfgap, structur 99.9 4.5E-26 1.5E-30 172.6 10.8 143 59-222 148-299 (301)
96 3ehr_A Osteoclast-stimulating 99.9 1.3E-26 4.5E-31 168.5 7.4 129 94-236 71-200 (222)
97 3deo_A Signal recognition part 99.9 1.4E-25 4.7E-30 158.3 12.3 138 27-197 43-181 (183)
98 3aaa_C Myotrophin, protein V-1 99.9 5.9E-26 2E-30 149.9 9.6 111 94-218 5-115 (123)
99 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-25 3.7E-30 170.5 11.6 133 95-235 150-285 (301)
100 3ui2_A Signal recognition part 99.9 1.6E-25 5.5E-30 165.0 12.1 139 27-198 44-183 (244)
101 3ehr_A Osteoclast-stimulating 99.9 5.9E-26 2E-30 165.1 7.6 137 58-209 69-206 (222)
102 1dcq_A PYK2-associated protein 99.9 3.3E-25 1.1E-29 166.1 11.6 132 96-235 130-264 (278)
103 3aaa_C Myotrophin, protein V-1 99.9 3E-25 1E-29 146.4 9.5 111 59-183 4-114 (123)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-24 5.3E-29 135.8 10.4 93 140-234 1-93 (93)
105 3lvq_E ARF-GAP with SH3 domain 99.9 6.2E-24 2.1E-28 171.6 13.7 133 97-237 133-268 (497)
106 3jue_A Arfgap with coiled-coil 99.9 6.1E-24 2.1E-28 164.5 12.3 163 60-236 197-366 (368)
107 3jue_A Arfgap with coiled-coil 99.9 2.1E-23 7.3E-28 161.4 11.7 127 94-234 197-326 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.9 4.9E-23 1.7E-27 166.4 14.1 129 62-205 132-269 (497)
109 1dcq_A PYK2-associated protein 99.9 1.5E-22 5E-27 151.7 14.6 147 40-199 108-262 (278)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.3E-22 7.9E-27 125.9 11.9 91 95-198 1-91 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.9 7.7E-23 2.6E-27 133.2 8.8 109 91-213 4-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.9 4.9E-23 1.7E-27 134.2 7.2 100 136-237 4-103 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.5E-20 8.7E-25 120.2 9.4 94 133-228 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 4.8E-19 1.6E-23 114.2 10.2 92 90-194 18-109 (110)
115 3mkq_B Coatomer subunit alpha; 61.7 35 0.0012 23.2 7.3 131 30-198 10-141 (177)
116 1gp8_A Protein (scaffolding pr 53.3 12 0.0004 18.0 2.1 19 31-49 16-34 (40)
117 3zrh_A Ubiquitin thioesterase 50.5 29 0.001 27.1 5.0 26 138-163 66-91 (454)
118 3zrh_A Ubiquitin thioesterase 46.1 43 0.0015 26.2 5.3 49 35-83 29-90 (454)
119 3mkq_B Coatomer subunit alpha; 21.4 2E+02 0.0067 19.5 7.6 98 33-163 42-140 (177)
No 1
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.2e-42 Score=251.27 Aligned_cols=217 Identities=18% Similarity=0.164 Sum_probs=193.4
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++.+++++.++... ++.......+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCC-CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35566666655433 233333345666899999999999999999999999 8889999999999999999999999998
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK 163 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 163 (238)
..+..++.++..|.||||+|+..++.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN------------AVDDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc------------CcCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 7777889999999999999999999999999999987754 5788999999999999999999999999
Q ss_pred CCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 164 DRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 164 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+.+++.+++++|+++|+..+
T Consensus 148 g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 148 GANK-DMQNNREETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9988 788999999999999999999999999999 9999999999999999999999999999999998754
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.9e-42 Score=258.64 Aligned_cols=209 Identities=20% Similarity=0.230 Sum_probs=185.5
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHhhhhc---cccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAGRMQN---IFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHI 102 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~ 102 (238)
..+.||||+|+..|+.+++++|+++|.+ + +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~ 84 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL-DLQNDLGQTALHLAAILGEASTVEKLY-AAGAGVLVAERGGHTALHL 84 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGG-GCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccc-cccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHH
Confidence 4455699999999999999999999988 5 788899999999999999999999999 5778889999999999999
Q ss_pred HHHhCCHHHHHHHHhhCccccCCCCC-----------------------------------CCcccccccCCCCCcHHHH
Q 026423 103 AARVGDPAIVSTILKYAPAITNGTES-----------------------------------EPESLLRITDDEGNTPLHN 147 (238)
Q Consensus 103 a~~~~~~~~~~~ll~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~ 147 (238)
|+..++.+++++|+++++........ .....++..+..|.||||+
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 164 (282)
T 1oy3_D 85 ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164 (282)
T ss_dssp HTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHH
T ss_pred HHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHH
Confidence 99999999999999988653221110 0123366788899999999
Q ss_pred HHHcCCHHHHHHHHHcCCccccccC-CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhH
Q 026423 148 AVRNKHENVVRMLVKKDRIPLGYLN-NAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPM 226 (238)
Q Consensus 148 a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 226 (238)
|+..|+.+++++|++.|+++ +..+ ..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.+++.++++
T Consensus 165 A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 165 AVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 99999999999999999998 5555 45999999999999999999999998 999999999999999999999999999
Q ss_pred HhhhcccccCCC
Q 026423 227 IFISLNKCLSIV 238 (238)
Q Consensus 227 ~L~~~g~~~~~~ 238 (238)
+|+++|++++.+
T Consensus 243 ~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 243 LLRAHGAPEPED 254 (282)
T ss_dssp HHHHTTCCCCCC
T ss_pred HHHHcCCCcCcC
Confidence 999999999863
No 3
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=252.23 Aligned_cols=193 Identities=13% Similarity=0.123 Sum_probs=168.9
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
+.||||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcC
Confidence 345899999999999999999999998 888889999999999999999999999 467788888999999999999999
Q ss_pred CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCc
Q 026423 108 DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSL 187 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 187 (238)
+.+++++|+++|+++. .+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+
T Consensus 81 ~~~~v~~Ll~~g~~~~-------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQ-------------PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp CHHHHHHHHHTTCCSS-------------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCC-------------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCC
Confidence 9999999999887653 2345889999999999999999999999887 7788899999999999999
Q ss_pred HHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 188 TDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 188 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.+++++|++.| ++++. +..|.||||+|+..++.+++++|+++|++++.+
T Consensus 147 ~~~v~~Ll~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~ 195 (261)
T 2xai_A 147 RACVKKLLESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAK 195 (261)
T ss_dssp HHHHHHHHHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 99999999988 88885 788999999999999999999999999988753
No 4
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.6e-40 Score=244.48 Aligned_cols=195 Identities=23% Similarity=0.256 Sum_probs=181.4
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
+.+|||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcC
Confidence 445899999999999999999999999 888999999999999999999999999 677788899999999999999999
Q ss_pred CHHHHHHHHhhC-ccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcC
Q 026423 108 DPAIVSTILKYA-PAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSS 186 (238)
Q Consensus 108 ~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 186 (238)
+.+++++|++++ .+ ++..+..|.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..|
T Consensus 89 ~~~~~~~Ll~~~~~~------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMD------------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSG 155 (237)
T ss_dssp CHHHHHHHHTTTCCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHC
T ss_pred CHHHHHHHHhCCCCC------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCC
Confidence 999999999988 33 2357788999999999999999999999999988 788999999999999999
Q ss_pred cHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 187 LTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 187 ~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
+.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|++++++
T Consensus 156 ~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 156 CVDIAEILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206 (237)
T ss_dssp CHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred CHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence 999999999999 999999999999999999999999999999999998763
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-40 Score=249.83 Aligned_cols=231 Identities=13% Similarity=0.110 Sum_probs=194.9
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++++++++.++.. .+++......+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+
T Consensus 16 g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll- 92 (285)
T 1wdy_A 16 EDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFL- 92 (285)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHH-
T ss_pred CCHHHHHHHHHcC-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHH-
Confidence 4566666655443 2233333445566899999999999999999999998 888899999999999999999999999
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCC----------CCC----------------------c
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTE----------SEP----------------------E 131 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~----------~~~----------------------~ 131 (238)
..+.+++.++..|.||||+|+..|+.+++++|+++++++..... .+. .
T Consensus 93 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 172 (285)
T 1wdy_A 93 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 172 (285)
T ss_dssp HTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSC
T ss_pred HcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcC
Confidence 56777888899999999999999999999999999887654321 110 3
Q ss_pred ccccccCCCCCcHHHHHHHcCC----HHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCC
Q 026423 132 SLLRITDDEGNTPLHNAVRNKH----ENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLP 207 (238)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 207 (238)
..++..+..|.||||+|+..++ .+++++|++.|+++ +..+..|.||||+|++.|+.+++++|++..+++++.+|.
T Consensus 173 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~ 251 (285)
T 1wdy_A 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 251 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT
T ss_pred CCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC
Confidence 3456678889999999999999 89999999999988 788999999999999999999999999944499999999
Q ss_pred CCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 208 EELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 208 ~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.|.||||+|+..++.+++++|+++|++++.+
T Consensus 252 ~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 252 DGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999999999864
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5e-41 Score=249.48 Aligned_cols=213 Identities=18% Similarity=0.158 Sum_probs=181.0
Q ss_pred hhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHc
Q 026423 5 SFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRR 84 (238)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~ 84 (238)
+.+++++.++.... ........+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.
T Consensus 35 ~~~~v~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 112 (253)
T 1yyh_A 35 APAVISDFIYQGAS-LHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRN 112 (253)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHS
T ss_pred ChHHHHHHHHccCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45666665544322 22222345666899999999999999999999999 88899999999999999999999999977
Q ss_pred CccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 026423 85 RDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKD 164 (238)
Q Consensus 85 ~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~ 164 (238)
++.+++.++..|.||||+|+..++.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|++.|
T Consensus 113 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 180 (253)
T 1yyh_A 113 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN------------AVDDLGKSALHWAAAVNNVDAAVVLLKNG 180 (253)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT------------CBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 776889999999999999999999999999999987754 57889999999999999999999999999
Q ss_pred CccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccc
Q 026423 165 RIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNK 233 (238)
Q Consensus 165 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~ 233 (238)
+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+.+|+.+++++|.+...
T Consensus 181 a~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 181 ANK-DMQNNREETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp CCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred CCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 998 788999999999999999999999999999 9999999999999999999999999999987644
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-40 Score=243.74 Aligned_cols=198 Identities=18% Similarity=0.234 Sum_probs=179.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCc-ccccc-CCCCCCcHHHHHHHh
Q 026423 29 DHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRD-SLLRK-NNWKGETPLHIAARV 106 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~-~~~~~-~~~~g~~~l~~a~~~ 106 (238)
.+|||.|+..|+.+++++|++.+.++....+..|.||||+|+..|+.+++++|++.+. .+++. .+..|.||||+|+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 4589999999999999999999998866689999999999999999999999996541 44444 788999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcC
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSS 186 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 186 (238)
|+.+++++|++++.... ++..+..|.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..|
T Consensus 83 ~~~~~~~~Ll~~g~~~~----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPD----------LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp CCHHHHHHHHSSSSCCC----------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcc----------cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcC
Confidence 99999999999883221 3357888999999999999999999999999988 788999999999999999
Q ss_pred cHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhh-hcccccCC
Q 026423 187 LTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFI-SLNKCLSI 237 (238)
Q Consensus 187 ~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~-~~g~~~~~ 237 (238)
+.+++++|++.|+++++.+|..|+||||+|+..++.+++++|+ ++|+++++
T Consensus 152 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 9999999999998899999999999999999999999999999 99999875
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.7e-41 Score=252.03 Aligned_cols=198 Identities=18% Similarity=0.201 Sum_probs=157.0
Q ss_pred CCCHHHHHHHHcC-------------CHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCC
Q 026423 27 TMDHELLNVLRRG-------------DEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNN 93 (238)
Q Consensus 27 ~~~~~l~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 93 (238)
.+.||||+|+..| +.+++++|+++|.++....+..|.||||+|+..|+.+++++|+ ..+.+++.++
T Consensus 9 ~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~ 87 (253)
T 1yyh_A 9 DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQD 87 (253)
T ss_dssp -------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCC
T ss_pred CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCC
Confidence 4556999999987 8999999999999996667899999999999999999999999 5678889999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCC
Q 026423 94 WKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNN 173 (238)
Q Consensus 94 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 173 (238)
..|.||||+|+..++.+++++|++++... ++..+..|.||||+|+..++.+++++|++.|+++ +..+.
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~ 155 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATD-----------LDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDD 155 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSC-----------TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCC
Confidence 99999999999999999999999988521 2367889999999999999999999999999988 78899
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 174 AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 174 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|++++++
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 219 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT 219 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc
Confidence 9999999999999999999999999 999999999999999999999999999999999998863
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.5e-41 Score=246.43 Aligned_cols=192 Identities=19% Similarity=0.185 Sum_probs=136.2
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 444677777777777777777777776 666677777777777777777777777 355566666777777777777777
Q ss_pred CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCc
Q 026423 108 DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSL 187 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 187 (238)
+.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+
T Consensus 118 ~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 118 RHEIAVMLLEGGANPD------------AKDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp CHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCC------------CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCC
Confidence 7777777777665533 45566777777777777777777777777766 5666777777777777777
Q ss_pred HHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 188 TDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 188 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
.+++++|+++| ++++.+|..|.||+++|+..++.+++++|.++|+++
T Consensus 185 ~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 185 VEEAKFLVTQG-ASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHTT-CCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 77777777776 777777777777777777777777777777777654
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3e-40 Score=242.07 Aligned_cols=195 Identities=19% Similarity=0.243 Sum_probs=182.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCC
Q 026423 29 DHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGD 108 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 108 (238)
.++|+.|+..|+.+.+++|++.+....+..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 348999999999999999999887765888999999999999999999999999 4677889999999999999999999
Q ss_pred HHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcH
Q 026423 109 PAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLT 188 (238)
Q Consensus 109 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 188 (238)
.+++++|+++++++. ..+..|.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..|+.
T Consensus 86 ~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 86 DEIVKALLVKGAHVN------------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp HHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCH
Confidence 999999999987754 57789999999999999999999999999988 78899999999999999999
Q ss_pred HHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 189 DIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 189 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|++++++
T Consensus 153 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 201 (231)
T 3aji_A 153 KMVHILLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIE 201 (231)
T ss_dssp HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHHHHHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence 9999999998 999999999999999999999999999999999998763
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.9e-40 Score=243.59 Aligned_cols=200 Identities=18% Similarity=0.210 Sum_probs=178.7
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHh----hhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAG----RMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLH 101 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~ 101 (238)
..+.+|||+|+..|+.+++++|++ .|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAH 84 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHH
Confidence 345568999999999999999997 67787 888999999999999999999999999 577788889999999999
Q ss_pred HHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccC-CCCCCHHH
Q 026423 102 IAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLN-NAEQTPLS 180 (238)
Q Consensus 102 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~ 180 (238)
+|+..++.+++++|++.++... ..++..+..|.||||+|+..|+.+++++|++.|+++ +..+ ..|.||||
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~ 155 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGT--------LDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLI 155 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTS--------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCcc--------ccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHH
Confidence 9999999999999999986321 123467889999999999999999999999999988 5555 78999999
Q ss_pred HHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 181 IAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 181 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 156 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 999999999999999998 99999999999999999999999999999999999875
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=249.70 Aligned_cols=196 Identities=14% Similarity=0.130 Sum_probs=180.5
Q ss_pred CCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHH
Q 026423 25 PTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAA 104 (238)
Q Consensus 25 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~ 104 (238)
...+.+|||+|+..|+.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHH
Confidence 344566899999999999999999999998 889999999999999999999999999 567888999999999999999
Q ss_pred HhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHH
Q 026423 105 RVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAID 184 (238)
Q Consensus 105 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 184 (238)
..|+.+++++|+++++++. .+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+.
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~-------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQ-------------PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACE 199 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSS-------------CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHH
T ss_pred HcCHHHHHHHHHHCCCCCC-------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 9999999999999987754 2345999999999999999999999999988 7889999999999999
Q ss_pred cCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 185 SSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 185 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.|+.+++++|++.| ++++. +..|.||||+|+..++.+++++|+++|++++.+
T Consensus 200 ~~~~~~v~~Ll~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 251 (285)
T 3d9h_A 200 NQQRACVKKLLESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251 (285)
T ss_dssp TTCHHHHHHHHHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCcHHHHHHHHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 99999999999998 88884 889999999999999999999999999998763
No 13
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9e-40 Score=253.37 Aligned_cols=230 Identities=18% Similarity=0.119 Sum_probs=195.5
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++.+.+++.+.....+++..+ ..+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+
T Consensus 35 g~~~~v~~ll~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll- 111 (351)
T 3utm_A 35 GNEEKLMALLTPLNVNCHASD-GRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLL- 111 (351)
T ss_dssp TCHHHHHHHCCTTTTTCCCSS-TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-
T ss_pred CCHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHH-
Confidence 445555554443333333332 33556899999999999999999999999 888999999999999999999999999
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcc-------------------------------
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPES------------------------------- 132 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~------------------------------- 132 (238)
..+.+++..+..|.||||+|+..|+.+++++|+++|+++......+...
T Consensus 112 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
T 3utm_A 112 KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADL 191 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccH
Confidence 5678889999999999999999999999999999998765443322110
Q ss_pred -----------cccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 133 -----------LLRITDDEGNTPLHNAVRN---KHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 133 -----------~~~~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
.....+..+.||||+|+.. +..+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.|
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 192 AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp HHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 1112457789999999998 5589999999999998 788999999999999999999999999999
Q ss_pred CcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 199 PESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 199 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
++++.+|..|+||||+|+..++.+++++|+++|++++++
T Consensus 271 -a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 309 (351)
T 3utm_A 271 -AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII 309 (351)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred -CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999999999999999998863
No 14
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-40 Score=242.73 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=178.4
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhh-hhccccccCCCCchHHHHHHHcCCcchHHHHHHcCcccc----ccCCCCCCcHHHH
Q 026423 28 MDHELLNVLRRGDEHQISLIAGR-MQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLL----RKNNWKGETPLHI 102 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~----~~~~~~g~~~l~~ 102 (238)
+.+|||.|+..|+.+++++|++. |.++ +..+..|.||||+|+..|+.+++++|++.+.... +.++..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 45589999999999999999998 8998 8889999999999999999999999996544322 5667789999999
Q ss_pred HHHhCCHHHHHHHHhhCccccCCCCCC-CcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHH
Q 026423 103 AARVGDPAIVSTILKYAPAITNGTESE-PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSI 181 (238)
Q Consensus 103 a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 181 (238)
|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHH
Confidence 999999999999999998865432110 01122334568999999999999999999999999988 7899999999999
Q ss_pred HHHcCcHHHH----HHHHhcCCccc------ccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 182 AIDSSLTDIA----CFIIDQRPESL------NHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 182 a~~~~~~~~~----~~Ll~~~~~~~------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
|+..|+.+++ ++|++.| ++. +.+|..|+||||+|+..|+.+++++|+++|+...
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 9999999988 9999999 665 6889999999999999999999999999997653
No 15
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.7e-40 Score=249.48 Aligned_cols=193 Identities=13% Similarity=0.094 Sum_probs=177.3
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAAR 105 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~ 105 (238)
..+.+|||+|+..|+.+++++|+++|+++ +.. +|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+.
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHHHH
Confidence 34556899999999999999999999998 555 5999999999999999999999 5678889999999999999999
Q ss_pred hCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHH
Q 026423 106 VGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG-NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAID 184 (238)
Q Consensus 106 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 184 (238)
.|+.+++++|+++|+++. ..+..| .||||+|+..|+.+++++|++.|++... ...|.||||+|+.
T Consensus 105 ~g~~~~v~~Ll~~ga~~~------------~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~ 170 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLM------------FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIK 170 (285)
T ss_dssp TTCHHHHHHHHHHCGGGG------------GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCC------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHH
Confidence 999999999999998865 577788 7999999999999999999999987621 1289999999999
Q ss_pred cCcHHHHHHHHhcCCcccccCCCCCCcH-HHHHHHhcCcchhHHhhhcccccCC
Q 026423 185 SSLTDIACFIIDQRPESLNHRLPEELTL-LHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 185 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
.|+.+++++|+++| ++++.+|..|+|| ||+|+..++.+++++|+++|++++.
T Consensus 171 ~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 171 NGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp TTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred cChHHHHHHHHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999998 9999999999998 9999999999999999999999986
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.1e-39 Score=232.68 Aligned_cols=191 Identities=19% Similarity=0.237 Sum_probs=174.8
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhh-ccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQ-NIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
..++|+.|+..|+.+.++.|+..+. ++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHc
Confidence 3448999999999999999999887 77 888999999999999999999999999 56788899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcC
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSS 186 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 186 (238)
|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|++.|....+..+..|.||||+|+..+
T Consensus 83 ~~~~~~~~Ll~~~~~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 83 GRTEILAYMLKHATP-----------DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp TCHHHHHHHHHHSCC-----------CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred CCHHHHHHHHhccCc-----------ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 999999999965432 133678899999999999999999999999994444889999999999999988
Q ss_pred c-----HHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcc
Q 026423 187 L-----TDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLN 232 (238)
Q Consensus 187 ~-----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g 232 (238)
. .+++++|++.| ++++.+|..|.|||++|+..++.+++++|+++|
T Consensus 152 ~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred cchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 7 99999999999 999999999999999999999999999999987
No 17
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=247.12 Aligned_cols=175 Identities=21% Similarity=0.249 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCHH-HHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCC
Q 026423 30 HELLNVLRRGDEH-QISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGD 108 (238)
Q Consensus 30 ~~l~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 108 (238)
+||+.|+..+..+ ++++|++.|+++ +..+.+|.||||+|+..|+.+++++|+ ..+.+++.++..|.||+++|+..++
T Consensus 54 t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~~a~~~~~~~~g~t~l~~a~~~~~ 131 (269)
T 4b93_B 54 HPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLL-KHGANAGARNADQAVPLHLACQQGH 131 (269)
T ss_dssp ---------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHH-hcCCCcCccCCCCCCccccccccCh
Confidence 3444444444332 444444445554 444455555555555555555555555 2334444444455555555555555
Q ss_pred HHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcH
Q 026423 109 PAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLT 188 (238)
Q Consensus 109 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 188 (238)
.+++++|++.|+++. .++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.
T Consensus 132 ~~~~~~Ll~~g~~~n------------~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 132 FQVVKCLLDSNAKPN------------KKDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp HHHHHHHHHTTCCSC------------CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCH
T ss_pred HHHHHHHHHCCCCCC------------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCH
Confidence 555555555444322 34444555555555555555555555555544 44455555555555555555
Q ss_pred HHHHHHHhcCCcccccCCCCCCcHHHHHHHhc
Q 026423 189 DIACFIIDQRPESLNHRLPEELTLLHSAVMRQ 220 (238)
Q Consensus 189 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 220 (238)
+++++|+++| ++++.+|..|+||||+|++++
T Consensus 199 ~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 199 FVVELLLLHG-ASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHHHHTT-CCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHHHHHHCC-CCCCCcCCCCCCHHHHHHhCC
Confidence 5555555554 555555555555555554443
No 18
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.3e-39 Score=242.33 Aligned_cols=204 Identities=16% Similarity=0.096 Sum_probs=172.7
Q ss_pred CCHHHHHHHHcCCHH----HHHHHHhhhhccccc----cCCCCchHHHHHHHc---CCcchHHHHHHcCcccccc-----
Q 026423 28 MDHELLNVLRRGDEH----QISLIAGRMQNIFST----MSPRGNTVLHMAIRF---RNHKVIPEILRRRDSLLRK----- 91 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~----~v~~Ll~~~~~~~~~----~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~----- 91 (238)
+.++||.|+..|+.+ ++++|++.|.++ +. .+..|.||||+|+.. |+.+++++|++ .+.+.+.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~-~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQ-IDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHH-HHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHh-cCCcccchhhhc
Confidence 457999999999997 667777899998 66 799999999999999 99999999995 4444332
Q ss_pred ------CCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCC-cccccccCCCCCcHHHHHHHcCCHHHHHHHHH--
Q 026423 92 ------NNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEP-ESLLRITDDEGNTPLHNAVRNKHENVVRMLVK-- 162 (238)
Q Consensus 92 ------~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-- 162 (238)
++..|.||||+|+..|+.+++++|+++|+++........ ....+..+..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 346799999999999999999999999988653221100 00011122349999999999999999999999
Q ss_pred -cCCccccccCCCCCCHHHHHHH--cCcHH-------HHHHHHhcCCccc-------ccCCCCCCcHHHHHHHhcCcchh
Q 026423 163 -KDRIPLGYLNNAEQTPLSIAID--SSLTD-------IACFIIDQRPESL-------NHRLPEELTLLHSAVMRQNYGEP 225 (238)
Q Consensus 163 -~~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~-------~~~~~~g~t~l~~A~~~~~~~~~ 225 (238)
.|+++ +..|..|+||||+|+. .++.+ ++++|++.| +++ +.+|..|+||||+|+..|+.+++
T Consensus 160 ~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 160 HQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp SCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence 89988 7899999999999998 78888 999999999 999 89999999999999999999999
Q ss_pred HHhhhccccc
Q 026423 226 MIFISLNKCL 235 (238)
Q Consensus 226 ~~L~~~g~~~ 235 (238)
++|+++|++.
T Consensus 238 ~~Ll~~g~~~ 247 (256)
T 2etb_A 238 RHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhCCCCC
Confidence 9999999764
No 19
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=249.14 Aligned_cols=193 Identities=18% Similarity=0.240 Sum_probs=147.2
Q ss_pred HHHHHHHHcCCHHHHHHHHhhhhcc-------ccccCCCCchHHHHHHHcCCcc-hHHHHHHcCccccccCCCCCCcHHH
Q 026423 30 HELLNVLRRGDEHQISLIAGRMQNI-------FSTMSPRGNTVLHMAIRFRNHK-VIPEILRRRDSLLRKNNWKGETPLH 101 (238)
Q Consensus 30 ~~l~~A~~~~~~~~v~~Ll~~~~~~-------~~~~~~~g~t~L~~a~~~~~~~-~~~~Ll~~~~~~~~~~~~~g~~~l~ 101 (238)
+.+.-+... +.++|++|++.|.+. .+..+..|.|||++|+..+..+ +++.|+ ..+.+++.++..|+||||
T Consensus 14 ~L~~A~~~G-~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll-~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 14 KLLRAVADG-DLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP-ASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHTT-CHHHHHHHHTCC-----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHH-HCCCCCCCcCCCCCCHHH
Confidence 345555555 589999999988753 2556778999999999877764 677777 678889999999999999
Q ss_pred HHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHH
Q 026423 102 IAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSI 181 (238)
Q Consensus 102 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 181 (238)
+|+..|+.+++++|++.++++. ..+..|.||+++|+..++.+++++|++.|+++ +..|..|.||||+
T Consensus 92 ~A~~~g~~~~v~~Ll~~~a~~~------------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~ 158 (269)
T 4b93_B 92 VAALHGRADLIPLLLKHGANAG------------ARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIY 158 (269)
T ss_dssp HHHHTTCTTHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHH
T ss_pred HHHHcCcHHHHHHHHhcCCCcC------------ccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHH
Confidence 9999999999999999997754 57788999999999999999999999999988 7889999999999
Q ss_pred HHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 182 AIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 182 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
|+..|+.+++++|++.| ++++.++..|+||||+|+..|+.+++++|+++|++++++
T Consensus 159 A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 159 ACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp HHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999 999999999999999999999999999999999999863
No 20
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-39 Score=252.20 Aligned_cols=214 Identities=15% Similarity=0.161 Sum_probs=186.5
Q ss_pred hhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCc--
Q 026423 9 TEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRD-- 86 (238)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~-- 86 (238)
++.|++++..+..+ .||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++...
T Consensus 153 l~~ga~vn~~d~~g------~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 225 (373)
T 2fo1_E 153 IAAGADVNAMDCDE------NTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLK 225 (373)
T ss_dssp HHTCCCTTCCCTTS------CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH
T ss_pred HhcCCCCcCCCCCC------CCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc
Confidence 35677776665443 44999999999999999999999999 8889999999999999999999999995432
Q ss_pred cccccCCCCCCcHHHHHHHhC---CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026423 87 SLLRKNNWKGETPLHIAARVG---DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK 163 (238)
Q Consensus 87 ~~~~~~~~~g~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 163 (238)
.+++..+..|.||||+|+..+ +.+++++|+++|+++.... ....+..+..|.||||+|+..|+.+++++|++.
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~----~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 301 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG----AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 301 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS----GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccc----ccccCcccccCCCHHHHHHHhCCHHHHHHHHHh
Confidence 688889999999999999998 8999999999998765311 111234677899999999999999999999988
Q ss_pred C-CccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 164 D-RIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 164 ~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
+ +++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+.+|+.+++++|+++|++.
T Consensus 302 ~~~~~-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 302 KGSNK-DKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp SCCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred cCCCc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 7 555 889999999999999999999999999998 999999999999999999999999999999999874
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=8.4e-41 Score=245.83 Aligned_cols=201 Identities=17% Similarity=0.152 Sum_probs=179.5
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHhhhh----ccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAGRMQ----NIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLH 101 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~ 101 (238)
..+.+|||+|+..|+.+++++|++.+. ++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQPEIAEALL-GAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCC-CCCCTTCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCCTTCCCHHH
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHh-hccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHH
Confidence 345568999999999999999999876 46 888999999999999999999999999 678889999999999999
Q ss_pred HHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCC-CCCCHHH
Q 026423 102 IAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNN-AEQTPLS 180 (238)
Q Consensus 102 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~l~ 180 (238)
+|+..|+.+++++|++.++.... ...++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHL------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALH 156 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSS------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHH
T ss_pred HHHHcCCHHHHHHHHhcccchhH------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHH
Confidence 99999999999999999865321 1234567889999999999999999999999999998 66776 9999999
Q ss_pred HHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 181 IAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 181 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
+|+..|+.+++++|+++| ++++.+|..|.|||++|+.+++.+++++|+++|++..
T Consensus 157 ~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 999999999999999998 9999999999999999999999999999999999754
No 22
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.8e-39 Score=254.71 Aligned_cols=203 Identities=20% Similarity=0.297 Sum_probs=138.3
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHH
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPA 110 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 110 (238)
|||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..++.+++++|+ ..+..++..+..|.||||+|+..++.+
T Consensus 149 ~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 226 (437)
T 1n11_A 149 PLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLL-PRGGSPHSPAWNGYTPLHIAAKQNQVE 226 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHG-GGTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 455555555555555555555554 444445555555555555555555555 233334444444455555555555555
Q ss_pred HHHHHHhhCccccCCCCCCC---------------------cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCcccc
Q 026423 111 IVSTILKYAPAITNGTESEP---------------------ESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLG 169 (238)
Q Consensus 111 ~~~~ll~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 169 (238)
++++|+++++++......+. ...++..+..|.||||+|++.|+.+++++|+++|+++ +
T Consensus 227 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~ 305 (437)
T 1n11_A 227 VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV-D 305 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-T
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccC-C
Confidence 55555544443322221110 1123457788899999999999999999999998887 7
Q ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 170 YLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 170 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQ-ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 78889999999999999999999999988 89999999999999999999999999999999998875
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.5e-39 Score=235.22 Aligned_cols=206 Identities=16% Similarity=0.178 Sum_probs=183.7
Q ss_pred chhhhhhhc----cccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHH
Q 026423 4 RSFEMTEFG----TDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIP 79 (238)
Q Consensus 4 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~ 79 (238)
++.+++++. ++++..+ ..+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.++++
T Consensus 22 g~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~ 94 (237)
T 3b7b_A 22 GHVDICHMLVQAGANIDTCS------EDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQ 94 (237)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHcCCCcCccC------CCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHH
Confidence 445666554 4444333 23445899999999999999999999998 888999999999999999999999
Q ss_pred HHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHH
Q 026423 80 EILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRM 159 (238)
Q Consensus 80 ~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 159 (238)
+|++.++.+++..+..|.||||+|+..++.+++++|+++|+++. ..+..|.||||+|+..|+.+++++
T Consensus 95 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 95 YLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN------------IRDNEENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------------ccCCCCCCHHHHHHHCCCHHHHHH
Confidence 99976668889999999999999999999999999999997754 578899999999999999999999
Q ss_pred HHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhh
Q 026423 160 LVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFIS 230 (238)
Q Consensus 160 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 230 (238)
|++.|+++ +..+..|.||||+|++.|+.+++++|+++| ++++.+|..|.||+++|+..++.+.+..|++
T Consensus 163 Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 163 LLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLSRD-SDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHHcC-CCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999988 788999999999999999999999999999 9999999999999999999999877766654
No 24
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.4e-38 Score=245.67 Aligned_cols=225 Identities=16% Similarity=0.155 Sum_probs=160.4
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccc----------------------------
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIF---------------------------- 55 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~---------------------------- 55 (238)
++.+++++.++.. .+++..+...+.||||+|+..|+.++|++|+++|+++.
T Consensus 36 g~~~~V~~LL~~G-advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (337)
T 4g8k_A 36 EDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSK 114 (337)
T ss_dssp TCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred CCHHHHHHHHHCC-CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhc
Confidence 4455555543321 12222233345568999999999999999998877541
Q ss_pred ----cccCCCCchHHHHHHHcCCcchHHHHHHcCccccc----------cCCCCCCcHHHHHHHhCCHHHHHHHHhh-Cc
Q 026423 56 ----STMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLR----------KNNWKGETPLHIAARVGDPAIVSTILKY-AP 120 (238)
Q Consensus 56 ----~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~----------~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~ 120 (238)
+..+..|.||||+|+..|+.+++++|++ .+.+++ ..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 115 ~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~-~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~ga 193 (337)
T 4g8k_A 115 GADVNECDFYGFTAFMEAAVYGKVKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 193 (337)
T ss_dssp TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCC
T ss_pred cchhhhhccCCCCHHHHHHHcCcHHHHHHHHH-cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Confidence 3456678889999999999999998885 443333 3445688999999999999999999964 66
Q ss_pred cccCCCCCCC-------------------------cccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCccccccCCC
Q 026423 121 AITNGTESEP-------------------------ESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK-DRIPLGYLNNA 174 (238)
Q Consensus 121 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~ 174 (238)
++......+. ...++.++..|.||||+|+..|+.+++++|+.. |+++ +..|..
T Consensus 194 d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v-n~~d~~ 272 (337)
T 4g8k_A 194 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSD 272 (337)
T ss_dssp CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT-TCBCTT
T ss_pred CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc-cCcCCC
Confidence 6654333221 223456677788888888888888888888875 4444 777888
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 175 EQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 175 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
|+||||+|++.|+.+++++|+++| ++++. .+||++|+..++.+++++|+++||++|+
T Consensus 273 G~TpL~~A~~~g~~~iv~~Ll~~G-Ad~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 273 GKTALLLAVELKLKKIAELLCKRG-ASTDC-----GDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHTTS-CSSTT-----CCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC-CCCCC-----CCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 888888888888888888888887 76654 3588888888888888888888888774
No 25
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.6e-39 Score=252.25 Aligned_cols=191 Identities=16% Similarity=0.167 Sum_probs=162.8
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcC---cccccc-------------
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRR---DSLLRK------------- 91 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~---~~~~~~------------- 91 (238)
+.+|||+|+..|+.+++++|+++|.++ + +..|.||||+|+..|+.+++++|++.. +..++.
T Consensus 53 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (364)
T 3ljn_A 53 GCTALHLACKFGCVDTAKYLASVGEVH-S--LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEI 129 (364)
T ss_dssp CCCHHHHHHHHCCHHHHHHHHHHCCCC-C--CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEE
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCc-c--ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhh
Confidence 344788888888888888888888865 2 346888888888888888888888541 333343
Q ss_pred ----CCCCCCcHHHHHHHhC--CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 026423 92 ----NNWKGETPLHIAARVG--DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDR 165 (238)
Q Consensus 92 ----~~~~g~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 165 (238)
.+..|.||||+|+..| +.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|++.|+
T Consensus 130 ~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 197 (364)
T 3ljn_A 130 GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT------------AKDKADETPLMRAMEFRNREALDLMMDTVP 197 (364)
T ss_dssp TTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCS
T ss_pred ccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc------------ccCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 6778899999999999 8999999999887754 578889999999999999999999999988
Q ss_pred c-----cccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 166 I-----PLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 166 ~-----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
+ + +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 198 ~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 198 SKSSLRL-DYANKQGNSHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CSSSCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred ccccccc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 8 5 788899999999999999999999999998 999999999999999999999999999999998775
No 26
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.1e-39 Score=222.59 Aligned_cols=153 Identities=23% Similarity=0.410 Sum_probs=78.6
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHH
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPA 110 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 110 (238)
.|+.||+.|+.++|+.|+++|+++ +..+..|.||||+|+..++.+++++|+ ..+.+++.++..|+||||+|+..|+.+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHH
Confidence 455555555555555555555555 555555555555555555555555555 344444555555555555555555555
Q ss_pred HHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHH
Q 026423 111 IVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDI 190 (238)
Q Consensus 111 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 190 (238)
++++|+++|+++. .++..|+||||+|++.|+.+++++|++.|+++ +..|..|+|||++|++.|+.++
T Consensus 85 ~v~~Ll~~gadvn------------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 85 VVKLLISKGADVN------------AKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHCcCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHH
Confidence 5555555544422 34444444444444444444444444444444 3444444444444444444444
Q ss_pred HHHHHhcC
Q 026423 191 ACFIIDQR 198 (238)
Q Consensus 191 ~~~Ll~~~ 198 (238)
+++|+++|
T Consensus 152 v~~Ll~~G 159 (169)
T 4gpm_A 152 VKLLEKQG 159 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHCC
Confidence 44444444
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3e-39 Score=245.45 Aligned_cols=197 Identities=20% Similarity=0.205 Sum_probs=175.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
.+.++|+.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHc
Confidence 4567899999999999999999999999 888999999999999999999999999 57788899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCc-------------------
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK-DRI------------------- 166 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~------------------- 166 (238)
|+.+++++|+++|+++. ..+..|.||||+|+..++.+++++++.. +.+
T Consensus 117 g~~~~v~~Ll~~g~~~~------------~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVG------------AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQW 184 (299)
T ss_dssp TCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCC------------CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHH
Confidence 99999999999997754 5778899999999999988888877653 222
Q ss_pred ------cccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 167 ------PLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 167 ------~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.....+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++++++
T Consensus 185 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261 (299)
T ss_dssp HHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc
Confidence 22234578999999999999999999999998 999999999999999999999999999999999998763
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.2e-39 Score=237.35 Aligned_cols=192 Identities=18% Similarity=0.154 Sum_probs=173.2
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCc---cccccCCCCCCcHHHHH
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRD---SLLRKNNWKGETPLHIA 103 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~---~~~~~~~~~g~~~l~~a 103 (238)
.+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++... .+++..+..|.||||+|
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 123 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 123 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence 3455899999999999999999999999 8889999999999999999999999996554 26788899999999999
Q ss_pred HHhCCHHHHHHHHhhCccccCCCCCCCcccccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHH
Q 026423 104 ARVGDPAIVSTILKYAPAITNGTESEPESLLRITD-DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIA 182 (238)
Q Consensus 104 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 182 (238)
+..++.+++++|+++++++. ..+ ..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|
T Consensus 124 ~~~~~~~~~~~Ll~~g~~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 124 VNTECQETVQLLLERGADID------------AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSA 190 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTT------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcc------------cccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 99999999999999997754 345 68999999999999999999999999998 78899999999999
Q ss_pred HHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccc
Q 026423 183 IDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNK 233 (238)
Q Consensus 183 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~ 233 (238)
+..|+.+++++|+++| ++++.+|..|.||+++|+.+++.++++.|.+.++
T Consensus 191 ~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 191 SGRGLLPLVRTLVRSG-ADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHTCHHHHHHHHHTT-CCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHcCCHHHHHHHHhcC-CCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 9999999999999999 9999999999999999999999999999998875
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-39 Score=253.18 Aligned_cols=208 Identities=16% Similarity=0.125 Sum_probs=183.3
Q ss_pred CCCCCCCCCCHHHHHHHHcCCHHHHHHHH--------hhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCcccccc
Q 026423 20 MDQELPTTMDHELLNVLRRGDEHQISLIA--------GRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRK 91 (238)
Q Consensus 20 ~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll--------~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~ 91 (238)
++..+...+.||||+|+..|+.+++++|+ +.|+++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.
T Consensus 117 ~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~ 194 (373)
T 2fo1_E 117 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLM-KAGADPTI 194 (373)
T ss_dssp TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCC
T ss_pred ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHH-HCCCCCcc
Confidence 33344455677999999999998888776 789999 889999999999999999999999999 56788899
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCccc
Q 026423 92 NNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNK---HENVVRMLVKKDRIPL 168 (238)
Q Consensus 92 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~---~~~~~~~ll~~~~~~~ 168 (238)
++..|.||||+|+..|+.+++++|++++... ..++..+..|.||||+|+..+ +.+++++|++.|+++.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---------~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~ 265 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLK---------GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 265 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH---------HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccc---------cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc
Confidence 9999999999999999999999999977210 113367889999999999988 8999999999998873
Q ss_pred c-------ccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 169 G-------YLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 169 ~-------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
. ..+..|.||||+|+..|+.+++++|++.++++++.+|..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 266 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 266 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp CCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCC
T ss_pred cccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCC
Confidence 2 256789999999999999999999999887999999999999999999999999999999999998753
No 30
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.7e-39 Score=249.33 Aligned_cols=206 Identities=17% Similarity=0.233 Sum_probs=179.5
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAAR 105 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~ 105 (238)
..+.++||+|+..|+.++|++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+. . ..+..|.||||+|+.
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~--~~~~~g~t~L~~A~~ 93 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGE-V--HSLWHGQKPIHLAVM 93 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-C--CCCBTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-C--ccccCCCCHHHHHHH
Confidence 34567999999999999999999999999 8899999999999999999999999996554 3 334579999999999
Q ss_pred hCCHHHHHHHHhh----CccccCC-----CCCCCcccccccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCccccccCCC
Q 026423 106 VGDPAIVSTILKY----APAITNG-----TESEPESLLRITDDEGNTPLHNAVRNK--HENVVRMLVKKDRIPLGYLNNA 174 (238)
Q Consensus 106 ~~~~~~~~~ll~~----~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~ 174 (238)
.|+.+++++|++. +..+... .........+..+..|.||||+|+..| +.+++++|++.|+++ +..+..
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~ 172 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKA 172 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTT
T ss_pred cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCC
Confidence 9999999999998 5443210 000001123347778999999999999 999999999999998 788999
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCcc-----cccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 175 EQTPLSIAIDSSLTDIACFIIDQRPES-----LNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 175 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
|.||||+|+..|+.+++++|++.| ++ ++..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999998 77 999999999999999999999999999999999986
No 31
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=236.05 Aligned_cols=206 Identities=15% Similarity=0.128 Sum_probs=178.5
Q ss_pred chhhhhhhc----cccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHH
Q 026423 4 RSFEMTEFG----TDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIP 79 (238)
Q Consensus 4 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~ 79 (238)
++.+++++. ++++..+. .+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.++++
T Consensus 14 g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~ 86 (261)
T 2xai_A 14 GHQLSLRNLISQGWAVNIITA------DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVN 86 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCCCT------TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHH
Confidence 445555554 44444332 3455899999999999999999999999 888999999999999999999999
Q ss_pred HHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHH
Q 026423 80 EILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRM 159 (238)
Q Consensus 80 ~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 159 (238)
+|++ .+.+++. +..|.||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+..|+.+++++
T Consensus 87 ~Ll~-~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 87 LLLQ-HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID------------HKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHH-TTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHH-CCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC------------cCCCCCCCHHHHHHHhCCHHHHHH
Confidence 9995 5555554 4469999999999999999999999997754 578899999999999999999999
Q ss_pred HHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 160 LVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 160 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
|++.|+++ + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||+++|+.. .+++++|++.+...
T Consensus 153 Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 153 LLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPP 223 (261)
T ss_dssp HHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCC
T ss_pred HHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCc
Confidence 99999988 4 3889999999999999999999999998 99999999999999999954 46999999987754
No 32
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=239.53 Aligned_cols=212 Identities=14% Similarity=0.155 Sum_probs=177.9
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++.+++++.++.. .+++.. ...+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++
T Consensus 70 g~~~~v~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (285)
T 3d9h_A 70 GHQLSLRNLISQG-WAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQ 146 (285)
T ss_dssp TCHHHHHHHHHTT-CCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCC-CCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHH
Confidence 4556666544432 112222 223455899999999999999999999999 8889999999999999999999999995
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK 163 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 163 (238)
.+.+++..+ .|.||||+|+..|+.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.
T Consensus 147 -~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 147 -HGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNID------------HKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp -TTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred -CCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC------------CcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 555555544 59999999999999999999999997754 5788999999999999999999999999
Q ss_pred CCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhc-ccccCC
Q 026423 164 DRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISL-NKCLSI 237 (238)
Q Consensus 164 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-g~~~~~ 237 (238)
|+++ + .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+|||++|+ ++.+++++|+++ |+++..
T Consensus 213 ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 213 GADV-N-QGKGQDSPLHAVVRTASEELACLLMDFG-ADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp TCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred CCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 9988 4 4889999999999999999999999998 999999999999999999 567999999999 887753
No 33
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-37 Score=240.34 Aligned_cols=206 Identities=17% Similarity=0.186 Sum_probs=168.3
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccC-CCCchHHHHHHHcCCcchHHHHHHcCc--------------------
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMS-PRGNTVLHMAIRFRNHKVIPEILRRRD-------------------- 86 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~a~~~~~~~~~~~Ll~~~~-------------------- 86 (238)
+.++|+.|++.|++++|++|+++|+++ +..+ ..|.||||+|+..|+.+++++|++.+.
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 467899999999999999999999999 6655 459999999999999999999996332
Q ss_pred ------------cccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCH
Q 026423 87 ------------SLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHE 154 (238)
Q Consensus 87 ------------~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 154 (238)
.+++..+..|.||+|+|+..|+.+++++++++|+++...... .......+..|.||||+|++.|+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~--~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT--KEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC--C-----CTTCSCCHHHHHHHHTCH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcc--ccccccccCCCCcHHHHHHHCCCH
Confidence 234567788999999999999999999999999876533221 122234455677777777777777
Q ss_pred HHHHHHHH--------------------------------------cCCccccccCCCCCCHHHHHHHcCcHHHHHHHHh
Q 026423 155 NVVRMLVK--------------------------------------KDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIID 196 (238)
Q Consensus 155 ~~~~~ll~--------------------------------------~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 196 (238)
+++++|++ +|+++ +.++..|.||||+|+..|+.+++++|++
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 76666664 33333 4556678999999999999999999999
Q ss_pred cCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 197 QRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 197 ~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
.++++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 261 ~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 261 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 86699999999999999999999999999999999999985
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.2e-38 Score=218.13 Aligned_cols=158 Identities=23% Similarity=0.320 Sum_probs=146.4
Q ss_pred hHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCc
Q 026423 64 TVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNT 143 (238)
Q Consensus 64 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (238)
++|+.||+.|+.++|++|+ ..+.+++.++..|.||||+|+..++.+++++|++.|+++. .++..|.|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~------------~~d~~g~T 72 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN------------AKDSDGRT 72 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTTSCC
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh------------hhccCCCC
Confidence 4799999999999999999 5778899999999999999999999999999999998754 67889999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcc
Q 026423 144 PLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYG 223 (238)
Q Consensus 144 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 223 (238)
|||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++.| ++++.+|..|+|||++|+.+|+.+
T Consensus 73 pLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 73 PLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999998 789999999999999999999999999999 999999999999999999999999
Q ss_pred hhHHhhhcccccC
Q 026423 224 EPMIFISLNKCLS 236 (238)
Q Consensus 224 ~~~~L~~~g~~~~ 236 (238)
++++|+++||+++
T Consensus 151 iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 151 VVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHTC-----
T ss_pred HHHHHHHCCCCcC
Confidence 9999999999986
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=230.15 Aligned_cols=216 Identities=15% Similarity=0.107 Sum_probs=180.0
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++++++++.++.. .+++..+ ..+.+|||.|+..|+.+++++|++.|.++....+..|.||||+|+..|+.+++++|+
T Consensus 20 g~~~~~~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll- 96 (240)
T 3eu9_A 20 GIYERCRELVEAG-YDVRQPD-KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM- 96 (240)
T ss_dssp TCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-
T ss_pred CChHHHHHHHHcC-CCcCCCC-CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-
Confidence 4556666544432 1122222 234558999999999999999999999885555666999999999999999999999
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCC-HHHHHHHHH
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-ENVVRMLVK 162 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~ll~ 162 (238)
..+.+++.++..|.||||+|+..++.+++++|+++++++. ..+..|.||||+|+..++ .+++++|++
T Consensus 97 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~------------~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 97 KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD------------MMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc------------ccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 5677788889999999999999999999999999987654 577899999999996666 889999999
Q ss_pred cCCccccccCC-CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 163 KDRIPLGYLNN-AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 163 ~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
.|+++ +..+. .|.||||+|+..|+.+++++|+++| ++++.++..|.||+++|+..++.+++++|+++|++..
T Consensus 165 ~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 165 FNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLEAG-ANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred cCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99988 55555 8999999999999999999999999 9999999999999999999999999999999998754
No 36
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-37 Score=247.41 Aligned_cols=206 Identities=22% Similarity=0.263 Sum_probs=136.7
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus 47 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g 124 (437)
T 1n11_A 47 VETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREG 124 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcC
Confidence 344788888888888888888888887 7777788888888888888888888884 56666777777888888888888
Q ss_pred CHHHHHHHHhhCccccCCCCCCC---------------------cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCc
Q 026423 108 DPAIVSTILKYAPAITNGTESEP---------------------ESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRI 166 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 166 (238)
+.+++++|+++++........+. ...++..+..|.||||+|+..++.+++++|++.|++
T Consensus 125 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 204 (437)
T 1n11_A 125 HVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204 (437)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred CHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 88888888877765443222111 112334445556666666666666666666666555
Q ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 167 PLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 167 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
+ +..+..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..|+.+++++|+++|+++++
T Consensus 205 ~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 273 (437)
T 1n11_A 205 P-HSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL 273 (437)
T ss_dssp S-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred C-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC
Confidence 5 445555666666666666666666666665 55666666666666666666666666666666666543
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.6e-38 Score=237.37 Aligned_cols=207 Identities=15% Similarity=0.143 Sum_probs=171.1
Q ss_pred CCCCCHHHHHHHHcCCHHHHHHHHhhhh----ccc---cccCCCCchHHHHHHHc---CCcchHHHHHHcCccc------
Q 026423 25 PTTMDHELLNVLRRGDEHQISLIAGRMQ----NIF---STMSPRGNTVLHMAIRF---RNHKVIPEILRRRDSL------ 88 (238)
Q Consensus 25 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~~----~~~---~~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~------ 88 (238)
...+.++||.|+..|+.++|+.|++.+. ++. ...+..|.||||+|+.. |+.+++++|++.+...
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 4456779999999999999999998654 331 13478999999999986 9999999999653321
Q ss_pred ccc----CCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCC--cccccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 026423 89 LRK----NNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEP--ESLLRITDDEGNTPLHNAVRNKHENVVRMLVK 162 (238)
Q Consensus 89 ~~~----~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~ 162 (238)
++. .+..|.||||+|+..|+.+++++|+++|+++........ .......+..|.||||+|+..|+.+++++|++
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 222 567899999999999999999999999988654221100 00112223479999999999999999999999
Q ss_pred ---cCCccccccCCCCCCHHHHHHHcCc---------HHHHHHHHhcCCcccc-------cCCCCCCcHHHHHHHhcCcc
Q 026423 163 ---KDRIPLGYLNNAEQTPLSIAIDSSL---------TDIACFIIDQRPESLN-------HRLPEELTLLHSAVMRQNYG 223 (238)
Q Consensus 163 ---~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~-------~~~~~g~t~l~~A~~~~~~~ 223 (238)
.|+++ +..+..|+||||+|+..|+ .+++++|++.| ++++ .+|..|+||||+|+..|+.+
T Consensus 170 ~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 170 NSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp CSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 88888 7899999999999999888 89999999999 8886 58999999999999999999
Q ss_pred hhHHhhhccc
Q 026423 224 EPMIFISLNK 233 (238)
Q Consensus 224 ~~~~L~~~g~ 233 (238)
++++|+++|+
T Consensus 248 iv~~Ll~~ga 257 (273)
T 2pnn_A 248 VLAYILQREI 257 (273)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHCCC
Confidence 9999999999
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=228.46 Aligned_cols=194 Identities=19% Similarity=0.216 Sum_probs=177.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCC
Q 026423 29 DHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGD 108 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 108 (238)
.++|+.|+..|+.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 34799999999999999999999998 88899999999999999999999999976665555566669999999999999
Q ss_pred HHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCc-
Q 026423 109 PAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSL- 187 (238)
Q Consensus 109 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~- 187 (238)
.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..+.
T Consensus 89 ~~~v~~Ll~~g~~~~------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 89 LSMVVQLMKYGADPS------------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp HHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCCCc------------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCCh
Confidence 999999999987754 56788999999999999999999999999988 7889999999999997665
Q ss_pred HHHHHHHHhcCCcccccCCC-CCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 188 TDIACFIIDQRPESLNHRLP-EELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 188 ~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
.+++++|++.+ ++++..+. .|.||||+|+..++.+++++|+++|++++.
T Consensus 156 ~~~~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 156 VDPTRLLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp STTHHHHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 89999999999 99999987 899999999999999999999999999875
No 39
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.4e-37 Score=230.45 Aligned_cols=207 Identities=19% Similarity=0.201 Sum_probs=158.3
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
+.++|+.|+..|+.+++++|++.|.++....+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcC
Confidence 3568999999999999999999999993334888999999999999999999999 567788899999999999999999
Q ss_pred CHHHHHHHHhhCccccCCCCCCC---------------------ccccccc----------CCCCCcHHHHHHHcCCHHH
Q 026423 108 DPAIVSTILKYAPAITNGTESEP---------------------ESLLRIT----------DDEGNTPLHNAVRNKHENV 156 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~---------------------~~~~~~~----------~~~~~~~l~~a~~~~~~~~ 156 (238)
+.+++++|+++|+++......+. ...++.. +..|.||||+|+..|+.++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 163 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence 99999999999987654332221 1111111 4556677777777777777
Q ss_pred HHHHHHc-CCccccccCCCCCCHHHHHHHcCc----HHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhh-
Q 026423 157 VRMLVKK-DRIPLGYLNNAEQTPLSIAIDSSL----TDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFIS- 230 (238)
Q Consensus 157 ~~~ll~~-~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~- 230 (238)
+++|++. |+++ +..+..|.||||+|+..++ .+++++|++.| ++++.++..|.||||+|+..++.+++++|++
T Consensus 164 v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 241 (285)
T 1wdy_A 164 LKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241 (285)
T ss_dssp HHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS
T ss_pred HHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 7777765 5555 5666677777777777666 67777777776 6777777777777777777777777777777
Q ss_pred cccccCC
Q 026423 231 LNKCLSI 237 (238)
Q Consensus 231 ~g~~~~~ 237 (238)
.|++++.
T Consensus 242 ~g~~~~~ 248 (285)
T 1wdy_A 242 EHIEIND 248 (285)
T ss_dssp SSCCTTC
T ss_pred cCCCccc
Confidence 6776654
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.6e-38 Score=229.25 Aligned_cols=185 Identities=18% Similarity=0.220 Sum_probs=169.4
Q ss_pred CCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhh
Q 026423 39 GDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKY 118 (238)
Q Consensus 39 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~ 118 (238)
|+.+++++|+++|.++....+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 67888999999999995556899999999999999999999999 56778899999999999999999999999999998
Q ss_pred CccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 119 APAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
++.. ++..+..|.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.|
T Consensus 81 ~~~~-----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 81 RATD-----------LDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148 (223)
T ss_dssp TTSC-----------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCC-----------cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 7522 2357789999999999999999999999999988 788999999999999999999999999998
Q ss_pred CcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 199 PESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 199 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
++++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 149 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 149 -ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp -CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred -CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999875
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=3.5e-38 Score=235.07 Aligned_cols=205 Identities=17% Similarity=0.150 Sum_probs=169.2
Q ss_pred CCHHHHHHHHcCCHHHHHHHHh----hhhccccccC----CCCchHHHHHH---HcCCcchHHHHHHcCc----------
Q 026423 28 MDHELLNVLRRGDEHQISLIAG----RMQNIFSTMS----PRGNTVLHMAI---RFRNHKVIPEILRRRD---------- 86 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~----~~g~t~L~~a~---~~~~~~~~~~Ll~~~~---------- 86 (238)
+.++||.|+..|+.+.++.|++ .|.++ +..+ ..|.||||+|+ ..|+.+++++|++.+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 4568999999999996555554 88887 5444 77999999999 6799999999996432
Q ss_pred cccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCC--CcccccccCCCCCcHHHHHHHcCCHHHHHHHHH--
Q 026423 87 SLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESE--PESLLRITDDEGNTPLHNAVRNKHENVVRMLVK-- 162 (238)
Q Consensus 87 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-- 162 (238)
...+..+..|.||||+|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2234455689999999999999999999999998865322100 000111222689999999999999999999999
Q ss_pred -cCCccccccCCCCCCHHHHHHHcCc---------HHHHHHHHhcCCccc-------ccCCCCCCcHHHHHHHhcCcchh
Q 026423 163 -KDRIPLGYLNNAEQTPLSIAIDSSL---------TDIACFIIDQRPESL-------NHRLPEELTLLHSAVMRQNYGEP 225 (238)
Q Consensus 163 -~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~~g~t~l~~A~~~~~~~~~ 225 (238)
.|+++ +..|..|+||||+|+..++ .+++++|++.| +++ +.+|..|+||||+|+..|+.+++
T Consensus 164 ~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 164 HKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp SCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCCHHHH
Confidence 88888 7899999999999998877 79999999999 888 77999999999999999999999
Q ss_pred HHhhhccccc
Q 026423 226 MIFISLNKCL 235 (238)
Q Consensus 226 ~~L~~~g~~~ 235 (238)
++|+++|++.
T Consensus 242 ~~Ll~~g~~~ 251 (260)
T 3jxi_A 242 QHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhCCCc
Confidence 9999999764
No 42
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.6e-37 Score=224.65 Aligned_cols=211 Identities=17% Similarity=0.141 Sum_probs=178.0
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhh--hccccccCCCCchHHHHHHHcCCcchHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRM--QNIFSTMSPRGNTVLHMAIRFRNHKVIPEI 81 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L 81 (238)
++.+++++.++....... .....+.+|||+|+..|+.+++++|+++| .++....+..|.||||+|+..|+.+++++|
T Consensus 13 g~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 91 (228)
T 2dzn_A 13 NEFFKVQELLHSKPSLLL-QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91 (228)
T ss_dssp TCHHHHHHHHHHCGGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred CCHHHHHHHHhcCccccc-cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 455666665444322222 12344566899999999999999999999 666232788999999999999999999999
Q ss_pred HHcC-ccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHH
Q 026423 82 LRRR-DSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRML 160 (238)
Q Consensus 82 l~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l 160 (238)
++.+ ..+++..+..|.||||+|+..++.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|
T Consensus 92 l~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 92 YDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR------------IKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc------------ccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9543 27788899999999999999999999999999987754 5788999999999999999999999
Q ss_pred HHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHH-hcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhc
Q 026423 161 VKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFII-DQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISL 231 (238)
Q Consensus 161 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 231 (238)
++.|....+..+..|.||||+|+..|+.+++++|+ +.| ++++.+|..|.||+++|+.. +++++|+++
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g-a~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG-AEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-CCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC-CCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 99994444889999999999999999999999999 777 99999999999999999654 778888764
No 43
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.2e-37 Score=231.12 Aligned_cols=203 Identities=21% Similarity=0.243 Sum_probs=159.8
Q ss_pred chhhhhhhccccCCCC--CCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHH
Q 026423 4 RSFEMTEFGTDYKEPT--MDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEI 81 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L 81 (238)
++.+++++.++..... ++. ....+.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|
T Consensus 20 g~~~~v~~Ll~~g~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~L 97 (282)
T 1oy3_D 20 QHEPFLDFLLGFSAGHEYLDL-QNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVL 97 (282)
T ss_dssp TCHHHHHHHHHHHTTSGGGGC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHH
T ss_pred CCHHHHHHHHhcCCCcccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhh
Confidence 4566666654332210 111 2234556899999999999999999999999 88899999999999999999999999
Q ss_pred HHcCc----------------------------------------------cccccCCCCCCcHHHHHHHhCCHHHHHHH
Q 026423 82 LRRRD----------------------------------------------SLLRKNNWKGETPLHIAARVGDPAIVSTI 115 (238)
Q Consensus 82 l~~~~----------------------------------------------~~~~~~~~~g~~~l~~a~~~~~~~~~~~l 115 (238)
++... ..++.++..|.||||+|+..|+.+++++|
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 177 (282)
T 1oy3_D 98 LQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177 (282)
T ss_dssp SSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHH
Confidence 95332 23667888999999999999999999999
Q ss_pred HhhCccccCCCCCCCcccccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHH
Q 026423 116 LKYAPAITNGTESEPESLLRITD-DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFI 194 (238)
Q Consensus 116 l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 194 (238)
+++|+++. ..+ ..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|
T Consensus 178 l~~g~~~~------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~L 244 (282)
T 1oy3_D 178 RDAGADLN------------KPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLL 244 (282)
T ss_dssp HHHTCCTT------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred HHcCCCCC------------CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHH
Confidence 99998765 344 35999999999999999999999999998 78999999999999999999999999
Q ss_pred HhcCCcccccCCCCCCcHHHHHHHhcCc
Q 026423 195 IDQRPESLNHRLPEELTLLHSAVMRQNY 222 (238)
Q Consensus 195 l~~~~~~~~~~~~~g~t~l~~A~~~~~~ 222 (238)
+++| ++++.++..|.||+++|....+.
T Consensus 245 l~~g-a~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 245 RAHG-APEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHTT-CCCCCCC----------------
T ss_pred HHcC-CCcCcCCCcccccccccCCcccc
Confidence 9999 99999999999999999876543
No 44
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.5e-36 Score=234.05 Aligned_cols=194 Identities=21% Similarity=0.294 Sum_probs=176.9
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhh-hhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 28 MDHELLNVLRRGDEHQISLIAGR-MQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
+.++|+.|+..|+.+.++.|+.. +.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNC-HASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCSSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHC
Confidence 34589999999999999999986 6777 888999999999999999999999999 56788899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccc----------------
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY---------------- 170 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~---------------- 170 (238)
|+.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|+++|+++ +.
T Consensus 102 g~~~iv~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~ 168 (351)
T 3utm_A 102 GHYEVTELLLKHGACVN------------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPE 168 (351)
T ss_dssp TCHHHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHH
T ss_pred CCHHHHHHHHHCCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhh
Confidence 99999999999997754 57789999999999999999999999999876 33
Q ss_pred --------------------------------------cCCCCCCHHHHHHHc---CcHHHHHHHHhcCCcccccCCCCC
Q 026423 171 --------------------------------------LNNAEQTPLSIAIDS---SLTDIACFIIDQRPESLNHRLPEE 209 (238)
Q Consensus 171 --------------------------------------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g 209 (238)
.+..|.||||+|+.. +..+++++|++.| ++++.++..|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g 247 (351)
T 3utm_A 169 LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDF 247 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTC
T ss_pred hHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCC
Confidence 235678999999998 6689999999999 9999999999
Q ss_pred CcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 210 LTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 210 ~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
.||||+|+..|+.+++++|+++|++++.
T Consensus 248 ~t~L~~A~~~g~~~~v~~Ll~~ga~~n~ 275 (351)
T 3utm_A 248 MTPLHVAAERAHNDVMEVLHKHGAKMNA 275 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999985
No 45
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.6e-37 Score=232.42 Aligned_cols=200 Identities=16% Similarity=0.125 Sum_probs=177.3
Q ss_pred chhhhhhh----ccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHH
Q 026423 4 RSFEMTEF----GTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIP 79 (238)
Q Consensus 4 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~ 79 (238)
++.+++++ |++++.. .+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.++++
T Consensus 42 g~~~~v~~Ll~~g~~~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~ 112 (285)
T 3kea_A 42 NNVRLVCTLLNAGALKNLL--------ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVK 112 (285)
T ss_dssp TCHHHHHHHHHTTGGGSCC--------TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCC--------CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHH
Confidence 44555555 4554444 1456999999999999999999999999 888999999999999999999999
Q ss_pred HHHHcCccccccCCCCC-CcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCC-CCCcHHHHHHHcCCHHHH
Q 026423 80 EILRRRDSLLRKNNWKG-ETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDD-EGNTPLHNAVRNKHENVV 157 (238)
Q Consensus 80 ~Ll~~~~~~~~~~~~~g-~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~ 157 (238)
+|++ .+.+++.++..| .||||+|+..|+.+++++|+++++.. .+. .|.||||+|+..|+.+++
T Consensus 113 ~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~--------------~~~~~g~t~L~~A~~~g~~~~v 177 (285)
T 3kea_A 113 LFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--------------FDLAILLSCIHITIKNGHVDMM 177 (285)
T ss_dssp HHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT--------------CCCSTHHHHHHHHHHTTCHHHH
T ss_pred HHHh-cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc--------------ccccCCccHHHHHHHcChHHHH
Confidence 9995 578889999999 79999999999999999999998663 222 889999999999999999
Q ss_pred HHHHHcCCccccccCCCCCCH-HHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 158 RMLVKKDRIPLGYLNNAEQTP-LSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 158 ~~ll~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
++|+++|+++ +..+..|.|| ||+|+..|+.+++++|+++| ++++.++. .|+..++.+++++|+++|++++
T Consensus 178 ~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g-ad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 178 ILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFKYD-INIYSANL-------ENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC-BCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCC
Confidence 9999999988 7899999998 99999999999999999999 99998873 5677999999999999999875
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=229.30 Aligned_cols=187 Identities=19% Similarity=0.221 Sum_probs=172.9
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhc--cccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHH----
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQN--IFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAA---- 104 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~---- 104 (238)
++|.|+..|+.+.++.+++.+.+ + +..|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~-n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVV-NIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHH-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcC-cCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 46788899999999999998876 5 8889999999999999999999999997666689999999999999999
Q ss_pred -HhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHH
Q 026423 105 -RVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAI 183 (238)
Q Consensus 105 -~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 183 (238)
..++.+++++|++.|.... ..+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~------------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~ 224 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINA------------KASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCAC 224 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTC------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred hhhhhHHHHHHHHHcCCCcc------------ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHH
Confidence 6789999999999996543 46778999999999999999999999999998 789999999999999
Q ss_pred HcCcHHHHHHHHh-cCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcc
Q 026423 184 DSSLTDIACFIID-QRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLN 232 (238)
Q Consensus 184 ~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g 232 (238)
..|+.+++++|++ .| ++++.+|..|.|||++|+..|+.+++++|++++
T Consensus 225 ~~g~~~iv~~Ll~~~g-ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 225 EHGHKEIAGLLLAVPS-CDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHTCHHHHHHHHTSTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHhcCC-CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999 56 999999999999999999999999999999875
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.8e-35 Score=209.72 Aligned_cols=163 Identities=18% Similarity=0.169 Sum_probs=152.7
Q ss_pred cccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCccccc
Q 026423 56 STMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLR 135 (238)
Q Consensus 56 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 135 (238)
+..+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..++.+++++|+++++++.
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------ 95 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVE-NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN------------ 95 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHH-HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT------------
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHH-hccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC------------
Confidence 5678899999999999999999999995 577788999999999999999999999999999997754
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 026423 136 ITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHS 215 (238)
Q Consensus 136 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 215 (238)
..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||+++
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~ 173 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEAS 173 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHH
Confidence 57889999999999999999999999999988 788999999999999999999999999998 9999999999999999
Q ss_pred HHHhcCcchhHHhhhccc
Q 026423 216 AVMRQNYGEPMIFISLNK 233 (238)
Q Consensus 216 A~~~~~~~~~~~L~~~g~ 233 (238)
|+..++.+++++|+++|.
T Consensus 174 A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 174 ARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHhccC
Confidence 999999999999999874
No 48
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6e-36 Score=227.29 Aligned_cols=216 Identities=15% Similarity=0.099 Sum_probs=173.8
Q ss_pred chhhhhhh----ccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHH
Q 026423 4 RSFEMTEF----GTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIP 79 (238)
Q Consensus 4 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~ 79 (238)
++.+++++ |++++..+. .+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.++++
T Consensus 51 g~~~~v~~Ll~~g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~ 123 (299)
T 1s70_B 51 GDTEEVLRLLERGADINYANV------DGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAE 123 (299)
T ss_dssp TCHHHHHHHHHHCCCTTCBCT------TCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHcCCCCcccCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHH
Confidence 34455554 555544432 3455899999999999999999999999 888999999999999999999999
Q ss_pred HHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhh-CccccCCCCC--------------CCcccccccCCCCCcH
Q 026423 80 EILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKY-APAITNGTES--------------EPESLLRITDDEGNTP 144 (238)
Q Consensus 80 ~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 144 (238)
+|+ ..+.+++..+..|.||||+|+..++.+++++++.. +.++...... .........+..|.||
T Consensus 124 ~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~ 202 (299)
T 1s70_B 124 YLI-SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTA 202 (299)
T ss_dssp HHH-HTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCH
T ss_pred HHH-hCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCH
Confidence 999 56778899999999999999999999999888764 3221100000 0000011345789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcch
Q 026423 145 LHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGE 224 (238)
Q Consensus 145 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~ 224 (238)
||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|... ..+.
T Consensus 203 L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~-~~~~ 279 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENL-CDMEAVNKVGQTAFDVADED-ILGY 279 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTTTSCCSG-GGHH
T ss_pred HHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHH-HHHH
Confidence 99999999999999999999988 789999999999999999999999999999 99999999999999999654 3344
Q ss_pred hHHhhh
Q 026423 225 PMIFIS 230 (238)
Q Consensus 225 ~~~L~~ 230 (238)
++.+++
T Consensus 280 l~~l~~ 285 (299)
T 1s70_B 280 LEELQK 285 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 49
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=7.7e-35 Score=203.90 Aligned_cols=167 Identities=21% Similarity=0.197 Sum_probs=112.1
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHH
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPA 110 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 110 (238)
+||.|+..|+.+.+++|++.+.+..+..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 5 SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 5777777777777777777776643666777777777777777777777777 345566666777777777777777777
Q ss_pred HHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHH
Q 026423 111 IVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDI 190 (238)
Q Consensus 111 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 190 (238)
++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.|||++|+..|+.++
T Consensus 84 ~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 84 IVGLLLERDVDIN------------IYDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp HHHHHHTTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcHHH
Confidence 7777777665533 45666777777777777777777777777666 5666677777777777777777
Q ss_pred HHHHHhcCCcccccCCCCCCcH
Q 026423 191 ACFIIDQRPESLNHRLPEELTL 212 (238)
Q Consensus 191 ~~~Ll~~~~~~~~~~~~~g~t~ 212 (238)
+++|++++ +++..++..|.||
T Consensus 151 ~~~L~~~~-~~~~~~~~~~~~p 171 (172)
T 3v30_A 151 QQVIENHI-LKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHH-HHHSCC-------
T ss_pred HHHHHHHH-HHHhcccCCCCCC
Confidence 77777776 6666666555554
No 50
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=5e-35 Score=202.87 Aligned_cols=158 Identities=16% Similarity=0.194 Sum_probs=85.2
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG 141 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (238)
..||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+. |+.+++++|+++++++. ..+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~------------~~~~~g 70 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD------------LKDRTG 70 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT------------CCCTTS
T ss_pred HhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC------------CCCCCC
Confidence 344555555555555555555 3344444555555555555555 55555555555544322 344455
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcC
Q 026423 142 NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQN 221 (238)
Q Consensus 142 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 221 (238)
.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.|...++.++..|.|||++|+..++
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 55555555555555555555555554 45555566666666666666666666665522245555666666666666666
Q ss_pred cchhHHhhhcccc
Q 026423 222 YGEPMIFISLNKC 234 (238)
Q Consensus 222 ~~~~~~L~~~g~~ 234 (238)
.+++++|+++|+|
T Consensus 150 ~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 150 NEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCC
Confidence 6666666666654
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=6.5e-35 Score=203.30 Aligned_cols=160 Identities=15% Similarity=0.130 Sum_probs=105.1
Q ss_pred CCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCC
Q 026423 61 RGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDE 140 (238)
Q Consensus 61 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 140 (238)
.|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..|+.+++++|+++++++. ..+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~ 68 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ------------LLGKG 68 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTT
T ss_pred CCcchHHHHHHCCCHHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------------CcCCC
Confidence 35566666666666666666663 344556666666666666666666666666666665433 34556
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhc
Q 026423 141 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQ 220 (238)
Q Consensus 141 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 220 (238)
|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.| ++++.++..|.||+++|+..+
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 69 RESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 666666666666666666666666665 566666777777777777777777777666 666666777777777777777
Q ss_pred CcchhHHhhhccccc
Q 026423 221 NYGEPMIFISLNKCL 235 (238)
Q Consensus 221 ~~~~~~~L~~~g~~~ 235 (238)
+.+++++|+++++++
T Consensus 147 ~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 147 YRSVQQVIESHLLKL 161 (167)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 777777777666543
No 52
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=9.9e-35 Score=203.35 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=151.2
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG 141 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (238)
+.+|||.|+..|+.+++++|++.++..++.++..|.||||+|+..|+.+++++|+++|+++. ..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~g 69 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH------------ILAKER 69 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT------------CCCTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch------------hhcccC
Confidence 46899999999999999999987777789999999999999999999999999999997754 578899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcC
Q 026423 142 NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQN 221 (238)
Q Consensus 142 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 221 (238)
.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.| ++++.+|..|.|||++|+..++
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 70 ESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCc
Confidence 99999999999999999999999988 788999999999999999999999999999 9999999999999999999999
Q ss_pred cchhHHhhhcccccCC
Q 026423 222 YGEPMIFISLNKCLSI 237 (238)
Q Consensus 222 ~~~~~~L~~~g~~~~~ 237 (238)
.+++++|+++|+++..
T Consensus 148 ~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 148 RKVQQVIENHILKLFQ 163 (172)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988653
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=3.1e-34 Score=200.28 Aligned_cols=158 Identities=23% Similarity=0.221 Sum_probs=99.4
Q ss_pred CCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCC
Q 026423 60 PRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDD 139 (238)
Q Consensus 60 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 139 (238)
..+.++|++|+..|+.+++++|++ .+.+++.++..|.||||+|+..|+.+++++|+++++++. ..+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~ 78 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN------------AVDH 78 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCT
T ss_pred CcccchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------ccCC
Confidence 344556666666666666666663 444555555666666666666666666666666654432 3455
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 026423 140 EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMR 219 (238)
Q Consensus 140 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~ 219 (238)
.|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..
T Consensus 79 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 79 AGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh
Confidence 6666666666666666666666666665 556666667777777667777777777666 66666666677777777777
Q ss_pred cCcchhHHhhhcc
Q 026423 220 QNYGEPMIFISLN 232 (238)
Q Consensus 220 ~~~~~~~~L~~~g 232 (238)
++.+++++|+++|
T Consensus 157 ~~~~~~~~L~~~G 169 (169)
T 2y1l_E 157 GNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcC
Confidence 7777777766655
No 54
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.2e-34 Score=199.60 Aligned_cols=156 Identities=26% Similarity=0.341 Sum_probs=146.8
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
..++|+.|+..|+.+++++|+++|.++ +..+..|.||||+|+. |+.+++++|+ ..+.+++.++..|.||||+|+..+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456899999999999999999999999 8889999999999999 9999999999 467888999999999999999999
Q ss_pred CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCc
Q 026423 108 DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSL 187 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 187 (238)
+.+++++|+++++++. ..+..|.||||+|++.|+.+++++|++.|++.++..+..|.||||+|+..|+
T Consensus 82 ~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVN------------IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp CHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCC------------CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 9999999999987754 5788999999999999999999999999998768899999999999999999
Q ss_pred HHHHHHHHhcC
Q 026423 188 TDIACFIIDQR 198 (238)
Q Consensus 188 ~~~~~~Ll~~~ 198 (238)
.+++++|+++|
T Consensus 150 ~~~~~~Ll~~G 160 (162)
T 1ihb_A 150 NEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999998
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-35 Score=224.09 Aligned_cols=184 Identities=14% Similarity=0.034 Sum_probs=148.2
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCC---cchHHHHHHcCccccccCCCCCCcHHHH
Q 026423 26 TTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRN---HKVIPEILRRRDSLLRKNNWKGETPLHI 102 (238)
Q Consensus 26 ~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~g~~~l~~ 102 (238)
..+.||||+|+..|+.++|++|+++|+++ +..+..|.||||+|+..|+ .+++..|++....+++.++..|+||||+
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 34455999999999999999999999999 8999999999999999998 8999999977768899999999999999
Q ss_pred HHH----hCCHHHHHHHHhhCccccCCC--------CCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccc
Q 026423 103 AAR----VGDPAIVSTILKYAPAITNGT--------ESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 170 (238)
Q Consensus 103 a~~----~~~~~~~~~ll~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 170 (238)
|+. .|+.+++++|++.+....... .......++..+..|.||||.|+. +++|++.+ ++.
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~---~n~ 278 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM---LNA 278 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT---TTC
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC---CCC
Confidence 999 899999999998753211000 000122345688899999999985 89999884 377
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhc
Q 026423 171 LNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQ 220 (238)
Q Consensus 171 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 220 (238)
.+..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+++|
T Consensus 279 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 279 QDSNGDTCLNIAARLGNISIVDALLDYG-ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHHTT-CCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcC
Confidence 8999999999999999999999999999 999999999999999998764
No 56
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1.3e-34 Score=204.06 Aligned_cols=162 Identities=18% Similarity=0.139 Sum_probs=96.0
Q ss_pred CCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCC
Q 026423 61 RGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDE 140 (238)
Q Consensus 61 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 140 (238)
.+.++|+.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++|+++. ..+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~ 71 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN------------VMNRG 71 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC------------CcCCC
Confidence 345556666666666666666655555555556666666666666666666666666554432 34555
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhc
Q 026423 141 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQ 220 (238)
Q Consensus 141 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 220 (238)
|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..+
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 72 DDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHHH
Confidence 666666666666666666666666555 455566666666666666666666666665 566666666666666666666
Q ss_pred CcchhHHhhhcccccC
Q 026423 221 NYGEPMIFISLNKCLS 236 (238)
Q Consensus 221 ~~~~~~~L~~~g~~~~ 236 (238)
+.+++++|+++|++++
T Consensus 150 ~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 150 RELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHhhcCcc
Confidence 6666666666666554
No 57
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.5e-34 Score=207.87 Aligned_cols=167 Identities=22% Similarity=0.247 Sum_probs=151.7
Q ss_pred CCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCC
Q 026423 61 RGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDE 140 (238)
Q Consensus 61 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 140 (238)
.|.||||+|+..|+.+++++|++..+.+++.++..|.||||+|+..|+.+++++|++.+++..... .+..+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------~~~~~~~ 74 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP-------MTSELYE 74 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC-------CCSTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc-------ccccCCC
Confidence 589999999999999999999976689999999999999999999999999999999998753211 1356778
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCccccccCC-------------CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCC
Q 026423 141 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNN-------------AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLP 207 (238)
Q Consensus 141 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 207 (238)
|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~ 152 (232)
T 2rfa_A 75 GQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDS 152 (232)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCT
T ss_pred CcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCC
Confidence 999999999999999999999999987 45444 7999999999999999999999998 99999999
Q ss_pred CCCcHHHHHHHhcCcchh----HHhhhcccccC
Q 026423 208 EELTLLHSAVMRQNYGEP----MIFISLNKCLS 236 (238)
Q Consensus 208 ~g~t~l~~A~~~~~~~~~----~~L~~~g~~~~ 236 (238)
.|+||||+|+..++.+++ ++|+++|++.+
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 999999999999999988 99999999763
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1e-33 Score=197.62 Aligned_cols=159 Identities=25% Similarity=0.371 Sum_probs=146.5
Q ss_pred CCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHH
Q 026423 25 PTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAA 104 (238)
Q Consensus 25 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~ 104 (238)
.....++|+.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++..+..|.||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHH
Confidence 344566899999999999999999999999 888999999999999999999999999 567788999999999999999
Q ss_pred HhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHH
Q 026423 105 RVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAID 184 (238)
Q Consensus 105 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 184 (238)
..++.+++++|+++++++. ..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||+++|++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVN------------ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISID 155 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 9999999999999997754 57889999999999999999999999999998 7889999999999999
Q ss_pred cCcHHHHHHHHhcC
Q 026423 185 SSLTDIACFIIDQR 198 (238)
Q Consensus 185 ~~~~~~~~~Ll~~~ 198 (238)
.|+.+++++|++.|
T Consensus 156 ~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 156 NGNEDLAEILQKLN 169 (169)
T ss_dssp TTCHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHcC
Confidence 99999999999875
No 59
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.8e-34 Score=210.28 Aligned_cols=199 Identities=17% Similarity=0.138 Sum_probs=165.5
Q ss_pred chhhhhhhccccCCC---CCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHH
Q 026423 4 RSFEMTEFGTDYKEP---TMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPE 80 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ 80 (238)
++.+++++.++.... .++.. ...+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++
T Consensus 19 g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~ 96 (236)
T 1ikn_D 19 EEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGV 96 (236)
T ss_dssp TCSSSSSCCCC-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred CChhHHHHHHHHhhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 445555555443322 22222 234556899999999999999999999999 8889999999999999999999999
Q ss_pred HHHcCc-----cccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCC-CCCcHHHHHHHcCCH
Q 026423 81 ILRRRD-----SLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDD-EGNTPLHNAVRNKHE 154 (238)
Q Consensus 81 Ll~~~~-----~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~ 154 (238)
|++.+. ..++..+..|.||||+|+..|+.+++++|+++|+++. ..+. .|.||||+|+..|+.
T Consensus 97 Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 97 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN------------AQEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp HHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT------------CCCTTTCCCHHHHHHHTTCH
T ss_pred HHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCCCCCHHHHHHHcCCH
Confidence 996553 3367788899999999999999999999999998755 4665 899999999999999
Q ss_pred HHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccc--cCCCCCCcHHHHHHH
Q 026423 155 NVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLN--HRLPEELTLLHSAVM 218 (238)
Q Consensus 155 ~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~--~~~~~g~t~l~~A~~ 218 (238)
+++++|+++|+++ +..+..|.|||++|+..|+.+++++|+++| ++.. ..+..|.|+.+.+..
T Consensus 165 ~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 165 DLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQLT-LENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp HHHHHHHTTTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHTTS-CGGGSSCCCCCTTTCCCCC--
T ss_pred HHHHHHHHcCCCC-CcccCCCCCHHHHHHccCchHHHHHHHHcc-hhhhhcCCccchHHHHhhhcc
Confidence 9999999999998 789999999999999999999999999999 6554 777888888765543
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.6e-33 Score=200.18 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=158.8
Q ss_pred chhhhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHH
Q 026423 4 RSFEMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
++.+.++..+.....+++..+. .+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 93 (201)
T 3hra_A 16 RDTKKVKEILQDTTYQVDEVDT-EGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLK 93 (201)
T ss_dssp TCHHHHHHHHTCTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHcCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 4556666655544434444333 3456899999999999999999999999 8899999999999999999999999998
Q ss_pred cCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhC-ccccCCCCCCCcccccccCCCCCcHHHHHHHcCC-----HHHH
Q 026423 84 RRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYA-PAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-----ENVV 157 (238)
Q Consensus 84 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~ 157 (238)
..+.+++..+..|.||||+|+..++.+++++|++++ .++ +..+..|.||||+|+..++ .+++
T Consensus 94 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 94 HATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI------------DFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp HSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT------------TCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred ccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc------------CCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 888899999999999999999999999999999998 443 3678899999999999998 9999
Q ss_pred HHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 158 RMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 158 ~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
++|++.|+++ +..+..|.||||+|++.|+.+++++|+++|
T Consensus 162 ~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999998 789999999999999999999999999876
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=2.1e-34 Score=200.36 Aligned_cols=160 Identities=19% Similarity=0.200 Sum_probs=131.4
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD 138 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 138 (238)
+..|.|+||.|+..|+.+++++|++..+...+..+..|.||||+|+..|+.+++++|+++++++. ..+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~ 72 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH------------AKD 72 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCC
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC------------ccC
Confidence 55678888888888888888888866777777777788888888888888888888888876643 567
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 026423 139 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVM 218 (238)
Q Consensus 139 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~ 218 (238)
..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||+++|..
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 73 KGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc
Confidence 78888888888888888888888888887 677888888888888888888888888888 8888888888888888766
Q ss_pred hcCcchhHHhhhccc
Q 026423 219 RQNYGEPMIFISLNK 233 (238)
Q Consensus 219 ~~~~~~~~~L~~~g~ 233 (238)
++.+++++|++.|+
T Consensus 151 -~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 -GDTDIQDLLRGDAA 164 (165)
T ss_dssp -TCHHHHHHHHTC--
T ss_pred -CChHHHHHHhhccc
Confidence 78888888888875
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-34 Score=222.39 Aligned_cols=184 Identities=17% Similarity=0.172 Sum_probs=153.1
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccc-cCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCC-
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFST-MSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGD- 108 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~- 108 (238)
.+|.|+..+..+++++|++.|.++ +. .+..|.||||+|+..|+.+++++|+ ..+++++.++..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHHHHHSSHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhccc
Confidence 357788888889999999999999 77 8999999999999999999999999 5678899999999999999999998
Q ss_pred --HHHHHHHHhhC-ccccCCCCCCCcccccccCCCCCcHHHHHHH----cCCHHHHHHHHHc------------------
Q 026423 109 --PAIVSTILKYA-PAITNGTESEPESLLRITDDEGNTPLHNAVR----NKHENVVRMLVKK------------------ 163 (238)
Q Consensus 109 --~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~ll~~------------------ 163 (238)
.++++.|++.+ ++ ++..+..|.||||+|+. .|+.+++++|++.
T Consensus 178 ~~~~~~~~ll~~~~~~------------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~ 245 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPC------------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN 245 (327)
T ss_dssp HHTTCHHHHHHHHGGG------------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--
T ss_pred ccHHHHHHHHHhhhcc------------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhh
Confidence 67888888876 33 33688999999999999 8999999999987
Q ss_pred --CCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 164 --DRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 164 --~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
|+++ +..+..|.||||.|+. +++|++. +++.+|..|+||||+|+..|+.+++++|+++|++++++
T Consensus 246 ~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 246 EKESKP-NDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp ---------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred cccCCc-ccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 6666 7789999999999985 8999987 48999999999999999999999999999999999864
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.7e-33 Score=194.41 Aligned_cols=155 Identities=19% Similarity=0.205 Sum_probs=146.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCC
Q 026423 29 DHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGD 108 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 108 (238)
.+|||.|+..|+.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQ-NGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCC
Confidence 44899999999999999999999998 8889999999999999999999999995 578889999999999999999999
Q ss_pred HHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcH
Q 026423 109 PAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLT 188 (238)
Q Consensus 109 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 188 (238)
.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||+++|+..|+.
T Consensus 82 ~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~ 148 (167)
T 3v31_A 82 TDIVKMLLDCGVDVN------------EYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYR 148 (167)
T ss_dssp HHHHHHHHHHTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHHCCCCCC------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcH
Confidence 999999999987754 57889999999999999999999999999998 78899999999999999999
Q ss_pred HHHHHHHhcC
Q 026423 189 DIACFIIDQR 198 (238)
Q Consensus 189 ~~~~~Ll~~~ 198 (238)
+++++|++++
T Consensus 149 ~~~~~L~~~~ 158 (167)
T 3v31_A 149 SVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 64
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.9e-33 Score=199.27 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=146.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
.+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHc
Confidence 3455899999999999999999999998 8889999999999999999999999994 6778899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcC
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSS 186 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 186 (238)
++.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||+++|+..|
T Consensus 112 ~~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 112 GYSEMSYFLLEHGANVN------------DRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFG 178 (192)
T ss_dssp TCHHHHHHHHHTTCCSS------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhC
Confidence 99999999999997754 57889999999999999999999999999988 788999999999999999
Q ss_pred cHHHHHHHHhcC
Q 026423 187 LTDIACFIIDQR 198 (238)
Q Consensus 187 ~~~~~~~Ll~~~ 198 (238)
+.+++++|++.+
T Consensus 179 ~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 179 RQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHhcc
Confidence 999999999876
No 65
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=5.6e-33 Score=191.35 Aligned_cols=154 Identities=21% Similarity=0.278 Sum_probs=104.8
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG 141 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (238)
+.||||+|+..|+.+++++|++..+.+++..+..|.||||+ +..|+.+++++|+++|+++. ..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~------------~~~~~g 68 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN------------VQDTSG 68 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT------------CCCTTS
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC------------CcCCCC
Confidence 35667777777777777777655444566666667777777 66677777777776665533 455667
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcC
Q 026423 142 NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQN 221 (238)
Q Consensus 142 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 221 (238)
.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++. ++++.+|..|.|||++|+..++
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 69 TSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCc
Confidence 77777777777777777777777665 56666777777777777777777777765 5666777777777777777777
Q ss_pred cchhHHhhhc
Q 026423 222 YGEPMIFISL 231 (238)
Q Consensus 222 ~~~~~~L~~~ 231 (238)
.+++++|+++
T Consensus 146 ~~~v~~Ll~~ 155 (156)
T 1bd8_A 146 QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 7777777653
No 66
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-33 Score=190.21 Aligned_cols=147 Identities=25% Similarity=0.342 Sum_probs=70.2
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHH
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPA 110 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 110 (238)
+|+.|+..|+.+++++|++.|.++ + .+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 5 KLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 455555555555555555555543 2 2444555555555555555555555 334444444444555555555555555
Q ss_pred HHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHH
Q 026423 111 IVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDI 190 (238)
Q Consensus 111 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 190 (238)
++++|+++|+++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||+++|+..|+.++
T Consensus 82 ~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 82 IVEVLLKHGADVN------------AKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp HHHHHHTTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCCCC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHH
Confidence 5555554443322 23344444444444444444444444444443 3344444444444444444444
Q ss_pred HHH
Q 026423 191 ACF 193 (238)
Q Consensus 191 ~~~ 193 (238)
+++
T Consensus 149 ~~~ 151 (153)
T 1awc_B 149 AEI 151 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=219.81 Aligned_cols=200 Identities=19% Similarity=0.135 Sum_probs=168.1
Q ss_pred hhhhhccccCCCCCCCCCCCCCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCc
Q 026423 7 EMTEFGTDYKEPTMDQELPTTMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRD 86 (238)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 86 (238)
.+++.+.+++... .....+.++||.|+..|+.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|+ ..+
T Consensus 3 ~ll~~~~~~~~~~---~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~g 77 (229)
T 2vge_A 3 SVLRKAGSPRKAR---RARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLI-TAG 77 (229)
T ss_dssp -------CCCCCC---CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred ehhccCCCCcccc---ccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HCC
Confidence 3556666665544 22344567899999999999999999999999 889999999999999999999999999 567
Q ss_pred cccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC-CCCCcHHHHH--HHcCCHHHHHHHHHc
Q 026423 87 SLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD-DEGNTPLHNA--VRNKHENVVRMLVKK 163 (238)
Q Consensus 87 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~ll~~ 163 (238)
.+++.++..|.||||+|+..|+.+++++|+++|+++. ..+ ..|.||||+| +..|+.+++++|++.
T Consensus 78 a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~------------~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 78 ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF------------ATTLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT------------CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc------------cccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 8899999999999999999999999999999998765 344 6899999999 999999999999999
Q ss_pred CCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcc--cccCCCCCCcHHHHHHHhcCcchhHHh
Q 026423 164 DRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPES--LNHRLPEELTLLHSAVMRQNYGEPMIF 228 (238)
Q Consensus 164 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~t~l~~A~~~~~~~~~~~L 228 (238)
|+++ +..+..|.||++.++... ..++|++.| ++ ++.+|..|+||||+|+..|+.++++..
T Consensus 146 ga~~-~~~~~~~~~~l~~~~~~~---~~~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 146 EQSM-GLMNSGAVYALWDYSAEF---GDELSFREG-ESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp HHHT-TTSGGGEEEESSCBCCSS---TTBCCBCTT-CEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred CCCc-ccccCCchHHHHHHhhcc---ccccCcccc-ccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 9988 778888999998654443 336778887 66 788899999999999999999998763
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-32 Score=186.24 Aligned_cols=151 Identities=19% Similarity=0.243 Sum_probs=139.6
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG 141 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (238)
..++|+.|+..|+.+++++|++.+ .+.+ .+..|.||||+|+..|+.+++++|+++++++. ..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g-~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~g 67 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANG-APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD------------ARTKVD 67 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT-CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT------------CCCTTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcC-CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCC
Confidence 468999999999999999999654 4444 57889999999999999999999999987754 578889
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcC
Q 026423 142 NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQN 221 (238)
Q Consensus 142 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 221 (238)
.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..|+
T Consensus 68 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 68 RTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999988 788999999999999999999999999998 9999999999999999999999
Q ss_pred cchhHHh
Q 026423 222 YGEPMIF 228 (238)
Q Consensus 222 ~~~~~~L 228 (238)
.+++++|
T Consensus 146 ~~i~~~L 152 (153)
T 1awc_B 146 EDLAEIL 152 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2.1e-32 Score=192.67 Aligned_cols=163 Identities=23% Similarity=0.308 Sum_probs=150.4
Q ss_pred HHHHHHHcCCHHHHHHHHhhhh-ccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCH
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQ-NIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDP 109 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~ 109 (238)
+|+.|+..|+.+++++|++.+. ++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.
T Consensus 8 ~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 8 DIFTQCREGNAVAVRLWLDNTENDL-NQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp CHHHHHHHTCHHHHHHHHHCTTSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 6999999999999999999854 55 888999999999999999999999999 56788899999999999999999999
Q ss_pred HHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHH
Q 026423 110 AIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTD 189 (238)
Q Consensus 110 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 189 (238)
+++++|+++|+++. ..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||+++|+..++.+
T Consensus 86 ~~v~~Ll~~g~~~~------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~ 152 (179)
T 3f6q_A 86 DIVQKLLQYKADIN------------AVNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKAPLREL 152 (179)
T ss_dssp HHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCHHHHHH
T ss_pred HHHHHHHHcCCCCC------------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHHHHHHH
Confidence 99999999997754 67889999999999999999999999999998 789999999999999999999
Q ss_pred HHHHHHhcCCcccccCCCCC
Q 026423 190 IACFIIDQRPESLNHRLPEE 209 (238)
Q Consensus 190 ~~~~Ll~~~~~~~~~~~~~g 209 (238)
++++|++.| ++++..+..+
T Consensus 153 ~~~~L~~~g-~~~~~~~~~~ 171 (179)
T 3f6q_A 153 LRERAEKMG-QNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHTT-CCCSCBCCCC
T ss_pred HHHHHHHhh-cCcccCCccc
Confidence 999999999 8887766543
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.2e-32 Score=205.11 Aligned_cols=177 Identities=24% Similarity=0.292 Sum_probs=143.2
Q ss_pred CCCCCHHHHHHHHc---CCHHHHHHHHhhhhccc------cc----cCCCCchHHHHHHHcCCcchHHHHHHcCcccccc
Q 026423 25 PTTMDHELLNVLRR---GDEHQISLIAGRMQNIF------ST----MSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRK 91 (238)
Q Consensus 25 ~~~~~~~l~~A~~~---~~~~~v~~Ll~~~~~~~------~~----~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~ 91 (238)
...+.||||+|+.. |+.+++++|+++|+++. +. .+..|.||||+|+..|+.+++++|++ .+.+++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE-NGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcCc
Confidence 34566699999987 99999999999997631 22 45689999999999999999999995 5778888
Q ss_pred CCC--------------CCCcHHHHHHHhCCHHHHHHHHh---hCccccCCCCCCCcccccccCCCCCcHHHHHHHcCC-
Q 026423 92 NNW--------------KGETPLHIAARVGDPAIVSTILK---YAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH- 153 (238)
Q Consensus 92 ~~~--------------~g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~- 153 (238)
++. .|.||||+|+..|+.+++++|++ +|+++. .++..|.||||+|+..|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~------------~~d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS------------ARDSVGNTVLHALVEVADN 197 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT------------CCCTTSCCHHHHHHHHCCS
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce------------eeCCCCCcHHHHHHHccCc
Confidence 886 79999999999999999999999 777654 688899999999999888
Q ss_pred --------HHHHHHHHHcCCccc------cccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHH
Q 026423 154 --------ENVVRMLVKKDRIPL------GYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLH 214 (238)
Q Consensus 154 --------~~~~~~ll~~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 214 (238)
.+++++|++.|+++. +..+..|.||||+|++.|+.+++++|+++|..+.......+.+|.+
T Consensus 198 ~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred chhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 799999999998873 2589999999999999999999999999994477766666666543
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=5.7e-32 Score=201.04 Aligned_cols=158 Identities=22% Similarity=0.249 Sum_probs=141.8
Q ss_pred CCCHHHHHHHHc---CCHHHHHHHHhhhhccccc-----------cCCCCchHHHHHHHcCCcchHHHHHHcCccccccC
Q 026423 27 TMDHELLNVLRR---GDEHQISLIAGRMQNIFST-----------MSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKN 92 (238)
Q Consensus 27 ~~~~~l~~A~~~---~~~~~v~~Ll~~~~~~~~~-----------~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 92 (238)
.+.+|||+|+.. |+.+++++|++.|.++ +. .+..|.||||+|+..|+.+++++|++ .+.+++.+
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~ 119 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDS-GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVE-NGADVHLR 119 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHT-TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcc-cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcc
Confidence 344589999999 9999999999999987 32 23679999999999999999999995 67778888
Q ss_pred CCC-------------CCcHHHHHHHhCCHHHHHHHHh---hCccccCCCCCCCcccccccCCCCCcHHHHHHH--cCCH
Q 026423 93 NWK-------------GETPLHIAARVGDPAIVSTILK---YAPAITNGTESEPESLLRITDDEGNTPLHNAVR--NKHE 154 (238)
Q Consensus 93 ~~~-------------g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~~~~ 154 (238)
+.. |.||||+|+..|+.+++++|++ +|+++. .++..|.||||+|+. .++.
T Consensus 120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n------------~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE------------ATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT------------CCCTTSCCHHHHHHHHCCSCH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC------------ccCCCCCCHHHHHHHcccCCc
Confidence 876 9999999999999999999999 787754 688899999999999 8888
Q ss_pred H-------HHHHHHHcCCccc------cccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 155 N-------VVRMLVKKDRIPL------GYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 155 ~-------~~~~ll~~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
+ ++++|++.|+++. +..|..|.||||+|++.|+.+++++|+++|
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 8 9999999998873 578999999999999999999999999998
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=5.1e-32 Score=188.25 Aligned_cols=157 Identities=22% Similarity=0.323 Sum_probs=142.2
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
.+.++|+.|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHc
Confidence 45678999999999999999999654333777888999999999999999999999 56778899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcC
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSS 186 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 186 (238)
++.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||+++|+. +
T Consensus 86 ~~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVN------------VADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp TCHHHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT-T
T ss_pred CcHHHHHHHHhCCCCCC------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc-C
Confidence 99999999999997754 57889999999999999999999999999998 7899999999999876 8
Q ss_pred cHHHHHHHHhcC
Q 026423 187 LTDIACFIIDQR 198 (238)
Q Consensus 187 ~~~~~~~Ll~~~ 198 (238)
+.+++++|++.|
T Consensus 152 ~~~i~~~L~~~g 163 (165)
T 3twr_A 152 DTDIQDLLRGDA 163 (165)
T ss_dssp CHHHHHHHHTC-
T ss_pred ChHHHHHHhhcc
Confidence 999999999887
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.98 E-value=1.6e-31 Score=184.01 Aligned_cols=152 Identities=22% Similarity=0.363 Sum_probs=139.8
Q ss_pred CHHHHHHHHcCCHHHHHHHHhh-hhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhC
Q 026423 29 DHELLNVLRRGDEHQISLIAGR-MQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 107 (238)
.++|+.|+..|+.+++++|++. +.++ +..+..|.||||+ +..|+.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHP-DALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCT-TCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCc-cccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcC
Confidence 4689999999999999999998 2366 8889999999999 9999999999999 567888999999999999999999
Q ss_pred CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCc
Q 026423 108 DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSL 187 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 187 (238)
+.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|++. +++ +..+..|.||+++|+..|+
T Consensus 80 ~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVN------------VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGA 145 (156)
T ss_dssp CHHHHHHHHHTTCCSC------------CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCC
T ss_pred cHHHHHHHHHcCCCCC------------CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCc
Confidence 9999999999997754 5788999999999999999999999999 666 7889999999999999999
Q ss_pred HHHHHHHHhc
Q 026423 188 TDIACFIIDQ 197 (238)
Q Consensus 188 ~~~~~~Ll~~ 197 (238)
.+++++|+++
T Consensus 146 ~~~v~~Ll~~ 155 (156)
T 1bd8_A 146 QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999974
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=2.3e-33 Score=206.48 Aligned_cols=187 Identities=17% Similarity=0.116 Sum_probs=132.0
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
.+.+||+.|+..|+.+.++.|+++|.++ +. +..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHc
Confidence 4566899999999999999999999998 54 477899999999999999999999 56668899999999999999999
Q ss_pred CCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCC-CHHHHH--H
Q 026423 107 GDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQ-TPLSIA--I 183 (238)
Q Consensus 107 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~-t~l~~a--~ 183 (238)
|+.+++++|+++|+++. .++..|.||||+|+..|+.+++++|+++|+++ +..+..|. ||+|+| +
T Consensus 81 g~~~~v~~Ll~~ga~~~------------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVN------------AADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp TCHHHHHHHHHHTCCTT------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSS
T ss_pred CCHHHHHHHHHcCCCCC------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHh
Confidence 99999999999987754 67889999999999999999999999999998 66676666 999999 7
Q ss_pred HcCcHHHHHHHHhcCCcccccC---------CCCCCcHHHHHHHhcCcchhHHhhhcc
Q 026423 184 DSSLTDIACFIIDQRPESLNHR---------LPEELTLLHSAVMRQNYGEPMIFISLN 232 (238)
Q Consensus 184 ~~~~~~~~~~Ll~~~~~~~~~~---------~~~g~t~l~~A~~~~~~~~~~~L~~~g 232 (238)
..|+.+++++|++.+ ++++.. +..+.++.+++...|. +++.|.+.+
T Consensus 148 ~~g~~~~~~~Ll~~~-a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~ 202 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQ-EKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHRED 202 (239)
T ss_dssp STTCCCHHHHHHHHH-HHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCT
T ss_pred hhccHHHHHHHHHhh-hcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecC
Confidence 889999999999998 777665 5567888888777665 444444443
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=3e-32 Score=200.50 Aligned_cols=163 Identities=18% Similarity=0.170 Sum_probs=120.6
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD 138 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 138 (238)
+..|.||||.|+..++.+.++.|+ ..+.+++.. ..|.||||.|+..|+.+++++|++.++++. ..+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll-~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~d 67 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERI-AHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS------------LPN 67 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC------------CCC
T ss_pred CccccccCchhhhhhhHHHHHHHh-ccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCC------------CcC
Confidence 457999999999999999999999 566666654 578999999999999999999999987644 678
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCC-cHHHHH-
Q 026423 139 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEEL-TLLHSA- 216 (238)
Q Consensus 139 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~A- 216 (238)
..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++| ++++.++..|. ||+|+|
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~ 145 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCE 145 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHH
Confidence 89999999999999999999999999998 789999999999999999999999999999 99999998887 999999
Q ss_pred -HHhcCcchhHHhhhcccccCC
Q 026423 217 -VMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 217 -~~~~~~~~~~~L~~~g~~~~~ 237 (238)
+..|+.+++++|+++|+++++
T Consensus 146 ~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 146 EMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp SSSTTCCCHHHHHHHHHHHTTT
T ss_pred HhhhccHHHHHHHHHhhhcccc
Confidence 788999999999999999875
No 76
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=199.15 Aligned_cols=156 Identities=16% Similarity=0.271 Sum_probs=143.9
Q ss_pred CCHHHHHHHHcCCHHHHHHHHhhhh-ccccccCCCCchHHHHHH-----HcCCcchHHHHHHcCccccccCCCCCCcHHH
Q 026423 28 MDHELLNVLRRGDEHQISLIAGRMQ-NIFSTMSPRGNTVLHMAI-----RFRNHKVIPEILRRRDSLLRKNNWKGETPLH 101 (238)
Q Consensus 28 ~~~~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~ 101 (238)
+.||||+|+..|+.+++++|++.|. ++ +..+..|.||||+|+ ..++.+++++|++ .+...+..+..|.||||
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTALATLKTQDDIETVLQLFR-LGNINAKASQAGQTALM 188 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHH-HSCTTCCCTTTCCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHH-cCCCccccCCCCCCHHH
Confidence 4459999999999999999999998 77 889999999999999 6688999999994 56777888889999999
Q ss_pred HHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCccccccCCCCCCHHH
Q 026423 102 IAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVK-KDRIPLGYLNNAEQTPLS 180 (238)
Q Consensus 102 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~g~t~l~ 180 (238)
+|+..|+.+++++|+++|+++. .++..|.||||+|+..|+.+++++|++ .|+++ +..|..|.||||
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n------------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~TpL~ 255 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVN------------VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-SLTDRDGSTALM 255 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-TCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCC------------CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-cCcCCCCCCHHH
Confidence 9999999999999999998754 678899999999999999999999999 78887 789999999999
Q ss_pred HHHHcCcHHHHHHHHhcC
Q 026423 181 IAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 181 ~a~~~~~~~~~~~Ll~~~ 198 (238)
+|+..|+.+++++|+++.
T Consensus 256 ~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhcc
Confidence 999999999999999876
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.6e-31 Score=199.07 Aligned_cols=163 Identities=25% Similarity=0.306 Sum_probs=142.1
Q ss_pred CCCCHHHHHHH---HcCCHHHHHHHHhhhhccc----------cccCCCCchHHHHHHHcCCcchHHHHHHcCccccccC
Q 026423 26 TTMDHELLNVL---RRGDEHQISLIAGRMQNIF----------STMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKN 92 (238)
Q Consensus 26 ~~~~~~l~~A~---~~~~~~~v~~Ll~~~~~~~----------~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 92 (238)
..+.+|||+|+ ..|+.+++++|++.|.++. ...+..|.||||+|+..|+.+++++|++ .+.+++.+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVE-KGADVHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH-TTCCTTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHh-CCCCcCcc
Confidence 34566999999 7799999999999987631 3334589999999999999999999995 67788888
Q ss_pred C--------------CCCCcHHHHHHHhCCHHHHHHHHh---hCccccCCCCCCCcccccccCCCCCcHHHHHHHcCC--
Q 026423 93 N--------------WKGETPLHIAARVGDPAIVSTILK---YAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-- 153 (238)
Q Consensus 93 ~--------------~~g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-- 153 (238)
+ ..|.||||+|+..|+.+++++|++ +|+++. .++..|.||||+|+..++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~------------~~d~~g~TpLh~A~~~~~~~ 190 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR------------RQDSRGNTVLHALVAIADNT 190 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT------------CCCTTSCCHHHHHHHHCCSS
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc------------ccCCCCCcHHHHHHHhccCc
Confidence 7 689999999999999999999999 777654 688899999999998887
Q ss_pred -------HHHHHHHHHcCCccc------cccCCCCCCHHHHHHHcCcHHHHHHHHhcCCccc
Q 026423 154 -------ENVVRMLVKKDRIPL------GYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESL 202 (238)
Q Consensus 154 -------~~~~~~ll~~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 202 (238)
.+++++|++.|+++. +..+..|.||||+|++.|+.+++++|+++| .+.
T Consensus 191 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~ 251 (260)
T 3jxi_A 191 RENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE-IAD 251 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH-HHH
T ss_pred hhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC-CCc
Confidence 799999999998873 468999999999999999999999999998 443
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=6.1e-31 Score=176.98 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=120.6
Q ss_pred ccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 026423 86 DSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDR 165 (238)
Q Consensus 86 ~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 165 (238)
+.+++..+..|.||||+|+..|+.+++++|+++++++. ..+..|.||||+|+. ++.+++++|++.|+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~ 68 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN------------ALNRFGRRPIQVMMM-GSAQVAELLLLHGA 68 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT------------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC------------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCC
Confidence 45677888899999999999999999999999887644 577889999999999 99999999999999
Q ss_pred ccccccCCC-CCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccc
Q 026423 166 IPLGYLNNA-EQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKC 234 (238)
Q Consensus 166 ~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~ 234 (238)
++ +..+.. |.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 69 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 69 EP-NCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88 778888 999999999999999999999998 99999999999999999999999999999999986
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.2e-32 Score=197.71 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=145.5
Q ss_pred HHHHHhhhhccc--cccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCcc
Q 026423 44 ISLIAGRMQNIF--STMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPA 121 (238)
Q Consensus 44 v~~Ll~~~~~~~--~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~ 121 (238)
|+.|++.|.++. +..+.++.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 467888888772 3345678889999999999999999995 6678899999999999999999999999999999977
Q ss_pred ccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCcccccc-CCCCCCHHHHH--HHcCcHHHHHHHHhcC
Q 026423 122 ITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYL-NNAEQTPLSIA--IDSSLTDIACFIIDQR 198 (238)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~g~t~l~~a--~~~~~~~~~~~Ll~~~ 198 (238)
+. ..+..|.||||+|+..|+.+++++|++.|+++ +.. +..|.||||+| +..|+.+++++|++.|
T Consensus 80 ~n------------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 80 VN------------SPDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVE 146 (229)
T ss_dssp TT------------CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH
T ss_pred CC------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC
Confidence 54 57889999999999999999999999999998 455 47999999999 9999999999999999
Q ss_pred CcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 199 PESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 199 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
++++.+|..|.+|++.+.... ..++|++.|++++
T Consensus 147 -a~~~~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~~ 180 (229)
T 2vge_A 147 -QSMGLMNSGAVYALWDYSAEF---GDELSFREGESVT 180 (229)
T ss_dssp -HHTTTSGGGEEEESSCBCCSS---TTBCCBCTTCEEE
T ss_pred -CCcccccCCchHHHHHHhhcc---ccccCcccccccc
Confidence 999999999999998655443 3467888898854
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=8.6e-31 Score=184.96 Aligned_cols=160 Identities=11% Similarity=0.021 Sum_probs=120.2
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCC-CCCCcHHHHHHHhCCH----HHHHHHHhhCccccCCCCCCCcccccc
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNN-WKGETPLHIAARVGDP----AIVSTILKYAPAITNGTESEPESLLRI 136 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~~~~ 136 (238)
++++|+.|+..|+.+.++.++.... +..+ ..|+||||+|+..++. +++++|+++|+++. .
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn------------~ 70 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK------------S 70 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS------------C
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC------------C
Confidence 3456677777777777666664321 2223 4567777777776654 46777777776644 4
Q ss_pred cCCCCCcHHHHHHHcCC------HHHHHHHHHcCCccccccCCCCC-CHHHHHHHcC-----cHHHHHHHHh-cCCcccc
Q 026423 137 TDDEGNTPLHNAVRNKH------ENVVRMLVKKDRIPLGYLNNAEQ-TPLSIAIDSS-----LTDIACFIID-QRPESLN 203 (238)
Q Consensus 137 ~~~~~~~~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~Ll~-~~~~~~~ 203 (238)
++..|+||||+|+..++ .+++++|+++|+++ +..|..|. ||||+|+..+ ..+++++|++ .| ++++
T Consensus 71 ~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~ 148 (186)
T 3t8k_A 71 RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLL 148 (186)
T ss_dssp CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTT
T ss_pred CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCc
Confidence 66677777777777665 57889999999988 78888999 9999998844 4568999998 77 9999
Q ss_pred cCCCCCCcHHHHHHHhcCcchhHHhhhcccccCCC
Q 026423 204 HRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSIV 238 (238)
Q Consensus 204 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~~ 238 (238)
.+|..|.||||+|+..++.+++++|.+...+++++
T Consensus 149 ~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 149 IKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp CCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999888777654
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.3e-29 Score=174.49 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=103.6
Q ss_pred ccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccc
Q 026423 57 TMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRI 136 (238)
Q Consensus 57 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 136 (238)
..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+ .|+.+++++|+++|+++. .
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~------------~ 72 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN------------C 72 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC------------C
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC------------C
Confidence 34667888888888888888888888 457777888888888888875 788888888888876644 5
Q ss_pred cCCCCCc-HHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 026423 137 TDDEGNT-PLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHS 215 (238)
Q Consensus 137 ~~~~~~~-~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 215 (238)
.+..|.| |||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||.+-
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAA-GGTRGSNHARIDAAEG 150 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcC-CCCCccCcCcCccccc
Confidence 6777888 888888888888888888888887 678888889999998888899999998888 8888888888888764
Q ss_pred H
Q 026423 216 A 216 (238)
Q Consensus 216 A 216 (238)
+
T Consensus 151 ~ 151 (156)
T 1bi7_B 151 P 151 (156)
T ss_dssp -
T ss_pred C
Confidence 3
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.5e-28 Score=163.00 Aligned_cols=126 Identities=26% Similarity=0.405 Sum_probs=119.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCC
Q 026423 95 KGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNA 174 (238)
Q Consensus 95 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 174 (238)
+|.||||+|+..|+.+++++|+++++++. ..+..|.||||+|+..++.+++++|++.|+++ +..+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 67 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKN 67 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC------------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCC
Confidence 48999999999999999999999987654 57789999999999999999999999999988 788999
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccc
Q 026423 175 EQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKC 234 (238)
Q Consensus 175 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~ 234 (238)
|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.+++++|+++|++
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 68 GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcHHHHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999998 99999999999999999999999999999999986
No 83
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=3.7e-31 Score=205.51 Aligned_cols=183 Identities=13% Similarity=0.140 Sum_probs=142.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHhhhhccc--cccCCCCchHHHHHHHcCCcchHHHHHHcCc----cccccCCCCCCcHHHH
Q 026423 29 DHELLNVLRRGDEHQISLIAGRMQNIF--STMSPRGNTVLHMAIRFRNHKVIPEILRRRD----SLLRKNNWKGETPLHI 102 (238)
Q Consensus 29 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~~g~~~l~~ 102 (238)
.+|||.|+..|+.++|++|+++|.... ...+..|.||||+|+..|+.+++++|++.++ .+++..+ .||||+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~ 169 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRL 169 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHH
Confidence 478999999999999999999987220 1234567899999999999999999996553 2333333 899999
Q ss_pred HHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHH-HcCCHHHHHHHHHcCCccccccCCCCCCHHHH
Q 026423 103 AARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAV-RNKHENVVRMLVKKDRIPLGYLNNAEQTPLSI 181 (238)
Q Consensus 103 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 181 (238)
|+..|+.+++++|+++|+++.. +..+..|.||||+|+ ..|+.+++++|++.|+ .|.||+++
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~----------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~ 231 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEAT----------AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIH 231 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHH----------HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHC
T ss_pred HHHCCCHHHHHHHHHcCCccch----------hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHH
Confidence 9999999999999999877431 015567899999999 9999999999998663 27899999
Q ss_pred HHHcCcHHHHHHHHhcCCcccc----------------------------------------------------------
Q 026423 182 AIDSSLTDIACFIIDQRPESLN---------------------------------------------------------- 203 (238)
Q Consensus 182 a~~~~~~~~~~~Ll~~~~~~~~---------------------------------------------------------- 203 (238)
|+..|+.+++++|+++| ++++
T Consensus 232 Aa~~g~~evv~lL~~~g-a~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~ 310 (376)
T 2aja_A 232 EFEYGEKYVNPFIARHV-NRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALA 310 (376)
T ss_dssp TTTTTTTTHHHHHHHHH-HHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGS
T ss_pred HHHCCCHHHHHHHHhcC-cccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhh
Confidence 99999999999998775 3221
Q ss_pred ---cCCCCCCcHHHHHHHhcCcchhHHhhhccc
Q 026423 204 ---HRLPEELTLLHSAVMRQNYGEPMIFISLNK 233 (238)
Q Consensus 204 ---~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~ 233 (238)
.....+.||+++|+..|+.+++++|+++|.
T Consensus 311 ~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 311 PTATIPGDANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp SCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred ccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH
Confidence 112345678999999999999999998864
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=2.5e-29 Score=169.09 Aligned_cols=131 Identities=15% Similarity=0.207 Sum_probs=109.2
Q ss_pred hccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCc
Q 026423 52 QNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPE 131 (238)
Q Consensus 52 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 131 (238)
.++ +..+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+. ++.+++++|+++++++.
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-------- 71 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLLE-AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-------- 71 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS--------
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC--------
Confidence 455 6677888888888888888888888884 567778888888888888888 88888888888887654
Q ss_pred ccccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 132 SLLRITDDE-GNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 132 ~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
.++.. |.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++|
T Consensus 72 ----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 72 ----CADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp ----CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 46667 888888888888888888888888887 678888889999988888889999888877
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=3.5e-29 Score=172.32 Aligned_cols=133 Identities=14% Similarity=0.052 Sum_probs=117.7
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCcccc
Q 026423 90 RKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLG 169 (238)
Q Consensus 90 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 169 (238)
...+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+ .|+.+++++|++.|+++ +
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~ 71 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPN------------APNSYGRRPIQVMM-MGSARVAELLLLHGAEP-N 71 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT------------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-C
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-C
Confidence 4556789999999999999999999999987754 57889999999985 99999999999999988 7
Q ss_pred ccCCCCCC-HHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 170 YLNNAEQT-PLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 170 ~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
..+..|.| |||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++.+++++|+++|++++.
T Consensus 72 ~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 72 CADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred CcCCCCCcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 88999999 999999999999999999998 99999999999999999999999999999999999875
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=1e-29 Score=179.45 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=138.7
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCc----chHHHHHHcCccccccCCCCCCcHHHHHHHh
Q 026423 31 ELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNH----KVIPEILRRRDSLLRKNNWKGETPLHIAARV 106 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 106 (238)
+|+.|++.|+.+.++.++..+.+. ..+..|.||||+|+..++. +++++|+ ..+++++.++..|+||||+|+..
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHc
Confidence 599999999999999999877543 2236799999999999975 4899999 67889999999999999999999
Q ss_pred CC------HHHHHHHHhhCccccCCCCCCCcccccccCCCCC-cHHHHHHHcCC-----HHHHHHHHH-cCCccccccCC
Q 026423 107 GD------PAIVSTILKYAPAITNGTESEPESLLRITDDEGN-TPLHNAVRNKH-----ENVVRMLVK-KDRIPLGYLNN 173 (238)
Q Consensus 107 ~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~a~~~~~-----~~~~~~ll~-~~~~~~~~~~~ 173 (238)
++ .+++++|+++|+++. .+|..|. ||||+|+..+. .+++++|++ .|+++ +.+|.
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin------------~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~ 152 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADIT------------ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDK 152 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSS------------SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCT
T ss_pred CCcchhhHHHHHHHHHHCCCCCC------------ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCC
Confidence 87 588999999998865 6788999 99999998543 569999999 89998 89999
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCC
Q 026423 174 AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRL 206 (238)
Q Consensus 174 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 206 (238)
.|.||||+|++.|+.+++++|.+.. ...+.++
T Consensus 153 ~G~TpL~~A~~~~~~~~v~~L~~~~-~~~~~~~ 184 (186)
T 3t8k_A 153 WGLTALEFVKRCQKPIALKMMEDYI-KKYNLKE 184 (186)
T ss_dssp TSCCHHHHHHTTTCHHHHHHHHHHH-HHHTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHHH-HHHhccc
Confidence 9999999999999999999999876 5566554
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=2e-28 Score=164.61 Aligned_cols=125 Identities=22% Similarity=0.202 Sum_probs=89.0
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCC
Q 026423 94 WKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNN 173 (238)
Q Consensus 94 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 173 (238)
..+.||||+|+..|+.+++++|+++++++. ..+..|.||||+|+..++.+++++|++.|+++ +..+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~ 78 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVN------------AKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDA 78 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCC------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC
Confidence 345667777777777777777777665533 45666777777777777777777777777666 56667
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcc
Q 026423 174 AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLN 232 (238)
Q Consensus 174 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g 232 (238)
.|.||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+..++.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7777777777777777777777776 777777777777777777777777777777765
No 88
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.7e-30 Score=201.83 Aligned_cols=179 Identities=11% Similarity=0.018 Sum_probs=145.1
Q ss_pred HHHHHHH-cCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccc--cccCCCCCCcHHHHHHHhC
Q 026423 31 ELLNVLR-RGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSL--LRKNNWKGETPLHIAARVG 107 (238)
Q Consensus 31 ~l~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~~~l~~a~~~~ 107 (238)
++++|.. .++.+.+++++++|.+. .||||+|+..|+.+++++|++.+... .+..+..|.||||+|+..|
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~--------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS--------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH--------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc--------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 4666665 57888999999887765 59999999999999999999544311 1123446788999999999
Q ss_pred CHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccc--cCCCCCCHHHHHH-H
Q 026423 108 DPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY--LNNAEQTPLSIAI-D 184 (238)
Q Consensus 108 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~g~t~l~~a~-~ 184 (238)
+.+++++|+++|++... .+..+.. .||||+|+..|+.+++++|+++|+++ .. .+..|.||||+|+ .
T Consensus 140 ~~eiv~~Ll~~gad~~~---------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIM---------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp CHHHHHHHHHSCTTTHH---------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHhCCCCccc---------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHH
Confidence 99999999999963110 0011222 89999999999999999999999986 34 6788999999999 9
Q ss_pred cCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 185 SSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 185 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
.|+.+++++|++.| ++ |.||+++|+..|+.+++++|+++|++++
T Consensus 209 ~G~~eiv~~Ll~~g-a~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 209 RGHHNVINFLLDCP-VM-------LAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp TCCHHHHHHHTTSH-HH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCC-Cc-------cchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 99999999999966 32 7899999999999999999999998763
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.9e-27 Score=159.81 Aligned_cols=126 Identities=22% Similarity=0.241 Sum_probs=79.1
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD 138 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 138 (238)
...+.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..++.+++++|+++++++. ..+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~d 77 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMA-NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN------------AVD 77 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCC
T ss_pred cccccHHHHHHHHhCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------cCC
Confidence 3445666666666666666666663 445556666666666666666666666666666665433 355
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 139 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 139 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.|
T Consensus 78 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 78 AIGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 56666666666666666666666666665 556666666666666666666666666543
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=5.3e-27 Score=155.46 Aligned_cols=123 Identities=29% Similarity=0.470 Sum_probs=82.7
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCC
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEG 141 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (238)
|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+++++++. ..+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~g 68 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN------------AKDKNG 68 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTS
T ss_pred CccHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc------------ccCCCC
Confidence 5666666666666666666663 445556666666777777777777777777776665533 455666
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 142 NTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 142 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
.||||+|+..++.+++++|++.|+++ +..+..|.||+++|+..|+.+++++|+++|
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 77777777777777777777776666 566667777777777777777777777666
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=8.5e-28 Score=161.79 Aligned_cols=129 Identities=24% Similarity=0.246 Sum_probs=87.9
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccc
Q 026423 91 KNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 170 (238)
Q Consensus 91 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 170 (238)
.++..|.||||+|+..|+.+++++|+++++++. ..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN------------VKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cC
Confidence 455667777777777777777777777665533 45666777777777777777777777777666 56
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccc
Q 026423 171 LNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNK 233 (238)
Q Consensus 171 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~ 233 (238)
.+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||+++|+..+..+++++|.+.+.
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 6677777777777777777777777776 7777777777777777777777777766665543
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=1.6e-26 Score=163.11 Aligned_cols=140 Identities=18% Similarity=0.100 Sum_probs=114.9
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD 138 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 138 (238)
+..|.||||+|+..|+.+++++|++ +.+++.++..|.||||+|+..|+.+++++|+++|+++. ..+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~------------~~~ 106 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRD 106 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------cCC
Confidence 4567889999999999999998885 67788888889999999999999999999998887754 344
Q ss_pred -CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 026423 139 -DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAV 217 (238)
Q Consensus 139 -~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~ 217 (238)
..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|++.++. ..+.+++++|+
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~ 167 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGR 167 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHH
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHH
Confidence 77889999999999999999999888887 67888899999988764321 24568999999
Q ss_pred HhcCcchhHHhhhc
Q 026423 218 MRQNYGEPMIFISL 231 (238)
Q Consensus 218 ~~~~~~~~~~L~~~ 231 (238)
..|..+++++|.++
T Consensus 168 ~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 168 RIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HcCHHHHHHHHHHh
Confidence 99999998888765
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=9.5e-27 Score=171.55 Aligned_cols=141 Identities=17% Similarity=0.080 Sum_probs=96.5
Q ss_pred CCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC-
Q 026423 60 PRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD- 138 (238)
Q Consensus 60 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~- 138 (238)
..|.||||+|+..|+.+++++|++ +.+++.++..|.||||+|+..|+.+++++|+++|+++. ..+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------------~~~~ 108 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRDM 108 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCS
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------------cCCC
Confidence 456777777777777777777774 55667777777777777777777777777777776643 234
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 026423 139 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVM 218 (238)
Q Consensus 139 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~ 218 (238)
..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..+. ...+.|||++|+.
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~ 169 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGRR 169 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHH
Confidence 56777777777777777777777777766 5667777777777764211 1345677777777
Q ss_pred hcCcchhHHhhhccc
Q 026423 219 RQNYGEPMIFISLNK 233 (238)
Q Consensus 219 ~~~~~~~~~L~~~g~ 233 (238)
.|+.+++++|++++.
T Consensus 170 ~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 170 IGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHHHHHE
T ss_pred cChHHHHHHHHHhcc
Confidence 777777777776543
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=5.9e-27 Score=157.64 Aligned_cols=128 Identities=23% Similarity=0.326 Sum_probs=106.7
Q ss_pred ccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccc
Q 026423 57 TMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRI 136 (238)
Q Consensus 57 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 136 (238)
..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++++++. .
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN------------T 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------C
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc------------C
Confidence 45778899999999999999999998 4667788888889999999999999999999998887644 5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 137 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 137 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
.+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||+++|+..+..+++++|.+.+
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 6778899999999999999999999998887 788899999999998888888877776554
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=4.5e-26 Score=172.63 Aligned_cols=143 Identities=20% Similarity=0.215 Sum_probs=117.7
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCcccccc------CCCCCCcHHHHHHHh---CCHHHHHHHHhhCccccCCCCCC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRK------NNWKGETPLHIAARV---GDPAIVSTILKYAPAITNGTESE 129 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~------~~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~ 129 (238)
.....++|+.|+..|+.+.++.|+ ..+.+++. .+..|.||||+|+.. ++.+++++|+++|+++.
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn------ 220 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD------ 220 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT------
T ss_pred cCchHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC------
Confidence 445678999999999999999999 45556665 588899999999987 88999999999997754
Q ss_pred CcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCC
Q 026423 130 PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEE 209 (238)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 209 (238)
..+..|.||||+|+..|+.+++++|++.|+++ +..|..|.|||++|+..|+.+++++|++.| ++ .|
T Consensus 221 ------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a~------~g 286 (301)
T 2b0o_E 221 ------AKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQ-AG------TF 286 (301)
T ss_dssp ------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-HH------TT
T ss_pred ------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-CC------CC
Confidence 57889999999999999999999999999988 788999999999999999999999999988 55 47
Q ss_pred CcHHHHHHHhcCc
Q 026423 210 LTLLHSAVMRQNY 222 (238)
Q Consensus 210 ~t~l~~A~~~~~~ 222 (238)
.||||+|+..|+.
T Consensus 287 ~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 287 AFPLHVDYSWVIS 299 (301)
T ss_dssp SSCCC--------
T ss_pred CChhHHHHhcCCc
Confidence 8999999988763
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.3e-26 Score=168.53 Aligned_cols=129 Identities=19% Similarity=0.148 Sum_probs=74.1
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCccccccC
Q 026423 94 WKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK-DRIPLGYLN 172 (238)
Q Consensus 94 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~ 172 (238)
..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++. |+++ +..+
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d 137 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVN------------GLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQN 137 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCC
T ss_pred cccccccccccccCcHHHHHHHHhCCCCcc------------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccC
Confidence 345566666666666666666666554432 3455666666666666666666666665 5544 5566
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccC
Q 026423 173 NAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLS 236 (238)
Q Consensus 173 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~ 236 (238)
..|.||||+|+..|+.+++++|++.| ++++.+|..|.|||++|+..++.++++.|++.|+..+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 66666666666666666666666665 6666666666666666666666666666666665544
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.4e-25 Score=158.33 Aligned_cols=138 Identities=19% Similarity=0.299 Sum_probs=123.5
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCC-CCCCcHHHHHHH
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNN-WKGETPLHIAAR 105 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~~~l~~a~~ 105 (238)
.+.+|||.|+..|+.++++.|++ |.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++ ..|.||||+|+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHh
Confidence 45679999999999999999999 9998 889999999999999999999999999 5677788777 889999999999
Q ss_pred hCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHc
Q 026423 106 VGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDS 185 (238)
Q Consensus 106 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 185 (238)
.|+.+++++|+++|+++. .++..|.||||+|++.++ ...+.+++++|++.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~------------~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~ 169 (183)
T 3deo_A 120 YVRPEVVEALVELGADIE------------VEDERGLTALELAREILK------------------TTPKGNPMQFGRRI 169 (183)
T ss_dssp TTCHHHHHHHHHHTCCTT------------CCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCc------------CCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHc
Confidence 999999999999997754 688899999999987431 24567999999999
Q ss_pred CcHHHHHHHHhc
Q 026423 186 SLTDIACFIIDQ 197 (238)
Q Consensus 186 ~~~~~~~~Ll~~ 197 (238)
|+.+++++|.++
T Consensus 170 ~~~~i~~~L~~~ 181 (183)
T 3deo_A 170 GLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHTC
T ss_pred CHHHHHHHHHHh
Confidence 999999999865
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=5.9e-26 Score=149.88 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=79.9
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCC
Q 026423 94 WKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNN 173 (238)
Q Consensus 94 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 173 (238)
..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..++.+++++|++.|+++ +..+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~ 71 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVN------------RTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDK 71 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTT------------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcC------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC
Confidence 456677777777777777777777765533 45667777777777777777777777777766 56777
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 026423 174 AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVM 218 (238)
Q Consensus 174 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~ 218 (238)
.|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|..
T Consensus 72 ~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 72 HHITPLLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhCC
Confidence 7777777777777777777777776 7777777777777777743
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=170.52 Aligned_cols=133 Identities=13% Similarity=-0.008 Sum_probs=117.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCcccccc
Q 026423 95 KGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRN---KHENVVRMLVKKDRIPLGYL 171 (238)
Q Consensus 95 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~ 171 (238)
...++|+.|+..|+.+.++.|+..++++..... ....+..|.||||+|+.. ++.+++++|++.|+++ +..
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~ 222 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAK 222 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCC------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCC
Confidence 345789999999999999999999988654210 002467899999999997 8999999999999988 788
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 172 NNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 172 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
|..|.||||+|+..|+.+++++|++.| ++++.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 223 d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 223 AADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999998 999999999999999999999999999999999864
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.6e-25 Score=164.96 Aligned_cols=139 Identities=19% Similarity=0.286 Sum_probs=124.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCC-CCCCcHHHHHHH
Q 026423 27 TMDHELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNN-WKGETPLHIAAR 105 (238)
Q Consensus 27 ~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~~~l~~a~~ 105 (238)
.+.+|||.|+..|+.+++++|++ |.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++ ..|.||||+|+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHH
Confidence 45679999999999999999999 9998 889999999999999999999999999 5677787777 789999999999
Q ss_pred hCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHc
Q 026423 106 VGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDS 185 (238)
Q Consensus 106 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 185 (238)
.|+.+++++|+++|+++. ..+..|.||||+|+..+ ....+.||+++|+..
T Consensus 121 ~g~~~~v~~Ll~~ga~~~------------~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIE------------VEDERGLTALELAREIL------------------KTTPKGNPMQFGRRI 170 (244)
T ss_dssp TTCHHHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC------------CCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHc
Confidence 999999999999998754 68889999999998522 235688999999999
Q ss_pred CcHHHHHHHHhcC
Q 026423 186 SLTDIACFIIDQR 198 (238)
Q Consensus 186 ~~~~~~~~Ll~~~ 198 (238)
|+.+++++|++.+
T Consensus 171 g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 171 GLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhc
Confidence 9999999999863
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=5.9e-26 Score=165.07 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=110.0
Q ss_pred cCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhh-CccccCCCCCCCcccccc
Q 026423 58 MSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKY-APAITNGTESEPESLLRI 136 (238)
Q Consensus 58 ~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~ 136 (238)
.+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+.+++++|++. ++++. .
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~------------~ 135 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN------------Q 135 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC------------C
T ss_pred cccccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc------------c
Confidence 3556889999999999999999999 46778889999999999999999999999999998 76643 6
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCC
Q 026423 137 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEE 209 (238)
Q Consensus 137 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 209 (238)
.+..|.||||+|+..|+.+++++|++.|+++ +..+..|.|||++|+..+..++++.|+..+ +..+..+..+
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~-~~~~~~~~~~ 206 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTD-AVRTLSNAED 206 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccc-hhhhccchhh
Confidence 7889999999999999999999999999988 788999999999999999999999999988 7766666544
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=3.3e-25 Score=166.10 Aligned_cols=132 Identities=15% Similarity=0.038 Sum_probs=119.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCccccccC
Q 026423 96 GETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRN---KHENVVRMLVKKDRIPLGYLN 172 (238)
Q Consensus 96 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~ 172 (238)
..++|+.|+..++.+.++.++..|.+.... ..++..+..|.||||+|+.. ++.+++++|+++|+++ +..|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~------~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d 202 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEK------IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQT 202 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSB------CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhh------ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccC
Confidence 346899999999999999999998765321 11445678899999999999 8999999999999998 7899
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhccccc
Q 026423 173 NAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCL 235 (238)
Q Consensus 173 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~ 235 (238)
..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999998 999999999999999999999999999999999863
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3e-25 Score=146.45 Aligned_cols=111 Identities=20% Similarity=0.229 Sum_probs=72.0
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccC
Q 026423 59 SPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITD 138 (238)
Q Consensus 59 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 138 (238)
+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..++.+++++|+++++++. .++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~d 70 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN------------APD 70 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT------------CCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC------------cCC
Confidence 3456666777776666677766663 445566666666777777777777777777776665533 456
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHH
Q 026423 139 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAI 183 (238)
Q Consensus 139 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 183 (238)
..|.||||+|+..++.+++++|++.|+++ +..+..|.||+++|.
T Consensus 71 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATD 114 (123)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhC
Confidence 66677777777777777777777776665 566667777777663
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.6e-24 Score=135.85 Aligned_cols=93 Identities=23% Similarity=0.325 Sum_probs=88.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 026423 140 EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMR 219 (238)
Q Consensus 140 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~ 219 (238)
+|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 4789999999999999999999999988 789999999999999999999999999999 99999999999999999999
Q ss_pred cCcchhHHhhhcccc
Q 026423 220 QNYGEPMIFISLNKC 234 (238)
Q Consensus 220 ~~~~~~~~L~~~g~~ 234 (238)
++.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999985
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=6.2e-24 Score=171.63 Aligned_cols=133 Identities=13% Similarity=-0.006 Sum_probs=117.0
Q ss_pred CcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHH---cCCHHHHHHHHHcCCccccccCC
Q 026423 97 ETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVR---NKHENVVRMLVKKDRIPLGYLNN 173 (238)
Q Consensus 97 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~ 173 (238)
.+.|+.|+..|+.+.++.|++.|+++..... ....+..|.||||+|++ .|+.+++++|+++|+++ +..|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~ 205 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLP------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAA 205 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCS
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCC------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCC
Confidence 3679999999999999999999987653210 11237789999999976 89999999999999988 88999
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccccCC
Q 026423 174 AEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 174 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
.|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999 99999999999999999999999999999999999874
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=6.1e-24 Score=164.49 Aligned_cols=163 Identities=17% Similarity=0.182 Sum_probs=108.4
Q ss_pred CCCchHHHHHHHc-CCcchHHHHHHcCccccccCC--CCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccc
Q 026423 60 PRGNTVLHMAIRF-RNHKVIPEILRRRDSLLRKNN--WKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRI 136 (238)
Q Consensus 60 ~~g~t~L~~a~~~-~~~~~~~~Ll~~~~~~~~~~~--~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 136 (238)
..+.|+||+|+.. ++.+++++|+ ..+.+++..+ ..|.||||+|+..|+.+++++|+++|+++. .
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn------------~ 263 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN------------Q 263 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------------C
T ss_pred CCCCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------------C
Confidence 3456799999998 9999999999 5667777777 788999999999999999999999887754 5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCC--cccccCCCCCCcHHH
Q 026423 137 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRP--ESLNHRLPEELTLLH 214 (238)
Q Consensus 137 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~--~~~~~~~~~g~t~l~ 214 (238)
.+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+..+. .+....+..+.|+++
T Consensus 264 ~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~ 342 (368)
T 3jue_A 264 ADSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLD 342 (368)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHH
Confidence 7788999999999999999999999999888 7888899999999999999999999987652 223344556778888
Q ss_pred HHHHhcC--cchhHHhhhcccccC
Q 026423 215 SAVMRQN--YGEPMIFISLNKCLS 236 (238)
Q Consensus 215 ~A~~~~~--~~~~~~L~~~g~~~~ 236 (238)
++..... .+-.+.|...+.+++
T Consensus 343 i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 343 IFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp ------------------------
T ss_pred HHHHHHhhcCCCHHHHHhcCCCcC
Confidence 7766543 344566666666554
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=2.1e-23 Score=161.45 Aligned_cols=127 Identities=17% Similarity=0.138 Sum_probs=117.2
Q ss_pred CCCCcHHHHHHHh-CCHHHHHHHHhhCccccCCCCCCCcccccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCccccc
Q 026423 94 WKGETPLHIAARV-GDPAIVSTILKYAPAITNGTESEPESLLRITD--DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 170 (238)
Q Consensus 94 ~~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 170 (238)
..+.++||.|+.. ++.++++.|+++|+++. ..+ ..|.||||+|+..|+.+++++|+++|+++ +.
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn------------~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~ 263 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVN------------WVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQ 263 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTT------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCC------------ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CC
Confidence 3456799999999 99999999999998765 344 78999999999999999999999999998 78
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhcCcchhHHhhhcccc
Q 026423 171 LNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHSAVMRQNYGEPMIFISLNKC 234 (238)
Q Consensus 171 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~g~~ 234 (238)
.|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..++.+++++|++.|..
T Consensus 264 ~d~~G~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 264 ADSAGRGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999 99999999999999999999999999999988743
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=4.9e-23 Score=166.39 Aligned_cols=129 Identities=20% Similarity=0.233 Sum_probs=113.5
Q ss_pred CchHHHHHHHcCCcchHHHHHHcCccccccC------CCCCCcHHHHHHH---hCCHHHHHHHHhhCccccCCCCCCCcc
Q 026423 62 GNTVLHMAIRFRNHKVIPEILRRRDSLLRKN------NWKGETPLHIAAR---VGDPAIVSTILKYAPAITNGTESEPES 132 (238)
Q Consensus 62 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~------~~~g~~~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~ 132 (238)
..+.||.|+..|+.+.++.|++ .+.+++.. +..|.||||+|+. .|+.+++++|+++|++++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~-~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn--------- 201 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD--------- 201 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHH-TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT---------
T ss_pred cHHHHHHHHhccCHHHHHHHHh-hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC---------
Confidence 4478999999999999999994 56677766 7889999999977 899999999999998755
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccC
Q 026423 133 LLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHR 205 (238)
Q Consensus 133 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 205 (238)
.++..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 202 ---~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~ 269 (497)
T 3lvq_E 202 ---AKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQ-AGTFAF 269 (497)
T ss_dssp ---CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHTC-C-----
T ss_pred ---ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCCC
Confidence 67889999999999999999999999999998 789999999999999999999999999999 887764
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.5e-22 Score=151.71 Aligned_cols=147 Identities=18% Similarity=0.187 Sum_probs=113.3
Q ss_pred CHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccc-----cccCCCCCCcHHHHHHHh---CCHHH
Q 026423 40 DEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSL-----LRKNNWKGETPLHIAARV---GDPAI 111 (238)
Q Consensus 40 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~~~l~~a~~~---~~~~~ 111 (238)
++-..+++................++|+.|+..++.+.+..++..+... ++..+..|.||||+|+.. ++.++
T Consensus 108 ~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~ 187 (278)
T 1dcq_A 108 DYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 187 (278)
T ss_dssp HHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHH
T ss_pred HHHHHHHHHhhcccccccccchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHH
Confidence 3334445544433332444445678888888888888888888543332 444577889999999988 88899
Q ss_pred HHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHH
Q 026423 112 VSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIA 191 (238)
Q Consensus 112 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 191 (238)
+++|+++|++++ .++..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++
T Consensus 188 v~~Ll~~ga~in------------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 188 VDFLVQNSGNLD------------KQTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp HHHHHHHCSCTT------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHCCCCcc------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHH
Confidence 999999887754 57788999999999999999999999998887 78888999999999999999999
Q ss_pred HHHHhcCC
Q 026423 192 CFIIDQRP 199 (238)
Q Consensus 192 ~~Ll~~~~ 199 (238)
++|++.|.
T Consensus 255 ~~Ll~~ga 262 (278)
T 1dcq_A 255 ELLTQALS 262 (278)
T ss_dssp HHHHHHHT
T ss_pred HHHHHcCC
Confidence 99998873
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.3e-22 Score=125.89 Aligned_cols=91 Identities=31% Similarity=0.521 Sum_probs=84.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCC
Q 026423 95 KGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNA 174 (238)
Q Consensus 95 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 174 (238)
+|+||||+|+..|+.+++++|+++|+++. .++..|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~ 67 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKN 67 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCC
Confidence 47899999999999999999999997754 67889999999999999999999999999998 788999
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcC
Q 026423 175 EQTPLSIAIDSSLTDIACFIIDQR 198 (238)
Q Consensus 175 g~t~l~~a~~~~~~~~~~~Ll~~~ 198 (238)
|.||||+|+..|+.+++++|++.|
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999988
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=7.7e-23 Score=133.23 Aligned_cols=109 Identities=26% Similarity=0.338 Sum_probs=82.9
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccc
Q 026423 91 KNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 170 (238)
Q Consensus 91 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 170 (238)
.+|..|.||||+|+..++.+++++|+++++++. ..+..|.||||+|+..++.+++++|++.|+++ +.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN------------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS------------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cc
Confidence 456677888888888888888888887776543 46677888888888888888888888887776 67
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHH
Q 026423 171 LNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLL 213 (238)
Q Consensus 171 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 213 (238)
.+..|.||||+|+..++.+++++|+++| ++++.++..|.+|-
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 7778888888888888888888888877 88888877777764
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=4.9e-23 Score=134.15 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=95.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 026423 136 ITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTLLHS 215 (238)
Q Consensus 136 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 215 (238)
.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|++.| ++++.+|..|.|||++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHH
Confidence 47889999999999999999999999999987 788999999999999999999999999998 9999999999999999
Q ss_pred HHHhcCcchhHHhhhcccccCC
Q 026423 216 AVMRQNYGEPMIFISLNKCLSI 237 (238)
Q Consensus 216 A~~~~~~~~~~~L~~~g~~~~~ 237 (238)
|+..++.+++++|+++|++++.
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCCc
Confidence 9999999999999999999863
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=2.5e-20 Score=120.20 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=84.9
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCccccccCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccCCCCCCcH
Q 026423 133 LLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLTDIACFIIDQRPESLNHRLPEELTL 212 (238)
Q Consensus 133 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 212 (238)
.....+..|.|+||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tp 93 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTA 93 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcH
Confidence 34457789999999999999999999999999988 788999999999999999999999999998 9999999999999
Q ss_pred HHHHHHhcCcchhHHh
Q 026423 213 LHSAVMRQNYGEPMIF 228 (238)
Q Consensus 213 l~~A~~~~~~~~~~~L 228 (238)
||+|+..++.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=4.8e-19 Score=114.18 Aligned_cols=92 Identities=27% Similarity=0.346 Sum_probs=60.9
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCcccc
Q 026423 90 RKNNWKGETPLHIAARVGDPAIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLG 169 (238)
Q Consensus 90 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 169 (238)
...+..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++.|+++ +
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~------------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~ 84 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVA------------AKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-X 84 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-c
Confidence 3445566677777777777777777776665533 45666777777777777777777777777665 5
Q ss_pred ccCCCCCCHHHHHHHcCcHHHHHHH
Q 026423 170 YLNNAEQTPLSIAIDSSLTDIACFI 194 (238)
Q Consensus 170 ~~~~~g~t~l~~a~~~~~~~~~~~L 194 (238)
..+..|.||||+|+..|+.+++++|
T Consensus 85 ~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 6667777777777777777777665
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=61.71 E-value=35 Score=23.17 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCH
Q 026423 30 HELLNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDP 109 (238)
Q Consensus 30 ~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~ 109 (238)
+-|-.|+..|+.+....+.+..-+. ......=..|...|++++++....+.+.. ...+.+....|+.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l~~~-----~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~--------~~L~~Ly~~tg~~ 76 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKLNDS-----ITWERLIQEALAQGNASLAEMIYQTQHSF--------DKLSFLYLVTGDV 76 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHTTCH--------HHHHHHHHHHTCH
T ss_pred HHHHHHHhcCCHHHHHHHHHHhCCH-----HHHHHHHHHHHHcCChHHHHHHHHHhCCH--------HHHHHHHHHhCCH
Confidence 4589999999999887776642111 11223335677889999999888543321 1334455567887
Q ss_pred HHHHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHH-HHHHHHHcCCccccccCCCCCCHHHHHHHcCcH
Q 026423 110 AIVSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHEN-VVRMLVKKDRIPLGYLNNAEQTPLSIAIDSSLT 188 (238)
Q Consensus 110 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 188 (238)
+-++.+.+.. .........++.+-..|+.+ ++++|.+.|.-+ -+...|..+|..
T Consensus 77 e~L~kla~iA----------------~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~---------eA~~~A~t~g~~ 131 (177)
T 3mkq_B 77 NKLSKMQNIA----------------QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP---------LAYAVAKANGDE 131 (177)
T ss_dssp HHHHHHHHHH----------------HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH---------HHHHHHHHTTCH
T ss_pred HHHHHHHHHH----------------HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH---------HHHHHHHHcCcH
Confidence 7777665532 12233445677776777754 777777755433 255677778888
Q ss_pred HHHHHHHhcC
Q 026423 189 DIACFIIDQR 198 (238)
Q Consensus 189 ~~~~~Ll~~~ 198 (238)
++.+-+++.-
T Consensus 132 ~~a~~~~~~~ 141 (177)
T 3mkq_B 132 AAASAFLEQA 141 (177)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 8888887654
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=53.34 E-value=12 Score=18.02 Aligned_cols=19 Identities=11% Similarity=0.200 Sum_probs=15.0
Q ss_pred HHHHHHHcCCHHHHHHHHh
Q 026423 31 ELLNVLRRGDEHQISLIAG 49 (238)
Q Consensus 31 ~l~~A~~~~~~~~v~~Ll~ 49 (238)
.+..|+..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 4778888899988887754
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=50.51 E-value=29 Score=27.07 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=22.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026423 138 DDEGNTPLHNAVRNKHENVVRMLVKK 163 (238)
Q Consensus 138 ~~~~~~~l~~a~~~~~~~~~~~ll~~ 163 (238)
...|.|.+|.|++..+.+++..|+..
T Consensus 66 f~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 66 FDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp CCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cccCchhhhhhhhhhhhhHHHHhhhc
Confidence 35799999999999999999998864
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=46.07 E-value=43 Score=26.18 Aligned_cols=49 Identities=24% Similarity=0.364 Sum_probs=36.6
Q ss_pred HHHcCCHHHHHHHHhhhhcccccc-------------CCCCchHHHHHHHcCCcchHHHHHH
Q 026423 35 VLRRGDEHQISLIAGRMQNIFSTM-------------SPRGNTVLHMAIRFRNHKVIPEILR 83 (238)
Q Consensus 35 A~~~~~~~~v~~Ll~~~~~~~~~~-------------~~~g~t~L~~a~~~~~~~~~~~Ll~ 83 (238)
.+..|+...|+..+..|.++.... -..|.|.+|+|++..+.+++-.|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 455799999999999988772111 2347888888888888888887774
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=21.43 E-value=2e+02 Score=19.48 Aligned_cols=98 Identities=8% Similarity=0.023 Sum_probs=60.1
Q ss_pred HHHHHcCCHHHHHHHHhhhhccccccCCCCchHHHHHHHcCCcchHHHHHHcCccccccCCCCCCcHHHHHHHhCCH-HH
Q 026423 33 LNVLRRGDEHQISLIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRRRDSLLRKNNWKGETPLHIAARVGDP-AI 111 (238)
Q Consensus 33 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~-~~ 111 (238)
..|...|++++++.-..+-.|+ ...+.+....|+.+-+..+.+... ...+-...++.+...|+. ++
T Consensus 42 ~~AL~~gn~~lAe~cy~~~~D~--------~~L~~Ly~~tg~~e~L~kla~iA~-----~~g~~n~af~~~l~lGdv~~~ 108 (177)
T 3mkq_B 42 QEALAQGNASLAEMIYQTQHSF--------DKLSFLYLVTGDVNKLSKMQNIAQ-----TREDFGSMLLNTFYNNSTKER 108 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHTTCH--------HHHHHHHHHHTCHHHHHHHHHHHH-----HTTCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHcCChHHHHHHHHHhCCH--------HHHHHHHHHhCCHHHHHHHHHHHH-----HCccHHHHHHHHHHcCCHHHH
Confidence 4566678888888887766555 233444445677777766643111 111233567777777774 56
Q ss_pred HHHHHhhCccccCCCCCCCcccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026423 112 VSTILKYAPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKK 163 (238)
Q Consensus 112 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 163 (238)
++.|.+.+.- .-+...|..+|..+..+-+++.
T Consensus 109 i~lL~~~~r~--------------------~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 109 SSIFAEGGSL--------------------PLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHTTCH--------------------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHCCCh--------------------HHHHHHHHHcCcHHHHHHHHHH
Confidence 6777665411 1245667789999988887754
Done!