BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026426
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/238 (88%), Positives = 229/238 (96%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M+QKGLIYSFV+KGTVVLAEHT YSGNFSTIA+QCLQKLP +SSKYTYSCDGHTFNFL+D
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+GFVFLVVADES GRSVPFVFLERVK+DFK+RY ASI+N+E HPLAD+DEDDDLF DRFS
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
+AYNLDREFGP LKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
LVDKTENLQFQADSFQRQGRQLRR+MWLQ+LQMKLMV GAV +FI+IVW+VACGGFKC
Sbjct: 181 LVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 281 bits (719), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 181/238 (76%), Gaps = 19/238 (7%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M Q+ LIYSFV++GTV+LAE+T + GNF+++A QCLQKLP+S++K+TY+CDGHTFN+L D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+GF + VV ES GR +P FLERVK+DF +RYG + +
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGG-------------------KASTA 101
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
A +L++EFG +LKEHMQYC HPEE+SKLSK+KAQ+TEVKG+MM+NIEKVLDRGE+IEL
Sbjct: 102 KANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIEL 161
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
LVDKTENL+ QA F+ QG +++R++W +N+++KL+V G ++A I+I+ L C GFKC
Sbjct: 162 LVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 277 bits (708), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 183/238 (76%), Gaps = 19/238 (7%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M Q+ LIYSFV++GTV+L E+T + GNF+ +A QCLQKLP+S++K+TY+CDGHTFN+L++
Sbjct: 66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+GF + VVA ESVGR +P FLERVK+DF +RYG + +
Sbjct: 126 NGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGG-------------------KATTA 166
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
A +L+REFG +LKEHMQYC+ HP+E+SKL+K+KAQ+TEVKG+MM+NIEKVLDRGE+IEL
Sbjct: 167 QANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIEL 226
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
LVDKTENL+ QA F+ QG ++RR+MW +N+++KL+V G +I I+I+ L CGGFKC
Sbjct: 227 LVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/238 (56%), Positives = 181/238 (76%), Gaps = 19/238 (7%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M Q+ LIYSFV++GTV+L E T + GNF++IA QCLQKLP+S++K+TY+CDGHTFN+L++
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+GF + VVA +S GR +P FLERVK+DF +RYG + +
Sbjct: 61 NGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGG-------------------KAATA 101
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
A +L++EFG +LKEHMQYCM HP+E+SKL+K+KAQ++EVKG+MM+NIEKVLDRGE+IEL
Sbjct: 102 QANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIEL 161
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
LVDKTENL+ QA F+ QG Q+RR+MW QN+++KL+V +IA I+I+ L CGGF C
Sbjct: 162 LVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNC 219
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/238 (56%), Positives = 180/238 (75%), Gaps = 19/238 (7%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M Q+ LIYSFV++GTV+L E T + GNF++IA QCLQKLP+S++K+TY+CDGHTFN+L++
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
GF + VVA +S GR +P FLERVK+DF +RYG + +
Sbjct: 61 DGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGG-------------------KAATA 101
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
A +L++EFG +LKEHMQYCM HP+E+SKL+K+KAQ++EVKG+MM+NIEKVLDRGE+IEL
Sbjct: 102 QANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIEL 161
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
LVDKTENL+ QA F+ G Q+RR+MWLQN+++KL+V +IA I+I+ L C GFKC
Sbjct: 162 LVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 243 bits (620), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 171/239 (71%), Gaps = 20/239 (8%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASS-SKYTYSCDGHTFNFLL 59
M Q+ IYSFV++GT++LAE+T ++GNF +IA QCLQKLP+SS SK+TY+CD HTFNFL+
Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60
Query: 60 DSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRF 119
+ G+ + VVA +S+ + + FLERVK DFK+RYG +
Sbjct: 61 EDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGG-------------------KAST 101
Query: 120 SIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIE 179
+IA +L++EFGP +KEHM Y + H EE+ KL K+KAQ++EVK IM++NI+K +DRGE +
Sbjct: 102 AIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLT 161
Query: 180 LLVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
+L DKTENL+ QA +++QG Q+RR++W QN+++KL+V G ++ ++I+W+ C GF C
Sbjct: 162 VLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 23/238 (9%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M Q+ L YSF+++GTV+L E T + GNF+++A Q L+ LP+S++K+TY+CDGHTFN L++
Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+GF + VVA +S GR +P FLERVK+DF +RYG A D
Sbjct: 61 NGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGG-------EKAATDQ----------- 102
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
A +L++EFG LKEHMQYCM HP+E+S L+K KAQ++EVK +MM+NIEKVL RG E+
Sbjct: 103 -ANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEM 161
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFKC 238
L + Q +F + Q++R+ W QN+++KL+V +IA I+I+ L CGGF C
Sbjct: 162 LGSS----ESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNC 215
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 136/233 (58%), Gaps = 23/233 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPA--SSSKYTYSCDGHTFNFLLDSG 62
+I++ V++GTVVL+E ++ S N S+I+ Q L+KLP S S +YS D + F+ G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 63 FVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIA 122
L +ADE+ GR++PF FL+ + F + YG +I + + A
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQ--------------------A 101
Query: 123 YNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLV 182
Y+++ EF L + M++ + P ++S++K ++++V+ +M++NI+KVLDRGER+ELLV
Sbjct: 102 YSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLV 160
Query: 183 DKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGG 235
DKTEN+Q F++Q R+ R MW +N+++ + + + + I C G
Sbjct: 161 DKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 123/209 (58%), Gaps = 22/209 (10%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASS-SKYTYSCDGHTFNFLLDSGF 63
++Y+ V++GTVVL+E T+ S N STIA Q L+K+P + S +YS D + F+ G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 64 VFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAY 123
L +A+E+ GR +PF FLE + F + YG ++ ++AY
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHT--------------------ALAY 101
Query: 124 NLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVD 183
++ EF L + + Y + P +++++K ++ +V+G+M++NI+KVLDRGER+ELLVD
Sbjct: 102 AMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVD 160
Query: 184 KTENLQFQADSFQRQGRQLRRRMWLQNLQ 212
KT N+Q F++Q R+ R +W +N +
Sbjct: 161 KTANMQGNTFRFRKQARRFRSNVWWRNCK 189
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 135/233 (57%), Gaps = 23/233 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPA--SSSKYTYSCDGHTFNFLLDSG 62
++Y+ V++GTVVLAE ++ +GN + + L+KL S + +S D + F+ L G
Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDG 61
Query: 63 FVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIA 122
FL +A+++ GR VPF +LE + F + YG N A
Sbjct: 62 LTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAP--------------------A 101
Query: 123 YNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLV 182
Y ++ EF L + M++ S+P + L++++ +++E++ +M++NIEK+++RG+RIELLV
Sbjct: 102 YAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLV 160
Query: 183 DKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGG 235
DKT +Q + F++Q ++LRR +W++N ++ +++ ++ + I+ CGG
Sbjct: 161 DKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGG 213
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 6 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVF 65
+IYS V++G+ VLAE TS +GNF TI + L +P + +K +Y + + F++L+ +
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 66 LVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYNL 125
L +ADE GR +PF FL+ VK+ FK YG + + +IAY +
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMYGD--------------------KGKTAIAYGM 102
Query: 126 DREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNI-EKVLDRGERIELLVDK 184
+ +F L+ M + S+ + +S+ A+I EVK I++ +I ++L RGE+IE+LV++
Sbjct: 103 NSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVER 161
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFK 237
T+ L Q+ F++Q +QL+ MW +N+++ L++G V+ I I+ + C GF+
Sbjct: 162 TDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLIIIFIIVMSYCDGFR 214
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 130/231 (56%), Gaps = 22/231 (9%)
Query: 6 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASS-SKYTYSCDGHTFNFLLDSGFV 64
++Y+ V++GTVVLAE ++ S N STIA Q L+K+P + S +YS D + F+ G
Sbjct: 3 ILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLT 62
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
L +ADE GR +PF FLE + F + YG +I + + AY
Sbjct: 63 VLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQ--------------------AYA 102
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L + ++Y + P +S++K ++ +V+ +M++NI+ +LDRGER+ELLVDK
Sbjct: 103 MNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDK 161
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGG 235
T N+Q F++Q R+ +W +N ++ L++ ++ I I AC G
Sbjct: 162 TANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 128/232 (55%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL VK F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ V RGER+ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKH-HSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++N+++ +++ I FI I+ + CGGF
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCMKNIKLTIIIIIVSIVFIYIIVSLLCGGF 212
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 126/232 (54%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRII 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL +K F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L ++Y S + ++++ +AQ+ E+KGIM+ NI+ V RGE++ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKY-HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++NL++ +++ I I I+ ACGG
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSIVIIYIIVSAACGGL 212
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 127/232 (54%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL VK F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L +++ S + + ++++ +AQ+ E+KGIM+ NI+ V RGER+ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKH-HSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++N+++ ++ I FI I+ CGGF
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIVVVSIVFIYIIVSPLCGGF 212
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 127/232 (54%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL +K F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ V RGER+ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++NL++ +++ + FI I+ CGGF
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIISVVFIYIIVSPLCGGF 212
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 127/232 (54%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL +K F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ V RGER+ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++NL++ +++ I FI I+ CGGF
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGF 212
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 126/232 (54%), Gaps = 21/232 (9%)
Query: 5 GLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFV 64
++++ V++GT +LA+H GNF + Q L K+P+ ++K TY + F+++ V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIV 61
Query: 65 FLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYN 124
+L + D+ RS F FL +K F+ YG+ Q ++ Y
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYA 101
Query: 125 LDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDK 184
++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ V RGER+ELL+DK
Sbjct: 102 MNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDK 160
Query: 185 TENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGF 236
TENL + +F+ R L R M ++NL++ +++ I FI I+ CGGF
Sbjct: 161 TENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGF 212
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 23/237 (9%)
Query: 1 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
M+Q ++Y+ VS V L EH +GNF +A + + K+P +S K Y+ + H F+++ +
Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKK-IYTSENHNFHYISE 59
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
+ FL + E +G +P FL ++ F + YG S ++ P A D
Sbjct: 60 NDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSF--SQNSPTATYDP---------- 107
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180
F L+E M+Y S+P+ +K++ + Q++E KG + D IEK + RGE+IE+
Sbjct: 108 --------FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEI 157
Query: 181 LVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGAVIAFIIIVWLVACGGFK 237
+VDKTE LQ ++ F+ L+R++W QN ++ + +G V I ++ L FK
Sbjct: 158 IVDKTERLQSESFVFKSNSVALKRKLWWQNKKLAIAIGLVVCILIAVITLALLKYFK 214
>sp|P31109|SNC1_YEAST Synaptobrevin homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC1 PE=1 SV=1
Length = 117
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 129 FGP-RLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTEN 187
F P L EH + + + S+ ++L+A+I + GIM DNI KV +RGER+ + DK +N
Sbjct: 7 FDPYALSEHDEERPQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADN 66
Query: 188 LQFQADSFQRQGRQLRRRMWLQNLQMKL 215
L A F+R ++R+ MW ++L+MK+
Sbjct: 67 LAVSAQGFKRGANRVRKAMWYKDLKMKM 94
>sp|P33328|SNC2_YEAST Synaptobrevin homolog 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC2 PE=1 SV=2
Length = 115
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%)
Query: 129 FGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENL 188
+ P + ++P +K + L+ +I + GIM DNI KV +RGER+ + DK +NL
Sbjct: 7 YDPYVPPEESNSGANPNSQNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNL 66
Query: 189 QFQADSFQRQGRQLRRRMWLQNLQMKL 215
A F+R ++R++MW ++L+M++
Sbjct: 67 AISAQGFKRGANRVRKQMWWKDLKMRM 93
>sp|Q92356|SYB1_SCHPO Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=syb1 PE=3 SV=1
Length = 121
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
K + ++ QI + GIM +NI KV +RGER++ L DKT+NL A F+R ++R++MW
Sbjct: 31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWW 90
Query: 209 QNLQMK 214
++++M+
Sbjct: 91 KDMRMR 96
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 40 PASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQN 99
P S + + +TF++L+D+G +L + ++S R + F +LE + +F +G
Sbjct: 44 PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQ 103
Query: 100 EESHPLADDDEDDDLFEDRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITE 159
P A D F + YN P L KL ++ +
Sbjct: 104 PGLRPYA--FVQFDTFMQKSKRVYN------------------TPRANDNLDKLNTELKD 143
Query: 160 VKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLR-RRMWLQNLQMKLMVG 218
V +M NIE +L RG+ +E + D + +L++ + +++ R++ +W Q + ++
Sbjct: 144 VTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEALWRQYGPVSII-- 201
Query: 219 GAVIAFIIIVW 229
A++ I + W
Sbjct: 202 -ALLFLIFVYW 211
>sp|P18489|SYB_DROME Synaptobrevin OS=Drosophila melanogaster GN=Syb PE=2 SV=3
Length = 152
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 53/80 (66%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
KL + +A++ EV GIM N+EKVL+R +++ L ++ + L+ A F++Q +L+R+ W
Sbjct: 47 KLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWW 106
Query: 209 QNLQMKLMVGGAVIAFIIIV 228
N++M +++G + +IIV
Sbjct: 107 ANMKMMIILGVIAVVLLIIV 126
>sp|P35589|SYB_APLCA Synaptobrevin OS=Aplysia californica PE=2 SV=1
Length = 180
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 145 EEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRR 204
E+ +L + +AQ+ EV IM N+EKVLDR ++I L D+ E LQ A F+ +L+R
Sbjct: 17 EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKR 76
Query: 205 RMWLQNLQMKLMVGG 219
+ W +N +M L++G
Sbjct: 77 KYWWKNCKMMLILGA 91
>sp|Q32L97|VAMP4_BOVIN Vesicle-associated membrane protein 4 OS=Bos taurus GN=VAMP4 PE=2
SV=1
Length = 141
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
K+ ++ Q+ EV +M +NI KV++RGER++ L DK+E+L A +F + +QLRR+MW
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWW 111
Query: 209 QNLQMKLMV 217
+ ++K ++
Sbjct: 112 RGCKIKAIM 120
>sp|O75379|VAMP4_HUMAN Vesicle-associated membrane protein 4 OS=Homo sapiens GN=VAMP4 PE=1
SV=2
Length = 141
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
K+ ++ Q+ EV +M +NI KV++RGER++ L DK+E+L A +F + +QLRR+MW
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWW 111
Query: 209 QNLQMKLMV 217
+ ++K ++
Sbjct: 112 RGCKIKAIM 120
>sp|O70480|VAMP4_MOUSE Vesicle-associated membrane protein 4 OS=Mus musculus GN=Vamp4 PE=1
SV=1
Length = 141
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
K+ ++ Q+ EV +M +NI KV++RGER++ L DK+E+L A +F + +QLRR+MW
Sbjct: 52 KIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWW 111
Query: 209 QNLQMK 214
+ ++K
Sbjct: 112 RGCKIK 117
>sp|Q12255|NYV1_YEAST Vacuolar v-SNARE NYV1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NYV1 PE=1 SV=2
Length = 253
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 156 QITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKL 215
QI +V IM DNI+K L+R ER+ LLVDKT L ++ F+R+ ++ MW Q ++
Sbjct: 174 QIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQKVKNIT 233
Query: 216 MVGGAVIAFI 225
++ +I F+
Sbjct: 234 LLTFTIILFV 243
>sp|Q84WF5|VAMPL_ARATH Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana
GN=At1g33475 PE=2 SV=1
Length = 255
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 32/258 (12%)
Query: 3 QKGLIYSFVSKGTVVLAEHTSYSG--NFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLD 60
Q + Y VS+ ++ + + N ++A CL+K P Y + TF FL+
Sbjct: 5 QNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGFLMK 64
Query: 61 SGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFS 120
FV+ + D+ +S FLE+++D+ K+ + + S ++ + D + R
Sbjct: 65 DDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSGSISFSNVQDQIVR-RLI 123
Query: 121 IAYNLDREFGPRLKEHMQYCMSHPE----EMSKLSKLKAQI----------------TEV 160
+ D P +S P E S S KA + +
Sbjct: 124 ASLEFDHTCLP---------LSSPSIDGAEQSYASNSKAPLLGRSNKQDKKKGRDHAHSL 174
Query: 161 KGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWLQNLQMKLMVGGA 220
+GI ++ K DRG E +E+ + + G Q R W + +++ L + A
Sbjct: 175 RGIEIEEHRKSNDRGNVTECSNASSESATYVPRRGRSGGSQSIERKWRRQVKIVLAIDIA 234
Query: 221 VIAFIIIVWLVACGGFKC 238
+ ++ VWL C G +C
Sbjct: 235 ICLTLLGVWLAICHGIEC 252
>sp|Q5REQ5|VAMP8_PONAB Vesicle-associated membrane protein 8 OS=Pongo abelii GN=VAMP8 PE=3
SV=1
Length = 100
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 48/69 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
++ L++++ VK IM N+E++L RGE +E L +KTE+L+ ++ F+ +++ R+ W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 209 QNLQMKLMV 217
+N++M +++
Sbjct: 72 KNVKMIVLI 80
>sp|Q9BV40|VAMP8_HUMAN Vesicle-associated membrane protein 8 OS=Homo sapiens GN=VAMP8 PE=1
SV=1
Length = 100
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 48/69 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
++ L++++ VK IM N+E++L RGE +E L +KTE+L+ ++ F+ +++ R+ W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 209 QNLQMKLMV 217
+N++M +++
Sbjct: 72 KNVKMIVLI 80
>sp|Q0V7N0|VAMP1_BOVIN Vesicle-associated membrane protein 1 OS=Bos taurus GN=VAMP1 PE=3
SV=2
Length = 118
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 209 QNLQMKLMVGG 219
+N +M +M+G
Sbjct: 93 KNCKMMIMLGA 103
>sp|Q62442|VAMP1_MOUSE Vesicle-associated membrane protein 1 OS=Mus musculus GN=Vamp1 PE=1
SV=1
Length = 118
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 209 QNLQMKLMVGG 219
+N +M +M+G
Sbjct: 93 KNCKMMIMLGA 103
>sp|Q63666|VAMP1_RAT Vesicle-associated membrane protein 1 OS=Rattus norvegicus GN=Vamp1
PE=1 SV=2
Length = 118
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWW 92
Query: 209 QNLQMKLMVGG 219
+N +M +M+G
Sbjct: 93 KNCKMMIMLGA 103
>sp|Q60WU2|SYB1_CAEBR Synaptobrevin-1 OS=Caenorhabditis briggsae GN=snb-1 PE=3 SV=1
Length = 108
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV GIM N+EKVL+R +++ L D+ + LQ A F++ L+R+ W
Sbjct: 22 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 81
Query: 209 QNLQMKLMV 217
+N++M +++
Sbjct: 82 KNIKMMIIM 90
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 32 AIQCLQKL-PASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFK 90
A Q +KL S ++ T TF++L++ G +LV+ + + + + F +LE + +F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFD 96
Query: 91 QRYGASIQNEESHPLADDDEDDDLFEDRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKL 150
+++G + S P + + D+ + + + S + R L
Sbjct: 97 EQHGKKVPT-VSRPYSFIEFDNYIQKTKKSYIDSRARR--------------------NL 135
Query: 151 SKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWLQN 210
S + ++ +V+ IM+ NIE+VL RGE + L K NL + +++ + L R
Sbjct: 136 SSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYRQDAKYLNMRSTYAK 195
Query: 211 LQMKLMVGGAVIAFIIIVWL 230
L + +I +I WL
Sbjct: 196 LAAVAVFSVMLIVYIRFWWL 215
>sp|O02495|SYB1_CAEEL Synaptobrevin-1 OS=Caenorhabditis elegans GN=snb-1 PE=1 SV=1
Length = 109
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV GIM N+EKVL+R +++ L D+ + LQ A F++ L+R+ W
Sbjct: 23 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 82
Query: 209 QNLQMKLMV 217
+N++M +++
Sbjct: 83 KNIKMMIIM 91
>sp|P47194|SYB_DORPE Synaptobrevin OS=Doryteuthis pealeii PE=1 SV=1
Length = 125
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +I L D+ + LQ A F+ +L+R+ W
Sbjct: 40 RLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWW 99
Query: 209 QNLQMKLMVGG 219
+N +M +++GG
Sbjct: 100 KNCKMMIILGG 110
>sp|O70404|VAMP8_MOUSE Vesicle-associated membrane protein 8 OS=Mus musculus GN=Vamp8 PE=1
SV=1
Length = 101
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 45/65 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
++ L++++ VK IM N+E++L RGE ++ L +KTE+L+ ++ F+ +++ R+ W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 209 QNLQM 213
+N++M
Sbjct: 72 KNVKM 76
>sp|P23763|VAMP1_HUMAN Vesicle-associated membrane protein 1 OS=Homo sapiens GN=VAMP1 PE=1
SV=1
Length = 118
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV I+ N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 33 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 209 QNLQMKLMVGG 219
+N +M +M+G
Sbjct: 93 KNCKMMIMLGA 103
>sp|P63026|VAMP2_BOVIN Vesicle-associated membrane protein 2 OS=Bos taurus GN=VAMP2 PE=1
SV=2
Length = 116
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 209 QNLQMKLMVG 218
+NL+M +++G
Sbjct: 91 KNLKMMIILG 100
>sp|P63045|VAMP2_RAT Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2
PE=1 SV=2
Length = 116
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 209 QNLQMKLMVG 218
+NL+M +++G
Sbjct: 91 KNLKMMIILG 100
>sp|P63044|VAMP2_MOUSE Vesicle-associated membrane protein 2 OS=Mus musculus GN=Vamp2 PE=1
SV=2
Length = 116
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 209 QNLQMKLMVG 218
+NL+M +++G
Sbjct: 91 KNLKMMIILG 100
>sp|Q9N0Y0|VAMP2_MACMU Vesicle-associated membrane protein 2 OS=Macaca mulatta GN=VAMP2
PE=3 SV=3
Length = 116
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 209 QNLQMKLMVG 218
+NL+M +++G
Sbjct: 91 KNLKMMIILG 100
>sp|P63027|VAMP2_HUMAN Vesicle-associated membrane protein 2 OS=Homo sapiens GN=VAMP2 PE=1
SV=3
Length = 116
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
+L + +AQ+ EV IM N++KVL+R +++ L D+ + LQ A F+ +L+R+ W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 209 QNLQMKLMVG 218
+NL+M +++G
Sbjct: 91 KNLKMMIILG 100
>sp|Q9WUF4|VAMP8_RAT Vesicle-associated membrane protein 8 OS=Rattus norvegicus GN=Vamp8
PE=1 SV=1
Length = 100
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 45/65 (69%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
++ L++++ VK IM N+E++L RGE ++ L +KTE+L+ ++ F+ +++ R+ W
Sbjct: 11 RVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWW 70
Query: 209 QNLQM 213
+N++M
Sbjct: 71 KNVKM 75
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 28 FSTIAIQCLQKL-PASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVK 86
+ + A Q +KL S ++ T +F+++++ G +LV+ + + + F +LE ++
Sbjct: 33 YQSQAKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQ 92
Query: 87 DDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYNLDREFGPRLKEHMQYCMSHPEE 146
+F +++G + S P + + D + + + S + R
Sbjct: 93 AEFHEQHGKKVPTV-SRPYSFIEFDTYIQKTKKSYIDSRARR------------------ 133
Query: 147 MSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRM 206
LS + ++ +V+ IM+ NIE+VL RGE + L K NL + ++ + L R
Sbjct: 134 --NLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR- 190
Query: 207 WLQNLQMKLMVGGA----VIAFIIIVWL 230
+ KL GG +I +I WL
Sbjct: 191 ---STYAKLAAGGVFFIMLIVYIRFWWL 215
>sp|Q3T0Y8|VAMP8_BOVIN Vesicle-associated membrane protein 8 OS=Bos taurus GN=VAMP8 PE=2
SV=1
Length = 100
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%)
Query: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQLRRRMWL 208
++ L+ ++ VK IM N+E++L RGE ++ L +KTE+L+ ++ F+ +++ R+ W
Sbjct: 11 RVRNLRDEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWW 70
Query: 209 QNLQMKLMV 217
+N++M +++
Sbjct: 71 KNVKMIVLI 79
>sp|Q6C880|SEC22_YARLI Protein transport protein SEC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC22 PE=3 SV=1
Length = 213
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 27 NFSTIAIQC---LQKLPASSS-KYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFL 82
N S QC QKL A+S+ + + + ++L+ G V+ +++ S R + F +L
Sbjct: 26 NLSEQKKQCKLVTQKLSANSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYL 85
Query: 83 ERVKDDFKQRYGASIQNEESHPLADDDEDDDLFEDRFSIAYNLDREFGPRLKEHMQYCMS 142
+ + +F++ +G E P F + + R + H
Sbjct: 86 DELDREFQKSHGQEALKEGVRPYK--------FVEFDTFMQKTKRVYQDTRATH------ 131
Query: 143 HPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIELLVDKTENLQFQADSFQRQGRQL 202
L KL ++ +V +M NIE +L RG ++ + D + NL+ ++ ++R +++
Sbjct: 132 ------NLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQRI 185
Query: 203 RRRMWLQNLQMKLMVGGAVIAFIIIVWLV 231
++ Q +G +I ++ W++
Sbjct: 186 NWEAMIR--QYIPFIGVGLIGLFMLWWML 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,096,399
Number of Sequences: 539616
Number of extensions: 3547483
Number of successful extensions: 12185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12030
Number of HSP's gapped (non-prelim): 148
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)